BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024088
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359488064|ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263155 [Vitis vinifera]
Length = 801
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/270 (86%), Positives = 250/270 (92%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIENTRE DETVC+PDD+ELFAGNDADEFSSIL + PKILITTCRFNS RGPAFIS
Sbjct: 532 PRTIENTREFDETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFIS 591
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
ELLSVIPN+HYYKRGTYDLKKI+EYAK KDFTS+IVVHTNRREPDALLIIGLPDGPTAHF
Sbjct: 592 ELLSVIPNAHYYKRGTYDLKKIVEYAKIKDFTSLIVVHTNRREPDALLIIGLPDGPTAHF 651
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KLSKLVL KD+KNHGNPT HIPELVLNNF TRLGHR+GR+IQSLFPQ+P FRGRRVVTFH
Sbjct: 652 KLSKLVLHKDVKNHGNPTSHIPELVLNNFTTRLGHRIGRMIQSLFPQAPNFRGRRVVTFH 711
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRYIFE+KESK D G K KDAK EK+SQ KV+ RLQECGPRFTLKL++
Sbjct: 712 NQRDFIFFRHHRYIFESKESKQGDTKGNKDKDAKGEKSSQGKVVARLQECGPRFTLKLIN 771
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 772 LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 801
>gi|359480784|ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like [Vitis vinifera]
Length = 346
Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/270 (86%), Positives = 251/270 (92%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P TIENTRE DETVC+PDD+ELFAGNDADEFSSIL + PKILITTCRFNS RGPAFIS
Sbjct: 77 PHTIENTREFDETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFIS 136
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
ELLSVIPN+HYYKRGTYDLKKI+EYAKKKDFTS+IVVHTNRREPDALLIIGLPDGPTAHF
Sbjct: 137 ELLSVIPNAHYYKRGTYDLKKIVEYAKKKDFTSLIVVHTNRREPDALLIIGLPDGPTAHF 196
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KLSKLVLRKD+KNHGNPT HIPELVLNNF TRLGHR+GR+IQSLFPQ+P F GRRVVTFH
Sbjct: 197 KLSKLVLRKDVKNHGNPTSHIPELVLNNFTTRLGHRIGRMIQSLFPQAPNFGGRRVVTFH 256
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRYIFE+KESK D+ G K KDAK EK+S+ KV+ RLQECGPRFTLKL+S
Sbjct: 257 NQRDFIFFRHHRYIFESKESKQGDSKGNKDKDAKGEKSSRGKVVARLQECGPRFTLKLIS 316
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 317 LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 346
>gi|302143564|emb|CBI22317.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/270 (86%), Positives = 250/270 (92%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIENTRE DETVC+PDD+ELFAGNDADEFSSIL + PKILITTCRFNS RGPAFIS
Sbjct: 77 PRTIENTREFDETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFIS 136
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
ELLSVIPN+HYYKRGTYDLKKI+EYAK KDFTS+IVVHTNRREPDALLIIGLPDGPTAHF
Sbjct: 137 ELLSVIPNAHYYKRGTYDLKKIVEYAKIKDFTSLIVVHTNRREPDALLIIGLPDGPTAHF 196
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KLSKLVL KD+KNHGNPT HIPELVLNNF TRLGHR+GR+IQSLFPQ+P FRGRRVVTFH
Sbjct: 197 KLSKLVLHKDVKNHGNPTSHIPELVLNNFTTRLGHRIGRMIQSLFPQAPNFRGRRVVTFH 256
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRYIFE+KESK D G K KDAK EK+SQ KV+ RLQECGPRFTLKL++
Sbjct: 257 NQRDFIFFRHHRYIFESKESKQGDTKGNKDKDAKGEKSSQGKVVARLQECGPRFTLKLIN 316
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 317 LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 346
>gi|296082657|emb|CBI21662.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/270 (86%), Positives = 251/270 (92%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P TIENTRE DETVC+PDD+ELFAGNDADEFSSIL + PKILITTCRFNS RGPAFIS
Sbjct: 50 PHTIENTREFDETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFIS 109
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
ELLSVIPN+HYYKRGTYDLKKI+EYAKKKDFTS+IVVHTNRREPDALLIIGLPDGPTAHF
Sbjct: 110 ELLSVIPNAHYYKRGTYDLKKIVEYAKKKDFTSLIVVHTNRREPDALLIIGLPDGPTAHF 169
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KLSKLVLRKD+KNHGNPT HIPELVLNNF TRLGHR+GR+IQSLFPQ+P F GRRVVTFH
Sbjct: 170 KLSKLVLRKDVKNHGNPTSHIPELVLNNFTTRLGHRIGRMIQSLFPQAPNFGGRRVVTFH 229
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRYIFE+KESK D+ G K KDAK EK+S+ KV+ RLQECGPRFTLKL+S
Sbjct: 230 NQRDFIFFRHHRYIFESKESKQGDSKGNKDKDAKGEKSSRGKVVARLQECGPRFTLKLIS 289
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 290 LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 319
>gi|356559438|ref|XP_003548006.1| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1-like
[Glycine max]
Length = 354
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/271 (86%), Positives = 250/271 (92%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PRTIENTRE DETVC+PDDDELFAGNDADEF SIL Q PKILITTCRF+S RGPAFI
Sbjct: 84 VPRTIENTRELDETVCKPDDDELFAGNDADEFGSILNQQQTPKILITTCRFHSTRGPAFI 143
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
SELLSVIPN+HY+KRGTYDLKKI+EYAKKKDFTS+IVVHTNRREPDALLIIG+PDGPTAH
Sbjct: 144 SELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSVIVVHTNRREPDALLIIGVPDGPTAH 203
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FKLSKLVLRKDIKNHGNPTGH PELVLNNF TRLGHRVGRLIQSLFPQ PEF+GRRVVTF
Sbjct: 204 FKLSKLVLRKDIKNHGNPTGHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTF 263
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIFETKE K +++ GKK K+ KSE +QK I RLQECGPRFTLKL+
Sbjct: 264 HNQRDFIFFRHHRYIFETKEVKKTESKGKKDKEGKSENVPEQKTIARLQECGPRFTLKLI 323
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 324 SLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 354
>gi|363807176|ref|NP_001242604.1| uncharacterized protein LOC100785331 [Glycine max]
gi|255644450|gb|ACU22729.1| unknown [Glycine max]
Length = 354
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/271 (86%), Positives = 249/271 (91%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PRTIENTRE DETVC+PDD+ELFAGNDADEF IL Q PKILITTCRF+S RGPAFI
Sbjct: 84 VPRTIENTRELDETVCKPDDEELFAGNDADEFGPILNQQQTPKILITTCRFHSTRGPAFI 143
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
SELLSVIPN+HY+KRGTYDLKKI+EYAKKKDFTSIIVVHTNRREPDALLIIG+PDGPTAH
Sbjct: 144 SELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSIIVVHTNRREPDALLIIGVPDGPTAH 203
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FKLSKLVLRKDIKNHGNPTGH PELVLNNF TRLGHRVGRLIQSLFPQ PEF+GRRVVTF
Sbjct: 204 FKLSKLVLRKDIKNHGNPTGHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTF 263
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIFETKE K +++ GKK KD +SE +QK I RLQECGPRFTLKL+
Sbjct: 264 HNQRDFIFFRHHRYIFETKEVKKAESKGKKDKDGESENVPEQKTIARLQECGPRFTLKLI 323
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 324 SLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 354
>gi|82621156|gb|ABB86266.1| putative RNA processing factor 1-like [Solanum tuberosum]
Length = 335
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/272 (81%), Positives = 246/272 (90%), Gaps = 3/272 (1%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
M PRTIENTRE DETVC PDD+ELFAGND DEFS++LK +PKILITT R+NS RGPAF
Sbjct: 67 MVPRTIENTRESDETVCLPDDEELFAGNDVDEFSAVLKNERSPKILITTSRYNSTRGPAF 126
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
IS+L+SVIPN+HYYKRGTYDLKKI++YA +K+FTS+IVVHTNRREPDALL+IGLPDGPTA
Sbjct: 127 ISDLISVIPNAHYYKRGTYDLKKIVQYANEKEFTSVIVVHTNRREPDALLVIGLPDGPTA 186
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKL+LRKDIKNHG PT H PELVL NF TRLGHRVGR+IQSLFPQ PEFRGRRVVT
Sbjct: 187 HFKLSKLMLRKDIKNHGKPTSHKPELVLTNFTTRLGHRVGRMIQSLFPQDPEFRGRRVVT 246
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFRHHRYIFETKESK ++ GKK+KD EK Q++ I RLQECGPRFTLKL
Sbjct: 247 FHNQRDFIFFRHHRYIFETKESKQKESKGKKSKD---EKNPQERTIARLQECGPRFTLKL 303
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 304 ISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 335
>gi|224130720|ref|XP_002320911.1| predicted protein [Populus trichocarpa]
gi|222861684|gb|EEE99226.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/270 (85%), Positives = 244/270 (90%), Gaps = 1/270 (0%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIENTRE DETVC+PDD ELFAGNDADEFSS+LK+ PKILITT RFNS RGPAFIS
Sbjct: 102 PRTIENTREFDETVCKPDD-ELFAGNDADEFSSVLKRDRIPKILITTSRFNSTRGPAFIS 160
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
ELL VIPN+HYYKRGTYDLKKI+EYAKK+DFTS+IVVHTNRREPD LLIIGLPDGPTAHF
Sbjct: 161 ELLEVIPNAHYYKRGTYDLKKIVEYAKKQDFTSLIVVHTNRREPDGLLIIGLPDGPTAHF 220
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KLS+LVLRKDIK+HGNPT H PELVL NF T LGHR+GRLIQSLFPQ P FRGRRVVTFH
Sbjct: 221 KLSRLVLRKDIKSHGNPTSHEPELVLTNFTTCLGHRIGRLIQSLFPQEPNFRGRRVVTFH 280
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IFFRHHRYIFETKESK SD+ GK KD K EK +QQKVI RLQECGPRFTLKL S
Sbjct: 281 NQRDYIFFRHHRYIFETKESKQSDSKGKNRKDGKGEKNTQQKVIARLQECGPRFTLKLRS 340
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQH TFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 341 LQHETFDTKGGEYEWVHKPEMDTSRRRFFL 370
>gi|224068234|ref|XP_002302686.1| predicted protein [Populus trichocarpa]
gi|222844412|gb|EEE81959.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/270 (87%), Positives = 248/270 (91%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIENTRE DETVC+PDD+ELFAGNDADEFSSILK+ PKILITT RFNS RGPAFIS
Sbjct: 92 PRTIENTRENDETVCKPDDEELFAGNDADEFSSILKRERTPKILITTSRFNSTRGPAFIS 151
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
ELL VIPN+HYYKRGTYDLKKI+EYAKK+DFTS+IVVHTNRREPDALLIIGLPDGPTAHF
Sbjct: 152 ELLQVIPNAHYYKRGTYDLKKIVEYAKKQDFTSLIVVHTNRREPDALLIIGLPDGPTAHF 211
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KLS+LVLRKDIKNHGNPT H PELVL NF TRLGHR GR+IQSLFPQ P FRGRRVVTFH
Sbjct: 212 KLSRLVLRKDIKNHGNPTSHEPELVLTNFTTRLGHRAGRIIQSLFPQEPNFRGRRVVTFH 271
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IFFRHHRYIFETKESK SD+ GKK KD K EK SQQKVI RLQECGPRFTLKL S
Sbjct: 272 NQRDYIFFRHHRYIFETKESKQSDSKGKKGKDGKGEKISQQKVIARLQECGPRFTLKLRS 331
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 332 LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 361
>gi|242094590|ref|XP_002437785.1| hypothetical protein SORBIDRAFT_10g002530 [Sorghum bicolor]
gi|241916008|gb|EER89152.1| hypothetical protein SORBIDRAFT_10g002530 [Sorghum bicolor]
Length = 362
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/272 (81%), Positives = 245/272 (90%), Gaps = 1/272 (0%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIENTREPDETVCRPDD ELFAGNDADEF+++LKQ PKILITTCRFNS RGPAF
Sbjct: 92 QVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQHITPKILITTCRFNSGRGPAF 151
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
I EL+ VIPNSHY KRGTY+LKKI++YAK +DFTS+IVVHTNRREPDALLIIGLPDGPTA
Sbjct: 152 IDELMQVIPNSHYVKRGTYELKKIVDYAKNRDFTSLIVVHTNRREPDALLIIGLPDGPTA 211
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKLVLRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVT
Sbjct: 212 HFKLSKLVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVT 271
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFRHHRYIF+TKE K + + KKAK ++S+ S+++VI RLQECGPRF LKL
Sbjct: 272 FHNQRDYIFFRHHRYIFDTKEKKVASKD-KKAKTSESKSESEKQVICRLQECGPRFVLKL 330
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++LQHGTFDTK GE+EWVHKP+MDTSRRRFFL
Sbjct: 331 LTLQHGTFDTKSGEYEWVHKPDMDTSRRRFFL 362
>gi|358346575|ref|XP_003637342.1| Ribosome production factor [Medicago truncatula]
gi|355503277|gb|AES84480.1| Ribosome production factor [Medicago truncatula]
Length = 356
Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/273 (82%), Positives = 243/273 (89%), Gaps = 2/273 (0%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIENTRE DETVC+PDD+ELFAGNDADEFSSILK+ +PKILITTCRFNS RGPA I
Sbjct: 84 VPKTIENTREVDETVCKPDDEELFAGNDADEFSSILKRQQSPKILITTCRFNSTRGPALI 143
Query: 62 SELLSVIPNSHYYKRGTYDLKK--IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
SELL VIPN+HY+KRGTYDLKK I+EYA KKDFTS++VVHTNRREP+ALLIIGLP+GPT
Sbjct: 144 SELLQVIPNAHYFKRGTYDLKKVMIVEYANKKDFTSLVVVHTNRREPNALLIIGLPEGPT 203
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
AHFKL+ LVLRKDIKNHG PT H PELVLNNF TRLGHRVGR+IQSLFPQ PEF+GRRVV
Sbjct: 204 AHFKLTNLVLRKDIKNHGVPTSHQPELVLNNFTTRLGHRVGRMIQSLFPQDPEFKGRRVV 263
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRDFIFFRHHRYIFETKE K ++ GK +D KSEK K I RLQECGPRFTLK
Sbjct: 264 TFHNQRDFIFFRHHRYIFETKEIKKIESKGKNDEDGKSEKVPDHKTIARLQECGPRFTLK 323
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 324 LKSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 356
>gi|358346852|ref|XP_003637478.1| Ribosome production factor [Medicago truncatula]
gi|355503413|gb|AES84616.1| Ribosome production factor [Medicago truncatula]
Length = 326
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/273 (82%), Positives = 243/273 (89%), Gaps = 2/273 (0%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIENTRE DETVC+PDD+ELFAGNDADEFSSILK+ +PKILITTCRFNS RGPA I
Sbjct: 54 VPKTIENTREVDETVCKPDDEELFAGNDADEFSSILKRQQSPKILITTCRFNSTRGPALI 113
Query: 62 SELLSVIPNSHYYKRGTYDLKK--IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
SELL VIPN+HY+KRGTYDLKK I+EYA KKDFTS++VVHTNRREP+ALLIIGLP+GPT
Sbjct: 114 SELLQVIPNAHYFKRGTYDLKKVMIVEYANKKDFTSLVVVHTNRREPNALLIIGLPEGPT 173
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
AHFKL+ LVLRKDIKNHG PT H PELVLNNF TRLGHRVGR+IQSLFPQ PEF+GRRVV
Sbjct: 174 AHFKLTNLVLRKDIKNHGVPTSHQPELVLNNFTTRLGHRVGRMIQSLFPQDPEFKGRRVV 233
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRDFIFFRHHRYIFETKE K ++ GK +D KSEK K I RLQECGPRFTLK
Sbjct: 234 TFHNQRDFIFFRHHRYIFETKEIKKIESKGKNDEDGKSEKVPDHKTIARLQECGPRFTLK 293
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L SLQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 294 LKSLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 326
>gi|226497220|ref|NP_001141844.1| hypothetical protein [Zea mays]
gi|194706152|gb|ACF87160.1| unknown [Zea mays]
gi|413950306|gb|AFW82955.1| hypothetical protein ZEAMMB73_160675 [Zea mays]
Length = 360
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/272 (80%), Positives = 237/272 (87%), Gaps = 3/272 (1%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIENTREPDETVCRPDD ELFAGNDADEFS++LKQ PKILITTCRFNS RGPAF
Sbjct: 92 QVPRTIENTREPDETVCRPDDQELFAGNDADEFSAVLKQHITPKILITTCRFNSGRGPAF 151
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
I EL+ VIPNS Y KRGTY+LKKI+EYA +DFTS++VVHTNRREPDALLIIGLPDGPTA
Sbjct: 152 IDELMQVIPNSQYVKRGTYELKKIVEYANNRDFTSLVVVHTNRREPDALLIIGLPDGPTA 211
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKLVLRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVT
Sbjct: 212 HFKLSKLVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVT 271
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFRHHRYIFETKE K + + SEK Q+VI RLQECGPRFTLKL
Sbjct: 272 FHNQRDYIFFRHHRYIFETKEKKVASKEKTSGSKSGSEK---QQVICRLQECGPRFTLKL 328
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++LQHGTFDT+ GE+EWVHKP+MDTSRRRFFL
Sbjct: 329 LTLQHGTFDTRSGEYEWVHKPDMDTSRRRFFL 360
>gi|255548131|ref|XP_002515122.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
gi|223545602|gb|EEF47106.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
Length = 362
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/271 (82%), Positives = 240/271 (88%), Gaps = 3/271 (1%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
TPRTIENTRE DETVC+PDDDELFAGNDADEFS IL++ PKILITTCRFNS RGP FI
Sbjct: 95 TPRTIENTREFDETVCKPDDDELFAGNDADEFSLILRRERTPKILITTCRFNSTRGPLFI 154
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E+LSVIPN+ Y KRGTYDLKKIIEYA KKDFT+II VHT+RREPDALLIIGLP GPTAH
Sbjct: 155 KEMLSVIPNAEYRKRGTYDLKKIIEYAIKKDFTTIIDVHTSRREPDALLIIGLPYGPTAH 214
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FKLS LVLRKDIKNHGNPT H PELVLNNF TRLGHR+GRLIQS+FPQ P FRGRRVVTF
Sbjct: 215 FKLSNLVLRKDIKNHGNPTNHQPELVLNNFTTRLGHRIGRLIQSIFPQDPNFRGRRVVTF 274
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIFETKE K +D+ G+K K EK +Q+KV+ RLQECGPRFTLKL+
Sbjct: 275 HNQRDFIFFRHHRYIFETKECKDNDSKGQK---VKGEKIAQEKVVARLQECGPRFTLKLI 331
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQHGTFDTK GE+EWVHKPEMD SRRRFFL
Sbjct: 332 SLQHGTFDTKSGEYEWVHKPEMDASRRRFFL 362
>gi|55296455|dbj|BAD68651.1| putative RNA processing factor 1 [Oryza sativa Japonica Group]
gi|55296996|dbj|BAD68471.1| putative RNA processing factor 1 [Oryza sativa Japonica Group]
gi|218197524|gb|EEC79951.1| hypothetical protein OsI_21547 [Oryza sativa Indica Group]
Length = 360
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/272 (79%), Positives = 242/272 (88%), Gaps = 1/272 (0%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
+ PRTIENTREPDETVCRPDD ELFAGNDADEF+++LKQ PK+LITTCRFNS RGPAF
Sbjct: 90 LVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQQTTPKVLITTCRFNSGRGPAF 149
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
I EL+ VIPNS Y KRGTY+LKKI+EYA +DFTS++VVHTNRREPDALLII LP GPTA
Sbjct: 150 IEELMQVIPNSCYVKRGTYELKKIVEYANNRDFTSLVVVHTNRREPDALLIINLPAGPTA 209
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKL+LRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVT
Sbjct: 210 HFKLSKLILRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQEPNFRGRRVVT 269
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFRHHRYIFE KE+K + + KKAK ++S+ +++VI RLQECGPRFTLKL
Sbjct: 270 FHNQRDYIFFRHHRYIFEMKENKIA-SKDKKAKTSESKSQPEKQVICRLQECGPRFTLKL 328
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++LQHGTFDTK GE+EWVHKP+MDTSRRRFFL
Sbjct: 329 LTLQHGTFDTKNGEYEWVHKPDMDTSRRRFFL 360
>gi|222634921|gb|EEE65053.1| hypothetical protein OsJ_20052 [Oryza sativa Japonica Group]
Length = 327
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/272 (79%), Positives = 242/272 (88%), Gaps = 1/272 (0%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
+ PRTIENTREPDETVCRPDD ELFAGNDADEF+++LKQ PK+LITTCRFNS RGPAF
Sbjct: 57 LVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQQTTPKVLITTCRFNSGRGPAF 116
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
I EL+ VIPNS Y KRGTY+LKKI+EYA +DFTS++VVHTNRREPDALLII LP GPTA
Sbjct: 117 IEELMQVIPNSCYVKRGTYELKKIVEYANNRDFTSLVVVHTNRREPDALLIINLPAGPTA 176
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKL+LRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVT
Sbjct: 177 HFKLSKLILRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQEPNFRGRRVVT 236
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFRHHRYIFE KE+K + + KKAK ++S+ +++VI RLQECGPRFTLKL
Sbjct: 237 FHNQRDYIFFRHHRYIFEMKENKIA-SKDKKAKTSESKSQPEKQVICRLQECGPRFTLKL 295
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++LQHGTFDTK GE+EWVHKP+MDTSRRRFFL
Sbjct: 296 LTLQHGTFDTKNGEYEWVHKPDMDTSRRRFFL 327
>gi|297810003|ref|XP_002872885.1| hypothetical protein ARALYDRAFT_912074 [Arabidopsis lyrata subsp.
lyrata]
gi|297318722|gb|EFH49144.1| hypothetical protein ARALYDRAFT_912074 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/272 (81%), Positives = 235/272 (86%), Gaps = 9/272 (3%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
M P+TIENTRE DETVCRPDD+ELFA DADEF+ +L++ PKILITTCRFNS RGPAF
Sbjct: 85 MIPKTIENTREADETVCRPDDEELFADIDADEFNPVLRREITPKILITTCRFNSTRGPAF 144
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
ISELLSVIPNSHY KRGTYDLKKI+EYA KKDFTS+IVVHTNRREPDALLIIGLP GPTA
Sbjct: 145 ISELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIGLPTGPTA 204
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLS LVLRKDIKNHGNPT H PELVLNNF TRLG+RVGR QSLFP P FRGRRVVT
Sbjct: 205 HFKLSNLVLRKDIKNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNFRGRRVVT 264
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFRHHRYIFETKESK SD K KD Q+ + RLQECGPRFTLKL
Sbjct: 265 FHNQRDFIFFRHHRYIFETKESKQSD----KGKDG-----VQETIKPRLQECGPRFTLKL 315
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
V+LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL
Sbjct: 316 VTLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 347
>gi|326511531|dbj|BAJ91910.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/272 (77%), Positives = 234/272 (86%), Gaps = 4/272 (1%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIENTREPDETVCRPDD ELFAGNDADEF+++LKQ PK+LITTCRFNS RGPAF
Sbjct: 89 QVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQVVTPKVLITTCRFNSGRGPAF 148
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
I EL+ VIPN+ Y RGTYDLKKI+EYA ++FTS++VVHTNRREPDALLII LP+GPTA
Sbjct: 149 IKELMQVIPNAQYVNRGTYDLKKIVEYANNREFTSVMVVHTNRREPDALLIINLPEGPTA 208
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKLVLRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVT
Sbjct: 209 HFKLSKLVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVT 268
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFRHHRYIFE KE K K K +K E ++++V RLQECGPRFTLKL
Sbjct: 269 FHNQRDYIFFRHHRYIFEEKEKKIVS----KDKKSKGETKTEKQVNCRLQECGPRFTLKL 324
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+LQHGTFDTK GE+EWVHKP++DTSRRRFFL
Sbjct: 325 QTLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 356
>gi|326519999|dbj|BAK03924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/272 (77%), Positives = 234/272 (86%), Gaps = 4/272 (1%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIENTREPDETVCRPDD ELFAGNDADEF+++ KQ PK+LITTCRFNS RGPAF
Sbjct: 88 QVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVFKQVVTPKVLITTCRFNSGRGPAF 147
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
I EL+ VIPN+ Y RGTYDLKKI+EYA ++FTS++VVHTNRREPDALLII LP+GPTA
Sbjct: 148 IKELMQVIPNAQYVNRGTYDLKKIVEYANNREFTSVMVVHTNRREPDALLIINLPEGPTA 207
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKLVLRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVT
Sbjct: 208 HFKLSKLVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVT 267
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFRHHRYIFE KE K K K +K E ++++V RLQECGPRFTLKL
Sbjct: 268 FHNQRDYIFFRHHRYIFEEKEKKIVS----KDKKSKGETKTEKQVNCRLQECGPRFTLKL 323
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++LQHGTFDTK GE+EWVHKP++DTSRRRFFL
Sbjct: 324 LTLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 355
>gi|18411672|ref|NP_567213.1| ribosomal RNA processing brix domain-containing protein
[Arabidopsis thaliana]
gi|7268199|emb|CAB77726.1| hypothetical protein [Arabidopsis thaliana]
gi|15215626|gb|AAK91358.1| AT4g01560/F11O4_6 [Arabidopsis thaliana]
gi|21554359|gb|AAM63466.1| unknown [Arabidopsis thaliana]
gi|58652114|gb|AAW80882.1| At4g01560 [Arabidopsis thaliana]
gi|332656642|gb|AEE82042.1| ribosomal RNA processing brix domain-containing protein
[Arabidopsis thaliana]
Length = 343
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/272 (79%), Positives = 234/272 (86%), Gaps = 13/272 (4%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
M P+TIENTRE DETVCRPDD+ELFA DADEF+ +L++ APK+L+TTCRFNS RGPA
Sbjct: 85 MIPKTIENTRESDETVCRPDDEELFADIDADEFNPVLRREIAPKVLLTTCRFNSTRGPAL 144
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
ISELLSVIPNSHY KRGTYDLKKI+EYA KKDFTS+IVVHTNRREPDALLIIGLP+GPTA
Sbjct: 145 ISELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIGLPNGPTA 204
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLS LVLRKDIKNHGNPT H PELVLNNF TRLG+RVGR QSLFP P FRGRRVVT
Sbjct: 205 HFKLSNLVLRKDIKNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNFRGRRVVT 264
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFRHHRYIFETKES KS+K ++ + RLQECGPRFTLKL
Sbjct: 265 FHNQRDFIFFRHHRYIFETKES-------------KSDKGKEETIKPRLQECGPRFTLKL 311
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
V+LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL
Sbjct: 312 VTLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 343
>gi|449437644|ref|XP_004136601.1| PREDICTED: ribosome production factor 1-like [Cucumis sativus]
gi|449524700|ref|XP_004169359.1| PREDICTED: ribosome production factor 1-like [Cucumis sativus]
Length = 332
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/270 (81%), Positives = 241/270 (89%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIENTRE DETVC+PDD+ELFAGNDADEFSSI+K+ PKILITTCRFNS GPAFIS
Sbjct: 63 PRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPAFIS 122
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
ELLSVIPN+HYYKRGT DLKKI+EYA KDFTS++VVHT+RR+ D LLIIGLP+GPTAHF
Sbjct: 123 ELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHF 182
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K+S +VLRK+IKNHGNPTGH PELVL NF TRLG RVGRLIQSLFPQ P FRGRRVVTFH
Sbjct: 183 KISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFH 242
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRYIFE+KE+K + KK+K K EK QQKVI RLQECGPRFT+KL+S
Sbjct: 243 NQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQECGPRFTMKLIS 302
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Sbjct: 303 LQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332
>gi|357110851|ref|XP_003557229.1| PREDICTED: ribosome production factor 1-like [Brachypodium
distachyon]
Length = 361
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/272 (77%), Positives = 233/272 (85%), Gaps = 1/272 (0%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIENTREPDETVCRPDD ELFAGNDADEF+++LKQ PK+LITTCRFNS RGPAF
Sbjct: 91 QVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQQVTPKVLITTCRFNSGRGPAF 150
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
I EL+ VIP++ Y RGTYDLKKI+EYA +DFTS++VVHTNRREPDALLII LPDGPTA
Sbjct: 151 IKELMEVIPDAQYVNRGTYDLKKIVEYANNRDFTSVMVVHTNRREPDALLIINLPDGPTA 210
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKL+LRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVT
Sbjct: 211 HFKLSKLILRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVT 270
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFRHHRY+FE KE K + K ++T +Q V RLQECGPRFTLKL
Sbjct: 271 FHNQRDYIFFRHHRYVFEEKEIKVVSKDKKAKSSESKKQTEKQ-VTCRLQECGPRFTLKL 329
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++LQHGTFDTK GE+EWVHKP+MDTSRRRFFL
Sbjct: 330 ITLQHGTFDTKSGEYEWVHKPDMDTSRRRFFL 361
>gi|115466268|ref|NP_001056733.1| Os06g0137500 [Oryza sativa Japonica Group]
gi|113594773|dbj|BAF18647.1| Os06g0137500 [Oryza sativa Japonica Group]
gi|215706337|dbj|BAG93193.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 392
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/260 (78%), Positives = 230/260 (88%), Gaps = 1/260 (0%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
+ PRTIENTREPDETVCRPDD ELFAGNDADEF+++LKQ PK+LITTCRFNS RGPAF
Sbjct: 90 LVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQQTTPKVLITTCRFNSGRGPAF 149
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
I EL+ VIPNS Y KRGTY+LKKI+EYA +DFTS++VVHTNRREPDALLII LP GPTA
Sbjct: 150 IEELMQVIPNSCYVKRGTYELKKIVEYANNRDFTSLVVVHTNRREPDALLIINLPAGPTA 209
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKL+LRKDIKNHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVT
Sbjct: 210 HFKLSKLILRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQEPNFRGRRVVT 269
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFRHHRYIFE KE+K + + KKAK ++S+ +++VI RLQECGPRFTLKL
Sbjct: 270 FHNQRDYIFFRHHRYIFEMKENKIA-SKDKKAKTSESKSQPEKQVICRLQECGPRFTLKL 328
Query: 241 VSLQHGTFDTKGGEFEWVHK 260
++LQHGTFDTK GE+EWVHK
Sbjct: 329 LTLQHGTFDTKNGEYEWVHK 348
>gi|3695379|gb|AAC62782.1| F11O4.6 [Arabidopsis thaliana]
Length = 434
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/276 (76%), Positives = 228/276 (82%), Gaps = 23/276 (8%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
M P+TIENTRE DETVCRPDD+ELFA DADEF+ +L++ APK+L+TTCRFNS RGPA
Sbjct: 98 MIPKTIENTRESDETVCRPDDEELFADIDADEFNPVLRREIAPKVLLTTCRFNSTRGPAL 157
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP-------DALLIIG 113
ISELLSVIPNSHY KRGTYDLKKI+EYA KKDFTS+IVVHTNRREP DALLIIG
Sbjct: 158 ISELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPAFAISYVDALLIIG 217
Query: 114 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 173
LP+GPTAHFKLS LVLRKDIKNHGNPT H PELVLNNF TRLG+RVGR QSLFP P F
Sbjct: 218 LPNGPTAHFKLSNLVLRKDIKNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNF 277
Query: 174 RGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 233
RGRRVVTFHNQRDFIFFRHHRYIFETKES KS+K ++ + RLQECG
Sbjct: 278 RGRRVVTFHNQRDFIFFRHHRYIFETKES-------------KSDKGKEETIKPRLQECG 324
Query: 234 PRFTLKLVSLQHGTFDTKGGEFEWVHK---PEMDTS 266
PRFTLKLV+LQHGTFDTKGGEFEWVHK PEMDTS
Sbjct: 325 PRFTLKLVTLQHGTFDTKGGEFEWVHKVKSPEMDTS 360
>gi|224285331|gb|ACN40390.1| unknown [Picea sitchensis]
Length = 341
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/271 (73%), Positives = 223/271 (82%), Gaps = 2/271 (0%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PRTIENTRE DETVC+PDD+ELFA N ADEFS+ PKILIT+ RF+S RG I
Sbjct: 73 VPRTIENTREADETVCQPDDEELFADNAADEFSAHFSHVQNPKILITSSRFHSTRGNQLI 132
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
ELLSVIPN+HYYKRGTY+LKKI+EYAK +DFT IIV+H NRREP+ +L I LPDGPTAH
Sbjct: 133 EELLSVIPNAHYYKRGTYELKKIVEYAKSRDFTFIIVIHQNRREPNGMLFINLPDGPTAH 192
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F LS LVLRKDIKNHG PT H PEL+LNNF+TRLGHR+GR+I S+FP P FRGRRVVTF
Sbjct: 193 FNLSSLVLRKDIKNHGRPTSHQPELILNNFSTRLGHRIGRMIASVFPHDPNFRGRRVVTF 252
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIFETK+ G K +D K K ++ VI RLQECGPRFTLKL+
Sbjct: 253 HNQRDFIFFRHHRYIFETKDLNGGKPKEKATEDGK--KQQKETVIARLQECGPRFTLKLL 310
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQHGTFDTKGGE+EWVHKP+MDTSRRRFFL
Sbjct: 311 SLQHGTFDTKGGEYEWVHKPDMDTSRRRFFL 341
>gi|147787186|emb|CAN66830.1| hypothetical protein VITISV_030888 [Vitis vinifera]
Length = 383
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/309 (62%), Positives = 207/309 (66%), Gaps = 84/309 (27%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P TIENTRE DETVC+PDD+ELFAGNDADEFSSIL + PKILITTCRFNS RGPAFIS
Sbjct: 98 PHTIENTREFDETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFIS 157
Query: 63 ELLSVIPNSHYYKRGTYDLKK--IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
ELLSVIPN+HYYKRGTYDLKK I+EYAKKKDFTS+IVVHTNRREPDALLIIGLPDGPTA
Sbjct: 158 ELLSVIPNAHYYKRGTYDLKKVLIVEYAKKKDFTSLIVVHTNRREPDALLIIGLPDGPTA 217
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKLSKLVLRKD+KNHGNPT HIPELVLNNF TRLGHR+G
Sbjct: 218 HFKLSKLVLRKDVKNHGNPTSHIPELVLNNFTTRLGHRIG-------------------- 257
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ---------- 230
RYIFE+KESK D+ G K KDAK EK+S KV+ RLQ
Sbjct: 258 -------------RYIFESKESKQGDSKGNKDKDAKGEKSSXGKVVARLQVQVLMDCPQL 304
Query: 231 ---------------------------------------ECGPRFTLKLVSLQHGTFDTK 251
ECGPRFTLKL+SLQHGTFDTK
Sbjct: 305 QLLSTLIFLPHYFSNPGSALARKXNYYRPAVSYRPIIRPECGPRFTLKLISLQHGTFDTK 364
Query: 252 GGEFEWVHK 260
GGE+EWVHK
Sbjct: 365 GGEYEWVHK 373
>gi|168038173|ref|XP_001771576.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677132|gb|EDQ63606.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/278 (62%), Positives = 214/278 (76%), Gaps = 8/278 (2%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIENTRE DETV +PDD+EL + DEFS + PK+LITT + S+ FI
Sbjct: 54 VPKTIENTREADETVAQPDDEELQVDDGVDEFSGHFARAQMPKLLITTSQECSSPTRKFI 113
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
ELL+VIPN+ +YKRG+YDLK+I+++AK +DFT++ VV+ NR++P+ LL+I LP+GPTAH
Sbjct: 114 KELLTVIPNATFYKRGSYDLKQIVKFAKNRDFTTMFVVNENRKQPNGLLMIALPEGPTAH 173
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FKLS + L K IK HG PT H+PEL+LNNF TRLGHRVGRL S+FPQ P+FRGRR VTF
Sbjct: 174 FKLSSIKLSKKIKGHGKPTSHMPELLLNNFTTRLGHRVGRLFASVFPQDPQFRGRRAVTF 233
Query: 182 HNQRDFIFFRHHRYIFETKESK-------GSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
HNQRDFIFFRHHRYIFE KE K G +++ KK++ A + + V+ RLQECGP
Sbjct: 234 HNQRDFIFFRHHRYIFEEKEIKELAPVTIGVNSD-KKSRKAAPKTVKKNAVVARLQECGP 292
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
RFTLKL SLQ GTFD+K GE+EWVHKP+MDTSRRRFFL
Sbjct: 293 RFTLKLQSLQSGTFDSKYGEYEWVHKPDMDTSRRRFFL 330
>gi|302818745|ref|XP_002991045.1| hypothetical protein SELMODRAFT_185811 [Selaginella moellendorffii]
gi|300141139|gb|EFJ07853.1| hypothetical protein SELMODRAFT_185811 [Selaginella moellendorffii]
Length = 337
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 177/283 (62%), Positives = 210/283 (74%), Gaps = 23/283 (8%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
TPRTIENTREPDET+ RPDDDEL A DEF+ + +PK+LITTCR S R I
Sbjct: 66 TPRTIENTREPDETIVRPDDDELLADIATDEFAEHFNRDKSPKLLITTCRKCSKRTFKLI 125
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL SVIPN+ YYKR LK++++ A ++DFT+I+V+H NRREPD ++I+ LP+GPTAH
Sbjct: 126 LELQSVIPNTEYYKRNKRSLKQLVKDATEQDFTAIVVIHENRREPDGMVIVNLPEGPTAH 185
Query: 122 FKLSKLVLRKDIK-----------NHGNPTGHIPELVLNNFATRLGHRVGR-LIQSLFPQ 169
F+LS LVLRK+IK NHG PT H+PEL+LNNF T LGHR+GR + SLF Q
Sbjct: 186 FRLSNLVLRKEIKARESDSPSFSINHGRPTSHLPELILNNFTTSLGHRIGRWMFASLFYQ 245
Query: 170 SPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRL 229
P FRGRRVVTFHNQRD+IFFRHHRY+FE KE+K K E+ + VI RL
Sbjct: 246 DPNFRGRRVVTFHNQRDYIFFRHHRYVFEPKETK-----------QKGEQKKKTAVIARL 294
Query: 230 QECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
QECGPRFTLKL+SLQHGTFDTK GE+EWVHKP+MDTSRRRFFL
Sbjct: 295 QECGPRFTLKLLSLQHGTFDTKHGEYEWVHKPDMDTSRRRFFL 337
>gi|302839132|ref|XP_002951123.1| hypothetical protein VOLCADRAFT_42845 [Volvox carteri f.
nagariensis]
gi|300263452|gb|EFJ47652.1| hypothetical protein VOLCADRAFT_42845 [Volvox carteri f.
nagariensis]
Length = 319
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/274 (55%), Positives = 197/274 (71%), Gaps = 13/274 (4%)
Query: 5 TIENTREPDETVCRPDDDELFAGNDADEFSSI--LKQGCAPKILITTCRFNSNRGPAFIS 62
T+ENTRE D+T+ P+D E+ A + DEF+ + APK+LITT S F+S
Sbjct: 53 TLENTREADDTMVDPEDAEVMADENDDEFAGVSHFANARAPKVLITTSYKPSKIMYTFLS 112
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP---DALLIIGLPDGPT 119
E+L ++P + YYKR + LKKI+++A +D+T ++VV+ +R++ + LL++ LPDGPT
Sbjct: 113 EMLELLPCAEYYKRNGFPLKKIVKFAANRDYTDLLVVNEDRKQAGIINGLLLVHLPDGPT 172
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
AHF+LS L L KDIK HG T H PEL+LN+F TRLGHR+GR++ SLFPQ P+FRGRRVV
Sbjct: 173 AHFRLSNLKLGKDIKGHGRTTSHKPELILNHFDTRLGHRLGRMLASLFPQDPQFRGRRVV 232
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGS-DANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
TFHNQRDFIF RHHRYIFE KE++ S DA G AK K+ V RLQE GPRF+L
Sbjct: 233 TFHNQRDFIFVRHHRYIFEEKETRDSGDAKGDSAKKKKA-------VTARLQELGPRFSL 285
Query: 239 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
KL+SLQ GTFD++ GEFEW+ K E TSRRRFFL
Sbjct: 286 KLLSLQKGTFDSRNGEFEWLPKKENKTSRRRFFL 319
>gi|307104623|gb|EFN52876.1| hypothetical protein CHLNCDRAFT_26344 [Chlorella variabilis]
Length = 341
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/272 (58%), Positives = 190/272 (69%), Gaps = 12/272 (4%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIENTRE DET+ +PDD E+ A D DEF+ K+ P +LITT + FI
Sbjct: 81 VPKTIENTREKDETMVQPDDAEVAADEDQDEFAEHFKRVRPPNVLITTSYKVTGAMYRFI 140
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
SELL V+P + YYKR Y LKKI+EYAK +DFT ++V + +R++ + LL++ LPDGPTA
Sbjct: 141 SELLEVLPCATYYKRQGYPLKKIVEYAKSRDFTDLMVFNEDRKQINGLLLVHLPDGPTAQ 200
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS LVL DIK H T H PELVLNNF TRLGHRVGR+ SLF Q P FRGRRVVTF
Sbjct: 201 FRLSNLVLSNDIKGHARATSHRPELVLNNFDTRLGHRVGRMFASLFHQDPTFRGRRVVTF 260
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIFE ++ K K +K V RLQE GPRFTLKL
Sbjct: 261 HNQRDFIFFRHHRYIFEERQKK-----------EKGKKEKVNTVKARLQEIGPRFTLKLQ 309
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTF++KGGEFEW+HK E DTSRR+F L
Sbjct: 310 SLQKGTFNSKGGEFEWMHKAGEQDTSRRKFQL 341
>gi|320165875|gb|EFW42774.1| MEE49 [Capsaspora owczarzaki ATCC 30864]
Length = 350
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/272 (52%), Positives = 176/272 (64%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE+TRE DET+ PDD E+ DEF++ PK+LITT F+
Sbjct: 103 VPKTIESTREFDETIVNPDDQEVVEDEAMDEFANYFNGETLPKLLITTSIKPVGETFKFV 162
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L++ IPN+ Y R +DLK+IIE+AK ++FT +++++ N +E D L+I LPDGPTAH
Sbjct: 163 QDLVTAIPNATYVPRQKFDLKQIIEFAKNREFTDVMLINENNKEADGLIITHLPDGPTAH 222
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FKLS + + K I+NH + H PELVLNNF TRLGH VGR+ +LFP PEF GRRV+TF
Sbjct: 223 FKLSSIQIAKTIRNHARSSDHRPELVLNNFNTRLGHTVGRMFATLFPHDPEFVGRRVITF 282
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIF + G LQE GPRFTLKL
Sbjct: 283 HNQRDFIFFRHHRYIFRNAQKVG------------------------LQEIGPRFTLKLR 318
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD K GE+EW HK EMDTSRRRFFL
Sbjct: 319 SLQKGTFDAKYGEYEWTHKRGEMDTSRRRFFL 350
>gi|226875221|gb|ACO88964.1| RNA processing factor 1 (predicted) [Dasypus novemcinctus]
Length = 349
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/273 (51%), Positives = 180/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
TP+TI+N R PDET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 TPKTIDNQRVPDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IVV+ +R+ P+ L++ LP GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVVNEDRKTPNGLILSHLPHGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +P HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKKKGKDPKEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|198436623|ref|XP_002127271.1| PREDICTED: similar to Rpf1-pending-prov protein [Ciona
intestinalis]
Length = 351
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/271 (51%), Positives = 177/271 (65%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TIEN RE ++T+ +PDD E+ ++DE +S ++ PKILITT +R F+
Sbjct: 105 PKTIENRREKEDTMVQPDDVEVLLDEESDEMASYFERKTTPKILITTSDRPRSRTTKFLK 164
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL PNS + R DLKK+I K FT II+V+ +R+ P+ LL+ LP+GPT HF
Sbjct: 165 ELSEGFPNSTVFYRRALDLKKVIPQCIMKGFTDIIIVNEDRKTPNGLLLCHLPEGPTVHF 224
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K+S + LRK+IKN P+ H PE++LNNF TRLGH +GR+ +LFP +PEF GR+VVTFH
Sbjct: 225 KMSNVKLRKEIKNSTTPSEHQPEIILNNFGTRLGHTIGRMFTTLFPHNPEFIGRQVVTFH 284
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRYIF ++ G LQE GPRFTLKL S
Sbjct: 285 NQRDFIFFRHHRYIFRNEKRVG------------------------LQEIGPRFTLKLRS 320
Query: 243 LQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFD+K GE+EW+HK EMDTSRRRF L
Sbjct: 321 LQKGTFDSKFGEYEWIHKRHEMDTSRRRFHL 351
>gi|149709677|ref|XP_001497217.1| PREDICTED: ribosome production factor 1-like [Equus caballus]
Length = 349
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 180/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|395821852|ref|XP_003784245.1| PREDICTED: ribosome production factor 1 [Otolemur garnettii]
Length = 349
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/272 (51%), Positives = 178/272 (65%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 102 PKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCE 161
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHF
Sbjct: 162 QLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAHF 221
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
K+S + LRK+IK G +PT HIPE++LNNF TRLGH VGR+ SLFP P+F GR+V TF
Sbjct: 222 KMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSVGRMFASLFPHDPQFVGRQVATF 281
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 282 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 317
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|410967612|ref|XP_003990312.1| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1 [Felis
catus]
Length = 349
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/272 (51%), Positives = 179/272 (65%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TI+N R DET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 102 PKTIDNQRVHDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCE 161
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAHF
Sbjct: 162 QLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPSGPTAHF 221
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
K+S + LRK+IK G +PT H+PE++LNNF TRLGH VGR+ SLFP +P+F GR+V TF
Sbjct: 222 KMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSVGRMFASLFPHNPQFIGRQVATF 281
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 282 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 317
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|417409906|gb|JAA51442.1| Putative ribosome bioproteinsis protein rpf1, partial [Desmodus
rotundus]
Length = 347
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/272 (51%), Positives = 178/272 (65%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TI+N R DET P D+E+ DEF+S + +PKILITT R
Sbjct: 100 PKTIDNQRVYDETTVDPADEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCE 159
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAHF
Sbjct: 160 QLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAHF 219
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
K+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TF
Sbjct: 220 KMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFTGRQVATF 279
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 280 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 315
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 316 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 347
>gi|441637454|ref|XP_003260310.2| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1
[Nomascus leucogenys]
Length = 348
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/273 (51%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 100 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLC 159
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IVV+ +R+ P+ L++ LP+GPTAH
Sbjct: 160 EQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVVNEDRKTPNGLILSHLPNGPTAH 219
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 220 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 279
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 280 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 315
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 316 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 348
>gi|134085755|ref|NP_001076886.1| ribosome production factor 1 [Bos taurus]
gi|133777568|gb|AAI14878.1| BXDC5 protein [Bos taurus]
gi|296489206|tpg|DAA31319.1| TPA: RNA processing factor 1 [Bos taurus]
gi|440912943|gb|ELR62461.1| Ribosome production factor 1 [Bos grunniens mutus]
Length = 349
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 180/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|291398615|ref|XP_002715937.1| PREDICTED: RNA processing factor 1-like [Oryctolagus cuniculus]
Length = 349
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 179/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVKLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHRPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKAG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|431897028|gb|ELK06292.1| Ribosome production factor 1 [Pteropus alecto]
Length = 349
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/272 (51%), Positives = 178/272 (65%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 102 PKTIDNQRVYDETTVDPNDEEVAFDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCE 161
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAHF
Sbjct: 162 QLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPSGPTAHF 221
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
K+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TF
Sbjct: 222 KMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATF 281
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 282 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 317
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|90085573|dbj|BAE91527.1| unnamed protein product [Macaca fascicularis]
Length = 349
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDESTDEFASYFNKQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII ++FT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCIAREFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|426330175|ref|XP_004026097.1| PREDICTED: ribosome production factor 1 [Gorilla gorilla gorilla]
Length = 349
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|10433984|dbj|BAB14086.1| unnamed protein product [Homo sapiens]
gi|16359171|gb|AAH16051.1| Brix domain containing 5 [Homo sapiens]
gi|119593643|gb|EAW73237.1| brix domain containing 5 [Homo sapiens]
gi|312150426|gb|ADQ31725.1| brix domain containing 5 [synthetic construct]
Length = 349
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|296208364|ref|XP_002751060.1| PREDICTED: ribosome production factor 1 [Callithrix jacchus]
Length = 349
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCITRDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ S+FP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASVFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|426215862|ref|XP_004002188.1| PREDICTED: ribosome production factor 1 [Ovis aries]
Length = 349
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 179/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPSGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|197101149|ref|NP_001126626.1| ribosome production factor 1 [Pongo abelii]
gi|71153720|sp|Q5R631.1|RPF1_PONAB RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|55732160|emb|CAH92785.1| hypothetical protein [Pongo abelii]
Length = 349
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|57088279|ref|XP_537096.1| PREDICTED: ribosome production factor 1 [Canis lupus familiaris]
Length = 349
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 179/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPSGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEVILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|145275210|ref|NP_079341.2| ribosome production factor 1 [Homo sapiens]
gi|114557449|ref|XP_524755.2| PREDICTED: ribosome production factor 1 isoform 2 [Pan troglodytes]
gi|397467230|ref|XP_003805327.1| PREDICTED: ribosome production factor 1 [Pan paniscus]
gi|71153718|sp|Q9H9Y2.2|RPF1_HUMAN RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|17225079|gb|AAL37236.1| RNA processing factor 1 [Homo sapiens]
gi|410222914|gb|JAA08676.1| ribosome production factor 1 homolog [Pan troglodytes]
gi|410249698|gb|JAA12816.1| ribosome production factor 1 homolog [Pan troglodytes]
gi|410288776|gb|JAA22988.1| ribosome production factor 1 homolog [Pan troglodytes]
Length = 349
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|387849258|ref|NP_001248500.1| ribosome production factor 1 [Macaca mulatta]
gi|355569284|gb|EHH25395.1| hypothetical protein EGK_21569 [Macaca mulatta]
gi|355745410|gb|EHH50035.1| hypothetical protein EGM_00796 [Macaca fascicularis]
gi|380816714|gb|AFE80231.1| ribosome production factor 1 [Macaca mulatta]
gi|383421755|gb|AFH34091.1| ribosome production factor 1 [Macaca mulatta]
gi|384949528|gb|AFI38369.1| ribosome production factor 1 [Macaca mulatta]
Length = 349
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDESTDEFASYFNKQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII ++FT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCIAREFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|50949520|emb|CAH10671.1| hypothetical protein [Homo sapiens]
gi|50950010|emb|CAH10670.1| hypothetical protein [Homo sapiens]
Length = 256
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 8 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLC 67
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 68 EQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 127
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 128 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 187
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 188 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 223
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 224 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 256
>gi|187469108|gb|AAI66888.1| Bxdc5 protein [Rattus norvegicus]
gi|187469251|gb|AAI66920.1| Bxdc5 protein [Rattus norvegicus]
Length = 348
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 179/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 100 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 159
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 160 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 219
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 220 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 279
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 280 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 315
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 316 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 348
>gi|213512514|ref|NP_001094264.1| ribosome production factor 1 [Rattus norvegicus]
Length = 349
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 179/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|351715120|gb|EHB18039.1| Ribosome production factor 1 [Heterocephalus glaber]
Length = 349
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 177/273 (64%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+ + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFAPYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LPDGPTAH
Sbjct: 161 QQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPDGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|335308340|ref|XP_003361191.1| PREDICTED: ribosome production factor 1-like [Sus scrofa]
Length = 349
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET+ P+D+E+ DEF+S + PKILITT R
Sbjct: 101 VPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTCPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHTPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|169790907|ref|NP_081647.2| ribosome production factor 1 isoform 2 [Mus musculus]
gi|71153719|sp|Q7TND5.2|RPF1_MOUSE RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|148680021|gb|EDL11968.1| brix domain containing 5, isoform CRA_a [Mus musculus]
Length = 349
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 179/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|354485437|ref|XP_003504890.1| PREDICTED: ribosome production factor 1-like [Cricetulus griseus]
Length = 446
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P D+E+ DEF+S + +PKILITT R
Sbjct: 198 VPKTIDNQRVYDETTVDPTDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 257
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 258 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 317
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 318 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 377
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 378 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 413
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 414 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 446
>gi|403257648|ref|XP_003921414.1| PREDICTED: ribosome production factor 1 [Saimiri boliviensis
boliviensis]
Length = 350
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 177/273 (64%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 102 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLC 161
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 162 EQLSTVIPNSHVYYRRGLALKKIIPQCITRDFTDLIVINEDRKTPNGLILSHLPNGPTAH 221
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT HIPE++LNNF T LGH +GR+ SLFP +P+F GR+V T
Sbjct: 222 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTWLGHSIGRMFASLFPHNPQFIGRQVAT 281
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 282 FHNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKL 317
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 350
>gi|156392407|ref|XP_001636040.1| predicted protein [Nematostella vectensis]
gi|156223139|gb|EDO43977.1| predicted protein [Nematostella vectensis]
Length = 283
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/272 (49%), Positives = 177/272 (65%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PRTIENTR DET+ P D+E+ DE S K+ PK+LIT+ + F+
Sbjct: 36 VPRTIENTRVQDETMVDPLDEEVLQDESTDELSYYFKREVTPKVLITSSDRPKHPTVQFM 95
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL VIPNS +R DLKKII A+ K +T++I+++ + ++P+++++ +PDGPTAH
Sbjct: 96 EELCRVIPNSEVRQRKGRDLKKIIPQAQAKGYTAMIIINEDHKKPNSIVVTHIPDGPTAH 155
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FKLS + L K+I+ HG T H PEL+LNNF TRLGH V R++ +LFP P+F+GR+ VTF
Sbjct: 156 FKLSSVRLPKEIRGHGKMTSHKPELILNNFNTRLGHSVARVLAALFPYDPQFKGRQCVTF 215
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDF+FFR HRYIF+ + G LQE GPRFTLKL
Sbjct: 216 HNQRDFVFFRRHRYIFKNAKRVG------------------------LQELGPRFTLKLR 251
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
S+Q GTFD+K GE+EW+HK EMDTSRR+FFL
Sbjct: 252 SIQRGTFDSKFGEYEWIHKRKEMDTSRRKFFL 283
>gi|133777041|gb|AAH56165.2| Brix domain containing 5 [Mus musculus]
gi|133777107|gb|AAH89369.2| Brix domain containing 5 [Mus musculus]
Length = 284
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 179/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 36 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 95
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 96 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 155
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 156 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 215
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 216 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 251
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 252 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 284
>gi|348586184|ref|XP_003478849.1| PREDICTED: ribosome production factor 1-like [Cavia porcellus]
Length = 349
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/272 (50%), Positives = 178/272 (65%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TI+N R DET P+D+E+ DEF+ + +PKILITT R
Sbjct: 102 PKTIDNQRVYDETTVDPNDEEVAYDEATDEFAPYFNRETSPKILITTSDRPHGRTVKLCQ 161
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LKKII +DFT ++V++ +R+ P+ L++ LP+GPTAHF
Sbjct: 162 QLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLMVINEDRKTPNGLILSHLPNGPTAHF 221
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
K+S + LRK+IK G +PT HIPE++LNNF TRLGH +GR+ SLFP +P+F GR+V TF
Sbjct: 222 KMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATF 281
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 282 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 317
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 318 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|402855072|ref|XP_003892165.1| PREDICTED: ribosome production factor 1 [Papio anubis]
Length = 341
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/272 (50%), Positives = 178/272 (65%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 94 PKTIDNQRVYDETTVDPNDEEVAYDESTDEFASYFNKQTSPKILITTSDRPHGRTVRLCE 153
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LKKII ++FT +IV++ +R+ P+ L++ LP+GPTAHF
Sbjct: 154 QLSTVIPNSHVYYRRGLALKKIIPQCIAREFTDLIVINEDRKTPNGLILSHLPNGPTAHF 213
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
K+S + LRK+IK G +PT HIPE++LNNF T+LGH +GR+ SLFP +P+F GR+V TF
Sbjct: 214 KMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTQLGHSIGRMFASLFPHNPQFIGRQVATF 273
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF +++ G +QE GPRFTLKL
Sbjct: 274 HNQRDYIFFRFHRYIFRSEKKVG------------------------IQELGPRFTLKLR 309
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 310 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 341
>gi|74222733|dbj|BAE42233.1| unnamed protein product [Mus musculus]
Length = 349
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 178/273 (65%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKGEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|443711406|gb|ELU05194.1| hypothetical protein CAPTEDRAFT_20161 [Capitella teleta]
Length = 323
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 134/272 (49%), Positives = 179/272 (65%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R D T+ +D+E+ ADE ++ + PKI+ITT + F+
Sbjct: 76 VPKTIENMRVKDVTMVPMEDEEVALDEGADEMATYFNRETTPKIMITTSVRIRKKTGEFV 135
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL+ VIPNS R ++LKKII A +K FT I+VV+ + +EP+ L++ LPDGPTAH
Sbjct: 136 RELVKVIPNSTLVNRRGFELKKIIPSAIEKGFTDIMVVNDDNKEPNGLVLCHLPDGPTAH 195
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FK+S + L +++K G + H+PE++LNNF+TRLGH +GR++ S+FP P+F+GRRVVTF
Sbjct: 196 FKISNVRLSRNLKRVGKKSDHMPEVILNNFSTRLGHTIGRILASVFPHDPQFQGRRVVTF 255
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFRHHRY F+ KE G LQE GPRFTLKL
Sbjct: 256 HNQRDYIFFRHHRYQFKGKEKCG------------------------LQELGPRFTLKLR 291
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
+LQ GTFD+K GEFEW+HK EMD+SRR+FFL
Sbjct: 292 TLQKGTFDSKFGEFEWIHKRHEMDSSRRKFFL 323
>gi|344278966|ref|XP_003411262.1| PREDICTED: ribosome production factor 1-like [Loxodonta africana]
Length = 348
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/272 (50%), Positives = 177/272 (65%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TI+N R DET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 PKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCE 160
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP GPTAHF
Sbjct: 161 QLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKIPNGLILSHLPHGPTAHF 220
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
K+S + LRK+IK G +PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V TF
Sbjct: 221 KMSSVRLRKEIKRRGKDPTEHKPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATF 280
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 316
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 SLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 348
>gi|328772823|gb|EGF82861.1| hypothetical protein BATDEDRAFT_9487 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 134/272 (49%), Positives = 182/272 (66%), Gaps = 30/272 (11%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T+E RE DET+ D+E++A DEFSS K G PKIL+TT R S F
Sbjct: 54 VPQTLETLREEDETLVE-QDEEVYA----DEFSSYFKDGLPPKILVTTNRRPSASVYEFA 108
Query: 62 SELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ +S+ P++ + KRG+ +++KKI+E A ++ +T ++V++ +R++P+A+ +I LPDGPTA
Sbjct: 109 EQFVSIFPDAEFVKRGSQFEIKKIVEIAIERSYTDLVVINEDRKKPNAITLIHLPDGPTA 168
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFKL+ + L K I+ HG + PEL+LNNF TRLGH +GR+ S+FP PEF GR+V T
Sbjct: 169 HFKLTSVKLPKFIRGHGKADDYKPELILNNFNTRLGHTIGRMFASMFPHVPEFVGRQVAT 228
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRDFIFFR HRYIF NG++ +QE GPRFTLKL
Sbjct: 229 LHNQRDFIFFRRHRYIFR---------NGERCD---------------IQELGPRFTLKL 264
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SLQ GTFDTK GE+EW+HKPE+DTSRR+F L
Sbjct: 265 MSLQKGTFDTKFGEYEWLHKPELDTSRRKFHL 296
>gi|291236446|ref|XP_002738150.1| PREDICTED: CG6712-like [Saccoglossus kowalevskii]
Length = 318
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 170/272 (62%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIENTR DET+ P D+E+ DE SS + PKILITT +R
Sbjct: 71 VPKTIENTRVYDETMVDPQDEEVRYDEATDEMSSYFDRKSLPKILITTADRPKSRTTRLC 130
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL IPNS Y R LKKII A KDFT I+V++ +R++P+ L I LPDGPT H
Sbjct: 131 KELSDCIPNSEVYYRRGLALKKIIPQAIAKDFTDIVVINEDRKKPNGLYICHLPDGPTVH 190
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FK+S + L KDI++ + T H PE++LNNF TRLGH VGRL+ SLFP PEF+GR+ VTF
Sbjct: 191 FKMSSVRLSKDIRHCSSGTEHQPEVILNNFNTRLGHSVGRLLASLFPHDPEFQGRQAVTF 250
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF + G LQE GPRFTLKL
Sbjct: 251 HNQRDYIFFRRHRYIFRNTKRVG------------------------LQELGPRFTLKLR 286
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHK EMDTSRR+F L
Sbjct: 287 SLQKGTFDSKFGEYEWVHKRHEMDTSRRKFHL 318
>gi|348672964|gb|EGZ12783.1| hypothetical protein PHYSODRAFT_354905 [Phytophthora sojae]
Length = 324
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 139/274 (50%), Positives = 178/274 (64%), Gaps = 26/274 (9%)
Query: 1 MTPRTIENTREPDETVCRPD-DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA 59
M PRTI+NTRE + T+ + D+E+ A DEF+SI PK++ITT F S
Sbjct: 75 MEPRTIDNTREKEVTMVSSEGDEEIEADERDDEFASIFANEETPKLMITTRPFPSGELYH 134
Query: 60 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
FI +L+ ++PNS YYKRGT+D+K+I+++A K FT ++V+ + + +L+ LP+GPT
Sbjct: 135 FIKDLMDLLPNSFYYKRGTFDIKEIVQFATNKKFTHLVVLSEKSKICNGMLVSRLPEGPT 194
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
A FK+S + L IK G T H PEL+LNNF+TRLGHRVGR + SLF PEF G +VV
Sbjct: 195 AFFKVSNVKLTSSIKERGRRTNHQPELILNNFSTRLGHRVGRFLGSLFEHQPEFEGHQVV 254
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRDFIF RHHRY FE N KKA RLQE GPRFT+K
Sbjct: 255 TFHNQRDFIFVRHHRYTFE---------NEKKA---------------RLQEIGPRFTMK 290
Query: 240 LVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
L LQ GTFDTK GE+EW+HK ++DTSRR+F L
Sbjct: 291 LRWLQQGTFDTKFGEYEWIHKQHQLDTSRRKFHL 324
>gi|126306176|ref|XP_001367212.1| PREDICTED: ribosome production factor 1-like [Monodelphis
domestica]
Length = 349
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 177/273 (64%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET+ P+D+E+ DEF+S + +PKILITT R F
Sbjct: 101 VPKTIENQRVYDETIVDPNDEEVAYDEATDEFASHFNRQTSPKILITTSDRPRGRTVRFC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++ LP GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKRIIPQCISRDFTDLIVINEDRKIPNGLVLSHLPHGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + LRK+IK G PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V T
Sbjct: 221 FRMSSVRLRKEIKRKGKEPTQHSPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRY+F++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYLFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>gi|224057624|ref|XP_002187249.1| PREDICTED: ribosome production factor 1 [Taeniopygia guttata]
Length = 325
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/273 (49%), Positives = 175/273 (64%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEF+ + PKILITT R F
Sbjct: 77 VPKTIENQRVYDETTVDPNDEEVAFDEATDEFAPYFNRQTVPKILITTSDRPRGRTVRFC 136
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++ LPDGPTAH
Sbjct: 137 EQLATVIPNSHVYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHLPDGPTAH 196
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + LRK+IK G PT H+PE++LNNF TRLGH +GR+ +LFP P+F GR+V T
Sbjct: 197 FRMSSVRLRKEIKRKGKEPTEHVPEVILNNFTTRLGHSIGRMFAALFPHDPQFIGRQVAT 256
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 257 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 292
Query: 241 VSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EW+HK EMDTSRRRF L
Sbjct: 293 RSLQKGTFDSKYGEYEWIHKRREMDTSRRRFHL 325
>gi|326925169|ref|XP_003208792.1| PREDICTED: ribosome production factor 1-like [Meleagris gallopavo]
Length = 278
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 137/272 (50%), Positives = 175/272 (64%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TIEN R DET P+D+E+ DEF+ + PKILITT R F
Sbjct: 31 PKTIENQRIYDETTVDPNDEEVAFDIATDEFAPYFNRQTVPKILITTSDRPRGRTVRFCE 90
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++ LPDGPTAHF
Sbjct: 91 QLSTVIPNSHVYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHLPDGPTAHF 150
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
++S + LRK+IK G PT H+PE++LNNF TRLGH +GR+ SLFP P+F GR+V TF
Sbjct: 151 RMSSVRLRKEIKRKGKQPTEHVPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATF 210
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 211 HNQRDFIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 246
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EW+HK EMDTSRR+F L
Sbjct: 247 SLQKGTFDSKFGEYEWIHKRREMDTSRRKFHL 278
>gi|395530639|ref|XP_003767396.1| PREDICTED: ribosome production factor 1 [Sarcophilus harrisii]
Length = 367
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 176/273 (64%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET+ P+D+E+ DEF+S + PKILITT R F
Sbjct: 119 VPKTIENQRVYDETIVDPNDEEVAYDEATDEFASHFNRQTCPKILITTSDRPRGRTVRFC 178
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++ LP GPTAH
Sbjct: 179 EQLSTVIPNSHVYYRRGLALKRIIPQCISRDFTDLIVINEDRKIPNGLVLSHLPHGPTAH 238
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + LRK+IK G PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V T
Sbjct: 239 FRMSSVRLRKEIKRKGKEPTQHSPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVAT 298
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRY+F++++ G +QE GPRFTLKL
Sbjct: 299 FHNQRDYIFFRFHRYLFKSEKKVG------------------------IQELGPRFTLKL 334
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHKP EMDTSRR+F L
Sbjct: 335 RSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 367
>gi|363736721|ref|XP_422376.3| PREDICTED: ribosome production factor 1 [Gallus gallus]
Length = 340
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 175/272 (64%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TIEN R DET P+D+E+ DEF+ + PKILITT R F
Sbjct: 93 PKTIENQRIYDETTVDPNDEEVAFDIATDEFAPYFNRQTVPKILITTSDRPRGRTVRFCE 152
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++ LPDGPTAHF
Sbjct: 153 QLSTVIPNSHVYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHLPDGPTAHF 212
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
++S + LRK+IK G PT H+PE++LNNF TRLGH +GR+ SLFP P+F GR+V TF
Sbjct: 213 RMSSVRLRKEIKRKGKEPTEHVPEVILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATF 272
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 273 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 308
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EW+HK EMDTSRR+F L
Sbjct: 309 SLQKGTFDSKFGEYEWIHKRREMDTSRRKFHL 340
>gi|405977744|gb|EKC42178.1| Ribosome production factor 1 [Crassostrea gigas]
Length = 325
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 171/272 (62%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE+ R DET+ +D E+ DE ++ + +P+ILITTC R F
Sbjct: 78 VPKTIESMRVKDETMVNTEDTEVMLDEAQDELATYFNRETSPQILITTCDRPCLRTNKFC 137
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL IPNS R DLKKII AK++ +T II+V+ +R+EP+ L+I LP+GPT H
Sbjct: 138 KELKLTIPNSEIKYRRGLDLKKIIPQAKERGYTDIIIVNEDRKEPNGLVITHLPEGPTLH 197
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FKLS + L +IK G + H PEL+LNNF TRLGH VGR+ SLFP P+F+GRRVVTF
Sbjct: 198 FKLSSVRLTTEIKRVGEMSKHKPELILNNFGTRLGHSVGRVFASLFPHDPQFQGRRVVTF 257
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRY+F + G L++ GPRFTLKL
Sbjct: 258 HNQRDFIFFRHHRYVFRNNKRVG------------------------LKDLGPRFTLKLR 293
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHK EM+TSRR+F L
Sbjct: 294 SLQKGTFDSKYGEYEWVHKRKEMETSRRKFSL 325
>gi|260823916|ref|XP_002606914.1| hypothetical protein BRAFLDRAFT_60335 [Branchiostoma floridae]
gi|229292259|gb|EEN62924.1| hypothetical protein BRAFLDRAFT_60335 [Branchiostoma floridae]
Length = 288
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 170/272 (62%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET+ P D+E+ DE +S + PK+LIT+ + F+
Sbjct: 41 VPKTIENMRVFDETMVDPQDEEVLHDEAHDEMASYFTRDSRPKVLITSSDRPRSTTTRFL 100
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL IPNS Y R DLKK+I A K+FT IIV++ +RR+P+ +L+ LPDGPTAH
Sbjct: 101 KELGQCIPNSEIYYRRGLDLKKVIPQALAKEFTDIIVINEDRRKPNGMLLCHLPDGPTAH 160
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FK+S + L +IK T H PE++LNNF TRLGH VGR+ +LFP P+F GR+ VTF
Sbjct: 161 FKISNVKLHDEIKRAPKSTEHHPEVILNNFNTRLGHTVGRMFAALFPHDPQFSGRQAVTF 220
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRY+F+ + G L E GPRFTLKL
Sbjct: 221 HNQRDFIFFRHHRYLFKNNKRVG------------------------LNELGPRFTLKLR 256
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHK EMDTSRR+FFL
Sbjct: 257 SLQKGTFDSKFGEYEWVHKRHEMDTSRRKFFL 288
>gi|159467973|ref|XP_001692157.1| hypothetical protein CHLREDRAFT_115941 [Chlamydomonas reinhardtii]
gi|158278343|gb|EDP04107.1| predicted protein [Chlamydomonas reinhardtii]
Length = 309
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/268 (52%), Positives = 173/268 (64%), Gaps = 11/268 (4%)
Query: 5 TIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISEL 64
TI+N RE D+T+ P D+E+ A + DEF++ PK+LITT S F+SE+
Sbjct: 53 TIDNQREADDTMVDPTDEEIMADENDDEFAAHFANARPPKVLITTSYKPSKIMYTFLSEM 112
Query: 65 LSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKL 124
L V GT+ L +A + + T + + LL++ LPDGPTAHF+L
Sbjct: 113 LLVPRCCCPLPHGTWSLSASFTHAHASISHAPPCIPT---QINGLLLVHLPDGPTAHFRL 169
Query: 125 SKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 184
S L L DIK HG T H PEL+LN+F TRLGHR+GR+ SLFPQ P+FRGRRVVTFHNQ
Sbjct: 170 SNLKLGADIKGHGRATQHKPELILNHFDTRLGHRMGRMFASLFPQDPQFRGRRVVTFHNQ 229
Query: 185 RDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 244
RDFIF RHHRY+FE KES+ + AKD +K + V+ RLQE GPRFTLKL SLQ
Sbjct: 230 RDFIFVRHHRYVFEEKESR-----DRAAKDPSKKKKA---VVARLQELGPRFTLKLQSLQ 281
Query: 245 HGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
GTFD+K GEFEW+ K E TSRRRFFL
Sbjct: 282 KGTFDSKNGEFEWLPKKENKTSRRRFFL 309
>gi|449683354|ref|XP_004210333.1| PREDICTED: ribosome production factor 1-like [Hydra magnipapillata]
Length = 366
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/271 (49%), Positives = 177/271 (65%), Gaps = 26/271 (9%)
Query: 4 RTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTC-RFNSNRGPAFIS 62
+T++N R DET +D+E+ DE +S K PK+L TTC R + FI
Sbjct: 120 KTLDNMRVKDETFVDIEDEEILQDTMTDEMASYFKGEQVPKVLFTTCNRPKCHETLNFIE 179
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L+ ++PNS Y R DLKKII A ++ FT +++++ ++++ + L+I LP+GPTAHF
Sbjct: 180 DLVKIVPNSEYRNRKGIDLKKIIPQAVERGFTDLVIINEDQKKANGLIISHLPNGPTAHF 239
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KLS + +DIKNHG + H PEL+LNNF TRLGH V RL+ +LFP P+F+GRR VTFH
Sbjct: 240 KLSSVRKIRDIKNHGKTSQHRPELILNNFNTRLGHSVARLLAALFPYDPQFQGRRAVTFH 299
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRY+F+ NGKK T LQE GPRFTLKL S
Sbjct: 300 NQRDFIFFRHHRYVFK---------NGKK---------------TGLQELGPRFTLKLRS 335
Query: 243 LQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
LQ G+FD+K GE+EW+HK +MDTSRR+F L
Sbjct: 336 LQKGSFDSKYGEYEWIHKRKDMDTSRRKFHL 366
>gi|318037205|ref|NP_001188154.1| ribosome production factor 1 [Ictalurus punctatus]
gi|308323466|gb|ADO28869.1| ribosome production factor 1 [Ictalurus punctatus]
Length = 350
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/273 (49%), Positives = 174/273 (63%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEFS+ + PK+LITT R F
Sbjct: 102 VPKTIENQRIHDETTVDPEDEEVAFDEGTDEFSAYFNKLINPKVLITTSDRPRGRTVRFC 161
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPN+H Y R LK+II +DFT ++V++ +R+ P+ +++ LPDG TAH
Sbjct: 162 EQLATVIPNAHVYYRRGLALKRIIPQCVSRDFTYLMVINEDRKVPNGMVLCHLPDGSTAH 221
Query: 122 FKLSKLVLRKDIKNHGN-PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G PT H PE++LNNF TRLGH +GRL +LFPQ P+F GR+V T
Sbjct: 222 FKVSSVRLRKEMKRKGKAPTEHYPEVILNNFTTRLGHNIGRLFAALFPQDPQFVGRQVAT 281
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 282 FHNQRDFIFFRFHRYIFKNEKKVG------------------------IQELGPRFTLKL 317
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHK EMDTSRR+F L
Sbjct: 318 RSLQKGTFDSKFGEYEWVHKRHEMDTSRRKFHL 350
>gi|284009752|ref|NP_001165011.1| ribosome production factor 1 homolog [Xenopus (Silurana)
tropicalis]
gi|89272523|emb|CAJ83459.1| brix domain containing 5 [Xenopus (Silurana) tropicalis]
gi|110645366|gb|AAI18765.1| Unknown (protein for MGC:145697) [Xenopus (Silurana) tropicalis]
Length = 342
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 172/273 (63%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P D+E+ DEF+ + PKILITT R F
Sbjct: 94 VPKTIENQRVYDETTVDPADEEVALDEAIDEFAPYFNKQTTPKILITTSDRPRGRTVRFT 153
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L SVIPNS Y R LKK+I +D+T +I+++ +R+ P+ L+ LPDGPTAH
Sbjct: 154 EQLSSVIPNSDVYYRRGLALKKVIPQCISRDYTDLIIINEDRKVPNGLVFCHLPDGPTAH 213
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G PT H PE++LNNF TRLGH +GR+ SL+P P+F GR+V T
Sbjct: 214 FKMSNVRLRKEMKRKGKEPTEHKPEVILNNFTTRLGHSIGRMFASLYPHDPQFTGRQVAT 273
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR+HRYIF++++ G +QE GPRFTLKL
Sbjct: 274 FHNQRDYIFFRYHRYIFKSEKKVG------------------------IQELGPRFTLKL 309
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHK EMDTSRR+F L
Sbjct: 310 RSLQKGTFDSKYGEYEWVHKRHEMDTSRRKFHL 342
>gi|148226302|ref|NP_001080272.1| ribosome production factor 1 [Xenopus laevis]
gi|71153722|sp|Q8AVP1.1|RPF1_XENLA RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|27371215|gb|AAH41557.1| Rpf1-pending-prov protein [Xenopus laevis]
Length = 343
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 172/273 (63%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P D+E+ DEF+ + PKILITT R F
Sbjct: 95 VPKTIENQRVYDETTVDPADEEVALDEATDEFAPYFNKQTTPKILITTSDRPRGRSVRFT 154
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L S+IPNS Y R LKKII +D+T ++V++ +R+ P+ L++ LPDGPTAH
Sbjct: 155 EQLSSIIPNSDVYYRRGLALKKIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAH 214
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G PT H PE++LNNF TRLGH +GR+ SL+P P F GR+V T
Sbjct: 215 FKISNVRLRKEMKRKGKEPTEHKPEVILNNFTTRLGHSIGRMFASLYPHDPHFVGRQVAT 274
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR+HRY+F++++ G +QE GPRFTLKL
Sbjct: 275 FHNQRDYIFFRYHRYLFKSEKKVG------------------------IQELGPRFTLKL 310
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHK EMDTSRR+F L
Sbjct: 311 RSLQKGTFDSKYGEYEWVHKRHEMDTSRRKFHL 343
>gi|384247111|gb|EIE20599.1| Brix-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 288
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/271 (49%), Positives = 181/271 (66%), Gaps = 15/271 (5%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIENTRE D T+ P+D ++ A + DEF+S + +P +L+TT S F+
Sbjct: 33 VPKTIENTREKDVTMIAPEDADVEADDADDEFASYFNREQSPNVLLTTSYRPSKLMFQFL 92
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+E+L V+P + +YKR LKKI++YA K FT + V + +R++ + LL+I LP GPTAH
Sbjct: 93 AEMLEVLPCATFYKRQGLALKKIVKYATAKGFTDVAVFNEDRKQVNGLLLIHLPGGPTAH 152
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F++S L L K+IK HG PEL+LN+F TRLGHR+GR++ SLF Q P F+ R+V TF
Sbjct: 153 FRISSLKLSKEIKGHGRAAHMKPELILNHFDTRLGHRLGRMLASLFHQDPNFKSRQVATF 212
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD IFFRHHRYIFE K+ DA +V+ RLQE GPRFTLKL
Sbjct: 213 HNQRDCIFFRHHRYIFEEKKKGKEDA---------------PQVVARLQELGPRFTLKLQ 257
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ GTFD+K GEFE+++K +M +RRRFF+
Sbjct: 258 SLQTGTFDSKEGEFEFIYKSKMHQNRRRFFI 288
>gi|449276923|gb|EMC85273.1| Ribosome production factor 1, partial [Columba livia]
Length = 254
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 174/272 (63%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TIEN R DET +D+E+ DEF+ + PKILITT R F
Sbjct: 7 PKTIENQRVYDETTVDLNDEEVAFDEATDEFAPYFNRQTVPKILITTSDRPRGRTVRFCE 66
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L +VIPNSH Y R LK+II +DFT +IV++ +R+ P+ L++ LPDGPTAHF
Sbjct: 67 QLSTVIPNSHVYYRRGLALKRIIPQCIARDFTDLIVINEDRKIPNGLVLSHLPDGPTAHF 126
Query: 123 KLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
++S + LRK+IK G PT H PE++LNNF TRLGH VGR++ LFP SP+F GR+V TF
Sbjct: 127 RMSSVRLRKEIKRKGKEPTEHTPEVILNNFTTRLGHPVGRMLACLFPHSPQFIGRQVATF 186
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 187 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 222
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EW+HK EMDTSRR+F L
Sbjct: 223 SLQKGTFDSKFGEYEWIHKRREMDTSRRKFHL 254
>gi|340380390|ref|XP_003388705.1| PREDICTED: ribosome production factor 1-like [Amphimedon
queenslandica]
Length = 322
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/271 (48%), Positives = 167/271 (61%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+T+E+TREP+ET DD E+ DEFS + +PKILIT+ R +
Sbjct: 76 PKTLESTREPEETTVLADDPEILQDEKTDEFSGYFDRKTSPKILITSFTRAHLRSNLLMR 135
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL IPNS R ++K II A ++D+T II++ NR+ P L +I LP+GPTA+F
Sbjct: 136 ELADCIPNSDMKWRRGSEIKSIIPEAIERDYTDIIIIEENRKIPSGLWLIHLPEGPTAYF 195
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KL+ ++IK HG PT H PE++LN F+T+LGH +GR+ SLFPQ P F+GRR VTFH
Sbjct: 196 KLTNYKRGREIKGHGTPTSHYPEVILNRFSTKLGHTIGRMFASLFPQDPNFKGRRAVTFH 255
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRYIF G LQE GPRFTLKL +
Sbjct: 256 NQRDFIFFRHHRYIFRDSLRVG------------------------LQELGPRFTLKLRT 291
Query: 243 LQHGTFDTKGGEFEWVH-KPEMDTSRRRFFL 272
LQ GTFDTK G++ W+H + +MDTSRRRF L
Sbjct: 292 LQKGTFDTKFGQYMWMHNRKKMDTSRRRFHL 322
>gi|145341264|ref|XP_001415733.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575956|gb|ABO94025.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 177/279 (63%), Gaps = 21/279 (7%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDA-DEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R D T +D DA DEF+S Q +PKI+ITT R S F+
Sbjct: 53 PKTIENQRVRDATHIDDLNDVDVVEQDAEDEFASYFSQATSPKIIITTSRKPSGDMFKFL 112
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR-----EPDALLIIGLPD 116
L +VIPN++YY R Y +K+I+++ + FT ++V + N++ + +L + LP+
Sbjct: 113 ENLFTVIPNAYYYARRNYQVKEIVKHGTARGFTDVLVFNENKKFSKGARVNGMLHVHLPE 172
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPT +KLS L L K+IK HG T H PEL+LNNF+TRLGHRV R+ S+FPQ PEF+GR
Sbjct: 173 GPTCLYKLSSLKLSKEIKGHGRATSHYPELILNNFSTRLGHRVSRMFASVFPQKPEFKGR 232
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
RVVTFHNQRDFIFFRHHRY+FE K KDA+ + RLQE GPRF
Sbjct: 233 RVVTFHNQRDFIFFRHHRYVFEEK------------KDAEKPPPVNTMIQARLQELGPRF 280
Query: 237 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTS---RRRFFL 272
TL+L+S+Q GTFD+K GE+E+V + D + RR+F L
Sbjct: 281 TLRLMSVQKGTFDSKHGEYEYVRSTDTDGTRHCRRKFVL 319
>gi|403376069|gb|EJY88014.1| Brix domain containing protein [Oxytricha trifallax]
Length = 452
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 126/270 (46%), Positives = 172/270 (63%), Gaps = 24/270 (8%)
Query: 4 RTIENTREPDETVCRPDDDELFAG-NDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
+TIE+ R DET+ + DDE G D DEF+ K PKIL+TT R F+
Sbjct: 206 KTIESMRVADETLIQEGDDEEIKGEQDMDEFNKYFKNETKPKILMTTNRRPKGNLFDFLK 265
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
E+ +PN+ YY+R + +K+II++AK +DFT ++V + P L++ LPDGPTA F
Sbjct: 266 EVKEAVPNTEYYERKNFRIKQIIDWAKGRDFTDVMVFYEKHGNPHTLIMSHLPDGPTASF 325
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
++S + LR +I +H P+ + PEL+LNNF T LGHR+GR++ +L+PQ+PEFRGRRVVTFH
Sbjct: 326 RVSGVKLRAEIYHHAVPSSYNPELILNNFDTMLGHRIGRMLAALYPQNPEFRGRRVVTFH 385
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFR HRY F + + LQE GPRFTLKL S
Sbjct: 386 NQRDFIFFRQHRYEFTEDHQRAN-----------------------LQEIGPRFTLKLHS 422
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ GT DTK GEFE+++KP+M +R++FF+
Sbjct: 423 LQLGTLDTKFGEFEFIYKPKMGVNRKQFFM 452
>gi|299471886|emb|CBN77056.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 307
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 172/271 (63%), Gaps = 17/271 (6%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+T+E+TR+PD TV +P DDE+F DEF+ PKI+ITT S F+
Sbjct: 53 PKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQTPKIMITTRPRPSGNLFHFVQ 112
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L+ +IPN+ +Y R ++ +K+I ++A K FT + V+ + + L++ LP GPTA F
Sbjct: 113 DLMRMIPNAFFYPRKSFTVKQICQWADNKKFTHLFVISERLKICNGLIVSVLPHGPTAFF 172
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K+S ++ ++ NHG T H PE++LNNF TRLGHRVGR + S FP PEF GR+VVTFH
Sbjct: 173 KVSNVIPSTEVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPHEPEFNGRQVVTFH 232
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IF R HRYIF A GK D K K RLQE GPRFTLK+
Sbjct: 233 NQRDYIFVRFHRYIF---------AEGKGEGDTK-------KTRARLQELGPRFTLKMRW 276
Query: 243 LQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
LQ GTFDT+ GE+EW+HK EMD++RR F L
Sbjct: 277 LQEGTFDTQYGEYEWIHKRKEMDSTRRTFHL 307
>gi|71153716|sp|Q6IQU6.1|RPF1_DANRE RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
gi|47937837|gb|AAH71307.1| Brix domain containing 5 [Danio rerio]
Length = 330
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 174/273 (63%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEFS+ + PK+LITT R F
Sbjct: 82 VPKTIENQRIYDETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFC 141
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+++ Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAH
Sbjct: 142 DQLATVIPHAYVYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAH 201
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G NPT H PE++LNNF TRLGH +GRL +LFP P+F GR+V T
Sbjct: 202 FKVSSVRLRKEMKRRGKNPTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVAT 261
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 262 FHNQRDFIFFRFHRYIFKNEKKVG------------------------IQELGPRFTLKL 297
Query: 241 VSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHK EMD+SRR+F L
Sbjct: 298 RSLQKGTFDSKFGEYEWVHKRHEMDSSRRKFHL 330
>gi|427788153|gb|JAA59528.1| Putative ribosome bioproteinsis protein rpf1 [Rhipicephalus
pulchellus]
Length = 310
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/271 (48%), Positives = 173/271 (63%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIENTREPD+T+ + DD+E+ DE ++ ++ PK+LITT R F
Sbjct: 64 PRTIENTREPDDTMVQADDEEVQLDEAMDEMAAYFRKEYVPKLLITTSDNPHTRTIKFCR 123
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL IPN+ + R +KK +E+A ++ ++ I V++ +RR P+ LL+ LPDGPTA+F
Sbjct: 124 ELKQSIPNADFRWRNRSRIKKTVEHAIERGYSDIAVINEDRRHPNGLLLTHLPDGPTAYF 183
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
++S + KDIK + H PE++LNNF TRLGH V R++ SLF P+F+GRRVVTFH
Sbjct: 184 RISNVKFCKDIKGRAAYSAHRPEVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTFH 243
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IFFRHHRY F +EK S +QE GPRFTL+L S
Sbjct: 244 NQRDYIFFRHHRYEFRN-----------------AEKVS-------IQEIGPRFTLRLKS 279
Query: 243 LQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFD+K GE+EWV K EM+TSRRRFFL
Sbjct: 280 LQKGTFDSKFGEYEWVLKRHEMETSRRRFFL 310
>gi|349501004|ref|NP_001002160.2| ribosome production factor 1 isoform 1 [Danio rerio]
Length = 355
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 174/273 (63%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEFS+ + PK+LITT R F
Sbjct: 107 VPKTIENQRIYDETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFC 166
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+++ Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAH
Sbjct: 167 DQLATVIPHAYVYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAH 226
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G NPT H PE++LNNF TRLGH +GRL +LFP P+F GR+V T
Sbjct: 227 FKVSSVRLRKEMKRRGKNPTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVAT 286
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 287 FHNQRDFIFFRFHRYIFKNEKKVG------------------------IQELGPRFTLKL 322
Query: 241 VSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EWVHK EMD+SRR+F L
Sbjct: 323 RSLQKGTFDSKFGEYEWVHKRHEMDSSRRKFHL 355
>gi|327276707|ref|XP_003223109.1| PREDICTED: ribosome production factor 1-like [Anolis carolinensis]
Length = 335
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/273 (49%), Positives = 171/273 (62%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEF+ + PKILITT R F
Sbjct: 87 VPKTIENQRVYDETTVDPNDEEVALDEATDEFAPYFNRQTIPKILITTSDRPRGRTVRFC 146
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L + IPNSH Y R LK +I +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 147 EQLSTCIPNSHVYYRRGLALKNVIPQCIARDFTDMIVINEDRKIPNGLVLSHLPEGPTAH 206
Query: 122 FKLSKLVLRKDIKNHGN-PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + LRK+IK G PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V T
Sbjct: 207 FRMSSVRLRKEIKRKGKAPTEHQPEIILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVAT 266
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF K+EK +QE GPRFTLKL
Sbjct: 267 FHNQRDYIFFRFHRYIF------------------KNEKR------VAIQEVGPRFTLKL 302
Query: 241 VSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EW+HK EMDTSRR+F L
Sbjct: 303 RSLQKGTFDSKFGEYEWIHKRREMDTSRRKFHL 335
>gi|71153721|sp|Q5RJS9.2|RPF1_RAT RecName: Full=Ribosome production factor 1; AltName: Full=Brix
domain-containing protein 5; AltName: Full=Ribosome
biogenesis protein RPF1
Length = 345
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/260 (48%), Positives = 168/260 (64%), Gaps = 25/260 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHK 260
SLQ GTFD+K GE+EWVHK
Sbjct: 317 RSLQKGTFDSKYGEYEWVHK 336
>gi|390367918|ref|XP_796791.3| PREDICTED: ribosome production factor 1-like, partial
[Strongylocentrotus purpuratus]
Length = 278
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 169/272 (62%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET+ P+D+E+ DE + + PK+LITT +
Sbjct: 31 VPKTIENMRVFDETMVNPEDEEVTYDEATDEMAPYFNRETLPKVLITTSDKAAWTTRRLC 90
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL S IPNS + R LK+II+ A++KDFT +IV++ +R + + ++I PDGPT H
Sbjct: 91 KELSSCIPNSEVHHRRHLPLKRIIKSAQEKDFTDLIVINNDRGKANGMVISHFPDGPTCH 150
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
+K+S + LR+DIK G PT H PEL+LNNF TRLGH +GR I +LFP P F GRRVVTF
Sbjct: 151 YKMSNVKLRQDIKRCGKPTDHQPELILNNFNTRLGHSIGRQIAALFPHDPNFVGRRVVTF 210
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDF+FFRHHRY+F+ + G LQE GPRFTLKL
Sbjct: 211 HNQRDFVFFRHHRYVFKDNKKVG------------------------LQELGPRFTLKLR 246
Query: 242 SLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
S Q GTF +K GE+EWVHK EMD+SRR+F L
Sbjct: 247 SFQKGTFVSKFGEYEWVHKRHEMDSSRRKFHL 278
>gi|348530174|ref|XP_003452586.1| PREDICTED: ribosome production factor 1-like [Oreochromis
niloticus]
Length = 349
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 171/273 (62%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEFS+ PK+LITT R F
Sbjct: 101 VPKTIENQRVYDETTVDPEDEEIAFDEGTDEFSAYFNGLTNPKVLITTSDRPRGRTVRFC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPN+H Y R LK+II ++FT ++V++ +R+ P+ +++ LP+GPTAH
Sbjct: 161 EQLATVIPNAHVYYRRGLALKRIIPQCVARNFTYLMVINEDRQVPNGMVLCHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G NPT H PE++LNNF TRLGH +GRL +LFPQ P F GR+V T
Sbjct: 221 FKVSSVRLRKEMKRRGKNPTEHYPEVILNNFTTRLGHTIGRLFAALFPQEPHFVGRQVAT 280
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 281 FHNQRDFIFFRFHRYIFKNEKKVG------------------------IQELGPRFTLKL 316
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWV K EM+ RR+F L
Sbjct: 317 RSLQKGTFDSKYGEYEWVMKRHEMEACRRKFQL 349
>gi|55824741|gb|AAH86515.1| Bxdc5 protein, partial [Rattus norvegicus]
Length = 344
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 127/260 (48%), Positives = 168/260 (64%), Gaps = 25/260 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 100 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 159
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 160 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 219
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 220 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 279
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 280 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 315
Query: 241 VSLQHGTFDTKGGEFEWVHK 260
SLQ GTFD+K GE+EWVHK
Sbjct: 316 RSLQKGTFDSKYGEYEWVHK 335
>gi|324518755|gb|ADY47195.1| Brix domain-containing protein [Ascaris suum]
Length = 317
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 166/271 (61%), Gaps = 24/271 (8%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TIENTRE D T+ DD+E+ DE SS + PK+LITT + F
Sbjct: 70 PKTIENTREYDLTMVEADDEEVLHDEANDEMSSYFNREIKPKVLITTSPYAKVNTFKFCY 129
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
E+ IPN+ + R LKK+++ AK+ ++T +IVVH +R+ P+ +++ LPDGPTA F
Sbjct: 130 EMQKCIPNAEVFTRKGIALKKVVKQAKQNEYTDLIVVHEDRKMPNGIVLCHLPDGPTAFF 189
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K++ L KDIK G T H PE++LNNF TRLGH V R+ LFP P F GRRVVTFH
Sbjct: 190 KINSLKFTKDIKRKGETTSHNPEVILNNFNTRLGHTVARMFACLFPFEPMFTGRRVVTFH 249
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IFFRHHRY F+ + K + L E GPRFTL+L
Sbjct: 250 NQRDYIFFRHHRYEFKREGEKAA-----------------------LLELGPRFTLRLKW 286
Query: 243 LQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFDT+ GE+EWV K EM+TSRRRFFL
Sbjct: 287 LQKGTFDTRCGEYEWVLKRHEMETSRRRFFL 317
>gi|344242508|gb|EGV98611.1| Ribosome production factor 1 [Cricetulus griseus]
Length = 590
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/260 (48%), Positives = 167/260 (64%), Gaps = 25/260 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P D+E+ DEF+S + +PKILITT R
Sbjct: 66 VPKTIDNQRVYDETTVDPTDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 125
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 126 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 185
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK+IK G +PT H+PE++LNNF TRLGH +GR+ SLFP +P+F GR+V T
Sbjct: 186 FKMSSVRLRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVAT 245
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 246 FHNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKL 281
Query: 241 VSLQHGTFDTKGGEFEWVHK 260
SLQ GTFD+K GE+EWVHK
Sbjct: 282 RSLQKGTFDSKYGEYEWVHK 301
>gi|410921642|ref|XP_003974292.1| PREDICTED: ribosome production factor 1-like [Takifugu rubripes]
Length = 351
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 172/273 (63%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P D+E+ DEFS+ PK+LITT R F
Sbjct: 103 VPKTIENQRVYDETTVDPADEEVAFDEATDEFSAYFHGLTNPKVLITTSDRPRGRTVKFC 162
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
++L SVIPN+H + R LK+II +DFT ++V++ +R+ P+ +++ LP+GPTAH
Sbjct: 163 NQLASVIPNAHVFYRRGLALKRIIPQCISRDFTYLMVINEDRKVPNGMVLCHLPEGPTAH 222
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G PT H PE++LNNF TRLGH +GR+ +LFPQ+P+F GR+V T
Sbjct: 223 FKVSNVRLRKEMKRRGKEPTDHYPEVILNNFTTRLGHSIGRMFAALFPQNPQFLGRQVAT 282
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDF+FFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 283 FHNQRDFVFFRFHRYIFKNEKKVG------------------------IQELGPRFTLKL 318
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWV K EMD RR+F L
Sbjct: 319 RSLQKGTFDSKYGEYEWVLKRHEMDACRRKFQL 351
>gi|346470829|gb|AEO35259.1| hypothetical protein [Amblyomma maculatum]
Length = 310
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/272 (48%), Positives = 172/272 (63%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PRTIENTREPD+T+ + DD+E+ DE ++ K+ PK+LITT R F
Sbjct: 63 VPRTIENTREPDDTMVQQDDEEVQLDEAMDEMAAYFKKEYIPKLLITTSDNPHTRTIRFC 122
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E+ IPN+ + R +KK +E A ++ ++ I V++ +RR P+ LL+ LPDGPTA+
Sbjct: 123 REIKQSIPNADFRWRNRSRIKKTVEQAIERGYSDIAVINEDRRHPNGLLLTHLPDGPTAY 182
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F++S + KDIK + H PE++LNNF TRLGH V R++ SLF P+F+GRRVVTF
Sbjct: 183 FRISSVKFCKDIKGRAAYSVHRPEVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTF 242
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFRHHRY F +EK S +QE GPRFTL+L
Sbjct: 243 HNQRDYIFFRHHRYEFRN-----------------AEKVS-------IQEIGPRFTLRLK 278
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWV K EM+TSRRRFFL
Sbjct: 279 SLQKGTFDSKFGEYEWVLKRHEMETSRRRFFL 310
>gi|325181431|emb|CCA15847.1| ribosome production factor 1 putative [Albugo laibachii Nc14]
gi|325193038|emb|CCA27409.1| ribosome production factor 1 putative [Albugo laibachii Nc14]
Length = 331
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/275 (47%), Positives = 179/275 (65%), Gaps = 28/275 (10%)
Query: 3 PRTIENTREPDETVCRPDDDE----LFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 58
PRTI+NTREP+ T+ +++ ++ DEF++I PKI+ITT F S
Sbjct: 80 PRTIDNTREPNVTMINAENENENEEIYQDERDDEFAAIFSDQTTPKIMITTRPFPSGELY 139
Query: 59 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
FI+EL+ +IPNS YYKRG +++K+I ++A K FT +IV+ + + +L+ LP GP
Sbjct: 140 HFINELMQLIPNSFYYKRGRFNIKEICQFASNKLFTHLIVLSEKSKVCNGMLLSRLPSGP 199
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
T+ FK+S + L++ I +HG T H PE++LNNF+TRLG R+GR + S F Q PEF+GR+V
Sbjct: 200 TSFFKVSNVKLQESITDHGRRTDHQPEIILNNFSTRLGRRIGRFLGSCFRQQPEFQGRQV 259
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
VTFHNQRDFIF RHHRYIF D NGK+A RLQE GP FT+
Sbjct: 260 VTFHNQRDFIFIRHHRYIF--------DENGKRA---------------RLQEIGPSFTI 296
Query: 239 KLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
KL LQ GTFDTK GE+EW+ + + +TSR+RF+L
Sbjct: 297 KLKWLQDGTFDTKYGEYEWIARSYKQNTSRKRFYL 331
>gi|391342960|ref|XP_003745783.1| PREDICTED: ribosome production factor 1-like [Metaseiulus
occidentalis]
Length = 300
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/271 (50%), Positives = 171/271 (63%), Gaps = 24/271 (8%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRT+ENTRE DETV D+E+ + DEF+S + PKIL+TT + F
Sbjct: 53 PRTLENTREYDETVVEAGDEEVELDDQTDEFASYFNKEYVPKILLTTVDKPRGKTIKFCR 112
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL V+PN+ + R LKK I A ++ FT +VV+ +R P LL+I LP+GPTA++
Sbjct: 113 ELELVLPNAEFKYRNYAHLKKTIPKAIERGFTDFLVVNEHRGAPSGLLVIHLPEGPTAYY 172
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K+S + DIK+ T H PE++LNNF TRLGH V R++ LF +PEF GRRVVTFH
Sbjct: 173 KISSVKPMTDIKHAAQFTSHRPEVLLNNFGTRLGHSVSRMLACLFHYNPEFHGRRVVTFH 232
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFRHHRY F D++G+K RLQE GPRFTLKL S
Sbjct: 233 NQRDFIFFRHHRYEF--------DSDGQKC---------------RLQEIGPRFTLKLQS 269
Query: 243 LQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
LQ GTFD+K GE+EW+ K EM+TSRRRFFL
Sbjct: 270 LQKGTFDSKYGEYEWILKRHEMETSRRRFFL 300
>gi|225708124|gb|ACO09908.1| Ribosome production factor 1 [Osmerus mordax]
Length = 355
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 171/273 (62%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEFS+ + PK+LITT R F
Sbjct: 107 VPKTIENQRVYDETTVDPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFC 166
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP++H Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAH
Sbjct: 167 GQLATVIPDAHVYYRRGLALKKVIPQCIARGFTYLMVINEDRKVPNGMVLCHLPDGPTAH 226
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G +PT H PE++LNNF TRLGH +GRL +LFP P+F GR+V T
Sbjct: 227 FKVSSVRLRKEMKRRGKDPTEHTPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVAT 286
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 287 FHNQRDFIFFRFHRYIFKNEKRVG------------------------IQELGPRFTLKL 322
Query: 241 VSLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ GTFD+K GE+EWV K EMD RRRF L
Sbjct: 323 RSLQKGTFDSKFGEYEWVLKRHEMDACRRRFNL 355
>gi|301792581|ref|XP_002931257.1| PREDICTED: ribosome production factor 1-like, partial [Ailuropoda
melanoleuca]
Length = 227
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/245 (52%), Positives = 162/245 (66%), Gaps = 26/245 (10%)
Query: 30 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DEF+S + +PKILITT R +L +VIPNSH Y R LKKII
Sbjct: 7 TDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCT 66
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVL 148
+DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++L
Sbjct: 67 SRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIIL 126
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NNF TRLGH VGR+ SLFP +P+F GR+V TFHNQRD+IFFR HRYIF +++ G
Sbjct: 127 NNFTTRLGHSVGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFRSEKKVG---- 182
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSR 267
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSR
Sbjct: 183 --------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSR 222
Query: 268 RRFFL 272
R+F L
Sbjct: 223 RKFHL 227
>gi|313228457|emb|CBY23608.1| unnamed protein product [Oikopleura dioica]
Length = 415
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/278 (49%), Positives = 173/278 (62%), Gaps = 35/278 (12%)
Query: 4 RTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA--FI 61
+TIE+ R+ DET PDD E+ DE S G PKILI T N+ +GP
Sbjct: 164 KTIESMRKFDETTVEPDDAEVDWEEQNDELSDYFNNGTVPKILIMTR--NAPKGPMVKMC 221
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE-PDALLIIGLPDGPTA 120
ELL IPNS ++ R + LKKII A KK FT++IVV +R+ P+ L II LP GPTA
Sbjct: 222 HELLKTIPNSQFFFRQGFALKKIIPQAIKKGFTAMIVVSADRKWVPNDLKIIYLPGGPTA 281
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFK+S + LR+ K PT H+PEL+LNNF +RLG R+GR+ +LFPQ PEF GR+VVT
Sbjct: 282 HFKMSSVRLREKTKGGDTPTTHLPELILNNFKSRLGRRIGRMFAALFPQVPEFEGRQVVT 341
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G L+E GPRFTLKL
Sbjct: 342 FHNQRDYIFFRQHRYIFRSEKRAG------------------------LKELGPRFTLKL 377
Query: 241 VSLQHGTFDTKGGEFEWVH-KPEMDT-----SRRRFFL 272
SLQ GTFD+K GEFE+ H + EMDT S+++FFL
Sbjct: 378 RSLQKGTFDSKYGEFEYEHRRKEMDTEGHGYSKKKFFL 415
>gi|170590770|ref|XP_001900144.1| Brix domain containing protein [Brugia malayi]
gi|158592294|gb|EDP30894.1| Brix domain containing protein [Brugia malayi]
Length = 334
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 165/271 (60%), Gaps = 24/271 (8%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIE+TRE D TV DD E+ DE S+ PKILITT + F
Sbjct: 87 PRTIESTREFDITVIEDDDQEVQHDEANDEMSTYFNDEIPPKILITTSPYAKVNTFKFCY 146
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL IPN+ + R LKK+++ AK K++T +IVVH +R+ P+ +++ LPDGPTA F
Sbjct: 147 ELQKCIPNADIFTRKGIPLKKVVKQAKSKEYTDLIVVHEDRKIPNGIVLCHLPDGPTAFF 206
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K++ L K++K G T H PE+VLNNF TRLGH + R+ LFPQ P + GRRVVTFH
Sbjct: 207 KINSLTFTKNLKKKGESTVHYPEIVLNNFNTRLGHTIARMFACLFPQKPMYSGRRVVTFH 266
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IFFRHHRY F+ + K + L E GPRFTL+L
Sbjct: 267 NQRDYIFFRHHRYEFKREGEKAA-----------------------LLELGPRFTLRLKW 303
Query: 243 LQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFDT+ GE+EWV K EM++SRRRFFL
Sbjct: 304 LQKGTFDTRYGEYEWVLKRHEMESSRRRFFL 334
>gi|47225736|emb|CAG08079.1| unnamed protein product [Tetraodon nigroviridis]
Length = 339
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 165/260 (63%), Gaps = 25/260 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P D+E+ DEFSS PK+LITT R F
Sbjct: 104 VPKTIENQRVYDETTVDPADEEVAFDEGTDEFSSYFNGLTNPKVLITTSDRPRGRTVKFC 163
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
++L +VIPN+H Y R LK+II +DFT +IV++ +R+ P+ +++ LP+GPTAH
Sbjct: 164 NQLATVIPNAHVYYRRGLALKRIIPQCVSRDFTYLIVINEDRKVPNGMVLCHLPEGPTAH 223
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G +PT H PE++LNNF TRLGH +GR+ +LFPQ+P+F GR+V T
Sbjct: 224 FKVSSVRLRKEMKRRGKDPTEHYPEVILNNFTTRLGHSIGRMFAALFPQNPQFLGRQVAT 283
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDF+FFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 284 FHNQRDFVFFRFHRYIFKNEKKVG------------------------IQELGPRFTLKL 319
Query: 241 VSLQHGTFDTKGGEFEWVHK 260
SLQ GTFD+K GE+EWV K
Sbjct: 320 RSLQKGTFDSKFGEYEWVLK 339
>gi|225711962|gb|ACO11827.1| Ribosome production factor 1 [Lepeophtheirus salmonis]
Length = 359
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/287 (44%), Positives = 173/287 (60%), Gaps = 39/287 (13%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGND-----------ADEFSSILKQGCAPKILITT 49
+ PRTIENTRE DET + E ND DEF + + PK++IT+
Sbjct: 97 LVPRTIENTREYDETTVKDTPTEETTTNDDENAEVQWDILNDEFKTYFDKSYVPKVIITS 156
Query: 50 CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDAL 109
R F+ EL +IPN+ + R +KK+IE K++ +T ++V++ N R+P+ +
Sbjct: 157 GDNPHTRTITFMKELSRMIPNAELFWRNRSAMKKMIEDGKERGYTDVVVINENNRKPNGM 216
Query: 110 LIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 168
++ LPDGPTAHFKLS + K++K N N T H PE++LNNF TRLGH +GR++ SLF
Sbjct: 217 VVSHLPDGPTAHFKLSNVKATKEMKKNWRNITSHRPEVILNNFTTRLGHSIGRMLASLFH 276
Query: 169 QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR 228
PEFRG+R VTFHNQRD++FFRHHRY F+ E +
Sbjct: 277 YEPEFRGQRAVTFHNQRDYMFFRHHRYEFKNSEK------------------------VK 312
Query: 229 LQECGPRFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
L+E GPRFTLKL SLQ GTFD+K GE+EW+ + EM+TSRRRFFL
Sbjct: 313 LKELGPRFTLKLRSLQKGTFDSKLGEYEWMITGRRHEMETSRRRFFL 359
>gi|308510370|ref|XP_003117368.1| hypothetical protein CRE_01895 [Caenorhabditis remanei]
gi|308242282|gb|EFO86234.1| hypothetical protein CRE_01895 [Caenorhabditis remanei]
Length = 382
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 165/272 (60%), Gaps = 24/272 (8%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE+ RE D T+ DDE+ DEF+ + PK++IT F
Sbjct: 134 VPKTIESMREYDATMVDEQDDEVEHDEANDEFAPYFNRETTPKVMITMTPKAKITTFKFC 193
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL IPNS + R LK IIE AK+++FT ++VVH +R++P+ ++ LP+GPTA+
Sbjct: 194 FELQKCIPNSEMFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGPTAY 253
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FK++ L +D+K G T H PE++LNNF TRLGH + R++ LFP P+F GRRVVTF
Sbjct: 254 FKINSLTFTQDLKKFGESTAHFPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRVVTF 313
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFRHHRY F+ + +K + L E GPRFTL+L
Sbjct: 314 HNQRDYIFFRHHRYEFKKEGTKAA-----------------------LLELGPRFTLRLK 350
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFD K GEFEWV K EM+TSRRRFFL
Sbjct: 351 WLQKGTFDAKWGEFEWVLKRHEMETSRRRFFL 382
>gi|312080220|ref|XP_003142507.1| brix domain-containing protein [Loa loa]
gi|307762330|gb|EFO21564.1| brix domain-containing protein [Loa loa]
gi|393911355|gb|EJD76271.1| brix domain-containing protein, variant [Loa loa]
Length = 334
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 165/271 (60%), Gaps = 24/271 (8%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIE+TRE D T+ DD E+ DE ++ G PKILITT + F
Sbjct: 87 PRTIESTREHDVTMIEDDDQEVQHDEANDEMNAYFSNGILPKILITTSPYAKVNTFKFCY 146
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL IPNS + R LK++++ AK K++T +IVVH +R+ P+ +++ LPDGPTA F
Sbjct: 147 ELQKCIPNSDIFTRKGIPLKRVVKQAKSKEYTDLIVVHEDRKIPNGIVLCHLPDGPTAFF 206
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K++ L K++K G T H PELVLNNF TRLGH + R+ LFPQ + GRRVVTFH
Sbjct: 207 KINSLTFTKNLKKKGESTIHYPELVLNNFNTRLGHTIARMFACLFPQKAMYTGRRVVTFH 266
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IFFRHHRY F+ + K + L E GPRFTL+L
Sbjct: 267 NQRDYIFFRHHRYEFKKEGEKAA-----------------------LLELGPRFTLRLKW 303
Query: 243 LQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFDT+ GE+EWV K EM++SRRRFFL
Sbjct: 304 LQKGTFDTRYGEYEWVLKRHEMESSRRRFFL 334
>gi|167534722|ref|XP_001749036.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772460|gb|EDQ86111.1| predicted protein [Monosiga brevicollis MX1]
Length = 239
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 167/263 (63%), Gaps = 25/263 (9%)
Query: 10 REPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIP 69
RE D+T+ P+DDE+ DE +S G PK+LITT F L ++IP
Sbjct: 2 REKDDTIVDPEDDEVMQDQATDELASYF-DGKEPKVLITTSNKACGDAYQFGEILANMIP 60
Query: 70 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 129
++ ++KR ++LK II+ A K FT ++V++ ++++ + L++ LPDGPTAHFK++ +
Sbjct: 61 SAQFFKRKGFELKTIIKQAIAKGFTDVMVINEDKKKVNGLVVSHLPDGPTAHFKVTNIKY 120
Query: 130 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 189
K+I NHG T H PE+++NNF TRLGH+VGR + +LFPQ PEF GR VVTFHNQRDFIF
Sbjct: 121 AKEIHNHGASTMHYPEVIINNFHTRLGHQVGRQLTALFPQVPEFEGRAVVTFHNQRDFIF 180
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
R HRYIF KE G LQE GPRFTLKL SLQ GTFD
Sbjct: 181 VRRHRYIFRNKERVG------------------------LQELGPRFTLKLRSLQKGTFD 216
Query: 250 TKGGEFEWVHKPEMDTSRRRFFL 272
TK GE+E+V++ E+ T RR+FFL
Sbjct: 217 TKFGEYEFVYRSELGTGRRKFFL 239
>gi|268532524|ref|XP_002631390.1| Hypothetical protein CBG03232 [Caenorhabditis briggsae]
Length = 385
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 165/272 (60%), Gaps = 24/272 (8%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE+ RE D T+ DDE+ DEF+ + PK++IT F
Sbjct: 137 VPKTIESMREYDATMVDEQDDEVEHDEANDEFAPYFNRETTPKVMITMTPKAKITTFKFC 196
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL IPNS + R LK IIE AK+++FT ++VVH +R++P+ ++ LP+GPTA+
Sbjct: 197 FELQKCIPNSEIFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGPTAY 256
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FK++ L +D+K G T H PE++LNNF TRLGH + R++ LFP P+F GRRVVTF
Sbjct: 257 FKINSLTFTQDLKKFGESTAHFPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRVVTF 316
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFRHHRY F+ + +K + L E GPRFTL+L
Sbjct: 317 HNQRDYIFFRHHRYEFKKEGTKAA-----------------------LLELGPRFTLRLK 353
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFD K GEFEWV K EM+TSRRRFFL
Sbjct: 354 WLQKGTFDAKWGEFEWVLKRHEMETSRRRFFL 385
>gi|149597592|ref|XP_001520910.1| PREDICTED: ribosome production factor 1-like, partial
[Ornithorhynchus anatinus]
Length = 227
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/245 (51%), Positives = 163/245 (66%), Gaps = 26/245 (10%)
Query: 30 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DEF+S + +PKILITT R F +L +VIPNSH Y R LKKII
Sbjct: 7 TDEFASYFNRQTSPKILITTSDRPRGRTVRFCEQLSTVIPNSHVYYRRGLALKKIIPQCV 66
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN-PTGHIPELVL 148
+DFT ++V++ +R+ P+ L++ LP+GPTAHF++S + LRK+IK G PT H+PE++L
Sbjct: 67 ARDFTDLMVINEDRKVPNGLVLSHLPNGPTAHFRMSSVRLRKEIKRKGKAPTEHLPEVIL 126
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NNF TRLGH +GR++ SLFP P+F GR+V TFHNQRD+IFFR HRYIF++++ G
Sbjct: 127 NNFTTRLGHSIGRMLASLFPHDPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVG---- 182
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSR 267
+QE GPRFTLKL SLQ GTFD+K GE+EWVHKP EMDTSR
Sbjct: 183 --------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSR 222
Query: 268 RRFFL 272
R+F L
Sbjct: 223 RKFHL 227
>gi|402594394|gb|EJW88320.1| brix domain-containing protein [Wuchereria bancrofti]
Length = 334
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/271 (47%), Positives = 165/271 (60%), Gaps = 24/271 (8%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIE+TRE D T+ DD E+ DE S+ PKILITT + F
Sbjct: 87 PRTIESTREFDITLVEDDDQEVQHDEANDEMSAYFNDEIPPKILITTSPYAKVNTFKFCY 146
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL IPN+ + R LKK+++ AK K++T +IVVH +R+ P+ +++ LPDGPTA F
Sbjct: 147 ELQKCIPNADIFTRKGIPLKKVVKQAKSKEYTDLIVVHEDRKIPNGIVLCHLPDGPTAFF 206
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K++ L K++K G T H PE+VLNNF TRLGH + R+ LFPQ P + GRRVVTFH
Sbjct: 207 KINSLTFTKNLKKKGESTVHYPEIVLNNFNTRLGHTIARMFACLFPQKPMYSGRRVVTFH 266
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IFFRHHRY F+ + K + L E GPRFTL+L
Sbjct: 267 NQRDYIFFRHHRYEFKREGEKAA-----------------------LLELGPRFTLRLKW 303
Query: 243 LQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFD++ GE+EWV K EM++SRRRFFL
Sbjct: 304 LQKGTFDSRYGEYEWVLKRHEMESSRRRFFL 334
>gi|238231629|ref|NP_001154000.1| ribosome production factor 1 [Oncorhynchus mykiss]
gi|225703316|gb|ACO07504.1| Ribosome production factor 1 [Oncorhynchus mykiss]
Length = 354
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 170/271 (62%), Gaps = 26/271 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEFS+ + PK+LITT R F
Sbjct: 106 VPKTIENQRVYDETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFC 165
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
++L +VIP++H Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAH
Sbjct: 166 NQLATVIPDAHVYYRRGLALKKVIPQCIARGFTYLMVINEDRKVPNGMVLCHLPDGPTAH 225
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G +PT H PE++LNNF TRLGH +GRL +LFP P+F GR+V T
Sbjct: 226 FKVSSVRLRKEMKRRGKDPTEHSPEVILNNFTTRLGHSMGRLFAALFPHDPQFVGRQVAT 285
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 286 FHNQRDFIFFRFHRYIFKNEQRVG------------------------IQELGPRFTLKL 321
Query: 241 VSLQHGTFDTKGGEFEWVHK-PEMDTSRRRF 270
SLQ GTFD+K GE+EWV K E D RRRF
Sbjct: 322 RSLQKGTFDSKFGEYEWVLKRHENDVCRRRF 352
>gi|213511502|ref|NP_001134288.1| ribosome production factor 1 [Salmo salar]
gi|209732114|gb|ACI66926.1| Ribosome production factor 1 [Salmo salar]
Length = 354
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 171/273 (62%), Gaps = 26/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEFS+ + PK+LITT R F
Sbjct: 106 VPKTIENQRVYDETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFC 165
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
++L +VIP++H Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAH
Sbjct: 166 NQLATVIPDAHVYYRRGLALKKVIPQCIARGFTYLMVINEDRKVPNGMVLCHLPDGPTAH 225
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + LRK++K G +PT H PE++LNNF TRLGH +GRL +LFP P+F GR+V T
Sbjct: 226 FKVSSVRLRKEMKRRGKDPTEHSPEVILNNFTTRLGHSMGRLFAALFPHDPQFVGRQVAT 285
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRDFIFFR HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 286 FHNQRDFIFFRFHRYIFKNEKRVG------------------------IQELGPRFTLKL 321
Query: 241 VSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SLQ GTFD+K GE+EWV K E D RRRF L
Sbjct: 322 RSLQKGTFDSKFGEYEWVLKRHENDVCRRRFNL 354
>gi|341885995|gb|EGT41930.1| hypothetical protein CAEBREN_31495 [Caenorhabditis brenneri]
Length = 382
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/272 (45%), Positives = 166/272 (61%), Gaps = 24/272 (8%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE+ RE D T+ DDE+ DEF+ + +PK++IT F
Sbjct: 134 VPKTIESMREYDPTMVDEQDDEVEHDEANDEFAPYFNRETSPKVMITMTPKAKITTFKFC 193
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL IPN+ + R LK IIE AK+++FT ++VVH +R++P+ ++ LP+GPTA+
Sbjct: 194 YELQKCIPNAEIFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGPTAY 253
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FK++ L +D+K G T H PE++LNNF TRLGH + R++ LFP P+F GRRVVTF
Sbjct: 254 FKINSLTFTQDLKKFGEATSHHPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRVVTF 313
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFRHHRY F+ + +K + L E GPRFTL+L
Sbjct: 314 HNQRDYIFFRHHRYEFKKEGTKAA-----------------------LLELGPRFTLRLK 350
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFD K GEFEWV K EM+TSRRRFFL
Sbjct: 351 WLQKGTFDAKWGEFEWVLKRHEMETSRRRFFL 382
>gi|349802317|gb|AEQ16631.1| putative ribosome production factor 1 [Pipa carvalhoi]
Length = 297
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 170/273 (62%), Gaps = 27/273 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P D+E+ DEF+S + PKILITT R F
Sbjct: 50 VPKTIENQRVYDETTVDPADEEVAYDEATDEFASYFNKQSTPKILITTSDRPRGRCVRFT 109
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L ++IPNS Y R LKKII +DFT +IV++ +R+ P+ L++ LPDGPTAH
Sbjct: 110 EQLCTIIPNSQVYYRRGLALKKIIPQCLARDFTDLIVINEDRKVPNGLVLCHLPDGPTAH 169
Query: 122 FKLSKLVL-RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FK+S + L + K PT H PE++LNNF TRLGH +GR+ SL+P P+FRGR+V T
Sbjct: 170 FKISNVRLRKGKKKERKEPTEHKPEIILNNFTTRLGHTIGRMFASLYPHDPQFRGRQVAT 229
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR+HRYIF+ ++ G +QE GPRFTLKL
Sbjct: 230 FHNQRDYIFFRYHRYIFKGEKKVG------------------------IQELGPRFTLKL 265
Query: 241 VSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
SL+ GTFD+K GE+EWVHK EMD++RR+F L
Sbjct: 266 RSLK-GTFDSKYGEYEWVHKRHEMDSNRRKFNL 297
>gi|209878848|ref|XP_002140865.1| ribosome production factor 2 [Cryptosporidium muris RN66]
gi|209556471|gb|EEA06516.1| ribosome production factor 2, putative [Cryptosporidium muris RN66]
Length = 340
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 175/277 (63%), Gaps = 27/277 (9%)
Query: 3 PRTIENTREPDETVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIENTRE DET + +D EL+ + DEFS + +P +LITTCR S F
Sbjct: 84 PRTIENTREIDETYLKDAINDQELYKEMENDEFSDYFLKKRSPHLLITTCRKPSKHMYNF 143
Query: 61 ISELLSVIPNSHYYKRGTYDLKKII-EYAKKKDFTS----IIVVHTNRREPDALLIIGLP 115
+ E +++IPN +YKR + +K II E KD T I + H +++P L I LP
Sbjct: 144 LKEFVAIIPNCDFYKRYNFKIKSIIKEINSNKDNTYTDLLIFIEHPVKKQPWGLYICHLP 203
Query: 116 DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
+GPT++F++ L L +D+K T H PE++LNNF TR+G+R+GR + SLFP +P+F G
Sbjct: 204 NGPTSYFRMRSLKLAQDMKGTAVSTTHNPEIILNNFDTRMGYRIGRQLASLFPFNPDFNG 263
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
RRV+TFHNQRDFIFFRH+RYIF+ K++K + T LQE GPR
Sbjct: 264 RRVITFHNQRDFIFFRHYRYIFKQKDNKVTS--------------------TGLQEIGPR 303
Query: 236 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
FTLKL+ LQ GTF+TK G FE++ +P++ +R+ FF+
Sbjct: 304 FTLKLMWLQEGTFNTKQGNFEYIWRPDLQVNRKIFFI 340
>gi|225711246|gb|ACO11469.1| Ribosome production factor 1 [Caligus rogercresseyi]
Length = 394
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 175/298 (58%), Gaps = 50/298 (16%)
Query: 1 MTPRTIENTREPDETVCR--------------------PDDDELFAGNDA--DEFSSILK 38
+ PRTIENTRE DET + P ++ + D DEF S
Sbjct: 121 LVPRTIENTREADETTVKDVAPSANEDDEEAGGEEKEPPQEESIEDQWDILNDEFKSYFD 180
Query: 39 QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
+ PK++IT+ +R F+ EL +IPN+ + R +KKIIE ++++T +++
Sbjct: 181 KSYVPKVIITSGDNPHSRSITFMKELSRMIPNAELFWRNKSSIKKIIEGGVEREYTDVVI 240
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGH 157
V+ N R+P+ ++I LPDGPTAHFK+S + ++K N N T H PE++LNNF TRLGH
Sbjct: 241 VNENNRKPNGIVISHLPDGPTAHFKISNVKTTPEMKKNWRNITVHRPEVILNNFTTRLGH 300
Query: 158 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKS 217
+GR++ SLF PEFRG+R VTFHNQRD+IFFRHHRY F+ E
Sbjct: 301 SIGRMLASLFHYEPEFRGQRAVTFHNQRDYIFFRHHRYEFKNTEK--------------- 345
Query: 218 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
+L+E GPRFTLKL SLQ GTFD+K GE+EW+ + EM+TSRRRFFL
Sbjct: 346 ---------VKLKELGPRFTLKLRSLQKGTFDSKLGEYEWIITGRRHEMETSRRRFFL 394
>gi|301102011|ref|XP_002900093.1| ribosome production factor 1, putative [Phytophthora infestans
T30-4]
gi|262102245|gb|EEY60297.1| ribosome production factor 1, putative [Phytophthora infestans
T30-4]
Length = 354
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 160/252 (63%), Gaps = 25/252 (9%)
Query: 1 MTPRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA 59
M PRTI+NTRE + T V D+E+ A DEF+SI APK++ITT F S
Sbjct: 76 MEPRTIDNTREKEVTMVSNEGDEEIEADERDDEFASIFANEEAPKLMITTRPFPSGELYH 135
Query: 60 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
FI +L+ ++PNS YYKRGT+D+K+I+++A K FT +IV+ + + +L+ LP+GPT
Sbjct: 136 FIKDLMDLLPNSFYYKRGTFDIKEIVQFASNKKFTHLIVLSEKSKICNGMLVSRLPEGPT 195
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
A FK+S + L IK G T H PEL+LNNF+TRLGHRVGR + SLF PEF G +VV
Sbjct: 196 AFFKVSNVKLTASIKERGRRTNHQPELILNNFSTRLGHRVGRFLGSLFEHQPEFEGHQVV 255
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRDFIF RHHRY FE N KKA RLQE GPRFT+K
Sbjct: 256 TFHNQRDFIFVRHHRYTFE---------NEKKA---------------RLQEIGPRFTMK 291
Query: 240 LVSLQHGTFDTK 251
L LQ GTFDTK
Sbjct: 292 LRWLQQGTFDTK 303
>gi|318087204|gb|ADV40194.1| ribosome production factor 1 [Latrodectus hesperus]
Length = 305
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 166/272 (61%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T+ENTREPDET+ PDD E+ DEFSS + PK+ IT F
Sbjct: 58 VPKTLENTREPDETMVNPDDQEVQIDQSMDEFSSYYDKKEPPKVFITCSENPHTWTIRFC 117
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL +I +S + R LKK++E AK + FT+I+VV +RR P +++I LP GPTA
Sbjct: 118 RELKLLIEDSIFRYRRRTSLKKLVEEAKSRGFTNIVVVTEDRRHPTGMVVIHLPAGPTAF 177
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F++S + K+IKN T H PE+V+NNF TRLG +GRL SLF +P+F GRRVVTF
Sbjct: 178 FRISSVKYIKNIKNRAECTSHKPEIVMNNFRTRLGLSIGRLFTSLFQYNPDFHGRRVVTF 237
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IF RHHRY F+ +AK A LQE GPRFTL+L
Sbjct: 238 HNQRDYIFVRHHRYEFKN-----------EAKVA-------------LQEIGPRFTLRLR 273
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
SLQ TFDT GE+EW+ K EM+TSRRRFFL
Sbjct: 274 SLQKNTFDTMFGEYEWILKRHEMETSRRRFFL 305
>gi|332026181|gb|EGI66323.1| Putative ribosome production factor 1 [Acromyrmex echinatior]
Length = 339
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 178/280 (63%), Gaps = 32/280 (11%)
Query: 2 TPRTIENTREPDET--VCRPDDD---ELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 56
P T+E+ RE DET V DD+ EL + DEF++ +Q PK+LIT + +
Sbjct: 83 VPHTLESLREKDETMIVGNLDDEANEELKFDCEHDEFAAYYRQEYEPKVLITYADNPNRK 142
Query: 57 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F EL +IPNS R +KK+++ A ++FT II+V+ N+ +P+ +LII LPD
Sbjct: 143 TRIFGRELTRMIPNSISLYRNRSGVKKMVKSATARNFTDIIIVNENQCKPNGMLIIHLPD 202
Query: 117 GPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
GPTAHFKLS + L D+K NH T H PE++LNNF TRLG +GR++ +LF PEF+G
Sbjct: 203 GPTAHFKLSNVKLTTDLKRNHKEITEHRPEVILNNFTTRLGFTIGRMLGALFHYQPEFKG 262
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
RRVVTFHNQRD+IFFRHHRY F+ K NGK RL+E GPR
Sbjct: 263 RRVVTFHNQRDYIFFRHHRYEFDLK-------NGK----------------PRLRELGPR 299
Query: 236 FTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
FTLKL SLQHGTFD+K G++EW+ + EM+TSRR+FFL
Sbjct: 300 FTLKLRSLQHGTFDSKYGDYEWIIQGRRHEMETSRRKFFL 339
>gi|17534031|ref|NP_495918.1| Protein F44G4.1 [Caenorhabditis elegans]
gi|27924007|sp|P54073.4|YUY1_CAEEL RecName: Full=Brix domain-containing protein F44G4.1
gi|14787708|emb|CAA90124.4| Protein F44G4.1 [Caenorhabditis elegans]
Length = 384
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 127/272 (46%), Positives = 167/272 (61%), Gaps = 24/272 (8%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE+ RE D T+ +DDE+ DEF+ + +PK++IT F
Sbjct: 136 VPKTIESMREYDATMVNEEDDEVEHDEANDEFAPYFNRETSPKVMITMTPKAKITTFKFC 195
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL IPNS + R LK IIE AK+++FT ++VVH +R++P+ ++ LP+GPTA+
Sbjct: 196 FELQKCIPNSEIFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGPTAY 255
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FK++ L +D+K G T H PE++LNNF TRLGH + R++ LFP P+F GRRVVTF
Sbjct: 256 FKINSLTFTQDLKKFGESTSHFPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRVVTF 315
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFRHHRY F+ + SK + L E GPRFTL+L
Sbjct: 316 HNQRDYIFFRHHRYEFKKEGSKAA-----------------------LLELGPRFTLRLK 352
Query: 242 SLQHGTFDTKGGEFEWVHKP-EMDTSRRRFFL 272
LQ GTFD K GEFEWV K EM+TSRRRFFL
Sbjct: 353 WLQKGTFDAKWGEFEWVLKRHEMETSRRRFFL 384
>gi|340710749|ref|XP_003393948.1| PREDICTED: probable ribosome production factor 1-like [Bombus
terrestris]
Length = 337
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 175/280 (62%), Gaps = 32/280 (11%)
Query: 2 TPRTIENTREPDETVCRPDDD-----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 56
P T+E+ RE DET+ D D EL + DEF+ K PK+LI+ C + +
Sbjct: 81 VPHTLESLREKDETIVSGDLDDEENAELKVDFEHDEFAPFYKHAYEPKVLISFCDNPTRK 140
Query: 57 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F EL +IPNS R +KK+++ A K+FT I++V+ ++ +P+ LL+I LPD
Sbjct: 141 TRIFGRELTRIIPNSISLYRNRSGVKKMVKSAIAKNFTDIVIVNEDQCKPNGLLVIHLPD 200
Query: 117 GPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
GPTAHFKLS + L D+K +H + H PE++LNNF TRLG +GR++ +LF PEF+G
Sbjct: 201 GPTAHFKLSNVKLTVDLKRSHKEISEHRPEVILNNFTTRLGCTIGRMLGALFHYEPEFKG 260
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
RRVVTFHNQRD+IFFRHHRY F+ + +K RL+E GPR
Sbjct: 261 RRVVTFHNQRDYIFFRHHRYQFDMERNK-----------------------PRLRELGPR 297
Query: 236 FTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
FTLKL SLQHGTFD+K GE+EW+ + +M+TSRR+FFL
Sbjct: 298 FTLKLQSLQHGTFDSKYGEYEWIIQGKRHDMETSRRKFFL 337
>gi|223994087|ref|XP_002286727.1| hypothetical protein THAPSDRAFT_31465 [Thalassiosira pseudonana
CCMP1335]
gi|220978042|gb|EED96368.1| hypothetical protein THAPSDRAFT_31465 [Thalassiosira pseudonana
CCMP1335]
Length = 299
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 167/280 (59%), Gaps = 26/280 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
TPRT++NTRE + T +PDD+E+ A DEF+ PKIL+TT S FI
Sbjct: 37 TPRTLDNTRESEVTTVQPDDEEIIADEAEDEFAPYFSDEIRPKILLTTRPCPSGELFHFI 96
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLP------ 115
S+L+ P +YY R +Y +K+I + + FT +IV+ + + +LI L
Sbjct: 97 SDLMRFFPQLYYYPRKSYSVKEICTFGSNRKFTHLIVLSEKSKVCNGMLISHLRPSTAAN 156
Query: 116 --DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 173
GPTA FK+S ++ D+ N+G+ T H+PELVLN F TRLGHR GR + SLFP + +F
Sbjct: 157 GLGGPTAFFKVSNVIPSSDVPNNGSATNHVPELVLNGFTTRLGHRAGRFLGSLFPHNAQF 216
Query: 174 RGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 233
+GR+V TFHNQRDFIF RHHRY E GKK A RLQE G
Sbjct: 217 QGRQVATFHNQRDFIFVRHHRY-----EMICCLETGKKKTKA------------RLQELG 259
Query: 234 PRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
PRFT+K+ LQ GTFDT+ GE+EW HK EMDT+RR+F L
Sbjct: 260 PRFTMKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 299
>gi|350406160|ref|XP_003487677.1| PREDICTED: probable ribosome production factor 1-like [Bombus
impatiens]
Length = 339
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 174/280 (62%), Gaps = 32/280 (11%)
Query: 2 TPRTIENTREPDETVCRPDDD-----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 56
P T+E+ RE DET D D EL + DEF+ K PK+LI+ C + +
Sbjct: 83 VPHTLESLREKDETTVSGDIDDEENAELKVDFEHDEFAPFYKHAYEPKVLISFCDNPTRK 142
Query: 57 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F EL +IPNS R +KK+++ A K+FT I++V+ ++ +P+ LL+I LPD
Sbjct: 143 TRIFGRELTRIIPNSISLYRNRSGVKKMVKSAIAKNFTDIVIVNEDQCKPNGLLVIHLPD 202
Query: 117 GPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
GPTAHFKLS + L D+K +H + H PE++LNNF TRLG +GR++ +LF PEF+G
Sbjct: 203 GPTAHFKLSNVKLTVDLKRSHKEISEHRPEVILNNFTTRLGCTIGRMLGALFHYEPEFKG 262
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
RRVVTFHNQRD+IFFRHHRY F+ + +K RL+E GPR
Sbjct: 263 RRVVTFHNQRDYIFFRHHRYQFDMERNK-----------------------PRLRELGPR 299
Query: 236 FTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
FTLKL SLQHGTFD+K GE+EW+ + +M+TSRR+FFL
Sbjct: 300 FTLKLQSLQHGTFDSKYGEYEWIIQGKRHDMETSRRKFFL 339
>gi|281206453|gb|EFA80639.1| brix domain-containing protein [Polysphondylium pallidum PN500]
Length = 311
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/270 (45%), Positives = 163/270 (60%), Gaps = 25/270 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIE+ R D+T+ +D E + DEFS +G PK ITT + F
Sbjct: 67 PRTIESMRVADDTIVDEEDPEYQDEIELDEFSKYF-EGKEPKTCITTNEKPGGKAVGFAK 125
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
++PN+ Y+ R ++L +I+++ K +D+T +IVV+ ++ E + L+I LPDGPTA F
Sbjct: 126 LFPRILPNAEYFPRQHFELSEIVKFCKNRDYTDLIVVNEDKGEVNTLMICHLPDGPTALF 185
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K++ + + I G T H EL++NNF TRLGH +GR+ SLFPQ P FRGRRV T H
Sbjct: 186 KVTSITMPDKIPGGGEMTNHKAELIVNNFTTRLGHTIGRMFASLFPQEPNFRGRRVCTLH 245
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFR HRY+FE+K S AN LQE GPRFTLKL+S
Sbjct: 246 NQRDFIFFRQHRYMFESK----SKAN--------------------LQELGPRFTLKLMS 281
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQHGTFDTK GE+ +HK MD R++F L
Sbjct: 282 LQHGTFDTKSGEYIHLHKAGMDVDRKKFVL 311
>gi|397603955|gb|EJK58570.1| hypothetical protein THAOC_21295 [Thalassiosira oceanica]
Length = 346
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 172/279 (61%), Gaps = 22/279 (7%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRT++NTRE + T + DD+E+ A DEF+ PKIL+TT S FI+
Sbjct: 81 PRTLDNTRESEVTTVKEDDEEIIADEAEDEFAPYFSDEIRPKILLTTRPCPSAELFHFIA 140
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLP------- 115
+L+ IP +YY R +Y +K+I + + FT +IV+ + + +LI L
Sbjct: 141 DLMRFIPQMYYYPRKSYSVKEICTFGSNRRFTHVIVLSEKSKVCNGMLISHLRPSTAANG 200
Query: 116 -DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
GPTA FKLS + D+ N+G+ T H+PEL L+ F TRLGHR GR + SLFP + +F+
Sbjct: 201 LGGPTAFFKLSNYIPSTDVPNNGSATNHVPELNLHGFTTRLGHRAGRFLGSLFPHNAQFQ 260
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GR+V TFHNQRDFIF RHHRYIFE +G D S++T ++K RLQE GP
Sbjct: 261 GRQVATFHNQRDFIFVRHHRYIFE----EGKDT---------SKETKEKKTKARLQELGP 307
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
RFT+K+ LQ GTFDT+ GE+EW HK EMDT+RR+F L
Sbjct: 308 RFTIKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 346
>gi|91078792|ref|XP_969832.1| PREDICTED: similar to CG6712 CG6712-PA [Tribolium castaneum]
gi|270004111|gb|EFA00559.1| hypothetical protein TcasGA2_TC003427 [Tribolium castaneum]
Length = 331
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 173/279 (62%), Gaps = 31/279 (11%)
Query: 2 TPRTIENTREPDETVCR---PDDDELFAGN-DADEFSSILKQGCAPKILITTCRFNSNRG 57
P T+E R DET +++EL + D DEFS +Q PK+LIT +
Sbjct: 76 VPHTLETLRLKDETTVEDVNTEENELVRNDFDNDEFSEYYQQSYEPKVLITYSDNPLRKT 135
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F EL +IPNS R +KKII+ A K+++T I+V++ NR EPD LL+I LP+G
Sbjct: 136 RIFGRELTRIIPNSVSLYRNRSGVKKIIKSATKRNYTDILVINENRHEPDGLLVIHLPNG 195
Query: 118 PTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
PTAHFKLS + + ++ KNH + H PE++LNNF+TRLG +GR++ +LF PEF GR
Sbjct: 196 PTAHFKLSNVKITTELRKNHKDINDHRPEVILNNFSTRLGLTIGRMLGALFHYEPEFVGR 255
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
R VTFHNQRD+IFFRH+RY F D +GKKA RL+E GPRF
Sbjct: 256 RAVTFHNQRDYIFFRHYRYEF--------DKDGKKA---------------RLKELGPRF 292
Query: 237 TLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
TLKL SLQ GTFD+K G++EW+ + M+TSRR+FFL
Sbjct: 293 TLKLRSLQKGTFDSKYGQYEWIIEGRRHAMETSRRKFFL 331
>gi|427794089|gb|JAA62496.1| Putative ribosome bioproteinsis protein rpf1, partial
[Rhipicephalus pulchellus]
Length = 327
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 174/309 (56%), Gaps = 63/309 (20%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIENTREPD+T+ + DD+E+ DE ++ ++ PK+LITT R F
Sbjct: 43 PRTIENTREPDDTMVQADDEEVQLDEAMDEMAAYFRKEYVPKLLITTSDNPHTRTIKFCR 102
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL IPN+ + R +KK +E+A ++ ++ I V++ +RR P+ LL+ LPDGPTA+F
Sbjct: 103 ELKQSIPNADFRWRNRSRIKKTVEHAIERGYSDIAVINEDRRHPNGLLLTHLPDGPTAYF 162
Query: 123 KLSKLVLRKDIKNHG-----------------NPTG---------------------HIP 144
++S + KDIK PT H P
Sbjct: 163 RISNVKFCKDIKGRAAYSAHRPEVILNXHLPDGPTAYFRISNVKFCKDIKGRAAYSAHRP 222
Query: 145 ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKG 204
E++LNNF TRLGH V R++ SLF P+F+GRRVVTFHNQRD+IFFRHHRY F
Sbjct: 223 EVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTFHNQRDYIFFRHHRYEFRN----- 277
Query: 205 SDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EM 263
+EK S +QE GPRFTL+L SLQ GTFD+K GE+EWV K EM
Sbjct: 278 ------------AEKVS-------IQEIGPRFTLRLKSLQKGTFDSKFGEYEWVLKRHEM 318
Query: 264 DTSRRRFFL 272
+TSRRRFFL
Sbjct: 319 ETSRRRFFL 327
>gi|321459152|gb|EFX70209.1| hypothetical protein DAPPUDRAFT_228440 [Daphnia pulex]
Length = 336
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 168/277 (60%), Gaps = 30/277 (10%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PRTIENTRE D T +D+E+ DE+ + + PKILIT+ ++ FI
Sbjct: 84 VPRTIENTREADVTTVDQEDEEVTFDITHDEYEAYFSKTYEPKILITSSDNPHSKTIHFI 143
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL + P S R +KK+IE AK+KD+T ++V++ +RR P+ +L+ LPDGPTA+
Sbjct: 144 RELTKIFPKSECQWRKRSSVKKMIESAKEKDYTDVVVINEDRRVPNGMLVSHLPDGPTAY 203
Query: 122 FKLSKLVLRKDIKNHG---NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
FK+S + L KD+K T H PE++LNNF TRLG V R++ SLF P+F+GRR
Sbjct: 204 FKISNVKLTKDMKYKNIIKEFTTHRPEVILNNFQTRLGQAVSRMLASLFHYDPQFKGRRA 263
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
VTFHNQRD+IFFRHHRY F++++ L+E GPRFTL
Sbjct: 264 VTFHNQRDYIFFRHHRYEFKSQKRAA------------------------LRELGPRFTL 299
Query: 239 KLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
+L LQ GTFDT G++EW+ + EM+TSRRRFFL
Sbjct: 300 RLKWLQKGTFDTIEGDYEWIIAGKRHEMETSRRRFFL 336
>gi|307184489|gb|EFN70879.1| Probable ribosome production factor 1 [Camponotus floridanus]
Length = 345
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/281 (45%), Positives = 173/281 (61%), Gaps = 33/281 (11%)
Query: 2 TPRTIENTREPDETVCRPDD------DELFAGNDADEFSSILKQGCAPKILITTCRFNSN 55
P TIE+ RE DET+ +D EL + DEF++ +Q PK+LIT +
Sbjct: 88 VPHTIESLREKDETMIVSNDLNDETNQELKVECEHDEFAAYYRQDYEPKVLITYADNPNR 147
Query: 56 RGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLP 115
+ F EL +IPNS R +KK+++ A K+FT I++V+ ++ +P+ +LII LP
Sbjct: 148 KTRIFGRELTRIIPNSLSLYRNRSGVKKMVKSAVAKNFTDIVIVNEDQCKPNGMLIIHLP 207
Query: 116 DGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
DGPTAHFKLS + + ++K NH T H PE++LNNF+TRLG + R++ +LF PEF+
Sbjct: 208 DGPTAHFKLSNVKITTELKRNHKEITEHRPEVILNNFSTRLGFTIARMLGALFHYQPEFK 267
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GRR VTFHNQRD+IFFRHHRY F K K RL+E GP
Sbjct: 268 GRRAVTFHNQRDYIFFRHHRYEFNLKTGK-----------------------PRLRELGP 304
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
RFTLKL SLQHGTFD+K G++EW+ + +M+TSRR+FFL
Sbjct: 305 RFTLKLRSLQHGTFDSKYGDYEWIIQGRRHDMETSRRKFFL 345
>gi|281344700|gb|EFB20284.1| hypothetical protein PANDA_022116 [Ailuropoda melanoleuca]
Length = 215
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/232 (51%), Positives = 151/232 (65%), Gaps = 25/232 (10%)
Query: 30 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DEF+S + +PKILITT R +L +VIPNSH Y R LKKII
Sbjct: 8 TDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCT 67
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-NPTGHIPELVL 148
+DFT +IV++ +R+ P+ L++ LP+GPTAHFK+S + LRK+IK G +PT HIPE++L
Sbjct: 68 SRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHIPEIIL 127
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NNF TRLGH VGR+ SLFP +P+F GR+V TFHNQRD+IFFR HRYIF +++ G
Sbjct: 128 NNFTTRLGHSVGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFRSEKKVG---- 183
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 260
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK
Sbjct: 184 --------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHK 215
>gi|255070057|ref|XP_002507110.1| ribosome biogenesis protein RPF1 [Micromonas sp. RCC299]
gi|226522385|gb|ACO68368.1| ribosome biogenesis protein RPF1 [Micromonas sp. RCC299]
Length = 398
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 184/315 (58%), Gaps = 44/315 (13%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET + D+E+ DEF+ + K++ITT R S F+
Sbjct: 84 VPKTIENQRVRDETHVKDIDEEVVEELAHDEFAKHFSDVTSQKVMITTSRKPSGEMFRFL 143
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR-----EPDALLIIGLPD 116
+ SV+PN +Y+ R Y ++++I++A + FT ++V + NR+ + + LL + LP
Sbjct: 144 ENIFSVVPNVYYHARRAYHVQEVIKHAVARGFTDLLVFNENRKFGRGAKVNGLLHVHLPV 203
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GP+ ++LS L L K I+NHG T H PEL+LNNF+TRLGHR+GR++ S+FPQ PE +GR
Sbjct: 204 GPSCLYRLSSLALTKTIRNHGRATKHHPELILNNFSTRLGHRIGRMLMSVFPQRPELQGR 263
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKE-------------------SKGSD---------AN 208
RVVTFHNQRDFIFFRHHRYIFE ++ ++GS A
Sbjct: 264 RVVTFHNQRDFIFFRHHRYIFELRKGIRQYDQRESDNSTKSVEYAQGSPEGRKPIEAVAR 323
Query: 209 GKKAKDAKSEKTSQQKVIT--------RLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 260
+ +DA TS + + RLQE GPRFTLKL+S+Q G FD+K GE+E+V
Sbjct: 324 NPEIQDAPERITSGRSSCSGDGSNFRARLQELGPRFTLKLLSVQKGVFDSKHGEYEYVRC 383
Query: 261 PEMDTS---RRRFFL 272
D + RR+F L
Sbjct: 384 RRADGNKLDRRKFVL 398
>gi|225719340|gb|ACO15516.1| Ribosome production factor 1 [Caligus clemensi]
Length = 370
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 174/310 (56%), Gaps = 64/310 (20%)
Query: 3 PRTIENTREPDETVCRP----------DDDELFAGNDA---------------------- 30
PRTIENTRE DET + D+DE +
Sbjct: 85 PRTIENTREEDETTVKELPTPSEGKEEDNDEEMPEKEEPSDEPSEEPSEEPSEETIEDQW 144
Query: 31 ----DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 86
DEF S + PK+LIT+ +R F+ EL +IP++ + R +KKIIE
Sbjct: 145 DILNDEFKSYFDKSYVPKVLITSGDNPHSRSITFMKELSRMIPHAELFWRNKSSIKKIIE 204
Query: 87 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPE 145
++++T +++V+ N R+P+ +++ LPDGPTAHFK+S + ++K N N T H PE
Sbjct: 205 GGVEREYTDVVIVNENNRKPNGIVVSHLPDGPTAHFKMSNVKTTPEMKKNWRNITHHRPE 264
Query: 146 LVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
++LNNF TRLGH VGR++ SLF PEFRG+R VTFHNQRD+IFFRHHRY F+ E
Sbjct: 265 VILNNFTTRLGHSVGRMLASLFHYEPEFRGQRAVTFHNQRDYIFFRHHRYEFKNSEK--- 321
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV---HKPE 262
+L+E GPRFTL+L SLQ GTFD+K GE+EW+ + E
Sbjct: 322 ---------------------VKLKELGPRFTLELRSLQKGTFDSKLGEYEWIITGRRHE 360
Query: 263 MDTSRRRFFL 272
M+TSRRRFFL
Sbjct: 361 METSRRRFFL 370
>gi|324516931|gb|ADY46675.1| Brix domain-containing protein [Ascaris suum]
Length = 235
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 154/254 (60%), Gaps = 24/254 (9%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
DD+E+ DE SS + PK+LITT + F E+ IPN+ + R
Sbjct: 5 DDEEVLHDEANDEMSSYFNREIKPKVLITTSPYAKVNTFKFCYEMQKCIPNAEVFTRKGI 64
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 139
LKK+++ AK+ ++T +IVVH +R+ P+ +++ LPDGPTA FK++ L KDIK G
Sbjct: 65 ALKKVVKQAKQNEYTDLIVVHEDRKMPNGIVLCHLPDGPTAFFKINSLKFTKDIKRKGET 124
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFET 199
T H PE++LNNF TRLGH V R+ LFP P F GRRVVTFHNQRD+IFFRHHRY F+
Sbjct: 125 TSHNPEVILNNFNTRLGHTVARMFACLFPFEPMFTGRRVVTFHNQRDYIFFRHHRYEFKR 184
Query: 200 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 259
+ K + L E GPRFTL+L LQ GTFDT+ GE+EWV
Sbjct: 185 EGEKAA-----------------------LLELGPRFTLRLKWLQKGTFDTRCGEYEWVL 221
Query: 260 K-PEMDTSRRRFFL 272
K EM+TSRRRFFL
Sbjct: 222 KRHEMETSRRRFFL 235
>gi|432853587|ref|XP_004067781.1| PREDICTED: ribosome production factor 1-like [Oryzias latipes]
Length = 346
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 161/256 (62%), Gaps = 27/256 (10%)
Query: 20 DDDELFAGNDA-DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 78
+ DE A ++ DEFS+ + P++LITT + F +L SVIPN+H Y R
Sbjct: 115 EKDEXIAFDEGTDEFSAYFNRLTNPQVLITTSDRPRGKTVRFCEQLASVIPNAHVYYRRG 174
Query: 79 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG- 137
LKKII ++FT ++VV+ +R P+ L++ LPDGPTAHFK+S + LRK+IK G
Sbjct: 175 LALKKIIPQCVARNFTYLMVVNEDRLVPNGLVLCHLPDGPTAHFKVSSVRLRKEIKRRGK 234
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
+PT H PE++LNNF+TRLGH + RL +LFPQ P F GR+V TFHNQRDFIFFR HRYIF
Sbjct: 235 DPTEHSPEVILNNFSTRLGHTIARLFAALFPQDPNFVGRQVATFHNQRDFIFFRFHRYIF 294
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
+ ++ G +QE GPRFTLKL SLQ GTFD+K GE+EW
Sbjct: 295 KNEKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEW 330
Query: 258 VHKP-EMDTSRRRFFL 272
V K EMD RR+F L
Sbjct: 331 VLKRHEMDACRRKFQL 346
>gi|326429539|gb|EGD75109.1| ribosome production factor 1 [Salpingoeca sp. ATCC 50818]
Length = 444
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 162/271 (59%), Gaps = 26/271 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNS-NRGPAFI 61
P+TIE+ R D T DD+E+ +DEF+S G K+L+T R F+
Sbjct: 199 PKTIESMRVSDGTEIAADDEEVLGDERSDEFASYF-LGKTSKVLVTLSTNRPFQRTLKFV 257
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL+++IP++ Y KR + LK I+E A + +T++IVV+ N R ++L++ LP GPTAH
Sbjct: 258 EELINIIPSATYRKRNGFPLKTIVEQASARGYTALIVVNQNMRRAESLVMSHLPSGPTAH 317
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FKLS +V KDI TGH PE++ NF TRLG +V R+ QSLFPQ PEF GR VVTF
Sbjct: 318 FKLSSVVWPKDIHGTAKDTGHFPEVLTTNFNTRLGKQVSRMFQSLFPQHPEFTGRSVVTF 377
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
H QRDFIFFR HRYIF + G LQE GP+FTLKL
Sbjct: 378 HCQRDFIFFRRHRYIFRDTKRVG------------------------LQEIGPQFTLKLQ 413
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ GTFDTK G++E+V K +M R++ +L
Sbjct: 414 SLQRGTFDTKYGDYEFVAKADMYVDRKKMYL 444
>gi|66356414|ref|XP_625385.1| IMP4-like U3 small nucleolar ribonucleoprotein (snoRNP)
[Cryptosporidium parvum Iowa II]
gi|46226379|gb|EAK87384.1| IMP4-like U3 small nucleolar ribonucleoprotein (snoRNP)
[Cryptosporidium parvum Iowa II]
gi|323508781|dbj|BAJ77284.1| cgd2_160 [Cryptosporidium parvum]
Length = 359
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/278 (43%), Positives = 175/278 (62%), Gaps = 16/278 (5%)
Query: 3 PRTIENTREPDETVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIENTRE DET +D EL + DEFS + +PK+LITT S F
Sbjct: 90 PRTIENTREIDETFVHDPLNDKELHKEMENDEFSDYFSRKRSPKLLITTNNKASKHMYNF 149
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKK----DFTSIIVV--HTNRREPDALLIIGL 114
+ E++S+IPN +YKR +++K II+ +K ++T I++ H ++ P L I L
Sbjct: 150 LKEIVSIIPNCDFYKRNGFNIKDIIKEVNEKGTENNYTDILIFTEHPIKKIPWGLYICHL 209
Query: 115 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
P GPT++F++ + L +D+K T H PE++LNNF TR+G+R+GR + SLFP +P+F
Sbjct: 210 PIGPTSYFRIRSVKLAQDMKGSAFSTTHNPEVILNNFDTRIGYRIGRQLASLFPFNPDFA 269
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GRRV+ FHNQRDFIFFRH+RYIF K + S N ++ +D LQE GP
Sbjct: 270 GRRVIAFHNQRDFIFFRHYRYIFRKKRT-TSTQNAEEQQDQAINSAG-------LQEIGP 321
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
RFTLKL+ +Q GTF+TK G +E++ +P++ +R+ FFL
Sbjct: 322 RFTLKLMWIQEGTFNTKKGIYEYLWRPDLQVNRKVFFL 359
>gi|401413642|ref|XP_003886268.1| hypothetical protein NCLIV_066680 [Neospora caninum Liverpool]
gi|325120688|emb|CBZ56243.1| hypothetical protein NCLIV_066680 [Neospora caninum Liverpool]
Length = 403
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 168/271 (61%), Gaps = 24/271 (8%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
TP+TIE+ R D TV D++E+ ADEF+S + PK++ITT + + +F+
Sbjct: 157 TPKTIESMRRYDPTVVEEDEEEVAGDEAADEFASYFNREVTPKLMITTNKRVTADMYSFL 216
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E+L + PN+ +YKRG Y +K I ++A K+ FT +++ P L I+ LP+GPT++
Sbjct: 217 KEVLYIFPNAFFYKRGPYHIKNICKFAIKQGFTDLLIFKEKNHRPYGLYIVHLPEGPTSY 276
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS + L +++ T H+PEL+LNNF TRLG RV R + +LFP +PEF GRRVVTF
Sbjct: 277 FRLSSVRLAQEMHGGATMTTHLPELLLNNFTTRLGRRVARQLAALFPLTPEFSGRRVVTF 336
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIFE +GKK TRLQE GPR TLKL+
Sbjct: 337 HNQRDFIFFRHHRYIFE---------DGKK---------------TRLQEIGPRLTLKLL 372
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ G FDTK G +E++ +P+M R+ +
Sbjct: 373 WMHAGLFDTKEGLYEFIWRPDMKVDRKNMLI 403
>gi|357615873|gb|EHJ69878.1| hypothetical protein KGM_01538 [Danaus plexippus]
Length = 280
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 175/279 (62%), Gaps = 31/279 (11%)
Query: 2 TPRTIENTREPDETVCRPDD----DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRG 57
P T+E+ RE DET+ D +E + DE ++ + PK+LIT +
Sbjct: 25 VPHTLESLREKDETMPANADTEEQEEAQKDMELDEMATYFENAYEPKVLITYSDNPHTKT 84
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F EL+ +IPNS R +K+I++ A ++D T +I+V+ N+++P+ L+I LP G
Sbjct: 85 RTFGRELMKIIPNSLSRYRQRSSVKRIVQSAIREDMTDVIIVNENQKQPNGFLLIHLPSG 144
Query: 118 PTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
PTAHF+LS + K++ K+H T H PE+VLNNF+TRLG VGR++ +LF P+F+GR
Sbjct: 145 PTAHFRLSSCKITKEMNKDHREITNHRPEVVLNNFSTRLGLTVGRMLGALFHFEPQFKGR 204
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
RVVTFHNQRD+IFFRHHRY F TKE GK+AK L E GPRF
Sbjct: 205 RVVTFHNQRDYIFFRHHRYEF-TKE-------GKRAK---------------LCELGPRF 241
Query: 237 TLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
TLKL+SLQ GTFD+K G++EW+ + +M+TSRRRFFL
Sbjct: 242 TLKLISLQQGTFDSKHGDYEWIIAGRRHQMETSRRRFFL 280
>gi|237836207|ref|XP_002367401.1| RNA processing factor, putative [Toxoplasma gondii ME49]
gi|211965065|gb|EEB00261.1| RNA processing factor, putative [Toxoplasma gondii ME49]
gi|221505910|gb|EEE31545.1| RNA processing factor, putative [Toxoplasma gondii VEG]
Length = 389
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 167/271 (61%), Gaps = 24/271 (8%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TIE+ R D TV D++E+ ADEF++ + PK++ITT + + +F+
Sbjct: 143 VPATIESMRRYDPTVVEEDEEEVEGDEAADEFAAYFNREVTPKLMITTNKRVTADMYSFL 202
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E+L + PN+ +YKRG Y +K I ++A K+ FT ++V P L I+ LPDGPT++
Sbjct: 203 KEVLYIFPNAFFYKRGPYQIKNICKFAVKQGFTDLLVFKEKNHRPYGLYIVHLPDGPTSY 262
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS + L ++++ T H+PEL+LNNF TRLG RV R + +LFP +PEF GRRVVTF
Sbjct: 263 FRLSSVRLAQEMQGAATMTTHLPELLLNNFTTRLGRRVARQLAALFPLTPEFSGRRVVTF 322
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIFE +GK+ TRLQE GPR TLKL+
Sbjct: 323 HNQRDFIFFRHHRYIFE---------DGKR---------------TRLQEIGPRLTLKLL 358
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ G FDT+ G +E++ +P+M R+ +
Sbjct: 359 WMHAGLFDTREGLYEFIWRPDMKVDRKNMLI 389
>gi|66808643|ref|XP_638044.1| brix domain-containing protein [Dictyostelium discoideum AX4]
gi|60466482|gb|EAL64536.1| brix domain-containing protein [Dictyostelium discoideum AX4]
Length = 317
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 163/272 (59%), Gaps = 26/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGN-DADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIE+ R DET+ ++D+ F + DEF S G PKI++TT + ++ F
Sbjct: 71 VPRTIESMRRADETIVDTENDKEFEEEINKDEFESYF-DGRVPKIVVTTNQRSTKEAVEF 129
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
++PN ++ R Y LK+I+++ +D+T IIVV+ + D L I LP+GPTA
Sbjct: 130 AQVFTKLLPNCEFFHRRKYHLKEIVQFCNNRDYTDIIVVNETKGIIDELTISHLPNGPTA 189
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F+L+ LV+ +DI G T H EL++NNF TRLGH +GR+ S+F Q P F+GRRV T
Sbjct: 190 VFRLTNLVMPEDIPGGGEMTSHKAELIVNNFTTRLGHSIGRMFASMFAQDPNFKGRRVCT 249
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRDFIFFR HRYIFE+KE DAN +QE GPRFTLKL
Sbjct: 250 LHNQRDFIFFRQHRYIFESKE----DAN--------------------VQELGPRFTLKL 285
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ G+F+T GE+ +H+ MD R++F L
Sbjct: 286 KSLQKGSFNTSTGEYIHLHQHNMDVDRKKFVL 317
>gi|221485035|gb|EEE23325.1| RNA processing factor, putative [Toxoplasma gondii GT1]
Length = 389
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 167/271 (61%), Gaps = 24/271 (8%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TIE+ R D TV D++E+ ADEF++ + PK++ITT + + +F+
Sbjct: 143 VPATIESMRRYDPTVVEEDEEEVEGDEAADEFAAYFNREVTPKLMITTNKRVTADMYSFL 202
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E+L + PN+ +YKRG Y +K I ++A K+ FT ++V P L I+ LPDGPT++
Sbjct: 203 KEVLYIFPNAFFYKRGPYQIKNICKFAVKQGFTDLLVFKEKNHRPYGLYIVHLPDGPTSY 262
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS + L ++++ T H+PEL+LNNF TRLG RV R + +LFP +PEF GRRVVTF
Sbjct: 263 FRLSSVRLAQEMQGAATMTTHLPELLLNNFTTRLGRRVARQLAALFPLTPEFSGRRVVTF 322
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIFFRHHRYIFE +GK+ TRLQE GPR TLKL+
Sbjct: 323 HNQRDFIFFRHHRYIFE---------DGKR---------------TRLQEIGPRLTLKLL 358
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ G FDT+ G +E++ +P+M R+ +
Sbjct: 359 WMHAGLFDTREGLYEFIWRPDMKVDRKNMLI 389
>gi|219119622|ref|XP_002180567.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408040|gb|EEC47975.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 290
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 166/279 (59%), Gaps = 32/279 (11%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+NTRE + T+ D E+ A DEF+ G PK+LITT S FI
Sbjct: 36 APKTIDNTRELEPTMVL-QDPEVAADEAEDEFAPYF-NGEKPKVLITTRPRPSQNLFHFI 93
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL------- 114
++L +IP H+Y R +Y +K+I +A ++FT +IV+ + + L + L
Sbjct: 94 ADLQKLIPALHFYPRKSYSVKEICSFAANREFTHLIVLSEKSKVCNGLTLSHLRMHDGVA 153
Query: 115 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
GPTA FK+S +V K I NHG T HIPEL L+ F TRLGHR+GRL+ S+FP +F+
Sbjct: 154 KAGPTAFFKVSNVVTSKKIPNHGASTSHIPELNLHGFGTRLGHRIGRLLGSVFPHDAQFQ 213
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GR+VVTFHNQRD+IF RHHRYIF E K D LQE GP
Sbjct: 214 GRQVVTFHNQRDYIFVRHHRYIFRELEGKAKD----------------------LQELGP 251
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
RFTLKL +Q GTFDT+ GE+EW+HK EMDT+RR+F L
Sbjct: 252 RFTLKLRWIQEGTFDTQFGEYEWIHKRKEMDTTRRKFHL 290
>gi|413950307|gb|AFW82956.1| hypothetical protein ZEAMMB73_160675 [Zea mays]
Length = 146
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 117/140 (83%), Gaps = 3/140 (2%)
Query: 133 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
+ NHGNPT H PELVLNNF TRLGHRVGR+IQSLFPQ P FRGRRVVTFHNQRD+IFFRH
Sbjct: 10 VHNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQDPNFRGRRVVTFHNQRDYIFFRH 69
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
HRYIFETKE K + + SEK Q+VI RLQECGPRFTLKL++LQHGTFDT+
Sbjct: 70 HRYIFETKEKKVASKEKTSGSKSGSEK---QQVICRLQECGPRFTLKLLTLQHGTFDTRS 126
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
GE+EWVHKP+MDTSRRRFFL
Sbjct: 127 GEYEWVHKPDMDTSRRRFFL 146
>gi|383850576|ref|XP_003700871.1| PREDICTED: probable ribosome production factor 1-like [Megachile
rotundata]
Length = 337
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/280 (45%), Positives = 173/280 (61%), Gaps = 32/280 (11%)
Query: 2 TPRTIENTREPDETVCRPDDD-----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 56
P TIE+ RE DET D D EL + DEF+S + PK+LIT + +
Sbjct: 81 VPHTIESLREKDETTVTGDIDDEENQELKIDFEHDEFASYYRHDYEPKVLITYADNPTRK 140
Query: 57 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F EL +IPNS R +KK+++ A K+FT IIVV+ ++ +P+ +L+I LPD
Sbjct: 141 TRIFGVELTRIIPNSISLYRNRSGVKKMVKSAIAKNFTDIIVVNEDQCKPNGMLVIHLPD 200
Query: 117 GPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
GPTA+FKLS + + ++K +H T H PE++LNNF TRLG +GR++ +LF PEF+G
Sbjct: 201 GPTAYFKLSNVKITPELKRSHKEITTHRPEVILNNFTTRLGCTIGRMLGALFHYQPEFKG 260
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
RRVVTFHNQRD+IFFRHHRY F+ ++K RL+E GPR
Sbjct: 261 RRVVTFHNQRDYIFFRHHRYQFDFNKNK-----------------------PRLRELGPR 297
Query: 236 FTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
FTL+L LQHGTFDTK G++EW+ + +M+TSRR+FFL
Sbjct: 298 FTLRLKYLQHGTFDTKYGDYEWLIQGRRHDMETSRRKFFL 337
>gi|307201740|gb|EFN81419.1| Probable ribosome production factor 1 [Harpegnathos saltator]
Length = 288
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 172/279 (61%), Gaps = 32/279 (11%)
Query: 3 PRTIENTREPDETVC-----RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRG 57
P T+E+ RE DET D+ EL DEF++ +Q PK+LIT + +
Sbjct: 33 PHTLESLREKDETTIVGDLEDADNLELKVECQNDEFAAYYRQDYEPKVLITYADNPNRKT 92
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F EL +IPNS R +KKI+ A K+FT II+V+ ++ +P+ +L+I LPDG
Sbjct: 93 RIFGRELTRMIPNSISLYRNRSGVKKIVRSAITKNFTDIIIVNEDQCKPNGMLVIHLPDG 152
Query: 118 PTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
PTAHFKLS + + ++K +H T H PE+++NNF TRLG V R++ +LF P+F+GR
Sbjct: 153 PTAHFKLSNVKITTELKRSHKEITEHRPEVIINNFTTRLGFTVARMLGALFHYQPQFKGR 212
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
RVVTFHNQRD+IFFRHHRY F K NGK RL+E GPRF
Sbjct: 213 RVVTFHNQRDYIFFRHHRYEFNLK-------NGK----------------PRLRELGPRF 249
Query: 237 TLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
TL+L SLQHGTFD+K G++EW+ + +M+TSRR+FFL
Sbjct: 250 TLRLKSLQHGTFDSKYGDYEWIIQGRRHDMETSRRKFFL 288
>gi|330794532|ref|XP_003285332.1| brix domain-containing protein [Dictyostelium purpureum]
gi|325084696|gb|EGC38118.1| brix domain-containing protein [Dictyostelium purpureum]
Length = 316
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/270 (46%), Positives = 158/270 (58%), Gaps = 25/270 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIE+ R PD+T+ D+E + DEF S G PK+ ITT + + F
Sbjct: 72 PRTIESMRRPDDTMVDDVDEETQEDINKDEFESYF-DGKPPKVCITTNQRAAKNAVDFAQ 130
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
++PN+ ++ R Y LK+IIE+ +D+T +IVV+ + D L I LP GPTA F
Sbjct: 131 IFPKLLPNAEFFHRRKYHLKEIIEFCNNRDYTDVIVVNETKGIIDELTITHLPYGPTATF 190
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
+L+ LV+ +DI G T H EL++N F TRLG VGR+ S+F Q P F+GRRV T H
Sbjct: 191 RLTNLVMPEDIPGGGEMTSHKAELIVNGFKTRLGLTVGRIFASIFAQDPNFKGRRVCTLH 250
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFR HRYIFETKE +AN LQE GPRFTLKL S
Sbjct: 251 NQRDFIFFRQHRYIFETKE----EAN--------------------LQELGPRFTLKLKS 286
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ GTFDT GGE+ VH MD R++F L
Sbjct: 287 LQKGTFDTSGGEYIHVHHHNMDVDRKKFVL 316
>gi|428178207|gb|EKX47083.1| hypothetical protein GUITHDRAFT_137695 [Guillardia theta CCMP2712]
Length = 316
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 169/277 (61%), Gaps = 28/277 (10%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PRT+EN RE DET+ +D+E+ + DEF G P+ +ITT S +
Sbjct: 62 VPRTLENMREADETIMESEDEEIRRDEEEDEFRKYF-DGEPPRTIITTNNHPSKPLIELV 120
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT------NRREPDALLIIGLP 115
LL +IP S+YY R Y++K I ++A ++ FT++I++ +++ P ++L+I LP
Sbjct: 121 KSLLVLIPGSYYYSRRNYNIKDICKWAGERGFTNLIILGQGLQLGGHKKLPCSMLLIHLP 180
Query: 116 DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
+GPT HF+LS + L IKNH T H PEL+LNNF TRLG RV R SLFPQ P+F G
Sbjct: 181 EGPTLHFRLSSVKLPDQIKNHARATKHKPELILNNFTTRLGQRVSRAFSSLFPQDPQFTG 240
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
RRVVTFH QRD++F RHHRYIF D G+KA RLQE GP+
Sbjct: 241 RRVVTFHCQRDYVFVRHHRYIFP------DDKQGEKA---------------RLQEIGPK 279
Query: 236 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
FTLKL S+Q GTFD+ GE+EW+HK E S+++F L
Sbjct: 280 FTLKLKSMQAGTFDSSRGEYEWIHKKENLGSKKKFAL 316
>gi|195578679|ref|XP_002079191.1| GD22130 [Drosophila simulans]
gi|194191200|gb|EDX04776.1| GD22130 [Drosophila simulans]
Length = 392
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 172/275 (62%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL + D+FSS ++ PK+LIT + F
Sbjct: 141 TIESLREKDQTEVANLNDSDNEELQKELELDDFSSYFERSYEPKVLITFADNPVTKTRKF 200
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTA
Sbjct: 201 GLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTA 260
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++LNNF TRLG VGR++ +LF PEFRGRR V
Sbjct: 261 HFKLSNVKLTSDIKRDHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 320
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F TKE GK+ K L+E GPRFTLK
Sbjct: 321 TFHNQRDYIFFRHHRYEF-TKE-------GKRVK---------------LRELGPRFTLK 357
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 358 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 392
>gi|380014671|ref|XP_003691346.1| PREDICTED: probable ribosome production factor 1-like [Apis florea]
Length = 335
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/280 (43%), Positives = 173/280 (61%), Gaps = 32/280 (11%)
Query: 2 TPRTIENTREPDETVCRPDDD-----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 56
P TIE+ RE DET+ + D EL + DEF++ K PK+LIT C + +
Sbjct: 79 VPHTIESLREKDETIVTGNLDDEENAELKVDFEHDEFAAYYKHTYEPKVLITYCDNPTRK 138
Query: 57 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F EL +IPNS R +KK+++ A ++FT II+++ ++ +P+ +LII LPD
Sbjct: 139 TRIFGVELTRIIPNSISLYRNRSGVKKMVKSAIARNFTDIIIINEDQCKPNGMLIIHLPD 198
Query: 117 GPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
GPTAHFKLS + + ++K +H + H PE++L NF TRLG +GR++ +LF PEF+G
Sbjct: 199 GPTAHFKLSNVKITPELKRSHKEISKHRPEVILTNFTTRLGCTIGRMLGALFHYQPEFKG 258
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
RVVTFHNQRD+IFFRHHRY F+ + +K RL+E GPR
Sbjct: 259 SRVVTFHNQRDYIFFRHHRYQFDLETAK-----------------------PRLRELGPR 295
Query: 236 FTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
FTL+L SLQ GTFD+K GE+EW+ + +M+TSRR+FFL
Sbjct: 296 FTLRLKSLQQGTFDSKHGEYEWLIQGKRHDMETSRRKFFL 335
>gi|384486606|gb|EIE78786.1| hypothetical protein RO3G_03491 [Rhizopus delemar RA 99-880]
Length = 219
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/253 (46%), Positives = 159/253 (62%), Gaps = 40/253 (15%)
Query: 21 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG-TY 79
DDE+ DE SS G PKIL+TT +L+S+ P + + KRG +
Sbjct: 6 DDEVAQDEALDELSSYFS-GKTPKILVTT-------------KLVSMFPEAQFAKRGPKH 51
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 139
+L+++I+ AK+K+FT +++V+ +R+ P+A+ +I LPDGPTA+FKL+ K I NHG
Sbjct: 52 ELRQVIKIAKEKEFTDLLIVNEDRKVPNAITLIHLPDGPTAYFKLTNFTPSKHILNHGRV 111
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFET 199
T H PEL+LNNF TRLGH VGR+ Q+L PQ PEF+GR+V+TFHNQRDFIF R HRY+F
Sbjct: 112 TAHNPELILNNFNTRLGHTVGRMFQALLPQVPEFQGRQVITFHNQRDFIFVRRHRYVFRD 171
Query: 200 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 259
E G LQE GP+FTLKL LQ G + + GE+EW+
Sbjct: 172 TEKVG------------------------LQELGPKFTLKLRWLQKGVYQ-RDGEYEWLF 206
Query: 260 KPEMDTSRRRFFL 272
KPEM+TSR++FFL
Sbjct: 207 KPEMETSRKKFFL 219
>gi|17137746|ref|NP_477479.1| CG6712 [Drosophila melanogaster]
gi|71153717|sp|Q9VKB4.1|RPF1_DROME RecName: Full=Probable ribosome production factor 1; AltName:
Full=Ribosome biogenesis protein RPF1
gi|7297917|gb|AAF53162.1| CG6712 [Drosophila melanogaster]
gi|15291677|gb|AAK93107.1| LD23405p [Drosophila melanogaster]
gi|220945866|gb|ACL85476.1| CG6712-PA [synthetic construct]
gi|220955634|gb|ACL90360.1| CG6712-PA [synthetic construct]
Length = 394
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 171/275 (62%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL D+FSS ++ PK+LIT + F
Sbjct: 143 TIESLREKDQTEVANLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKF 202
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTA
Sbjct: 203 GLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTA 262
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++LNNF TRLG VGR++ +LF PEFRGRR V
Sbjct: 263 HFKLSNVKLTSDIKRDHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 322
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F TKE GK+ K L+E GPRFTLK
Sbjct: 323 TFHNQRDYIFFRHHRYEF-TKE-------GKRVK---------------LRELGPRFTLK 359
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 360 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 394
>gi|157108216|ref|XP_001650128.1| U3 small nucleolar ribonucleoprotein protein imp4 [Aedes aegypti]
gi|108879363|gb|EAT43588.1| AAEL004997-PA [Aedes aegypti]
Length = 417
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 169/278 (60%), Gaps = 30/278 (10%)
Query: 2 TPRTIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRG 57
T TIE+ RE D+T V D++E+ + DEF+ K+ PK+LIT R
Sbjct: 163 TGHTIESLREKDQTSLANVTEDDNEEIANDLENDEFNEYYKKTYEPKVLITYSATPHTRT 222
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F +EL ++PNS + R LK + + A +++FT +IV++ N+++P+ LL+I LP+G
Sbjct: 223 RKFAAELERILPNSLVHARNKARLKNVCKSAIREEFTDLIVINENKKQPEGLLVIHLPEG 282
Query: 118 PTAHFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
PTAHFK+S KD+K N T H PE++L NF+TRLG +GR++ +LF PEF+GR
Sbjct: 283 PTAHFKISNFKSLKDLKKRPSNITSHRPEVILTNFSTRLGLTIGRMLGALFHYEPEFKGR 342
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
RV TFHNQRD+IFFRHH Y F D NGK+ K L+E GPRF
Sbjct: 343 RVATFHNQRDYIFFRHHLYEF--------DKNGKRVK---------------LRELGPRF 379
Query: 237 TLKLVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
TLKL SLQ G FD+K G++EW+ +K SRRRFFL
Sbjct: 380 TLKLRSLQQGLFDSKCGDYEWMITNKRHQMESRRRFFL 417
>gi|312385197|gb|EFR29753.1| hypothetical protein AND_01050 [Anopheles darlingi]
Length = 373
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 163/275 (59%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDETVC----RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE RE DET D +E+ + DEF ++ APK+LIT R F
Sbjct: 122 TIETLREKDETTVANLEEQDQEEVMKDLENDEFCEYYQKSYAPKVLITYNATPHTRTRQF 181
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
S L +IPNS +KR LKK+ + A ++++T I+VV+ ++P+ LL+I LP+GPTA
Sbjct: 182 ASLLRRMIPNSGTFKRQNTRLKKVCQSAIREEYTDIVVVNECNKKPEGLLVIHLPEGPTA 241
Query: 121 HFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFK+S KD+K N T H PE++LNNF TRLG +GR++ SLF PEFRGRR V
Sbjct: 242 HFKISNFKSMKDLKRRVKNITSHRPEVILNNFTTRLGLTIGRMLGSLFHYEPEFRGRRAV 301
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHH Y F D NGK+ K L+E GPRFTLK
Sbjct: 302 TFHNQRDYIFFRHHLYEF--------DKNGKRVK---------------LRELGPRFTLK 338
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ G FD K G++EW+ +K SRRRFFL
Sbjct: 339 LRSLQVGLFDNKCGDYEWMITNKRHQMESRRRFFL 373
>gi|71027549|ref|XP_763418.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350371|gb|EAN31135.1| hypothetical protein, conserved [Theileria parva]
Length = 321
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 161/272 (59%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
TP TIE+ R DET+ P+D E+ DEFS + PK+LIT+ R S + ++
Sbjct: 74 TPHTIESLRRFDETIVDPEDVEVKFEEQIDEFSDHFSRKVTPKLLITSTRRPSEKMRTYM 133
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-REPDALLIIGLPDGPTA 120
ELL V+ NS+Y+ R Y LK+++++A + FTSI++V + P+ L I LP GPT
Sbjct: 134 KELLLVLSNSYYFAREEYKLKEVVKHATENGFTSILLVTEGADKLPNGLYICSLPRGPTT 193
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FKL+ L L ++K G PE+VLN+F TRLG R+GR I SLFP PEF GRRV+T
Sbjct: 194 FFKLTSLKLASEMKGAGVLVATKPEIVLNSFNTRLGRRIGRQIASLFPLDPEFEGRRVIT 253
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD IFFRHHRY+F N KK L+E GPRFTLK
Sbjct: 254 FHNQRDMIFFRHHRYVFR---------NEKKCS---------------LKEIGPRFTLKT 289
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+Q G FD GG +E++ +P++ R+RFF+
Sbjct: 290 HFVQDGLFDLDGGLYEFIWRPDLQVDRKRFFI 321
>gi|195350997|ref|XP_002042023.1| GM26329 [Drosophila sechellia]
gi|194123847|gb|EDW45890.1| GM26329 [Drosophila sechellia]
Length = 392
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 171/275 (62%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL + D+FSS ++ PK+LIT + F
Sbjct: 141 TIESLREKDQTEVANLNDSDNEELQKELELDDFSSYFERSYEPKVLITFADNPVTKTRKF 200
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +K I + A++++FT +++V+ +RR+P+ LL+I LP+GPTA
Sbjct: 201 GLELSRIFPNALVKIRNKSSVKNICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTA 260
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++LNNF TRLG VGR++ +LF PEFRGRR V
Sbjct: 261 HFKLSNVKLTSDIKRDHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 320
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F TKE GK+ K L+E GPRFTLK
Sbjct: 321 TFHNQRDYIFFRHHRYEF-TKE-------GKRVK---------------LRELGPRFTLK 357
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 358 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 392
>gi|300176202|emb|CBK23513.2| unnamed protein product [Blastocystis hominis]
Length = 308
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 165/272 (60%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T E+ RE D+T+ +DDE+ DEF PKI+ITT R S FI
Sbjct: 61 VPKTQEDRREFDDTLVTQNDDEVHCDEADDEFEPYFSHKLTPKIMITTHRKPSKNAYLFI 120
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
SE++++ PN H ++R + L ++ A ++ FT +IV+ N+R+ ++++I LP GPTA
Sbjct: 121 SEVMALFPNCHLFEREDHSLVEMCRRAGEEGFTHLIVIGENQRQVNSMVISHLPTGPTAM 180
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
FK++ + +DI G T H PEL+LNNF TRLG R GR + S+FP +PEF GRRVVTF
Sbjct: 181 FKVTSFIPHEDISGCGAVTDHNPELILNNFNTRLGRRFGRFLGSMFPAAPEFDGRRVVTF 240
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IF R HRY+FE++ KKAK LQE GPRFTLK
Sbjct: 241 HNQRDYIFVRQHRYVFESE---------KKAK---------------LQELGPRFTLKPR 276
Query: 242 SLQHGTFDTKGGEFEW-VHKPEMDTSRRRFFL 272
LQ GTF+T E+EW + +++T RR++FL
Sbjct: 277 YLQVGTFNTLNAEYEWKFNHKQIETGRRKWFL 308
>gi|340501847|gb|EGR28584.1| RNA processing factor 1, putative [Ichthyophthirius multifiliis]
Length = 342
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 163/269 (60%), Gaps = 24/269 (8%)
Query: 5 TIENTREPDETVCRPDDD-ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISE 63
T ++ +E DE DDD EL + DEFSS + G PKIL+TT + F+ +
Sbjct: 97 TTDDKKEIDENFIFDDDDLELQNEENIDEFSSYFENGYQPKILMTTSQRPHGELFDFLKD 156
Query: 64 LLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK 123
+ + PNSHYY R +K+I E A K +T +++ ++R+ + L++I LP GPTA FK
Sbjct: 157 IKNTFPNSHYYPRKALKIKQICEEAPSKGYTDVMIWREHKRQVNELILIHLPKGPTAIFK 216
Query: 124 LSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
++ L +I+NHG PT H PEL+LNNF T LG R+GR + +LFPQ PEF+ R V TFHN
Sbjct: 217 VTSDKLNYEIQNHGRPTDHYPELILNNFNTNLGRRIGRFLAALFPQKPEFKARTVATFHN 276
Query: 184 QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
QRDFIFFRHHRY F T+E G+K + LQE GPRFT+KL L
Sbjct: 277 QRDFIFFRHHRYQF-TEE-------GEKVE---------------LQEIGPRFTMKLKKL 313
Query: 244 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
Q GTFD + GE E+ K +M SR++ F+
Sbjct: 314 QLGTFDYEFGEVEFEAKDKMYQSRKKIFI 342
>gi|195472311|ref|XP_002088444.1| GE12424 [Drosophila yakuba]
gi|194174545|gb|EDW88156.1| GE12424 [Drosophila yakuba]
Length = 393
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 171/275 (62%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL + D+FSS ++ PK+LIT + F
Sbjct: 142 TIESLREKDQTEVANLNDSDNEELQKELEMDDFSSYFERSYEPKVLITFADNPVTKTRKF 201
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTA
Sbjct: 202 GLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTA 261
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR V
Sbjct: 262 HFKLSNVKLTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 321
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F TKE GK+ K L+E GPRFTLK
Sbjct: 322 TFHNQRDYIFFRHHRYEF-TKE-------GKRVK---------------LRELGPRFTLK 358
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 359 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 393
>gi|195443000|ref|XP_002069227.1| GK21080 [Drosophila willistoni]
gi|194165312|gb|EDW80213.1| GK21080 [Drosophila willistoni]
Length = 392
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 168/275 (61%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL D+FSS ++ PK+LIT + F
Sbjct: 141 TIESLREKDQTEVGDLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKF 200
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTA
Sbjct: 201 GLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLMIHLPNGPTA 260
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR V
Sbjct: 261 HFKLSNVKLTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 320
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F + GK+ K L+E GPRFTLK
Sbjct: 321 TFHNQRDYIFFRHHRYEF--------NKEGKRVK---------------LRELGPRFTLK 357
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 358 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 392
>gi|325303276|tpg|DAA34774.1| TPA_inf: ribosome production factor 1 [Amblyomma variegatum]
Length = 234
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 156/258 (60%), Gaps = 25/258 (9%)
Query: 16 VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYK 75
+ + DD+E+ DE ++ ++ PK+LITT R F EL IPN+ +
Sbjct: 1 MVQADDEEVQLDEAMDEMAAYFRKEYIPKLLITTSDNPHTRTIRFCRELKQSIPNADFRW 60
Query: 76 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 135
R +KK +E A ++ ++ I V++ +RR P+ LL+ LPDGPTA+F++S + KDIK
Sbjct: 61 RNRSRIKKTVEQAIERGYSDIAVINEDRRHPNGLLLTHLPDGPTAYFRISSVRFCKDIKG 120
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
+ H PE++LNNF TRLGH V R++ SLF P+F+GRRVVTFHNQRD+IFFRHHRY
Sbjct: 121 RAAYSVHRPEVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTFHNQRDYIFFRHHRY 180
Query: 196 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 255
F E +QE GPRFTL+L SLQ GTFD+K GE+
Sbjct: 181 EFRNAER------------------------VSIQEIGPRFTLRLKSLQKGTFDSKFGEY 216
Query: 256 EWVHK-PEMDTSRRRFFL 272
EWV K EM+TSRRRFFL
Sbjct: 217 EWVLKRHEMETSRRRFFL 234
>gi|194861356|ref|XP_001969766.1| GG10274 [Drosophila erecta]
gi|190661633|gb|EDV58825.1| GG10274 [Drosophila erecta]
Length = 394
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 170/275 (61%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL D+FSS ++ PK+LIT + F
Sbjct: 143 TIESLREKDQTEVANLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKF 202
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A++++FT +++V+ +RR+P+ LL+I LP+GPTA
Sbjct: 203 GLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTA 262
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR V
Sbjct: 263 HFKLSNVKLTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 322
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F TKE GK+ K L+E GPRFTLK
Sbjct: 323 TFHNQRDYIFFRHHRYEF-TKE-------GKRVK---------------LRELGPRFTLK 359
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 360 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 394
>gi|195114572|ref|XP_002001841.1| GI14801 [Drosophila mojavensis]
gi|193912416|gb|EDW11283.1| GI14801 [Drosophila mojavensis]
Length = 407
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 170/275 (61%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D +EL + D+FS+ ++ PK+LIT + F
Sbjct: 156 TIESLREKDQTEVSNLNDSDHEELRKELELDDFSTYFERIYEPKVLITFADNPVTKTRKF 215
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A+++ FT +++V+ +RR+P+ LL+I LP+GPTA
Sbjct: 216 GLELSRIFPNALVKIRNKASVKKICKSAEREQFTDVVIVNEDRRKPNGLLVIHLPNGPTA 275
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK NH T H PE++LNNF TRLG VGR++ +LF PEFRGRR V
Sbjct: 276 HFKLSNVKLTSDIKRNHKEITKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 335
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F +KE GK+ K L+E GPRFTLK
Sbjct: 336 TFHNQRDYIFFRHHRYEF-SKE-------GKRVK---------------LRELGPRFTLK 372
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 373 LRSLQEGTFDSKTGDYTWIISNKRHAMESRRRFFL 407
>gi|66504690|ref|XP_394351.2| PREDICTED: probable ribosome production factor 1-like [Apis
mellifera]
Length = 336
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 173/279 (62%), Gaps = 32/279 (11%)
Query: 3 PRTIENTREPDETVCR-----PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRG 57
P TIE+ RE DET+ ++ EL + DEF++ K PK+LIT C + +
Sbjct: 81 PHTIESLREKDETIVTGSLEDEENAELKVDFEHDEFAAYYKHTYDPKVLITYCDNPTRKT 140
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F EL +IPNS R +KK+++ A ++FT II+++ ++ +P+ +LII LPDG
Sbjct: 141 RIFGVELTRIIPNSISLYRNRSGVKKMVKSAIARNFTDIIIINEDQCKPNGMLIIHLPDG 200
Query: 118 PTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
PTAHFKLS + + ++K +H + H PE++L NF TRLG +GR++ +LF PEF+G
Sbjct: 201 PTAHFKLSNVKITPELKRSHKEISKHRPEVILTNFTTRLGCTIGRMLGALFHYQPEFKGS 260
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
RVVTFHNQRD+IFFRHH+Y F+ + +K RL+E GPRF
Sbjct: 261 RVVTFHNQRDYIFFRHHKYQFDLETAK-----------------------PRLRELGPRF 297
Query: 237 TLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
TL+L SLQ GTF++K GE+EW+ + +M+TSRR+FFL
Sbjct: 298 TLRLKSLQQGTFNSKHGEYEWLIQGKRHDMETSRRKFFL 336
>gi|328871991|gb|EGG20361.1| brix domain-containing protein [Dictyostelium fasciculatum]
Length = 315
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 159/273 (58%), Gaps = 26/273 (9%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITT-CRFNSNRGPA 59
+ PRTIE R+ DET+ + +D+E+ + DEF+S G PK+ ITT R
Sbjct: 68 LLPRTIERLRKGDETIVQDEDEEVSEDVNLDEFASYF-DGKEPKVCITTNTRPQGRHITP 126
Query: 60 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
F+ + ++PN Y+ R + LK I+++ +D+T ++VV+ + ++++ LP GPT
Sbjct: 127 FVKMIEEILPNCEYFPRKDFKLKDIVKFCANRDYTDLLVVNEDNGVVHTMMMVHLPYGPT 186
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
F+++ + + I+N G T H PEL++NNF TRLG VGR+ S+FPQ P F+GRRVV
Sbjct: 187 VQFRVTNITMPDKIENCGKMTSHKPELIINNFTTRLGLTVGRMFASMFPQDPNFKGRRVV 246
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
T HNQRDFIFFRHHRY F + E LQE GPRFTLK
Sbjct: 247 TLHNQRDFIFFRHHRYEFASNEK------------------------AYLQELGPRFTLK 282
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L+ LQ GTFD GGE+ +HK +MD R+ F L
Sbjct: 283 LMYLQKGTFDATGGEYIHLHKADMDVDRKTFVL 315
>gi|195387884|ref|XP_002052622.1| GJ20668 [Drosophila virilis]
gi|194149079|gb|EDW64777.1| GJ20668 [Drosophila virilis]
Length = 395
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 170/275 (61%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL + D+FS+ ++ PK+LIT + F
Sbjct: 144 TIESLREKDQTEVSNLNDSDNEELRKELEIDDFSTYFERIYEPKVLITFADNPVTKTRKF 203
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A+++ FT +++V+ +RR+P+ LL+I LP+GPTA
Sbjct: 204 GLELSRIFPNALVKIRNKASVKKICKSAEREQFTDVVIVNEDRRKPNGLLVIHLPNGPTA 263
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK NH T H PE++L NF TRLG VGR++ +LF PEFRGRR V
Sbjct: 264 HFKLSNVKLTSDIKRNHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 323
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F +KE GK+ K L+E GPRFTLK
Sbjct: 324 TFHNQRDYIFFRHHRYEF-SKE-------GKRVK---------------LRELGPRFTLK 360
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 361 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 395
>gi|289742039|gb|ADD19767.1| ribosome bioproteinsis protein RPF1 [Glossina morsitans morsitans]
Length = 385
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 170/276 (61%), Gaps = 31/276 (11%)
Query: 5 TIENTREPDETVC----RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T+ +++EL + DEFS+ ++ PK+LIT + F
Sbjct: 133 TIESLREADQTIVTNLNASENEELRQELECDEFSAYFERIYEPKVLITFADNPVTKTRKF 192
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KK+ + A ++++T I++++ +RR+P+ LL+I LP+GPTA
Sbjct: 193 GLELGRIFPNALVKIRNRSSVKKMCQSAIREEYTDIVIINEDRRKPNGLLVIHLPNGPTA 252
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++LNNF TRLG +GR++ +LF PEF+GRRV
Sbjct: 253 HFKLSNVKLTTDIKRDHKEITKHRPEVILNNFTTRLGLTIGRMLGALFHHDPEFKGRRVA 312
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F +GK+AK L+E GPRFTLK
Sbjct: 313 TFHNQRDYIFFRHHRYEF--------SKDGKRAK---------------LRELGPRFTLK 349
Query: 240 LVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ + M+ SRRRF L
Sbjct: 350 LRSLQEGTFDSKTGDYVWIITNKRHSMEASRRRFHL 385
>gi|412994068|emb|CCO14579.1| predicted protein [Bathycoccus prasinos]
Length = 493
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 143/206 (69%), Gaps = 6/206 (2%)
Query: 2 TPRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
P+TIEN R DET + R D++E+ + DEF+S +PKI+ITT R S F
Sbjct: 91 VPKTIENQRVIDETHIVREDEEEIHNEDKEDEFASYFSFNSSPKIIITTSRKPSGAMFKF 150
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-----REPDALLIIGLP 115
+ L +V+PN++YY R Y +K+++++A + FT +++ + N+ + LL + LP
Sbjct: 151 LENLFTVVPNAYYYARRNYHVKEMVKHATARGFTDLLIFNENKTFSKGARVNGLLHVHLP 210
Query: 116 DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
+GP+ +KL+ L+L K I+NHG T H PEL+LNNF+TRLGHR+GR+ SLFPQ PEF+G
Sbjct: 211 EGPSVMYKLTNLILSKKIRNHGRATSHYPELLLNNFSTRLGHRIGRMFASLFPQKPEFKG 270
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKE 201
RRVVTFHNQRDFIFFRHHRY+FE K+
Sbjct: 271 RRVVTFHNQRDFIFFRHHRYVFEEKK 296
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Query: 225 VITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMD---TSRRRFFL 272
VI RLQE GPRFTLKL+S+Q GTFD+K GEFE+V E D +RR+F L
Sbjct: 443 VIARLQELGPRFTLKLMSVQKGTFDSKHGEFEYVRSTETDGTRKNRRKFVL 493
>gi|195035413|ref|XP_001989172.1| GH10194 [Drosophila grimshawi]
gi|193905172|gb|EDW04039.1| GH10194 [Drosophila grimshawi]
Length = 400
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/275 (44%), Positives = 168/275 (61%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL + D+FS+ ++ PK+LIT + F
Sbjct: 149 TIESLREKDQTEVSNLNDSDNEELRKELEIDDFSTYFERIYEPKVLITFADNPVTKTRKF 208
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A+++ FT +++++ +RR+P+ALL+I LP+GPTA
Sbjct: 209 GLELSRIFPNALVKIRNKASVKKICKSAEREQFTDVVIINEDRRQPNALLVIHLPNGPTA 268
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR
Sbjct: 269 HFKLSNVKLTTDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAA 328
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F + GK+ K L+E GPRFTLK
Sbjct: 329 TFHNQRDYIFFRHHRYEF--------NKEGKRVK---------------LRELGPRFTLK 365
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 366 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 400
>gi|340058255|emb|CCC52609.1| putative RNA processing factor 1 [Trypanosoma vivax Y486]
Length = 331
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/271 (41%), Positives = 157/271 (57%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDETVCR-PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T E R PD T P+D E+ D DEF+S K+G P ILITT R F+
Sbjct: 85 PKTKERMRRPDPTFLESPNDTEILRDEDDDEFASFFKEGRKPTILITTGEHPCYRTRQFV 144
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E L + PNS Y R Y LK+I ++ ++FT +IVV +EP +L++ LP GPTA
Sbjct: 145 KEALWLFPNSIYRPRKDYTLKEITQFCINRNFTDLIVVTDRIKEPHSLIVSHLPTGPTAM 204
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS + +K+ T H PEL+ NF+TRLG R+ R+++ LFP + ++ GR V TF
Sbjct: 205 FRLSNFLTHAQLKDPAPRTEHYPELIFKNFSTRLGRRIHRMLECLFPATRDYAGRAVATF 264
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IF R HRYIF++ E+ R+QE GPRFT++L+
Sbjct: 265 HNQRDYIFMRTHRYIFDSLEA------------------------VRIQEMGPRFTMRLL 300
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ GTFD++ GE+EW K E D + ++L
Sbjct: 301 SLQSGTFDSQFGEYEWFRKKEHDADKLEWYL 331
>gi|194765991|ref|XP_001965108.1| GF23434 [Drosophila ananassae]
gi|190617718|gb|EDV33242.1| GF23434 [Drosophila ananassae]
Length = 389
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 169/275 (61%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL + D+FSS ++ PK+LIT + F
Sbjct: 138 TIESLREKDQTEVSNLNDSDNEELQKELELDDFSSYFERSYEPKVLITFADNPVTKTRKF 197
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A+++ FT +++++ +RR+P+ LL+I LP GPTA
Sbjct: 198 GLELSRIFPNALVKIRNKSSVKKICKSAEREQFTDVVIINEDRRKPNGLLVIHLPSGPTA 257
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFK+S + L DIK +H T H PE++L NF TRLG VGR++ +LF PEFRGRR V
Sbjct: 258 HFKVSNVKLTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFRGRRAV 317
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F +KE GK+ K L+E GPRFTLK
Sbjct: 318 TFHNQRDYIFFRHHRYEF-SKE-------GKRVK---------------LRELGPRFTLK 354
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 355 LRSLQEGTFDSKTGDYAWIISNKRHSMESRRRFFL 389
>gi|345482112|ref|XP_001607187.2| PREDICTED: probable ribosome production factor 1-like [Nasonia
vitripennis]
Length = 336
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/280 (42%), Positives = 167/280 (59%), Gaps = 32/280 (11%)
Query: 2 TPRTIENTREPDETVCR-----PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 56
P TIE+ RE DET+ D++E+ + DEF+ +Q PK+LIT +
Sbjct: 80 VPHTIESLREKDETMIYGEIEDEDNEEVKIDMEHDEFAPYYRQEYEPKVLITYADNPHTK 139
Query: 57 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F EL +IPNS R +KK+++ + +T IIV++ ++ +P+ +LI+ LP+
Sbjct: 140 TRIFGRELTRIIPNSTSLYRNRSGVKKMVKSCIENGYTDIIVINEDQCKPNGMLIVHLPE 199
Query: 117 GPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
GPT H KLS + + ++K +H T H PE+VLNNF TRLGH V R+ ++F PEF+G
Sbjct: 200 GPTMHCKLSNVKITPELKRSHKEITNHRPEVVLNNFTTRLGHSVARMFGAIFHHQPEFKG 259
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
RRVVTFHNQRD+IFFRHHRY F K K RL+E GPR
Sbjct: 260 RRVVTFHNQRDYIFFRHHRYEFNPKTGK-----------------------PRLRELGPR 296
Query: 236 FTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
FTL+L SLQHGTFD+K G +EW+ + +++TSRR+FFL
Sbjct: 297 FTLRLRSLQHGTFDSKYGNYEWIIQGRRHQLETSRRKFFL 336
>gi|170046389|ref|XP_001850750.1| ribosome production factor 1 [Culex quinquefasciatus]
gi|167869171|gb|EDS32554.1| ribosome production factor 1 [Culex quinquefasciatus]
Length = 365
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/275 (44%), Positives = 164/275 (59%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDETV----CRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE DET D +E+ + DEF+ + PK+LIT R F
Sbjct: 114 TIESLREKDETALANAAEEDTEEIANDLENDEFNEYYAKSYEPKVLITYNATPHTRTRRF 173
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
SEL ++PNS + R LKK+ + A +++FT ++V++ N ++P+ +L+I LPDGPTA
Sbjct: 174 GSELERILPNSMVHSRNKATLKKVCQSAIREEFTDLVVINENNKQPEGMLVIHLPDGPTA 233
Query: 121 HFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFK+S D+K G T H PE++L NF TRLG +GR++ +LF PEF+GRRV
Sbjct: 234 HFKISNYKSLHDMKKRRGMITSHRPEVILTNFTTRLGLTIGRMLGALFHYDPEFKGRRVA 293
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHH Y F D NGK+ K L+E GPRFTLK
Sbjct: 294 TFHNQRDYIFFRHHLYEF--------DKNGKRVK---------------LRELGPRFTLK 330
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ G FD+K G++EW+ +K + SRRRFFL
Sbjct: 331 LRSLQTGLFDSKCGDYEWMITNKRHLMESRRRFFL 365
>gi|195160036|ref|XP_002020882.1| GL14129 [Drosophila persimilis]
gi|194117832|gb|EDW39875.1| GL14129 [Drosophila persimilis]
Length = 398
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 170/275 (61%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL + D+FSS ++ PK+LIT + F
Sbjct: 147 TIESLREKDQTEVANLNDSDNEELQKELEIDDFSSYFERVYEPKVLITFADNPVTKTRKF 206
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A++++FT +++++ +RR+P+ LL+I LP+GPTA
Sbjct: 207 GLELSRIFPNALVKIRNKASVKKICKSAEREEFTDVVIINEDRRKPNGLLVIHLPNGPTA 266
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++L NF TRLG VGR++ +LF PEF+GRR
Sbjct: 267 HFKLSNVKLTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFKGRRAA 326
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F +KE GK+ K L+E GPRFTLK
Sbjct: 327 TFHNQRDYIFFRHHRYEF-SKE-------GKRVK---------------LRELGPRFTLK 363
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 364 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 398
>gi|198475760|ref|XP_001357146.2| GA19804 [Drosophila pseudoobscura pseudoobscura]
gi|198137947|gb|EAL34213.2| GA19804 [Drosophila pseudoobscura pseudoobscura]
Length = 396
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 170/275 (61%), Gaps = 30/275 (10%)
Query: 5 TIENTREPDET----VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
TIE+ RE D+T + D++EL + D+FSS ++ PK+LIT + F
Sbjct: 145 TIESLREKDQTEVANLNDSDNEELQKELEIDDFSSYFERVYEPKVLITFADNPVTKTRKF 204
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
EL + PN+ R +KKI + A++++FT +++++ +RR+P+ LL+I LP+GPTA
Sbjct: 205 GLELSRIFPNALVKIRNKASVKKICKSAEREEFTDVVIINEDRRKPNGLLVIHLPNGPTA 264
Query: 121 HFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
HFKLS + L DIK +H T H PE++L NF TRLG VGR++ +LF PEF+GRR
Sbjct: 265 HFKLSNVKLTSDIKRDHKEITKHRPEVILTNFTTRLGLTVGRMLGALFHHDPEFKGRRAA 324
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD+IFFRHHRY F +KE GK+ K L+E GPRFTLK
Sbjct: 325 TFHNQRDYIFFRHHRYEF-SKE-------GKRVK---------------LRELGPRFTLK 361
Query: 240 LVSLQHGTFDTKGGEFEWV--HKPEMDTSRRRFFL 272
L SLQ GTFD+K G++ W+ +K SRRRFFL
Sbjct: 362 LRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 396
>gi|242009892|ref|XP_002425716.1| U3 small nucleolar ribonucleoprotein imp4, putative [Pediculus
humanus corporis]
gi|212509617|gb|EEB12978.1| U3 small nucleolar ribonucleoprotein imp4, putative [Pediculus
humanus corporis]
Length = 248
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 161/246 (65%), Gaps = 28/246 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+SS ++ PK+LITT ++ F EL ++PNS R +KK+++ A +
Sbjct: 27 DEYSSYFEKSYVPKVLITTSDNPLSKTRRFCKELTRILPNSIAKYRHRMSVKKMVKAATE 86
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLN 149
++F+ II+V+ ++++P+ LL+I LPDGPTAHF+LS + L ++ K++ + H PE++LN
Sbjct: 87 RNFSDIIIVNEDQKQPNGLLLIHLPDGPTAHFRLSNVRLSNELGKHYKQISKHRPEVILN 146
Query: 150 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
NF TRLG+ + R++ +LF PEF+GRR VTFHNQRD+IFFRHHRY+F
Sbjct: 147 NFNTRLGYSISRMLAALFHYEPEFKGRRCVTFHNQRDYIFFRHHRYMF------------ 194
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTS 266
++AK RL E GPRFTLKL SLQ GTFD+K GE+EW+ + EM+TS
Sbjct: 195 --TENAKP----------RLMELGPRFTLKLRSLQLGTFDSKTGEYEWIIQGRRHEMETS 242
Query: 267 RRRFFL 272
RR+FFL
Sbjct: 243 RRKFFL 248
>gi|303274317|ref|XP_003056480.1| ribosome biogenesis protein RPF1 [Micromonas pusilla CCMP1545]
gi|226462564|gb|EEH59856.1| ribosome biogenesis protein RPF1 [Micromonas pusilla CCMP1545]
Length = 366
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 185/340 (54%), Gaps = 69/340 (20%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R ++T + +D ++ DEF+S PK+++TT R S +
Sbjct: 27 VPKTIDNQRVKNDTFFQENDLDISGEIVEDEFASYFVNSTDPKVVLTTSRKPSQEMFRLL 86
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR-----EPDALLIIGLPD 116
+ SVIPN++YY R +Y +++II ++ + FT I+V + NR+ + + LL I LP
Sbjct: 87 QSIFSVIPNAYYYARRSYYIEEIIRHSNARGFTDILVFNENRKFSKGAKINGLLHIHLPV 146
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPT ++LS LV + I+NHG T H PEL+LNNF+TRLGHR+GR+ S+FPQ PEF+GR
Sbjct: 147 GPTCLYRLSSLVYSEKIRNHGRSTTHHPELILNNFSTRLGHRIGRMFASIFPQRPEFQGR 206
Query: 177 RVVTFHNQRDFIFFRHHRYIFETK------------------------------------ 200
RVVTFHNQRDFIFFRHHRY+FE +
Sbjct: 207 RVVTFHNQRDFIFFRHHRYVFEVRNESDEDFLAKFKADSLCESEQDLVQSYTSAELTCNT 266
Query: 201 ----ESKGSDANGKKAKDA-------KSEKTSQ--------------QKVITRLQECGPR 235
ESK S + DA KS+ Q Q + RLQE GPR
Sbjct: 267 QKNSESKNSQRRERAFSDAFLPVTEIKSDAHHQSRELMINCKHSIERQALRARLQELGPR 326
Query: 236 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS---RRRFFL 272
FTLKL+S+Q GTF++K GE+E+V + S RR+F L
Sbjct: 327 FTLKLLSIQKGTFNSKHGEYEYVFSGDAGGSKYDRRKFVL 366
>gi|313246469|emb|CBY35375.1| unnamed protein product [Oikopleura dioica]
Length = 378
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 146/240 (60%), Gaps = 29/240 (12%)
Query: 4 RTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA--FI 61
+TIE+ R+ DET PDD E+ DE S G PKILI T N+ +GP
Sbjct: 164 KTIESMRKFDETTVEPDDAEVDWEEQNDELSDYFNNGTVPKILIMTR--NAPKGPMVKMC 221
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE-PDALLIIGLPDGPTA 120
ELL IPNS ++ R + LKKII A KK FT++IVV +R+ P+ L II LP GPTA
Sbjct: 222 HELLKTIPNSQFFFRQGFALKKIIPQAIKKGFTAMIVVSADRKWVPNDLKIIYLPGGPTA 281
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
HFK+S + LR+ K PT H+PEL+LNNF +RLG R+GR+ +LFPQ PEF GR+VVT
Sbjct: 282 HFKMSSVRLREKTKGGDTPTTHLPELILNNFKSRLGRRIGRMFAALFPQVPEFEGRQVVT 341
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IFFR HRYIF +++ G L+E GPRFTLKL
Sbjct: 342 FHNQRDYIFFRQHRYIFRSEKRAG------------------------LKELGPRFTLKL 377
>gi|71754567|ref|XP_828198.1| RNA processing factor 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833584|gb|EAN79086.1| RNA processing factor 1, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261334004|emb|CBH16998.1| RNA processing factor 1, putative [Trypanosoma brucei gambiense
DAL972]
Length = 331
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 115/271 (42%), Positives = 157/271 (57%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T E R PD T V +D E+ DEF+S K+G PKILITT R F+
Sbjct: 85 PKTKERMRLPDVTFVEDKNDAEILRDEADDEFASYFKEGRKPKILITTGEHPCFRTKLFV 144
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E L + PNS Y R Y+LK+I ++ ++FT +IVV +EP L+I LP+GPTA
Sbjct: 145 KEALWLFPNSIYRPRKKYNLKEITQFCINREFTDLIVVTDRLKEPYNLIISHLPEGPTAM 204
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F++S + +K+ T H PEL+ NF TRLG R+ RL++ LFP + ++ GR V TF
Sbjct: 205 FRVSNFMTHAQLKDPAPRTEHYPELIFKNFDTRLGRRINRLLECLFPATRDYEGRAVATF 264
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IF R HRYIF++ ++ R+QE GPRFTL+L+
Sbjct: 265 HNQRDYIFMRTHRYIFDSLDA------------------------VRIQEMGPRFTLRLL 300
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ GTFDT+ GE+EW K E D + ++L
Sbjct: 301 SLQSGTFDTQFGEYEWFRKKEHDDDKLEWYL 331
>gi|50556604|ref|XP_505710.1| YALI0F21483p [Yarrowia lipolytica]
gi|49651580|emb|CAG78521.1| YALI0F21483p [Yarrowia lipolytica CLIB122]
Length = 293
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 158/272 (58%), Gaps = 36/272 (13%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TIE R DET+ + + E DEF ++G PK+LITT + + F
Sbjct: 57 VPDTIEAKRVYDETIAQEMEGE-------DEFKEYFEEGKPPKVLITTSKRARGQAYDFA 109
Query: 62 SELLSVIPNSHYYKR-GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
L +IP S + KR G + + +I + ++D+T ++V++ ++++ + L I LP+GPT
Sbjct: 110 DLLYDIIPGSEFKKRVGDFTMTQIAKMCAERDYTDLVVINEDKKKVNGLTFIHLPEGPTM 169
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F +S L + K+IK HG T HIPEL+LNNF+TRLG VGRL QS+FPQ PEF GR+VVT
Sbjct: 170 YFSVSSLKMPKEIKGHGRSTTHIPELILNNFSTRLGKTVGRLFQSMFPQQPEFVGRQVVT 229
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F+ +E G LQE GP+FTL+L
Sbjct: 230 LHNQRDWIFFRRHRYVFKNEERVG------------------------LQELGPQFTLRL 265
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G GE EW H+ MD +++F L
Sbjct: 266 RRLQRGI----RGEVEWEHRSAMDKDKKKFHL 293
>gi|407404357|gb|EKF29844.1| ribosome biogenesis protein, putative [Trypanosoma cruzi
marinkellei]
Length = 330
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 158/271 (58%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T E R PD T+ +D ++AD EF++ K+G P ILITT R F+
Sbjct: 84 PKTKERLRRPDVTIVEDKEDAEIVRDEADDEFAAYYKEGRKPSILITTGEHPCFRTKQFV 143
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
ELL + PNS Y R Y LK+I ++ ++FT ++V+ +EP L+I LP+GPTA
Sbjct: 144 KELLWLFPNSTYRPRKDYTLKEITQFCINREFTDLVVITDRLKEPYNLIISHLPEGPTAM 203
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS + +K+ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V TF
Sbjct: 204 FRLSNFMTHAQLKDPAPRTEHYPELIFKNFDTRLGRRIHRMLECLFPATRDYAGRAVATF 263
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IF R HRYIF++ E+ R+QE GPRFT++L+
Sbjct: 264 HNQRDYIFMRTHRYIFDSLEA------------------------VRIQEMGPRFTMRLL 299
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ GTFDT+ GE+EW K E D+ + +++
Sbjct: 300 SLQLGTFDTQFGEYEWFRKKEHDSDKLEWYI 330
>gi|5834783|emb|CAB55338.1| hypothetical protein [Yarrowia lipolytica]
Length = 333
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 158/272 (58%), Gaps = 36/272 (13%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TIE R DET+ + + E DEF ++G PK+LITT + + F
Sbjct: 97 VPDTIEAKRVYDETIAQEMEGE-------DEFKEYFEEGKPPKVLITTSKRARGQAYDFA 149
Query: 62 SELLSVIPNSHYYKR-GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
L +IP S + KR G + + +I + ++D+T ++V++ ++++ + L I LP+GPT
Sbjct: 150 DLLYDIIPGSEFKKRVGDFTMTQIAKMCAERDYTDLVVINEDKKKVNGLTFIHLPEGPTM 209
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F +S L + K+IK HG T HIPEL+LNNF+TRLG VGRL QS+FPQ PEF GR+VVT
Sbjct: 210 YFSVSSLKMPKEIKGHGRSTTHIPELILNNFSTRLGKTVGRLFQSMFPQQPEFVGRQVVT 269
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F+ +E G LQE GP+FTL+L
Sbjct: 270 LHNQRDWIFFRRHRYVFKNEERVG------------------------LQELGPQFTLRL 305
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G GE EW H+ MD +++F L
Sbjct: 306 RRLQRGI----RGEVEWEHRSAMDKDKKKFHL 333
>gi|320580314|gb|EFW94537.1| nucleolar ribosomal biogenesis factor RPF1p, putative [Ogataea
parapolymorpha DL-1]
Length = 295
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 156/272 (57%), Gaps = 35/272 (12%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TIEN R DETV + EL +D E+ + + PKILITT F
Sbjct: 58 VPNTIENMRVYDETV----NTELEGEDDFAEYFT--NREKEPKILITTSPHAKKAAYKFA 111
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
S L+ +IPNS + KR Y +K + EY +DFT +IV++ +++ + + I LP GPT
Sbjct: 112 STLMEIIPNSSFVKRKREYTMKDMSEYCSNRDFTHLIVINEDKKVVNGITFIHLPQGPTF 171
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F +S L RK I HGN T HIPEL+LNNF TRLG VGRL QSL P PE +GR+V+T
Sbjct: 172 YFSISSLRDRKQIVGHGNSTEHIPELILNNFTTRLGQTVGRLFQSLLPHKPEIQGRQVIT 231
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F+ +E G LQE GP+FTLKL
Sbjct: 232 LHNQRDYIFFRMHRYVFKNEEKVG------------------------LQELGPQFTLKL 267
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+Q G + E +W H+P+MD +++F+L
Sbjct: 268 RRVQRGIKE----EIDWEHRPDMDKEKKKFYL 295
>gi|407843766|gb|EKG01621.1| hypothetical protein TCSYLVIO_007381 [Trypanosoma cruzi]
Length = 330
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 156/271 (57%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T E R PD T+ DD ++AD EF++ K+ P ILITT R F+
Sbjct: 84 PKTKERLRRPDVTIVEEKDDAEIVRDEADDEFAAYYKEARKPSILITTGEHPCFRTKQFV 143
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E L + PNS Y R Y LK+I ++ ++FT ++V+ +EP L+I LP+GPTA
Sbjct: 144 KEALWLFPNSTYRPRKDYTLKEITQFCINREFTDLVVITDRLKEPYNLIISHLPEGPTAT 203
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS + +K+ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V TF
Sbjct: 204 FRLSNFMAHAQLKDPAPRTEHYPELIFKNFDTRLGRRIHRMLECLFPATRDYAGRAVATF 263
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IF R HRYIF++ E+ R+QE GPRFT++L+
Sbjct: 264 HNQRDYIFMRTHRYIFDSLEA------------------------VRIQEMGPRFTMRLL 299
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ GTFDT+ GE+EW K E D+ + +++
Sbjct: 300 SLQLGTFDTQFGEYEWFRKKEHDSDKLEWYI 330
>gi|213409636|ref|XP_002175588.1| brix domain-containing protein Rpf1 [Schizosaccharomyces japonicus
yFS275]
gi|212003635|gb|EEB09295.1| brix domain-containing protein Rpf1 [Schizosaccharomyces japonicus
yFS275]
Length = 306
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/274 (42%), Positives = 168/274 (61%), Gaps = 21/274 (7%)
Query: 2 TPRTIENTREPDETVCRPD-DDELFAGNDADEFSSIL-KQGCAPKILITTCRFNSNRGPA 59
P+TIE+ R DET+ + + D+EL A DE++S ++ APK+L+TT + S +
Sbjct: 51 VPQTIESKRVYDETLVQEEPDEELQAELQDDEYASYYNEERRAPKLLVTTSKRASRKAYE 110
Query: 60 FISELLSVIPNSHYYKR-GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
F SELL PN+ + KR G ++ +I E A K+ +T ++V++ + + +AL ++ LP GP
Sbjct: 111 FASELLDCFPNAEFRKRTGNIEIHEIAEAASKRGYTDLLVLNEDHKVTNALTLVHLPSGP 170
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
+ +F LS L L K+I NHG TGHIPEL++NNF+TRLG V R QSLF Q P+ +GR+V
Sbjct: 171 SFYFTLSSLQLAKEISNHGRATGHIPELIINNFSTRLGITVARAFQSLFLQQPQIQGRQV 230
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
VT H QRDF+FFR HRY+F+ K S+ D G LQE GPRFT+
Sbjct: 231 VTIHCQRDFLFFRRHRYMFKEK-SQMPDGIGAG-----------------LQELGPRFTM 272
Query: 239 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L +Q G +D K GE + ++ RRRF+L
Sbjct: 273 RLRMVQRGIWDNKKGEVFFESNAGEESDRRRFWL 306
>gi|45190514|ref|NP_984768.1| AEL093Cp [Ashbya gossypii ATCC 10895]
gi|44983456|gb|AAS52592.1| AEL093Cp [Ashbya gossypii ATCC 10895]
gi|374107987|gb|AEY96894.1| FAEL093Cp [Ashbya gossypii FDAG1]
Length = 292
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 157/272 (57%), Gaps = 35/272 (12%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI++ R DE++ + + E DE + G PKIL+TT + F
Sbjct: 55 VPKTIDSMRVFDESIGQDVEGE------QDELQAFFNSGEPPKILLTTNVNARKKAYEFA 108
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ L+ V+PN + KR Y LK+I E+ +++T ++V++ +++E L I LP GP+
Sbjct: 109 NVLIEVLPNVTFVKRKFGYKLKEIAEFCNNRNYTDLVVINEDKKEVTGLTFIHLPAGPSF 168
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+FKLS V + I HG PT HIPEL+LNNF+TRLG VGRL QS+FPQSP+ GR+V+T
Sbjct: 169 YFKLSSYVEVEKIHGHGRPTSHIPELILNNFSTRLGKTVGRLFQSIFPQSPDIEGRQVIT 228
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRYIF +E G LQE GP+FTLKL
Sbjct: 229 LHNQRDYIFFRRHRYIFRNEEKVG------------------------LQELGPQFTLKL 264
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G + E EW +KPEMD ++RF L
Sbjct: 265 RRLQRGIKE----ETEWEYKPEMDKDKKRFHL 292
>gi|342185234|emb|CCC94717.1| ribosome biogenesis protein [Trypanosoma congolense IL3000]
Length = 331
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/271 (42%), Positives = 154/271 (56%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T E R PD T V +D E+ DEF+S K+G PKILITT R F+
Sbjct: 85 PKTKERMRLPDVTFVEDKNDTEILCDEADDEFASYFKEGRKPKILITTGERPCFRTKQFV 144
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E L + PN+ Y R Y LK+I ++ +DFT ++VV +EP L++ LP GPTA
Sbjct: 145 KEALWLFPNATYRPRKDYTLKEITQFCINRDFTDLLVVTDRIKEPYNLIVSHLPQGPTAM 204
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS + +K+ T H PEL+ NF TRLG R+ RL++ LFP + ++ GR V TF
Sbjct: 205 FRLSNFATHEQLKDPAPRTEHYPELIFKNFDTRLGRRINRLLECLFPATRDYAGRAVATF 264
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IF R HRYIF+ G DA R+QE GPRFT++L+
Sbjct: 265 HNQRDYIFMRTHRYIFD-----GLDA-------------------VRIQEMGPRFTMRLL 300
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ GTFDT+ GE+EW K D + ++L
Sbjct: 301 SLQSGTFDTQFGEYEWFRKKVHDADKLEWYL 331
>gi|156083867|ref|XP_001609417.1| RNA processing factor 1 [Babesia bovis T2Bo]
gi|154796668|gb|EDO05849.1| RNA processing factor 1, putative [Babesia bovis]
Length = 301
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 160/273 (58%), Gaps = 25/273 (9%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
+ P TIE+ R DET+ R DD E+ A DEF++ + PK+ +T+ R S + F
Sbjct: 53 LEPLTIESMRRYDETMVRTDDAEIAAEERIDEFAAHFRGDREPKLYLTSSRRPSEKMRRF 112
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-REPDALLIIGLPDGPT 119
I ELL +IPN +Y+ R L+ ++ +A F++I+++ + + P+ L I LP GPT
Sbjct: 113 IKELLLIIPNIYYFARDENKLEDMVRHATDGGFSAILLITQGQGKLPNGLYICSLPYGPT 172
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
F+L+ L++ D+K G+ T E++LN+F TRLG RVGR I SLFP PE RRV+
Sbjct: 173 TFFRLTSLLMASDMKGAGSFTESKCEIILNHFDTRLGRRVGRQIASLFPLDPELEARRVI 232
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFHNQRD IFFRHHRY+F N KK L+E GPRFTLK
Sbjct: 233 TFHNQRDMIFFRHHRYVFR---------NMKKCS---------------LKEIGPRFTLK 268
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ S+Q GTF G FE+V +P+M R+RFF+
Sbjct: 269 VHSVQEGTFCLDKGLFEFVWRPDMQVDRKRFFI 301
>gi|406603252|emb|CCH45231.1| Ribosome production factor 1 [Wickerhamomyces ciferrii]
Length = 291
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/272 (43%), Positives = 151/272 (55%), Gaps = 37/272 (13%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TIE+ R DETV + + E D+F S G PKIL+TT F
Sbjct: 56 VPETIESKRVYDETVGQEREGE-------DDFDSYF-DGREPKILLTTNANARKAAYEFA 107
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
L+ +PN + KR Y +K I Y + FT +IV++ +++ + + I LP+GPT
Sbjct: 108 DMLMDALPNVTFVKRKREYSMKDISGYCTNRGFTDLIVINEDKKNVNGITFIHLPEGPTF 167
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F ++ LV K I+ HG T HIPELVLNNF+TRLG VGRL QSLFPQ PEF GR VVT
Sbjct: 168 YFSITSLVNGKKIQGHGTATDHIPELVLNNFSTRLGQTVGRLFQSLFPQKPEFEGRNVVT 227
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRDFIFFR HRY+F +E G LQE GP+FTLKL
Sbjct: 228 LHNQRDFIFFRRHRYVFRNEEKVG------------------------LQELGPQFTLKL 263
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+Q G E EW H+P+MD +R+F+L
Sbjct: 264 RRVQKGI----KNEIEWEHRPDMDRDKRKFYL 291
>gi|71659749|ref|XP_821595.1| RNA processing factor 1 [Trypanosoma cruzi strain CL Brener]
gi|70886978|gb|EAN99744.1| RNA processing factor 1, putative [Trypanosoma cruzi]
Length = 330
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 155/271 (57%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T E R PD T+ DD ++AD EF++ + P ILITT R F+
Sbjct: 84 PKTKERLRRPDVTIVEEKDDAEIVRDEADDEFAAYYNEARKPSILITTGEHPCFRTKQFV 143
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
E L + PNS Y R Y LK+I ++ ++FT ++V+ +EP L+I LP+GPTA
Sbjct: 144 KEALWLFPNSTYRPRKDYTLKEITQFCINREFTDLVVITDRLKEPYNLIISHLPEGPTAT 203
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F+LS + +K+ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V TF
Sbjct: 204 FRLSNFMAHAQLKDPAPRTEHYPELIFKNFDTRLGRRIHRMLECLFPATRDYAGRAVATF 263
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IF R HRYIF++ E+ R+QE GPRFT++L+
Sbjct: 264 HNQRDYIFMRTHRYIFDSLEA------------------------VRIQEMGPRFTMRLL 299
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
SLQ GTFDT+ GE+EW K E D+ + +++
Sbjct: 300 SLQLGTFDTQFGEYEWFRKKEHDSDKLEWYI 330
>gi|156837572|ref|XP_001642808.1| hypothetical protein Kpol_365p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156113379|gb|EDO14950.1| hypothetical protein Kpol_365p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 294
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 164/273 (60%), Gaps = 39/273 (14%)
Query: 4 RTIENTREPDETVCRP---DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
+TIE+ R DET+ + D+D+L F+S KQ PKIL+TT + F
Sbjct: 57 KTIESMRVYDETINQAIEGDEDDLMKY-----FNSDSKQ--PPKILVTTNVNAKKKAYEF 109
Query: 61 ISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
+ L+ V+PN + KR Y LK+I+E K++FT +++++ ++++ L + LP+GP+
Sbjct: 110 ANVLIEVLPNVTFVKRKFGYKLKEIVEMCNKRNFTDLVIINEDKKKVTGLTFVHLPEGPS 169
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
+FK+S V + I HG T HIPEL+LNNF TRLG VGRL QS+FPQ+P+F GR+V+
Sbjct: 170 FYFKISSYVEVQKIVGHGRATSHIPELILNNFQTRLGKTVGRLFQSIFPQNPDFEGRQVI 229
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
T HNQRD+IFFR HRY+F+ +E G LQE GP+FT+K
Sbjct: 230 TLHNQRDYIFFRRHRYVFKNEERVG------------------------LQELGPQFTMK 265
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L LQ+G + E EW HKPEMD +++F+L
Sbjct: 266 LKRLQNGIKE----ETEWEHKPEMDKEKKQFYL 294
>gi|241997904|ref|XP_002433595.1| U3 small nucleolar ribonucleoprotein imp4, putative [Ixodes
scapularis]
gi|215495354|gb|EEC04995.1| U3 small nucleolar ribonucleoprotein imp4, putative [Ixodes
scapularis]
Length = 232
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 150/255 (58%), Gaps = 33/255 (12%)
Query: 27 GNDADEFSSILKQGCAP--------KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 78
+ ADE+ S+ K+ + + + R R F EL IP++ + R
Sbjct: 2 ADQADEYVSVHKRNISQIKNKKRRLEEYLKLKREKQKRTIKFCRELKQSIPDAEFRWRNR 61
Query: 79 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 138
+KK +E A ++ ++ I +++ +RR P+ LL+ LPDGPTA+F+LS + KDIK +
Sbjct: 62 SRIKKTVEQAVERGYSDIAIINEDRRHPNGLLLTHLPDGPTAYFRLSSVKFCKDIKKRAS 121
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFE 198
T H PE++LNNF TRLGH V R++ SLF P+F+GRRVVTFHNQRD+IFFRHHRY F
Sbjct: 122 YTAHRPEVILNNFNTRLGHSVARMLASLFHYDPQFQGRRVVTFHNQRDYIFFRHHRYEFR 181
Query: 199 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 258
E +QE GPRFTL+L SLQ GTFD+K GE+EWV
Sbjct: 182 NAER------------------------VNIQEIGPRFTLRLKSLQKGTFDSKFGEYEWV 217
Query: 259 HKP-EMDTSRRRFFL 272
K EM+TSRRRFFL
Sbjct: 218 LKRHEMETSRRRFFL 232
>gi|367014393|ref|XP_003681696.1| hypothetical protein TDEL_0E02420 [Torulaspora delbrueckii]
gi|359749357|emb|CCE92485.1| hypothetical protein TDEL_0E02420 [Torulaspora delbrueckii]
Length = 293
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE+ RE DETV + G++ D + PKIL+TT + F
Sbjct: 55 VPKTIESMREYDETVTQG-----IEGDEDDLMQYFNNKNEPPKILLTTNVNAKKKAYEFA 109
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ L+ ++PN + KR Y LK+I++ ++ FT +++++ ++++ L + LP+GP+
Sbjct: 110 NVLIEILPNVTFIKRKFGYKLKEIVDICNRRGFTDLVIINEDKKKVTGLTFMHLPEGPSF 169
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+FK+S V + I HG PT HIPEL+LNNF TRLG VGRL QS+FP++P+F GR+V+T
Sbjct: 170 YFKISSYVEVQKIVGHGRPTSHIPELILNNFQTRLGKTVGRLFQSIFPKNPDFEGRQVIT 229
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F +E G LQE GP+FTLKL
Sbjct: 230 LHNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFTLKL 265
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G + E EW H+PEMD +++F+L
Sbjct: 266 KRLQRGIKE----ETEWEHRPEMDKEKKKFYL 293
>gi|308798675|ref|XP_003074117.1| Ribosome biogenesis protein RPF1, contains IMP4 domain (ISS)
[Ostreococcus tauri]
gi|116000289|emb|CAL49969.1| Ribosome biogenesis protein RPF1, contains IMP4 domain (ISS)
[Ostreococcus tauri]
Length = 405
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 130/199 (65%), Gaps = 8/199 (4%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TIEN R D T D+E+ + DEF+S PKI++TT R S F+
Sbjct: 79 PKTIENQRVRDATHVEEGDEEVIEQDAEDEFASYFSHATEPKIIVTTSRKPSGAMFKFLE 138
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
L +VIPN++YY R +Y +++I++ + FT I+V + LL LP+GPT +
Sbjct: 139 NLFTVIPNAYYYARRSYHIQEIVKVRHARGFTDILV--------NGLLHCHLPEGPTCLY 190
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
KLS L L K+IK HG T H PEL+LNNF TRLGHRV R+ S+FPQ PEF+GRRVVTFH
Sbjct: 191 KLSSLQLSKEIKGHGRATSHYPELILNNFTTRLGHRVSRMFASVFPQRPEFKGRRVVTFH 250
Query: 183 NQRDFIFFRHHRYIFETKE 201
NQRDFIFFRHHRY+FE K+
Sbjct: 251 NQRDFIFFRHHRYVFEEKK 269
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Query: 225 VITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS---RRRFFL 272
+ RLQE GPRFTL+L+S+Q GTFD++ GE+E++ E D + RR+F L
Sbjct: 355 IQARLQELGPRFTLRLMSVQKGTFDSRHGEYEYIRSTETDGTRKNRRKFVL 405
>gi|367004120|ref|XP_003686793.1| hypothetical protein TPHA_0H01530 [Tetrapisispora phaffii CBS 4417]
gi|357525095|emb|CCE64359.1| hypothetical protein TPHA_0H01530 [Tetrapisispora phaffii CBS 4417]
Length = 294
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 157/272 (57%), Gaps = 39/272 (14%)
Query: 5 TIENTREPDETVCRP---DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
TIE+ R DET+ + D+DEL ++D PKIL+TT + F
Sbjct: 58 TIESMRVYDETITKDIEGDEDELMKFFNSD-------NNNPPKILVTTNVNAKKKAYEFA 110
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ L+ V+PN + KR LK + + +K+DFT I++++ ++++ L + LP+GPT
Sbjct: 111 NVLIEVLPNVTFVKRKFGIKLKDMADMCEKRDFTDIVIINEDKKKVTGLTFMHLPEGPTF 170
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+FKLS V I HG PT HIPEL+LNNF TRLG VGRL QS+FP++PEF GR+V+T
Sbjct: 171 YFKLSSYVEVTKITGHGRPTSHIPELILNNFQTRLGKTVGRLFQSIFPKNPEFEGRQVIT 230
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F +E G LQE GP+FTLKL
Sbjct: 231 LHNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFTLKL 266
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G + E EW HKPEMD +++F+L
Sbjct: 267 KRLQRGIKE----ETEWEHKPEMDKQKKQFYL 294
>gi|291000850|ref|XP_002682992.1| predicted protein [Naegleria gruberi]
gi|284096620|gb|EFC50248.1| predicted protein [Naegleria gruberi]
Length = 268
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 161/279 (57%), Gaps = 25/279 (8%)
Query: 6 IENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA------ 59
+E + DE V + + L D DEF K G PK+LITT ++N+ A
Sbjct: 1 LEYLKNFDEQVHKSKQETLAEEEDIDEFEEYFKNGKEPKVLITT-QYNAMLDKAKNASKF 59
Query: 60 ---FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
FI ELL+ IPNS Y KR Y +K++IEYA+K DFT +IV+ +P + L+I LP
Sbjct: 60 TMTFIKELLNCIPNSFYMKRKHYYVKQVIEYAEKNDFTDVIVIGERNNKPSSCLLIHLPT 119
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHI-----PELVLNNFATRLGHRVGRLIQSLFPQSP 171
GP A F+LS L+KD++N + PEL+LNNF TRLG+RV R+ Q++FPQ P
Sbjct: 120 GPCATFRLSFPKLKKDLRNIAKVDRNYCQKFYPELILNNFTTRLGYRVARMFQAIFPQKP 179
Query: 172 EFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 231
F GRRVVT HNQRDFIFFRHH Y F + K D +AK K ++QE
Sbjct: 180 NFTGRRVVTMHNQRDFIFFRHHIYNFYDVDEKNKD----RAKSVTVTKG------VKIQE 229
Query: 232 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
GPR T +L SLQ G FD GEFEW + E+ +++F
Sbjct: 230 VGPRVTFRLQSLQLGKFDNLFGEFEWYGRNELVVDKKQF 268
>gi|401625440|gb|EJS43449.1| rpf1p [Saccharomyces arboricola H-6]
Length = 295
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 158/276 (57%), Gaps = 45/276 (16%)
Query: 4 RTIENTREPDETVCRP---DDDEL---FAGNDADEFSSILKQGCAPKILITTCRFNSNRG 57
+TIENTR DET+ + D+D+L F GN + PKI +TT
Sbjct: 58 QTIENTRVYDETINKEVEGDEDDLMRYFNGNSNE----------PPKIFLTTNVNAKKSA 107
Query: 58 PAFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F + L+ V+PN + KR Y LK+I + K++FT I++++ ++++ L I LP+
Sbjct: 108 YEFANILIEVLPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPE 167
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPT +FKLS V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR
Sbjct: 168 GPTFYFKLSSFVEVKKIAGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGR 227
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
+VVT HNQRD+IFFR HRY+F+ E G LQE GP+F
Sbjct: 228 QVVTLHNQRDYIFFRRHRYVFKDNERVG------------------------LQELGPQF 263
Query: 237 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
TLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 264 TLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>gi|365984503|ref|XP_003669084.1| hypothetical protein NDAI_0C01800 [Naumovozyma dairenensis CBS 421]
gi|343767852|emb|CCD23841.1| hypothetical protein NDAI_0C01800 [Naumovozyma dairenensis CBS 421]
Length = 294
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 159/275 (57%), Gaps = 43/275 (15%)
Query: 4 RTIENTREPDETVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 58
+TI+N R DET+ +P D+D+L F N+ E PKI +TT
Sbjct: 57 KTIDNMRVFDETINQPIEGDEDDLLQFFNNNNSE---------PPKIFLTTNVNARKCAY 107
Query: 59 AFISELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F + L+ V+PN + KR Y +K+I++ K++FT +++++ ++++ L I LP+G
Sbjct: 108 EFANVLIEVLPNVTFVKRKYGYKMKEIVDICNKRNFTDMVIINEDKKKVTGLTFIHLPEG 167
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
P+ +FKLS V K I HG PT HIPEL+LNNF TRLG VG+L QS+FP PEF GR+
Sbjct: 168 PSFYFKLSSYVEVKKIVGHGRPTSHIPELILNNFQTRLGKTVGKLFQSIFPNDPEFEGRQ 227
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
V+T HNQRD+IFFR HRY+F +E G LQE GP+FT
Sbjct: 228 VITLHNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFT 263
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LKL LQ G + E EW HKPEMD +++F+L
Sbjct: 264 LKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 294
>gi|19114780|ref|NP_593868.1| Brix domain protein Rpf1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|3183322|sp|O14180.1|YDS4_SCHPO RecName: Full=Brix domain-containing protein C4F8.04
gi|2330821|emb|CAB11051.1| Brix domain protein Rpf1 (predicted) [Schizosaccharomyces pombe]
Length = 306
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 165/273 (60%), Gaps = 21/273 (7%)
Query: 3 PRTIENTREPDETVCRPD-DDELFAGNDADEFSSIL-KQGCAPKILITTCRFNSNRGPAF 60
P TIE+ R DET+ D+EL A DEFS+ ++ PK+L+TT + S + F
Sbjct: 52 PATIESKRVYDETIIEDKPDEELQAELKDDEFSAYFSEERKVPKLLVTTSKRASRKCYDF 111
Query: 61 ISELLSVIPNSHYYKR-GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
SELL PN+ + KR G ++ +I E A K+ +T ++V++ +R++ +AL ++ LP+GP+
Sbjct: 112 ASELLDCFPNAEFRKRTGDIEVHEIAEAAAKRGYTDLLVLNEDRKKTNALTLVHLPNGPS 171
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
+F LS L K+I NHG TGHIPEL++NNF+TRLG V R QSLF Q+P+ +GR+VV
Sbjct: 172 FYFTLSNLQTAKEISNHGRSTGHIPELIINNFSTRLGMTVARAFQSLFIQTPQIQGRQVV 231
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
T H QRDF+FFR HRY F K S D G T LQE GPRFT++
Sbjct: 232 TIHCQRDFLFFRRHRYAFREK-SNMPDGIG-----------------TGLQELGPRFTMR 273
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L +Q G +D K GE + ++ RR+F+L
Sbjct: 274 LRMVQKGVWDRKEGEVFFESNAGEESDRRKFWL 306
>gi|366996156|ref|XP_003677841.1| hypothetical protein NCAS_0H01830 [Naumovozyma castellii CBS 4309]
gi|342303711|emb|CCC71493.1| hypothetical protein NCAS_0H01830 [Naumovozyma castellii CBS 4309]
Length = 294
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 158/274 (57%), Gaps = 41/274 (14%)
Query: 4 RTIENTREPDETVCRP----DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA 59
+TI+N R DET+ + +DD + ND + G PKI +TT
Sbjct: 57 KTIDNMRVYDETIQKEVEGDEDDLMRFFND--------RNGEPPKIFLTTNVNARKCAYE 108
Query: 60 FISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
F + L+ V+PN + KR Y LK+I + K++FT +++++ ++++ L I LP+GP
Sbjct: 109 FANVLIEVLPNVTFVKRKFGYTLKEIADICNKRNFTDVVIINEDKKKVTGLTFIHLPEGP 168
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
+ +FKLS V K I HG PT H+PEL+LNNF TRLG VGRL QS+FPQ+PEF GR+V
Sbjct: 169 SFYFKLSSYVEVKKIVGHGRPTSHVPELILNNFQTRLGKTVGRLFQSIFPQNPEFEGRQV 228
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
+T HNQRD+IFFR HRY+F +E G LQE GP+FTL
Sbjct: 229 ITLHNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFTL 264
Query: 239 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
KL LQ G + E EW H+PEMD +++F+L
Sbjct: 265 KLKRLQRGIKE----ETEWEHRPEMDKEKKKFYL 294
>gi|401838442|gb|EJT42078.1| RPF1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 295
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 158/276 (57%), Gaps = 45/276 (16%)
Query: 4 RTIENTREPDETVCRP---DDDEL---FAGNDADEFSSILKQGCAPKILITTCRFNSNRG 57
+TIENTR DET+ + D+D+L F GN + PKI +TT
Sbjct: 58 QTIENTRVYDETINKEVEGDEDDLMKYFNGNSNE----------PPKIFLTTNVNAKKSA 107
Query: 58 PAFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F + ++ V+PN + KR Y LK+I + K++FT I++++ ++++ L I LP+
Sbjct: 108 YEFANIMIEVLPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPE 167
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPT +FKLS V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR
Sbjct: 168 GPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGR 227
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
+V+T HNQRD+IFFR HRY+F+ E G LQE GP+F
Sbjct: 228 QVITLHNQRDYIFFRRHRYVFKDNERVG------------------------LQELGPQF 263
Query: 237 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
TLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 264 TLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>gi|430813396|emb|CCJ29275.1| unnamed protein product [Pneumocystis jirovecii]
Length = 306
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 162/271 (59%), Gaps = 25/271 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P TIE+ RE ++ V + +++E+ D + F SI PK LITT + S + +F
Sbjct: 59 PHTIESKREANKNVFQEENEEIERKLDEETFESINDPKYIPKTLITTSKRPSKQTYSFAR 118
Query: 63 ELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
EL+ + P+S + KRG +++ KI Y K+ ++++I V+ NR+ PD+L +I LP GP+ +
Sbjct: 119 ELIDLFPHSTFIKRGVQFEIDKIAMYCAKRGYSNLIFVNENRKMPDSLTVIHLPSGPSFY 178
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F LS + + I HG T HIPEL+++NF T+LG VGR+ +SLFP P+F GR+VVT
Sbjct: 179 FTLSSITPIRCIYQHGRATSHIPELIISNFTTKLGLVVGRMFRSLFPAQPDFEGRQVVTI 238
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRDFIF R HRYIF+ + G LQE GP+FTL+L
Sbjct: 239 HNQRDFIFVRRHRYIFKNEMKVG------------------------LQELGPQFTLRLR 274
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+Q G +D G + + +KP +++RRRF+L
Sbjct: 275 LMQRGIYDKDGNDIIFKNKPGEESNRRRFWL 305
>gi|254577365|ref|XP_002494669.1| ZYRO0A06930p [Zygosaccharomyces rouxii]
gi|238937558|emb|CAR25736.1| ZYRO0A06930p [Zygosaccharomyces rouxii]
Length = 293
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE R DET+ + D+ ++ D G PKIL+TT F
Sbjct: 55 VPKTIEGMRVYDETIGQKDE-----ADEEDLMQLFNNNGEPPKILLTTSINAKRNAYEFA 109
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ L+ + PN + KR +K I+E + K++FT II+++ ++++ L + LP+GP+
Sbjct: 110 NVLIEIFPNVTFVKRKFGLTMKDIVEASSKRNFTDIIIINEDKKKVTGLTFMHLPEGPSF 169
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+FK+S V K I HG PT HIPEL+LNNF+TRLG VG L QS+FP++P+F GR+V+T
Sbjct: 170 YFKVSSYVDVKKIVGHGRPTSHIPELILNNFSTRLGKTVGTLFQSIFPKNPDFEGRQVIT 229
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+FE ++ G LQE GP+FTLKL
Sbjct: 230 LHNQRDYIFFRRHRYVFENEKKVG------------------------LQELGPQFTLKL 265
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G + E EW ++PEMD +++F+L
Sbjct: 266 RRLQRGIKE----ETEWEYRPEMDKEKKKFYL 293
>gi|388579465|gb|EIM19788.1| Brix-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 359
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 167/333 (50%), Gaps = 89/333 (26%)
Query: 3 PRTIENTREPDETV--CRP------------------------DDDELFAGNDADEFSSI 36
P T++NTRE D T+ +P DD EL + D F++
Sbjct: 53 PNTLDNTREFDATIPQAQPVTQDNDQSQEEQPDNGGTSDALGTDDPELASDIANDAFATY 112
Query: 37 LKQGCA-----------PKILITTCRFNSNRGPAFISELLSVIPNSHYYKR---GTYDLK 82
PKILITT F +L SV+PNS Y KR Y++
Sbjct: 113 FTPQLVNPDDPNSPIKLPKILITTSVGAGKNSIEFCMDLTSVLPNSEYVKRRGGKGYEIA 172
Query: 83 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 142
I +AKK+D+T ++V++ + + P+A+ ++ LP GPTA+FKLS + L K I H PT H
Sbjct: 173 TIAGWAKKRDYTDMMVINEDHKTPNAITLMHLPYGPTAYFKLSSVKLSKAITGHARPTPH 232
Query: 143 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKES 202
PELVLNNFATRLGH VGR+ Q+LFP PEF GR+V TFH QRDFIFFR HRY F++ E
Sbjct: 233 HPELVLNNFATRLGHTVGRMFQALFPPVPEFEGRQVATFHVQRDFIFFRRHRYAFKSTEK 292
Query: 203 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK----------- 251
T LQE GPRFTLKL ++ G K
Sbjct: 293 ------------------------TALQEIGPRFTLKLRWMKRGLPSIKYEVDNRPTEAR 328
Query: 252 ------------GGEFEWVHKPEMDTSRRRFFL 272
G EF+W KPE++TSRR+FFL
Sbjct: 329 LANAADNDNGNDGFEFQW--KPELETSRRKFFL 359
>gi|323308831|gb|EGA62068.1| Rpf1p [Saccharomyces cerevisiae FostersO]
Length = 295
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 160/275 (58%), Gaps = 43/275 (15%)
Query: 4 RTIENTREPDETVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 58
+TIENTR DET+ + D+D+L + ++++E PKI +TT
Sbjct: 58 QTIENTRVYDETINKEVEGDEDDLMRYFNSNSNE---------PPKIFLTTNVNAKKSAY 108
Query: 59 AFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F + L+ ++PN + KR Y LK+I + K++FT I++++ ++++ L I LP+G
Sbjct: 109 EFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEG 168
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
PT +FKLS V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR+
Sbjct: 169 PTFYFKLSSFVEVKKIVGHGGPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQ 228
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
V+T HNQRD+IFFR HRY+F+ E G LQE GP+FT
Sbjct: 229 VITLHNQRDYIFFRRHRYVFKDNERVG------------------------LQELGPQFT 264
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LKL LQ G + E EW HKPEMD +++F+L
Sbjct: 265 LKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>gi|6321880|ref|NP_011956.1| Rpf1p [Saccharomyces cerevisiae S288c]
gi|731684|sp|P38805.1|RPF1_YEAST RecName: Full=Ribosome production factor 1; AltName: Full=Ribosome
biogenesis protein RPF1
gi|487932|gb|AAB68926.1| Yhr088wp [Saccharomyces cerevisiae]
gi|151944036|gb|EDN62329.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405870|gb|EDV09137.1| ribosome production factor 1 [Saccharomyces cerevisiae RM11-1a]
gi|207344657|gb|EDZ71727.1| YHR088Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269443|gb|EEU04738.1| Rpf1p [Saccharomyces cerevisiae JAY291]
gi|259146843|emb|CAY80099.1| Rpf1p [Saccharomyces cerevisiae EC1118]
gi|285809997|tpg|DAA06784.1| TPA: Rpf1p [Saccharomyces cerevisiae S288c]
gi|323304586|gb|EGA58349.1| Rpf1p [Saccharomyces cerevisiae FostersB]
gi|323337304|gb|EGA78557.1| Rpf1p [Saccharomyces cerevisiae Vin13]
gi|323354649|gb|EGA86484.1| Rpf1p [Saccharomyces cerevisiae VL3]
gi|349578641|dbj|GAA23806.1| K7_Rpf1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765200|gb|EHN06712.1| Rpf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298895|gb|EIW09990.1| Rpf1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 295
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 160/275 (58%), Gaps = 43/275 (15%)
Query: 4 RTIENTREPDETVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 58
+TIENTR DET+ + D+D+L + ++++E PKI +TT
Sbjct: 58 QTIENTRVYDETINKEVEGDEDDLMRYFNSNSNE---------PPKIFLTTNVNAKKSAY 108
Query: 59 AFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F + L+ ++PN + KR Y LK+I + K++FT I++++ ++++ L I LP+G
Sbjct: 109 EFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEG 168
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
PT +FKLS V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR+
Sbjct: 169 PTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQ 228
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
V+T HNQRD+IFFR HRY+F+ E G LQE GP+FT
Sbjct: 229 VITLHNQRDYIFFRRHRYVFKDNERVG------------------------LQELGPQFT 264
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LKL LQ G + E EW HKPEMD +++F+L
Sbjct: 265 LKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>gi|215259915|gb|ACJ64449.1| ribosome production factor 1 [Culex tarsalis]
Length = 226
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 152/247 (61%), Gaps = 26/247 (10%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
+ DE + + PK+LIT +R F +EL ++PNS + R LKK+ + A
Sbjct: 3 EHDEINEYYSKSYEPKVLITYNATPHSRTRRFGAELERILPNSMVHSRNKATLKKVCQSA 62
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNPTGHIPELV 147
+++FT ++V++ N ++P+ +L+I LPDGPTAHFK+S +D+K G T H PE++
Sbjct: 63 VREEFTDLVVINENNKQPEGMLVIHLPDGPTAHFKISNYKSLRDLKKRRGMITSHRPEVI 122
Query: 148 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDA 207
L NF TRLG +GR++ +LF PEF+GRRV TFHNQRD+IFFRHH Y F D
Sbjct: 123 LTNFTTRLGLTIGRMLGALFHYDPEFKGRRVATFHNQRDYIFFRHHLYEF--------DK 174
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV--HKPEMDT 265
NGK+ K L+E GPRFTLKL SLQ G FD+K G++EW+ +K +
Sbjct: 175 NGKRVK---------------LRELGPRFTLKLRSLQTGLFDSKCGDYEWMITNKRHLME 219
Query: 266 SRRRFFL 272
SRRRFFL
Sbjct: 220 SRRRFFL 226
>gi|260941712|ref|XP_002615022.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851445|gb|EEQ40909.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 298
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 154/273 (56%), Gaps = 37/273 (13%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAF 60
P TIE+ R DET+ DE+ DEF + + PK+L+TT F
Sbjct: 61 VPETIESKRVYDETIA----DEV---EGEDEFFELFNRTQRDPKVLLTTNAGAKKNAYEF 113
Query: 61 ISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
L+ +PN + KR Y +K + +Y +DFT +IV++ ++++ + L I LP+GPT
Sbjct: 114 ADILMEFVPNVTFVKRKREYSMKDMAQYCTNRDFTDLIVINEDKKKVNGLTFIHLPEGPT 173
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
+F +S LV + IK HG T HIPEL+LNNF TRLG VGRL Q++FP PE +GR+V+
Sbjct: 174 FYFSVSSLVTTERIKGHGRATSHIPELILNNFNTRLGKTVGRLFQAIFPAQPEIQGRQVL 233
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
T HNQRD+IFFR HRY+F +E G LQE GP+FTLK
Sbjct: 234 TLHNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFTLK 269
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L LQ G D E EW H+P+M+ +R+F+L
Sbjct: 270 LRRLQKGIKD----EVEWEHRPDMERDKRKFYL 298
>gi|58392102|ref|XP_319105.2| AGAP009968-PA [Anopheles gambiae str. PEST]
gi|55236189|gb|EAA14330.2| AGAP009968-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 157/259 (60%), Gaps = 32/259 (12%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA---FISELLSVIPNSHYYKR 76
D E+ DEF ++ P+++IT FN+ F S L +IPN+ ++R
Sbjct: 5 DQAEVMNDLANDEFCEYYQKSYEPRVMIT---FNATPHMVTRKFASLLRRMIPNAKTFRR 61
Query: 77 GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK-N 135
LK++ + A ++++T I+VV+ NR++P+ LL+I LPDGPTAHFK+S KD+K N
Sbjct: 62 NKTQLKRVCKSAIRENYTDILVVNENRKKPEGLLLIHLPDGPTAHFKVSNFKDLKDLKRN 121
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
+ T H PE++LNNF TRLG +GR++ +LF PEFRGRR VTFHNQRD+IFFRHH Y
Sbjct: 122 ERDITTHRPEVILNNFTTRLGLTIGRMLGALFHYEPEFRGRRAVTFHNQRDYIFFRHHLY 181
Query: 196 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 255
F D NGK+ K L+E GPRFTLKL SLQ G FD K G++
Sbjct: 182 EF--------DKNGKRVK---------------LRELGPRFTLKLRSLQVGLFDGKCGDY 218
Query: 256 EWV--HKPEMDTSRRRFFL 272
EW+ +K SRRRFFL
Sbjct: 219 EWMITNKRHQMESRRRFFL 237
>gi|444322686|ref|XP_004181984.1| hypothetical protein TBLA_0H01780 [Tetrapisispora blattae CBS 6284]
gi|387515030|emb|CCH62465.1| hypothetical protein TBLA_0H01780 [Tetrapisispora blattae CBS 6284]
Length = 293
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 161/276 (58%), Gaps = 42/276 (15%)
Query: 2 TPRTIENTREPDETVCRP---DDDELFAG-NDADEFSSILKQGCAPKILITTCRFNSNRG 57
P TI++ R DET+ + D+D+L ND+ E PKIL+TT
Sbjct: 55 VPNTIDSMRTYDETINQEIEGDEDDLMKYFNDSKE---------PPKILLTTNVNARKIA 105
Query: 58 PAFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F + L+ ++PN + KR + +K+I + A K+ FT I++++ ++++ L + LP+
Sbjct: 106 YEFANVLIEILPNVTFVKRKFGFTMKEISDIANKRHFTDIVIINEDKKKVTGLTFMHLPE 165
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GP+ +FK+S V K I HG PT H+PEL+LNNF TRLG VGRL QS+FPQ+P+F GR
Sbjct: 166 GPSFYFKVSSYVEVKKIVGHGRPTSHVPELILNNFQTRLGKTVGRLFQSIFPQNPDFEGR 225
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
+V+T HNQRD+IFFR HRY+F+ +E G LQE GP+F
Sbjct: 226 QVITLHNQRDYIFFRRHRYLFKNEEKVG------------------------LQELGPQF 261
Query: 237 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
TLKL LQ G + E EW HKPEMD +++F+L
Sbjct: 262 TLKLRRLQRGIKE----ETEWEHKPEMDKEKKKFYL 293
>gi|323333249|gb|EGA74647.1| Rpf1p [Saccharomyces cerevisiae AWRI796]
gi|323348253|gb|EGA82502.1| Rpf1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 263
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 160/275 (58%), Gaps = 43/275 (15%)
Query: 4 RTIENTREPDETVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 58
+TIENTR DET+ + D+D+L + ++++E PKI +TT
Sbjct: 26 QTIENTRVYDETINKEVEGDEDDLMRYFNSNSNE---------PPKIFLTTNVNAKKSAY 76
Query: 59 AFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F + L+ ++PN + KR Y LK+I + K++FT I++++ ++++ L I LP+G
Sbjct: 77 EFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEG 136
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
PT +FKLS V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR+
Sbjct: 137 PTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQ 196
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
V+T HNQRD+IFFR HRY+F+ E G LQE GP+FT
Sbjct: 197 VITLHNQRDYIFFRRHRYVFKDNERVG------------------------LQELGPQFT 232
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LKL LQ G + E EW HKPEMD +++F+L
Sbjct: 233 LKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 263
>gi|403214375|emb|CCK68876.1| hypothetical protein KNAG_0B04420 [Kazachstania naganishii CBS
8797]
Length = 295
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 157/278 (56%), Gaps = 44/278 (15%)
Query: 2 TPRTIENTREPDETV---CRPDDDEL---FAGNDADEFSSILKQGCAPKILITTCRFNSN 55
P+TI++ RE DET+ D+D+L F N+ D PKI +TT
Sbjct: 55 VPQTIDSKREYDETIGAEVEDDEDDLMRHFNSNNKD---------MPPKIFLTTNVNARK 105
Query: 56 RGPAFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 114
F + L+ V+PN + KR Y LK+I E K++FT ++V++ ++++ L + L
Sbjct: 106 CAYEFANVLIEVLPNVTFVKRKFGYKLKEIAEMCIKRNFTDMVVINEDKKKVTGLTFMHL 165
Query: 115 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
PDGPT +FKLS V + HG T HIPEL+LNNF TRLG VGRL QS+FPQ P+F
Sbjct: 166 PDGPTFYFKLSSYVEVLKVHGHGRATSHIPELILNNFQTRLGKTVGRLFQSIFPQDPDFE 225
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GR+V+T HNQRD+IFFR HRYIF+ +E G LQE GP
Sbjct: 226 GRQVITLHNQRDYIFFRRHRYIFKDEEKVG------------------------LQELGP 261
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+FTLKL +Q G + E EW HKPEMD +++F L
Sbjct: 262 QFTLKLKRIQRGLRE----ETEWEHKPEMDKDKKKFHL 295
>gi|146415746|ref|XP_001483843.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
gi|146392316|gb|EDK40474.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 292
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 157/271 (57%), Gaps = 36/271 (13%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P T+E+ R DETV + +DEF + PK++ITT + F
Sbjct: 57 PETLESKRVYDETVGAEIEG-------SDEFQKYFENPRDPKVMITTNANAKKQAYEFAD 109
Query: 63 ELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
++ +PNS + KR Y++K++ ++ +++T ++V++ ++++ + L I+ LP+GP+ +
Sbjct: 110 IMMDFLPNSTFVKRKKAYNMKEMAKFCSNREYTDLVVINEDKKKVNGLTIMHLPEGPSFY 169
Query: 122 FKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
F ++ LV K I+ HG T HIPELVLNNF TRLG VGRL QS+FP PE +GR+VVT
Sbjct: 170 FSVTSLVDTKRIEGHGRATDHIPELVLNNFNTRLGKTVGRLFQSMFPHRPEIQGRQVVTL 229
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRY+F +E G LQE GP+FTLKL
Sbjct: 230 HNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFTLKLR 265
Query: 242 SLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G D E EW H+P+M+ +R+F+L
Sbjct: 266 RLQRGIKD----EVEWEHRPDMERDKRKFYL 292
>gi|50312031|ref|XP_456047.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645183|emb|CAG98755.1| KLLA0F21670p [Kluyveromyces lactis]
Length = 292
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 35/272 (12%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TI+N R DET+ + + E+ D+F PKIL+TT + F
Sbjct: 55 VPDTIDNLRVYDETMGQEVEGEM------DDFMKFFNGTEPPKILLTTNVNAKKKAYEFA 108
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ L+ V PN + KR Y LK+I E+ +++T I++++ ++++ L I LP+GPT
Sbjct: 109 NILIEVFPNVTFVKRKFGYKLKEISEFCNNRNYTDIVIINEDKKKVTGLTFIHLPEGPTF 168
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+FK+S V + I HG PT HIPEL+LNNF TRLG VG+L QS+FP++P+F GR+V+T
Sbjct: 169 YFKISSFVEVEKIVGHGRPTSHIPELILNNFNTRLGKTVGKLFQSIFPKNPDFEGRQVIT 228
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F +E G LQE GP+FT+KL
Sbjct: 229 LHNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFTMKL 264
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G + E EW HKP MD +++F L
Sbjct: 265 KRLQRGIKE----ETEWEHKPSMDKEKKKFNL 292
>gi|410079372|ref|XP_003957267.1| hypothetical protein KAFR_0D04850 [Kazachstania africana CBS 2517]
gi|372463852|emb|CCF58132.1| hypothetical protein KAFR_0D04850 [Kazachstania africana CBS 2517]
Length = 295
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 156/272 (57%), Gaps = 36/272 (13%)
Query: 4 RTIENTREPDETVCRPDDDELFAGNDAD--EFSSILKQGCAPKILITTCRFNSNRGPAFI 61
+TI++ R DET+ E G++ D +F + PKI +TT F
Sbjct: 57 QTIDSMRVYDETI-----KEAIEGDEDDLMKFFNNRNSNQPPKIFLTTNVNAKKAAYEFA 111
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ L+ V+PN + KR Y LK+I + K+DFT +++++ ++++ L + LP+GP+
Sbjct: 112 NVLIEVLPNVTFVKRKFGYKLKEIADMCIKRDFTDMVIINEDKKKVTGLTFMHLPEGPSF 171
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+FKLS V K I HG PT HIPEL+LNNF TRLG VGRL QS+FPQ+PEF GR+V+T
Sbjct: 172 YFKLSSYVEVKKIVGHGRPTSHIPELILNNFQTRLGKTVGRLFQSIFPQNPEFEGRQVIT 231
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F +E G LQE GP+FTLKL
Sbjct: 232 LHNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFTLKL 267
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G + E EW H+PEMD +++F L
Sbjct: 268 KRLQRGLKE----ETEWEHRPEMDKEKKKFHL 295
>gi|294659883|ref|XP_002770660.1| DEHA2G17688p [Debaryomyces hansenii CBS767]
gi|199434306|emb|CAR65993.1| DEHA2G17688p [Debaryomyces hansenii CBS767]
Length = 293
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 156/274 (56%), Gaps = 42/274 (15%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSN-RGPA-- 59
P TIE+ R DET+ + + E DEF PKIL+TT N+N + PA
Sbjct: 58 PETIESKRVFDETITQEVEGE-------DEFDQYFASSQEPKILLTT---NANAKKPAYE 107
Query: 60 FISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
F L+ +PN + KR + ++ + ++ K +D+T ++V++ +++ L I LP+GP
Sbjct: 108 FADLLMDFLPNVTFVKRKREFSMQDMAKFCKNRDYTDLVVINEDKKVVTGLTFIHLPEGP 167
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
T +F ++ L K I HG T HIPEL+LNNF TRLG VGRL QSLFP PEF+GR+V
Sbjct: 168 TFYFSVTSLTEGKKIAGHGRATDHIPELILNNFNTRLGKTVGRLFQSLFPHKPEFQGRQV 227
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
+T HNQRD+IFFR HRYIF +E G LQE GP+FTL
Sbjct: 228 ITLHNQRDYIFFRRHRYIFRNEEKVG------------------------LQELGPQFTL 263
Query: 239 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
KL LQ G D + EW H+P+M+ +R+F+L
Sbjct: 264 KLRRLQKGIKD----DVEWEHRPDMERDKRKFYL 293
>gi|255714697|ref|XP_002553630.1| KLTH0E03410p [Lachancea thermotolerans]
gi|238935012|emb|CAR23193.1| KLTH0E03410p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 160/270 (59%), Gaps = 36/270 (13%)
Query: 5 TIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAP-KILITTCRFNSNRGPAFISE 63
TI++ R DET+ + G++AD F+ G P KIL+TT + F +
Sbjct: 58 TIDSLRVYDETIHQE-----VEGDEAD-FAQFFNNGTEPPKILLTTNVNAKKKAYEFANV 111
Query: 64 LLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
L+ ++PN + KR Y LK+I+E+ +++T +++++ ++++ L I LP+GP+ +F
Sbjct: 112 LIEILPNVTFVKRKFGYKLKEIVEFCSNRNYTDLVIINEDKKKVTGLTFIHLPEGPSFYF 171
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K+S V + I HG T HIPEL+LNNF TRLG+ VGRL QS+FP++P+F GR+V+T H
Sbjct: 172 KISSYVDVQKIVGHGRATSHIPELILNNFQTRLGNTVGRLFQSIFPKNPDFEGRQVITLH 231
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRD+IFFR HRY+F +E G LQE GP+FT+KL+
Sbjct: 232 NQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFTMKLLR 267
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQHG + E EW H +MD +++F+L
Sbjct: 268 LQHGIKE----ETEWEHTADMDKEKKKFYL 293
>gi|401424267|ref|XP_003876619.1| putative RNA processing factor 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492862|emb|CBZ28140.1| putative RNA processing factor 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 330
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAF 60
TP+T E R D T+ +D ++AD EF++ + PK LITT R
Sbjct: 83 TPKTKERKRRVDATIIEDKEDAEIINDEADDEFAAFFRDRKTPKTLITTGEHPCFRTKQL 142
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ ELL ++PNS Y R +Y LK+I + ++FT ++VV +EP L++ LP+GPTA
Sbjct: 143 VKELLWLVPNSIYRPRKSYTLKEITLFCCNREFTDLLVVTDRIKEPHNLIVSHLPEGPTA 202
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V T
Sbjct: 203 TFRVSNFLSYAQLEDPAPRTEHYPELIFKNFDTRLGRRISRMLECLFPATRDYAGRAVAT 262
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IF R HRYIF+ E+ RLQE GPRFTL+L
Sbjct: 263 FHNQRDYIFLRTHRYIFDGLEA------------------------VRLQEMGPRFTLRL 298
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SLQ GTFD + GE+EW K E D +++
Sbjct: 299 LSLQSGTFDRQFGEYEWYRKKEHDADTLEWYM 330
>gi|126135862|ref|XP_001384455.1| hypothetical protein PICST_59404 [Scheffersomyces stipitis CBS
6054]
gi|126091653|gb|ABN66426.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 295
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 152/272 (55%), Gaps = 36/272 (13%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TI++ R DET+ + E DEF G PKIL+TT F
Sbjct: 59 VPETIDSKRVFDETIAAEVEGE-------DEFQQYFNSGIEPKILLTTSEEAKKPAYEFA 111
Query: 62 SELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
++ +PN + KR Y +K+I ++A +++T ++V++ ++++ + +I LP+GPT
Sbjct: 112 DMVMDFLPNVTFIKRKKEYSMKEIAKHAASREYTDLLVINEDKKKVTGITMIHLPEGPTF 171
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F ++ +V K IK HG + HIPELVLNNF TR+G VGR+ Q++FP SPE R+VVT
Sbjct: 172 YFSITSIVEGKQIKGHGRASEHIPELVLNNFNTRMGKTVGRMFQTMFPHSPEIVARQVVT 231
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRYIF +E G LQE GP+FTLKL
Sbjct: 232 LHNQRDYIFFRRHRYIFRNEEKVG------------------------LQELGPQFTLKL 267
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+Q G GE W H+P+M+ +R+F+L
Sbjct: 268 RRMQKGI----RGETVWEHRPDMERDKRKFYL 295
>gi|146090694|ref|XP_001466314.1| putative RNA processing factor 1 [Leishmania infantum JPCM5]
gi|134070676|emb|CAM69026.1| putative RNA processing factor 1 [Leishmania infantum JPCM5]
Length = 330
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAF 60
TP+T E R D T+ +D ++AD EF++ + PK LITT R
Sbjct: 83 TPKTKERKRRADVTIVENKEDAEIINDEADDEFAAFFRDRKNPKTLITTGEHPCFRTKQL 142
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ ELL ++PNS Y R +Y LK+I + ++FT ++VV +EP L++ LP+GPTA
Sbjct: 143 VKELLWLVPNSIYRPRKSYTLKEITLFCCNREFTDLLVVTDRIKEPYNLIVSHLPEGPTA 202
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V T
Sbjct: 203 TFRVSNFLSYTQLEDPAPRTEHYPELIFKNFDTRLGRRISRMLECLFPATRDYAGRAVAT 262
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IF R HRYIF+ E+ RLQE GPRFTL+L
Sbjct: 263 FHNQRDYIFLRTHRYIFDGLEA------------------------VRLQEMGPRFTLRL 298
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SLQ GTFD + GE+EW K E D +++
Sbjct: 299 LSLQSGTFDRQFGEYEWYRKKEHDADTLEWYM 330
>gi|398017432|ref|XP_003861903.1| RNA processing factor 1, putative [Leishmania donovani]
gi|322500131|emb|CBZ35206.1| RNA processing factor 1, putative [Leishmania donovani]
Length = 330
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAF 60
TP+T E R D T+ +D ++AD EF++ + PK LITT R
Sbjct: 83 TPKTKERKRRADVTIIENKEDAEIINDEADDEFAAFFRDRKNPKTLITTGEHPCFRTKQL 142
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ ELL ++PNS Y R +Y LK+I + ++FT ++VV +EP L++ LP+GPTA
Sbjct: 143 VKELLWLVPNSIYRPRKSYTLKEITLFCCNREFTDLLVVTDRIKEPYNLIVSHLPEGPTA 202
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V T
Sbjct: 203 TFRVSNFLSYTQLEDPAPRTEHYPELIFKNFDTRLGRRISRMLECLFPATRDYAGRAVAT 262
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IF R HRYIF+ E+ RLQE GPRFTL+L
Sbjct: 263 FHNQRDYIFLRTHRYIFDGLEA------------------------VRLQEMGPRFTLRL 298
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SLQ GTFD + GE+EW K E D +++
Sbjct: 299 LSLQSGTFDRQFGEYEWYRKKEHDADTLEWYM 330
>gi|389593195|ref|XP_003721851.1| ribosome biogenesis protein [Leishmania major strain Friedlin]
gi|321438353|emb|CBZ12105.1| ribosome biogenesis protein [Leishmania major strain Friedlin]
Length = 330
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAF 60
TP+T E R D T+ +D ++AD EF++ + PK LITT R
Sbjct: 83 TPKTKERKRRVDVTIIENKEDAEIINDEADDEFAAFFRDRKNPKTLITTGEHPCFRTKQL 142
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ ELL ++PNS Y R +Y LK+I + ++FT ++VV +EP L++ LP+GPTA
Sbjct: 143 VKELLWLVPNSIYRPRKSYTLKEITLFCCNREFTDLLVVTDRIKEPYNLIVSHLPEGPTA 202
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V T
Sbjct: 203 TFRVSNFLSHAQLEDPAPRTEHYPELIFKNFDTRLGRRISRMLECLFPATRDYAGRAVAT 262
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD+IF R HRYIF+ E+ RLQE GPRFTL+L
Sbjct: 263 FHNQRDYIFLRTHRYIFDGLEA------------------------VRLQEMGPRFTLRL 298
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SLQ GTFD + GE+EW K E D +++
Sbjct: 299 LSLQSGTFDRQFGEYEWYRKKEHDADTLEWYM 330
>gi|363755824|ref|XP_003648128.1| hypothetical protein Ecym_8015 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891328|gb|AET41311.1| Hypothetical protein Ecym_8015 [Eremothecium cymbalariae
DBVPG#7215]
Length = 292
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 153/272 (56%), Gaps = 35/272 (12%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI++ R DET+ + + D D+ + PKIL+TT + F
Sbjct: 55 VPKTIDSMRVYDETIGQEIE------GDKDDLMKVFNSNEPPKILLTTNVNAKKKAYEFA 108
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ L+ + PN + KR Y LK+I+ + +++T +++++ ++++ L + LP GPT
Sbjct: 109 NVLIEIFPNVTFVKRQFGYTLKEIVGFCNNRNYTDLVIINEDKKKVTGLTFVHLPAGPTF 168
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+FK+S + + I HG PT HIPEL+LNNF TRLG VG L QS+FPQ P+F GR+V+T
Sbjct: 169 YFKVSSYLEVEKIVGHGRPTSHIPELILNNFNTRLGKTVGTLFQSIFPQKPDFEGRQVIT 228
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F + G LQE GP+FTLKL
Sbjct: 229 LHNQRDYIFFRRHRYVFRNEVKVG------------------------LQELGPQFTLKL 264
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G + E EW HKP+MD +++F+L
Sbjct: 265 KRLQKGIKE----ETEWEHKPDMDKEKKKFYL 292
>gi|50288911|ref|XP_446885.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526194|emb|CAG59818.1| unnamed protein product [Candida glabrata]
Length = 294
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 160/275 (58%), Gaps = 43/275 (15%)
Query: 4 RTIENTREPDETVCRP---DDDEL--FAGNDADEFSSILKQGCAPKILITTCRFNSNRGP 58
+TI+N R DET+ + D+D+L F + ++E PKIL+TT
Sbjct: 57 KTIDNMRVYDETIGKEIEGDEDDLMKFFNSSSNE---------PPKILLTTNVNAKKSAY 107
Query: 59 AFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F + L+ ++PN + KR LK++ + K++FT I++++ N+++ L + LP+G
Sbjct: 108 EFANILIEILPNVTFIKRKFGITLKEMTDICIKRNFTDIVIINENKKKVTGLTFMHLPEG 167
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
P+ +FK+S V K I HG PT HIPEL+LNNF TRLG VGRL QS+FP++P+F GR+
Sbjct: 168 PSFYFKISSFVEVKKIVGHGKPTSHIPELILNNFQTRLGKTVGRLFQSIFPKNPDFEGRQ 227
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
V+T HNQRD+IFFR HRY+F +E G LQE GP+FT
Sbjct: 228 VITLHNQRDYIFFRRHRYVFRNEEKVG------------------------LQELGPQFT 263
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+KL +Q G + E EW H+PEMD +++F+L
Sbjct: 264 MKLRRVQRGIKE----ETEWEHRPEMDKEKKKFYL 294
>gi|344305240|gb|EGW35472.1| hypothetical protein SPAPADRAFT_131696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 298
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 152/272 (55%), Gaps = 35/272 (12%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQ-GCAPKILITTCRFNSNRGPAFI 61
P T++N R DET+ G D DEF G PKIL+TT F
Sbjct: 60 PDTLDNKRVFDETIGVE-----VEGEDQDEFQQYFTNLGSEPKILLTTSENAKKPAYEFA 114
Query: 62 SELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
L+ +PN+ + KR Y +K+I ++A +++T ++V++ ++++ + I LP+GPT
Sbjct: 115 DMLMDFLPNTTFIKRKKEYSMKEIAKFASNREYTDLLVINEDKKKVTGITFIHLPEGPTF 174
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F ++ +V K IK HG T HIPELVLNNF +RLG VGRL QS+FP PE +GR+V+T
Sbjct: 175 YFSITSIVDGKRIKGHGRATDHIPELVLNNFNSRLGKTVGRLFQSIFPHQPEIQGRQVIT 234
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IF R HRYIF +E G LQE GP+FTLKL
Sbjct: 235 LHNQRDYIFVRRHRYIFRNEEKVG------------------------LQELGPQFTLKL 270
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G G+ W H+P+M+ +++F+L
Sbjct: 271 RRLQKGV----RGDVIWEHRPDMERDKKKFYL 298
>gi|448105556|ref|XP_004200524.1| Piso0_003114 [Millerozyma farinosa CBS 7064]
gi|448108678|ref|XP_004201155.1| Piso0_003114 [Millerozyma farinosa CBS 7064]
gi|359381946|emb|CCE80783.1| Piso0_003114 [Millerozyma farinosa CBS 7064]
gi|359382711|emb|CCE80018.1| Piso0_003114 [Millerozyma farinosa CBS 7064]
Length = 293
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 141/241 (58%), Gaps = 29/241 (12%)
Query: 33 FSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKK 91
FS+ K PKIL+TT F L+ ++PN+ + KR Y++K+I +
Sbjct: 81 FSACFKDAKDPKILLTTNANARKAAYEFADILMEILPNTTFVKRKREYNMKEIAQSCIAH 140
Query: 92 DFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 151
++T ++V++ ++++ + L + LPDGPT +F +S LVL K I HG T HIPELVLNNF
Sbjct: 141 EYTDLVVINEDKKKVNGLTFVHLPDGPTFYFSISSLVLSKKIPGHGRATDHIPELVLNNF 200
Query: 152 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKK 211
+T+LG VG L Q+LFP+ PEF GR+VVT HNQRD+IFFR HRYIF +E G
Sbjct: 201 STKLGKSVGTLFQALFPRKPEFEGRQVVTLHNQRDYIFFRRHRYIFRNEERVG------- 253
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFF 271
LQE GP+FTL+L +Q G E W HKP+MD +R+F+
Sbjct: 254 -----------------LQELGPQFTLRLRRVQKGI----RNEVAWEHKPDMDRDKRKFY 292
Query: 272 L 272
L
Sbjct: 293 L 293
>gi|154339712|ref|XP_001565813.1| ribosome biogenesis protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063131|emb|CAM45331.1| ribosome biogenesis protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 330
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 154/272 (56%), Gaps = 25/272 (9%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAF 60
TP+T E R D T+ +D ++AD EF++ + P+ LITT R
Sbjct: 83 TPKTKERKRRVDVTILENKEDAEIINDEADDEFAAFFRDRQNPRTLITTGEHPCFRTKQL 142
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ ELL ++PNS Y R +Y LK+I ++ ++FT+++VV +EP L++ LP+GPTA
Sbjct: 143 VKELLWLVPNSIYRPRKSYTLKEITQFCCNREFTNLLVVTDRIKEPHNLIVSHLPEGPTA 202
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F++S + +++ T H PEL+ NF TRLG R+ R+++ LFP + ++ GR V T
Sbjct: 203 TFRVSNFLSYAQLEDPAPRTEHYPELIFKNFDTRLGRRIARMLECLFPATRDYAGRAVAT 262
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
F NQRD+IF R HRYIF++ ++ RLQE GPRFTL+L
Sbjct: 263 FLNQRDYIFLRTHRYIFDSLKA------------------------VRLQEMGPRFTLRL 298
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SLQ GTFD + GE+EW K E D +++
Sbjct: 299 LSLQSGTFDRQFGEYEWYRKKEHDADTLEWYM 330
>gi|336363609|gb|EGN91989.1| hypothetical protein SERLA73DRAFT_191777 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381066|gb|EGO22218.1| hypothetical protein SERLADRAFT_472723 [Serpula lacrymans var.
lacrymans S7.9]
Length = 361
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 163/329 (49%), Gaps = 85/329 (25%)
Query: 3 PRTIENTREPDETVCR----PD------DDELFAGND------ADEFSSILKQGCAPKIL 46
PRT++NTRE D ++ PD +EL ND +D FS PK+L
Sbjct: 59 PRTLDNTREFDPSIPSSSKTPDGSLTVQQEEL--SNDIASDPFSDYFSFTQDPSIPPKVL 116
Query: 47 ITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNR 103
ITT S F EL+ V P + Y +R Y++ KI +A K+ F + VV+ N
Sbjct: 117 ITTSTKASKATFEFCDELVGVFPGAEYIRRKKGKGYEIGKIAGWAAKRGFKHLCVVNENG 176
Query: 104 REPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLI 163
++P A+ ++ LP+GPTA+FKL+ + L I H T H PELVLNNFAT LGH VGR+
Sbjct: 177 KKPTAITLVYLPNGPTAYFKLTSVELTSQIYGHARATSHHPELVLNNFATSLGHAVGRMF 236
Query: 164 QSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQ 223
Q+LFP PEF+GR++VTFHNQRDF+FFR HRY F + E
Sbjct: 237 QTLFPPMPEFQGRQLVTFHNQRDFLFFRRHRYAFRSTEK--------------------- 275
Query: 224 KVITRLQECGPRFTLKL-------------------VSLQHGTFDTKGG----------- 253
LQE GPRFTLKL + GT + G
Sbjct: 276 ---VALQEIGPRFTLKLRWVKKGLPAVHNFGEAPKPPEIDAGTTEADDGDQDENAENKET 332
Query: 254 ----------EFEWVHKPEMDTSRRRFFL 272
++ W+HKPE+DTSRR FFL
Sbjct: 333 PTVGQLPKDNDYLWIHKPELDTSRRTFFL 361
>gi|254574286|ref|XP_002494252.1| Nucleolar protein involved in the assembly of the large ribosomal
subunit [Komagataella pastoris GS115]
gi|238034051|emb|CAY72073.1| Nucleolar protein involved in the assembly of the large ribosomal
subunit [Komagataella pastoris GS115]
gi|328353925|emb|CCA40322.1| Brix domain-containing protein F44G4.1 [Komagataella pastoris CBS
7435]
Length = 293
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 151/273 (55%), Gaps = 37/273 (13%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAF 60
P TIE+ R DETV + EL DEFS + PK+L+TT G F
Sbjct: 56 VPNTIESMRVFDETV----NAEL---EGTDEFSEYFENTDKDPKVLVTTSENPKKNGLIF 108
Query: 61 ISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
L +P S + +R Y +K + Y + F+ +IVV+ ++ + + I LP GPT
Sbjct: 109 AKMLQDFLPGSVFVERKEKYTMKDMASYCSNRQFSDLIVVNEDKNKVTGITFIHLPTGPT 168
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
+F ++ ++ K I HGNPT HIPEL+LNNF+TRLG VGRL QSLFP P+F+GR+VV
Sbjct: 169 FYFSVTNIIESKKIAGHGNPTSHIPELILNNFSTRLGQTVGRLFQSLFPHRPQFQGRQVV 228
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
T HNQRDFIFFR HRY F+ ++ G LQE GP+FT+K
Sbjct: 229 TLHNQRDFIFFRRHRYKFKNEKRVG------------------------LQELGPQFTMK 264
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L +Q G + E +W HKP MD +++F+L
Sbjct: 265 LRRVQKGIRE----EIDWEHKPSMDRDKKKFYL 293
>gi|145540062|ref|XP_001455721.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423529|emb|CAK88324.1| unnamed protein product [Paramecium tetraurelia]
Length = 338
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 156/275 (56%), Gaps = 27/275 (9%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDA--DEFSSILKQGCAPKILITTCRFNSNRGP 58
+ P TI++ RE DE +DD+ N+ DEF + ++G PKI+ITT S +
Sbjct: 88 LGPLTIDDKREIDENFVFDEDDQEELQNEELIDEFQNYFQEGQDPKIIITTSERPSRQLF 147
Query: 59 AFISELLSVI-PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F+ ++ V P +HY+ R + LK+I EY+ K +T ++V +R+E L+ + LP G
Sbjct: 148 DFLKDVKDVFGPETHYWPRKQFSLKEIQEYSINKGYTELLVFREHRKEVSQLIYVHLPAG 207
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
PT FKL+ +I +HG T H PEL+LN F T++G RVGR + +LFP P+FRGRR
Sbjct: 208 PTYKFKLTNYTPCDEIHHHGRFTDHNPELILNQFNTKVGRRVGRGLAALFPSKPQFRGRR 267
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
VVTFHNQRDFIFFRHHRY+F+ + K + LQE GPRFT
Sbjct: 268 VVTFHNQRDFIFFRHHRYMFQEEGQKVA-----------------------LQELGPRFT 304
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L+L L+ G F+ GE E+ + + R FL
Sbjct: 305 LQLKQLKMGLFND-DGEIEFEARDDYYVKRTAAFL 338
>gi|294874819|ref|XP_002767114.1| IMP4 U3 small nucleolar ribonucleoprotein, putative [Perkinsus
marinus ATCC 50983]
gi|239868542|gb|EEQ99831.1| IMP4 U3 small nucleolar ribonucleoprotein, putative [Perkinsus
marinus ATCC 50983]
Length = 421
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 171/314 (54%), Gaps = 66/314 (21%)
Query: 5 TIENTREPDETVCRPD-DDELFAGNDADEF----------SSILKQGCA----------- 42
TIE RE D T+ P+ DDE+ A DEF S +L A
Sbjct: 128 TIEMMREADVTMLPPEGDDEVKADERMDEFRHTFPTPPPTSEVLPPPAAATVLSTPSTVA 187
Query: 43 ------------------PKILITTCR-FNSNRGPAFISELLSVIPNSHYYKRGTYDLKK 83
PKI++TT + S R I EL+ V+P Y+++ + + K
Sbjct: 188 TSVEGEEEEEEEERESVEPKIMLTTSMAYPSERSYGLIKELVEVVPGLQYFRKKHFPITK 247
Query: 84 IIEYAKKKDFTSIIVVHTNRR-EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG---NP 139
I ++A + FT+++V+ +R+ EP +L I LP+GPT++++L+ L L D+K HG NP
Sbjct: 248 ICDFANNRGFTAVVVLSEDRKHEPSSLHITSLPEGPTSYWRLTSLELGADMK-HGATCNP 306
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLFPQ-SPEFRGRRVVTFHNQRDFIFFRHHRYIFE 198
PEL+LN F TRLGHRVGR I SLF P+F+GRRVV FHNQRDF+FFRH+RY+F
Sbjct: 307 DDR-PELLLNGFGTRLGHRVGRQIGSLFGAIQPDFKGRRVVAFHNQRDFVFFRHYRYVFR 365
Query: 199 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 258
ES +D + + A LQE GPRFTLKL SLQ G F + GE+E+V
Sbjct: 366 DLES--TDKDDRCA----------------LQEIGPRFTLKLRSLQLGLFAKRTGEYEYV 407
Query: 259 HKPEMDTSRRRFFL 272
+P+ SR+ F L
Sbjct: 408 WRPDSQVSRKVFAL 421
>gi|294951305|ref|XP_002786920.1| Ribosome production factor, putative [Perkinsus marinus ATCC 50983]
gi|239901498|gb|EER18716.1| Ribosome production factor, putative [Perkinsus marinus ATCC 50983]
Length = 370
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/260 (44%), Positives = 157/260 (60%), Gaps = 28/260 (10%)
Query: 5 TIENTREPDETVCRPD-DDELFAGNDADEFSSILKQGCAPKILITTCR-FNSNRGPAFIS 62
TIE RE D T+ P+ DDE+ A DEF PKI++TT + S R I
Sbjct: 128 TIEMMREADVTMLPPEGDDEVKADERMDEFR-YFSDSVEPKIMLTTSMAYPSERSYGLIK 186
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR-EPDALLIIGLPDGPTAH 121
EL+ V+P Y+++ + + KI ++A + FT+++V+ +R+ EP +L I LP+GPT++
Sbjct: 187 ELVEVVPGLQYFRKKHFPITKICDFANNRGFTAVVVLSEDRKHEPSSLHITSLPEGPTSY 246
Query: 122 FKLSKLVLRKDIKNHG---NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQ-SPEFRGRR 177
++L+ L L D+K HG NP PEL+LN F TRLGHRVGR I SLF P+F+GRR
Sbjct: 247 WRLTSLELGADMK-HGATCNPDDR-PELLLNGFGTRLGHRVGRQIGSLFGAIQPDFKGRR 304
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
VV FHNQRDF+FFRH+RY+F ES +D + + A LQE GPRFT
Sbjct: 305 VVAFHNQRDFVFFRHYRYVFRDLES--TDKDDRCA----------------LQEIGPRFT 346
Query: 238 LKLVSLQHGTFDTKGGEFEW 257
LKL SLQ G F + GE E+
Sbjct: 347 LKLRSLQLGLFAKRNGEDEF 366
>gi|402223735|gb|EJU03799.1| Brix-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 353
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 163/319 (51%), Gaps = 73/319 (22%)
Query: 3 PRTIENTREPDETVCRPD-------------------DDELFAGND--ADEFSSILKQGC 41
P+T++N RE D ++ + L ND A FSS
Sbjct: 59 PKTLDNMREYDPSMLTASSQAHPQSSTAAHVGREMHPESALDIQNDPFAAYFSSENDPTL 118
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIV 98
APK+L+TT +N F EL + P + + +R + + KI E++ K+ +++++V
Sbjct: 119 APKVLVTTSTKATNVTYEFCHELCGIFPGAQFVRRKKGQDFQIGKIAEWSAKRGYSALLV 178
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
V+ + + P+A+ ++ LPDGP+A FKLS + L KDI HG +GH PELVLN F TRLGH
Sbjct: 179 VNEDHKVPNAITLVHLPDGPSALFKLSSIRLSKDIIGHGRSSGHHPELVLNGFVTRLGHA 238
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
VGR+ Q LFP PEF GR+ VT HNQRDF+FFR HRY+F++ E G
Sbjct: 239 VGRMFQILFPPLPEFEGRQAVTLHNQRDFLFFRRHRYVFKSTEKTG-------------- 284
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK------------GGE------------ 254
LQE GPRFTLKL L+ G K G E
Sbjct: 285 ----------LQEIGPRFTLKLRWLKKGLPTAKESQAPPELHIADGAEEQIGSVEMAGET 334
Query: 255 -FEWVHKPEMDTSRRRFFL 272
++W+ KP+M+ +RR FFL
Sbjct: 335 DYDWLWKPKMEVNRRTFFL 353
>gi|395331828|gb|EJF64208.1| Brix-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 383
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 160/314 (50%), Gaps = 76/314 (24%)
Query: 11 EPDETVCRPDDD---ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSV 67
E D+ V +P+D+ ++ A A+ FS L PK+LITT + F EL+ V
Sbjct: 94 ETDQPVVQPEDESAADIAADPFAEYFSGALDPSTPPKVLITTSPKATRLTYDFCDELVGV 153
Query: 68 IPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKL 124
P + + +R +++ +I +A +D++ ++VV+ + ++P+AL ++ LP+GPTA+FKL
Sbjct: 154 FPGAEFIRRKKGKGFEMGRIAGWAANRDYSHLVVVNEDMKKPNALTVVHLPEGPTAYFKL 213
Query: 125 SKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 184
+ + L + I H T H PELVLN F TRLGH VGRL Q+ FP PEF+GR+VVT HNQ
Sbjct: 214 TSIELSQQISGHARSTAHFPELVLNGFVTRLGHTVGRLFQTFFPPMPEFQGRQVVTLHNQ 273
Query: 185 RDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 244
RDF+FFR HRY F + E LQE GPRFTLKL L+
Sbjct: 274 RDFLFFRRHRYAFRSTEK------------------------VALQEIGPRFTLKLRYLK 309
Query: 245 HG--------------TFDT----------------------KGG----------EFEWV 258
G FDT + G E+ W+
Sbjct: 310 KGLPAVKNLGAPSKPLEFDTGEDEEAERKDAPEEGMAIDGESEAGKKKVLPPTDDEYLWI 369
Query: 259 HKPEMDTSRRRFFL 272
KPE++T+RR FFL
Sbjct: 370 WKPELETTRRTFFL 383
>gi|313217833|emb|CBY41243.1| unnamed protein product [Oikopleura dioica]
Length = 174
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 131/198 (66%), Gaps = 31/198 (15%)
Query: 82 KKIIEYAKKKDFTSIIVVHTNRRE-PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 140
KKII A KK FT++IVV +R+ P+ L II LP GPTAHFK+S + LR+ K PT
Sbjct: 1 KKIIPQAIKKGFTAMIVVSADRKWVPNDLKIIYLPGGPTAHFKMSSVRLREKTKGGDTPT 60
Query: 141 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
H+PEL+LNNF +RLG R+GR+ +LFPQ PEF GR+VVTFHNQRD+IFFR HRYIF ++
Sbjct: 61 THLPELILNNFKSRLGRRIGRMFAALFPQVPEFEGRQVVTFHNQRDYIFFRQHRYIFRSE 120
Query: 201 ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH- 259
+ G L+E GPRFTLKL SLQ GTFD+K GEFE+ H
Sbjct: 121 KRAG------------------------LKELGPRFTLKLRSLQKGTFDSKYGEFEYEHR 156
Query: 260 KPEMDT-----SRRRFFL 272
+ EMDT S+++FFL
Sbjct: 157 RKEMDTEGHGYSKKKFFL 174
>gi|399218339|emb|CCF75226.1| unnamed protein product [Babesia microti strain RI]
Length = 344
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 156/302 (51%), Gaps = 65/302 (21%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDA-------------DEFSSILKQGCAPKILIT 48
TP+TIE+ R E ++GN DEF PKILIT
Sbjct: 77 TPKTIESMRRV----------ETWSGNHTFNLVDTEGVACMIDEFQEYYNGNVTPKILIT 126
Query: 49 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-REPD 107
+ R S + FI ELL +IPNS Y R + LK ++++A + FT+II+V+ R + P
Sbjct: 127 SNRRPSYKLRTFIKELLLIIPNSIYLARSEFLLKNVVKHALNESFTAIIMVNQGRDKLPH 186
Query: 108 ALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLF 167
+ I LPDGPT ++L+ L L ++ + H PE+VL+NF T LG R+GR + SLF
Sbjct: 187 SFHIATLPDGPTVFYRLTSLKLASEMVGAAYSSTHYPEIVLDNFTTVLGQRLGRQLGSLF 246
Query: 168 P-----------------QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
P Q+P+F GRRV+TF NQRDFIFFRHHRY+F + E
Sbjct: 247 PPKSNPVMGLISNVIMLTQNPDFEGRRVITFRNQRDFIFFRHHRYVFRSMEK-------- 298
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
L E GPRFTLK+ S+Q G FD G +E++ KP++ R+RF
Sbjct: 299 ----------------CSLVEIGPRFTLKIRSVQEGAFDLVHGLYEFLWKPDLQVDRKRF 342
Query: 271 FL 272
FL
Sbjct: 343 FL 344
>gi|149237234|ref|XP_001524494.1| ribosome production factor 1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452029|gb|EDK46285.1| ribosome production factor 1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 294
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 157/274 (57%), Gaps = 39/274 (14%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGND--ADEFSSILKQGCAPKILITTCRFNSNRGPA 59
P TIE+ R DET+ + GND A+ F ++ K+ PKIL+TT
Sbjct: 57 VPDTIESKRIYDETIAQE-----VEGNDEFAEYFENLTKE---PKILLTTNVNAKKAAYE 108
Query: 60 FISELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
F L+ +PN + KR ++++ + ++ +++T++I+++ ++++ + + +I LP+GP
Sbjct: 109 FADMLMDFLPNVTFIKRKKDFNIQDMAKFCSNREYTTLIIINEDKKKVNGMTLINLPEGP 168
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
T +F ++ +V K IK HG T HIPELVLNNF TRLG VGRL QS+FP PE +GR+V
Sbjct: 169 TFYFSITSIVDGKRIKGHGRATDHIPELVLNNFNTRLGKTVGRLFQSIFPHRPELQGRQV 228
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
+T HNQRD+IF R HRY+F +E G LQE GP+FTL
Sbjct: 229 ITLHNQRDYIFLRRHRYVFRNEEKVG------------------------LQELGPQFTL 264
Query: 239 KLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
KL +Q G G+ W KP+M+ +++F+L
Sbjct: 265 KLRRMQKGV----RGDVVWEFKPDMERDKKKFYL 294
>gi|344229608|gb|EGV61493.1| Brix-domain-containing protein [Candida tenuis ATCC 10573]
Length = 295
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 151/272 (55%), Gaps = 36/272 (13%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P T+++ R DET+ + E DEF + PK+L+TT ++ F
Sbjct: 59 VPETLDSKRVYDETIVEDMEGE-------DEFDAYFASDKPPKLLLTTSKYAKKPAYEFA 111
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
L+ +P+ + KR + + ++++ +++T +++++ ++ L I LP+GPT
Sbjct: 112 DLLMDFLPDVTFVKRKPQFSINDMVKFCNNREYTDLVILNEFNKKVTGLTFIHLPEGPTF 171
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F ++ + K I+ HG T H PEL+LNNF TRLG VGRL QSLFP+ PEF GR+V+T
Sbjct: 172 YFSITSVTEGKKIRGHGRSTDHTPELILNNFNTRLGKTVGRLFQSLFPKKPEFEGRQVIT 231
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IFFR HRY+F+++E G LQE GP+FTLKL
Sbjct: 232 LHNQRDYIFFRRHRYLFKSEERVG------------------------LQEIGPQFTLKL 267
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQ G D E EW +PEM+ +R+F+L
Sbjct: 268 RRLQKGIRD----ETEWEFRPEMEKDKRKFYL 295
>gi|193654819|ref|XP_001950585.1| PREDICTED: probable ribosome production factor 1-like
[Acyrthosiphon pisum]
Length = 313
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 155/281 (55%), Gaps = 36/281 (12%)
Query: 2 TPRTIENTREPDETVCRPDDDE-------LFAGNDADEFSSILKQGCAPKILITTCRFNS 54
PRTIENTREPD TV DD++ L A + DEF+ PK+LIT
Sbjct: 59 VPRTIENTREPDSTVLHSDDEDYDQKAQDLAAEFEHDEFADYYSHLYKPKVLITYKAKPL 118
Query: 55 NRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 114
+ F L ++PNS R +K+ I+ A K +T +I+++ +R EP+ L+++ L
Sbjct: 119 RKVREFGKILTEIVPNSVRIFRRDASVKETIQAAINKGYTDLIIINEDRNEPNGLILVHL 178
Query: 115 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
PDGPTA+F+LS ++ + + T H PE++ NF T LG V R++ ++F Q EF+
Sbjct: 179 PDGPTAYFRLSNVIF-PNKRQRKEFTDHRPEVITTNFTTGLGKTVARMLGAVFHQDAEFK 237
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GR VVT HNQRD+IFFRHHRY F K L+E GP
Sbjct: 238 GRHVVTMHNQRDYIFFRHHRYKF-------------------------LKNKPYLRELGP 272
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
+FTL+L LQ G +D K GE+ W+ + +++TSRRRFFL
Sbjct: 273 KFTLRLQYLQEGLYDPKCGEYRWIMTDKRHKIETSRRRFFL 313
>gi|170086756|ref|XP_001874601.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649801|gb|EDR14042.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 358
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 159/325 (48%), Gaps = 78/325 (24%)
Query: 2 TPRTIENTREPDETVCRPD-----------DDELFAGNDADEFSSILKQ----GCAPKIL 46
PRT++NTRE D ++ D +E+ A AD F+S PKIL
Sbjct: 58 VPRTLDNTREFDPSILTADPSSSAGGSFSGQEEVAADLAADPFASYFTSEDDPSIPPKIL 117
Query: 47 ITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNR 103
ITT S F EL+ V P + + +R ++L +I +A + + + VV+ +
Sbjct: 118 ITTSPKASTSTYDFCDELVGVFPGAEFIRRKKGKGFELGRIAGWAADRGYKHLCVVNEDM 177
Query: 104 REPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLI 163
++P+A+ ++ LP+GPTA+FKL+ + L K I H T H PELVLN F TRLGH VGRL
Sbjct: 178 KKPNAITLVHLPNGPTAYFKLTSVELTKQIYGHARATSHHPELVLNGFVTRLGHAVGRLF 237
Query: 164 QSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQ 223
Q+ FP PEF+GR++VT HNQRDF+FFR HRY F + E
Sbjct: 238 QTTFPPLPEFQGRQIVTLHNQRDFLFFRRHRYAFRSPEK--------------------- 276
Query: 224 KVITRLQECGPRFTLKLVSL--------------QHGTFDT------------------- 250
LQE GPRFTLKL L Q FD+
Sbjct: 277 ---VALQEIGPRFTLKLRWLKKNIPAVQNFGEQPQPLAFDSEPTETQSKEAASEQIPKKV 333
Query: 251 ---KGGEFEWVHKPEMDTSRRRFFL 272
K E+ W KPE++T+RR FFL
Sbjct: 334 VPPKQDEYIWTWKPELETTRRTFFL 358
>gi|68470826|ref|XP_720420.1| likely nucleolar ribosomal biogenesis factor RPF1p [Candida
albicans SC5314]
gi|68471288|ref|XP_720192.1| likely nucleolar ribosomal biogenesis factor RPF1p [Candida
albicans SC5314]
gi|46442048|gb|EAL01340.1| likely nucleolar ribosomal biogenesis factor RPF1p [Candida
albicans SC5314]
gi|46442287|gb|EAL01577.1| likely nucleolar ribosomal biogenesis factor RPF1p [Candida
albicans SC5314]
gi|238881523|gb|EEQ45161.1| ribosome production factor 1 [Candida albicans WO-1]
Length = 296
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 156/273 (57%), Gaps = 39/273 (14%)
Query: 3 PRTIENTREPDETVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
P TI++ R DET+ DDE F+++L++ PKIL+TT F
Sbjct: 60 PDTIDSKRIYDETIAAEVEGDDEF-----QSYFTNLLEE---PKILLTTSANAKKPAYEF 111
Query: 61 ISELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
++ +PN + KR Y ++ + +Y +DFT+++V++ ++++ + + +I LP+GPT
Sbjct: 112 ADMIMDFLPNVTFIKRKKEYTMQDMAKYCSNRDFTALLVINEDKKKVNGITLINLPEGPT 171
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
+F ++ +V K IK HG ++PE+VLNNF +RLG VGRL QS+FP PE +GR+V+
Sbjct: 172 FYFSITSIVDGKRIKGHGKAGDYLPEIVLNNFNSRLGKTVGRLFQSIFPHKPELQGRQVI 231
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
T HNQRD+IFFR HRYIF +E G LQE GP+FTLK
Sbjct: 232 TLHNQRDYIFFRRHRYIFRNEEKVG------------------------LQELGPQFTLK 267
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L +Q G G+ W H+P+M+ +++F+L
Sbjct: 268 LRRMQKGV----RGDVVWEHRPDMERDKKKFYL 296
>gi|428671937|gb|EKX72852.1| RNA processing factor [Babesia equi]
Length = 307
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 139/244 (56%), Gaps = 25/244 (10%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TIE+ R DET+ D E+ A DEFS PK++IT+ R S + F+
Sbjct: 77 VPETIESMRRFDETIVNDGDPEIDAEEAIDEFSGHFNGDSTPKLMITSSRRPSEKMRTFM 136
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPTA 120
ELL ++PNS YY R + LK +++ + F++I++V+ + P L + LP GPT
Sbjct: 137 KELLLILPNSIYYARDEHKLKALVKAGTEGGFSAILLVNQGPDKMPSGLYLCSLPSGPTT 196
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FKL+ + ++K G T PELVLN+F TRLG R+GR + +LFP +PEF GRRV+T
Sbjct: 197 FFKLTSITFASEMKGGGVLTPTTPELVLNSFNTRLGRRIGRQLGALFPLTPEFEGRRVIT 256
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
FHNQRD IFFRHHRY+F N KK L+E GPRFTLK+
Sbjct: 257 FHNQRDMIFFRHHRYVFR---------NEKKCS---------------LKEIGPRFTLKV 292
Query: 241 VSLQ 244
S+Q
Sbjct: 293 HSVQ 296
>gi|224150509|ref|XP_002336968.1| predicted protein [Populus trichocarpa]
gi|222837476|gb|EEE75855.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/104 (84%), Positives = 96/104 (92%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
PRTIENTRE DETVC+PDD++LFAGNDADEFSSILK+ PKILITT RFNS RGPAFIS
Sbjct: 46 PRTIENTRENDETVCKPDDEKLFAGNDADEFSSILKRERTPKILITTSRFNSTRGPAFIS 105
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 106
ELL VIPN+HYYKRGTYDLKKI+ YAKK+DFTS+IVVHTNRREP
Sbjct: 106 ELLQVIPNAHYYKRGTYDLKKIVVYAKKQDFTSLIVVHTNRREP 149
>gi|449548069|gb|EMD39036.1| hypothetical protein CERSUDRAFT_93076 [Ceriporiopsis subvermispora
B]
Length = 396
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 165/362 (45%), Gaps = 116/362 (32%)
Query: 3 PRTIENTREPDETVC-----------------------RPDDDELFAGND---------- 29
PRT++NTRE D ++ +P+ D D
Sbjct: 59 PRTLDNTREYDPSILTANPAASSSSSVQPEASTSAAVQKPEIDPSLQPQDESAADIESDP 118
Query: 30 -ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKII 85
A FS L PK+LITT + F EL+SV P + +++R +++ KI
Sbjct: 119 FAAYFSGALDPSVPPKVLITTSPKATRVSYEFCEELVSVFPGAEFHRRPKGRGFEMGKIA 178
Query: 86 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPE 145
+A + ++ ++VV+ N ++P+A+ +I LP+GPTA+FKL+ + L K I H T H PE
Sbjct: 179 GWAAGRGYSHMMVVNENTKKPNAITMIYLPNGPTAYFKLTSIELAKQIHGHARSTAHHPE 238
Query: 146 LVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
LVLN F TRLGH VGRL Q+LFP PEF+GR+VVT HNQRDF+FFR HRY F + E
Sbjct: 239 LVLNGFVTRLGHTVGRLFQTLFPPMPEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEK--- 295
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG------------------- 246
LQE GPRFTLKL SL+ G
Sbjct: 296 ---------------------VALQEIGPRFTLKLRSLRKGLPAVKNFGEPTKSLEFDNF 334
Query: 247 -----------------------TFDTKG-------------GEFEWVHKPEMDTSRRRF 270
+ DTK ++ W KPE++T+RR F
Sbjct: 335 AEDEDKDVEDNDAEMSGEQEEQESGDTKADQSAQPKVTPPTEDQYLWTWKPELETTRRTF 394
Query: 271 FL 272
FL
Sbjct: 395 FL 396
>gi|241954494|ref|XP_002419968.1| ribosome biogenesis protein, putative [Candida dubliniensis CD36]
gi|223643309|emb|CAX42183.1| ribosome biogenesis protein, putative [Candida dubliniensis CD36]
Length = 320
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 161/276 (58%), Gaps = 45/276 (16%)
Query: 3 PRTIENTREPDETVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSN-RGPA 59
P TI++ R DET+ DDE F+++L++ PKIL+TT N+N + PA
Sbjct: 84 PDTIDSKRIYDETIAAEVEGDDEF-----QSYFTNLLEE---PKILLTT---NANAKKPA 132
Query: 60 --FISELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F ++ +PN + KR Y ++ + +Y + FT++IV++ ++++ + + +I LP+
Sbjct: 133 YEFADMIMDFLPNVTFIKRKKEYTMQDMAKYCSNRGFTALIVINEDKKKVNGITLINLPE 192
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPT +F +S +V K IK HG ++PE+VLNNF +RLG VGRL QS+FP PE +GR
Sbjct: 193 GPTFYFSVSSIVDGKRIKGHGKAGDYLPEIVLNNFNSRLGKTVGRLFQSIFPHKPELQGR 252
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
+V+T HNQRD+IFFR HRYIF +E G LQE GP+F
Sbjct: 253 QVITLHNQRDYIFFRRHRYIFRNEEKVG------------------------LQELGPQF 288
Query: 237 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
TLKL +Q G G+ W H+P+M+ +++F+L
Sbjct: 289 TLKLRRMQKGV----RGDIVWEHRPDMERDKKKFYL 320
>gi|393223052|gb|EJD08536.1| Brix-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 397
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 149/274 (54%), Gaps = 53/274 (19%)
Query: 2 TPRTIENTREPDETV------CRPDD--------------DELFAGNDADEFSSILKQG- 40
PRT++NTRE D ++ +PD DE +D F+S
Sbjct: 58 VPRTLDNTREFDPSILTAAPSSQPDPPLEQTASDSGQQPADESALDISSDPFASYFASAF 117
Query: 41 -----CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKD 92
APK+LITT +S F EL++V+P + + +R +++ I +A +
Sbjct: 118 DSDPSVAPKVLITTSFKSSKLTYDFCDELVNVVPGAEFIRRKKGKGFEIGNIAAWAAGRG 177
Query: 93 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 152
+++++VV+ + ++P+A+ +I LP+GP+++F+LS + L K I H T H PELVLNNF
Sbjct: 178 YSNMVVVNEDMKKPNAITLIHLPEGPSSYFRLSSIQLTKQISGHARSTDHFPELVLNNFV 237
Query: 153 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKA 212
TRLGH VGR+ Q+LFP PEF+GR+VVT HNQRDF+FFR HRY F + E
Sbjct: 238 TRLGHTVGRMFQTLFPPMPEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEKAA-------- 289
Query: 213 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
LQE GPRFTLKL ++ G
Sbjct: 290 ----------------LQEIGPRFTLKLRWMKKG 307
>gi|85000735|ref|XP_955086.1| RNA processing factor [Theileria annulata strain Ankara]
gi|65303232|emb|CAI75610.1| RNA processing factor, putative [Theileria annulata]
Length = 267
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
TP TIE+ R DET+ P+D E+ DEFS + PK+LIT+ R S + ++
Sbjct: 74 TPHTIESLRRFDETIVDPEDVEVKFEEQIDEFSDHFSRNITPKLLITSTRRPSEKMRTYM 133
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVV-HTNRREPDALLIIGLPDGPTA 120
ELL V+ NS Y+ R Y LK+++++AK+ FTSI++V + + P+ L I LP GPT
Sbjct: 134 KELLLVLSNSFYFAREEYKLKEVVKHAKENGFTSILLVTQGSNKLPNGLYICSLPRGPTT 193
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
FKL+ L L ++K G PE+VLN+F TRLG R+GR I SLF PEF GRRV+T
Sbjct: 194 FFKLTSLKLASEMKGAGVLVATKPEIVLNSFNTRLGRRIGRQIASLFSLDPEFEGRRVIT 253
Query: 181 FHNQRDFIFFRHHR 194
FHNQRD IFFRHHR
Sbjct: 254 FHNQRDMIFFRHHR 267
>gi|354547802|emb|CCE44537.1| hypothetical protein CPAR2_403400 [Candida parapsilosis]
Length = 296
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 36/272 (13%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFI 61
P TI++ R DET+ + D DEFS PKIL+TT F
Sbjct: 59 PATIDSKRVYDETLSAKIE------GDEDEFSEYFTNLSKDPKILLTTNIGAKKPAYEFA 112
Query: 62 SELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
L+ +PN+ + KR ++++ + ++ +++T + +++ ++++ L ++ LP+GPT
Sbjct: 113 DMLMDFLPNTTFVKRKKDFNIQDMAKFCSNREYTLLAIINEDKKKVTGLTLVNLPEGPTF 172
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F +S ++ K IK HG T HIPELVLNNF TRLG VGRL QS+FP PE +GR+V+T
Sbjct: 173 YFSISSIIDGKRIKGHGVATDHIPELVLNNFNTRLGKTVGRLFQSVFPHKPELQGRQVIT 232
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IF R HRY+F +E G LQE GP+FTLKL
Sbjct: 233 LHNQRDYIFLRRHRYVFRNEEKVG------------------------LQELGPQFTLKL 268
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+Q G G+ W +P+M+ +R+F+L
Sbjct: 269 RRMQKGV----KGDVVWEFRPDMERDKRKFYL 296
>gi|145479943|ref|XP_001425994.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393066|emb|CAK58596.1| unnamed protein product [Paramecium tetraurelia]
Length = 338
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 152/260 (58%), Gaps = 27/260 (10%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGNDA--DEFSSILKQGCAPKILITTCRFNSNRGP 58
+ P TI++ RE DE +DD+ N+ DEF + ++G PKI+ITT S +
Sbjct: 88 LGPLTIDDKRELDENFVFDEDDQEELQNEELIDEFQNYFQEGQDPKIIITTSERPSRQLF 147
Query: 59 AFISELLSVI-PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F+ ++ V P +HY+ R + +K+I EY+ K +T ++V +R+E L+ + LP G
Sbjct: 148 DFLKDVKDVFGPETHYWPRKQFSIKEIQEYSINKGYTELLVFREHRKEVSQLIYVHLPAG 207
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
PT FKL+ +I +HG T H PEL+LN+F T++G RVGR + +LFP P+FRGRR
Sbjct: 208 PTYKFKLTNYTPCDEIHHHGRFTDHNPELILNHFNTKVGRRVGRGLAALFPSKPQFRGRR 267
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
VVTFHNQRDFIFFRHHRY+F+ + K + LQE GPRFT
Sbjct: 268 VVTFHNQRDFIFFRHHRYMFQEEGQKVA-----------------------LQELGPRFT 304
Query: 238 LKLVSLQHGTFDTKGG-EFE 256
L+L L+ G F+ G EFE
Sbjct: 305 LQLKQLKLGLFNDDGEIEFE 324
>gi|448530428|ref|XP_003870061.1| Rpf1 nucleolar protein [Candida orthopsilosis Co 90-125]
gi|380354415|emb|CCG23930.1| Rpf1 nucleolar protein [Candida orthopsilosis]
Length = 296
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 36/272 (13%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFI 61
P TI++ R DET+ + D DEFS P+IL+TT F
Sbjct: 59 PATIDSKRVYDETLSAKIE------GDEDEFSEYFTNLAKDPQILLTTNIGAKKPAYEFA 112
Query: 62 SELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
L+ +PN+ + KR ++++ + ++ +++T + +++ ++++ L ++ LP+GPT
Sbjct: 113 DMLMDFLPNTTFVKRKKEFNIQDMAKFCSNREYTLLAIINEDKKKVTGLTLVNLPEGPTF 172
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F +S +V K IK HG T HIPELVLNNF TRLG VGRL QS+FP PE +GR+V+T
Sbjct: 173 YFSISSIVDGKRIKGHGVATDHIPELVLNNFNTRLGKTVGRLFQSIFPHKPELQGRQVLT 232
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
HNQRD+IF R HRY+F +E G LQE GP+FTLKL
Sbjct: 233 LHNQRDYIFLRRHRYVFRNEEKVG------------------------LQELGPQFTLKL 268
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+Q G G+ W +P+M+ +R+F+L
Sbjct: 269 RRMQKGV----KGDVVWEFRPDMERDKRKFYL 296
>gi|255721589|ref|XP_002545729.1| ribosome production factor 1 [Candida tropicalis MYA-3404]
gi|240136218|gb|EER35771.1| ribosome production factor 1 [Candida tropicalis MYA-3404]
Length = 295
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 161/276 (58%), Gaps = 45/276 (16%)
Query: 3 PRTIENTREPDETVCRP--DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSN-RGPA 59
P TI++ R DET+ DDE + F ++L++ PKIL+TT N+N + PA
Sbjct: 59 PATIDSKRVFDETIAAEVEGDDEF-----GNYFRNLLEE---PKILLTT---NANAKKPA 107
Query: 60 --FISELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F ++ +PN+ + KR Y ++ + ++ + +T+++V++ ++++ + + +I LP+
Sbjct: 108 YEFADMIMDFLPNTTFIKRKKEYTMQDMAKFCSNRGYTTLMVINEDKKKVNGITMINLPE 167
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPT +F ++ + K IK HG ++PE++LNNF +RLG VGRL QS+FP PE +GR
Sbjct: 168 GPTFYFSVTSITDGKRIKGHGKAGDYLPEIILNNFNSRLGKTVGRLFQSIFPHKPELQGR 227
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
+V+T HNQRD+IFFR HRYIF +E G LQE GP+F
Sbjct: 228 QVITLHNQRDYIFFRRHRYIFRNEEKVG------------------------LQELGPQF 263
Query: 237 TLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
TLKL +Q G G+ W H+P+M+ +R+F+L
Sbjct: 264 TLKLRRMQKGV----RGDVVWEHRPDMERDKRKFYL 295
>gi|403415097|emb|CCM01797.1| predicted protein [Fibroporia radiculosa]
Length = 394
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 168/360 (46%), Gaps = 114/360 (31%)
Query: 3 PRTIENTREPDETVC-----------------------RPD---DDELFAGNDADEFSSI 36
PRT++NTR+ D ++ PD DE A D FSS
Sbjct: 59 PRTLDNTRQFDPSILTANPAAQPEASTSSTPAEHGHAHSPDHQPQDESAADIANDPFSSY 118
Query: 37 LK----QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAK 89
PK+LITT + F EL++V P + + +R +++ +I +A
Sbjct: 119 FSGTGDPSVPPKVLITTSPKATRTTYNFCDELVNVFPGAEFIRRKKGKGFEMGRIAGWAA 178
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 149
+D++ ++VV+ + ++ +A+ I+ LP+GPTA+FKL+ + K I H PT H PELVLN
Sbjct: 179 GRDYSHLMVVNEDMKKLNAITIVYLPEGPTAYFKLTSVEFSKQIHGHARPTEHFPELVLN 238
Query: 150 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
F TRLGH VGRL Q+LFP PEF+GR+VVT HNQRDF+FFR HRY F +
Sbjct: 239 GFVTRLGHTVGRLFQTLFPPMPEFQGRQVVTLHNQRDFLFFRRHRYAFRS---------- 288
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG-----------------TFDTKG 252
+EK S LQE GPRFTLKL SL+ G TF+
Sbjct: 289 -------TEKVS-------LQEIGPRFTLKLRSLRKGLPAVKNLGEPSKPLEFDTFEDGD 334
Query: 253 G----------------------------------------EFEWVHKPEMDTSRRRFFL 272
G E++WV KPE++T+R FFL
Sbjct: 335 GEDVKMGEEGQEKQEPDQDDEEEGVEKEAQVPKKVLPPTEDEYQWVWKPELETTRSTFFL 394
>gi|390596642|gb|EIN06043.1| Brix-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 402
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 28/232 (12%)
Query: 19 PDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 78
P++D FA + + + PK+L+TT + F EL ++ P S + +R
Sbjct: 104 PENDADFANDPFASYFTAADPTKPPKVLVTTSPRATRASYEFCEELCAIFPGSEFVRRNK 163
Query: 79 ----YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 134
+++ +I +A + + +++VV+ + ++P+A+ I+ LP+GPTA+FKL+ + L K I
Sbjct: 164 KSRGFEMGRIAGWAAGRGYGALMVVNEDMKKPNAITIVHLPEGPTAYFKLTSIQLSKQIH 223
Query: 135 NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 194
H T H PELVLN F TRLGH VGR+ Q+LFP PEF+GR+VVT HNQRDF+FFR HR
Sbjct: 224 GHARATAHYPELVLNGFVTRLGHAVGRMFQTLFPPLPEFQGRQVVTLHNQRDFLFFRRHR 283
Query: 195 YIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
Y F + E LQE GPRFTLKL SL+ G
Sbjct: 284 YAFRSTEK------------------------VALQEIGPRFTLKLRSLRKG 311
>gi|225562195|gb|EEH10475.1| RNA processing factor [Ajellomyces capsulatus G186AR]
Length = 433
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 147/278 (52%), Gaps = 17/278 (6%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGC--APKILITTCRFNSNRGPAF 60
P E P ++ R + +L A +F S+ +G PKILITT ++ A
Sbjct: 165 PSATERATSPTQS-SRSTNLDLAPDALAAKFPSLFTKGPPPTPKILITTSINSTLHAQAH 223
Query: 61 ISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 114
+ L + PNS Y +R Y +++I ++A + FT+++VV +++ + I+ L
Sbjct: 224 L--LTDLFPNSVYIRRSAHKHSHKYSVREISKFASNRKFTAVVVVEEDQKRVSGITIVHL 281
Query: 115 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
P GPT HF +S + K + HGN TGH PEL+LNNF T LG L QSLFP PE
Sbjct: 282 PVGPTFHFSVSNWIEGKKLPGHGNSTGHWPELILNNFRTPLGMLAAHLFQSLFPPQPELE 341
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GR+VVT HNQRD+IF R HRY+F K G K+ K + V T LQE GP
Sbjct: 342 GRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGPDGKEMK----GVEGVRTGLQELGP 397
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
RFTLKL + G G E+EW K M+ R +F L
Sbjct: 398 RFTLKLRRIDKGIQRASGQEWEW--KGGMEKQRTKFQL 433
>gi|392576963|gb|EIW70093.1| hypothetical protein TREMEDRAFT_30267 [Tremella mesenterica DSM
1558]
Length = 419
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 152/313 (48%), Gaps = 83/313 (26%)
Query: 19 PDDDELFAGNDADEFSSILKQ------GCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
PD+DE + + +Q G PKILITT F +L +V P
Sbjct: 131 PDEDEEMSEEAKADEEEEGQQRTEPVYGPPPKILITTSPSPGKSTYRFCDDLKNVFPGGE 190
Query: 73 YYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 129
++KR ++L ++ + K+DF ++I+V+ + +EP+A+ +I LP+GPTA+F+L+ + L
Sbjct: 191 FFKRPKGKGFELGRVARWGIKRDFVAVIIVNEDHKEPNAITLIKLPEGPTAYFRLTSIQL 250
Query: 130 RKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 189
+I H P+ H PEL+LNNF T LG+ VGRL SLFP P+FRGR+VVT HNQRDF+F
Sbjct: 251 GSEIYGHAKPSPHSPELILNNFTTLLGNSVGRLFGSLFPPLPQFRGRQVVTLHNQRDFLF 310
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG--- 246
FR HRY+F + RLQE GPRFTLKL L+ G
Sbjct: 311 FRRHRYMFSS------------------------PTRARLQEIGPRFTLKLRWLRKGLPA 346
Query: 247 -------------------------------------TFDTKGG----------EFEWVH 259
+ + KG E+EW
Sbjct: 347 VTAADGRVPGGGDAEEEEISRQEKMDEDEAAAEMGKESTEVKGKPVIPSLDEEQEYEWKW 406
Query: 260 KPEMDTSRRRFFL 272
KP+M+ SRR FFL
Sbjct: 407 KPKMEVSRRTFFL 419
>gi|226478930|emb|CAX72960.1| Ribosome production factor 1 [Schistosoma japonicum]
Length = 312
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 158/278 (56%), Gaps = 17/278 (6%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+T+E R DET+ +D+E+ ++ DE SSI PKIL+T R F
Sbjct: 44 PQTLETLRTVDETIVPREDEEVVIEHETDELSSIFSGEVTPKILLTHSDRVCPRTIGFCK 103
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
+L VIPN R LKKII A ++ FT +++V+ ++++ ++L++ LP+GPTA F
Sbjct: 104 DLCLVIPNIQLVARWHLPLKKIIPLAIERGFTCLLIVNEDQKKINSLIVSHLPNGPTATF 163
Query: 123 KLSKLVLRKDIKNHGN----PTGHIPELVLNNFATRLGHRVGRLIQSLFPQS---PEFRG 175
+L+ ++LR+++++ + P L+ F TRLG R R++ LFP P
Sbjct: 164 RLTNVLLRREMRSTRKVKYVESNVTPHLITTRFMTRLGLRTERILSGLFPNDSRLPPQPH 223
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
R + FHNQRD+IFFRH+RYI S D N K K +++E + + E GP+
Sbjct: 224 SRTIVFHNQRDYIFFRHYRYIHRNTIS-NDDGNENKTK-SRNEHIA-------MNEVGPK 274
Query: 236 FTLKLVSLQHGTFDTKGGEFEWVH-KPEMDTSRRRFFL 272
FTLKL S+Q GTFD++ G +EWV K E+ SRR F L
Sbjct: 275 FTLKLRSIQLGTFDSQFGNYEWVRKKTEIGRSRRTFVL 312
>gi|389745478|gb|EIM86659.1| Brix-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 429
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 123/208 (59%), Gaps = 28/208 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT----YDLKKIIEYAKKKDFTSIIV 98
PK+LITT + F EL+ + P + + +R ++L +I +A + + ++IV
Sbjct: 127 PKVLITTSAKATRVTYDFCEELVGIFPGAEFIRRPKKGRGFELGRIAGWAAGRGYGNLIV 186
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
V+ N ++P+A+ ++ LPDGPTA+FKL+ + L K I H T H PELVLNNF TRLGH
Sbjct: 187 VNENMKKPNAITMVHLPDGPTAYFKLTSIALTKQIFGHARATAHNPELVLNNFVTRLGHT 246
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
VGR+ Q+ FP PEF+GR+VVT HNQRDF+FFR HRY F T E
Sbjct: 247 VGRMFQTFFPALPEFQGRQVVTLHNQRDFLFFRRHRYAFRTPEK---------------- 290
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHG 246
LQE GPRFTLKL SL+ G
Sbjct: 291 --------VALQEIGPRFTLKLRSLKKG 310
>gi|253743432|gb|EES99826.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia intestinalis ATCC 50581]
Length = 365
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 142/255 (55%), Gaps = 20/255 (7%)
Query: 22 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP-AFISELLSVIPNS-HYYKRGTY 79
+EL DEF K+ ITT +N+ FI + + V+ Y R
Sbjct: 127 EELVHAETLDEFGKYFDGTRTVKVAITTSIGCTNKKTLQFIDDFIKVLGGVITYIPREEL 186
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 139
++++ + FTS+IVVH +R ++++ LP GPTA F+++ + KD+ G P
Sbjct: 187 QIRQLAVRLIDEGFTSVIVVHEDRDVITHMMMMALPMGPTAWFRMTNVYTHKDLVGSGVP 246
Query: 140 TGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFE 198
P E+++NNF TRLG RVGR+IQS+ + R R+V+TFHNQRDFIFFR +RYIFE
Sbjct: 247 IPDCPPEVIMNNFKTRLGRRVGRMIQSMLSREEHLRARQVITFHNQRDFIFFRAYRYIFE 306
Query: 199 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 258
K+ KD SE VI R+ E GP+FTLKL LQ G FD E+EW
Sbjct: 307 NKDK----------KDPTSE------VIVRMHELGPQFTLKLKWLQKGLFDPHNEEYEWF 350
Query: 259 HKPEMDT-SRRRFFL 272
+KPEMD SR RFFL
Sbjct: 351 YKPEMDNHSRTRFFL 365
>gi|159113037|ref|XP_001706746.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia ATCC 50803]
gi|157434845|gb|EDO79072.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia ATCC 50803]
Length = 366
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 151/276 (54%), Gaps = 24/276 (8%)
Query: 5 TIENTREPDETVCRPDDD----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP-A 59
T+++ R+ D T+ + EL DEF K+ ITT N+G
Sbjct: 107 TLDSKRDEDATMTAHAKEVVAEELVHAETLDEFGEYFDGTRIVKVAITTSVGCKNKGTLQ 166
Query: 60 FISELLSVIPNS-HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
FI + + V+ Y R ++++ + FTS+I+VH +R ++++ LP GP
Sbjct: 167 FIDDFIKVLGGVISYIPREELQIRQLAVRLIDEGFTSVIIVHEDRDIITHMMMMALPAGP 226
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
TA F+++ + K++ G P P E+++NNF TRLG RVGR+IQS+ + R R+
Sbjct: 227 TAWFRMTNVYTHKELVGSGVPIPDCPPEVIMNNFKTRLGRRVGRMIQSMLSREEHLRARQ 286
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
V+TFHNQRDFIFFR +RYIFE K+ KD SE VI R+ E GP+FT
Sbjct: 287 VITFHNQRDFIFFRAYRYIFENKDK----------KDPTSE------VIVRMHELGPQFT 330
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMD-TSRRRFFL 272
LKL LQ G FD E+EW +KPEMD SR RFFL
Sbjct: 331 LKLKWLQKGLFDPHNEEYEWFYKPEMDHHSRTRFFL 366
>gi|325091801|gb|EGC45111.1| RNA processing factor 1 [Ajellomyces capsulatus H88]
Length = 433
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 147/278 (52%), Gaps = 17/278 (6%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGC--APKILITTCRFNSNRGPAF 60
P E P ++ R + +L A +F SI +G PKILITT ++ A
Sbjct: 165 PSATERATSPTQS-SRSTNLDLAPDALAAKFPSIFTKGPPPTPKILITTSINSTLHAQAH 223
Query: 61 ISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 114
+ L + PNS Y +R Y +++I ++A + FT+++VV +++ + I+ L
Sbjct: 224 L--LTDLFPNSVYIRRSAHKHSHKYSVREISKFASNRKFTAVVVVEEDQKRVSGITIVHL 281
Query: 115 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
P GPT HF +S + K + HGN TGH PEL+LNNF T LG L +SLFP PE
Sbjct: 282 PVGPTFHFSVSNWIEGKKLPGHGNSTGHWPELILNNFRTPLGMLAAHLFRSLFPPQPELE 341
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GR+VVT HNQRD+IF R HRY+F K G K+ K + V T LQE GP
Sbjct: 342 GRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGPDGKEMK----GVEGVRTGLQELGP 397
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
RFTLKL + G G E+EW K M+ R +F L
Sbjct: 398 RFTLKLRRIDKGIQRASGQEWEW--KGGMEKQRTKFQL 433
>gi|240277282|gb|EER40791.1| RNA processing factor 1 [Ajellomyces capsulatus H143]
Length = 433
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 147/278 (52%), Gaps = 17/278 (6%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGC--APKILITTCRFNSNRGPAF 60
P E P ++ R + +L A +F S+ +G PKILITT ++ A
Sbjct: 165 PSATERATSPTQS-SRSTNLDLAPDALAAKFPSLFTKGPPPTPKILITTSINSTLHAQAH 223
Query: 61 ISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL 114
+ L + PNS Y +R Y +++I ++A + FT+++VV +++ + I+ L
Sbjct: 224 L--LTDLFPNSVYIRRSAHKQSHKYSVREISKFASNRKFTAVVVVEEDQKRVSGITIVHL 281
Query: 115 PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR 174
P GPT HF +S + K + HGN TGH PEL+LNNF T LG L +SLFP PE
Sbjct: 282 PVGPTFHFSVSNWIEGKKLPGHGNSTGHWPELILNNFRTPLGMLAAHLFRSLFPPQPELE 341
Query: 175 GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGP 234
GR+VVT HNQRD+IF R HRY+F K G K+ K + V T LQE GP
Sbjct: 342 GRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGPDGKEMK----GVEGVRTGLQELGP 397
Query: 235 RFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
RFTLKL + G G E+EW K M+ R +F L
Sbjct: 398 RFTLKLRRIDKGIQRASGQEWEW--KGGMEKQRTKFQL 433
>gi|308159992|gb|EFO62505.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia P15]
Length = 366
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 24/276 (8%)
Query: 5 TIENTREPDETVCRPDDD----ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGP-A 59
T+++ R+ D T+ + EL DEF K+ ITT +N+G
Sbjct: 107 TLDSKRDEDATLTAHAKEIVAEELVHAETLDEFGEYFDGTRIVKVAITTSIGCTNKGTLQ 166
Query: 60 FISELLSVIPNS-HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
FI + + V+ Y R ++++ + FTS+I+VH +R ++++ LP GP
Sbjct: 167 FIDDFIKVLGGVISYIPREELQIRQLAVRLIDEGFTSVIIVHEDRDIITHMMMMALPMGP 226
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
TA F+++ + K++ G P P E+++NNF TRLG RVGR+IQS+ + R R+
Sbjct: 227 TAWFRMTNVYTHKELVGSGVPIPDCPPEVIMNNFKTRLGRRVGRMIQSMLSREEHLRARQ 286
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
V+TFHNQRDFIFFR +RYIFE K+ KD SE VI R+ E GP+FT
Sbjct: 287 VITFHNQRDFIFFRAYRYIFENKDK----------KDPTSE------VIVRMHELGPQFT 330
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMD-TSRRRFFL 272
LKL LQ G FD E+EW ++PEMD SR RFFL
Sbjct: 331 LKLKWLQKGLFDPHNEEYEWFYRPEMDHHSRTRFFL 366
>gi|392589923|gb|EIW79253.1| Brix-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 387
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 143/256 (55%), Gaps = 36/256 (14%)
Query: 3 PRTIENTREPDETVCRPDDDEL---FAGNDA-DEFSSI-----LKQGCAPKILITTCRFN 53
PRT++NTRE D + D L F+ + A D F+ + PK+LITT
Sbjct: 59 PRTLDNTREHDPSTVVSTDGPLSHEFSSDIASDPFAEYFTFTDVDPTVPPKVLITTSPKV 118
Query: 54 SNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 110
S F EL+ + P + Y +R +++ +I +A + + ++VV+ + ++P+A+
Sbjct: 119 SKGTHEFCDELVGIFPGAEYIRRKKGKGFEVGRIAGWAAGRGYKHMVVVNEDMKKPNAIT 178
Query: 111 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 170
+I LP+GP A+FKL+ + L K I H T H PELVLNNF+T LGH VGR+ Q+LFP
Sbjct: 179 LIYLPNGPMAYFKLTSVELTKQIYGHARATPHNPELVLNNFSTSLGHAVGRMFQTLFPPL 238
Query: 171 PEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ 230
PEF+GR+VVT HNQRDF+FFR HRY F + E LQ
Sbjct: 239 PEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEK------------------------VALQ 274
Query: 231 ECGPRFTLKLVSLQHG 246
E GPRFTLKL L++G
Sbjct: 275 EIGPRFTLKLRWLKNG 290
>gi|302686930|ref|XP_003033145.1| hypothetical protein SCHCODRAFT_53993 [Schizophyllum commune H4-8]
gi|300106839|gb|EFI98242.1| hypothetical protein SCHCODRAFT_53993 [Schizophyllum commune H4-8]
Length = 359
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 150/325 (46%), Gaps = 79/325 (24%)
Query: 3 PRTIENTREPD--------ETVCRPDDDELFAGNDADEFSSILKQG---CAPKILITTCR 51
P+T++N RE D T D E A D F+S PKILITT
Sbjct: 59 PKTLDNQREFDPSFLTADPSTSTSEDRQETDADIANDPFASFFSDADPDVPPKILITTGP 118
Query: 52 FNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDA 108
F EL V P + + +R +++ +I +A + + ++VV+ + R+P+A
Sbjct: 119 QAHKPTYEFCDELAGVFPGAEFIRRKKGKGFEMGRIAGWAADRGYKHMLVVNEDHRQPNA 178
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 168
+ +I LP GPTA+FKLS + L K I H T H PELVLN F TRLG VGR+ Q+ FP
Sbjct: 179 ITLIHLPAGPTAYFKLSSIQLTKQIYGHARATAHHPELVLNGFVTRLGLSVGRMFQTCFP 238
Query: 169 QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR 228
PEF+GR+VVT HNQRDF+FFR HRY F + E
Sbjct: 239 PLPEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEK------------------------VA 274
Query: 229 LQECGPRFTLKLVSLQHG-----------------------------------------T 247
LQE GPRFTLKL L+ G T
Sbjct: 275 LQEIGPRFTLKLRWLKKGIPAVQQFGAPPKPLEFDAAEPSEEAMETDEPTPDTSKPPQKT 334
Query: 248 FDTKGGEFEWVHKPEMDTSRRRFFL 272
E+ WV KPE++T+RR FFL
Sbjct: 335 VPPTQDEYVWVWKPELETTRRTFFL 359
>gi|405123223|gb|AFR97988.1| coiled-coil protein [Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 138/243 (56%), Gaps = 31/243 (12%)
Query: 7 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 66
E++ PD + D E +A I Q +P+ILITT + F +L +
Sbjct: 131 ESSEMPDWEIEEKVDGE---DQEASAMRDITTQ-SSPRILITTSPSPCKQTYQFCDDLKN 186
Query: 67 VIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK 123
V P ++KR +++ ++ +A K+ + ++IVV+ + + P+A+ +I LP GPTA+FK
Sbjct: 187 VFPGGEFFKRPKGRGFEIGRVSRWASKRGYQALIVVNEDHKIPNAVTLINLPSGPTAYFK 246
Query: 124 LSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
LS ++L +I H PT H PEL+LNNF T LG+ VG+L SLFP+ P+FRGR+VVT HN
Sbjct: 247 LSSIILSSNIYGHARPTPHSPELILNNFTTLLGNSVGQLFGSLFPRQPQFRGRQVVTLHN 306
Query: 184 QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
QRDF+FFR HRY+F + S +LQE GPRFTLKL L
Sbjct: 307 QRDFLFFRRHRYMFSSATS------------------------AKLQEIGPRFTLKLRWL 342
Query: 244 QHG 246
+ G
Sbjct: 343 RKG 345
>gi|393240388|gb|EJD47914.1| Brix-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 343
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 135/254 (53%), Gaps = 49/254 (19%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKR----GTYDLKKIIEYAKKKDFTSIIVV 99
K+LITT + F EL+ V P+S + +R + + I +A ++ +T++IVV
Sbjct: 114 KVLITTSPKVTKATYDFCDELVGVFPDSEFVRRLRKNRAFSIGNIAIWAARRGYTALIVV 173
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 159
+ +R+ P+A+ ++ LP+GPTA+FKLS + L K I H + H PEL+LN F T LGH V
Sbjct: 174 NEDRKVPNAITLVQLPNGPTAYFKLSSIELTKQIFGHARASPHHPELILNGFVTTLGHTV 233
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
GR+ Q+LFP PEF GR+VVT HNQRDF+FFR HRY F + E
Sbjct: 234 GRMFQTLFPPLPEFEGRQVVTLHNQRDFLFFRRHRYAFRSTEKVA--------------- 278
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE---------------------FEWV 258
LQE GPRFTLKL L+ K E +EW+
Sbjct: 279 ---------LQEIGPRFTLKLRWLKKSLPAPKKDEPRAKDGEAPPEQEQTGEKDEGYEWI 329
Query: 259 HKPEMDTSRRRFFL 272
K E++ SRR FFL
Sbjct: 330 WKKELEVSRRTFFL 343
>gi|409081430|gb|EKM81789.1| hypothetical protein AGABI1DRAFT_118863 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 375
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 155/341 (45%), Gaps = 95/341 (27%)
Query: 3 PRTIENTREPDETVCRPDD------DELFAGNDADEFSSILKQG---CAPKILITTCRFN 53
P+T++NTRE D ++ D DE+ A D F+S PKILITT
Sbjct: 59 PKTLDNTREFDPSIINHDSNEDSTQDEIAADIATDPFASYFTTDDPTTPPKILITTSPKA 118
Query: 54 SNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 110
S F EL+ V P + + +R +++ I + + + + VV+ + ++P+A+
Sbjct: 119 SKATYNFCDELVGVFPGAEFIRRKKGKGFEIGWIAAWTANRGYKHLCVVNEDHKKPNAIT 178
Query: 111 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 170
++ LP GPTA+FKL+ + L K I H T H PEL+LN F TRLGH +GR+ Q+ FP
Sbjct: 179 LVYLPHGPTAYFKLTSVELTKQIYGHARATAHNPELILNGFTTRLGHGIGRMFQTTFPPV 238
Query: 171 PEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ 230
PEF+GR+VVT HNQRDF+FFR HRY F + E LQ
Sbjct: 239 PEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEKVA------------------------LQ 274
Query: 231 ECGPRFTLKLVSLQHG--------------TFDTKGGEFE-------------------- 256
E GPRFTLKL L+ TFDT FE
Sbjct: 275 EIGPRFTLKLRWLKKNVPAVQNFGEDPKPLTFDTDDDPFEQSDEVQPEQQNVQTADMEEE 334
Query: 257 -------------------------WVHKPEMDTSRRRFFL 272
W KPE++T+RR FFL
Sbjct: 335 EGEGESSAALPQSLNIVPPKQDEYIWQWKPELETTRRTFFL 375
>gi|426196668|gb|EKV46596.1| hypothetical protein AGABI2DRAFT_222942 [Agaricus bisporus var.
bisporus H97]
Length = 375
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 155/341 (45%), Gaps = 95/341 (27%)
Query: 3 PRTIENTREPDETVCRPDD------DELFAGNDADEFSSILKQG---CAPKILITTCRFN 53
P+T++NTRE D ++ D DE+ A D F+S PKILITT
Sbjct: 59 PKTLDNTREFDPSIINHDSNEDSTQDEIAADIATDPFASYFTTDDPTTPPKILITTSPKA 118
Query: 54 SNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALL 110
S F EL+ V P + + +R +++ I + + + + VV+ + ++P+A+
Sbjct: 119 SKATYNFCDELVGVFPGAEFIRRKKGKGFEIGWIAAWTANRGYKHLCVVNEDHKKPNAIT 178
Query: 111 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 170
++ LP GPTA+FKL+ + L K I H T H PEL+LN F TRLGH +GR+ Q+ FP
Sbjct: 179 LVYLPHGPTAYFKLTSVELTKQIYGHARATAHNPELILNGFTTRLGHGIGRMFQTTFPPV 238
Query: 171 PEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ 230
PEF+GR+VVT HNQRDF+FFR HRY F + E LQ
Sbjct: 239 PEFQGRQVVTLHNQRDFLFFRRHRYAFRSTEKVA------------------------LQ 274
Query: 231 ECGPRFTLKLVSLQHG--------------TFDTKGGEFE-------------------- 256
E GPRFTLKL L+ TFDT FE
Sbjct: 275 EIGPRFTLKLRWLKKNVPAVQNFGEDPKPLTFDTDDDPFEQSDEVQPEQQNVQTADMEEE 334
Query: 257 -------------------------WVHKPEMDTSRRRFFL 272
W KPE++T+RR FFL
Sbjct: 335 EGEGESSAALPQSLNIVPPKQDEYIWQWKPELETTRRTFFL 375
>gi|224031483|gb|ACN34817.1| unknown [Zea mays]
gi|413950308|gb|AFW82957.1| hypothetical protein ZEAMMB73_160675 [Zea mays]
Length = 108
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/111 (73%), Positives = 92/111 (82%), Gaps = 3/111 (2%)
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+IQSLFPQ P FRGRRVVTFHNQRD+IFFRHHRYIFETKE K + + SEK
Sbjct: 1 MIQSLFPQDPNFRGRRVVTFHNQRDYIFFRHHRYIFETKEKKVASKEKTSGSKSGSEK-- 58
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
Q+VI RLQECGPRFTLKL++LQHGTFDT+ GE+EWVHKP+MDTSRRRFFL
Sbjct: 59 -QQVICRLQECGPRFTLKLLTLQHGTFDTRSGEYEWVHKPDMDTSRRRFFL 108
>gi|134109667|ref|XP_776512.1| hypothetical protein CNBC4380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259190|gb|EAL21865.1| hypothetical protein CNBC4380 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 434
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 123/207 (59%), Gaps = 27/207 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVV 99
P+ILITT + F +L +V P ++KR +++ ++ +A K+ + ++IVV
Sbjct: 163 PRILITTSPSPCKQTYQFCDDLKNVFPGGEFFKRPKGRGFEIGRVSRWASKRGYRALIVV 222
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 159
+ + + P+A+ +I LP GPTA+FKLS + L +I H PT H PEL+LNNF T LG+ V
Sbjct: 223 NEDHKIPNAITLINLPSGPTAYFKLSSITLSSNIYGHARPTPHSPELILNNFTTLLGNSV 282
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
GRL SLFP P+FRGR+VVT HNQRDF+FFR HRY+F + S
Sbjct: 283 GRLFGSLFPPQPQFRGRQVVTLHNQRDFLFFRRHRYMFSSATS----------------- 325
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHG 246
+LQE GPRFTLKL L+ G
Sbjct: 326 -------AKLQEIGPRFTLKLRWLRKG 345
>gi|225685036|gb|EEH23320.1| ribosome production factor 1 [Paracoccidioides brasiliensis Pb03]
gi|226294348|gb|EEH49768.1| brix domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 437
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 133/237 (56%), Gaps = 14/237 (5%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APKILITT ++ A + L + PNS Y +R Y +++I ++A ++FT+
Sbjct: 209 APKILITTSINSTLHDQAQL--LTDLFPNSVYIRRSAHKYAHKYSVREISKFASNRNFTA 266
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++VV +++ + I+ LP GPT HF +S V K + HGN TGH PEL+LNNF T L
Sbjct: 267 LVVVEEDQKRVSGMTIVHLPVGPTFHFSVSNWVEGKKLPGHGNSTGHWPELILNNFRTPL 326
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G L ++LFP PE GR+VVT HNQRD+IF R HRY+F K G K+
Sbjct: 327 GMLAAHLFRTLFPAQPELVGRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGADGKEM 386
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K + + T LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 387 K----GVEGIRTGLQELGPRFTLKLRRVDKGIQRASGQEWEW--KGGMEKQRTKFQL 437
>gi|302904019|ref|XP_003048985.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729919|gb|EEU43272.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 412
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 136/241 (56%), Gaps = 17/241 (7%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
PKILITT ++ A + L + PNS+Y R Y L++I +YA +++T+
Sbjct: 179 VPKILITTSLNSTIHEEAHL--LCGLFPNSNYIPRSAHRYGHKYSLREICKYASNREYTA 236
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++++ + ++P L ++ LP GPT HF ++ + K + HGNPT H PEL+LNNF T L
Sbjct: 237 VVLLKEDSKKPTGLSVVHLPTGPTFHFSITNWIEGKKLPGHGNPTNHYPELLLNNFKTPL 296
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G +L Q++FP PEF+GR+VVT HNQRD+IF R HRY+F K G K+
Sbjct: 297 GLLTAKLFQTMFPPRPEFQGRQVVTLHNQRDYIFVRRHRYVFRDKRQTEKSIVGADGKEI 356
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFF 271
K + + LQE GPRFTLKL + G G E E W K +M+ R+RF
Sbjct: 357 K----GVENIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGEDATQWEWKAKMEKDRKRFN 411
Query: 272 L 272
L
Sbjct: 412 L 412
>gi|295660509|ref|XP_002790811.1| brix domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281364|gb|EEH36930.1| brix domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 437
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 133/237 (56%), Gaps = 14/237 (5%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APKILITT ++ A + L + PNS Y +R Y +++I ++A ++FT+
Sbjct: 209 APKILITTSINSTLHDQAQL--LTDLFPNSVYIRRSAHKYAHKYSVREISKFASNRNFTA 266
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++VV +++ + I+ LP GPT HF +S V K + HGN TGH PEL+LNNF T L
Sbjct: 267 LVVVEEDQKRVSGMTIVHLPVGPTFHFSVSNWVEGKKLPGHGNSTGHWPELILNNFRTPL 326
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G L ++LFP PE GR+VVT HNQRD+IF R HRY+F K G K+
Sbjct: 327 GMLAAHLFRTLFPAQPELVGRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGADGKEM 386
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K + + T LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 387 K----GVEGIRTGLQELGPRFTLKLRRVDKGIQRASGQEWEW--KGGMEKQRTKFQL 437
>gi|58264840|ref|XP_569576.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225808|gb|AAW42269.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 434
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 123/207 (59%), Gaps = 27/207 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVV 99
P+ILITT + F +L +V P ++KR +++ ++ +A K+ + ++IVV
Sbjct: 163 PRILITTSPSPCKQTYQFCDDLKNVFPGGEFFKRPKGRGFEIGRVSRWASKRGYRALIVV 222
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 159
+ + + P+A+ +I LP GPTA+FKLS + L +I H PT H PEL+LNNF T LG+ V
Sbjct: 223 NEDHKIPNAITLINLPSGPTAYFKLSSITLSSNIYGHARPTPHSPELILNNFTTLLGNSV 282
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
GRL SLFP P+FRGR+VVT HNQRDF+FFR HRY+F + S
Sbjct: 283 GRLFGSLFPPQPQFRGRQVVTLHNQRDFLFFRRHRYMFPSATS----------------- 325
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHG 246
+LQE GPRFTLKL L+ G
Sbjct: 326 -------AKLQEIGPRFTLKLRWLRKG 345
>gi|258571684|ref|XP_002544645.1| hypothetical protein UREG_04162 [Uncinocarpus reesii 1704]
gi|237904915|gb|EEP79316.1| hypothetical protein UREG_04162 [Uncinocarpus reesii 1704]
Length = 419
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 135/238 (56%), Gaps = 20/238 (8%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APKILITT ++ A I L PNS Y +R + +++I ++A +D+T+
Sbjct: 191 APKILITTSLNSTLHSQAAI--LTEFFPNSIYIRRSAHRYSHKFSVREIAKFAANRDYTA 248
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++VV +++ L ++ LP GPT HF +S + K + HGNPTGH PEL+LNNF T L
Sbjct: 249 VVVVEEDQKRVSGLTVVHLPVGPTFHFSVSNWIEGKKLPGHGNPTGHWPELILNNFRTPL 308
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKA 212
G L ++LFP P+ GR+VVT HNQRD+IF R HRY+F K E DA+G +
Sbjct: 309 GLLTAHLFRTLFPPQPDLIGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKSVVDADGNEI 368
Query: 213 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K + + LQE GPRFTLKL + G + G E+EW K M+ R +F
Sbjct: 369 KGVEG-------IRAGLQELGPRFTLKLRRVDKGIQRSSGQEWEW--KGRMEKQRTKF 417
>gi|392565502|gb|EIW58679.1| Brix-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 396
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 154/325 (47%), Gaps = 87/325 (26%)
Query: 7 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 66
E T++P++ ++ FA FS + PK+L+TT + F EL+
Sbjct: 100 EPTQQPEDETAADIANDPFAAY----FSGAIDPSVPPKVLVTTSPKATRTTSDFCDELVG 155
Query: 67 VIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK 123
V P + + +R +++ +I +A + ++ ++VV+ + ++ +A+ ++ LP+GPTA+FK
Sbjct: 156 VFPGAEFIRRKKGKGFEVGRIAGWAANRGYSHLMVVNEDTKKLNAITMVYLPNGPTAYFK 215
Query: 124 LSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
LS + L + I H T H PELVLN F TRLGH VGRL Q+ FP PEF+GR+VVT HN
Sbjct: 216 LSSVELSQKISGHARATSHYPELVLNGFVTRLGHTVGRLFQTFFPPMPEFQGRQVVTLHN 275
Query: 184 QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
QRDF+FFR HRY F + E LQE GPRFTLKL +
Sbjct: 276 QRDFLFFRRHRYAFRSTEK------------------------VALQEIGPRFTLKLRYM 311
Query: 244 QHG--------------TFDT------------------------KGGEFE--------- 256
+ G FD + GE E
Sbjct: 312 KKGLPAVKNLGAPSKHLEFDAEEHEQEKLALKDIEMGESAAQEQDEAGEKEPEPPKQKKV 371
Query: 257 ---------WVHKPEMDTSRRRFFL 272
W+ KPE++T+RR FFL
Sbjct: 372 VPPTEDEYLWIWKPELETTRRTFFL 396
>gi|322709377|gb|EFZ00953.1| Brix domain containing protein [Metarhizium anisopliae ARSEF 23]
Length = 415
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 139/241 (57%), Gaps = 19/241 (7%)
Query: 43 PKILITTCRFNSNRGPAFISELL-SVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
PK+L+TT N + ++LL ++ PNS Y R + Y L++I ++A +++T+
Sbjct: 183 PKVLVTTS---LNSTIHYEAQLLGTLFPNSTYIPRSSHRYGHKYSLREICKFATNREYTT 239
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
+++V + ++P L ++ LP GPT HF +S + + + HGNPT H PEL+LNNF T L
Sbjct: 240 VLLVKEDLKKPTGLSVVHLPSGPTFHFSISNWIEGRKLPGHGNPTNHYPELLLNNFKTPL 299
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G +L Q+LFP PEF+GR+VVT HNQRD+IF R HRY+F K + G K+
Sbjct: 300 GLLTAKLFQTLFPPRPEFQGRQVVTLHNQRDYIFVRRHRYVFREKRTTEKSIVGADGKEM 359
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFF 271
K + + LQE GPRFTLKL + G G E E W K +M+ R+RF
Sbjct: 360 K----GVEGIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGEDATQWEWKAKMEKDRKRFN 414
Query: 272 L 272
L
Sbjct: 415 L 415
>gi|164662501|ref|XP_001732372.1| hypothetical protein MGL_0147 [Malassezia globosa CBS 7966]
gi|159106275|gb|EDP45158.1| hypothetical protein MGL_0147 [Malassezia globosa CBS 7966]
Length = 438
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 139/286 (48%), Gaps = 80/286 (27%)
Query: 41 CAPKILITTC-----------RFNSNRGPA-----FISELLSVIPNSHYYKRGTYD---L 81
P ILITT N+ PA F+ ELL+V P + Y R L
Sbjct: 179 APPAILITTSLPSNATSPHLLSANARSHPAEAVREFVKELLNVFPGAEYRPRAKAQGAGL 238
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 141
KI +A+ + + +++V+ + ++P +L ++ LP GPTA F+L+ + L KDI H PT
Sbjct: 239 GKICRWARARRYDAVLVIGESNKKPCSLTLVALPLGPTALFRLTSVSLGKDIFGHARPTP 298
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
H PELVLNNF T LGHRVGRL+Q LFP P+ GR+VVT HNQRDFIFFR HRY F + E
Sbjct: 299 HTPELVLNNFTTALGHRVGRLLQHLFPLVPQLEGRQVVTAHNQRDFIFFRRHRYEFRSPE 358
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH------GTFDTK---- 251
LQE GPRFTLKL SL G +D +
Sbjct: 359 KAA------------------------LQEIGPRFTLKLHSLTSGLPKGAGAWDGRFVDE 394
Query: 252 -------------------------GGEFEWVHKPEMDTSRRRFFL 272
G EF+W KP+M SRR F+L
Sbjct: 395 LEESPAAAQRASAEDVDAAEYSTNDGVEFKW--KPKMSVSRRNFYL 438
>gi|322697173|gb|EFY88956.1| Brix domain containing protein [Metarhizium acridum CQMa 102]
Length = 415
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 139/241 (57%), Gaps = 19/241 (7%)
Query: 43 PKILITTCRFNSNRGPAFISELL-SVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
PK+L+TT N + ++LL ++ PNS Y R + Y L++I ++A +D+T+
Sbjct: 183 PKVLVTTS---INSTIHYEAQLLGTLFPNSTYIPRSSHRYGHKYSLREICKFATNRDYTT 239
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
+++V + ++P L ++ LP GPT +F +S + + + HGNPT H PEL+LNNF T L
Sbjct: 240 VLLVKEDLKKPTGLSVVHLPSGPTFYFSISNWIEGRKLPGHGNPTNHYPELLLNNFKTPL 299
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G +L Q+LFP PEF+GR+VVT HNQRD+IF R HRY+F K + G K+
Sbjct: 300 GLLTAKLFQTLFPPRPEFQGRQVVTLHNQRDYIFVRRHRYVFREKRATEKSIVGADGKEM 359
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFF 271
K + + LQE GPRFTLKL + G G E E W K +M+ R+RF
Sbjct: 360 K----GVEGIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGEDATQWEWKAKMEKDRKRFN 414
Query: 272 L 272
L
Sbjct: 415 L 415
>gi|425766567|gb|EKV05173.1| RNA processing factor 1 [Penicillium digitatum PHI26]
gi|425781720|gb|EKV19667.1| RNA processing factor 1 [Penicillium digitatum Pd1]
Length = 431
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 139/251 (55%), Gaps = 16/251 (6%)
Query: 30 ADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 81
A +F ++ +G PKILITT ++ G A L V PNS Y +R + +
Sbjct: 189 AAKFPTLFTEGPPPTPKILITTGLNSTLHGQA--ETLTEVFPNSVYIRRNAHRYSHKFSI 246
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 141
++I ++A ++FT+++V++ +++ P L I+ LP GPT HF +S + K + HG T
Sbjct: 247 REISKFAANRNFTTVVVLNEDQKRPSGLTIVHLPVGPTFHFTISNWIEGKRLPGHGRATE 306
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
H PEL+LNNF T LG L ++LFP PEF GR+VVT HNQRD+IF R HRY+F K
Sbjct: 307 HWPELILNNFRTPLGLLTAHLFRTLFPPQPEFEGRQVVTLHNQRDYIFVRRHRYVFREKR 366
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G K E + + T LQE GPRFTLKL + G G E+EW K
Sbjct: 367 ETEKAVVGADGK----EMLGVEGIRTGLQELGPRFTLKLRRVDKGIQRASGQEWEW--KG 420
Query: 262 EMDTSRRRFFL 272
M+ +R F L
Sbjct: 421 GMEKTRTLFQL 431
>gi|261189482|ref|XP_002621152.1| RNA processing factor 1 [Ajellomyces dermatitidis SLH14081]
gi|239591729|gb|EEQ74310.1| RNA processing factor 1 [Ajellomyces dermatitidis SLH14081]
gi|239608957|gb|EEQ85944.1| RNA processing factor 1 [Ajellomyces dermatitidis ER-3]
gi|327354026|gb|EGE82883.1| RNA processing factor 1 [Ajellomyces dermatitidis ATCC 18188]
Length = 434
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 132/236 (55%), Gaps = 14/236 (5%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A + L + PNS Y +R Y +++I ++A ++FT++
Sbjct: 207 PKILITTSINSTLHEQAHL--LTDLFPNSVYIRRSAHKYAHKYSVREISKFASNRNFTAV 264
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+VV +++ + I+ LP GPT HF +S + K + HGN TGH PEL+LNNF T LG
Sbjct: 265 VVVEEDQKRVSGMTIVHLPVGPTFHFSVSNWIEGKKLPGHGNSTGHWPELILNNFRTPLG 324
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
L ++LFP PE GR+VVT HNQRD+IF R HRY+F K G K+ K
Sbjct: 325 MLSAHLFRTLFPPQPELEGRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGADGKEIK 384
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + T LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 385 ----GVEGIRTGLQELGPRFTLKLRRVDKGIQRASGQEWEW--KGGMEKQRTKFQL 434
>gi|67468832|ref|XP_650412.1| ribosome biogenesis protein [Entamoeba histolytica HM-1:IMSS]
gi|56467034|gb|EAL45026.1| ribosome biogenesis protein, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449708212|gb|EMD47714.1| ribosome biogenesis protein, putative [Entamoeba histolytica KU27]
Length = 311
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 150/277 (54%), Gaps = 22/277 (7%)
Query: 3 PRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T+E+ R D++ V +D+E DE+S+ K G PKI++T+ + F
Sbjct: 50 PQTLESKRIKDDSFVDFKNDEEAVEEIKNDEYSAYYK-GREPKIIVTSTIAAHSNTKKFA 108
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
L + N+ Y++R + KII YAK+ D+T IIV + N +E L II +P GP+ H
Sbjct: 109 YLLSRIFYNAQYFERKQSTMHKIINYAKRNDYTDIIVCNDNHKECTDLYIIHMPCGPSFH 168
Query: 122 FKLSKLVLRKDIKNHGN-PTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
FKL L+ KDIK H T H+P E + F TRLG V R + +LF Q P F+GRRVV
Sbjct: 169 FKLFNLMKPKDIKGHVTVSTWHVPCECLTTGFQTRLGVMVARQLNALFSQKPNFKGRRVV 228
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFH+QRDFIFFRHH Y F+ + A G V + E GPRF LK
Sbjct: 229 TFHSQRDFIFFRHHIYQFDEAKDNFDRAKG--------------PVKCLIDELGPRFILK 274
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEM----DTSRRRFFL 272
L S+Q GT +T E+ + + DTS+ +F L
Sbjct: 275 LRSIQRGTMNTVNPEYIYFRNIDKSNPDDTSKSKFML 311
>gi|167377601|ref|XP_001734460.1| U3 small nucleolar ribonucleoprotein imp4 [Entamoeba dispar SAW760]
gi|165903983|gb|EDR29356.1| U3 small nucleolar ribonucleoprotein imp4, putative [Entamoeba
dispar SAW760]
Length = 311
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 150/277 (54%), Gaps = 22/277 (7%)
Query: 3 PRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T+E+ R D++ V +D+E DE+S+ K G PKI++T+ + F
Sbjct: 50 PQTLESKRIKDDSFVDFQNDEEAVEEIKNDEYSAYYK-GREPKIIVTSTIAAHSNTKKFA 108
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
L + N+ Y++R + KII YAK+ D+T IIV + N +E L II +P GP+ H
Sbjct: 109 YLLSRIFYNAQYFERKQSTMHKIINYAKRNDYTDIIVCNDNHKECTDLYIIHMPCGPSFH 168
Query: 122 FKLSKLVLRKDIKNHGN-PTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
FKL L+ KDIK H T H+P E + F TRLG V R + +LF Q P F+GRRVV
Sbjct: 169 FKLFNLMKPKDIKGHVTVSTWHVPCECLTTGFQTRLGVMVARQLNALFSQKPNFKGRRVV 228
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFH+QRDFIFFRHH Y F+ + A G V + E GPRF LK
Sbjct: 229 TFHSQRDFIFFRHHIYQFDEAKDNFDRAKG--------------PVKCLIDELGPRFILK 274
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEM----DTSRRRFFL 272
L S+Q GT +T E+ + + DTS+ +F L
Sbjct: 275 LRSIQRGTMNTVNPEYIYFRNIDKSNPDDTSKSKFML 311
>gi|400601177|gb|EJP68820.1| brix domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 415
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 141/243 (58%), Gaps = 23/243 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT ++ A + L ++ PNS+Y R + Y L+ I ++ +D+T++
Sbjct: 183 PKILVTTSLNSTLHEEAHL--LTTLFPNSNYIPRSSHRYGHKYSLRDICKFCIGRDYTAV 240
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+++ + ++P + I+ LP GPT HF +S V K + HGNPT H PEL+LNNF T LG
Sbjct: 241 VLLKEDSKKPTGMSIVHLPSGPTFHFSISNWVEGKKLPGHGNPTNHYPELLLNNFKTPLG 300
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
++ Q+LFP +PEF+GR+V+T HNQRD+IF R HRY+F K E A+G+K K
Sbjct: 301 LLTAKIFQTLFPPAPEFQGRQVITLHNQRDYIFVRRHRYVFRDKRATEKSVVAADGEKMK 360
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRR 269
+++ LQE GPRFTLKL + G G E +W K +M+ R+R
Sbjct: 361 GV-------EQIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGDDATQWEWKAKMEKDRKR 412
Query: 270 FFL 272
F L
Sbjct: 413 FNL 415
>gi|407042759|gb|EKE41520.1| ribosome biogenesis protein, putative [Entamoeba nuttalli P19]
Length = 311
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 149/277 (53%), Gaps = 22/277 (7%)
Query: 3 PRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+T+E R D++ V +D+E DE+S+ K G PKI++T+ + F
Sbjct: 50 PQTLETKRIKDDSFVDFKNDEEAVEEIKNDEYSAYYK-GREPKIIVTSTIAAHSNTKKFA 108
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
L + N+ Y++R + KII YAK+ D+T IIV + N +E L II +P GP+ H
Sbjct: 109 YLLSRIFYNAQYFERKQSTMHKIINYAKRNDYTDIIVCNDNHKECTDLYIIHMPCGPSFH 168
Query: 122 FKLSKLVLRKDIKNHGN-PTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
FKL L+ KDIK H T H+P E + F TRLG V R + +LF Q P F+GRRVV
Sbjct: 169 FKLFNLMKPKDIKGHVTVSTWHVPCECLTTGFQTRLGVMVARQLNALFSQKPNFKGRRVV 228
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TFH+QRDFIFFRHH Y F+ + A G V + E GPRF LK
Sbjct: 229 TFHSQRDFIFFRHHIYQFDEAKDNFDRAKG--------------PVKCLIDELGPRFILK 274
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEM----DTSRRRFFL 272
L S+Q GT +T E+ + + DTS+ +F L
Sbjct: 275 LRSIQRGTMNTVNPEYIYFRNIDKSNPDDTSKSKFML 311
>gi|339244457|ref|XP_003378154.1| ribosome production factor 1 [Trichinella spiralis]
gi|316972956|gb|EFV56601.1| ribosome production factor 1 [Trichinella spiralis]
Length = 309
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 114/185 (61%), Gaps = 5/185 (2%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+T+ENTRE DET+ P+D+E + DE + PK+L+TT
Sbjct: 76 PKTLENTREYDETIVLPNDEEEVYEENTDEIAPYFHMKTKPKVLLTTSPKAKVVSWKLCY 135
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
E IPNSH R LK++I A K++T I+VVH +RR P+ L++ LPDGPTA+F
Sbjct: 136 EFHRCIPNSHVIGRKGISLKRLISLANSKNYTDIVVVHEDRRSPNGLVLCHLPDGPTAYF 195
Query: 123 KLSKLVLRKDIKNHGNPTGHI---PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
K+ + L KDIKN G G + PELVLNNF+TRLGH V R++ LFPQ P F GRRVV
Sbjct: 196 KMQNVKLPKDIKNCGK--GAVFGNPELVLNNFSTRLGHTVARMLACLFPQDPHFGGRRVV 253
Query: 180 TFHNQ 184
TFHNQ
Sbjct: 254 TFHNQ 258
>gi|321253709|ref|XP_003192825.1| nucleolar protein; Rpf1p [Cryptococcus gattii WM276]
gi|317459294|gb|ADV21038.1| Nucleolar protein, putative; Rpf1p [Cryptococcus gattii WM276]
Length = 429
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 122/207 (58%), Gaps = 27/207 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKR---GTYDLKKIIEYAKKKDFTSIIVV 99
P+ILITT + F +L +V P ++KR +++ ++ +A K+ + ++IVV
Sbjct: 158 PRILITTSPSPCKQTYQFCDDLKNVFPGGEFFKRPKGKGFEIGRVSRWASKRGYGALIVV 217
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 159
+ + + P+A+ +I LP GPTA+FKLS + L +I H T H PEL+LNNF T LG+ V
Sbjct: 218 NEDHKIPNAVTLINLPSGPTAYFKLSSITLSSNIYGHARSTPHSPELILNNFTTLLGNSV 277
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
GRL SLFP P+FRGR+VVT HNQRDF+FFR HRY+F + S
Sbjct: 278 GRLFGSLFPPQPQFRGRQVVTLHNQRDFLFFRRHRYMFSSATS----------------- 320
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHG 246
+LQE GPRFTLKL L+ G
Sbjct: 321 -------AKLQEIGPRFTLKLRWLRKG 340
>gi|346326815|gb|EGX96411.1| RNA processing factor 1 [Cordyceps militaris CM01]
Length = 411
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 142/244 (58%), Gaps = 23/244 (9%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APKIL+TT ++ A + L ++ PNS+Y R + Y L++I ++ +D+T+
Sbjct: 178 APKILVTTSLNSTLHQEAHL--LTTLFPNSNYIPRSSHRYGHKYSLREICKFCIGRDYTA 235
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++++ + ++P + ++ LP GPT HF +S V K + HGNPT H PEL+LNNF T L
Sbjct: 236 VVLLKEDLKKPTGMSVVHLPSGPTFHFSISNWVEGKKLPGHGNPTNHYPELLLNNFKTPL 295
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKA 212
G ++ Q+LFP +PEF+GR+V+T HNQRD+IF R HRY+F K E +G+K
Sbjct: 296 GLLTAKIFQTLFPPAPEFQGRQVITLHNQRDYIFVRRHRYVFRDKRATEKSVLATDGEKL 355
Query: 213 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRR 268
K +++ LQE GPRFTLKL + G G E +W K +M+ R+
Sbjct: 356 KGV-------EEIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGDDATQWEWKAKMEKDRK 407
Query: 269 RFFL 272
RF L
Sbjct: 408 RFNL 411
>gi|358381069|gb|EHK18745.1| hypothetical protein TRIVIDRAFT_216628, partial [Trichoderma virens
Gv29-8]
Length = 413
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 137/243 (56%), Gaps = 23/243 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT ++ A + L ++ PNS Y R + Y L++I +++ KD+T++
Sbjct: 181 PKILVTTSLNSTLHDEAQL--LCTLFPNSRYIPRSSHRYGYKYSLREICKFSASKDYTAV 238
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+++ + ++P L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 239 VLMKEDLKKPTGLSIVHLPKGPTFHFTISNWIEGKKLPGHGNPTNHYPELMLNNFKTPLG 298
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
+L Q++FP PEF GR+VV HNQRDFIF R RY F K E +DA GK +
Sbjct: 299 LLTAKLFQTMFPPRPEFEGRQVVALHNQRDFIFVRRFRYAFRDKRATEKSVTDAEGKALE 358
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRR 269
+S + LQE GPRFTLKL + G G E E W K +M+ R+R
Sbjct: 359 GVESIRAG-------LQELGPRFTLKLRRVDKG-IGRAGSEGEDATQWEWKSKMEKDRKR 410
Query: 270 FFL 272
F L
Sbjct: 411 FNL 413
>gi|169765241|ref|XP_001817092.1| RNA processing factor 1 [Aspergillus oryzae RIB40]
gi|83764946|dbj|BAE55090.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 432
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 136/239 (56%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A L + PNS Y +R + LK+I +A +++T++
Sbjct: 205 PKILITTSLNSTLHNEA--KALTDLFPNSQYIRRTAHRYSHKFSLKEIATFAANRNYTAV 262
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ + + P L +I LP GP HF +S V K I HG T H PEL+LNNF T LG
Sbjct: 263 LVLQEDSKRPSGLDVIHLPKGPMFHFTISNWVDGKRIPGHGVGTEHWPELILNNFRTPLG 322
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF-ETKESKGS--DANGKKAK 213
G + +SLFP P+ GR+VVT HNQRD+IF R HRYIF E +E++ S DA+GK+ K
Sbjct: 323 IVTGAIFRSLFPPQPDIEGRQVVTLHNQRDYIFVRRHRYIFREKRETEKSVIDADGKEMK 382
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
A+ + LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 383 GAEGIRAG-------LQELGPRFTLKLRRIDKGIQRASGQEWEW--KAGMEKQRTKFQL 432
>gi|408397135|gb|EKJ76285.1| hypothetical protein FPSE_03540 [Fusarium pseudograminearum CS3096]
Length = 415
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 132/240 (55%), Gaps = 17/240 (7%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PK+L+TT ++ A + L PNS Y R Y L++I +YA +++T+I
Sbjct: 183 PKVLVTTSLNSTLHEQANV--LCEFFPNSSYVPRSAHRYGHKYSLREICKYATNREYTAI 240
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
I++ + ++P L ++ LP GPT HF ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 241 ILLKEDSKKPTGLTVVHLPSGPTFHFSITNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 300
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
+L +LFP PEF+GR+V T HNQRD+IF R HRY+F K G K+ K
Sbjct: 301 LLTAKLFMTLFPPKPEFQGRQVTTLHNQRDYIFVRRHRYVFREKRQTEKSIVGADGKEVK 360
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G E +W K +M+ R+RF L
Sbjct: 361 ----GVEGIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGDDATQWEWKAKMEKDRKRFNL 415
>gi|238503460|ref|XP_002382963.1| RNA processing factor 1 [Aspergillus flavus NRRL3357]
gi|220690434|gb|EED46783.1| RNA processing factor 1 [Aspergillus flavus NRRL3357]
gi|391863385|gb|EIT72696.1| ribosome biogenesis protein [Aspergillus oryzae 3.042]
Length = 432
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 136/239 (56%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A L + PNS Y +R + LK+I +A +++T++
Sbjct: 205 PKILITTSLNSTLHNEA--KALTDLFPNSQYIRRTAHRYSHKFSLKEIATFAANRNYTAV 262
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ + + P L +I LP GP HF +S V K I HG T H PEL+LNNF T LG
Sbjct: 263 LVLQEDSKRPSGLDVIHLPKGPMFHFTISNWVDGKRIPGHGVGTEHWPELILNNFRTPLG 322
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF-ETKESKGS--DANGKKAK 213
G + +SLFP P+ GR+VVT HNQRD+IF R HRYIF E +E++ S DA+GK+ K
Sbjct: 323 IVTGAIFRSLFPPQPDIEGRQVVTLHNQRDYIFVRRHRYIFREKRETEKSVIDADGKEMK 382
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
A+ + LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 383 GAEGIRAG-------LQELGPRFTLKLRRIDKGIQRASGQEWEW--KAGMEKQRTKFQL 432
>gi|255943791|ref|XP_002562663.1| Pc20g01020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587398|emb|CAP85431.1| Pc20g01020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 431
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 137/251 (54%), Gaps = 16/251 (6%)
Query: 30 ADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 81
A +F ++ +G PKILITT NS L V PNS Y +R + +
Sbjct: 189 AAKFPTLFTEGPPPTPKILITTG-LNSTLH-VQAETLTDVFPNSVYIRRNAHRYSHKFSI 246
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 141
++I ++A ++FT+++V++ +++ P L I+ LP GPT HF +S + K + HG T
Sbjct: 247 REISKFASNRNFTAVVVLNEDQKRPSGLTIVHLPVGPTFHFSISNWIDGKRLPGHGRATD 306
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
H PEL+LNNF T LG L ++LFP PEF GR+VVT HNQRD+IF R HRY+F K
Sbjct: 307 HWPELILNNFRTPLGLLTAHLFRTLFPPQPEFEGRQVVTLHNQRDYIFVRRHRYVFREKR 366
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G K E + + T LQE GPRFTLKL + G G E+EW K
Sbjct: 367 ETEKAVVGADGK----EMAGAEGIRTGLQELGPRFTLKLRRVDKGIQRASGQEWEW--KG 420
Query: 262 EMDTSRRRFFL 272
M+ +R F L
Sbjct: 421 GMEKTRTLFQL 431
>gi|353227380|emb|CCA77890.1| related to RPF1-involved in the assembly of the large ribosomal
subunit [Piriformospora indica DSM 11827]
Length = 347
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 134/251 (53%), Gaps = 29/251 (11%)
Query: 1 MTPRTIENTREPDETVCRPDDDELFAGND--ADEFSSILKQGCAPKILITTCRFNSNRGP 58
+ P T T + V + L ND A F S PK+LITT +
Sbjct: 75 VNPTTQNTTEDAGHNVDPNQEANLDMDNDPFASYFDSDADPSIPPKVLITTSPKATRTTY 134
Query: 59 AFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLP 115
F EL+ + P + + +R +++ I +A + + ++IVV+ + ++P+ + +I LP
Sbjct: 135 DFCDELVGIFPGAEFIRRKKGKGFEIGVIAGWAAGRGYGAMIVVNEDMKKPNGITLIHLP 194
Query: 116 DGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRG 175
GPTA+FKL+ + L K I H T H PEL+LNNF+TRLGH VGR+ Q+LFP+ PEF G
Sbjct: 195 HGPTAYFKLTSVQLTKQIFGHARATPHNPELILNNFSTRLGHAVGRMFQTLFPRLPEFEG 254
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
R+VVT HNQRDF+FFR HRY F + E LQE GPR
Sbjct: 255 RQVVTLHNQRDFLFFRRHRYAFRSPEKAA------------------------LQEIGPR 290
Query: 236 FTLKLVSLQHG 246
FTLKL L+ G
Sbjct: 291 FTLKLRWLKKG 301
>gi|156065257|ref|XP_001598550.1| hypothetical protein SS1G_00639 [Sclerotinia sclerotiorum 1980]
gi|154691498|gb|EDN91236.1| hypothetical protein SS1G_00639 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 414
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 131/241 (54%), Gaps = 17/241 (7%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APKIL+TT ++ A + L ++ PNS+Y R Y L++I ++A +++TS
Sbjct: 181 APKILVTTSLNSTLHAEAHL--LCTLFPNSNYVPRSAHRYGYKYSLREICKFATNREYTS 238
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++++ + + P L I+ LP GPT HF + V K + HGNPT H PEL+LNNF T L
Sbjct: 239 VVMLKEDAKVPTGLTIVHLPSGPTCHFSIKNWVEGKKLPGHGNPTNHYPELILNNFRTPL 298
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G RL +LFP PE +GR+VVT HNQRD+IF R HRY+F K G K
Sbjct: 299 GLLTARLFLTLFPPQPELQGRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGPDGKIV 358
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFF 271
+ + + LQE GPRFTLKL + G G E +W K M+ R RF
Sbjct: 359 E----GVEGIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGDDAVQWQWKAGMEKQRTRFN 413
Query: 272 L 272
L
Sbjct: 414 L 414
>gi|407922813|gb|EKG15905.1| Anticodon-binding protein [Macrophomina phaseolina MS6]
Length = 419
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 139/250 (55%), Gaps = 16/250 (6%)
Query: 30 ADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS-VIPNSHYYKRGT------YDLK 82
A +F ++ + PKILITT NS +ELL+ + PNS Y +R Y +K
Sbjct: 179 AAKFPALFQPPKEPKILITTG-INSTLHKE--AELLTKLFPNSQYVRRTAHRYGHKYSVK 235
Query: 83 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 142
+I ++A +++T++I++ ++++P L ++ LP+GP HF +S + + HGNPT H
Sbjct: 236 EISKFAANREYTTVIILMEDQKKPSGLDVVHLPNGPMFHFSISNWIEGAKLPGHGNPTEH 295
Query: 143 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKES 202
PEL+LNNF T LG L +++FP PE GR+VVT HNQRD+IF R HRY+F K +
Sbjct: 296 YPELILNNFRTPLGLLTAHLFRTMFPPQPELEGRQVVTLHNQRDYIFVRRHRYVFRDKRA 355
Query: 203 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPE 262
G K K + + LQE GPRFTLKL + G G E++W K
Sbjct: 356 SEKPVVGADGKPMK----GVEDIKAGLQELGPRFTLKLRRIDKGIQKASGQEWQW--KAG 409
Query: 263 MDTSRRRFFL 272
+ R RF L
Sbjct: 410 SEKVRTRFAL 419
>gi|46122177|ref|XP_385642.1| hypothetical protein FG05466.1 [Gibberella zeae PH-1]
Length = 415
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 133/239 (55%), Gaps = 15/239 (6%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PK+L+TT ++ A + L PNS Y R Y L++I +YA +++T+I
Sbjct: 183 PKVLVTTSLNSTLHEQANV--LCEFFPNSSYVPRSAHRYGHKYSLREICKYATNREYTAI 240
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
I++ + ++P L ++ LP GPT HF ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 241 ILLKEDSKKPTGLTVVHLPSGPTFHFSITNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 300
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
+L +LFP PEF+GR+V T HNQRD+IF R HRY+F K G K+ K
Sbjct: 301 LLTAKLFMTLFPPKPEFQGRQVTTLHNQRDYIFVRRHRYVFREKRQTEKSIVGADGKEVK 360
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGT--FDTKGGEF-EWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G + G + +W K +M+ R+RF L
Sbjct: 361 ----GVEGIRAGLQELGPRFTLKLRRVDKGIGRAGSDGDDATQWEWKAKMEKDRKRFNL 415
>gi|154311323|ref|XP_001554991.1| hypothetical protein BC1G_06514 [Botryotinia fuckeliana B05.10]
gi|347829134|emb|CCD44831.1| similar to RNA processing factor 1 [Botryotinia fuckeliana]
Length = 414
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 131/241 (54%), Gaps = 17/241 (7%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APKIL+TT ++ A + L ++ PNS+Y R Y L++I ++A +++TS
Sbjct: 181 APKILLTTSLNSTLHAEAHL--LCTLFPNSNYVPRSAHRYGHKYSLREICKFATNREYTS 238
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++++ + + P L I+ LP GPT HF + V K + HGNPT H PEL+LNNF T L
Sbjct: 239 VVMLKEDAKVPTGLTIVHLPSGPTCHFSIKNWVEGKKLPGHGNPTNHYPELILNNFRTPL 298
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G RL +LFP PE +GR+VVT HNQRD+IF R HRY+F K G K
Sbjct: 299 GLLTARLFLTLFPPQPELQGRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGPDGKIV 358
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFF 271
+ + + LQE GPRFTLKL + G G E +W K M+ R RF
Sbjct: 359 E----GVEGIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGDDAVQWQWKAGMEKQRTRFN 413
Query: 272 L 272
L
Sbjct: 414 L 414
>gi|303319139|ref|XP_003069569.1| Brix domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109255|gb|EER27424.1| Brix domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320041028|gb|EFW22961.1| RNA processing factor 1 [Coccidioides posadasii str. Silveira]
Length = 419
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 134/239 (56%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A I L PNS Y +R + +++I ++A +++T++
Sbjct: 192 PKILITTSLNSTLHDQASI--LTEFFPNSVYIRRSAHRYSHKFSVREISKFASNRNYTAL 249
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+VV +++ L ++ LP GPT HF +S V K + HGNPTGH PEL+LNNF T LG
Sbjct: 250 VVVEEDQKRVSGLTVVHLPVGPTFHFSVSNWVEGKKLPGHGNPTGHWPELILNNFRTPLG 309
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP P+ GR+VVT HNQRD+IF R HRY+F K E DA+G + K
Sbjct: 310 LLTAHLFRTLFPPQPDLIGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKSVVDADGNEIK 369
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 370 GVEG-------IRAGLQELGPRFTLKLRRIDKGIQRRSGQEWEW--KGRMEKQRTKFQL 419
>gi|119182386|ref|XP_001242328.1| hypothetical protein CIMG_06224 [Coccidioides immitis RS]
gi|392865223|gb|EAS31001.2| RNA processing factor 1 [Coccidioides immitis RS]
Length = 423
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 134/239 (56%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A I L PNS Y +R + +++I ++A +++T++
Sbjct: 196 PKILITTSLNSTLHDQASI--LTEFFPNSVYIRRSAHRYSHKFSVREISKFASNRNYTAL 253
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+VV +++ L ++ LP GPT HF +S V K + HGNPTGH PEL+LNNF T LG
Sbjct: 254 VVVEEDQKRVSGLTVVHLPVGPTFHFSVSNWVEGKKLPGHGNPTGHWPELILNNFRTPLG 313
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP P+ GR+VVT HNQRD+IF R HRY+F K E DA+G + K
Sbjct: 314 LLTAHLFRTLFPPQPDLIGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKSVVDADGNEIK 373
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 374 GVEG-------IRAGLQELGPRFTLKLRRIDKGIQRRSGQEWEW--KGRMEKQRTKFQL 423
>gi|440635818|gb|ELR05737.1| hypothetical protein GMDG_07580 [Geomyces destructans 20631-21]
Length = 416
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 135/240 (56%), Gaps = 15/240 (6%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APK+L+TT ++ A + L ++ PNS Y R + +++I ++A +++T+
Sbjct: 183 APKVLLTTSLNSTLHNEAHL--LCTLFPNSTYIPRSAHRYGHKFSVREIAKFATNREYTA 240
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
+IVV + ++P L I+ LP GPT HF ++ V K + HGNPT H PEL+LNNF T L
Sbjct: 241 LIVVKEDAKKPTGLSIVHLPHGPTCHFSIANWVEGKKLPGHGNPTNHYPELILNNFRTPL 300
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G RL +LFP PE +GR+VVT HNQRD+IF R HRY+F K G +
Sbjct: 301 GLLTARLFLTLFPPQPELQGRQVVTLHNQRDYIFVRRHRYVFRDKRPTEKSVVGPDGEKV 360
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGT--FDTKGGE-FEWVHKPEMDTSRRRFFL 272
K +++ LQE GPRFTLKL + G ++G + +W K M+ R RF L
Sbjct: 361 K----GVEEIRAGLQELGPRFTLKLRRVDKGIGRAGSQGDDGLQWEWKAHMEKKRTRFNL 416
>gi|71003301|ref|XP_756331.1| hypothetical protein UM00184.1 [Ustilago maydis 521]
gi|46096336|gb|EAK81569.1| hypothetical protein UM00184.1 [Ustilago maydis 521]
Length = 451
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 122/207 (58%), Gaps = 33/207 (15%)
Query: 54 SNRGPAFISELLSVIPNSHYYKRGTYD---LKKIIEYAKKKDFTSIIVVHTNRREPDALL 110
S R F+ ELLSV P + Y R L KI +A+++ F +++VV +R+EP AL
Sbjct: 171 SERTREFVDELLSVFPGAEYRPRSKAQGVGLGKICGWARERRFGAVLVVGESRKEPFALT 230
Query: 111 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 170
+I LP GPTA F+LS + +I PT H PEL+LNNF T LGHRVG+++Q LFP+
Sbjct: 231 VISLPHGPTAFFRLSSISTGDEIYGKARPTPHTPELILNNFTTVLGHRVGKVLQCLFPKI 290
Query: 171 PEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ 230
P+ GR+VVT HNQRD+IFFR HRY+F++ D+K T LQ
Sbjct: 291 PQLEGRQVVTCHNQRDYIFFRRHRYMFKS--------------DSK----------TALQ 326
Query: 231 ECGPRFTLKLVSLQH------GTFDTK 251
E GPRFTLKL SL+ G +D K
Sbjct: 327 EIGPRFTLKLHSLKESLPKGAGVWDGK 353
>gi|302818007|ref|XP_002990678.1| hypothetical protein SELMODRAFT_185462 [Selaginella moellendorffii]
gi|300141600|gb|EFJ08310.1| hypothetical protein SELMODRAFT_185462 [Selaginella moellendorffii]
Length = 291
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 143/269 (53%), Gaps = 42/269 (15%)
Query: 7 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 66
ENT EP V DD+ +AG PKIL+TT R S+R F+ EL
Sbjct: 62 ENTAEPTTHV---DDEYAYAGE------------VDPKILLTTSRDPSSRLTQFVKELKI 106
Query: 67 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 126
V PN+ RG + +I+E + DFT II+VH +R EPD L++ LP GPTA+F L
Sbjct: 107 VFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMN 166
Query: 127 LVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
+V R DIK+ G + P L+LNNF T+LG R +++ LFP P+ +R++TF N
Sbjct: 167 VVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFP-VPKPDSKRLITFAN 225
Query: 184 QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
Q+D+I FRHH Y EK K I L+E GPRF L+L +
Sbjct: 226 QQDYISFRHHVY----------------------EKQGGVKSI-ELKEVGPRFELRLYQI 262
Query: 244 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ GT D + EWV +P M++SR+R L
Sbjct: 263 KLGTVDQVEAQNEWVIRPYMNSSRKRAAL 291
>gi|67903694|ref|XP_682103.1| hypothetical protein AN8834.2 [Aspergillus nidulans FGSC A4]
gi|40740932|gb|EAA60122.1| hypothetical protein AN8834.2 [Aspergillus nidulans FGSC A4]
gi|259482955|tpe|CBF77923.1| TPA: RNA processing factor 1 (AFU_orthologue; AFUA_5G05930)
[Aspergillus nidulans FGSC A4]
Length = 435
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 135/239 (56%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A I L + PNS Y +R + +++I ++A +++T++
Sbjct: 208 PKILITTSLNSTLHHEAEI--LTQLFPNSVYIRRTAHAHAHKFSIREIAKFASNREYTTL 265
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
I++ + ++P L I+ LP GP HF +S V K I HG PT H PEL+LNNF T LG
Sbjct: 266 IILQEDSKKPAGLDIVHLPKGPMFHFSISNWVEGKKIPGHGKPTEHWPELILNNFRTPLG 325
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP P+ GR+VVT HNQRD+IF R HRY+F K E A+GK+ K
Sbjct: 326 LLTAHLFRTLFPPQPDIEGRQVVTLHNQRDYIFVRRHRYVFREKRETEKAVVGADGKEIK 385
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
A+ + T LQE GPRFTLKL + G G E+EW K +M+ R F L
Sbjct: 386 GAEG-------IRTGLQELGPRFTLKLRRVDKGIQRASGQEWEW--KGKMEKKRTLFQL 435
>gi|388852488|emb|CCF53890.1| related to RPF1-involved in the assembly of the large ribosomal
subunit [Ustilago hordei]
Length = 453
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 124/215 (57%), Gaps = 33/215 (15%)
Query: 60 FISELLSVIPNSHYYKRGTYD---LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F+ ELLSV P + Y R L KI +A+++ F +++VV+ + + P AL +I LP
Sbjct: 179 FVDELLSVFPGAEYRPRSKAQGVGLGKICGWARERRFDAVLVVNESHKAPFALTVIQLPY 238
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPTA F+L+ ++ +I PT H PEL+LNNF T LGHRVG ++QSLFP+ P+ GR
Sbjct: 239 GPTAFFRLTSILSGAEIYGKARPTPHTPELILNNFTTILGHRVGTVLQSLFPKIPQLEGR 298
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
+VVT HNQRD+IFFR HRY+F+ E T LQE GPRF
Sbjct: 299 QVVTCHNQRDYIFFRRHRYMFKNAEK------------------------TALQEIGPRF 334
Query: 237 TLKLVSLQH------GTFDTKGGEFEWVHKPEMDT 265
TLKL SL+ G +D K GE + K E+D
Sbjct: 335 TLKLHSLKEGLPKGAGVWDGKYGEEYELTKEEVDA 369
>gi|340515742|gb|EGR45994.1| upstream activation factor subunit [Trichoderma reesei QM6a]
Length = 416
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 137/243 (56%), Gaps = 23/243 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT ++ A + + ++ PN++Y R + Y L+ I +++ +D+T++
Sbjct: 184 PKILVTTSLNSTIHDEAQL--ICTLFPNANYIPRSSHRYGYKYSLRDICKFSASRDYTAV 241
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
++V ++++P L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 242 VLVKEDQKKPTGLSIVHLPKGPTFHFSISNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 301
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
+L Q++FP PEF GR+VV HNQRD+IF R RY F K E DA GK +
Sbjct: 302 LLTAKLFQTMFPPRPEFEGRQVVALHNQRDYIFVRRFRYAFRDKRPTEKSVVDAEGKALQ 361
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRR 269
++ + LQE GPRFTLKL + G G E +W K +M+ R+R
Sbjct: 362 GVENIRAG-------LQELGPRFTLKLRRVDKGV-GRAGSEGEDAIQWEWKSKMEKDRKR 413
Query: 270 FFL 272
F L
Sbjct: 414 FNL 416
>gi|358396279|gb|EHK45660.1| hypothetical protein TRIATDRAFT_41214 [Trichoderma atroviride IMI
206040]
Length = 414
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 137/243 (56%), Gaps = 23/243 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT ++ A I L ++ PNS+Y R + Y L++I +++ ++ +T++
Sbjct: 182 PKILVTTSLNSTLHDEAHI--LTTLFPNSNYVPRSSHRYGHKYSLREICKFSAERGYTAV 239
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
I++ ++++P L ++ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 240 ILMKEDQKKPTGLSVVHLPKGPTFHFSISNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 299
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
+L Q++FP PEF GR+V HNQRD+IF R RY+F K E DA G K
Sbjct: 300 LLAAKLFQTMFPPRPEFEGRQVTALHNQRDYIFVRRFRYVFRDKRATEKSVVDAEGNPLK 359
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRR 269
++ + LQE GPRFTLKL + G G E +W K +M+ R+R
Sbjct: 360 GVEAIRAG-------LQELGPRFTLKLRRVDKGV-GRAGSEGDDAIQWEWKSKMEKDRKR 411
Query: 270 FFL 272
F L
Sbjct: 412 FNL 414
>gi|406864938|gb|EKD17981.1| brix domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 412
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 132/241 (54%), Gaps = 17/241 (7%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APKIL+TT ++ A + L ++ PN++Y R + L++I ++A +++TS
Sbjct: 179 APKILLTTSINSTLHHEANL--LCTLFPNTNYIPRSAHRFGHKFSLREISKFAANRNYTS 236
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
+I++ + ++P L I+ LP GPT HF ++ V K + HGNPT H PEL+LNNF T L
Sbjct: 237 VILLKEDSKKPTGLTIVHLPSGPTCHFSIANWVDGKKLPGHGNPTNHYPELILNNFRTPL 296
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G RL +LFP PE +GR+VVT HNQRD+IF R HRY+F K G K
Sbjct: 297 GLLTARLFLTLFPPQPELQGRQVVTLHNQRDYIFLRRHRYVFREKRETEKSVVGPDGKIV 356
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFF 271
+ + LQE GPRFTLKL + G G E E W K M+ R RF
Sbjct: 357 ----PGVEGIRAGLQELGPRFTLKLRRVDKGV-GRAGSEGEDAVQWQWKAHMEKQRTRFN 411
Query: 272 L 272
L
Sbjct: 412 L 412
>gi|378730455|gb|EHY56914.1| brix-domain ribosomal biogenesis protein [Exophiala dermatitidis
NIH/UT8656]
Length = 446
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 132/235 (56%), Gaps = 14/235 (5%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSII 97
KILITT ++ A I L S+ PNS Y +R + + +++I +A + +T++I
Sbjct: 220 KILITTSINSTLHDEAAI--LTSLFPNSKYIRRSSHRYGYKFSVREISSFAHNQGYTAVI 277
Query: 98 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGH 157
V+ +++ P + ++ LP GPT HF +S K I HG T H PEL+LNNF T LG
Sbjct: 278 VLEEDQKRPSGMTVVHLPQGPTFHFSISNWYTGKAIPGHGRATDHKPELILNNFTTPLGL 337
Query: 158 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKS 217
L +SLFP +P+ +GR+V+T HNQRD+IF R HRYIF K G K+ K
Sbjct: 338 VTAHLFRSLFPATPQLQGRQVLTLHNQRDYIFVRRHRYIFREKRETEKSVVGPDGKEVK- 396
Query: 218 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G ++EW K +M+ +R +F L
Sbjct: 397 ---GVEGIRAGLQELGPRFTLKLRRVDKGIQRRSGQDWEW--KAKMEKTRTKFQL 446
>gi|327300909|ref|XP_003235147.1| RNA processing factor 1 [Trichophyton rubrum CBS 118892]
gi|326462499|gb|EGD87952.1| RNA processing factor 1 [Trichophyton rubrum CBS 118892]
Length = 432
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 133/239 (55%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 205 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYGHKFSVREISSFAANRNYTAV 262
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 263 VVLEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLG 322
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP PEF+GR+VVT HNQRD+IF R HRY+F K E DANG + K
Sbjct: 323 LLTAHLFRTLFPPQPEFQGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKCVVDANGVEMK 382
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G ++EW K M+ R +F L
Sbjct: 383 GVEG-------IRAGLQELGPRFTLKLRRIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 432
>gi|302505473|ref|XP_003014443.1| hypothetical protein ARB_07005 [Arthroderma benhamiae CBS 112371]
gi|291178264|gb|EFE34054.1| hypothetical protein ARB_07005 [Arthroderma benhamiae CBS 112371]
Length = 437
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 133/239 (55%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 210 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYGHKFSVREISSFAANRNYTAV 267
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 268 VVLEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLG 327
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP PEF+GR+VVT HNQRD+IF R HRY+F K E DANG + K
Sbjct: 328 LLTAHLFRTLFPPQPEFQGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKCVVDANGVEMK 387
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G ++EW K M+ R +F L
Sbjct: 388 GVEG-------IRAGLQELGPRFTLKLRRIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 437
>gi|332029526|gb|EGI69415.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Acromyrmex
echinatior]
Length = 312
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 132/231 (57%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PDAL+I LP GPTA+F LS +V+R DI + G + P L+ +NF T+LG RV +
Sbjct: 154 RGVPDALVICHLPYGPTAYFTLSGVVMRHDIPDIGTMSEQYPHLIFHNFKTKLGVRVTNI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV++F N D+I FRHH Y K+++G +
Sbjct: 214 LKYLFP-VPKEDSKRVISFANHDDYICFRHHTY----KKTQGKN---------------- 252
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 272
L E GPRF +KL ++ GT DT+ + EW +P M+TS +R FL
Sbjct: 253 ----IELTEVGPRFQMKLYEIKLGTLDTESAADTEWALRPYMNTSHKRRFL 299
>gi|296808931|ref|XP_002844804.1| brix domain-containing protein [Arthroderma otae CBS 113480]
gi|238844287|gb|EEQ33949.1| brix domain-containing protein [Arthroderma otae CBS 113480]
Length = 431
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 133/239 (55%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 204 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYSHKFSIREISSFAANRNYTAV 261
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ + + L I+ LP GPT HF +S V K + HGNPT H PEL+LNNF T LG
Sbjct: 262 VVLEEDLKRVSGLTIVHLPIGPTFHFSISNWVEGKRLPGHGNPTSHWPELILNNFRTPLG 321
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP P+ +GR+VVT HNQRD+IF R HRYIF K E + DANG + K
Sbjct: 322 LLTAHLFRTLFPPQPDLQGRQVVTLHNQRDYIFVRRHRYIFRDKRETEKRVVDANGVEMK 381
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G ++EW K M+ R +F L
Sbjct: 382 GVEGIRAG-------LQELGPRFTLKLRRIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 431
>gi|302664277|ref|XP_003023771.1| hypothetical protein TRV_02083 [Trichophyton verrucosum HKI 0517]
gi|291187784|gb|EFE43153.1| hypothetical protein TRV_02083 [Trichophyton verrucosum HKI 0517]
Length = 437
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 133/239 (55%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 210 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYGHKFSVREISSFAANRNYTAV 267
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 268 VVLEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLG 327
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP PEF+GR+VVT HNQRD+IF R HRY+F K E DANG + K
Sbjct: 328 LLTAHLFRTLFPPQPEFQGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKCVVDANGVEMK 387
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G ++EW K M+ R +F L
Sbjct: 388 GVEG-------IRAGLQELGPRFTLKLRRIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 437
>gi|315048631|ref|XP_003173690.1| brix domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311341657|gb|EFR00860.1| brix domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 426
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 133/239 (55%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A + L P+S Y +R + +++I +A +++T++
Sbjct: 199 PKILITTSLNSTLHKEAKV--LTEFFPSSVYIRRSAHRYGHKFSVREISAFAANRNYTAV 256
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+VV + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 257 VVVEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTNHWPELILNNFRTPLG 316
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP PEF+GR+VVT HNQRD+IF R HRY+F K E DANG + K
Sbjct: 317 LLTAHLFRTLFPPQPEFQGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKCVVDANGVEMK 376
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G ++EW K M+ R +F L
Sbjct: 377 GVEGIRAG-------LQELGPRFTLKLRRIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 426
>gi|443896062|dbj|GAC73406.1| ribosome biogenesis protein RPF1 [Pseudozyma antarctica T-34]
Length = 439
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 122/207 (58%), Gaps = 33/207 (15%)
Query: 54 SNRGPAFISELLSVIPNSHYYKRGTYD---LKKIIEYAKKKDFTSIIVVHTNRREPDALL 110
S R F+ ELLSV P + Y R L KI +A+++ + +++VV +R+EP AL
Sbjct: 172 SERTREFVDELLSVFPGAEYRPRAKAQGVGLGKICGWARERRYDAVLVVGESRKEPFALT 231
Query: 111 IIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQS 170
+I LP GPTA F+L+ + +I PT H PEL+LNNF T LGHRVG+++Q LFP+
Sbjct: 232 VIQLPHGPTAFFRLTSISTGAEIYGKARPTPHTPELILNNFTTVLGHRVGKVMQGLFPKI 291
Query: 171 PEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQ 230
P+ GR+VVT HNQRD+IFFR HRY+F++ D+K T LQ
Sbjct: 292 PQLEGRQVVTCHNQRDYIFFRRHRYMFKS--------------DSK----------TALQ 327
Query: 231 ECGPRFTLKLVSLQH------GTFDTK 251
E GPRFTLKL SL+ G +D K
Sbjct: 328 EIGPRFTLKLHSLKESLPKGAGVWDGK 354
>gi|66514411|ref|XP_395323.2| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Apis mellifera]
Length = 311
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 129/231 (55%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD+++I LP GPTA+F +S +++R DI N G + P L+ +NF T+LG RV +
Sbjct: 154 RGIPDSIIICHLPYGPTAYFTMSDVIMRHDIPNIGTMSEQYPHLIFHNFKTKLGERVMNI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R++TF N D+I FRHH Y K+ G D
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHHTY----KKIYGKD---------------- 252
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 272
L E GPRF L+L ++ GT D + + EW +P M+TS +R FL
Sbjct: 253 ----IELSEVGPRFQLRLYEIKLGTLDAEAAADIEWALRPYMNTSHKRRFL 299
>gi|358334226|dbj|GAA33543.2| ribosome production factor 1 [Clonorchis sinensis]
Length = 322
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 155/293 (52%), Gaps = 37/293 (12%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDA--------------DEFSSILKQGCAPKILIT 48
P+T+E R DET D +L A A DE + I + PK+L+T
Sbjct: 44 PQTLETLRTYDETTIVETDPDLIAEEQAVSFNCANFPYHFLQDEVADIFRNERTPKLLLT 103
Query: 49 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 108
R F EL +IPN R LKKII A + FT+++VV+ ++++ +
Sbjct: 104 FSDRVCPRTIGFCKELTKIIPNMRIAPRWHLPLKKIIPKAIEHGFTALLVVNEDQKKVNT 163
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT----GHIPELVLNNFATRLGHRVGRLIQ 164
L++ LP+GPT F+LS + LR++++ P +P L+ + F TRLG R RLI
Sbjct: 164 LVVSHLPEGPTVTFRLSNVRLRREMRGRRRPKDIEPDVVPHLITSRFTTRLGRRTERLIT 223
Query: 165 SLFP----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
SLFP +PE R VV FHNQRDFIFFRH RY + + + AN K + KS
Sbjct: 224 SLFPDRSRSTPEGHSRTVV-FHNQRDFIFFRHFRY-----QQRTAHANEKNKEPGKS--- 274
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
+ E GPRFTLKL S+Q GTFDT+ G++EWV K E+ +RR F +
Sbjct: 275 -----YVAMNEVGPRFTLKLRSIQQGTFDTQFGDYEWVRKRSEVGRNRRTFVM 322
>gi|403223058|dbj|BAM41189.1| RNA processing factor [Theileria orientalis strain Shintoku]
Length = 180
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 120/204 (58%), Gaps = 36/204 (17%)
Query: 81 LKKIIEYAKKKDFTSIIVV-HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 139
+K+++++A K DFTSI++V + + P+ L I LP+GPT FKL+ + ++K G
Sbjct: 1 MKEVVKFAIKNDFTSILLVTEGSNKMPNGLFICSLPEGPTTFFKLTSIKFASEMKGGGVL 60
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLFP-----------QSPEFRGRRVVTFHNQRDFI 188
PE+VLN+F TRLG R+GR I SLF QSPEF GRRV+TFHNQRD I
Sbjct: 61 VATKPEIVLNSFNTRLGRRIGRQIASLFSLVSGQQITNAYQSPEFEGRRVITFHNQRDMI 120
Query: 189 FFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
FFRHHRY+F N KK L+E GPRFT+K+ +Q G F
Sbjct: 121 FFRHHRYVFR---------NEKKCS---------------LKEIGPRFTMKVYYVQDGLF 156
Query: 249 DTKGGEFEWVHKPEMDTSRRRFFL 272
D GG +E++ +P++ R+RFF+
Sbjct: 157 DLDGGLYEFIWRPDLQVDRKRFFI 180
>gi|342874830|gb|EGU76749.1| hypothetical protein FOXB_12770 [Fusarium oxysporum Fo5176]
Length = 686
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 127/233 (54%), Gaps = 17/233 (7%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT ++ A + L PNS Y R Y L++I +YA ++ T++
Sbjct: 183 PKILVTTSINSTLHEQAHV--LCEFFPNSSYVPRSAHRYGHKYSLREICKYASNREHTAV 240
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
I++ + ++P L ++ LP GPT HF ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 241 ILLKEDSKKPTGLAVVHLPSGPTFHFSITNWIEGKKLPGHGNPTNHYPELLLNNFKTPLG 300
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
+L +LFP PEF+GR+V T HNQRD+IF R HRY+F K G K+ K
Sbjct: 301 LLTAKLFMTLFPPKPEFQGRQVTTLHNQRDYIFVRRHRYVFREKRQTEKSIVGADGKEVK 360
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSL-----QHGTFDTKGGEFEWVHKPEMD 264
+ + LQE GPRFTLKL + + G+ ++EW K E D
Sbjct: 361 ----GVEGIRAGLQELGPRFTLKLRRVDKGIGRAGSEGDDATQWEWKAKMEKD 409
>gi|323507696|emb|CBQ67567.1| related to RPF1-involved in the assembly of the large ribosomal
subunit [Sporisorium reilianum SRZ2]
Length = 436
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 121/201 (60%), Gaps = 33/201 (16%)
Query: 60 FISELLSVIPNSHYYKRGTYD---LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F+ ELLSV P + Y R L KI +A+++ F +++VV +R+EP AL +I LP
Sbjct: 175 FVYELLSVFPGAEYRPRAKAQGVGLGKICGWARERRFGAVLVVGESRKEPFALTLIQLPH 234
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPTA F+L+ + +I +PT H PEL+LNNF T LGHRVG ++QSLFP+ P+ GR
Sbjct: 235 GPTAFFRLTSIRTADEIYGKAHPTPHTPELILNNFTTVLGHRVGTVLQSLFPKIPQLEGR 294
Query: 177 RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRF 236
+VVT HNQRD+IFFR HRY+F++ D+K T LQE GPRF
Sbjct: 295 QVVTCHNQRDYIFFRRHRYMFKS--------------DSK----------TALQEIGPRF 330
Query: 237 TLKLVSLQH------GTFDTK 251
TLKL SL+ G +D K
Sbjct: 331 TLKLHSLKESLPKGAGVWDGK 351
>gi|405974342|gb|EKC38995.1| hypothetical protein CGI_10018826 [Crassostrea gigas]
Length = 340
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 134/231 (58%), Gaps = 25/231 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S++ F E+ + PNS RG Y++K+++E + D T +I++H +
Sbjct: 131 PKIMITTSRDPSSKLKQFAKEVRLIFPNSQRINRGNYEVKQLVEACRSNDVTDLILLHEH 190
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F LS +V+R DI + G + P L+ +NF++RLG+RV +
Sbjct: 191 RGVPDGLIVCHLPFGPTAYFTLSNVVMRHDIPDVGTMSEQFPHLIFHNFSSRLGNRVKSI 250
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N DFI FRHH Y KK ++ K
Sbjct: 251 LKYLFP-VPKEESKRVITFANDDDFISFRHHVY--------------KKTENGKD----- 290
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
LQE GPRF +K+ + GT + + EWV++P M+T+++R FL
Sbjct: 291 ----IELQEVGPRFEMKIYQIILGTIENVDTADTEWVYRPYMNTTKKRKFL 337
>gi|322800158|gb|EFZ21243.1| hypothetical protein SINV_01837 [Solenopsis invicta]
Length = 311
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 130/231 (56%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 95 PKIVVTTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 154
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PDAL+I LP GPTA+F LS +++R DI G + P L+ +NF T+LG RV +
Sbjct: 155 RGVPDALVICHLPYGPTAYFTLSGVIMRHDIPEIGTMSEQYPHLIFHNFKTKLGERVMSI 214
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV++F N D+I FRHH Y K++ G +
Sbjct: 215 LKYLFP-VPKEDSKRVISFANHDDYICFRHHTY----KKTHGKN---------------- 253
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 272
L E GPRF +KL ++ GT DT+ + EW +P M+TS +R FL
Sbjct: 254 ----IELTEVGPRFQMKLYEIKLGTLDTESAADTEWALRPYMNTSHKRRFL 300
>gi|326468705|gb|EGD92714.1| RNA processing factor 1 [Trichophyton tonsurans CBS 112818]
Length = 432
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 132/239 (55%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A + L PNS Y +R + +++I +A +++T++
Sbjct: 205 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRRSAHRYGHKFSVREISSFAANRNYTAV 262
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 263 VVLEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLG 322
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP PE +GR+VVT HNQRD+IF R HRY+F K E DANG + K
Sbjct: 323 LLTAHLFRTLFPPQPELQGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKCVVDANGVEMK 382
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G ++EW K M+ R +F L
Sbjct: 383 GVEGIRAG-------LQELGPRFTLKLRRIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 432
>gi|260814243|ref|XP_002601825.1| hypothetical protein BRAFLDRAFT_279143 [Branchiostoma floridae]
gi|229287127|gb|EEN57837.1| hypothetical protein BRAFLDRAFT_279143 [Branchiostoma floridae]
Length = 290
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F E+ V PN+ RG Y+L++++E + D T I++ +
Sbjct: 83 PKVMLTTSRDPSSRLKQFAKEMRLVFPNAQRLNRGHYELEQLVEACRANDVTDFIILTEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD ++I LP GPTA+F L V+R DI N G + P L+ NNF+++LG RV +
Sbjct: 143 RGEPDGIIISHLPYGPTAYFTLMNTVMRHDIPNIGTMSEQYPHLIFNNFSSKLGERVKSI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ DFI FRHH Y +KT
Sbjct: 203 LKYLFP-VPKEDSRRVMTFANQDDFISFRHHTY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRF ++L S++ GT D + EW +P M+T+++R FL
Sbjct: 240 RNI--ELQEVGPRFEMRLYSIKLGTLDQVAAADTEWQLRPYMNTAKKRKFL 288
>gi|452840955|gb|EME42892.1| hypothetical protein DOTSEDRAFT_173396 [Dothistroma septosporum
NZE10]
Length = 439
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 130/240 (54%), Gaps = 16/240 (6%)
Query: 41 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKK--KD 92
C PK+L+TT ++ A + L ++ PN Y KR Y +++I YA + +
Sbjct: 208 CEPKVLLTTSLNSTLHHEAEL--LTTLFPNCAYIKRTANFHSYKYSIREIASYAAQPERG 265
Query: 93 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 152
+T I+V++ + ++P L I+ LP GP HF +S + + HGNPT H PEL+LN F
Sbjct: 266 YTHIVVLNEDLKKPKGLDIVHLPHGPMFHFSISNWIPGSRLPGHGNPTNHYPELILNGFK 325
Query: 153 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKA 212
T LG L +SLFP PE +GR+VVT HNQRD+IF R HRY+F K+S G
Sbjct: 326 TPLGLLAAHLFKSLFPPRPEIQGRQVVTLHNQRDYIFVRRHRYVFRDKKSSEKVIQGTDG 385
Query: 213 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K K + + LQE GPRFTLKL + G G E+EW K + R RF L
Sbjct: 386 KPMK----GAEDIRAGLQELGPRFTLKLRRVDKGIQRASGQEWEW--KAGDEKVRTRFSL 439
>gi|121712628|ref|XP_001273925.1| RNA processing factor 1 [Aspergillus clavatus NRRL 1]
gi|119402078|gb|EAW12499.1| RNA processing factor 1 [Aspergillus clavatus NRRL 1]
Length = 436
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 132/251 (52%), Gaps = 16/251 (6%)
Query: 30 ADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDL 81
A +F S+ PKILITT ++ A L + PNS Y +R + +
Sbjct: 194 AAKFPSLFSSEAPPTPKILITTSLNSTLHNEA--ESLTDLFPNSVYIRRTAHRYSHKFSI 251
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 141
++I +A ++FT+++VV +++ P L I+ LP GPT HF +S+ V K + HGN T
Sbjct: 252 REIASFASNRNFTAVVVVQEDQKRPSGLTIVHLPKGPTFHFTISRWVEGKRLPGHGNATD 311
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
H PEL+LNNF T LG L +++FP PE GR+VVT HNQRD++F R HRY+F K
Sbjct: 312 HWPELILNNFRTPLGLLTAHLFRTMFPPQPELEGRQVVTIHNQRDYLFLRRHRYVFREKR 371
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G K+ K + + LQE GP +KL + G G E+EW K
Sbjct: 372 ETEKSVVGTDGKEIK----GVEGIRAGLQELGPAINMKLRRVDKGIQRASGQEWEW--KG 425
Query: 262 EMDTSRRRFFL 272
M+ R +F L
Sbjct: 426 GMEKQRTKFQL 436
>gi|449301681|gb|EMC97692.1| hypothetical protein BAUCODRAFT_462868 [Baudoinia compniacensis
UAMH 10762]
Length = 432
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 128/221 (57%), Gaps = 12/221 (5%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PK+LITT ++ A + L S+ P+S Y KR Y +++I YA K +T +
Sbjct: 205 PKVLITTSINSTLHWEAQL--LTSIFPSSTYIKRTAHFHSYKYSVREICAYATNKAYTHV 262
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+++ + + P L I+ LP GP HF +S + + HGNPT H PEL+LN F T LG
Sbjct: 263 VILTEDLKRPKGLDIVHLPAGPMFHFSISHWIEGAKLPGHGNPTNHYPELILNGFRTPLG 322
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
L +SLFP PE +GR+VVT HNQRD+IFFR HRY+F ++ KGS+ + + A D K
Sbjct: 323 LLTAHLFKSLFPPRPEIQGRQVVTLHNQRDYIFFRRHRYVF--RDRKGSEKSIQGA-DGK 379
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
+ + + LQE GPRFTLKL + G G E+EW
Sbjct: 380 PMQ-GVEGIRAGLQELGPRFTLKLRRVDRGIQRRSGQEWEW 419
>gi|299745085|ref|XP_001831462.2| ribosome production factor 1 [Coprinopsis cinerea okayama7#130]
gi|298406426|gb|EAU90309.2| ribosome production factor 1 [Coprinopsis cinerea okayama7#130]
Length = 456
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 132/268 (49%), Gaps = 63/268 (23%)
Query: 3 PRTIENTREPDETVCRPDDDELFA---GND------------------ADEFSSILKQGC 41
PRT++NTRE D ++ D + A GN A F+SI
Sbjct: 59 PRTLDNTREFDPSILTADPTQPEASGSGNGESSTAHEERAADIATDPFASYFNSIDDPSI 118
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIV 98
PKILITT S F EL+ V P + + +R +++ +I + +D
Sbjct: 119 PPKILITTSPKASKATYNFCDELVGVFPGAEFRQRKKGKGFEMGRIAGWCADRD------ 172
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
A+ ++ LPDGPTA+FKL+ + L K I H T H PELVLN F TRLGH
Sbjct: 173 ---------AITLVHLPDGPTAYFKLTSVELTKQIYGHARATPHHPELVLNGFVTRLGHA 223
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
VGR+ Q+ FP PEF+GR+VVT HNQRDFIFFR HRY F + E
Sbjct: 224 VGRMFQTAFPPLPEFQGRQVVTLHNQRDFIFFRRHRYAFRSPEKVA-------------- 269
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHG 246
LQE GPRFTLKL SL+ G
Sbjct: 270 ----------LQEIGPRFTLKLRSLKKG 287
>gi|380020454|ref|XP_003694098.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Apis florea]
Length = 311
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 128/231 (55%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD+++I LP GPTA+F +S +++R DI N G + P L+ +NF T+LG RV +
Sbjct: 154 RGVPDSIIICHLPYGPTAYFTMSDVIMRHDIPNIGTMSEQYPHLIFHNFKTKLGERVMNI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R++TF N D+I FRHH K+ G D
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHH----TCKKIHGKD---------------- 252
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 272
L E GPRF L+L ++ GT D + + EW +P M+TS +R FL
Sbjct: 253 ----IELSEVGPRFQLRLYEIKLGTLDAEAAADIEWALRPYMNTSHKRRFL 299
>gi|156396614|ref|XP_001637488.1| predicted protein [Nematostella vectensis]
gi|156224600|gb|EDO45425.1| predicted protein [Nematostella vectensis]
Length = 289
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 125/227 (55%), Gaps = 26/227 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT S+R F E+ V PNS RG Y +K++++ K D T +I+VH +
Sbjct: 83 PKIMITTSHNPSSRLKQFAKEMRLVFPNSQRLNRGNYVMKQLVDACKANDVTDLIIVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD L++ LP GPTA+F LS V+R DI G + P L+ +NF ++LG RV +
Sbjct: 143 RGEPDGLVVCHLPFGPTAYFTLSSTVMRHDIPKIGTMSEAYPHLIFHNFKSKLGDRVRNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRVVTF NQ D+I FRHH Y K D + E
Sbjct: 203 LKYLFP-VPKEDTRRVVTFANQSDYISFRHHTY---------------KKVDGQIE---- 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L E GPRF +K+ ++ GT D E EW KP M+TS++R
Sbjct: 243 ------LSEVGPRFEMKVYEIKLGTVDQIEAETEWRLKPYMNTSKKR 283
>gi|15222534|ref|NP_176564.1| Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
gi|12324948|gb|AAG52427.1|AC011622_15 putative U3 small nucleolar ribonucleoprotein protein; 1537-3735
[Arabidopsis thaliana]
gi|12325007|gb|AAG52449.1|AC010852_6 putative U3 small nucleolar ribonucleoprotein protein; 73469-75667
[Arabidopsis thaliana]
gi|20260206|gb|AAM13001.1| putative U3 small nucleolar ribonucleoprotein protein [Arabidopsis
thaliana]
gi|21387041|gb|AAM47924.1| putative U3 small nucleolar ribonucleoprotein protein [Arabidopsis
thaliana]
gi|21593725|gb|AAM65692.1| putative U3 small nucleolar ribonucleoprotein [Arabidopsis
thaliana]
gi|332196027|gb|AEE34148.1| Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
Length = 294
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 137/255 (53%), Gaps = 37/255 (14%)
Query: 21 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 80
DDE +AD PKIL+TT R S F EL V PNS RG+
Sbjct: 72 DDEYANATEAD-----------PKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGSQV 120
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHG 137
+ +IIE A+ DFT +I+VH +R PD L+I LP GPTA+F L +V R DI K+ G
Sbjct: 121 ISEIIETARSHDFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKSIG 180
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
P L+ NNF T++G RVG +++ +FP +P+ +R+VTF NQ D+I FR+H Y
Sbjct: 181 KMPEQYPHLIFNNFTTQMGQRVGNILKHIFP-APKLDAKRIVTFSNQSDYISFRNHVY-- 237
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
KG G K+ L+E GPRF L+L ++ GT + E EW
Sbjct: 238 ----DKGE--GGPKS--------------IELKEIGPRFELRLYQVKLGTVEQNEAEIEW 277
Query: 258 VHKPEMDTSRRRFFL 272
V +P M+TS++R F+
Sbjct: 278 VIRPYMNTSKKRKFI 292
>gi|340726760|ref|XP_003401721.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Bombus terrestris]
Length = 311
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 129/231 (55%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P++L+I LP GPTA+F +S +++R DI + G + P L+ +NF T+LG RV +
Sbjct: 154 RGVPNSLIICHLPYGPTAYFTMSDVIMRHDIPDIGTMSEQYPHLIFHNFKTKLGERVMSI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R++TF N D+I FRHH Y K+ G D
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHHTY----KKIHGKD---------------- 252
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT D + + EW +P M+TS +R FL
Sbjct: 253 ----IELVEVGPRFQLKLYQIKLGTLDAEAAADTEWALRPYMNTSHKRRFL 299
>gi|326481314|gb|EGE05324.1| RNA processing factor 1 [Trichophyton equinum CBS 127.97]
Length = 432
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 131/239 (54%), Gaps = 20/239 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL------KKIIEYAKKKDFTSI 96
PKILITT ++ A + L PNS Y + D+ ++I +A +++T++
Sbjct: 205 PKILITTSLNSTLHKEAKV--LTEFFPNSVYIRARRIDMAHKFSVREISSFAANRNYTAV 262
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ + + L I+ LP GPT HF +S + K + HGNPT H PEL+LNNF T LG
Sbjct: 263 VVLEEDLKRVSGLTIVHLPVGPTFHFSISNWIEGKKLPGHGNPTSHWPELILNNFRTPLG 322
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKAK 213
L ++LFP PE +GR+VVT HNQRD+IF R HRY+F K E DANG + K
Sbjct: 323 LLTAHLFRTLFPPQPELQGRQVVTLHNQRDYIFVRRHRYVFRDKRETEKCVVDANGVEMK 382
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFTLKL + G G ++EW K M+ R +F L
Sbjct: 383 GVEGIRAG-------LQELGPRFTLKLRRIDKGIQRKSGQDWEW--KGRMEKVRTKFQL 432
>gi|383851297|ref|XP_003701170.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Megachile rotundata]
Length = 311
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 128/231 (55%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFAKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD+L+I LP GPTA+F +S +V+R D+ + G + P L+ +NF T+LG RV +
Sbjct: 154 RGIPDSLIICHLPYGPTAYFTMSDVVMRHDVPDIGTMSEQYPHLIFHNFKTKLGTRVMSI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R++TF N D+I FRHH Y K+ G D
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHHTY----KKVHGKD---------------- 252
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT D + + EW +P M+T+ +R FL
Sbjct: 253 ----IELTEVGPRFQLKLYEIKLGTLDAESAADVEWALRPYMNTTHKRRFL 299
>gi|169612059|ref|XP_001799447.1| hypothetical protein SNOG_09145 [Phaeosphaeria nodorum SN15]
gi|111062217|gb|EAT83337.1| hypothetical protein SNOG_09145 [Phaeosphaeria nodorum SN15]
Length = 425
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 130/247 (52%), Gaps = 16/247 (6%)
Query: 32 EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKII 85
+F + PKIL+TT ++ A I L S+ PNS Y +R Y +++I
Sbjct: 185 KFPQLFDPQPEPKILVTTSINSTLHAEADI--LTSLFPNSTYIRRSANFHAHKYSVREIA 242
Query: 86 EYAKKKDFTSIIVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI 143
++A +++T+++V+ E PD L II LP+GP HF ++ + K + H N TGH
Sbjct: 243 KFAANREYTALVVLMQAEHEKKPDGLDIIHLPNGPHFHFSVTNWIEGKKLPRHANDTGHY 302
Query: 144 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK 203
PEL+LNNF T LG L + LFP +PE GR+V+T HNQRD+IF R HRY+F K
Sbjct: 303 PELILNNFKTPLGILTAHLFKGLFPAAPELEGRQVLTLHNQRDYIFVRRHRYVFRDKRET 362
Query: 204 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 263
G K K + V +QE GPR TLKL + G E+EW K M
Sbjct: 363 EKPITGNDGKPIK----GVEDVKVGMQEIGPRMTLKLRRIDREVQFKSGQEWEW--KGRM 416
Query: 264 DTSRRRF 270
+ R RF
Sbjct: 417 EKKRTRF 423
>gi|189241108|ref|XP_972242.2| PREDICTED: similar to U3 small nucleolar ribonucleoprotein
component [Tribolium castaneum]
gi|270013895|gb|EFA10343.1| hypothetical protein TcasGA2_TC012561 [Tribolium castaneum]
Length = 312
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 129/231 (55%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F+ EL + PN+ RG Y++K++I + D T IVVH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNAQRMNRGNYEMKQLIHACRANDVTDFIVVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD+L++ LP GPTA+F +S +V+R DI + G + P L+ +NF T+LG RV +
Sbjct: 154 RGVPDSLVVCHLPYGPTAYFTMSDVVMRHDIPDLGTMSEQYPHLIFHNFKTKLGERVTNI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R++TF N D+I FRHH Y KT
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHHNY-----------------------KTVD 249
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
+++ L E GPRF L+L ++ GT D + EW +P M+T+ +R FL
Sbjct: 250 KQI--ELSEVGPRFQLRLYEIKLGTLDNADAADTEWALRPYMNTTVKRRFL 298
>gi|398393230|ref|XP_003850074.1| hypothetical protein MYCGRDRAFT_110502 [Zymoseptoria tritici
IPO323]
gi|339469952|gb|EGP85050.1| hypothetical protein MYCGRDRAFT_110502 [Zymoseptoria tritici
IPO323]
Length = 420
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 129/238 (54%), Gaps = 16/238 (6%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKD--FT 94
PK+LITT ++ A + L + PNS+Y +R Y +++I YA +D +T
Sbjct: 191 PKVLITTSINSTLHNEAEL--LTQLFPNSNYIRRTAHFHSYKYSVREIAAYASSEDAGYT 248
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++++ + ++P + I+ LP GP HF +S + I HGNPT H PEL+LN F T
Sbjct: 249 HLVILNEDLKKPKGIDIVHLPTGPMFHFSISNWIPGARIPGHGNPTNHYPELILNGFRTP 308
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKD 214
LG L +SLFP PE +GR+VVT HNQRD+IF R HRY+F K+ G K
Sbjct: 309 LGVVTAHLFKSLFPPHPEIQGRQVVTLHNQRDYIFMRRHRYVFRDKKGTEKSIQGTDGKL 368
Query: 215 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K + + LQE GPRFT+KL + G G E+EW K + R RF L
Sbjct: 369 MK----GVEDIRAGLQELGPRFTMKLRRVDKGIQRASGQEWEW--KAHDEKVRTRFSL 420
>gi|145253827|ref|XP_001398426.1| RNA processing factor 1 [Aspergillus niger CBS 513.88]
gi|134083999|emb|CAK49154.1| unnamed protein product [Aspergillus niger]
Length = 443
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 134/238 (56%), Gaps = 16/238 (6%)
Query: 42 APKILITTCRFNSNRGPAFISELLS-VIPNSHYYKRG------TYDLKKIIEYAKKKDFT 94
+PKILITT N + +ELL+ + PNS Y +R + +++I ++A ++FT
Sbjct: 215 SPKILITTS---LNSSLHYEAELLTDLFPNSVYVRRTRHRFAHQFSIREISKFATNRNFT 271
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++++ ++++P L I+ LP GP HF ++ V K I HG T H PEL+LNNF T
Sbjct: 272 AVVILREDQKKPAGLDIVHLPTGPMFHFSMTNWVEGKRIPGHGRATEHWPELILNNFRTP 331
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKD 214
LG L ++LFP P+ GR+VVT N RD++FFR HRY+F K G K+
Sbjct: 332 LGLLTAHLFRTLFPPQPDIEGRQVVTVLNSRDYLFFRRHRYVFREKRETEKAVVGSDGKE 391
Query: 215 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K + + +QE GPRFTLKL + G G E+EW K +M+ +R +F L
Sbjct: 392 MK----GAEGIRAGMQELGPRFTLKLRRVDKGIQRASGQEWEW--KGQMEKTRTKFQL 443
>gi|350421740|ref|XP_003492942.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Bombus impatiens]
Length = 311
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 129/231 (55%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P++L+I LP GPTA+F +S +++R DI + G + P L+ +NF T+LG RV +
Sbjct: 154 RGVPNSLIICHLPYGPTAYFTMSDVIMRHDIPDIGTMSEQYPHLIFHNFKTKLGERVMSI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R++TF N D+I FRHH Y +GK +
Sbjct: 214 LKYLFP-VPKEDSKRIITFANHDDYISFRHHTY---------KKIHGKAIE--------- 254
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTK-GGEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT D + + EW +P M+TS +R FL
Sbjct: 255 ------LVEVGPRFQLKLYQIKLGTLDAEAAADTEWALRPYMNTSHKRRFL 299
>gi|325181825|emb|CCA16280.1| U3 small nucleolar ribonucleoprotein protein IMP4 p [Albugo
laibachii Nc14]
Length = 784
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 126/227 (55%), Gaps = 26/227 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI ITT R S+R F EL +IPN+ RGT+ + ++E A+ +F+ +I+V
Sbjct: 581 PKIAITTSRDPSSRLKQFAQELRVIIPNAIRLNRGTHTIINLVESARSNEFSDLILVTET 640
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD L++ LP GPTA+F LS VLR DI++ + P L+LN F T LG RV +
Sbjct: 641 RGEPDGLVVCHLPFGPTAYFSLSNTVLRHDIEDRATISEAYPHLILNQFETVLGRRVANI 700
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N DFI FRHH + K+ + D
Sbjct: 701 LKHLFP-VPKPDSKRVITFANDHDFISFRHHTF---RKQGRQVD---------------- 740
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L ECGPRF L+L ++ GT D K E EWV +P M++++ R
Sbjct: 741 ------LSECGPRFELQLYQIKLGTCDQKEAENEWVLRPYMNSAKNR 781
>gi|298710512|emb|CBJ25576.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 286
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 127/230 (55%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+ +TT R S+R F EL V+PN+ RG + + +++ + +FT +IVV
Sbjct: 82 PKVCVTTSRDPSSRLKQFAKELKLVVPNAQRINRGNHKVGELVGACRSSEFTDMIVVQET 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD L++ LP GPTA F LS VLR DI + G + P L+ + F+T LG RV +
Sbjct: 142 RGEPDGLIVCHLPLGPTAFFTLSNCVLRHDIADRGTVSEVYPHLIFDKFSTPLGQRVADV 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF N+ D ++FRHH Y EK
Sbjct: 202 LKYLFP-VPKADSRRVMTFSNEEDVLYFRHHMY----------------------EKRGG 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++++ L E GPRF ++L L+ GT D E EWV +P M++S++R FL
Sbjct: 239 KEMV--LHEVGPRFEMQLYQLRLGTLDQVEAENEWVMRPYMNSSKKRRFL 286
>gi|268637941|ref|XP_002649153.1| U3 small nucleolar ribonucleoprotein protein [Dictyostelium
discoideum AX4]
gi|256012946|gb|EEU04101.1| U3 small nucleolar ribonucleoprotein protein [Dictyostelium
discoideum AX4]
Length = 286
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+L+TT R S+R F EL + PNS RG + +K++++ + D T +++ H +
Sbjct: 82 PKVLVTTSREPSSRLIQFTKELRMLFPNSQKMNRGAHVVKELVDACRANDVTDLVIAHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EP L+I LP GPTA+F++ V+ DI P+ P L+ +NF T LG R +
Sbjct: 142 RGEPVGLVISHLPYGPTAYFEIKNCVMIHDIDEATPPSLAFPHLIFHNFTTPLGERTENI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRVVTF N DFI FRHH Y EK
Sbjct: 202 LKYLFP-VPKDDSRRVVTFSNDNDFISFRHHIY----------------------EKDGY 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ VI L+E GPRF LKL +Q GT D + EWV+KP M++++ R FL
Sbjct: 239 KNVI--LKEIGPRFELKLYKIQLGTLDQDEADLEWVYKPYMNSTKNRLFL 286
>gi|325181241|emb|CCA15655.1| U3 small nucleolar ribonucleoprotein protein IMP4 p [Albugo
laibachii Nc14]
Length = 287
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 127/230 (55%), Gaps = 26/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI ITT R S+R F EL +IPN+ RGT+ + ++E A+ +F+ +I+V
Sbjct: 84 PKIAITTSRDPSSRLKQFAQELRVIIPNAIRLNRGTHTIINLVESARSNEFSDLILVTET 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD L++ LP GPTA+F LS VLR DI++ + P L+LN F T LG RV +
Sbjct: 144 RGEPDGLVVCHLPFGPTAYFSLSNTVLRHDIEDRATISEAYPHLILNQFETVLGRRVANI 203
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N DFI FRHH + K+ + D
Sbjct: 204 LKHLFP-VPKPDSKRVITFANDHDFISFRHHTF---RKQGRQVD---------------- 243
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L ECGPRF L+L ++ GT D K E EWV +P M++++ R L
Sbjct: 244 ------LSECGPRFELQLYQIKLGTCDQKEAENEWVLRPYMNSAKNRNHL 287
>gi|427785115|gb|JAA58009.1| Putative u3 small nucleolar ribonucleoprotein snornp component
[Rhipicephalus pulchellus]
Length = 300
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 127/231 (54%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ + PN+ RG Y++K++IE + + T IVVH
Sbjct: 83 PKIVVTTSRDPSSKLKQFAKEIRLIFPNAQRMNRGGYEMKQLIEACRANEVTDFIVVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F + V+R DI N G + P L+ +NF TRLG RV +
Sbjct: 143 RGNPDGLVVCHLPYGPTAYFTILNTVMRHDIPNIGTMSEAYPHLIFHNFKTRLGKRVVNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RVVTF NQ D+I FRHH + K+ KD +
Sbjct: 203 LKYLFP-VPKEDSHRVVTFANQDDYISFRHHTF-------------KKEGKDYQ------ 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGG-EFEWVHKPEMDTSRRRFFL 272
LQE GPRF LKL ++ GT D + EW +P M+T+++R FL
Sbjct: 243 ------LQEVGPRFELKLYEIKLGTLDAAAALDVEWSLRPYMNTAKKRRFL 287
>gi|348683814|gb|EGZ23629.1| hypothetical protein PHYSODRAFT_481255 [Phytophthora sojae]
Length = 287
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 123/230 (53%), Gaps = 26/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI ITT R S R F E+ + PN+ RG + + ++E A+ DFT +I+V
Sbjct: 84 PKIAITTSRDPSARLKQFAQEIRLIFPNAIRLNRGAHTVGDLVESARSNDFTDLILVTET 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD L++ LP GPTA+F LS VLR DI++ + P L++N F T LG RV +
Sbjct: 144 RGEPDGLVVCHLPYGPTAYFSLSNTVLRHDIEDRATISEAYPHLIINQFETMLGKRVANI 203
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+T N DF+ FRHH + +E
Sbjct: 204 LKHLFP-VPKPDSKRVITLSNDNDFVSFRHHVFKVTGRE--------------------- 241
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQECGPRF L+L ++ GT D K E EWV +P M+++++R L
Sbjct: 242 ----VELQECGPRFELQLYQVKLGTLDQKEAENEWVLRPYMNSAKKRRVL 287
>gi|321472011|gb|EFX82982.1| hypothetical protein DAPPUDRAFT_100904 [Daphnia pulex]
Length = 309
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 128/231 (55%), Gaps = 25/231 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT S+R F+ EL V PNS RG Y++K++++ + T IVVH +
Sbjct: 95 PKIMITTSHDPSSRLKMFVKELKLVFPNSQRLNRGNYEMKQLLDACRANSVTDFIVVHEH 154
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +P+A++I LP GPTA+F +S +V+R DI + G + P LV +N T LG RV +
Sbjct: 155 RGQPNAIIISHLPYGPTAYFNVSDVVMRHDIPDIGPMSEQYPHLVFHNMKTPLGQRVMNI 214
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N DFI +RHH Y KG G
Sbjct: 215 LKYLFP-VPKEDSKRVITFANHDDFISYRHHTY------KKGEAGKG------------- 254
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
L+E GPRF L+L L+ GT D + EW ++P M+T+++R FL
Sbjct: 255 ----IELKEVGPRFQLRLYDLKLGTIDQADAADTEWAYRPYMNTTKKRRFL 301
>gi|119498571|ref|XP_001266043.1| RNA processing factor 1 [Neosartorya fischeri NRRL 181]
gi|119414207|gb|EAW24146.1| RNA processing factor 1 [Neosartorya fischeri NRRL 181]
Length = 444
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 127/236 (53%), Gaps = 14/236 (5%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A L ++ PNS Y +R + +++I +A +++T++
Sbjct: 217 PKILITTSLNSTLHNEA--KSLTNLFPNSVYIRRTAHHHSHKFSIREIASFASNRNYTTV 274
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ +++ P L I+ LP GPT HF +S+ + K + HGN T H PEL+LNNF T LG
Sbjct: 275 VVLQEDQKRPSGLTIVHLPQGPTFHFTISRWIEGKKLPGHGNATEHWPELILNNFRTPLG 334
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
L +S+FP P+ GR+VVT HNQRD++F R HRY+F K G K+ K
Sbjct: 335 LLTAHLFRSMFPPQPDLEGRQVVTIHNQRDYLFLRRHRYVFREKRETEKSVVGTDGKEIK 394
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GP KL + G G E+EW K M+ R +F L
Sbjct: 395 ----GVEGIRAGLQELGPAINFKLRRVDKGIQRASGQEWEW--KGGMEKQRTKFQL 444
>gi|345565870|gb|EGX48818.1| hypothetical protein AOL_s00079g457 [Arthrobotrys oligospora ATCC
24927]
Length = 446
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 132/238 (55%), Gaps = 14/238 (5%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT-YDLKKIIEYAKKKDFTSIIVVHT 101
PK+L+T+ R R L + PN+ Y RGT + + +I +A + +T ++V
Sbjct: 215 PKLLLTSTR--RARQHQLYQTLSLIFPNTTYVPRGTKFTIPQIASFATNRQYTHLLVALE 272
Query: 102 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGR 161
+ + L+II LP GPT HF L+ K I+ G T H+PEL+LNNF T +G
Sbjct: 273 DSKTLHGLIIILLPAGPTFHFSLTNFADGKAIQGRGVNTNHVPELILNNFTTTIGRLTAS 332
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF-ETKE-----SKGSDANGKKAKDA 215
L QSL+P P+F GR+VVT HNQRD+IFFR HRYIF E E S+G G A
Sbjct: 333 LFQSLYPPQPQFMGRQVVTLHNQRDYIFFRFHRYIFREIAEKNKGISRGDRTTGAAAVGV 392
Query: 216 KSEKTSQQKVI-TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++ + I LQE GP+FTLKL ++ G + G E+EW K +M+ R+ F L
Sbjct: 393 GGQRAGEDLGIKVGLQELGPQFTLKLRRVERGICE--GIEWEW--KGKMEKDRKMFHL 446
>gi|301114965|ref|XP_002999252.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Phytophthora
infestans T30-4]
gi|262111346|gb|EEY69398.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Phytophthora
infestans T30-4]
Length = 287
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 126/230 (54%), Gaps = 26/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI ITT R S+R F E+ + PN+ RG + + ++E A+ DFT +++V
Sbjct: 84 PKIAITTSRDPSSRLKQFAQEIRLIFPNAIRLNRGAHTVGDLVESARSNDFTDLLLVTET 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD L++ LP GPTA+F LS VLR DI++ + P L++N F T LG RV +
Sbjct: 144 RGEPDGLVVCHLPYGPTAYFSLSNTVLRHDIEDRATISEAYPHLIINQFETPLGKRVANI 203
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+T N DF+ FRHH G G++ +
Sbjct: 204 LKHLFP-VPKPDAKRVITLSNDNDFVSFRHH----------GFKVTGREVE--------- 243
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQECGPRF L+L ++ GT D K E EWV +P M+++++R L
Sbjct: 244 ------LQECGPRFELQLYQVKLGTLDQKEAENEWVLRPYMNSAKKRRVL 287
>gi|358373297|dbj|GAA89896.1| RNA processing factor 1 [Aspergillus kawachii IFO 4308]
Length = 450
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 138/241 (57%), Gaps = 22/241 (9%)
Query: 42 APKILITTCRFNSNRGPAFISELLS-VIPNSHYYKRG------TYDLKKIIEYAKKKDFT 94
+PKILITT +S A ELL+ + PNS Y +R + +++I ++A ++FT
Sbjct: 222 SPKILITTSLNSSLHHEA---ELLTDLFPNSVYVRRTRHRFAHQFSIREISKFATNRNFT 278
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++++ ++++P L I+ LP GP HF ++ V K I HG T H PEL+LNNF T
Sbjct: 279 AVVILREDQKKPTGLDIVHLPTGPMFHFSMTNWVEGKRIPGHGRATDHWPELILNNFRTP 338
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKK 211
LG L ++LFP P+ GR+VVT N RD++FFR HRY+F K E A+GK+
Sbjct: 339 LGLLTAHLFRTLFPPQPDIEGRQVVTVLNSRDYLFFRRHRYVFREKRETEKAVVGADGKE 398
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFF 271
K A+ + +QE GPRFTLKL + G G E+EW K +M+ +R +F
Sbjct: 399 MKGAEGIRAG-------MQELGPRFTLKLRRVDKGIQRASGQEWEW--KGQMEKTRTKFQ 449
Query: 272 L 272
L
Sbjct: 450 L 450
>gi|403357744|gb|EJY78503.1| hypothetical protein OXYTRI_24339 [Oxytricha trifallax]
Length = 288
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+L+TT R S R F E+ +IPNS RG Y LK +++ + + T +I++H
Sbjct: 83 PKVLVTTSRSASQRLMQFQKEMKLIIPNSVRINRGNYVLKDLVKICQVNNITDLIILHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH-IPELVLNNFATRLGHRVGR 161
R EPD +++ +P GPTA+F +S +VLR D+K+ +P P L+L NF T+LG R+
Sbjct: 143 RGEPDGMIVSHMPYGPTAYFGMSNVVLRHDLKDKVDPVSEAYPHLILQNFNTKLGDRISD 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ +FP P+ +RV+TF N+ DFI FRHH Y K +D K+
Sbjct: 203 ILKYIFP-LPKVDSKRVMTFVNEDDFISFRHHVY---------------KKEDHKN---- 242
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L+E GPRF +K + GT D + + EWV +P M+T+++R +L
Sbjct: 243 -----VALKELGPRFEMKPYQIVLGTVDLQDAQKEWVLRPYMNTAKKRAYL 288
>gi|302771191|ref|XP_002969014.1| hypothetical protein SELMODRAFT_145922 [Selaginella moellendorffii]
gi|300163519|gb|EFJ30130.1| hypothetical protein SELMODRAFT_145922 [Selaginella moellendorffii]
Length = 300
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 144/273 (52%), Gaps = 41/273 (15%)
Query: 7 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 66
+NT EP V DD+ +AG PKIL+TT R S+R F+ EL
Sbjct: 62 DNTAEPTTHV---DDEYAYAGE------------VDPKILLTTSRDPSSRLTQFVKELKI 106
Query: 67 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 126
V PN+ RG + +I+E + DFT II+VH +R EPD L++ LP GPTA+F L
Sbjct: 107 VFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMN 166
Query: 127 LVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
+V R DIK+ G + P L+LNNF T+LG R +++ LFP P+ +R++TF N
Sbjct: 167 VVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFP-VPKPDSKRLITFAN 225
Query: 184 QRDFIFFRH----HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
Q+D+I FRH H + +G G K+ L+E GPRF L+
Sbjct: 226 QQDYISFRHIPSPHFSCLKPARFQG----GVKS--------------IELKEVGPRFELR 267
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L ++ GT D + EWV +P M++SR+R L
Sbjct: 268 LYQIKLGTVDQTEAQNEWVIRPYMNSSRKRAAL 300
>gi|225449863|ref|XP_002265279.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis
vinifera]
gi|147790699|emb|CAN61017.1| hypothetical protein VITISV_041221 [Vitis vinifera]
gi|296081284|emb|CBI17728.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 138/245 (56%), Gaps = 29/245 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+++ ++ PKIL+TT R S F+ EL V PN+ RG + +IIE +
Sbjct: 73 DEYANATEKD--PKILLTTSRNPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRA 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELV 147
DFT +++VH +R PD ++I LP GPTA+F L +V R DIK+ G + P L+
Sbjct: 131 HDFTDVVLVHEHRGVPDGIIISHLPFGPTAYFGLLNVVTRHDIKDKKAIGKMSEAYPHLI 190
Query: 148 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDA 207
LNNF+T+LG R +++ LFP P+ +R++TF NQ D++ FRHH Y E +G
Sbjct: 191 LNNFSTKLGERTANILKHLFP-VPKPDTKRIITFANQSDYVSFRHHVY-----EKRG--- 241
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
G K+ L+E GPRF L+L ++ GT D + EWV +P M+T++
Sbjct: 242 -GPKS--------------IELKEVGPRFELRLYQIKLGTMDQSEAQIEWVIRPYMNTTK 286
Query: 268 RRFFL 272
+R FL
Sbjct: 287 KRKFL 291
>gi|225712572|gb|ACO12132.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Lepeophtheirus
salmonis]
Length = 310
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 129/231 (55%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F+ E+ ++PNS RG Y+ K++++ + + T +++VH +
Sbjct: 95 PKVMLTTSRDPSSRLKKFVKEIKLLVPNSQRINRGNYEFKQLMDACRANEVTDVVIVHEH 154
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F LS +V+R DI GN + P LV +NF ++LG R +
Sbjct: 155 RGNPDGLIVCHLPFGPTAYFTLSDIVMRHDIPELGNMSEQYPHLVFHNFKSKLGERCTNI 214
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I FRHH Y KG N
Sbjct: 215 LKYLFP-VPKEDSKRVMTFANHDDYISFRHHTY------KKGDGKN-------------- 253
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF L+L ++ GT ++ EWV +P M+T+++R FL
Sbjct: 254 ----IELSEVGPRFQLRLYEIKLGTLESISAANSEWVLRPYMNTAKKRRFL 300
>gi|159126227|gb|EDP51343.1| RNA processing factor 1 [Aspergillus fumigatus A1163]
Length = 425
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 126/236 (53%), Gaps = 14/236 (5%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A L + PNS Y +R + +++I +A +++TS+
Sbjct: 198 PKILITTSLNSTLHNEA--RSLTDLFPNSVYIRRTAHRYSHKFSIREIAAFASNRNYTSV 255
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ +++ P L I+ LP GPT HF +S+ + K + HGN T H PEL+LNNF T LG
Sbjct: 256 VVLQEDQKRPSGLTIVHLPQGPTFHFTISRWIEGKKLPGHGNATEHRPELILNNFRTPLG 315
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
L +S+FP P+ GR+VVT HNQRD++F R HRY+F K G K+ K
Sbjct: 316 LLTAHLFRSMFPPQPDLEGRQVVTIHNQRDYLFLRRHRYVFREKRETEKSVVGTDGKEIK 375
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GP KL + G G E+EW K M+ R +F L
Sbjct: 376 ----GVEGIRAGLQELGPAINFKLRRVDKGIQRASGQEWEW--KGGMEKQRTKFQL 425
>gi|70998634|ref|XP_754039.1| RNA processing factor 1 [Aspergillus fumigatus Af293]
gi|66851675|gb|EAL92001.1| RNA processing factor 1 [Aspergillus fumigatus Af293]
Length = 425
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 126/236 (53%), Gaps = 14/236 (5%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A L + PNS Y +R + +++I +A +++TS+
Sbjct: 198 PKILITTSLNSTLHNEA--RSLTDLFPNSVYIRRTAHRYSHKFSIREIAAFASNRNYTSV 255
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+V+ +++ P L I+ LP GPT HF +S+ + K + HGN T H PEL+LNNF T LG
Sbjct: 256 VVLQEDQKRPSGLTIVHLPQGPTFHFTISRWIEGKKLPGHGNATEHRPELILNNFRTPLG 315
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
L +S+FP P+ GR+VVT HNQRD++F R HRY+F K G K+ K
Sbjct: 316 LLTAHLFRSMFPPQPDLEGRQVVTIHNQRDYLFLRRHRYVFREKRETEKSVVGTDGKEIK 375
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GP KL + G G E+EW K M+ R +F L
Sbjct: 376 ----GVEGIRAGLQELGPAINFKLRRVDKGIQRASGQEWEW--KGGMEKQRTKFQL 425
>gi|350634077|gb|EHA22441.1| hypothetical protein ASPNIDRAFT_45208 [Aspergillus niger ATCC 1015]
Length = 443
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 132/237 (55%), Gaps = 14/237 (5%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG------TYDLKKIIEYAKKKDFTS 95
+PKILITT +S A + L + PNS Y +R + +++I ++A ++FT+
Sbjct: 215 SPKILITTSLNSSLHHEAEL--LTDLFPNSVYVRRTRHRFAHQFSIREISKFATNRNFTA 272
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++++ ++++P L I+ LP GP HF ++ V K I HG T H PEL+LNNF T L
Sbjct: 273 VVILREDQKKPAGLDIVHLPTGPMFHFSMTNWVEGKRIPGHGRATEHWPELILNNFRTPL 332
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G L ++LFP P+ GR+VVT N RD++FFR HRY+F K G K+
Sbjct: 333 GLLTAHLFRTLFPPQPDIEGRQVVTVLNSRDYLFFRRHRYVFREKRETEKAVVGSDGKEM 392
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K + + +QE GPRFTLKL + G G E+EW K +M+ +R +F L
Sbjct: 393 K----GAEGIRAGMQELGPRFTLKLRRVDKGIQRASGQEWEW--KGQMEKTRTKFQL 443
>gi|452982063|gb|EME81822.1| hypothetical protein MYCFIDRAFT_32566 [Pseudocercospora fijiensis
CIRAD86]
Length = 420
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 129/238 (54%), Gaps = 16/238 (6%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKD--FT 94
PK+L+TT ++ A + L ++ PNS Y +R Y +++I +YA +D +T
Sbjct: 191 PKVLVTTSINSTLHTEAQL--LTTLFPNSKYIRRTAHAHAYKYSVREICKYASDEDRGYT 248
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++++ + + P + I+ LP+GP HF +S + HGNPT H PEL+LN F T
Sbjct: 249 HVVILNEDLKRPKGIDIVHLPEGPMFHFSISNWTPGSKLPGHGNPTNHYPELILNGFRTP 308
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKD 214
LG L +SLFPQ PE GR+VVT HNQRD+IF R HRY+F K+S G K
Sbjct: 309 LGLLAAHLFKSLFPQRPELVGRQVVTLHNQRDYIFLRRHRYVFRDKKSTEKSIQGADGKK 368
Query: 215 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ + LQE GPRFT+KL + G G E++W K + R RF L
Sbjct: 369 V----DGVEDIRVGLQELGPRFTMKLRRVDKGIQFASGQEWKW--KAGDEKVRTRFSL 420
>gi|453083784|gb|EMF11829.1| Brix-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 433
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 130/241 (53%), Gaps = 22/241 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKD--FT 94
PK+LITT ++ + L + PNS Y KR Y +++I YA D +T
Sbjct: 204 PKVLITTSINSTLHHEGQL--LTGLFPNSKYIKRTAHFHAYKYSIREICSYASDPDRGYT 261
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++++ +++ P + I+ LP GP HF +SK + + HGNPT H PEL+LN F T
Sbjct: 262 HVVILNEDQKRPKGIDIVHLPHGPMFHFSISKWIPGNKLPGHGNPTNHYPELILNGFRTP 321
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKK 211
LG L +SLFP PE +GR+V+T HNQRD+IF R HRY+F K E A+GK
Sbjct: 322 LGLLTAHLFKSLFPPRPEIQGRQVLTLHNQRDYIFLRRHRYVFRDKRGTEKPIQGADGKP 381
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFF 271
K A + + LQE GPRFT+KL + G G E++W K + R RF
Sbjct: 382 MKGA-------EDIRVGLQELGPRFTMKLRRVDKGIQKASGQEWQW--KAGDEKVRTRFS 432
Query: 272 L 272
L
Sbjct: 433 L 433
>gi|310789481|gb|EFQ25014.1| brix domain-containing protein [Glomerella graminicola M1.001]
Length = 423
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 134/240 (55%), Gaps = 17/240 (7%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A + ++ PNS Y R Y L++I ++A +D+T++
Sbjct: 191 PKILITTSLNSTLHYEANV--FRTIFPNSTYVPRSAHRYGHKYSLREISKFASNRDYTAV 248
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+++ ++++ + I+ LP GPT F ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 249 VLLKEDQKKLTGMSIVHLPAGPTFTFSITNFMEGKKLPGHGNPTNHYPELLLNNFKTPLG 308
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
L Q LFP PE GR+V+T HNQRD++FFR HRY+F +E + ++ N A A
Sbjct: 309 LLTAALFQRLFPPQPELEGRQVLTVHNQRDYLFFRRHRYVF--REKRETEKNITTADGA- 365
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 272
E + + LQE GPRFT KL + G G E E W K +M+ R+RF L
Sbjct: 366 -EMKGVEGIRVGLQEVGPRFTAKLRRVDKG-IGRAGSEGEDSQPWEWKAKMEKDRKRFNL 423
>gi|320168811|gb|EFW45710.1| U3 small nucleolar ribonucleoprotein IMP4 [Capsaspora owczarzaki
ATCC 30864]
Length = 293
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 137/265 (51%), Gaps = 42/265 (15%)
Query: 8 NTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSV 67
N E + + DD+ +AGN PKI++TT R S+R F EL +
Sbjct: 65 NVNEDAQGMEYQDDEYAYAGN------------VEPKIMLTTSRDPSSRLKMFAKELRGL 112
Query: 68 IPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 127
+PN+ RG Y LK+++ +K D T +I+VH +R EPD L+I +P GPTA+F LS +
Sbjct: 113 LPNTQKMNRGGYILKELVAACRKNDVTDLIIVHEHRGEPDGLVISHMPYGPTAYFALSNV 172
Query: 128 VLRKD---IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 184
V+R D + G P + P L+ NNF TRLG RV +++ LFP P+ RV+TF N
Sbjct: 173 VMRHDLPELTTAGMPEAY-PHLIFNNFNTRLGERVRNILKYLFP-VPKDDSSRVITFANT 230
Query: 185 RDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 244
D++ RHH + + G D +L E GPRF +K+ ++
Sbjct: 231 DDYVSLRHHTF-----KKSGRD--------------------IQLTEVGPRFEMKVYQIK 265
Query: 245 HGTFDTKGGEFEWVHKPEMDTSRRR 269
GT D + EWV KP M T+R+R
Sbjct: 266 LGTADETEADDEWVLKPYMHTARKR 290
>gi|328909165|gb|AEB61250.1| ribosome production factor 1-like protein, partial [Equus caballus]
Length = 272
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET+ P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+GPTAH
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
Query: 122 FKLSKLVLRKDIKNHG-NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 173
FK+S + LRK+IK G +PT HIPE++LNNF TRLGH R+ SLFP +P+
Sbjct: 221 FKMSSVRLRKEIKRRGKDPTEHIPEIILNNFTTRLGHS-RRMFASLFPHNPQL 272
>gi|168061575|ref|XP_001782763.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665736|gb|EDQ52410.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 137/245 (55%), Gaps = 29/245 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S+ + PKIL+TT R S+R F+ EL V PN+ RG + +I+E +
Sbjct: 73 DEYSNAGIEN--PKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISEIVESCRA 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELV 147
++++ +I+VH +R EPD L++ LP GPTA+F LS +V R DIK+ G + P L+
Sbjct: 131 QEYSDLIMVHEHRGEPDGLIVCHLPYGPTAYFGLSNVVTRHDIKDKGVLGTMSEQYPHLI 190
Query: 148 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDA 207
NNF T+LG R +++ LFP P+ +R++TF NQ D+I FRHH Y
Sbjct: 191 FNNFNTKLGQRTVNILKHLFP-VPKPDAKRIITFANQSDYISFRHHMY------------ 237
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
EK + K I ++E GPRF L+L ++ GT D + EWV +P M++ +
Sbjct: 238 ----------EKPAGVKSID-IKEVGPRFELRLYQVKLGTMDQTEAQNEWVIRPYMNSGK 286
Query: 268 RRFFL 272
+R L
Sbjct: 287 KRIAL 291
>gi|225719840|gb|ACO15766.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Caligus
clemensi]
Length = 310
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 38/260 (14%)
Query: 14 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
ET DD+ +AG PK+++TT R S+R F+ E+ +IPNS
Sbjct: 78 ETRSSQDDEYAWAG------------VADPKVMLTTSRDPSSRLKKFVKEIKLLIPNSQR 125
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG ++ K++++ + + T I++VH NR PD L++ LP GPTA+F LS +V+R D+
Sbjct: 126 INRGNHEFKQLVDACRANEVTDIVIVHENRGNPDGLIVCHLPFGPTAYFTLSDIVMRHDV 185
Query: 134 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 193
+ G+ + P L+ +NF + LG R +++ LFP P+ +RV+TF N DFI FRHH
Sbjct: 186 PDLGSMSEQYPHLIFHNFKSNLGERCMNILKYLFP-VPKEESKRVMTFANHDDFISFRHH 244
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KG 252
+ K+ +G D L E GPRF L+L ++ GT ++
Sbjct: 245 TF----KKGEGKD--------------------IELSEIGPRFQLRLYEIKLGTLESIAA 280
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
EWV +P M+T+++R FL
Sbjct: 281 ANSEWVLRPYMNTAKKRRFL 300
>gi|380491186|emb|CCF35498.1| brix domain-containing protein [Colletotrichum higginsianum]
Length = 421
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 135/240 (56%), Gaps = 17/240 (7%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKILITT ++ A I ++ PNS Y R Y L++I ++A +D+T++
Sbjct: 189 PKILITTSLNSTLHYEANI--FRTIFPNSTYVPRSAHRYGHKYSLREISKFASNRDYTAV 246
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLG 156
+++ ++++ + I+ LP GPT F ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 247 VLLKEDQKKLTGMSIVHLPTGPTFTFSITNFMEGKKLPGHGNPTNHYPELLLNNFKTPLG 306
Query: 157 HRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAK 216
L Q LFP PE GR+V+T HNQRD++FFR HRY+F +E + ++ N A+ A
Sbjct: 307 LLTAALFQRLFPPQPELEGRQVLTVHNQRDYLFFRRHRYVF--REKRETEKNITTAEGA- 363
Query: 217 SEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSRRRFFL 272
E + + LQE GPRFT KL + G G E + W K +M+ R+RF L
Sbjct: 364 -EMKGVEGIRVGLQEVGPRFTAKLRRVDKG-IGRAGSEGDDSQPWEWKAKMEKDRKRFNL 421
>gi|307190874|gb|EFN74711.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Camponotus
floridanus]
Length = 311
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 127/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL + PNS RG Y++K+++ + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFAKELRLIFPNSQRMNRGNYEMKQLVHACRANDVTDFIIVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F LS +++R DI + G + P L+ +NF T+LG RV +
Sbjct: 154 RGVPDTLVVCHLPYGPTAYFTLSGVIMRHDIPDIGTMSEQYPHLIFHNFKTKLGARVMNI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV++F N D+I FRHH Y KK E T
Sbjct: 214 LKYLFP-VPKEDSKRVISFANHDDYICFRHHTY--------------KKVHRKDIEMT-- 256
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
E GPRF +KL ++ GT DT+ + EW +P M+TS +R FL
Sbjct: 257 --------EVGPRFQMKLYEIKLGTLDTESTADTEWALRPYMNTSHKRRFL 299
>gi|297837007|ref|XP_002886385.1| hypothetical protein ARALYDRAFT_893060 [Arabidopsis lyrata subsp.
lyrata]
gi|297332226|gb|EFH62644.1| hypothetical protein ARALYDRAFT_893060 [Arabidopsis lyrata subsp.
lyrata]
Length = 294
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 134/255 (52%), Gaps = 37/255 (14%)
Query: 21 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 80
DDE +AD PKIL+TT R S F EL V PNS RG
Sbjct: 72 DDEYANATEAD-----------PKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGGQV 120
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHG 137
+ +IIE A+ DFT +I+VH +R PD L+I LP GPTA+F L +V R DI K G
Sbjct: 121 ISEIIETARSHDFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKAIG 180
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
P L+ NNF T++G RV +++ +FP +P+ RR+VTF NQ D+I FR+H Y
Sbjct: 181 KMPEQYPHLIFNNFTTQMGQRVANILKHIFP-APKLDARRIVTFANQSDYISFRNHVY-- 237
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
KG G K+ L+E GPRF L+L ++ GT + E EW
Sbjct: 238 ----DKGE--GGPKS--------------IELKEIGPRFELRLYQVKLGTVEQNEAEIEW 277
Query: 258 VHKPEMDTSRRRFFL 272
V +P M+T+++R F+
Sbjct: 278 VIRPYMNTAKKRQFI 292
>gi|330799514|ref|XP_003287789.1| hypothetical protein DICPUDRAFT_33009 [Dictyostelium purpureum]
gi|325082199|gb|EGC35689.1| hypothetical protein DICPUDRAFT_33009 [Dictyostelium purpureum]
Length = 287
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 125/230 (54%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+ ITT R S R F EL + PNS RG + +K++++ + D T +++ H +
Sbjct: 83 PKVFITTSREPSARLIQFSKELKMMFPNSQKMNRGAHVMKELVDACRANDVTDLVIAHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EP L++ LP GPTA+F++ V+ DI++ P+ P L+ NNF T LG R +
Sbjct: 143 RGEPVGLVVSHLPYGPTAYFEIKNCVMIHDIEDSSPPSLAFPHLIFNNFTTPLGERTENI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF N DFI FRHH Y EK
Sbjct: 203 LKYLFP-VPKEDSRRVITFSNDNDFISFRHHLY----------------------EKDGH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ +I L+E GPRF LKL +Q GT + + EWV++P M++S+ R F+
Sbjct: 240 KNII--LKEIGPRFELKLYKIQLGTVEQDEADLEWVYRPYMNSSKNRTFI 287
>gi|242794850|ref|XP_002482460.1| RNA processing factor 1 [Talaromyces stipitatus ATCC 10500]
gi|218719048|gb|EED18468.1| RNA processing factor 1 [Talaromyces stipitatus ATCC 10500]
Length = 410
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 137/245 (55%), Gaps = 20/245 (8%)
Query: 37 LKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKK 90
L + PKILITT ++ A + L S+ PNS Y +R + +K+I ++A
Sbjct: 177 LNETKTPKILITTAINSTLHHEAKL--LTSLFPNSVYIRRTAHHHAHKFSIKEISKFASN 234
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
++FT++IVV+ ++++ L I+ LP GP HF +S + K + HG + PEL+LNN
Sbjct: 235 RNFTALIVVNEDQKKVSGLDIVHLPQGPMFHFSVSNWIEGKKLPGHGTASEAYPELILNN 294
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDA 207
F + LG L +SL+P P+ GR+VVT HNQRD+ F R HRY+F K E D
Sbjct: 295 FRSPLGILTAHLFKSLWPPQPDLAGRQVVTIHNQRDYCFVRRHRYVFREKRETEKPVVDT 354
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
+GK+ K + KT LQE GPR TLKL + G + G E+EW K +M+ +R
Sbjct: 355 DGKEIKGVEGIKTG-------LQELGPRMTLKLRRVDKGIQRSSGQEWEW--KGKMEKTR 405
Query: 268 RRFFL 272
+F L
Sbjct: 406 TKFQL 410
>gi|289740219|gb|ADD18857.1| U3 small nucleolar ribonucleoprotein component snoRNP [Glossina
morsitans morsitans]
Length = 299
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 134/254 (52%), Gaps = 30/254 (11%)
Query: 21 DDELFAGNDAD-EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
D E G D D E+ Q PKI++TT S+R FI EL + PN+ RG Y
Sbjct: 60 DKEGVLGEDVDDEYRYAGYQD--PKIMLTTSHEPSSRLKMFIKELRLIFPNAKRMNRGKY 117
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 139
+LK++I + D + IVVH +R PD L+I LP GPTA F +S +++R DI N G
Sbjct: 118 ELKELIHACRANDVSDFIVVHEHRGVPDNLIICHLPYGPTAFFNISGVIMRHDIPNIGTI 177
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFET 199
+ P L+ +NF T+LG R ++++ LFP P+ +RV+TF N D+I FRHH Y +
Sbjct: 178 SEQKPHLIFHNFKTKLGERTLKILKHLFP-VPKEDSKRVITFANNDDYIAFRHHVYEYVN 236
Query: 200 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWV 258
KE +L E GPRF LKL ++ GT D + EW+
Sbjct: 237 KE-------------------------LQLVEVGPRFQLKLYQIKLGTLDEIQAANTEWI 271
Query: 259 HKPEMDTSRRRFFL 272
+P M+TS ++ FL
Sbjct: 272 LRPYMNTSSKKRFL 285
>gi|396494583|ref|XP_003844339.1| similar to RNA processing factor 1 [Leptosphaeria maculans JN3]
gi|312220919|emb|CBY00860.1| similar to RNA processing factor 1 [Leptosphaeria maculans JN3]
Length = 445
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 16/249 (6%)
Query: 32 EFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKII 85
+F + PKILITT ++ A I L S+ PNS Y +R Y +++I
Sbjct: 205 KFPQLFNTQPEPKILITTSINSTLHKEADI--LTSLFPNSTYIRRTANFHAHKYSVREIA 262
Query: 86 EYAKKKDFTSIIVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI 143
++A +D+T+++V+ + E D L +I LP+GP HF ++ + K + H TGH
Sbjct: 263 QFASARDYTALVVLMQAQHEKKADGLDVIHLPNGPHFHFSVTNWIEGKKLPRHATDTGHY 322
Query: 144 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK 203
PEL+LNNF T LG +L + LFP PE +GR+V+T HNQRD+IF R HRY+F K
Sbjct: 323 PELILNNFKTPLGVLTAQLFKGLFPADPELQGRQVLTLHNQRDYIFVRRHRYVFRDKRES 382
Query: 204 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 263
G K + + +QE GPR TLKL + G G E+EW K M
Sbjct: 383 EKSILGNDGKPM----PGVEDIKVGMQEIGPRMTLKLRRVDRGIQFKSGQEWEW--KGRM 436
Query: 264 DTSRRRFFL 272
+ R RF +
Sbjct: 437 EKQRTRFNM 445
>gi|452821009|gb|EME28044.1| hypothetical protein Gasu_43850 [Galdieria sulphuraria]
Length = 291
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 136/270 (50%), Gaps = 26/270 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P T+E+ R +P+D + DEFS + PK+++ + FIS
Sbjct: 48 PLTLEDKR-VQIVGFQPEDRVVIDYTLFDEFSDVFSGAVIPKVVVVPGLKATRMTYNFIS 106
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
ELL +IPNS +Y+R L + A +K FT +I NR++ L + LP GP A++
Sbjct: 107 ELLQIIPNSVFYERKKSSLNQASVKAAEKGFTDVIFTEENRKQITGLFHVHLPHGPCAYY 166
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
+ V K + HG T PE++L++F T+LG R+ R++ +LF PE+ GR+VVT H
Sbjct: 167 SIRSYVPCKKVVGHGRSTASKPEVILSHFTTQLGIRIARMLGALFALEPEYSGRQVVTLH 226
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
NQRDFIFFR HRY F+ + K S LQE GPRFTL+L
Sbjct: 227 NQRDFIFFRFHRYQFDDRGVKVS-----------------------LQEQGPRFTLQLQQ 263
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L G E E+ K + S+ FFL
Sbjct: 264 LTKGLPGNDDAEIEFRKKKK--ASKYEFFL 291
>gi|365760351|gb|EHN02078.1| Rpf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 241
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 119/194 (61%), Gaps = 17/194 (8%)
Query: 4 RTIENTREPDETVCRP---DDDEL---FAGNDADEFSSILKQGCAPKILITTCRFNSNRG 57
+TIENTR DET+ + D+D+L F GN + PKI +TT
Sbjct: 58 QTIENTRVYDETINKEVEGDEDDLMKYFNGNSNE----------PPKIFLTTNVNAKKSA 107
Query: 58 PAFISELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F + ++ V+PN + KR Y LK+I + K++FT I++++ ++++ L I LP+
Sbjct: 108 YEFANIMIEVLPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPE 167
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
GPT +FKLS V K I HG PT HIPEL+LNNF TRLG VGRL QS+ PQ+P+ GR
Sbjct: 168 GPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGR 227
Query: 177 RVVTFHNQRDFIFF 190
+V+T HNQRD+IFF
Sbjct: 228 QVITLHNQRDYIFF 241
>gi|429860675|gb|ELA35401.1| RNA processing factor 1 [Colletotrichum gloeosporioides Nara gc5]
Length = 424
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 137/240 (57%), Gaps = 15/240 (6%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
PK+L+TT ++ A I SV PN+ Y R Y L++I ++A +D+T+
Sbjct: 191 VPKVLLTTSLNSTLHHEANI--FRSVFPNATYVPRSAHRFGHKYSLREISKFAANRDYTA 248
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
++++ ++++ + I+ LP GPT F ++ + K + HGNPT H PEL+LNNF T L
Sbjct: 249 VVMLKEDQKKLTGMSIVHLPAGPTFTFSITNFMEGKKLPGHGNPTNHYPELLLNNFKTPL 308
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
G L Q LFP PEF GR+V+T HNQRD++F+R HRY+F +E + ++ N A+
Sbjct: 309 GMLTAALFQRLFPPQPEFEGRQVLTIHNQRDYLFWRRHRYVF--REKRETEKNIVTAEG- 365
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGT--FDTKGGEFE-WVHKPEMDTSRRRFFL 272
SE + + LQE GPRFT KL + G ++G + + W K M+ R+RF L
Sbjct: 366 -SEMKGVEGIRVGLQEVGPRFTAKLRRVDKGIGRARSEGDDAQPWEWKARMEKDRKRFNL 424
>gi|115438426|ref|XP_001218063.1| ribosome production factor 1 [Aspergillus terreus NIH2624]
gi|114188878|gb|EAU30578.1| ribosome production factor 1 [Aspergillus terreus NIH2624]
Length = 431
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 133/240 (55%), Gaps = 20/240 (8%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
+PKILITT ++ A L PNS Y +R + +++I ++A +++T+
Sbjct: 203 SPKILITTGLNSTLHHEA--EALTDFFPNSIYVRRTAHRFSHKFSVREISKFAANREYTA 260
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
+++++ +++ + I+ LP GP HF +S V K I HG T H PEL+LNNF T L
Sbjct: 261 VVILNEDQKRVSGMDIVHLPSGPMFHFSISNWVDGKRIPGHGRSTAHWPELILNNFRTPL 320
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANGKKA 212
G RL Q+LFP P+ GR+VVT HNQRD++F R HRY+F K E A+GK+
Sbjct: 321 GLLTARLFQTLFPPQPDLEGRQVVTVHNQRDYLFVRRHRYVFREKRETEKPVVGADGKEM 380
Query: 213 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K A+ + S QE GPRFTLKL + G G E++W K ++ R +F L
Sbjct: 381 KGAEGIRVS-------TQELGPRFTLKLRRVDKGIQHASGQEWQW--KAGLEKQRTKFQL 431
>gi|451854175|gb|EMD67468.1| hypothetical protein COCSADRAFT_179126 [Cochliobolus sativus
ND90Pr]
Length = 433
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 127/236 (53%), Gaps = 16/236 (6%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT +S A + L S+ PNS Y +R Y +++I +A + +T++
Sbjct: 204 PKILVTTSINSSLHKEADV--LTSIFPNSTYIRRTKHAHAHKYSVREIASFAAARGYTAL 261
Query: 97 IVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++ + E PD L I+ LP+GP HF +S V K + H N TGH PEL+LN+F T
Sbjct: 262 VILMQAQHEKKPDGLDIVNLPNGPHFHFSVSNWVDGKKLPRHANDTGHYPELILNHFKTP 321
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKD 214
LG +L ++LFP PE GR+V+T HNQRD+IF R HRY+F K G K
Sbjct: 322 LGVLTAQLFKNLFPPFPELEGRQVLTLHNQRDYIFVRRHRYVFRDKRETEKPVLGTDGKP 381
Query: 215 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
+ V +QE GPR TLKL + G G E++W K MD R RF
Sbjct: 382 I----PGAEDVKVGMQEIGPRMTLKLRRIDRGIQFKSGQEWQW--KGRMDKQRTRF 431
>gi|320593554|gb|EFX05963.1| RNA processing factor 1 [Grosmannia clavigera kw1407]
Length = 400
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 133/253 (52%), Gaps = 23/253 (9%)
Query: 19 PDDDELFAGNDA--DEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYY 74
P +E A DA +++ +LK+ P+ILITT R + + L+ + PNS Y
Sbjct: 144 PTAEEKAARQDAMAAKYAELLKEPAPAEPRILITTSRHATIH--KYAHTLVDLFPNSTYI 201
Query: 75 KRG-------TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 127
R Y +++I YA + +T++++V+ + ++ L I LP GP HF +
Sbjct: 202 PRSGHRFVHHEYSIREIAGYATNRGYTALMIVNEDLKKASGLDIALLPHGPMLHFSIQTW 261
Query: 128 VLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 187
V K + NHG TGH PE+++NNF T LG VG ++ LFP +P+ GR+VVT HNQRD+
Sbjct: 262 VDAKFLPNHGRSTGHSPEMIMNNFDTSLGKLVGGVLGRLFPPNPDLVGRQVVTLHNQRDY 321
Query: 188 IFFRHHRYIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 244
+F R HRY K E +D NGK + K + LQE GPR TLKL +
Sbjct: 322 VFVRRHRYAVRDKRATERSVADKNGKTMAGVEDVKVA-------LQEIGPRMTLKLRRVD 374
Query: 245 HGTFDTKGGEFEW 257
G G FEW
Sbjct: 375 KGLQRMSGQAFEW 387
>gi|452000085|gb|EMD92547.1| hypothetical protein COCHEDRAFT_1194011 [Cochliobolus
heterostrophus C5]
Length = 435
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 128/238 (53%), Gaps = 16/238 (6%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT +S A + L S+ PNS Y +R Y +++I +A + +T++
Sbjct: 206 PKILVTTSINSSLHKEADV--LTSIFPNSTYIRRTKHAHAHKYSVREIAGFAAARGYTAL 263
Query: 97 IVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++ + E PD L I+ LP+GP HF +S V K + H N TGH PEL+LN+F T
Sbjct: 264 VILMQAQHEKKPDGLDIVNLPNGPHFHFSVSNWVDGKKLPRHANDTGHYPELILNHFKTP 323
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKD 214
LG +L ++LFP PE GR+V+T HNQRD+IF R HRY+F K G K
Sbjct: 324 LGVLTAQLFKNLFPPFPELEGRQVLTLHNQRDYIFVRRHRYVFRDKRETEKPVLGTDGKP 383
Query: 215 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ V +QE GPR TLKL + G G E++W K MD R RF +
Sbjct: 384 I----PGAEDVKVGMQEIGPRMTLKLRRIDRGIQFKSGQEWQW--KGRMDKQRTRFNM 435
>gi|167515528|ref|XP_001742105.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778729|gb|EDQ92343.1| predicted protein [Monosiga brevicollis MX1]
Length = 286
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 125/230 (54%), Gaps = 26/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F EL + PNS RG + + ++++ + D T +++VH +
Sbjct: 83 PKVMLTTSRDPSSRLKQFAKELKLIFPNSQRLNRGGHVMSEMVDVCRANDVTDLVIVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F+L+ +V+R DI N G + P L+ + F+T LG R +
Sbjct: 143 RGQPDGLIVSHLPYGPTAYFQLANVVMRHDIPNAGTMSEAFPHLIFHGFSTALGERATSI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N DFI FRHH Y + KE
Sbjct: 203 LKYLFP-VPKDESKRVITFANDADFISFRHHVYTKKGKE--------------------- 240
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF +KL + GT D + EWV KP + T++++ +L
Sbjct: 241 ----VELAEIGPRFEMKLYQISLGTADQPDADKEWVSKPYLHTAKKKKYL 286
>gi|391338699|ref|XP_003743693.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Metaseiulus occidentalis]
Length = 296
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 122/231 (52%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT S+ F EL + PN+ RGTYDLK++I + D T I+V
Sbjct: 82 PKIVITTTHDPSSSLKQFAKELKLLFPNAQKMNRGTYDLKELITACRANDVTDFIIVQET 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L+I LP GPTA+F + V+R +I + G + P L+ NNF T LG RV ++
Sbjct: 142 RGKPDGLVISHLPYGPTAYFTIYNAVMRHEIPDIGTMSEAYPHLLFNNFTTNLGIRVEKI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV++F N D+I FRHH Y +Q
Sbjct: 202 LKYLFP-VPKENSKRVISFANVDDYILFRHHTY-------------------------NQ 235
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGG-EFEWVHKPEMDTSRRRFFL 272
LQE GPRF LKL ++ G+ D + EW KP M+TSR+R FL
Sbjct: 236 TDGQVELQEVGPRFELKLYDIKLGSIDEAAALDSEWSLKPFMNTSRKRLFL 286
>gi|307210238|gb|EFN86888.1| Probable ribosome production factor 1 [Harpegnathos saltator]
Length = 145
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 109/168 (64%), Gaps = 27/168 (16%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLF 167
+L+I LPDGPTAHFKLS + + ++K +H T H PE++LNN TRLG V R++ +LF
Sbjct: 1 MLVIHLPDGPTAHFKLSNVKITTELKRSHKEITEHRPEVILNNSTTRLGFTVARMLGALF 60
Query: 168 PQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVIT 227
P+F+GRRVVTFHNQRD+IFF+HHRY F K NGK
Sbjct: 61 HYQPQFKGRRVVTFHNQRDYIFFKHHRYEFNLK-------NGK----------------P 97
Query: 228 RLQECGPRFTLKLVSLQHGTFDTKGGEFEWV---HKPEMDTSRRRFFL 272
R E GPRF L+L SLQHGTFD+K G++EW+ + +M+TSRR+ FL
Sbjct: 98 RSPELGPRFILRLKSLQHGTFDSKYGDYEWIIQGQRHDMETSRRKIFL 145
>gi|255544049|ref|XP_002513087.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
gi|223548098|gb|EEF49590.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
Length = 293
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 134/245 (54%), Gaps = 29/245 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+++ ++ PKIL+TT R S F+ EL V PN+ RG + +IIE +
Sbjct: 73 DEYANATEKD--PKILLTTSRNPSAPLIQFVKELKFVFPNAERINRGGQVISEIIESCRA 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELV 147
D+T +I+VH +R PD L+I LP GPTA+F L +V R DIK+ G P L+
Sbjct: 131 HDYTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDIKDKKAIGTMPEAYPHLI 190
Query: 148 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDA 207
LNNF T+LG R +++ LFP P+ +R++TF NQ D+I FRHH Y E G
Sbjct: 191 LNNFKTKLGERTANVLKHLFPM-PKIDAKRIITFANQSDYISFRHHIY-----EKHG--- 241
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
G K+ L+E GPRF ++L ++ GT D EWV +P M+TS+
Sbjct: 242 -GPKS--------------VELKEIGPRFEMRLYQIKLGTMDQNEAHNEWVIRPYMNTSK 286
Query: 268 RRFFL 272
+R F+
Sbjct: 287 KRKFI 291
>gi|212536098|ref|XP_002148205.1| RNA processing factor 1 [Talaromyces marneffei ATCC 18224]
gi|210070604|gb|EEA24694.1| RNA processing factor 1 [Talaromyces marneffei ATCC 18224]
Length = 412
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 136/243 (55%), Gaps = 20/243 (8%)
Query: 39 QGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKD 92
Q +PKILITT ++ A + L S+ PNS Y +R + +K+I ++A ++
Sbjct: 181 QTTSPKILITTAINSTLHHEAKL--LTSLFPNSVYIRRTAHHHAHKFSVKEISKFASNRN 238
Query: 93 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 152
FT++I+V+ ++++ L I+ LP GP HF +S + K + HG + PEL+LNNF
Sbjct: 239 FTALIIVNEDQKKVSGLDIVHLPQGPMFHFSVSNFIEDKKLPGHGTASDAFPELILNNFR 298
Query: 153 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK---ESKGSDANG 209
+ LG L +SL+P P+ R+VVT HNQRD+ F R HRY+F K E D +G
Sbjct: 299 SPLGILTAHLFKSLWPPQPDLAYRQVVTIHNQRDYCFVRRHRYVFREKRETEKPVVDTDG 358
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
K+ K + KT LQE GPR TLKL + G + G E+EW K +M+ +R +
Sbjct: 359 KEIKGVEGIKTG-------LQELGPRMTLKLRRVDKGIQRSSGQEWEW--KGKMEKTRTK 409
Query: 270 FFL 272
F L
Sbjct: 410 FQL 412
>gi|156555275|ref|XP_001603335.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Nasonia vitripennis]
Length = 312
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 127/231 (54%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F+ EL + PNS RG Y++K++I + D T I+VH +
Sbjct: 94 PKIVITTSRDPSSRLKMFVKELRLIFPNSQRMNRGNYEMKQLIHACRANDVTDFIIVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD+L+I LP GPTA+F +S +++R DI + G + P LV +NF T++G R +
Sbjct: 154 RGVPDSLVICHLPYGPTAYFTMSDVIMRHDIPDIGTMSEQYPHLVFHNFKTKIGLRAMSI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I FRHH Y K+ G D
Sbjct: 214 LKYLFP-VPKEDSKRVITFANHDDYISFRHHTY----KKVNGRD---------------- 252
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF-EWVHKPEMDTS-RRRFF 271
L E GPRF LKL ++ GT D EW +P M+TS +RRFF
Sbjct: 253 ----IELSEVGPRFQLKLYEIKLGTLDAAAAADTEWALRPYMNTSHKRRFF 299
>gi|281207352|gb|EFA81535.1| brix domain-containing protein [Polysphondylium pallidum PN500]
Length = 592
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 132/246 (53%), Gaps = 29/246 (11%)
Query: 28 NDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 86
N DE++ + G A PK+ ITT R S+R F EL + PN+ RG + +K I+E
Sbjct: 375 NIDDEYA---RAGIADPKVFITTSRDPSSRLVQFSKELRMLFPNATKMNRGAHVIKDIVE 431
Query: 87 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 146
+ D T +++ H +R EP L++ +P GPTA+F++ V+ DI++ + P L
Sbjct: 432 ACRANDVTDLVIAHEHRGEPVGLVVSHMPYGPTAYFEIVNCVMIHDIQDAPPASLAYPHL 491
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+ NNF T LG R +++ LFP P+ +R+VTF N D+I FRHH Y
Sbjct: 492 IFNNFTTPLGERTETILKYLFP-VPKDDSKRIVTFSNNSDYISFRHHLY----------- 539
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 266
EK + V+ L+E GPRF LKL +Q GT D + EWV+KP M+++
Sbjct: 540 -----------EKDGHKNVL--LKEVGPRFELKLYKIQLGTVDQNEADIEWVYKPYMNST 586
Query: 267 RRRFFL 272
+ R FL
Sbjct: 587 KNRVFL 592
>gi|242023328|ref|XP_002432086.1| U3 small nucleolar ribonucleoprotein IMP4, putative [Pediculus
humanus corporis]
gi|212517460|gb|EEB19348.1| U3 small nucleolar ribonucleoprotein IMP4, putative [Pediculus
humanus corporis]
Length = 311
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 124/231 (53%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F E+ + PNS RG Y++K+II + + T I++H N
Sbjct: 94 PKIVITTSRDPSSRLKMFAKEMKLIFPNSQRINRGNYEMKQIIHACRANEVTDFIILHEN 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L I LP GPTA+F +S +V+R DI + P L+ +NF T+LG RV +
Sbjct: 154 RGKPDGLTICHLPYGPTAYFSMSDVVMRHDIPEIETMSEQFPHLIFHNFTTKLGERVTNI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R++TF N D+I FRHH Y K KD +
Sbjct: 214 LKYLFP-VPKEDSKRIMTFANHDDYISFRHHVY-------------KKVNKDIE------ 253
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
+ E GPRF LKL ++ GT D EWV +P M+TS +R FL
Sbjct: 254 ------ITEVGPRFQLKLYEIKLGTIDALDAASTEWVLRPYMNTSMKRRFL 298
>gi|440801245|gb|ELR22265.1| U3 small nucleolar ribonucleoprotein component, putative
[Acanthamoeba castellanii str. Neff]
Length = 277
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 133/251 (52%), Gaps = 29/251 (11%)
Query: 20 DDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 78
DD F + DE++ + G PK++ITT R S+R F+ EL V PN+ RG
Sbjct: 48 DDPAKFEQSIDDEYA---RAGIRDPKLVITTSRDPSSRLNQFVKELRLVFPNAQKLNRGN 104
Query: 79 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 138
Y LK+++E + + T +++VH +R EPD L++ LP GPTA+F + VLR D+K
Sbjct: 105 YVLKQLVETCRANEVTDLVLVHEHRGEPDGLVVCHLPYGPTAYFGIMNAVLRHDLKERST 164
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFE 198
+ P L+ + F ++LG R ++++ LFP P+ RV+TF N+ DFI FRHH Y
Sbjct: 165 VSQQFPHLIFHKFDSKLGERTMKVLKHLFP-VPKEDAHRVITFANENDFISFRHHTY--- 220
Query: 199 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 258
+K + V L E GPRF LKL ++ GT D + EWV
Sbjct: 221 -------------------KKEGHKNV--ELTEVGPRFELKLYQIKLGTVDMTEADNEWV 259
Query: 259 HKPEMDTSRRR 269
KP M ++R+
Sbjct: 260 LKPFMSNAKRK 270
>gi|194908997|ref|XP_001981875.1| GG11358 [Drosophila erecta]
gi|190656513|gb|EDV53745.1| GG11358 [Drosophila erecta]
Length = 298
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV++F N D I FRHH+Y + KE
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHHQYKYVNKE----------------- 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF+LKL ++ GT + K + EW+++P M+TS++R
Sbjct: 239 --------LELSEVGPRFSLKLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|225713452|gb|ACO12572.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Lepeophtheirus
salmonis]
Length = 310
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F+ E+ ++PNS RG Y+ K++++ + + +++VH +
Sbjct: 95 PKVMLTTSRDPSSRLKKFVKEIKLLVPNSQRINRGNYEFKQLMDACRANEVADVVIVHEH 154
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F LS +V+R DI GN + P LV +NF ++LG R +
Sbjct: 155 RGNPDGLIVCHLPFGPTAYFTLSDIVMRHDIPELGNMSEQYPHLVFHNFKSKLGERCTNI 214
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R +TF N D+I FRHH Y KG N
Sbjct: 215 LKYLFP-VPKEDSKRAMTFANHDDYISFRHHTY------KKGDGKN-------------- 253
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF L+L ++ GT ++ EWV +P M+T+++R F
Sbjct: 254 ----IELSEVGPRFQLRLYEIKLGTLESISAANSEWVLRPYMNTAKKRGFF 300
>gi|195504523|ref|XP_002099116.1| GE23555 [Drosophila yakuba]
gi|194185217|gb|EDW98828.1| GE23555 [Drosophila yakuba]
Length = 298
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV++F N D I FRHH+Y + KE
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHHQYKYVNKE----------------- 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF+LKL ++ GT + K + EW+++P M+TS++R
Sbjct: 239 --------LELSEVGPRFSLKLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|312373784|gb|EFR21471.1| hypothetical protein AND_17009 [Anopheles darlingi]
Length = 313
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 125/235 (53%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI+ITT R S+R F+ EL + PN+ RG ++ K+++ + + T I+
Sbjct: 91 GCEDPKIMITTSRDPSSRLKQFVKELRLIFPNAQRMNRGNFETKQLVHACRANNVTDFII 150
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD L+I LP GPTA F +S +V+R DI + G + P LV +NF T+L R
Sbjct: 151 VHEHRGVPDNLIICHLPYGPTASFNMSGVVMRHDIPDIGPMSEQKPHLVFHNFKTKLAER 210
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++ LFP P+ +RV+TF N DFI FRHH Y +E
Sbjct: 211 TMSILRYLFP-VPKEDSKRVITFANHDDFISFRHHTYRMVDRE----------------- 252
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT D + EWV++P M+T+ +R FL
Sbjct: 253 --------LELTEVGPRFQLKLYQIKLGTLDELDAADTEWVYRPYMNTAAKRRFL 299
>gi|213407280|ref|XP_002174411.1| U3 snoRNP-associated protein Imp4 [Schizosaccharomyces japonicus
yFS275]
gi|212002458|gb|EEB08118.1| U3 snoRNP-associated protein Imp4 [Schizosaccharomyces japonicus
yFS275]
Length = 289
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 124/231 (53%), Gaps = 26/231 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+ +I ++ PK+L+TT R S+R F E+ +IPN++ RG + ++E A+
Sbjct: 74 DEYGTIGER--EPKVLVTTSREPSSRLAQFAKEMRLLIPNAYRLNRGNIVVGSLVEAARA 131
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
D T I+V+H +R PD L+I LP GPT F L +VLR DI N G + P L+ +N
Sbjct: 132 NDVTDIVVLHEHRGNPDGLVISHLPYGPTVSFTLHNVVLRHDIPNTGTMSEAYPHLIFHN 191
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
T+LG R +++ +LFP P+ RVVTF N D+I FRHH Y+
Sbjct: 192 LTTKLGKRTQKVLSALFPPEPKDTTPRVVTFANNSDYISFRHHVYV-------------- 237
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
K+ + V+ L E GPRF ++L ++ GT D + + EW KP
Sbjct: 238 --------KSGPKDVV--LSEVGPRFEMRLYEIRLGTLDMEDADVEWKLKP 278
>gi|195354762|ref|XP_002043865.1| GM17799 [Drosophila sechellia]
gi|194129103|gb|EDW51146.1| GM17799 [Drosophila sechellia]
Length = 298
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV++F N D I FRHH+Y + KE
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHHQYKYVNKE----------------- 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF+LKL ++ GT + K + EW+++P M+TS++R
Sbjct: 239 --------LELSEVGPRFSLKLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|347970855|ref|XP_308117.4| AGAP003890-PA [Anopheles gambiae str. PEST]
gi|333466404|gb|EAA03875.4| AGAP003890-PA [Anopheles gambiae str. PEST]
Length = 313
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 126/235 (53%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI+ITT R S+R F+ EL + PN+ RG +++K+++ + + T IV
Sbjct: 91 GCEDPKIMITTSRDPSSRLVQFVKELRLIFPNAQRMNRGNFEMKQLVHACRANNVTDFIV 150
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH + PD L+I LP GPTA F +S +V+R DI + G + P L+ +NF T+L R
Sbjct: 151 VHEHSGVPDNLVICHLPYGPTASFNISGVVMRHDIPDIGTMSEQKPHLIFHNFKTKLAER 210
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++ LFP P+ +RV+TF N DFI FRHH + K+
Sbjct: 211 TMSILRYLFP-VPKEDSKRVMTFANHDDFISFRHHTFRMVDKQ----------------- 252
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L ECGPRF LKL ++ GT D + EWV++P M+T+ +R FL
Sbjct: 253 --------LELTECGPRFQLKLYQIKLGTVDELDAADTEWVYRPYMNTAAKRRFL 299
>gi|303288804|ref|XP_003063690.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454758|gb|EEH52063.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 289
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 126/231 (54%), Gaps = 30/231 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+L+TT R S+R F+ E+ ++P + RG L ++E + DFT +++VH +
Sbjct: 83 PKVLVTTSRDPSSRLTQFVKEVKLLMPTAQRVNRGAQVLPDLVELCRSNDFTDLVMVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI----PELVLNNFATRLGHR 158
R EPD L++ +P GPTA+F LS V+R DIK+ GH+ P L+L NF T LG R
Sbjct: 143 RGEPDGLVVSHMPFGPTAYFGLSGTVMRHDIKDED--IGHVSEVNPHLILENFNTTLGQR 200
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
V +++ LFP +P + +RV+TF NQ D+I RHH Y + KD+ S
Sbjct: 201 VKTILRHLFP-APRTKSKRVITFANQNDYISMRHHTYEM------------PRGKDSVS- 246
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L E GPRF +KL ++ GT D + EW +P M + ++R
Sbjct: 247 ----------LTEIGPRFEMKLYQIKLGTIDADDADVEWALRPFMRSGKKR 287
>gi|297826219|ref|XP_002880992.1| hypothetical protein ARALYDRAFT_901791 [Arabidopsis lyrata subsp.
lyrata]
gi|297326831|gb|EFH57251.1| hypothetical protein ARALYDRAFT_901791 [Arabidopsis lyrata subsp.
lyrata]
Length = 254
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 134/244 (54%), Gaps = 26/244 (10%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNS----NRGPAFISELLSVIPNSHYYK 75
DDD+L+AG D +E IL P+ LIT+ F + RGP EL+SV+PNS Y +
Sbjct: 18 DDDKLWAGFDWEETDKILSGEIKPRTLITSYPFPAIRYPQRGPLIAQELVSVVPNSCYVR 77
Query: 76 RGTYD-LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 134
RG L ++I AKK+ FTS+I+ HTN R D L+II L +G +A F++ + R +I
Sbjct: 78 RGIRSKLHEVIAKAKKRHFTSLILTHTNPRGHDELIIISLLNGASAVFRVIDFIPRAEIP 137
Query: 135 NHGNPTGH--IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
N NP PEL + +F ++ R+IQ+LFP+ P GR + F Q + IFFR
Sbjct: 138 NCANPLSRRIYPELHMKSFDSQASVGTARMIQALFPKVPSSGGRPIAWFQKQNNHIFFRS 197
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
HR+ +E S S + ++ QECGPRF LKL +++ +FDT
Sbjct: 198 HRFCYEEPLSGESSSVRRQP-----------------QECGPRFALKLRAVERVSFDT-- 238
Query: 253 GEFE 256
G+F+
Sbjct: 239 GKFK 242
>gi|367028002|ref|XP_003663285.1| hypothetical protein MYCTH_2305019 [Myceliophthora thermophila ATCC
42464]
gi|347010554|gb|AEO58040.1| hypothetical protein MYCTH_2305019 [Myceliophthora thermophila ATCC
42464]
Length = 427
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 126/247 (51%), Gaps = 22/247 (8%)
Query: 41 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFT 94
PKIL+TT + A E+ SV PN+ Y R Y +++I ++AK + +T
Sbjct: 188 VMPKILVTTGLNGTIHKEA--QEIASVFPNATYIPRSAHRYSYKYSVREIAKFAKNRGYT 245
Query: 95 SIIVVHTNRREPDALLII-----GLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 149
+++VV + + P L + G+P GPT + + K I HGNPT H PEL+LN
Sbjct: 246 ALLVVQEDLKRPSQLSVCHLNGEGVPPGPTLTYTIRNYQPGKAIVGHGNPTNHYPELLLN 305
Query: 150 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
F T LG + + +LFP PE GR+VVT HNQRD+IFFR HRY+F + G
Sbjct: 306 GFKTPLGLLAAKSMNTLFPPKPELAGRQVVTLHNQRDYIFFRRHRYVFREARPTEKNVQG 365
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDT 265
KD + K + LQE GPR TLKL + G G E E W K +M+
Sbjct: 366 ADGKDLEGVKG----IRAGLQEIGPRMTLKLRRVDKG-VGRAGSEGEDALKWEWKAKMEK 420
Query: 266 SRRRFFL 272
R RF L
Sbjct: 421 KRTRFNL 427
>gi|24649922|ref|NP_651335.2| CG11920 [Drosophila melanogaster]
gi|7301265|gb|AAF56395.1| CG11920 [Drosophila melanogaster]
gi|237513040|gb|ACQ99845.1| FI08810p [Drosophila melanogaster]
Length = 298
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV++F N D I FRHH+Y + KE
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHHQYKYVNKE----------------- 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF+LKL ++ GT + K + EW+++P M+TS++R
Sbjct: 239 --------LELTEVGPRFSLKLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|195573729|ref|XP_002104844.1| GD21170 [Drosophila simulans]
gi|194200771|gb|EDX14347.1| GD21170 [Drosophila simulans]
Length = 298
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 128/235 (54%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
+H +R PD+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 IHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV++F N D I FRHH+Y + KE
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHHQYKYVNKE----------------- 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF+LKL ++ GT + K + EW+++P M+TS++R
Sbjct: 239 --------LELSEVGPRFSLKLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|209731356|gb|ACI66547.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
gi|221221716|gb|ACM09519.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
gi|303660596|gb|ADM16000.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
Length = 291
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 128/231 (55%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F+ E+ + P + RG +++K +++ K + T +++VH
Sbjct: 83 PKVMVTTSRDPSSRLKMFVKEVKLIFPGAQRMNRGGHEIKALVQACKANNVTDLVIVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFSSRLGQRVSNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ DFI FRHH Y +KT
Sbjct: 203 LKYLFP-VPKEDSRRVITFANQEDFISFRHHTY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + + EW H T+++R FL
Sbjct: 240 RNV--ELSEVGPRFEIKLYMIKLGTLENEATADVEWRHHSYTHTAKKRKFL 288
>gi|384253434|gb|EIE26909.1| Brix-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 297
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 121/219 (55%), Gaps = 27/219 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKILITT R S+R F EL V PN+ RG + +++E + DFT I+VVH +
Sbjct: 83 PKILITTSRDPSSRLTQFAKELKLVFPNAQRINRGGQIISELVETCRSHDFTDIVVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRLGHRV 159
R EP+ +++ LP GPTA F + VLR DI K G + P L++NNF++RLG RV
Sbjct: 143 RGEPNGMVVCHLPYGPTAFFGVYNTVLRHDIGEKKKVGTISEACPHLIINNFSSRLGERV 202
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
G +++ LFP P+ +RV++ NQ D+I FRHH Y + + AKS
Sbjct: 203 GNILKYLFP-CPKDDSKRVISLVNQADYISFRHHTY--------------EMPRGAKS-- 245
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 258
L ECGPRF LK+ ++ GT D + E EWV
Sbjct: 246 -------VVLTECGPRFELKIYQIRLGTLDQQHAENEWV 277
>gi|397643428|gb|EJK75859.1| hypothetical protein THAOC_02411 [Thalassiosira oceanica]
Length = 299
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 125/231 (54%), Gaps = 24/231 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++ +TT R S+R F E+ ++PNS RGT + ++++ K DFT +IV
Sbjct: 92 PRVCVTTSRSPSSRLKQFAKEMKLIVPNSTRINRGTQRVDELVDVCKTSDFTDLIVFQET 151
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 161
R EPD +++ LP GPTA+F LS VLR D++ P P L+LNNF T+LG RVG
Sbjct: 152 RGEPDGMVVCHLPLGPTAYFTLSGGVLRHDLEGGAAPMSEAYPHLILNNFNTQLGRRVGN 211
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFP P+ RRV+TF N D I FRHH Y + G K D
Sbjct: 212 ILKCLFP-IPKPDTRRVITFANDDDHISFRHHVY----------NKEGHKEDDLT----- 255
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF ++L ++ GT D K + E+V +P M+T+ ++ L
Sbjct: 256 -------LYEVGPRFEMRLYQIKLGTLDMKDADNEYVLRPYMNTAGKKAML 299
>gi|363808124|ref|NP_001242221.1| uncharacterized protein LOC100814677 [Glycine max]
gi|255634440|gb|ACU17585.1| unknown [Glycine max]
Length = 293
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 128/234 (54%), Gaps = 29/234 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKIL+TT R S F+ EL V PN+ RG + +IIE + D+T +++VH +
Sbjct: 83 PKILLTTSRDPSAPLQQFVKELSFVFPNAQRMNRGGQVISEIIESCRAHDYTDVVLVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPE----LVLNNFATRLGHR 158
R PD L++ LP GPTA+F L +V R +IK+ G IPE L+LNNF+T+LG R
Sbjct: 143 RGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIKDK-KAIGTIPEAYPHLILNNFSTKLGDR 201
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++ LFP P+ +R+V F NQ +I FRHH Y E
Sbjct: 202 TANIMKHLFP-VPKLDTKRIVMFANQSGYISFRHHIY----------------------E 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K K I L+E GPRF L+L ++ GT D + EW+ +P M+T+++R FL
Sbjct: 239 KNGSPKSI-ELKEIGPRFELRLYQIKLGTVDQAEAQIEWIIRPYMNTTKKRKFL 291
>gi|326430621|gb|EGD76191.1| U3 small nucleolar ribonucleoprotein IMP4 [Salpingoeca sp. ATCC
50818]
Length = 283
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 127/230 (55%), Gaps = 26/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I+ITT R S R F E+ + P + RG LK++++ + + T +I+VH
Sbjct: 80 PRIMITTSRDPSARLKQFTKEMKLLFPTAQRLNRGGTILKELVQVCRDIEVTDLIIVHER 139
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD L++ +P GPTA+F LS +V+R DI++ G + P L+ + F+T LG RV +
Sbjct: 140 RGEPDGLIVSHMPYGPTAYFTLSNVVMRHDIEDPGKMSEANPHLIFHGFSTPLGERVTSI 199
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P RRV+TF N D+I FRHH Y KK K+ +
Sbjct: 200 LKFLFP-VPRDDTRRVMTFANDSDYISFRHHVYT-------------KKGKEVE------ 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF +KL ++ GT D + EWV++P M+T+++R FL
Sbjct: 240 ------LAEIGPRFEMKLYHIKLGTVDQDDADTEWVYRPYMNTAKKRTFL 283
>gi|224075818|ref|XP_002304782.1| predicted protein [Populus trichocarpa]
gi|222842214|gb|EEE79761.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 136/246 (55%), Gaps = 31/246 (12%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE++ ++ PKIL+TT R S F+ EL V PN+ RG + +IIE +
Sbjct: 73 DEYAKATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAERINRGGQVISEIIESCRA 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN----PTGHIPEL 146
D+T +I+VH +R PD L+I LP GPTA+F+L +V R DIK+ P H P L
Sbjct: 131 HDYTDVILVHEHRGVPDGLVICHLPFGPTAYFELLNVVTRHDIKDKKAIGTMPEAH-PHL 189
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+LNNF ++LG R +++ LFP P+ +R++TF NQ D+I FRHH Y E G
Sbjct: 190 ILNNFKSKLGERTANILKHLFPM-PKPDTKRIITFANQSDYISFRHHIY-----EKHG-- 241
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 266
G K+ L+E GPRF ++L ++ GT D + EWV +P M+T+
Sbjct: 242 --GPKS--------------VELKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTT 285
Query: 267 RRRFFL 272
++R F+
Sbjct: 286 KKRKFI 291
>gi|197632087|gb|ACH70767.1| U3 small nucleolar ribonucleoprotein [Salmo salar]
gi|209733470|gb|ACI67604.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
Length = 291
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F+ E+ + P + RG +++ +++ K + T +++VH
Sbjct: 83 PKVMVTTSRDPSSRLKMFVKEVKLIFPGAQRMNRGGHEINALVQACKANNVTDLVIVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFSSRLGQRVSNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRVVTF NQ DFI FRHH Y +KT
Sbjct: 203 LKYLFP-VPKEDSRRVVTFANQEDFISFRHHTY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + + EW H T+++R FL
Sbjct: 240 KNV--ELSEVGPRFEMKLYMIKLGTLENEATADVEWRHHSYTHTAKKRKFL 288
>gi|17544642|ref|NP_502404.1| Protein ZK795.3 [Caenorhabditis elegans]
gi|6226467|sp|O62518.1|YHPK_CAEEL RecName: Full=Brix domain-containing protein ZK795.3
gi|3881873|emb|CAB05841.1| Protein ZK795.3 [Caenorhabditis elegans]
Length = 292
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 33/275 (12%)
Query: 5 TIENTREPDETVCRPDDDELFAGNDAD----EFSSILKQGCA--PKILITTCRFNSNRGP 58
+EN + D + R D EL G+D E S + A PKI+ITT R S+R
Sbjct: 35 ALENNTKIDYNL-RKDAIELAKGSDWGGQQYETDSEYRWAGAQDPKIVITTSRDPSSRLK 93
Query: 59 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
F E+ + PN+ RG YD+K++++ +K +D T +I+ R PD +L+ LP GP
Sbjct: 94 MFAKEMKLIFPNAQRINRGHYDVKQVVQASKAQDSTDLIIFTETRGNPDGMLVCHLPFGP 153
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
TA F ++ +V+R DI N G + P L+ +N ++LGHR +++ LFP P+ +R+
Sbjct: 154 TAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGHRFTTILKHLFP-VPKPDSKRI 212
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
+TF N D+I FRHH Y K D + E L E GPRF L
Sbjct: 213 ITFSNSEDYISFRHHVY--------------KTENDGEVE----------LTEAGPRFEL 248
Query: 239 KLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
K ++ GT +T E EWV + +T+R+R FL
Sbjct: 249 KPYQIKLGTLETLAAAEDEWVLRSYTNTARKRTFL 283
>gi|440468847|gb|ELQ37981.1| brix domain-containing protein [Magnaporthe oryzae Y34]
gi|440484736|gb|ELQ64765.1| brix domain-containing protein [Magnaporthe oryzae P131]
Length = 426
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 27/259 (10%)
Query: 30 ADEFSSILKQGC--APKILITTC-RFNSNRGPAFISELLSVIPNSHYYKRGT------YD 80
A +F ++ +G PKIL+TT R +R I+ S+ PNS Y R + Y
Sbjct: 179 ARKFPTLFTEGPHPTPKILVTTSLRATIHREAQIIT---SLFPNSQYVPRSSHRYGHKYS 235
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 140
L++I +++ +DFT++I++ ++++P + ++ LP+GPT HF ++ + + HGN
Sbjct: 236 LREICKFSTNRDFTAVILIREDQKKPTGMTVVHLPEGPTFHFTINNWIEGSKLPGHGNSQ 295
Query: 141 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
G PEL+LN F T LG +L++ LFP PE GR VVT HNQRD++F R HRY++ +
Sbjct: 296 GFYPELLLNRFTTPLGLLTAQLLRRLFPYQPEIAGREVVTIHNQRDYLFVRRHRYVYRER 355
Query: 201 ---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE--- 254
E D GK E + LQE GPRFTLKL + G G E
Sbjct: 356 RQTEKTVVDEEGK-------EIPGFSDIRVGLQEIGPRFTLKLRRVDKG-IGRAGSEGDD 407
Query: 255 -FEWVHKPEMDTSRRRFFL 272
+W K M+ R +F L
Sbjct: 408 AVQWEWKAGMEKVRTKFNL 426
>gi|302410787|ref|XP_003003227.1| brix domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261358251|gb|EEY20679.1| brix domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 412
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 122/209 (58%), Gaps = 12/209 (5%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSII 97
KILITT ++ A I ++ PNS+Y +R Y L++I +A +++T+++
Sbjct: 189 KILITTSLNSTLHHEADI--FCTLFPNSNYIRRTQHHYGHKYSLREISRFAANREYTAVV 246
Query: 98 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGH 157
++ +++ L ++ LP GPT F ++ + K + HGNPT H PEL+LNNF T LG
Sbjct: 247 MLREDQKVLTGLTVVHLPSGPTFTFSVTNFMEGKKLPGHGNPTNHYPELLLNNFKTPLGM 306
Query: 158 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKS 217
+L Q+LFP PEF GR+V+T HNQRD++F+R HRY+F K + + + KD +
Sbjct: 307 LTAKLFQTLFPPQPEFVGRQVLTVHNQRDYLFWRRHRYVFRDKRTTEKNITTAEGKDLE- 365
Query: 218 EKTSQQKVITRLQECGPRFTLKLVSLQHG 246
+ + LQE GPRFTLKL + G
Sbjct: 366 ---GVEGIRVGLQEVGPRFTLKLRRVDKG 391
>gi|389639260|ref|XP_003717263.1| brix domain-containing protein [Magnaporthe oryzae 70-15]
gi|351643082|gb|EHA50944.1| brix domain-containing protein [Magnaporthe oryzae 70-15]
Length = 452
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 27/259 (10%)
Query: 30 ADEFSSILKQGC--APKILITTC-RFNSNRGPAFISELLSVIPNSHYYKRGT------YD 80
A +F ++ +G PKIL+TT R +R I+ S+ PNS Y R + Y
Sbjct: 205 ARKFPTLFTEGPHPTPKILVTTSLRATIHREAQIIT---SLFPNSQYVPRSSHRYGHKYS 261
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 140
L++I +++ +DFT++I++ ++++P + ++ LP+GPT HF ++ + + HGN
Sbjct: 262 LREICKFSTNRDFTAVILIREDQKKPTGMTVVHLPEGPTFHFTINNWIEGSKLPGHGNSQ 321
Query: 141 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
G PEL+LN F T LG +L++ LFP PE GR VVT HNQRD++F R HRY++ +
Sbjct: 322 GFYPELLLNRFTTPLGLLTAQLLRRLFPYQPEIAGREVVTIHNQRDYLFVRRHRYVYRER 381
Query: 201 ---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE--- 254
E D GK E + LQE GPRFTLKL + G G E
Sbjct: 382 RQTEKTVVDEEGK-------EIPGFSDIRVGLQEIGPRFTLKLRRVDKG-IGRAGSEGDD 433
Query: 255 -FEWVHKPEMDTSRRRFFL 272
+W K M+ R +F L
Sbjct: 434 AVQWEWKAGMEKVRTKFNL 452
>gi|296531435|ref|NP_001171858.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Saccoglossus
kowalevskii]
Length = 292
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 127/231 (54%), Gaps = 25/231 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ P + RG Y++ I++ + D T +IV+H +
Sbjct: 83 PKIMVTTSREPSSKLKRFAKEMKLTFPTAQRMNRGHYEVSHIVQACRANDVTDLIVLHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD ++I LP GPTA+F LS V+R DI + G + P L+ +NF ++LG RV +
Sbjct: 143 RGEPDGMIICHLPYGPTAYFTLSNTVMRHDIPDIGTMSEAYPHLIFHNFNSKLGERVQNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF NQ D+I FRHH Y KK ++ K
Sbjct: 203 LKYLFP-VPKDESKRVITFANQEDYISFRHHVY--------------KKIENGKD----- 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
L+E GPRF +KL ++ GT + + EW KP M+T+++R L
Sbjct: 243 ----IELKEIGPRFEMKLYEIKLGTLEEASTADIEWKLKPYMNTAKKRKHL 289
>gi|224053310|ref|XP_002297757.1| predicted protein [Populus trichocarpa]
gi|222845015|gb|EEE82562.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 137/246 (55%), Gaps = 31/246 (12%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE++ ++ PKIL+TT R S F+ EL V PN+ RG + +IIE +
Sbjct: 73 DEYAKATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAERINRGGQVISEIIESCRA 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPE----L 146
D+T +I+VH +R PD L+I LP GPTA+F+L +V R DIK+ G +PE L
Sbjct: 131 HDYTDVILVHEHRGVPDGLVICHLPFGPTAYFELLNVVTRHDIKD-KKAIGTMPEAPPHL 189
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+LNNF ++LG R +++ LFP P+ +R++TF NQ D+I FRHH Y E G
Sbjct: 190 ILNNFKSKLGERTANILKHLFPM-PKPDTKRIITFANQSDYISFRHHIY-----EKHG-- 241
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 266
G K+ L+E GPRF ++L ++ GT D + EWV +P M+T+
Sbjct: 242 --GPKS--------------VELKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTT 285
Query: 267 RRRFFL 272
++R F+
Sbjct: 286 KKRKFI 291
>gi|118483045|gb|ABK93432.1| unknown [Populus trichocarpa]
Length = 293
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 136/246 (55%), Gaps = 31/246 (12%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE++ ++ PKIL+TT R S F+ EL V PN+ RG + +IIE +
Sbjct: 73 DEYAKATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAERINRGGQVISEIIESCRA 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN----PTGHIPEL 146
D+T +I+VH +R PD L+I +P GPTA+F+L +V R DIK+ P H P L
Sbjct: 131 HDYTDVILVHEHRGVPDGLVICHIPFGPTAYFELLNVVTRHDIKDKKAIGTMPEAH-PHL 189
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+LNNF ++LG R +++ LFP P+ +R++TF NQ D+I FRHH Y E G
Sbjct: 190 ILNNFKSKLGERTANILKHLFPM-PKPDTKRIITFANQSDYISFRHHIY-----EKHG-- 241
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 266
G K+ L+E GPRF ++L ++ GT D + EWV +P M+T+
Sbjct: 242 --GPKS--------------VELKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTT 285
Query: 267 RRRFFL 272
++R F+
Sbjct: 286 KKRKFI 291
>gi|449684830|ref|XP_004210727.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Hydra magnipapillata]
Length = 227
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 122/230 (53%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT S+R F EL ++PNS RG Y L +++ K D T +++ H +
Sbjct: 13 PKLMITTSHNPSSRLKQFAKELKLILPNSQRLNRGNYVLSQLVTACKANDVTDLVIAHEH 72
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L+I LP GPTA+F LS ++R DI + G + P L+ +NF T+LG RV +
Sbjct: 73 RGNPDGLIICHLPFGPTAYFSLSNTIMRHDIPDVGKMSEAFPHLIFHNFQTKLGTRVQNI 132
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N+ DFI FRHH Y K D ++
Sbjct: 133 LRYLFP-VPKEDSKRVITFANKNDFISFRHHTY---------------KKVDGRN----- 171
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT D + EW K M TS +R +L
Sbjct: 172 ----IELTEVGPRFELKLHEIRLGTLDQAEADKEWKLKTYMRTSHKRKYL 217
>gi|449451998|ref|XP_004143747.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cucumis sativus]
Length = 293
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 131/255 (51%), Gaps = 38/255 (14%)
Query: 21 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 80
DDE ++ D PKILITT R S F EL V PN+ RG
Sbjct: 72 DDEYANASEVD-----------PKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHG 137
+ +IIE + +FT +I+VH +R PD L+I LP GPTA+F L +V R +I K G
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKTMG 180
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
P ++LNNF T+LG R +++ LFP P+ +RVVTF NQ D+I FRHH Y
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFP-VPKPDTKRVVTFANQSDYISFRHHIY-- 237
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
+K AKS L+E GPRF L+L ++ GT D + EW
Sbjct: 238 ------------EKHGGAKS---------IELKEIGPRFELRLYQIKLGTVDQTEAQNEW 276
Query: 258 VHKPEMDTSRRRFFL 272
V +P M T+++R FL
Sbjct: 277 VIRPYMKTTKKRDFL 291
>gi|225711812|gb|ACO11752.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Caligus
rogercresseyi]
Length = 310
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 125/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F+ E+ +IPNS RG ++ K+++E + + T I++VH +
Sbjct: 95 PKVMLTTSREPSSRLKKFVKEIKLLIPNSQRINRGNHEFKQLVEACRANEVTDIVIVHEH 154
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA F LS +V+R DI G + P LV +NF + +G R +
Sbjct: 155 RGNPDGLIVCHLPFGPTAFFTLSDIVMRHDIPELGCMSEQYPHLVFHNFKSTIGERCMNI 214
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N DFI FRHH Y KG N
Sbjct: 215 LKYLFP-VPKEDSKRVMTFANHDDFISFRHHTY------KKGDGKN-------------- 253
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPR L+L ++ GT ++ EWV +P M+T+++R FL
Sbjct: 254 ----IELSEVGPRLQLRLYEIKLGTLESIAAANSEWVLRPYMNTAKKRRFL 300
>gi|388583068|gb|EIM23371.1| Brix-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 288
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 125/232 (53%), Gaps = 27/232 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKILITT R S+R F EL V PNS + RG Y +K+I + A+ T +I++H
Sbjct: 82 PKILITTARDPSSRLTTFAKELRLVFPNSIRFNRGNYVVKEIADAARANQVTDLIIIHET 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R +PDALL+ P GPT F L+ + LR D+ + T P L+ NF+++LG+R+
Sbjct: 142 RGKPDALLLSHFPHGPTVTFTLNNVQLRHDLAGSLDSTVSEQYPHLIFENFSSKLGNRIM 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
++ LFP P+ +RV+TF+N DFI FRHH Y+ KT
Sbjct: 202 NTLKYLFP-VPKEDSKRVMTFYNDADFISFRHHVYV----------------------KT 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
S ++V +L E GPRF LK ++ GT + + EWV +P T+ RR L
Sbjct: 239 SHKEV--QLAEVGPRFELKPYEIKQGTIENTAADTEWVLRPYQRTASRRRLL 288
>gi|157112156|ref|XP_001657418.1| U3 small nucleolar ribonucleoprotein protein imp4 [Aedes aegypti]
gi|108878165|gb|EAT42390.1| AAEL006063-PA [Aedes aegypti]
Length = 313
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 128/235 (54%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI+ITT R S + F+ EL + PN+ RG +++K++I + + T IV
Sbjct: 91 GCEDPKIMITTSRDPSAKLKQFVKELRLLFPNAQRMNRGNFEMKQLIHACRANNVTDFIV 150
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD L+I LP GPTA F LS +V+R DI G + P L+ +NF T+L R
Sbjct: 151 VHEHRGVPDNLIICHLPYGPTASFNLSGVVMRHDIPEIGPMSEQKPHLIFHNFKTKLAER 210
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++ LFP P+ +RV+TF N D+I FRHH +
Sbjct: 211 TMSVLKYLFP-VPKEDSKRVMTFANHDDYISFRHHTF----------------------- 246
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
KT ++++ L E GPRF LKL ++ GT D + EWV++P M+T+ +R FL
Sbjct: 247 KTVDREMV--LTEVGPRFMLKLYQIKLGTLDELDAADTEWVYRPYMNTASKRRFL 299
>gi|328770964|gb|EGF81005.1| hypothetical protein BATDEDRAFT_88074 [Batrachochytrium
dendrobatidis JAM81]
Length = 285
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 125/230 (54%), Gaps = 26/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+L+TT R S+R F EL + PNS RG Y ++ I++ +K D T +I++H +
Sbjct: 82 PKVLLTTSRDPSSRLTMFSKELKLMFPNSQRMNRGNYIIEDIVDACRKSDATDLIILHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD ++I P GPTA+F L +VLR DI + G + P L+ NF ++LG RV +
Sbjct: 142 RGQPDGMVISHFPYGPTAYFTLHNVVLRHDIPDRGTVSEQFPHLIFENFNSKLGQRVQNI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I +RHH + +G+
Sbjct: 202 LKYLFP-VPKEDSKRVMTFANSSDYISYRHHVFY---------KVDGE------------ 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L E GPRF ++L ++ GT D K + EWV +P T+++R L
Sbjct: 240 ----IQLAEVGPRFEMRLYEIKQGTVDIKEADTEWVFRPYQRTAKKRDVL 285
>gi|94469098|gb|ABF18398.1| U3 small nucleolar ribonucleoprotein component [Aedes aegypti]
Length = 313
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 128/235 (54%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI+ITT R S + F+ EL + PN+ RG +++K++I + + T IV
Sbjct: 91 GCEDPKIMITTSRDPSAKLKQFVKELRLLFPNAQRMNRGNFEMKQLIHACRANNVTDFIV 150
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD L+I LP GPTA F LS +V+R DI G + P L+ +NF T+L R
Sbjct: 151 VHEHRGVPDNLIICHLPYGPTASFNLSGVVMRHDIPEIGPMSEQKPHLIFHNFKTKLAER 210
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++ LFP P+ +RV+TF N D+I FRHH +
Sbjct: 211 TMSVLKYLFP-VPKEDSKRVMTFANHDDYISFRHHTF----------------------- 246
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
KT ++++ L E GPRF LKL ++ GT D + EWV++P M+T+ +R FL
Sbjct: 247 KTVDREMV--LTEVGPRFMLKLYQIKLGTLDELDAADTEWVYRPYMNTAAKRRFL 299
>gi|148227362|ref|NP_001084730.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Xenopus
laevis]
gi|46329757|gb|AAH68917.1| MGC83136 protein [Xenopus laevis]
Length = 291
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F E+ + PN+ RG +++ +++ + D T +++VH
Sbjct: 83 PKIMITTSRDPSSRLKIFAKEMRLIFPNAQRMNRGKHEVGALVQACRANDVTDLLIVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F L +V+R DI + G + P L+ +NF +RLG RV +
Sbjct: 143 RGMPDGLIVCHLPFGPTAYFTLCNVVMRHDIPDLGTMSEANPHLIFHNFTSRLGQRVADI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RVVTF NQ D+I FRHH Y +KT
Sbjct: 203 MKYLFP-VPKDESKRVVTFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + E EW P +T+++R +L
Sbjct: 240 KNV--ELSEVGPRFEMKLYMIKLGTLENESTAEVEWRWHPYTNTAKKRKYL 288
>gi|170035194|ref|XP_001845456.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Culex
quinquefasciatus]
gi|167877008|gb|EDS40391.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Culex
quinquefasciatus]
Length = 311
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 131/235 (55%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI+ITT R S + F+ E+ + PN+ RG +++K++I + + T IV
Sbjct: 91 GCEDPKIMITTSRDPSAKLKQFVKEIRLIFPNAQRMNRGNFEMKQLIHACRANNVTDFIV 150
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
+H +R PD L+I LP GPTA F LS +V+R DI + G + P L+ +NF T+L R
Sbjct: 151 IHEHRGVPDNLIICHLPYGPTACFNLSGVVMRHDIPDIGPMSEQKPHLIFHNFKTKLAER 210
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++ LFP P+ +RV+TF N D+I FRHH +
Sbjct: 211 TMSILKYLFP-VPKEESKRVMTFANHDDYISFRHHTF----------------------- 246
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
KT +++++ + E GPRF LKL ++ GT D + + EWV++P M+T+ +R FL
Sbjct: 247 KTVERELV--MTEVGPRFQLKLYQIKLGTLDELEAADTEWVYRPYMNTAGKRRFL 299
>gi|443700555|gb|ELT99436.1| hypothetical protein CAPTEDRAFT_19360 [Capitella teleta]
Length = 334
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S++ F E+ + PNS RG Y++ ++++ + D T +I++ +
Sbjct: 122 PKLVVTTSRDPSSKLKQFAKEIKLIFPNSQRINRGKYEMNQLVQACRANDVTDLIILTEH 181
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD +LI LP GPTA+F LS V+R DI + G + P LV + F+++LG RV +
Sbjct: 182 RGNPDGMLISHLPYGPTAYFNLSNAVMRHDIPDIGTMSEAYPHLVFHKFSSKLGARVRNI 241
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +R++TF N D+I FRHH Y K S+
Sbjct: 242 LKYLFP-VPKEDSKRIITFANDDDYISFRHHTY-----------------------KRSE 277
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
K I L E GPRF +KL + GT + + EWV+KP M T+++R FL
Sbjct: 278 TKEIV-LDEVGPRFEMKLFKIVLGTIEMADSADIEWVYKPYMRTTKKRKFL 327
>gi|302839990|ref|XP_002951551.1| hypothetical protein VOLCADRAFT_61433 [Volvox carteri f.
nagariensis]
gi|300263160|gb|EFJ47362.1| hypothetical protein VOLCADRAFT_61433 [Volvox carteri f.
nagariensis]
Length = 311
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 27/229 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+LITT R S+R F E+ VIPNS RG LK++++ + DFT I+V+H +
Sbjct: 83 PKVLITTSRDPSSRLTQFAKEVKLVIPNSQRINRGGLILKELVDTCRTHDFTDIVVLHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRLGHRV 159
R EPD +++ LP GPTA+F + VLR DI K G + P L+ +N ++LG R
Sbjct: 143 RGEPDGMVVCHLPYGPTAYFGIFNTVLRHDIGQKKEVGTISEAYPHLITDNLGSKLGQRT 202
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ +R+V+F N+ DFI FRHH Y E KG+ +
Sbjct: 203 ANILKHLFP-VPKDDSKRIVSFANRNDFISFRHHTY----SEPKGASS------------ 245
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
L ECGPRF LKL ++ GT D E EWV + ++R
Sbjct: 246 -------IELTECGPRFELKLYQIKLGTMDQSHAENEWVLRAYTRNTKR 287
>gi|340959320|gb|EGS20501.1| hypothetical protein CTHT_0023330 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 436
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 128/245 (52%), Gaps = 22/245 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT + A E+ S+ PN+ Y +R Y +++I ++AK + +T++
Sbjct: 199 PKILVTTGINGTIHKEA--EEIASIFPNATYIRRTAHRYAYKYSVREIAKFAKNRGYTAL 256
Query: 97 IVVHTNRREPDALLII-----GLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 151
+VV +++ P L+++ G+P GPT + + K I HG T H PEL+LNNF
Sbjct: 257 LVVQEDQKRPSRLVVVHLNGEGVPPGPTLTYTIRNYAPGKAIPGHGRATNHYPELLLNNF 316
Query: 152 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKK 211
T LG + + LFP PE GR+VVT HNQRD+IFFR HRY+F + G
Sbjct: 317 KTPLGLLAAKSMHILFPSKPELAGRQVVTLHNQRDYIFFRRHRYVFREARPTEKNVVGAD 376
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSR 267
K+ + K + LQE GPR TLKL + G G E +W K +M+ R
Sbjct: 377 GKEMEGVKG----IRAGLQEIGPRMTLKLRRVDKG-VGRAGSEGPDAVKWEWKAKMEKKR 431
Query: 268 RRFFL 272
RF L
Sbjct: 432 TRFNL 436
>gi|213624553|gb|AAI71258.1| LOC549383 protein [Xenopus (Silurana) tropicalis]
gi|213626175|gb|AAI71260.1| LOC549383 protein [Xenopus (Silurana) tropicalis]
Length = 291
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S+R F E+ + PN+ RG +++ +++ + D T +++VH +
Sbjct: 83 PKIMVTTSRDPSSRLKIFAKEMRLIFPNAQRMNRGKHEVGALVQACRANDVTDLLIVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F L +V+R DI + G + P L+ +NF++RLG RV +
Sbjct: 143 RGMPDGLIVCHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAHPHLIFHNFSSRLGQRVADI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF NQ D+I FRHH Y +T
Sbjct: 203 MKYLFP-VPKEESKRVITFANQDDYISFRHHTY----------------------RRTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ + L E GPRF +KL ++ GT + +G E EW P +T+++R +L
Sbjct: 240 RNI--ELTEVGPRFVMKLYMIKLGTLENEGTSEVEWRWHPYTNTAKKRKYL 288
>gi|169642518|gb|AAI60494.1| LOC549383 protein [Xenopus (Silurana) tropicalis]
Length = 291
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 139/270 (51%), Gaps = 37/270 (13%)
Query: 4 RTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISE 63
+ +E E E V DDE AD PKI++TT R S+R F E
Sbjct: 55 KQLEFDDEGGEGVSSHMDDEYKWAGVAD-----------PKIMVTTSRDPSSRLKIFAKE 103
Query: 64 LLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK 123
+ + PN+ RG +++ +++ + D T +++VH +R PD L++ LP GPTA+F
Sbjct: 104 MRLIFPNAQRMNRGKHEVGALVQACRANDVTDLLIVHEHRGMPDGLIVCHLPFGPTAYFT 163
Query: 124 LSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
L +V+R DI + G + P L+ +NF++RLG RV +++ LFP P+ +RV+TF N
Sbjct: 164 LCNVVMRHDIPDLGTMSEAHPHLIFHNFSSRLGQRVADIMKYLFP-VPKEESKRVITFAN 222
Query: 184 QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
Q D+I FRHH Y +T + + L E GPRF +KL +
Sbjct: 223 QDDYISFRHHTY----------------------RRTDHRNI--ELTEVGPRFEMKLYMI 258
Query: 244 QHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ GT + +G E EW P +T+++R +L
Sbjct: 259 KLGTLENEGTSEVEWRWHPYTNTAKKRKYL 288
>gi|62860108|ref|NP_001016629.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Xenopus
(Silurana) tropicalis]
gi|89269525|emb|CAJ82846.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
[Xenopus (Silurana) tropicalis]
Length = 291
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 139/270 (51%), Gaps = 37/270 (13%)
Query: 4 RTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISE 63
+ +E E E V DDE AD PKI++TT R S+R F E
Sbjct: 55 KQLEFDDEGGEGVSSHMDDEYKWAGVAD-----------PKIMVTTSRDPSSRLKIFAKE 103
Query: 64 LLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK 123
+ + PN+ RG +++ +++ + D T +++VH +R PD L++ LP GPTA+F
Sbjct: 104 MRLIFPNAQRMNRGKHEVGALVQACRANDVTDLLIVHEHRGMPDGLIVCHLPFGPTAYFT 163
Query: 124 LSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
L +V+R DI + G + P L+ +NF++RLG RV +++ LFP P+ +RV+TF N
Sbjct: 164 LCNVVMRHDIPDLGTMSEAHPHLIFHNFSSRLGQRVADIMKYLFP-VPKEESKRVITFAN 222
Query: 184 QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
Q D+I FRHH Y +T + + L E GPRF +KL +
Sbjct: 223 QDDYISFRHHTY----------------------RRTDHRNI--ELTEVGPRFEMKLYMI 258
Query: 244 QHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ GT + +G E EW P +T+++R +L
Sbjct: 259 KLGTLENEGTSEVEWRWHPYTNTAKKRKYL 288
>gi|290983235|ref|XP_002674334.1| predicted protein [Naegleria gruberi]
gi|284087924|gb|EFC41590.1| predicted protein [Naegleria gruberi]
Length = 317
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 135/252 (53%), Gaps = 30/252 (11%)
Query: 26 AGNDADEFSSILKQGCA------PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
+G++ ++ S+++ A PKIL+TT S+R F+ EL + PN RG
Sbjct: 66 SGDNDNQISNLIDNEYANAGQEDPKILLTTALDPSDRLKRFVKELRFLFPNCQRMNRGRQ 125
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HG 137
++I++ A + FT ++++H N+ EPD +++ LP GPTA+F + +V+R ++ N
Sbjct: 126 QTQEIVQAATQNGFTDLVMIHENKGEPDTMIVTHLPHGPTAYFTMFNVVMRHEVMNLREE 185
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
P L+ +NF T+LG RV +++ LFP P+ R+VTF N DFI FRHH Y+
Sbjct: 186 KMPQQFPHLIFHNFKTKLGERVATILKYLFP-VPKQESNRIVTFANDNDFISFRHHVYM- 243
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
+ S G+ +L+E GPRF L+L ++ GT K E EW
Sbjct: 244 --RNSPGTTPP------------------IQLKEVGPRFELQLFQIRLGTVADKDAELEW 283
Query: 258 VHKPEMDTSRRR 269
V +P M+T+ +R
Sbjct: 284 VLRPYMNTASKR 295
>gi|221220154|gb|ACM08738.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Salmo salar]
Length = 291
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F+ + + P + RG +++K +++ K + T +++VH
Sbjct: 83 PKVMVTTSRDPSSRLKMFVKGVKLIFPGAQRMNRGGHEIKALVQACKANNVTDLVIVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFSSRLGQRVSNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ DFI FRHH Y +KT
Sbjct: 203 LKYLFP-VPKEDSRRVITFANQEDFISFRHHTY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + + EW H T+++R FL
Sbjct: 240 RNV--ELSEVGPRFEIKLYMIKLGTLENEATADVEWRHHSYTHTAKKRKFL 288
>gi|321472015|gb|EFX82986.1| hypothetical protein DAPPUDRAFT_100907 [Daphnia pulex]
Length = 278
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 128/232 (55%), Gaps = 26/232 (11%)
Query: 43 PKILITTCRFN-SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT 101
PKI+ITT + S+R F+ EL V PNS +G Y++K++++ + T IVVH
Sbjct: 63 PKIMITTWSHDPSSRLKMFVKELKLVFPNSQRLNQGNYEMKQLLDACRANSVTDFIVVHE 122
Query: 102 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGR 161
+R +P+A++I LP GPTA+F +S +V+R DI + G + LV +N T LG RV
Sbjct: 123 HRGQPNAIIISHLPYGPTAYFNVSDVVMRHDIPDIGPMSEQYTHLVFHNMKTPLGQRVMN 182
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFP P+ +RV+TF N DFI +RHH Y KG G
Sbjct: 183 ILKYLFP-VPKEDSKRVITFANHDDFISYRHHTY------KKGEAGKG------------ 223
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
L+E GPRF L+L L+ GT D + EW ++P M+T+++R FL
Sbjct: 224 -----IELKEVGPRFQLRLYDLKLGTIDQADAADTEWAYRPYMNTTKKRRFL 270
>gi|189190278|ref|XP_001931478.1| ribosome production factor 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973084|gb|EDU40583.1| ribosome production factor 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 441
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 122/238 (51%), Gaps = 16/238 (6%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
P+ILITT ++ A I L + PNS Y +R Y +K+I +A + +T++
Sbjct: 212 PQILITTSINSTLHKEADI--LTGLFPNSTYIRRTKHVHAHKYSVKEIASFASARGYTAL 269
Query: 97 IVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++ E PD L I+ LP GP HF +S + K + H TGH PEL+LN F T
Sbjct: 270 VILMQAEHEKKPDGLDIVTLPHGPHFHFSVSNWIEGKKLPRHATDTGHYPELILNQFKTP 329
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKD 214
LG L ++LFP PE GR+V+T HNQRD+IF R HRY+F K G K
Sbjct: 330 LGILTAHLFKNLFPAKPELEGRQVLTLHNQRDYIFVRRHRYVFRDKRGSEKSVVGNDGKP 389
Query: 215 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ V +QE GPR TLKL + G G E++W K M+ R RF +
Sbjct: 390 I----PGVEDVRVGMQEIGPRMTLKLRRIDRGIQFKSGQEWQW--KGRMEKKRTRFNM 441
>gi|330940968|ref|XP_003306012.1| hypothetical protein PTT_19019 [Pyrenophora teres f. teres 0-1]
gi|311316713|gb|EFQ85900.1| hypothetical protein PTT_19019 [Pyrenophora teres f. teres 0-1]
Length = 437
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 122/238 (51%), Gaps = 16/238 (6%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
P+ILITT ++ A I L + PNS Y +R Y +K+I +A + +T++
Sbjct: 208 PQILITTSINSTLHKEADI--LTGLFPNSTYIRRTQHVHAHKYSVKEIASFASARGYTAL 265
Query: 97 IVVHTNRRE--PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATR 154
+++ E PD L I+ LP GP HF +S + K + H TGH PEL+LN F T
Sbjct: 266 VILMQAEHEKKPDGLDIVTLPHGPHFHFSVSNWIEGKKLPRHATDTGHYPELILNQFKTP 325
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKD 214
LG L ++LFP PE GR+V+T HNQRD+IF R HRY+F K G K
Sbjct: 326 LGILTAHLFKNLFPAKPELEGRQVLTLHNQRDYIFVRRHRYVFRDKRGSEKSVLGNDGKP 385
Query: 215 AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ V +QE GPR TLKL + G G E++W K M+ R RF +
Sbjct: 386 L----PGVEDVRVGMQEIGPRMTLKLRRIDRGIQFKSGQEWQW--KGRMEKKRTRFNM 437
>gi|242247367|ref|NP_001156260.1| U3 small nucleolar ribonucleoprotein protein imp4-like
[Acyrthosiphon pisum]
gi|239789438|dbj|BAH71344.1| ACYPI008198 [Acyrthosiphon pisum]
Length = 313
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT S R F+ EL + PN+ RG Y++K++I+ + + T IVVH +
Sbjct: 94 PKIMITTSHDPSTRLKKFVKELRLIFPNAQRMNRGNYEIKQLIQACRANEVTDFIVVHEH 153
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ +P GPTA+F L+ +V+R D+ + G + P L+ +NF T+LG R +
Sbjct: 154 RGVPDTLIVCHMPYGPTAYFNLTDVVMRHDVPDIGTMSEQFPHLIFHNFETQLGKRTMNI 213
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ L+P P+ +RV++F N D+I FRHH Y K D N
Sbjct: 214 LKYLYP-VPKEDSKRVISFANHDDYISFRHHTY-------KTVDGNK------------- 252
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ E GPRF LKL ++ GT ++ + EW+ +P M+T+ +R FL
Sbjct: 253 ----IEMSEVGPRFQLKLYQIKLGTLESADTADTEWMLRPFMNTASKRRFL 299
>gi|328870505|gb|EGG18879.1| hypothetical protein DFA_02618 [Dictyostelium fasciculatum]
Length = 286
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 123/230 (53%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+ +TT R S R F EL + PNS RG + +K++++ + D T +++ H +
Sbjct: 82 PKVFVTTSRDPSARLTQFAKELKMLFPNSQKMNRGAHVIKELVDACRANDVTDLVIAHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
EP+ L++ LP GPTA+F++ ++ DI++ + P L+ NNF T LG R +
Sbjct: 142 SGEPNGLVVCHLPYGPTAYFEIVNCIMIHDIQDAPPASLAYPHLIFNNFTTPLGSRTENI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P +RV+TF N D+I FRHH Y EK
Sbjct: 202 LKYLFP-VPAQDSKRVLTFSNNNDYISFRHHIY----------------------EKDGH 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ V+ L+E GPRF LKL +Q GT D + EWV++P M++++ R FL
Sbjct: 239 KNVL--LKEVGPRFELKLYKIQLGTIDQPEADVEWVYRPYMNSTKNRTFL 286
>gi|16768354|gb|AAL28396.1| GM02712p [Drosophila melanogaster]
Length = 298
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 127/235 (54%), Gaps = 28/235 (11%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL +IPN+ RG Y L ++ + + T ++
Sbjct: 77 GCEDPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLI 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R D+L++ LP GPTA F +S +V+R DI + G+ + P L+ NNF T +G R
Sbjct: 137 VHEHRGILDSLVVCHLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV++F N D I FRHH+Y + KE
Sbjct: 197 TVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHHQYKYVNKE----------------- 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF+LKL ++ GT + K + EW+++P M+TS++R
Sbjct: 239 --------LELTEVGPRFSLKLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIF 285
>gi|390343451|ref|XP_003725879.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Strongylocentrotus purpuratus]
Length = 290
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 26/228 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F EL ++PN+ RG Y++ ++++ + D T +I+VH +
Sbjct: 82 PKIMLTTSRDPSSKLKQFAKELKLILPNAQRLNRGNYEIGQLVQACRANDVTDLIMVHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PDAL I LP GPTA F L VLR DI G + P L+ NNF ++LG RV +
Sbjct: 142 RGVPDALQICHLPYGPTAFFTLFNPVLRHDIPKIGTMSEAYPHLIFNNFKSKLGERVMSI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D I FRHH Y K D K+
Sbjct: 202 LKYLFP-VPKEDSKRVITFANDDDSISFRHHTY---------------KKVDHKN----- 240
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRR 269
L E GPRF +KL ++ GT D + E EWV +P M+T+++R
Sbjct: 241 ----VDLIEVGPRFEMKLYEIRLGTIDQSNTAEVEWVSRPYMNTAKKR 284
>gi|336257693|ref|XP_003343670.1| hypothetical protein SMAC_08841 [Sordaria macrospora k-hell]
gi|380091903|emb|CCC10632.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 427
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 22/245 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PK+L+TT + A ++ ++ PNS Y +R Y +++I ++AK + +T +
Sbjct: 190 PKVLVTTHLNGTIHKEA--EDIAAIFPNSTYIRRSAHAYGHKYSVREIAKFAKNRGYTIL 247
Query: 97 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 151
++V + ++P +L II L GP+ + + + K + HGNPT H PEL+LN F
Sbjct: 248 MIVGEDLKKPSSLTIIHLNGEDVAPGPSLTYTIRNYLPGKALLGHGNPTNHYPELLLNGF 307
Query: 152 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKK 211
T LG + + ++FP PE +GR+VVT HNQRD+IFFR HRY+F +E++ ++ N
Sbjct: 308 KTPLGILAAKSMHTMFPPKPELQGRQVVTLHNQRDYIFFRRHRYVF--REARATEKNVVT 365
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSR 267
A+ + E Q + LQE GPRFTLKL + G G E E W K +M+ R
Sbjct: 366 AEGKEME--GMQGIRAGLQEIGPRFTLKLRRVDKG-IGRAGSEGEDALKWEWKAKMEKVR 422
Query: 268 RRFFL 272
RF L
Sbjct: 423 TRFNL 427
>gi|229367592|gb|ACQ58776.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Anoplopoma
fimbria]
Length = 291
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 125/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F E+ + P + RG +++ ++ K + T +++VH
Sbjct: 83 PKVMVTTSRDPSSRLKMFSKEVKLMFPGAQRMNRGNHEINSLVRACKANNVTDLVIVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+LNNF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLILNNFSSRLGSRVSNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP E G RV+TF NQ DFI FRHH Y +KT
Sbjct: 203 LKYLFPVPKEDSG-RVITFANQEDFISFRHHTY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ + L E GPRF +KL ++ GT + + + EW H T+++R FL
Sbjct: 240 RNI--ELTEVGPRFEMKLYMIKLGTLENESTADVEWRHHAYTHTAKKRRFL 288
>gi|384497215|gb|EIE87706.1| hypothetical protein RO3G_12417 [Rhizopus delemar RA 99-880]
Length = 285
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 121/230 (52%), Gaps = 26/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKILITT R S+R F E+ V PNS RG + +K+I+E + + T +I++H +
Sbjct: 82 PKILITTSRDPSSRLQQFSKEMRLVFPNSQRINRGGHVMKEIVEACRANEVTDLIILHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD +++ P GPTA+F L +VLR DIK+ G + P L+ NNF ++LG R+ +
Sbjct: 142 RGQPDGMVVCHFPYGPTAYFSLHNVVLRHDIKDQGTVSEAFPHLIFNNFNSKLGGRITNI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I FRHH Y+ KT
Sbjct: 202 LKYLFP-VPKDDSKRVMTFANDNDYISFRHHVYV----------------------KTGN 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
Q L E GPRF ++ ++ GT D + EW T+ RR L
Sbjct: 239 Q---VELAEVGPRFEMRPYEIRLGTVDLTDADVEWQLAAYTRTAARRVAL 285
>gi|428183497|gb|EKX52355.1| hypothetical protein GUITHDRAFT_159282 [Guillardia theta CCMP2712]
Length = 288
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 137/267 (51%), Gaps = 36/267 (13%)
Query: 6 IENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELL 65
IE E E P DDE + D P+++++T R S+R F E+
Sbjct: 58 IELDDERSEIPWDPMDDEYGRAGEFD-----------PRVMVSTSRDPSSRLVQFAKEVC 106
Query: 66 SVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLS 125
+ PNS RG Y K+I++ +K + T +++VH +R EPD L+I +P GPTA F L
Sbjct: 107 LLFPNSQRINRGNYTTKEIVDACRKNEVTDLVLVHEHRGEPDGLVITHMPHGPTAFFGLM 166
Query: 126 KLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQR 185
+V R D+K + P L+ +NF T+LG R +++ LFP P+ +RVVTF N+
Sbjct: 167 NVVTRHDVKIKETISEAYPHLIFDNFTTKLGLRTQNILKHLFP-VPKDENKRVVTFANRN 225
Query: 186 DFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 245
DFI FRHH Y EKTS ++V L+E GPRF ++L ++
Sbjct: 226 DFISFRHHMY----------------------EKTSHKEV--ELKELGPRFEMRLFQIRL 261
Query: 246 GTFDTKGGEFEWVHKPEMDTSRRRFFL 272
GT + + E+V++P + S+ + L
Sbjct: 262 GTLEQTEAQNEYVYRPYLSNSKTKNLL 288
>gi|357456827|ref|XP_003598694.1| U3 small nucleolar ribonucleoprotein IMP4 [Medicago truncatula]
gi|355487742|gb|AES68945.1| U3 small nucleolar ribonucleoprotein IMP4 [Medicago truncatula]
gi|388501230|gb|AFK38681.1| unknown [Medicago truncatula]
Length = 291
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 128/233 (54%), Gaps = 27/233 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKIL+TT R S F+ EL V PN+ RG + +II+ + D+T +I+VH +
Sbjct: 83 PKILLTTSRDPSAPLKQFVKELSIVFPNAERMNRGGQVISEIIDSCRSHDYTDVILVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 159
R PD L++ LP GPTA+F L +V R +I++ G P ++L+NF T+LG R
Sbjct: 143 RGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIRDRKAVGTMPEAYPHIILDNFETKLGERT 202
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ +R+VTF N+ D+I FRHH Y EK
Sbjct: 203 ANILKHLFP-VPKPDTKRIVTFANKSDYISFRHHIY----------------------EK 239
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ K + L+E GPRF L+L ++ GT D + EWV +P M+T+R+R FL
Sbjct: 240 QAGPKSV-ELKEIGPRFELRLYQIKLGTVDQAEAQTEWVIRPYMNTTRKRNFL 291
>gi|224014550|ref|XP_002296937.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968317|gb|EED86665.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 299
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 124/231 (53%), Gaps = 24/231 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++ +TT R S+R F E+ +IPNS RG++ + ++++ K DF+ ++VV
Sbjct: 92 PRVCVTTSRAPSSRLKQFAKEMKLLIPNSTRINRGSHRVDELVDVCKTSDFSDLVVVQET 151
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 161
R EPD L++ LP GPTA+F L+ VLR D++ P P ++LN F + LG RVG
Sbjct: 152 RGEPDGLIVCHLPLGPTAYFTLNGAVLRHDLEGGAAPMSEAYPHIILNQFNSELGKRVGN 211
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFP P+ RRVVTF N D I FRHH Y KE D
Sbjct: 212 ILKCLFP-IPKLDTRRVVTFSNNDDHISFRHHVY---NKEGNKEDR-------------- 253
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF ++L ++ GT + K E E+V +P ++T+++ L
Sbjct: 254 -----VTLYEVGPRFEMRLYQIKLGTLEMKDAENEYVLRPYLNTAKKNKVL 299
>gi|348543177|ref|XP_003459060.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Oreochromis niloticus]
Length = 308
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 124/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F E+ + P + RG +++ ++ K T +++VH
Sbjct: 100 PKVMVTTSRDPSSRLKMFAKEVKLMFPGAQRMNRGNHEIPALVRACKANSVTDLVIVHET 159
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF +RLG RV +
Sbjct: 160 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFTSRLGKRVSNI 219
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ DFI FRHH Y +KT
Sbjct: 220 LKYLFP-VPKEDSRRVITFANQEDFISFRHHTY----------------------KKTDH 256
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ + L E GPRF +KL ++ GT + +G + EW H T+++R FL
Sbjct: 257 KNI--ELTEVGPRFEMKLYMIKLGTLENEGTADVEWRHHAYTHTAKKRRFL 305
>gi|384485724|gb|EIE77904.1| hypothetical protein RO3G_02608 [Rhizopus delemar RA 99-880]
Length = 285
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 121/230 (52%), Gaps = 26/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKILITT R S+R F E+ V PNS RG + +K+I+E + + T +I++H +
Sbjct: 82 PKILITTSRDPSSRLQQFSKEMRLVFPNSQRINRGGHVMKEIVEACRANEVTDLIILHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD +++ P GPTA+F L +VLR DIK+ G + P L+ NNF ++LG R+ +
Sbjct: 142 RGQPDGMVVCHFPYGPTAYFSLHNVVLRHDIKDQGTVSEAFPHLIFNNFNSKLGGRITNI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I FRHH Y+ KT
Sbjct: 202 LKYLFP-VPKDDSKRVMTFANDNDYISFRHHVYV----------------------KTGN 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
Q L E GPRF ++ ++ GT D + EW T+ RR L
Sbjct: 239 Q---VELAEVGPRFEMRPYEIRLGTVDLTDADVEWQLAAYTRTAARRVAL 285
>gi|194742395|ref|XP_001953688.1| GF17886 [Drosophila ananassae]
gi|190626725|gb|EDV42249.1| GF17886 [Drosophila ananassae]
Length = 298
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 125/231 (54%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT S+R F+ EL + PN+ RG Y L ++ + + T ++VH +
Sbjct: 81 PKIMLTTSHNPSSRLKLFMKELRLIFPNAQQMNRGNYQLTTLMHACRANNVTDFLIVHEH 140
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD+L++ LP GPTA F +S +++R DI + G+ + P L+ NNF T +G R ++
Sbjct: 141 RGIPDSLVVCHLPYGPTAFFNISDVIMRHDIPDIGHMSEQKPHLIFNNFKTPIGLRTVKI 200
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV++F N D I FRHH+Y ++ KE
Sbjct: 201 LKHLFP-VPKENSQRVMSFLNHNDSIIFRHHQYKYKNKE--------------------- 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT + K + EW+++P M+TS+++
Sbjct: 239 ----LELSEVGPRFVLKLYQIKLGTLENIKAADTEWINRPYMNTSQKKLIF 285
>gi|308459351|ref|XP_003091997.1| hypothetical protein CRE_02673 [Caenorhabditis remanei]
gi|308254489|gb|EFO98441.1| hypothetical protein CRE_02673 [Caenorhabditis remanei]
Length = 293
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F E+ + PN+ RG YD+K++++ K +D T +I+
Sbjct: 78 PKIVITTSRDPSSRLKMFAKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIIFTET 137
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD +L+ LP GPTA F ++ +V+R DI N G + P L+ +N +RLG R +
Sbjct: 138 RGNPDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSRLGQRFTTI 197
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N DF+ FRHH + KE++G
Sbjct: 198 LKHLFP-VPKPESKRVITFSNTDDFVSFRHHTF----KETEGE----------------- 235
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
+ E GPRF LK ++ GT + E EWV + +T+R+R FL
Sbjct: 236 ----IEMTEAGPRFELKPYQIKLGTLENLAAAEDEWVLRSYTNTARKRTFL 282
>gi|259089074|ref|NP_001158575.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Oncorhynchus
mykiss]
gi|225704992|gb|ACO08342.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Oncorhynchus
mykiss]
Length = 291
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 126/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F+ E+ + P + RG +++ +++ K + T +++VH
Sbjct: 83 PKVVVTTSRDPSSRLKMFVKEVKLIFPGAQCMNRGGHEINALVQACKANNVTDLVIVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + + P L+ +NF++RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIETMSEAYPHLIFHNFSSRLGQRVSNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ DFI FRHH Y +KT
Sbjct: 203 LKYLFP-VPKEDSRRVITFANQEDFISFRHHTY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + + EW H T+++R FL
Sbjct: 240 KNV--ELSEVGPRFEMKLYMIKLGTLENEATADVEWRHHSYTHTAKKRKFL 288
>gi|164656901|ref|XP_001729577.1| hypothetical protein MGL_3121 [Malassezia globosa CBS 7966]
gi|159103470|gb|EDP42363.1| hypothetical protein MGL_3121 [Malassezia globosa CBS 7966]
Length = 294
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 28/229 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+ILITT R S+R F EL V PNS RGTY + ++ A+ T +IVVH +
Sbjct: 83 PRILITTARSPSSRLSQFAKELRLVFPNSTRMNRGTYTMPELAAAARSNGITDMIVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT F L + LR ++ +HGN T P L+ + F RLG RV
Sbjct: 143 RGVPDAMVVSHFPHGPTVMFTLHNVTLRHEVASHGNSTVSEQFPHLIFDGFGGRLGERVK 202
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
++ LFP P+ RRV+TF N+ DFI FRHH ++ ++
Sbjct: 203 SALRFLFP-VPKDDARRVMTFANRNDFISFRHHVFVATHRD------------------- 242
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L E GPRF L+ ++ GT + + EWV +P M+T+R+R
Sbjct: 243 ------VHLAEVGPRFDLRPYEIRLGTLEQSEADVEWVLRPYMNTTRKR 285
>gi|300121337|emb|CBK21717.2| unnamed protein product [Blastocystis hominis]
Length = 290
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 124/230 (53%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+ +TT R S+R FI E+ +IPNS RG L ++++ + +FT I++V+ +
Sbjct: 83 PKVCVTTSRDPSSRLKMFIKEIKLIIPNSQRINRGASKLDELVKACRANNFTDIVIVNEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EP +L++ LP GPTA+F ++ V+R DI+N G + P L+ +N ++LG RV +
Sbjct: 143 RGEPTSLIVSHLPYGPTAYFSITNTVMRHDIENVGTMSEAYPHLIFSNLTSKLGERVTNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P +R++TF NQ DFI FRHH Y+ E ++
Sbjct: 203 LKHLFP-VPRPDSKRILTFANQNDFISFRHHTYLKEDHKTVA------------------ 243
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF L+ ++ GT D + E EW+ +TSR+ L
Sbjct: 244 ------LTEVGPRFELRPYQIRLGTVDQEEAENEWILHQYTNTSRKHKLL 287
>gi|50540508|ref|NP_001002719.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Danio rerio]
gi|49899179|gb|AAH75765.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Danio
rerio]
Length = 291
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 125/231 (54%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S+R F E+ + P + RG +++K ++ K + T +++VH
Sbjct: 83 PKIMVTTSRDPSSRLKMFAKEMKLMFPGAQRMNRGNHEVKTLVHACKSNNVTDLVIVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F + +V+R D+ + G + P L+ +NF +RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTMYNVVMRHDVPDIGTMSEAYPHLIFHNFTSRLGRRVSNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF N D+I FRHH Y +KT
Sbjct: 203 LKYLFP-VPKEDSRRVITFANTDDYISFRHHTY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + + EW H P T+++R FL
Sbjct: 240 KNV--ELTEVGPRFEMKLYMIKLGTLENESTADVEWRHHPYTRTAKKRKFL 288
>gi|340376217|ref|XP_003386630.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Amphimedon queenslandica]
Length = 292
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 128/253 (50%), Gaps = 27/253 (10%)
Query: 21 DDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
DDE G E G P ++ITT S+ F+ EL VIPNS RG +
Sbjct: 60 DDEERLGLTTHEDDEYAWAGVEDPNVVITTSHNPSSSLKQFVKELRLVIPNSQRINRGQF 119
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 139
+ K++E T +I+VH +R PD+L++ LP GPTA F + V+R DI N G
Sbjct: 120 VIGKLVEACNANGATDLIIVHEHRGVPDSLIVCHLPYGPTATFTIFNTVMRHDIPNIGTM 179
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFET 199
+ P L+ +NF T+LG RV +++ LFP P+ +RV+TF N D+I FRHH Y +
Sbjct: 180 SEAYPHLIFHNFKTKLGERVTNILKYLFP-VPKEDSKRVITFANSEDYISFRHHVYKRDG 238
Query: 200 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 259
KE +L+E GPRF LKL + GT D K + EW
Sbjct: 239 KE-------------------------IQLKEVGPRFELKLFKISLGTIDQKDVDVEWKL 273
Query: 260 KPEMDTSRRRFFL 272
+P ++T++++ L
Sbjct: 274 RPYLNTAKKKLAL 286
>gi|331234240|ref|XP_003329780.1| hypothetical protein PGTG_11530 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308770|gb|EFP85361.1| hypothetical protein PGTG_11530 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 511
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 121/216 (56%), Gaps = 23/216 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHY-----YKRGTYDLKKIIEYAKKKDFTSII 97
P+ LITT S AFI EL + S K ++L ++ +A ++ + S++
Sbjct: 157 PRTLITTSPRPSEFTLAFIHELGGLFGGSRNCDIIPRKTKRFELTRVCRWACERGYGSMV 216
Query: 98 VVHT-----NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 152
V+ NR P + I LP GPTA F+++ +V K I H PT H PELVL+NF+
Sbjct: 217 VIGEAHGGRNRSGPTHMTISRLPYGPTASFRMTSIVPSKAIPGHAKPTSHFPELVLSNFS 276
Query: 153 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKA 212
T LG +G L+QS+FP PE GR+VV+ NQRDF+FFR +RY+F +E K
Sbjct: 277 TPLGLSIGTLLQSVFPPLPELEGRQVVSMQNQRDFVFFRRYRYVFAERE---------KV 327
Query: 213 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K ++T + TRLQE GPRFTLK+ L+ GT
Sbjct: 328 FLNKGDET----IRTRLQEIGPRFTLKVRWLKRGTL 359
>gi|367049750|ref|XP_003655254.1| hypothetical protein THITE_2118737 [Thielavia terrestris NRRL 8126]
gi|347002518|gb|AEO68918.1| hypothetical protein THITE_2118737 [Thielavia terrestris NRRL 8126]
Length = 429
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 132/245 (53%), Gaps = 22/245 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT + A E+ +++PN+ Y +R Y +++I ++AK + +T++
Sbjct: 192 PKILVTTGINGTIHKEA--QEIAALLPNATYIRRSAHRYAHKYSVREIAKFAKNRGYTAL 249
Query: 97 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 151
+VVH + + P L + L P GPT + + + K I HGN T H PEL+LN F
Sbjct: 250 LVVHEDLKRPSQLSVCHLNSGDAPPGPTLTYTIRNYLPGKAIPGHGNATNHYPELLLNGF 309
Query: 152 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKK 211
T LG + + LFP PE GR+VVT HNQRD+IFFR HRY+F +E++ ++ N
Sbjct: 310 KTPLGLLAAKSMHMLFPPQPELAGRQVVTLHNQRDYIFFRRHRYVF--REARPTEKNVVG 367
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSR 267
A + E + + LQE GPR TLKL + G G E +W K +M+ R
Sbjct: 368 ADGREMEGV--KGIRAGLQEIGPRMTLKLRRVDKG-IGRAGSEGDDALKWEWKAKMEKKR 424
Query: 268 RRFFL 272
RF L
Sbjct: 425 TRFNL 429
>gi|363814284|ref|NP_001242782.1| uncharacterized protein LOC100803810 [Glycine max]
gi|255639830|gb|ACU20208.1| unknown [Glycine max]
Length = 293
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 125/233 (53%), Gaps = 27/233 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKIL+TT R S F+ EL PN+ RG + +IIE + D+T +++VH +
Sbjct: 83 PKILLTTSRDPSAPLQQFVKELSFEFPNAQRMNRGGQVISEIIESCRAHDYTDVVLVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 159
R PD L++ LP GPTA+F L +V R +IK G P L+L+NF+T+LG R
Sbjct: 143 RGVPDGLIVCHLPFGPTAYFGLLNVVTRHEIKGKKAIGTMPEAYPHLILDNFSTKLGDRT 202
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ +R+VTF NQ D+I FRHH Y EK
Sbjct: 203 ANILKHLFP-VPKPDTKRIVTFSNQSDYISFRHHIY----------------------EK 239
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
K I L+E GPRF L+L ++ GT D + EW +P M+T+++R FL
Sbjct: 240 HGGPKSI-ELKEIGPRFELRLYQIKLGTVDQAEAQIEWAIRPYMNTTKKRKFL 291
>gi|440298107|gb|ELP90748.1| brix domain containing protein C4F8.04, putative [Entamoeba
invadens IP1]
Length = 328
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 135/258 (52%), Gaps = 18/258 (6%)
Query: 3 PRTIENTREPDE-TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TIE R DE TV +D E + DEF++ QG +PKI++TT + F
Sbjct: 67 PVTIEQKRIRDESTVDFKEDKEAVDDINEDEFTAYY-QGKSPKIIVTTTIKPNKVTNKFA 125
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+ V N+ Y+KRG +K I++YA++ +T I++ + N + L +I LP GP+ H
Sbjct: 126 IMMSHVFYNAKYFKRGYNTVKVIMKYAQRYGYTDIVICNDNHKTCTDLYVIHLPIGPSFH 185
Query: 122 FKLSKLVLRKDIKNHGN-PTGHIP-ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
FK+ ++ + +++H + +P E + F TR G V R SLF Q P F GRRVV
Sbjct: 186 FKVFNIINPQQLQDHVRIASWKLPCECLTTGFETRTGIMVARQFNSLFSQKPMFTGRRVV 245
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
T H QRD+IFFRHH Y FE E + G V + E GPRF LK
Sbjct: 246 TLHTQRDYIFFRHHIYQFEEAEDQFDKKKG--------------PVKCTIDELGPRFVLK 291
Query: 240 LVSLQHGTFDTKGGEFEW 257
L ++Q GT +T E+ +
Sbjct: 292 LRTIQKGTMNTINPEYIY 309
>gi|19114697|ref|NP_593785.1| U3 snoRNP-associated protein Imp4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|6226440|sp|O13823.1|IMP4_SCHPO RecName: Full=U3 small nucleolar ribonucleoprotein protein imp4;
Short=U3 snoRNP protein imp4
gi|2388906|emb|CAB11643.1| U3 snoRNP-associated protein Imp4 (predicted) [Schizosaccharomyces
pombe]
Length = 289
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 113/219 (51%), Gaps = 24/219 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+L+TT R S+R F E+ +IPNS+ RG + ++E A+ D T I+++H +
Sbjct: 84 PKVLVTTSREPSSRLAQFAKEVRLLIPNSYRLNRGNIVVGSLVEAARANDITDIVILHEH 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L+I LP GPT F L +VLR DI N G + P L+ N ++LG RV
Sbjct: 144 RGIPDGLVISHLPYGPTLSFSLHNVVLRHDIPNTGTMSEAYPHLIFENLTSKLGKRVKTA 203
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
+ +LFP P+ RVVTF N D+I FRHH Y KT
Sbjct: 204 LSALFPPDPKDTTPRVVTFANTDDYISFRHHIYA----------------------KTGP 241
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+++I L E GPRF +KL + GT D + EW KP
Sbjct: 242 KQII--LSEAGPRFEMKLFEITLGTVDMVDADVEWKLKP 278
>gi|156082537|ref|XP_001608753.1| Brix domain containing protein [Babesia bovis T2Bo]
gi|154796002|gb|EDO05185.1| Brix domain containing protein [Babesia bovis]
Length = 293
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 128/222 (57%), Gaps = 24/222 (10%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT 101
PKI++TT R S+R F E+ +IPNS RG+Y LK ++ + K KD + I++++
Sbjct: 82 TPKIMVTTSRDPSSRLSQFAKEVRLIIPNSERMNRGSYILKDLVTFCKSKDVSDIVLLYE 141
Query: 102 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH--IPELVLNNFATRLGHRV 159
+R EP+A++I LP GPTA+F+LS++VLR D+ PT P L+ +NF+++LG RV
Sbjct: 142 HRGEPNAMIICHLPHGPTAYFQLSQVVLRHDLPEKP-PTMSEAYPHLIFHNFSSQLGERV 200
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+I+ +FP + E RV++F N+RD+I FRHH + S D + K+ +
Sbjct: 201 KNIIRYMFPPANEDET-RVLSFVNKRDYIHFRHHVWT-----SNNRDGDDKEVQ------ 248
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
L E GPRF ++ ++ GT D + E EW +P
Sbjct: 249 ---------LTEVGPRFIMRPFKIELGTVDMRDIETEWALRP 281
>gi|341897969|gb|EGT53904.1| hypothetical protein CAEBREN_02620 [Caenorhabditis brenneri]
Length = 292
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 139/275 (50%), Gaps = 33/275 (12%)
Query: 5 TIENTREPDETVCRPDDDELFAGNDAD----EFSSILKQGCA--PKILITTCRFNSNRGP 58
+EN + D + R D EL G+D E S + A PK++ITT R S+R
Sbjct: 35 ALENNTKIDYNL-RKDAIELAKGSDWGGQQYEVDSEYRWAGAQDPKVVITTSRDPSSRLK 93
Query: 59 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
F E+ + PN+ RG YD+K++++ K +D T +I+ R PD +L+ LP GP
Sbjct: 94 MFAKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIIFTETRGNPDGMLVCHLPFGP 153
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
TA F ++ +V+R DI N G + P L+ +N ++LG R +++ LFP P+ +R+
Sbjct: 154 TAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKHLFP-VPKPDSKRI 212
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
+TF N D++ FRHH Y K D + E L E GPRF L
Sbjct: 213 ITFSNTEDYVSFRHHVY--------------KTENDGEIE----------LTEAGPRFEL 248
Query: 239 KLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
K ++ GT + E EWV + +T+R+R FL
Sbjct: 249 KPYQIKLGTLENLAAAEDEWVLRSYTNTARKRTFL 283
>gi|255087308|ref|XP_002505577.1| predicted protein [Micromonas sp. RCC299]
gi|226520847|gb|ACO66835.1| predicted protein [Micromonas sp. RCC299]
Length = 289
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 124/229 (54%), Gaps = 26/229 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+L+TT R S+R F+ E+ ++P + RG L ++E + DFT ++VVH +
Sbjct: 83 PKVLVTTSRDPSSRLTQFVKEVKLLMPTAQRINRGAQVLPDLVELCRSNDFTDLVVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVLNNFATRLGHRVG 160
R EPD ++I +P GPTA+F +S V+R DIK+ G + P L+L NF T LG R
Sbjct: 143 RGEPDGMVISHMPFGPTAYFGISSTVMRHDIKDEDIGTVSEANPHLILENFTTALGKRTA 202
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LF P+ + +RV+TF N D+I RHH Y + K KS
Sbjct: 203 NILKHLF-APPKGKSKRVITFANNADWISLRHHTY--------------EMPKGPKS--- 244
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
+L E GPRF +KL ++ GT D + + EW +P M +++++
Sbjct: 245 ------VQLTEVGPRFEMKLYQIKLGTIDAEDADVEWALRPFMRSAKKK 287
>gi|430813984|emb|CCJ28728.1| unnamed protein product [Pneumocystis jirovecii]
Length = 272
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKILITT R S + F E+ +IPNS RG Y + I+ + D T +I++H
Sbjct: 66 PKILITTSREPSTKLSQFAKEIKLLIPNSRRINRGNYVINDIVAACRSNDITDLIILHET 125
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L+I P GPT F L ++LR DI N GN + P L++ N ++LG RV +
Sbjct: 126 RGVPDCLIISHFPYGPTVSFTLHNVILRHDIPNIGNVSESYPRLIMLNLTSKLGLRVKNV 185
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
+++LFP SP+ RV+TF NQ D+I RHH Y+ +T
Sbjct: 186 LKALFPPSPKENSHRVITFANQEDYISLRHHVYL----------------------RTDS 223
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+ + L E GPR + L ++ GT D + EW KP
Sbjct: 224 KNI--ELVEVGPRLEMHLYEIKLGTIDMPTADIEWRLKP 260
>gi|268553967|ref|XP_002634971.1| Hypothetical protein CBG13507 [Caenorhabditis briggsae]
Length = 292
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 141/275 (51%), Gaps = 33/275 (12%)
Query: 5 TIENTREPDETVCRPDDDELFAGNDAD----EFSSILKQGCA--PKILITTCRFNSNRGP 58
+EN + D + R D EL G+D E S + A PKI+ITT R S+R
Sbjct: 35 ALENNTKIDYNL-RKDAIELAKGSDWGGQQYEVDSEYRWAGAQDPKIVITTSRDPSSRLK 93
Query: 59 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
F E+ + PN+ RG YD+K++++ K +D T +I++ R PD +++ LP GP
Sbjct: 94 MFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGNPDGMIVCHLPFGP 153
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
TA F ++ +V+R DI N G + P L+ +N ++LG R +++ LFP P+ +R+
Sbjct: 154 TAFFTMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKHLFP-VPKPDSKRI 212
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
+TF N D++ FRHH Y ET D + E L E GPRF L
Sbjct: 213 MTFSNVDDYVSFRHHTYKTET--------------DGEIE----------LNEVGPRFEL 248
Query: 239 KLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
K ++ GT + E EWV + +T+R+R FL
Sbjct: 249 KPYQIKLGTLENLAAAEDEWVLRTYTNTARKRTFL 283
>gi|171686510|ref|XP_001908196.1| hypothetical protein [Podospora anserina S mat+]
gi|170943216|emb|CAP68869.1| unnamed protein product [Podospora anserina S mat+]
Length = 491
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 134/244 (54%), Gaps = 25/244 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG------TYDLKKIIEYAKKKDFTSI 96
PKIL+TT + A E+ ++ PNS Y +R Y +++I ++AK ++
Sbjct: 259 PKILVTTSLNATIHKEA--EEIGAIFPNSTYIRRSGHRWGHKYSVREIAKFAK-----TL 311
Query: 97 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 151
+VVH + + P + I+ L GPT + + + K + HGN T H PEL+LNNF
Sbjct: 312 VVVHEDLKRPHQMSIVHLNSEDAAPGPTLTYSIRNYLPGKSLLGHGNATNHYPELLLNNF 371
Query: 152 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKK 211
T LG + + +LFP PE +GR+VVT HNQRD+IFFR HRY+F +E++ ++ N
Sbjct: 372 KTPLGLLAAKSMNTLFPARPELQGRQVVTLHNQRDYIFFRRHRYVF--REARATEKNVVT 429
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT--FDTKG-GEFEWVHKPEMDTSRR 268
A+ + E Q + LQE GPR TLKL + G ++G G +W K +M+ R
Sbjct: 430 AEGKEME--GMQGIRAGLQEIGPRMTLKLRRVDKGIGRAGSEGEGALKWEWKAKMEKKRT 487
Query: 269 RFFL 272
RF L
Sbjct: 488 RFNL 491
>gi|37805976|dbj|BAC99390.1| putative U3 snoRNP protein IMP4 [Oryza sativa Japonica Group]
gi|215765881|dbj|BAG87578.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 293
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 136/260 (52%), Gaps = 37/260 (14%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
D V R D+ +AG E PKIL+TT R S F+ EL V PNS
Sbjct: 63 DSAVPRSLIDDEYAGAALRE----------PKILLTTSRNPSAPLTQFVKELKVVFPNSQ 112
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG + +I+E + D T +++VH +R +PD L++ LP GPTA+F L +V R D
Sbjct: 113 RMNRGGQVISEIVESCRSHDITDLVLVHEHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHD 172
Query: 133 IKNH---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 189
IK+ G + P L+L+NF T+ G R +++ LFP P+ +R++TF N+ D+I
Sbjct: 173 IKDRKAMGKMSEAYPHLILDNFTTKTGERTANIVKHLFP-VPKPDSKRIITFANRDDYIS 231
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
FRHH Y E G G K+ D L+E GPRF L+L ++ GT D
Sbjct: 232 FRHHVY-----EKHG----GPKSLD--------------LKEVGPRFELRLYQIKRGTVD 268
Query: 250 TKGGEFEWVHKPEMDTSRRR 269
+ E+V +P M+T++++
Sbjct: 269 QAEAQNEFVLRPYMNTAKKQ 288
>gi|403220431|dbj|BAM38564.1| U3 small nucleolar ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 292
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 128/226 (56%), Gaps = 22/226 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+LITT R S+R F E+ +IPNS RG+Y LK ++E+ + KD + +++++
Sbjct: 83 PKVLITTSRSPSSRLLQFAKEMCLIIPNSERLNRGSYVLKDLVEFCRTKDVSDMVLIYET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R +P++++I LP GPTA+F+LS++VLR D+ + + P LV +NF ++LG R
Sbjct: 143 RGKPNSMIISHLPHGPTAYFQLSEVVLRHDLPEKLPTMSQAYPHLVFHNFTSQLGERFKD 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+I+ +FP P RV++F N++D I FRHH + +AK EK
Sbjct: 203 IIRYMFP-PPNTNETRVLSFVNEKDKIIFRHHVWT--------------EAKTGAEEKN- 246
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
L+E GPRF LK ++ GT D + E EWV +P +T +
Sbjct: 247 -----VALKEIGPRFKLKPYKIELGTVDMRDLETEWVLRPYFNTHK 287
>gi|321450338|gb|EFX62396.1| hypothetical protein DAPPUDRAFT_68025 [Daphnia pulex]
Length = 227
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 25/231 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT S+ F+ EL V PNS +G Y++K++ + + T IVVH +
Sbjct: 13 PKIVITTSHDPSSCLKMFVKELKLVFPNSQRLNQGNYEMKQLFDACRANSVTDFIVVHEH 72
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
+P+A++I LP GPTA+F +S +V+R DI + G + P LV +N T LG RV +
Sbjct: 73 LGQPNAIIISHLPYGPTAYFNVSDVVMRHDIPDIGPMSEQYPHLVFHNMKTLLGQRVMNI 132
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP S E +RV+TF N DFI +RHH Y KG G
Sbjct: 133 LKYLFPVSKE-DSKRVITFANHNDFISYRHHTY------KKGEAGKG------------- 172
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEFEWVHKPEMDTSRRRFFL 272
L+E GPRF +L L+ T D + EW ++P M+T+++R FL
Sbjct: 173 ----IELKEVGPRFQSRLYDLKLRTIDQADAADTEWAYRPYMNTTKKRRFL 219
>gi|402077343|gb|EJT72692.1| brix domain-containing protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 422
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 135/264 (51%), Gaps = 23/264 (8%)
Query: 23 ELFAGNDADEFSSILKQGC--APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG--- 77
+L + A +F ++ +G PKIL+TT + A I + S+ PNSHY R
Sbjct: 168 DLTPASIARKFPTLFTEGPHPEPKILVTTSLKATIHREAGI--IASLFPNSHYVPRSGHR 225
Query: 78 ---TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 134
Y L+ I ++ + FT++++V ++++P L I LP+GPT HF ++ + +
Sbjct: 226 YAHKYSLRDICKFGSNRGFTAVVMVREDQKKPTGLTIAHLPEGPTFHFTITNWIEGSKLP 285
Query: 135 NHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHR 194
HGN G PEL+LN F T LG +L++ LFP PE GR V+T HNQRD++F R HR
Sbjct: 286 GHGNSQGFYPELLLNRFTTPLGLLTAQLLRRLFPYQPEIAGREVLTIHNQRDYLFVRRHR 345
Query: 195 YIFETK---ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT--FD 249
Y + + E D GK E V LQE GPRFTLKL + G
Sbjct: 346 YKYRERRQTEKTVVDEEGK-------EIPGFTDVRVGLQEIGPRFTLKLRRVDKGIGRAG 398
Query: 250 TKGGE-FEWVHKPEMDTSRRRFFL 272
+ G + +W K M+ R +F L
Sbjct: 399 SDGDDAVQWEWKARMEKVRTKFNL 422
>gi|219362803|ref|NP_001136548.1| uncharacterized protein LOC100216667 [Zea mays]
gi|194696132|gb|ACF82150.1| unknown [Zea mays]
gi|413934739|gb|AFW69290.1| hypothetical protein ZEAMMB73_385841 [Zea mays]
gi|413934740|gb|AFW69291.1| hypothetical protein ZEAMMB73_385841 [Zea mays]
gi|413934741|gb|AFW69292.1| hypothetical protein ZEAMMB73_385841 [Zea mays]
Length = 293
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 130/230 (56%), Gaps = 27/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKIL+TT R S F+ EL V PNS RG + +I+E + D T +I+VH +
Sbjct: 83 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVEACRSHDITDLILVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 159
R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF+T++G R
Sbjct: 143 RGQPDGLIVSHLPHGPTAYFGLLNVVTRHDIKDRKTMGKMSEAYPHLILDNFSTQIGERT 202
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ +R++TF N+ D+I FRHH Y E G G K+ D
Sbjct: 203 ATILKHLFP-VPKPDSKRIITFANRDDYISFRHHVY-----EKPG----GPKSID----- 247
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L+E GPRF L+L ++ GT + K + E+V +P ++T++++
Sbjct: 248 ---------LKEVGPRFELRLYQIKLGTVEQKEAQSEFVLRPYINTAKKQ 288
>gi|256078860|ref|XP_002575711.1| U3 small nucleolar ribonucleoprotein protein imp4 [Schistosoma
mansoni]
gi|350644510|emb|CCD60745.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Schistosoma mansoni]
Length = 277
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 138/275 (50%), Gaps = 46/275 (16%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+T+E+ R DET+ DD+E+ ++ DEFSSI PKIL+T R F
Sbjct: 44 PQTLESLRTVDETIVPKDDEEVVIEHETDEFSSIFNGEITPKILLTHSDRVCPRTIGFCK 103
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
EL VIPN R LKKII A ++ FT +I+V+ ++++ + L++ LP+GPTA F
Sbjct: 104 ELSMVIPNVQLVARWHLPLKKIIPMAIERQFTCLIIVNEDQKKINTLVVSHLPNGPTATF 163
Query: 123 KLSKLVLRKDIKNHGN----PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
+L+ ++LR+++++ + IP L+ F TRLG R R++ SLFP
Sbjct: 164 RLTNVLLRREMRSAKKVKYIESNVIPHLITTRFMTRLGLRTERILSSLFP---------- 213
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
N + K + + + + E GP+FTL
Sbjct: 214 -----------------------------NESRLPPQPHSKHNTENIT--MNEVGPKFTL 242
Query: 239 KLVSLQHGTFDTKGGEFEWVHK-PEMDTSRRRFFL 272
KL S+Q GTFD++ G +EWV K E+ SRR F L
Sbjct: 243 KLRSIQLGTFDSQYGNYEWVRKRTEIGKSRRTFVL 277
>gi|432875435|ref|XP_004072840.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Oryzias latipes]
Length = 291
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S+R F E+ + P + RG ++L ++ K + T +++VH
Sbjct: 83 PKIMVTTSRDPSSRLKMFAKEVKLMFPGAQRMNRGNHELPTLVRACKANNVTDLVIVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF +RLG RV +
Sbjct: 143 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAYPHLIFHNFTSRLGRRVSSI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ DFI FRHH Y +KT
Sbjct: 203 LKYLFP-VPKDDSRRVITFANQDDFISFRHHTY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + E EW T+++R FL
Sbjct: 240 RNV--ELTEVGPRFEMKLYMIKLGTLENENTAEVEWRQHGFTHTAKKRRFL 288
>gi|222639934|gb|EEE68066.1| hypothetical protein OsJ_26077 [Oryza sativa Japonica Group]
Length = 261
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 130/232 (56%), Gaps = 31/232 (13%)
Query: 43 PKILITTCRFNSNRGP--AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 100
PKIL+TT R + RGP F+ EL V PNS RG + +I+E + D T +++VH
Sbjct: 51 PKILLTTSR--NPRGPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHDITDLVLVH 108
Query: 101 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGH 157
+R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF T+ G
Sbjct: 109 EHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDNFTTKTGE 168
Query: 158 RVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKS 217
R +++ LFP P+ +R++TF N+ D+I FRHH Y E G G K+ D
Sbjct: 169 RTANIVKHLFP-VPKPDSKRIITFANRDDYISFRHHVY-----EKHG----GPKSLD--- 215
Query: 218 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L+E GPRF L+L ++ GT D + E+V +P M+T++++
Sbjct: 216 -----------LKEVGPRFELRLYQIKRGTVDQAEAQNEFVLRPYMNTAKKQ 256
>gi|71031849|ref|XP_765566.1| U3 small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68352523|gb|EAN33283.1| U3 small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 302
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 129/226 (57%), Gaps = 22/226 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKILITT R S+R F EL +IPNS RG+Y LK ++E+ + KD + +++++
Sbjct: 93 PKILITTSRNPSSRLTQFAKELCLIIPNSERLNRGSYILKDLVEFCRSKDVSDMVLIYET 152
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R P++++I LP GPTA+F+LS +VLR D+ + + P L+ +NF + LG R+
Sbjct: 153 RGNPNSMIITHLPHGPTAYFQLSDVVLRHDLTEKLPTMSQAYPHLMFHNFTSPLGERIKD 212
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+I+ +FP P R+++F N++D I FRHH + T++ G A+D K
Sbjct: 213 IIRYMFP-PPNTNETRIMSFINEKDKIIFRHHVW---TEKKIG-------AEDKK----- 256
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
L+E GPRF LK ++ GT D + E EWV +P +T +
Sbjct: 257 -----VALKEIGPRFVLKPFKIELGTVDMRDLETEWVLRPYFNTHK 297
>gi|406696412|gb|EKC99702.1| hypothetical protein A1Q2_06012 [Trichosporon asahii var. asahii
CBS 8904]
Length = 430
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 115/215 (53%), Gaps = 38/215 (17%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVV 99
P+IL+TT + F EL +V P ++KR ++L ++ +A K+ + + IVV
Sbjct: 173 PRILLTTSPGPTKATYQFCDELKNVFPGGEFFKRPKGRGFELGRVARWAAKRGYHACIVV 232
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 159
+ + ++P+A+ +I LP GPTA+FKLS + L +I L+LN F T LG+ V
Sbjct: 233 NEDHKKPNAITLINLPAGPTAYFKLSSVQLSSEIY-----------LILNGFTTLLGNAV 281
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
GR+ LFP P+FRGR+VVT HNQRDF+FFR HRY F +
Sbjct: 282 GRMFGQLFPSLPQFRGRQVVTLHNQRDFLFFRRHRYAFASPTE----------------- 324
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE 254
+LQE GPRFTLKL ++ G K +
Sbjct: 325 -------AKLQEIGPRFTLKLRWMRKGLPGVKAAD 352
>gi|401888364|gb|EJT52322.1| hypothetical protein A1Q1_04533 [Trichosporon asahii var. asahii
CBS 2479]
Length = 430
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 115/215 (53%), Gaps = 38/215 (17%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT---YDLKKIIEYAKKKDFTSIIVV 99
P+IL+TT + F EL +V P ++KR ++L ++ +A K+ + + IVV
Sbjct: 173 PRILLTTSPGPTKATYQFCDELKNVFPGGEFFKRPKGRGFELGRVARWAAKRGYHACIVV 232
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 159
+ + ++P+A+ +I LP GPTA+FKLS + L +I L+LN F T LG+ V
Sbjct: 233 NEDHKKPNAITLINLPAGPTAYFKLSSVQLSSEIY-----------LILNGFTTLLGNAV 281
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
GR+ LFP P+FRGR+VVT HNQRDF+FFR HRY F +
Sbjct: 282 GRMFGQLFPSLPQFRGRQVVTLHNQRDFLFFRRHRYAFASPTE----------------- 324
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE 254
+LQE GPRFTLKL ++ G K +
Sbjct: 325 -------AKLQEIGPRFTLKLRWMRKGLPGVKAAD 352
>gi|345320319|ref|XP_001521028.2| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like,
partial [Ornithorhynchus anatinus]
Length = 262
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 137/274 (50%), Gaps = 41/274 (14%)
Query: 4 RTIENTRE----PDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA 59
R IE+ +E + VC DDE D PKI+ITT R S+R
Sbjct: 22 RAIEDKKERLKKALDGVCSHVDDEYRWAGVED-----------PKIMITTSRDPSSRLKM 70
Query: 60 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
F EL V P + RG +++ +++ K T +++VH +R P L++ LP GPT
Sbjct: 71 FAKELKLVFPGAQRMNRGRHEVGSLVQACKANGVTDLLMVHEHRGTPVGLIVCHLPFGPT 130
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
A+F L +V+R DI + G + +P L+L+ F++RLG RV +++ LFP P+ R++
Sbjct: 131 AYFTLCNVVMRHDIPDLGTMSEALPHLILHGFSSRLGQRVSGILKYLFP-VPKEDSHRII 189
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
TF NQ D+I FRHH Y K D ++ L E GPRF +K
Sbjct: 190 TFANQDDYISFRHHVY---------------KKPDHRT---------VELSEVGPRFEMK 225
Query: 240 LVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
L ++ GT + + E EW P +T+R+R FL
Sbjct: 226 LYMIKLGTLENENTAEVEWRWHPYTNTARKRKFL 259
>gi|320580075|gb|EFW94298.1| Component of the SSU processome [Ogataea parapolymorpha DL-1]
Length = 285
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 125/251 (49%), Gaps = 26/251 (10%)
Query: 22 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 81
DE DE+S+ L PKI+ITT R S+R F E+ + PN+ RG Y L
Sbjct: 59 DESIQETVDDEYSA-LSGLVEPKIIITTSRSPSSRLSQFTKEMKLLFPNAMRLNRGNYIL 117
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 141
+IE KK T +IV+H +R P L I LP GP+ F L +VLR DI N G+ +
Sbjct: 118 SDLIETCKKSGVTDVIVIHEHRGVPTTLTITHLPHGPSVTFTLHNVVLRHDILNVGSQSE 177
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
P LV NF ++LG RV ++++ LFP + + RV++F N DFI R H Y+
Sbjct: 178 AYPHLVFENFTSKLGKRVVQVLKHLFPPGVKPQSPRVISFVNNEDFISVRQHLYV----- 232
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+ KD L E GPRF ++L ++ GT D K + EW+ +
Sbjct: 233 ---------RTKDD-----------VELSEVGPRFEMRLFEVRLGTMDYKDADVEWMLRR 272
Query: 262 EMDTSRRRFFL 272
+ T R+ +L
Sbjct: 273 FVRTGNRKNYL 283
>gi|115474843|ref|NP_001061018.1| Os08g0155000 [Oryza sativa Japonica Group]
gi|37805975|dbj|BAC99389.1| putative U3 snoRNP protein IMP4 [Oryza sativa Japonica Group]
gi|113622987|dbj|BAF22932.1| Os08g0155000 [Oryza sativa Japonica Group]
Length = 249
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 127/230 (55%), Gaps = 27/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKIL+TT R S F+ EL V PNS RG + +I+E + D T +++VH +
Sbjct: 39 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHDITDLVLVHEH 98
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 159
R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF T+ G R
Sbjct: 99 RGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDNFTTKTGERT 158
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ +R++TF N+ D+I FRHH Y E G G K+ D
Sbjct: 159 ANIVKHLFP-VPKPDSKRIITFANRDDYISFRHHVY-----EKHG----GPKSLD----- 203
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L+E GPRF L+L ++ GT D + E+V +P M+T++++
Sbjct: 204 ---------LKEVGPRFELRLYQIKRGTVDQAEAQNEFVLRPYMNTAKKQ 244
>gi|412991168|emb|CCO16013.1| predicted protein [Bathycoccus prasinos]
Length = 291
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 127/248 (51%), Gaps = 30/248 (12%)
Query: 24 LFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK 83
L G + DE+ K KIL+TT R S+R F EL + P S RG+ L
Sbjct: 70 LEKGVNDDEY----KNAPEAKILLTTSRDASSRLLQFCKELKLLFPTSSRINRGSQILPD 125
Query: 84 IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP--TG 141
++E K +FT +++VH +R EPD L++ LP GPTA+F +S V+R D+K+ P +
Sbjct: 126 LVELGKTSEFTDVVIVHEHRGEPDGLVVSHLPFGPTAYFGISDAVMRHDVKDANLPKVSE 185
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
P ++ NF + LG R +++ LFP+ P+ + +RVVTF N DFI RHH Y
Sbjct: 186 QFPHIICENFTSELGKRTANILRHLFPR-PKEKSKRVVTFANSVDFISVRHHTYDM---- 240
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
K KS L E GPRF L+L L+ GT D + EW +P
Sbjct: 241 ----------PKGPKS---------LHLNEIGPRFELRLYQLKLGTVDQDDADIEWSLRP 281
Query: 262 EMDTSRRR 269
M ++++R
Sbjct: 282 FMRSAKKR 289
>gi|328856726|gb|EGG05846.1| hypothetical protein MELLADRAFT_63883 [Melampsora larici-populina
98AG31]
Length = 288
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 123/229 (53%), Gaps = 27/229 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKILITT R S++ F E+ + PN+H RGTY + +I + T +++VH +
Sbjct: 82 PKILITTSRNPSSKLLQFSKEMRLIFPNAHRVNRGTYVMGEIAAACRANAITDLLIVHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDAL++ P GPT F L +VLR D+ + T P LV + F T+LG R+
Sbjct: 142 RGIPDALVVSHFPHGPTVLFTLHNVVLRHDVPSGSTSTVSEQYPHLVFDGFGTKLGSRIM 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ +RV+TF NQ DFI FRHH ++ KT
Sbjct: 202 SVLKYLFP-VPKEESKRVMTFSNQADFISFRHHVFV----------------------KT 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
S ++V +L E GPRF ++ ++ GT + K + EWV +P T+R+R
Sbjct: 239 SHKEV--QLAEVGPRFDMRPYEIRQGTLEQKEADQEWVLRPYQRTARKR 285
>gi|116207948|ref|XP_001229783.1| hypothetical protein CHGG_03267 [Chaetomium globosum CBS 148.51]
gi|88183864|gb|EAQ91332.1| hypothetical protein CHGG_03267 [Chaetomium globosum CBS 148.51]
Length = 440
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 121/218 (55%), Gaps = 14/218 (6%)
Query: 64 LLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGL-----PDGP 118
L + IP S + Y +++I ++AK + +T+++VVH + + P L + L P GP
Sbjct: 228 LATYIPRSAHRYGHKYSVREIAKFAKNRGYTALLVVHEDLKRPSQLSVCHLNGEDAPPGP 287
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
T + + K I HGNPT H PEL+LN F T LG + + +LFP PE GR+V
Sbjct: 288 TLTYTIRNYQPGKAILGHGNPTNHYPELLLNGFKTPLGLLAAKSMNTLFPPKPELAGRQV 347
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
+T HNQRD+IFFR HRYIF +E++ ++ N + A D K E + + LQE GPR TL
Sbjct: 348 LTLHNQRDYIFFRRHRYIF--REARATEKNVQGA-DGK-EMDGVKGIRAGLQEIGPRMTL 403
Query: 239 KLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 272
KL + G G E +W K +M+ R RF L
Sbjct: 404 KLRRVDKG-IGRAGSEGDDALKWEWKAKMEKKRTRFNL 440
>gi|444724794|gb|ELW65385.1| Spermatogenesis-associated protein 1 [Tupaia chinensis]
Length = 430
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 92/145 (63%), Gaps = 31/145 (21%)
Query: 126 KLVLRKDIKNHG----NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTF 181
K+++ + HG +PT H PE++LNNF TRLGH +GR+ SLFP P+F GR+V TF
Sbjct: 78 KILITTSDRPHGRRGKDPTEHKPEIILNNFTTRLGHSIGRMFASLFPHDPQFIGRQVATF 137
Query: 182 HNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV 241
HNQRD+IFFR HRYIF++++ G +QE GPRFTLKL
Sbjct: 138 HNQRDYIFFRFHRYIFKSEKKVG------------------------IQELGPRFTLKLR 173
Query: 242 SLQHGTFDTKGGEFEWVHK---PEM 263
SLQ GTFD+K GE+EWVHK PE+
Sbjct: 174 SLQKGTFDSKYGEYEWVHKALQPEL 198
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTC 50
P+TI+N R PDET+ P+D+E+ DEF+S + +PKILITT
Sbjct: 36 VPKTIDNQRVPDETIVDPNDEEVAYDEATDEFASYFNRQTSPKILITTS 84
>gi|388852883|emb|CCF53568.1| probable IMP4-component of the U3 small nucleolar ribonucleoprotein
[Ustilago hordei]
Length = 290
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 142/276 (51%), Gaps = 40/276 (14%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDA------DEFSSILKQGCA-PKILITTCRFNSN 55
P ++ T+E E++ R D L A DA DE+S + G P++L+TT R S+
Sbjct: 43 PPSLAGTKEA-ESLGR--DLSLDAAQDAPGSSIDDEYS---RAGTYDPRVLVTTSRDPSS 96
Query: 56 RGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLP 115
R F E+ + PNS RG Y + + A+ T ++V+H +R PDA+++ P
Sbjct: 97 RLTQFAKEVRLLFPNSTRLNRGGYTVSDLAAAARSNGITDMVVLHEHRGVPDAMVVSHFP 156
Query: 116 DGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 173
GPT F L +VLR ++ H N T P L+ N +RLG RV ++ LFP P+
Sbjct: 157 HGPTLLFTLHNVVLRHEVSAHANSTVSEQYPHLIFENLNSRLGSRVMSALKFLFP-VPKD 215
Query: 174 RGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 233
+RV++F NQ DFI FRHH +I KTS ++V +L E G
Sbjct: 216 ESKRVMSFVNQNDFISFRHHVFI----------------------KTSHREV--QLAEVG 251
Query: 234 PRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
PRF ++ ++ GT D + EWV +P M+T+++R
Sbjct: 252 PRFEARVYEIKQGTIDQGEADTEWVLRPYMNTAKKR 287
>gi|399218220|emb|CCF75107.1| unnamed protein product [Babesia microti strain RI]
Length = 296
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 136/257 (52%), Gaps = 45/257 (17%)
Query: 14 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
E V DD+ +AGN +L PK+LITT R S+R F+ EL +IPNS
Sbjct: 65 EAVSHIDDEYTYAGN-------LLFYLGEPKVLITTSRDPSSRLLQFVKELRLMIPNSER 117
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNR--------REPDALLIIGLPDGPTAHFKLS 125
RG+Y LK +I +AK K + +++VH +R +PDA+++ LP GPTA+F+LS
Sbjct: 118 LNRGSYILKDLIFFAKAKQISDVVLVHEHRGNKYDIYLGQPDAMIVSHLPSGPTAYFQLS 177
Query: 126 KLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
+ LR D+ PT P L+ +NF T+LG RV +++ LFP + + RV++F N
Sbjct: 178 DVKLRHDLPEKP-PTLSEAYPHLIFHNFTTKLGLRVRDILRYLFPPA-NMQETRVLSFIN 235
Query: 184 QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
+RD I FRHH ++ +KE+ L E GPRF+L++ +
Sbjct: 236 ERDIIHFRHH--VWNSKENNV------------------------LYELGPRFSLRIFRI 269
Query: 244 QHGTFDTKGGEFEWVHK 260
GT D K E EW ++
Sbjct: 270 DLGTMDMKSVETEWAYR 286
>gi|170586022|ref|XP_001897780.1| Brix domain containing protein [Brugia malayi]
gi|158594804|gb|EDP33383.1| Brix domain containing protein [Brugia malayi]
Length = 292
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 131/249 (52%), Gaps = 30/249 (12%)
Query: 23 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK 82
E+ A +D ++S PK+++TT R S + F+ E+ + PN+ RG YD+K
Sbjct: 63 EVLAIDDEYRYAS----AVDPKVVLTTSREPSAKLKIFLKEMRLMFPNAQRINRGHYDIK 118
Query: 83 KIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH 142
K+I+ K D T I+++ R PD +++ LP GPTA+F L+ +V+R ++ + G +
Sbjct: 119 KLIQACKANDITDFILLYETRGNPDGMIVCHLPFGPTAYFTLANVVMRHEVPDCGTMSEE 178
Query: 143 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKES 202
P L+ ++ + LG R+ +++ LFP P+ RR+VTF N +DFI FRHH Y
Sbjct: 179 YPHLIFDSLNSALGRRLTTILKHLFP-VPKIDSRRIVTFSNTQDFISFRHHTY------- 230
Query: 203 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE-FEWVHKP 261
+KD E +L+E GPRF +K ++ GT D E EW +
Sbjct: 231 ---------SKDEHGE--------IKLKEIGPRFEMKPYLIKMGTIDNADAERTEWALRS 273
Query: 262 EMDTSRRRF 270
++SR+R
Sbjct: 274 YTNSSRKRL 282
>gi|326492666|dbj|BAJ90189.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493716|dbj|BAJ85319.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326500000|dbj|BAJ90835.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 136/260 (52%), Gaps = 37/260 (14%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
D V R D+ +AG E PKIL+TT R S F+ EL V PNS
Sbjct: 63 DRAVPRSIIDDEYAGATLRE----------PKILLTTSRNPSAPLTQFVKELKVVFPNSQ 112
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG + +I+E + + T +I+VH +R +PD L++ LP GPTA+F L +V R D
Sbjct: 113 RMNRGGQVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHD 172
Query: 133 IKNH---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 189
IK+ G + P L+L+NF T+ G R +++ LFP P+ +R++TF N+ D+I
Sbjct: 173 IKDRKAMGKMSEAYPHLILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYIS 231
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
FRHH Y E G G K+ D L+E GPRF L+L ++ GT D
Sbjct: 232 FRHHIY-----EKHG----GPKSID--------------LKEVGPRFELRLYQIKRGTVD 268
Query: 250 TKGGEFEWVHKPEMDTSRRR 269
+ E+V +P M+T++++
Sbjct: 269 QSEAQNEFVLRPYMNTAKKQ 288
>gi|242096898|ref|XP_002438939.1| hypothetical protein SORBIDRAFT_10g028620 [Sorghum bicolor]
gi|241917162|gb|EER90306.1| hypothetical protein SORBIDRAFT_10g028620 [Sorghum bicolor]
Length = 293
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 27/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKIL+TT R S F+ EL V PNS RG + +I+E + D T +I+VH +
Sbjct: 83 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHDITDLILVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH---GNPTGHIPELVLNNFATRLGHRV 159
R +PD L++ LP GPTA+F L +V R DIK+ G + P L+L+NF+T++G R
Sbjct: 143 RGQPDGLIVSHLPHGPTAYFGLLNVVTRHDIKDRKTMGKMSEAYPHLILDNFSTQIGERT 202
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ +R++TF N+ D+I FRHH Y E G G K+ D
Sbjct: 203 ATILKHLFP-VPKPDSKRIITFANRDDYISFRHHVY-----EKPG----GPKSID----- 247
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L+E GPRF L+L ++ GT + + E+V +P ++T++++
Sbjct: 248 ---------LKEVGPRFELRLYQIKLGTVEQNEAQSEFVLRPYINTAKKQ 288
>gi|209489462|gb|ACI49221.1| hypothetical protein Csp3_JD05.006 [Caenorhabditis angaria]
Length = 291
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F E+ V PNS RG YD+K++++ + +D T +IV+
Sbjct: 78 PKIVITTSRDPSSRLKMFSKEMRLVFPNSQRINRGHYDVKQLVQACRAQDTTDLIVLTET 137
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +
Sbjct: 138 RGQPDGLIVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGLRFTSI 197
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D++ +RHH Y +D G+
Sbjct: 198 LKHLFP-VPKSDSKRVMTFANTDDYLSYRHHVY--------KTDEAGE------------ 236
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF LK ++ GT + E EWV + +T+R+R FL
Sbjct: 237 ----IELTEVGPRFELKPYQIKLGTLENLAAAEDEWVLRTYTNTARKRQFL 283
>gi|198430292|ref|XP_002129644.1| PREDICTED: similar to LOC549383 protein [Ciona intestinalis]
Length = 288
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ + PNS RG +++K ++ + D T I++H +
Sbjct: 83 PKIMVTTSRDPSSKLKQFAKEVKLIFPNSQRLNRGNHEMKALVAACRANDVTDFIILHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L+I LP GPTA+F +S V+R DI + G + P L+ +NF ++LG RV +
Sbjct: 143 RGNPDGLIISHLPYGPTAYFNISGCVMRHDIPDVGTMSEVYPHLIFHNFKSKLGERVKTI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
+Q+LFP P+ +R ++F N+ DFI FRHH Y SK N
Sbjct: 203 LQALFP-VPKDESKRTISFINEDDFISFRHHNY------SKPDHKN-------------- 241
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
L+E GPRF L+L ++ GT D + + EW M+T+++R L
Sbjct: 242 ----IELKEIGPRFQLRLYEIKLGTIDEEASADTEWRLHSFMNTAKKRRHL 288
>gi|195039076|ref|XP_001990856.1| GH18024 [Drosophila grimshawi]
gi|193895052|gb|EDV93918.1| GH18024 [Drosophila grimshawi]
Length = 298
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 28/229 (12%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL + PN+ RG Y + +++ + +FT I+
Sbjct: 78 GCQDPKIMLTTSHEPSSRLKMFVKELRLIFPNAQQMNRGKYQINALMQACRANNFTDFII 137
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD+L++ LP GPTA F +S + +R DI + G + P L+ +NF + + R
Sbjct: 138 VHEHRGIPDSLVVCHLPFGPTAFFNISDVTMRHDIPDIGPMSEQKPHLIFSNFKSNIALR 197
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ R+++F N D I FRHH+Y + KE K
Sbjct: 198 TVKILKHLFP-VPKESSERIMSFINNEDKIVFRHHQYKYVNKEIK--------------- 241
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTS 266
L E GPRFTLKL ++ GT + K + EWV++P ++T+
Sbjct: 242 ----------LTEAGPRFTLKLYQIKLGTLENIKAVDTEWVNRPYLNTT 280
>gi|115498000|ref|NP_001069085.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Bos taurus]
gi|122064257|sp|Q0VD01.1|IMP4_BOVIN RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|111304621|gb|AAI19910.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Bos
taurus]
gi|296490786|tpg|DAA32899.1| TPA: U3 small nucleolar ribonucleoprotein protein IMP4 [Bos taurus]
Length = 291
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 124/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ D+I FRHH Y +KT+
Sbjct: 203 LRYLFP-VPKDDSRRVITFANQDDYISFRHHVY----------------------KKTNH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+ +R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 288
>gi|417409636|gb|JAA51316.1| Putative u3 small nucleolar ribonucleoprotein snornp component,
partial [Desmodus rotundus]
Length = 315
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 107 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 166
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI N G + P L+++ ++RLG RV +
Sbjct: 167 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPNLGTMSEAKPHLIMHGLSSRLGKRVSDI 226
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y KTS
Sbjct: 227 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------RKTSH 263
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 264 RDV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 312
>gi|426198218|gb|EKV48144.1| hypothetical protein AGABI2DRAFT_67378, partial [Agaricus bisporus
var. bisporus H97]
Length = 308
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 126/244 (51%), Gaps = 30/244 (12%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S Q PKI+ITT R S++ F E+ V PNSH RG Y +K + E +
Sbjct: 72 DEYSRAGIQD--PKIVITTSRDPSSKLLQFTKEMRLVFPNSHRINRGNYVIKDLSEACRA 129
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVL 148
D T +IV+H +R PDA+++ P GPT +F LS + LR DI N+ T P L+
Sbjct: 130 NDVTDLIVLHEHRGIPDAMIVSHFPHGPTVYFTLSNVQLRHDINNYKGSTVSEQYPHLIF 189
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NF+++LG R+ +++ LFP P+ +RV+TF N+ DFI FRHH ++ K+
Sbjct: 190 ENFSSKLGGRIRDVLKFLFP-VPKEDSKRVMTFSNESDFISFRHHVFVTIPKD------- 241
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
+L E GPRF +K ++ GT + E EWV T+R+
Sbjct: 242 ------------------VQLAEVGPRFEMKPYEIRQGTIEQVEAEREWVLSHYTRTARK 283
Query: 269 RFFL 272
R L
Sbjct: 284 RNVL 287
>gi|301791726|ref|XP_002930830.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Ailuropoda melanoleuca]
Length = 291
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 124/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT+
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTNH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RSV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|195151675|ref|XP_002016764.1| GL21897 [Drosophila persimilis]
gi|194111821|gb|EDW33864.1| GL21897 [Drosophila persimilis]
Length = 293
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL + PN+ RG Y L ++ + + T ++
Sbjct: 77 GCQDPKIMLTTSHNPSSRLKMFMKELRLIFPNAQQMNRGKYQLTTLMHACRANNVTDFLI 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD+L+I LP GPT+ F +S +++R DI + G+ + P L+ NNF + +G R
Sbjct: 137 VHEHRGIPDSLVICHLPYGPTSFFNISDVIMRHDIPDIGHMSEQKPHLIFNNFKSPIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV++F N D I FRHH+Y K+ E
Sbjct: 197 TVQILKHLFP-VPKENSQRVISFLNHNDSIIFRHHQY-----------------KNINRE 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRR 269
+ L E GPRF LKL ++ GT + K + EWV++P ++TS ++
Sbjct: 239 LS--------LSEIGPRFVLKLYQIKLGTLENIKAADTEWVNRPYLNTSNKK 282
>gi|198477800|ref|XP_002136433.1| GA22540 [Drosophila pseudoobscura pseudoobscura]
gi|198145184|gb|EDY71888.1| GA22540 [Drosophila pseudoobscura pseudoobscura]
Length = 293
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 28/232 (12%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL + PN+ RG Y L ++ + + T ++
Sbjct: 77 GCQDPKIMLTTSHNPSSRLKMFMKELRLIFPNAQQMNRGKYQLTTLMHACRANNVTDFLI 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD+L+I LP GPT+ F +S +++R DI + G+ + P L+ NNF + +G R
Sbjct: 137 VHEHRGIPDSLVICHLPYGPTSFFNISDVIMRHDIPDIGHMSEQKPHLIFNNFKSPIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV++F N D I FRHH+Y K+ E
Sbjct: 197 TVQILKHLFP-VPKENSQRVISFLNHNDSIIFRHHQY-----------------KNINRE 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRR 269
+ L E GPRF LKL ++ GT + K + EWV++P ++TS ++
Sbjct: 239 LS--------LSEIGPRFVLKLYQIKLGTLENIKAADTEWVNRPYLNTSNKK 282
>gi|357144981|ref|XP_003573481.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Brachypodium distachyon]
Length = 293
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 37/260 (14%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
D V R D+ +AG E PKIL+TT R S F+ EL V PNS
Sbjct: 63 DRAVPRSIIDDEYAGAALRE----------PKILLTTSRNPSAPLTQFVKELKVVFPNSQ 112
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG + +I+E + + T +I+VH +R +PD L++ LP GPTA+F L +V R D
Sbjct: 113 RMNRGGQVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHD 172
Query: 133 IKNH---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 189
IK+ G + P L+L+NF T+ G R +++ LFP P+ +R++TF N+ D+I
Sbjct: 173 IKDRKAMGKMSEAYPHLILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYIS 231
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
FRHH Y E G G K+ D L+E GPRF L+L ++ GT D
Sbjct: 232 FRHHIY-----EKHG----GPKSID--------------LKEVGPRFELRLYQIKRGTVD 268
Query: 250 TKGGEFEWVHKPEMDTSRRR 269
+ E+V +P ++T++++
Sbjct: 269 QSEAQNEFVLRPYINTAKKQ 288
>gi|281349580|gb|EFB25164.1| hypothetical protein PANDA_021420 [Ailuropoda melanoleuca]
Length = 254
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 124/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 46 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 105
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 106 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 165
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT+
Sbjct: 166 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTNH 202
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 203 RSV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 251
>gi|385302644|gb|EIF46768.1| u3 small nucleolar ribonucleoprotein imp4 [Dekkera bruxellensis
AWRI1499]
Length = 288
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 130/260 (50%), Gaps = 32/260 (12%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
DET+ + +++ D+ + L PK++ITT R S R F E+ +IPNS
Sbjct: 59 DETIQKENEE-------VDDEYARLSGFVEPKVVITTSRSPSARLSQFTKEMRLMIPNSI 111
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG Y + ++E K+ T I+V+H +R P L + LP GPTA F L +VLR D
Sbjct: 112 RINRGNYIMPALVESCKRSGITDIVVIHEHRGVPSTLTVSHLPYGPTAVFTLHNVVLRHD 171
Query: 133 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
I N GN + P L+ NF T+LG R+ +++++FP + RV++F N+ DF+ R
Sbjct: 172 IYNVGNISEAYPHLIFENFTTKLGQRISTILKNIFPPGVKKESPRVISFVNKNDFVSVRQ 231
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
H Y+ K KD L E GPR ++ S++ GT D +
Sbjct: 232 HLYV--------------KTKDD-----------VELSEVGPRLEMRPFSIKLGTLDDED 266
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
+ EW+ + + T+ R+ +L
Sbjct: 267 ADVEWMLRRFVRTASRKNYL 286
>gi|401425593|ref|XP_003877281.1| U3 small nuclear ribonucleoprotein (snRNP),putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322493526|emb|CBZ28814.1| U3 small nuclear ribonucleoprotein (snRNP),putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 288
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 131/242 (54%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+++ ++ P +L+TT R S + F E+ ++PN+ RG+ + ++++ A+K
Sbjct: 73 DEYANAGQED--PHVLVTTSRNASQKLLEFAKEVRLIVPNAVRMNRGSLSVHQLMDAARK 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+++T ++V+ ++ PD+L++ LP GPT F + LV R DI + G + P L+ N
Sbjct: 131 ENYTDVLVLQESQGVPDSLIVSHLPLGPTVTFTIHNLVARHDIDDVGTMSEQYPHLIFEN 190
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F+T+LG R+ +++ LFP P+ RV+TF N+ DFI FRHH +
Sbjct: 191 FSTKLGIRIKDVLRYLFP-VPKADASRVLTFDNENDFISFRHHTF--------------- 234
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K EK +Q L E GPRF L + GT + E EWV +P M+T+++R
Sbjct: 235 -----KREKGKKQ---VELTEVGPRFELTPYRIVLGTLEMDDAETEWVLQPYMNTAKKRR 286
Query: 271 FL 272
L
Sbjct: 287 LL 288
>gi|335308224|ref|XP_003361145.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Sus scrofa]
Length = 256
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 48 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 107
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 108 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFSSRLGKRVSDI 167
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ D+I FRHH Y +KT
Sbjct: 168 LRYLFP-VPKDDSRRVITFANQDDYISFRHHVY----------------------KKTDH 204
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + + EW P +T+ +R FL
Sbjct: 205 RNV--ELTEVGPRFEMKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 253
>gi|345790694|ref|XP_534545.3| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Canis
lupus familiaris]
Length = 291
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 123/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P ++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGFIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLIMHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT+
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTNH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|170090818|ref|XP_001876631.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648124|gb|EDR12367.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 303
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 122/232 (52%), Gaps = 28/232 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S++ F EL V P SH RG Y +K++ E + + T +IV+H +
Sbjct: 82 PKIVITTSRDPSSKLLQFTKELRLVFPGSHRINRGNYVVKELAEACRANEVTDLIVLHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT +F L+ + LR DI + N T P L+ NF++RLG RV
Sbjct: 142 RGIPDAMIVSHFPHGPTVYFTLNNVALRHDIGTYKNSTVSEQYPHLIFENFSSRLGERVR 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ +RV+TF N DFI FRHH ++ KT
Sbjct: 202 DVLKYLFP-VPKEDSKRVMTFANDDDFISFRHHVFV----------------------KT 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+Q +L E GPRF +K ++ GT + E EWV T+++R L
Sbjct: 239 GRQ---VQLAEVGPRFEMKPYEIRQGTIEQTEAEREWVLTHYTRTAKKRSVL 287
>gi|350593294|ref|XP_003133355.3| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Sus scrofa]
Length = 408
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 200 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 259
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 260 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFSSRLGKRVSDI 319
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ D+I FRHH Y +KT
Sbjct: 320 LRYLFP-VPKDDSRRVITFANQDDYISFRHHVY----------------------KKTDH 356
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF +KL ++ GT + + + EW P +T+ +R FL
Sbjct: 357 RNV--ELTEVGPRFEMKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 405
>gi|312065971|ref|XP_003136047.1| brix domain-containing protein [Loa loa]
gi|307768782|gb|EFO28016.1| brix domain-containing protein [Loa loa]
Length = 291
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 40 GCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVV 99
PK+++TT R S + F+ E+ + PN+ RG YD+KK+I+ K D T I++
Sbjct: 75 AADPKVVLTTSREPSAKLKIFLKEMRLMFPNAQRINRGHYDIKKLIQACKANDITDFILL 134
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRV 159
H R PD +++ LP GPTA+F L+ +V+R ++ G + P L+ + + LG R+
Sbjct: 135 HETRGNPDGMIVCHLPFGPTAYFTLANVVMRHEVPECGTMSEEYPHLIFDGLNSALGRRL 194
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ RR+VTF N +DFI FRHH Y +KD E
Sbjct: 195 TTILKHLFP-VPKIDSRRIVTFSNTQDFISFRHHTY----------------SKDEHGE- 236
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE-FEWVHKPEMDTSRRR 269
+L+E GPRF ++ ++ GT D E EW + +++R+R
Sbjct: 237 -------IKLKEIGPRFEMRPYLIKMGTIDNADAESTEWALRSYTNSARKR 280
>gi|340507174|gb|EGR33184.1| u3 small nucleolar ribonucleoprotein protein, putative
[Ichthyophthirius multifiliis]
Length = 310
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 133/258 (51%), Gaps = 12/258 (4%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
DD+ + N D+ + Q P ILITT R S R +F EL+S PNS RG
Sbjct: 54 DDNTIIPRNHIDD-EYAMAQYRDPMILITTSRSPSPRLISFQKELVSFFPNSERMNRGAT 112
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--G 137
+K ++++ +K+ T +++VH +R EPD ++I P GPT + + VLR DIKN
Sbjct: 113 VIKNLVQFCNQKNVTDLVIVHEHRGEPDGMIISHFPLGPTLYLGVKNCVLRHDIKNAKLD 172
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
+ + P L+ +NF+T LG R+ + + LFP P+ ++V++F N D I RH Y
Sbjct: 173 SISQQNPHLIFHNFSTALGQRIMNIFKHLFP-IPKIDSKKVISFANNSDLISVRHCLYEK 231
Query: 198 ETKE------SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
+ S ++++ + EK+ + V L E GPRF LK + GT D
Sbjct: 232 SDQNRLNEVVSFANNSDLISVRHCLYEKSDYKTV--ELNELGPRFELKPYQISLGTIDQT 289
Query: 252 GGEFEWVHKPEMDTSRRR 269
EWV +P M+T+ RR
Sbjct: 290 EATKEWVLRPYMNTATRR 307
>gi|157872351|ref|XP_001684724.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
major strain Friedlin]
gi|68127794|emb|CAJ06199.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
major strain Friedlin]
Length = 288
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 129/242 (53%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+++ ++ P +L+TT R S + F E+ ++PN+ RG + ++++ A+K
Sbjct: 73 DEYANAGQED--PHVLVTTSRNASQKLLEFAKEVRLIVPNAVRMNRGNLSVHQLMDAARK 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+++T ++V+ ++ PD+L++ LP GPT F + LV R DI G + P LV N
Sbjct: 131 ENYTDVLVLQESQGVPDSLIVSHLPLGPTVTFTIHNLVARHDIDGVGTMSEQYPHLVFEN 190
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F+T+LG R+ +++ LFP P+ RV+TF N+ DFI FRHH +
Sbjct: 191 FSTKLGIRIKDVLRYLFP-VPKADASRVLTFDNENDFISFRHHTF--------------- 234
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K EK +Q L E GPRF L + GT + E EWV +P M+T+++R
Sbjct: 235 -----KKEKGKKQ---VELTEVGPRFELTPYRIVLGTLEMDDAETEWVLQPYMNTAKKRR 286
Query: 271 FL 272
L
Sbjct: 287 LL 288
>gi|363753486|ref|XP_003646959.1| hypothetical protein Ecym_5387 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890595|gb|AET40142.1| hypothetical protein Ecym_5387 [Eremothecium cymbalariae
DBVPG#7215]
Length = 283
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 131/260 (50%), Gaps = 35/260 (13%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
DETV DDE A S I+ PK+L+TT R S + F E+ + P S
Sbjct: 59 DETVQDSIDDEYSAT------SGIVD----PKLLVTTSRDPSTKLSQFAKEVKLLFPTSV 108
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG + + +++ +K T ++V+H +R P +L I P GPTA F L +VLR D
Sbjct: 109 RLNRGNFVMNNLVDACQKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAFFTLHNVVLRHD 168
Query: 133 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
I N GN + P L+ +NF T LG RV +++++LFP SP+ RV+TF N+ DFI R
Sbjct: 169 ILNAGNQSEVNPHLIFDNFTTPLGKRVVKILKNLFPASPKKDSARVITFANRGDFISVRQ 228
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
H Y+ +T+E L E GPRF ++L L+ GT + K
Sbjct: 229 HVYV-KTREG------------------------VELAEVGPRFEMRLFELRLGTLENKD 263
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
+ EW + + TS R+ +L
Sbjct: 264 ADVEWQLRRFIRTSSRKDYL 283
>gi|291391389|ref|XP_002712437.1| PREDICTED: IMP4, U3 small nucleolar ribonucleoprotein, homolog
[Oryctolagus cuniculus]
Length = 373
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 165 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 224
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F +RLG RV +
Sbjct: 225 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFTSRLGKRVSDI 284
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 285 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 321
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 322 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 370
>gi|402892256|ref|XP_003909334.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Papio
anubis]
Length = 291
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L+I LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIISHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|294899178|ref|XP_002776523.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|294953195|ref|XP_002787642.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|239883555|gb|EER08339.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|239902666|gb|EER19438.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
Length = 304
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 126/228 (55%), Gaps = 19/228 (8%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++L+TT R S+R F+ E+ +IPNS RGTY +K +++ +K D + +++VH +
Sbjct: 82 PRVLVTTSRNPSSRLGKFVKEVRLLIPNSQRINRGTYVMKDLVDLCRKNDISDMVIVHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R +PD L++ LP GPTA+F LS +VLR D+ + N P L+ +NF +G RV
Sbjct: 142 RGQPDGLIVSHLPYGPTAYFGLSDVVLRHDLPEKPPNMPETYPHLIFHNFGGNIGTRVQT 201
Query: 162 LIQSLFPQS-PEFRGRRVVTFHNQ-RDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
++ +LFP S P+ R +TF N D I FRHH + TK +K D K+E
Sbjct: 202 VLSALFPPSKPD--STRTITFANDGGDCIGFRHHTFEKPTKATKNR-------ADVKAED 252
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
+L E GPRF ++L L+ GT D + EWV +P + R
Sbjct: 253 -------VKLYEQGPRFNMQLYRLELGTLDMPDVKTEWVLRPHFNNQR 293
>gi|346468039|gb|AEO33864.1| hypothetical protein [Amblyomma maculatum]
Length = 288
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 111/210 (52%), Gaps = 26/210 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ + PNS RG Y++K++IE + + T IVVH
Sbjct: 83 PKIVVTTSRDPSSKLKQFAKEIRLIFPNSQRMNRGGYEMKQLIEACRANEVTDFIVVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F + V+R DI N G + P L+ +NF TRLG RV +
Sbjct: 143 RGNPDGLVVCHLPYGPTAYFTILNTVMRHDIPNIGTMSEAYPHLIFHNFKTRLGKRVMNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH + K+ KD K
Sbjct: 203 LKYLFP-VPKEDSHRVITFANQDDYISFRHHTF-------------KKEGKDYK------ 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
L+E GPRF LKL Q G G
Sbjct: 243 ------LEEVGPRFELKLXRDQAGNARCYG 266
>gi|395849510|ref|XP_003797366.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
[Otolemur garnettii]
Length = 321
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 113 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 172
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 173 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 232
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y KT
Sbjct: 233 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------RKTDH 269
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 270 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 318
>gi|148682503|gb|EDL14450.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Mus
musculus]
Length = 299
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 91 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 150
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 151 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 210
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 211 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 247
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 248 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 296
>gi|429328789|gb|AFZ80549.1| U3 small nucleolar ribonucleoprotein, putative [Babesia equi]
Length = 293
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 130/226 (57%), Gaps = 26/226 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+LITT R S+R F E+ +IPNS RG+Y LK ++++ + KD + I++++ +
Sbjct: 83 PKVLITTSRNPSSRLSQFAKEMRLIIPNSERLNRGSYILKDLVDFCRAKDVSDIVLLYEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH--IPELVLNNFATRLGHRVG 160
R +PDA+++ LP GPT++F+LS ++LR D+ PT P L+ +NF ++LG+R
Sbjct: 143 RGKPDAMVVSHLPHGPTSYFQLSDVILRHDLPE-SPPTMSEAYPHLIFHNFTSQLGNRFK 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK-GSDANGKKAKDAKSEK 219
+++ LFP RV++F N+ D IFFRHH + E+K G+D
Sbjct: 202 DILRYLFPPQ-NTNETRVLSFINKADRIFFRHHVW----NETKIGAD------------- 243
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDT 265
K +T L E GPRFTLK ++ GT D + E EW +P +T
Sbjct: 244 ---DKNVT-LTEIGPRFTLKPFKIELGTVDMRDLEVEWTLRPYFNT 285
>gi|358059282|dbj|GAA94970.1| hypothetical protein E5Q_01625 [Mixia osmundae IAM 14324]
Length = 481
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 134/231 (58%), Gaps = 24/231 (10%)
Query: 28 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISEL---------LSVIPNSHYYKRGT 78
+D DE + G +IL+TT + F+ EL +IP K
Sbjct: 115 DDEDE-----QAGMTGRILLTTAPRPTPATYDFLKELQGLFGGPMLAEIIPR----KSPR 165
Query: 79 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 138
++L K+ ++A K+ ++++IVV + + P +L + LP GPTAHF+L+ ++ K I++H
Sbjct: 166 HELSKVCKWAAKRGYSALIVVGEDHKHPSSLTMTRLPLGPTAHFRLTSILGCKQIRDHAR 225
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFE 198
PT H PELVL+NF+T +G VGRL Q LFP P+ +GR+VV HNQRDF+FFR RY F
Sbjct: 226 PTAHAPELVLSNFSTPIGLSVGRLFQGLFPPMPDIQGRQVVAIHNQRDFVFFRRFRYAFA 285
Query: 199 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
+ + GK + + ++ + + T+LQE GPRFTLKL ++ GT +
Sbjct: 286 VR------SEGKISTELAEKRGMDKDIRTKLQEIGPRFTLKLRWIKRGTLE 330
>gi|57527503|ref|NP_001009700.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Rattus
norvegicus]
gi|190684705|ref|NP_848716.2| U3 small nucleolar ribonucleoprotein protein IMP4 [Mus musculus]
gi|73621061|sp|Q8VHZ7.1|IMP4_MOUSE RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|73621063|sp|Q5PQR5.1|IMP4_RAT RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|18478512|gb|AAL73190.1|AF334609_1 IMP4 [Mus musculus]
gi|26351353|dbj|BAC39313.1| unnamed protein product [Mus musculus]
gi|47682925|gb|AAH69930.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Mus
musculus]
gi|56269391|gb|AAH87066.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Rattus
norvegicus]
gi|74184986|dbj|BAE39105.1| unnamed protein product [Mus musculus]
gi|74185410|dbj|BAE30178.1| unnamed protein product [Mus musculus]
gi|74212607|dbj|BAE31042.1| unnamed protein product [Mus musculus]
gi|149046417|gb|EDL99310.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Rattus
norvegicus]
Length = 291
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|440911983|gb|ELR61596.1| U3 small nucleolar ribonucleoprotein IMP4, partial [Bos grunniens
mutus]
Length = 291
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTASEAKPHLIMHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT+
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTNH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+ +R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 288
>gi|209877867|ref|XP_002140375.1| U3 small nucleolar ribonucleoprotein IMP4 [Cryptosporidium muris
RN66]
gi|209555981|gb|EEA06026.1| U3 small nucleolar ribonucleoprotein IMP4, putative
[Cryptosporidium muris RN66]
Length = 287
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 116/220 (52%), Gaps = 25/220 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKILITT R S+R F+ EL +IPNS RG Y LK + + + + +I+VH +
Sbjct: 82 PKILITTSRSPSSRLVQFVKELSLIIPNSSRINRGGYILKDLCHLCRTNEASDLIIVHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 161
R EPD+++I P GPTA+F LSK+ LR D+ + P L+ NF ++LG R+
Sbjct: 142 RGEPDSMIISHFPHGPTAYFGLSKITLRHDLNVKPKNLSQVRPHLIFQNFGSKLGMRISN 201
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFPQ+ F +RV F N D I FRH Y +E K+ KD +
Sbjct: 202 ILKFLFPQAAPF-SKRVHVFLNNNDLIIFRH--YTWEKKDD---------VKDIE----- 244
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
L+E GPRF LK ++ GT + K EW KP
Sbjct: 245 -------LEEIGPRFILKPYRIELGTIEMKSLTAEWTLKP 277
>gi|22902285|gb|AAH37602.1| Imp4 protein, partial [Mus musculus]
Length = 296
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 88 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 147
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 148 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 207
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 208 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 244
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 245 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 293
>gi|12850634|dbj|BAB28797.1| unnamed protein product [Mus musculus]
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|410929513|ref|XP_003978144.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Takifugu rubripes]
Length = 316
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 124/231 (53%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S+R F E+ + P + RG +++ +++ + + T ++++H
Sbjct: 108 PKIMVTTSRDPSSRLKMFAKEVKLMFPGAQRMNRGNHEIPALVQACRANNVTDLVIMHET 167
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF ++LG RV +
Sbjct: 168 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAFPHLIFHNFTSQLGRRVSNI 227
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRVVTF NQ DFI FRHH Y K D ++
Sbjct: 228 LKYLFP-VPKEDSRRVVTFANQEDFISFRHHTY---------------KKMDHRN----- 266
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+L E GPRF +KL ++ GT + + + EW T+++R F+
Sbjct: 267 ----IKLTEVGPRFEMKLYMIKLGTLENESTADIEWRLHAYTHTAKKRRFM 313
>gi|397464689|ref|XP_003804202.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Pan
paniscus]
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|354491619|ref|XP_003507952.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cricetulus griseus]
gi|344257900|gb|EGW14004.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Cricetulus
griseus]
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F +RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFTSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|146420716|ref|XP_001486312.1| hypothetical protein PGUG_01983 [Meyerozyma guilliermondii ATCC
6260]
gi|146389727|gb|EDK37885.1| hypothetical protein PGUG_01983 [Meyerozyma guilliermondii ATCC
6260]
Length = 302
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 126/252 (50%), Gaps = 28/252 (11%)
Query: 22 DELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 80
DE N DE+S++ G A PK+++TT R S + F E+ P S RG Y
Sbjct: 78 DESEQVNVDDEYSAL--SGIAEPKVIVTTSRSPSVKLLQFAKEMKLFFPQSVKLNRGNYI 135
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 140
+ +++E KK + T ++V+H +R P +L I P GPTA F L + LR D+ N GN +
Sbjct: 136 VPELVESCKKVNMTDMVVLHEHRGVPTSLTISHFPHGPTAMFSLHNVKLRHDLPNLGNIS 195
Query: 141 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
P L+ NF T LG RV ++++ LFP + RV+TF N DFI RHH Y+ TK
Sbjct: 196 EAYPHLIFENFTTPLGQRVVQILKHLFPPGAKKDSSRVITFVNNDDFITVRHHVYV-RTK 254
Query: 201 ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 260
+S L E GPRF +KL ++ G D K + EW K
Sbjct: 255 DS------------------------VELSEVGPRFEMKLYEVRLGLIDNKDSDIEWQAK 290
Query: 261 PEMDTSRRRFFL 272
+ T+ R+ +L
Sbjct: 291 RFIRTANRKNYL 302
>gi|410210560|gb|JAA02499.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Pan
troglodytes]
gi|410252466|gb|JAA14200.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Pan
troglodytes]
gi|410295126|gb|JAA26163.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog [Pan
troglodytes]
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|410947101|ref|XP_003980292.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Felis
catus]
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P ++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 143 RGTPVGFIVSHLPFGPTAYFTLCNVVMRHDIPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y KT+
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------RKTNH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RSV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|119576019|gb|EAW55615.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast),
isoform CRA_c [Homo sapiens]
Length = 313
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 105 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 164
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 165 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 224
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 225 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 261
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 262 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 310
>gi|297712371|ref|XP_002832744.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
isoform 1 [Pongo abelii]
gi|426337169|ref|XP_004032594.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
[Gorilla gorilla gorilla]
gi|73621062|sp|Q5R947.2|IMP4_PONAB RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|355717137|gb|AES05835.1| brix domain containing 5 [Mustela putorius furo]
Length = 102
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 24/122 (19%)
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
+PT HIPE++LNNF TRLGH VGR+ SLFP +P+F GR+V TFHNQRD+IFFR HRYIF
Sbjct: 5 DPTEHIPEIILNNFTTRLGHSVGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIF 64
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
++++ G +QE GPRFTLKL SLQ GTFD+K GE+EW
Sbjct: 65 KSEKKVG------------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEW 100
Query: 258 VH 259
VH
Sbjct: 101 VH 102
>gi|55729975|emb|CAH91713.1| hypothetical protein [Pongo abelii]
Length = 290
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 82 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 142 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 202 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 239 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 287
>gi|403259111|ref|XP_003922077.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
[Saimiri boliviensis boliviensis]
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|15529982|ref|NP_219484.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Homo sapiens]
gi|73621060|sp|Q96G21.1|IMP4_HUMAN RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4; AltName: Full=Brix
domain-containing protein 4
gi|14603153|gb|AAH10042.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Homo
sapiens]
gi|34596248|gb|AAQ76804.1| hypothetical protein [Homo sapiens]
gi|62988689|gb|AAY24076.1| unknown [Homo sapiens]
gi|124000169|gb|ABM87593.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
[synthetic construct]
gi|157929232|gb|ABW03901.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
[synthetic construct]
gi|158258122|dbj|BAF85034.1| unnamed protein product [Homo sapiens]
gi|158260779|dbj|BAF82567.1| unnamed protein product [Homo sapiens]
gi|189053500|dbj|BAG35666.1| unnamed protein product [Homo sapiens]
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|332265577|ref|XP_003281794.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4
[Nomascus leucogenys]
Length = 409
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 201 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 260
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L+I LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 261 RGTPVGLIISHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 320
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 321 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 357
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 358 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 406
>gi|388452440|ref|NP_001253160.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Macaca mulatta]
gi|355566079|gb|EHH22508.1| hypothetical protein EGK_05792 [Macaca mulatta]
gi|380787741|gb|AFE65746.1| U3 small nucleolar ribonucleoprotein IMP4 [Macaca mulatta]
gi|383422889|gb|AFH34658.1| U3 small nucleolar ribonucleoprotein IMP4 [Macaca mulatta]
Length = 291
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>gi|221054700|ref|XP_002258489.1| hypothetical protein, conserved [Plasmodium knowlesi strain H]
gi|193808558|emb|CAQ39261.1| hypothetical protein, conserved [Plasmodium knowlesi strain H]
Length = 328
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDA-DEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PR+IE DE ++++ DEFS KQG P I+IT+ + S F+
Sbjct: 81 PRSIERLAIFDENKINAENEKFLLNEKCIDEFSDYFKQGKEPNIVITSIKRPSKNTILFM 140
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPTA 120
EL P+ Y R + ++ ++ + + +F++ I++ + P + I LP+GPTA
Sbjct: 141 KELSLTFPHIFYEPRLDHSIEFLMSNSVQNNFSTFILIEEGIDKHPKYMFISTLPNGPTA 200
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+ L+ ++ K T PE+ + NF T +G R+ R + +L P P ++ ++VV
Sbjct: 201 KYSLTNVLYAHKKKTDIEITTLPPEVYITNFNTFIGERIKRQLHTLVPFKPAYKSQKVVV 260
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
F+NQRDFIFFRH +Y F N KK L E GP FTL+L
Sbjct: 261 FYNQRDFIFFRHFKYNF---------LNKKKC---------------TLNEIGPGFTLQL 296
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SL+ G + K +E+V +P+M +R++ +L
Sbjct: 297 LSLKDGLINDKEKMYEFVLRPDMKVNRKKMYL 328
>gi|401884616|gb|EJT48769.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406694214|gb|EKC97546.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 287
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 119/228 (52%), Gaps = 26/228 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F EL PN+ RG +K +++ + T +++VH +
Sbjct: 82 PKVVVTTSRDPSSRLTQFAKELRLCFPNAIRLNRGNTVMKDLVQTCLSQGVTDLVLVHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG-HIPELVLNNFATRLGHRVGR 161
R PDA+++ LP GPT L+ + LR D+ + P L+++ F TRLG RV
Sbjct: 142 RGVPDAMIVSHLPHGPTLSMTLNNVTLRHDVATSDSTVSEQYPHLIMDGFTTRLGERVAS 201
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
++++LFP P+ +RV+TF NQ DFI FRHH + KTS
Sbjct: 202 ILKALFP-VPKDDAKRVMTFANQNDFISFRHHVFA----------------------KTS 238
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
+ V +L E GPRF K ++ GT D + EW+ +P M TS++R
Sbjct: 239 HKDV--QLAEVGPRFEAKPYEIRQGTVDQTEADVEWLLRPYMRTSKKR 284
>gi|146093738|ref|XP_001466980.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
infantum JPCM5]
gi|398019370|ref|XP_003862849.1| U3 small nuclear ribonucloprotein (snRNP), putative [Leishmania
donovani]
gi|134071344|emb|CAM70030.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
infantum JPCM5]
gi|322501080|emb|CBZ36157.1| U3 small nuclear ribonucloprotein (snRNP), putative [Leishmania
donovani]
Length = 288
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+++ ++ P +L+TT R S + F E+ ++PN+ RG + ++++ A+K
Sbjct: 73 DEYANAGQED--PHVLVTTSRNASQKLLEFAKEVRLIVPNAVRMNRGNLSVHQLMDAARK 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+++T ++V+ ++ PD+L + LP GPT F + LV R DI+ G + P L+ N
Sbjct: 131 ENYTDVLVLQESQGVPDSLTVSHLPLGPTVTFTIHNLVARHDIEGVGTMSEQYPHLIFEN 190
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F+T+LG R+ +++ LFP P+ RV+TF N+ DFI FRHH +
Sbjct: 191 FSTKLGIRIKDVLRYLFP-VPKADASRVLTFDNENDFISFRHHTF--------------- 234
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K EK +Q L E GPRF L + GT + E EWV +P M+T+++R
Sbjct: 235 -----KKEKGKKQ---VELTEVGPRFELTPYRIVLGTLEMDDAETEWVLQPYMNTAKKRR 286
Query: 271 FL 272
L
Sbjct: 287 LL 288
>gi|302308389|ref|NP_985285.2| AER430Wp [Ashbya gossypii ATCC 10895]
gi|442570176|sp|Q755T8.2|IMP4_ASHGO RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|299789432|gb|AAS53109.2| AER430Wp [Ashbya gossypii ATCC 10895]
gi|374108511|gb|AEY97418.1| FAER430Wp [Ashbya gossypii FDAG1]
Length = 283
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 122/242 (50%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S+ L PK+++TT R S R F E+ + P S RG Y +K +++ +K
Sbjct: 68 DEYSA-LSGIVDPKVIVTTSRDPSTRLSQFAKEVKLLFPTSVRLNRGNYIMKNLVDACQK 126
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
T ++V+H +R P AL I P GPTA F L +VLR DI N GN + P L+ +N
Sbjct: 127 SGTTDLVVLHEHRGVPTALTISHFPHGPTASFSLHNVVLRHDILNAGNQSEVHPHLIFDN 186
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F T LG RV ++++ +FP + RV+TF N+ DFI R H Y+
Sbjct: 187 FTTPLGQRVVKILKHMFPPGVKKDSPRVITFANRGDFISVRQHVYV-------------- 232
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K +D L E GPRF +KL L GT + K + EW + + T+ R+
Sbjct: 233 KTRDG-----------VELAEVGPRFEMKLYELTLGTLENKDADVEWQLRRFVRTANRKD 281
Query: 271 FL 272
+L
Sbjct: 282 YL 283
>gi|452821416|gb|EME28447.1| hypothetical protein Gasu_41360 [Galdieria sulphuraria]
Length = 292
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 128/251 (50%), Gaps = 36/251 (14%)
Query: 21 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 80
DDE N+ D PK++ITT R S+R F E+ + PNS RG
Sbjct: 70 DDEYARANEID-----------PKVVITTSRDPSSRLSQFAKEVKLLFPNSQRLNRGNLV 118
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI--KNHGN 138
++ ++ K T +I++ R +PD L++ LP GPTA F LS +V+R DI + G
Sbjct: 119 IRDLMTACKNNQVTDVILLSEYRGQPDGLVVCHLPLGPTAFFSLSNVVMRHDIVDTDLGT 178
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFE 198
+ P LV +NF ++LG RV +++ LFP SP+ +R++TF N D I FRHH Y
Sbjct: 179 VSEANPHLVFDNFESKLGWRVKNILKYLFP-SPKPDSKRIITFSNHADIISFRHHLY--- 234
Query: 199 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 258
+G + +D + L E GPRF +KL ++ GT + + EWV
Sbjct: 235 -------QKSGTRPEDIE------------LIEMGPRFDMKLYQIRLGTIEQSHADNEWV 275
Query: 259 HKPEMDTSRRR 269
+P M+T+ +R
Sbjct: 276 LRPYMNTAHKR 286
>gi|123500025|ref|XP_001327749.1| Brix domain containing protein [Trichomonas vaginalis G3]
gi|121910683|gb|EAY15526.1| Brix domain containing protein [Trichomonas vaginalis G3]
Length = 267
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 137/269 (50%), Gaps = 28/269 (10%)
Query: 7 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA-FISELL 65
E+ R + T+ D + DE + G KI +T + G F L
Sbjct: 24 EDRRVENVTIIPEHDPDFQEEAMLDELEPFISGGKQAKIKVTLSTYEEEEGAVKFAHALE 83
Query: 66 SVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLS 125
+IPN Y+ R A ++ FT ++ + + +++ + LP+GP AH++L+
Sbjct: 84 QLIPNCEYHPREGEPFDLTRSRAYEEGFTDLLTLIPHEDTVFSMIHVHLPNGPCAHWRLT 143
Query: 126 KLVLRKDIKNHGN--PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHN 183
K+ L ++I H PT + PE++L F T LG + GR++++LFP +P+F GRRVVTFH
Sbjct: 144 KIKLPEEIGGHPKKLPTSY-PEIILKRFTTSLGKQCGRMLRALFPANPQFEGRRVVTFHQ 202
Query: 184 QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
QRDF+F R ++Y+FE S KV T E GPRFTL+L+ +
Sbjct: 203 QRDFVFCRSYQYLFE----------------------SADKVKT--VEIGPRFTLRLLWM 238
Query: 244 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
Q G ++ G++ + + DT+RR ++L
Sbjct: 239 QEGPYNPASGQYTFYRRIRNDTTRRTWWL 267
>gi|327263907|ref|XP_003216758.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Anolis carolinensis]
Length = 294
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I++TT R S+R F E+ V P + RG +++ ++ K T +++VH +
Sbjct: 86 PRIMVTTSRDPSSRLKMFAKEIKLVFPGAQRMNRGRHEMGALVRACKANGVTDLLIVHEH 145
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F L +V+R DI + G + P L+ +NF +RLG RV +
Sbjct: 146 RGVPDGLIVSHLPFGPTAYFTLCNVVMRHDIPDIGTMSEAHPHLIFHNFTSRLGQRVSSI 205
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF NQ D+I FRHH Y K SD
Sbjct: 206 LKYLFP-VPKEDSKRVITFANQEDYISFRHHVY-------KKSDHRN------------- 244
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
L E GPRF +KL ++ GT + + + EW P T++++ FL
Sbjct: 245 ----VELTEVGPRFEMKLYMIKLGTLEQENTADVEWRWHPYTRTAKKQKFL 291
>gi|194222088|ref|XP_001915348.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Equus caballus]
Length = 356
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL + P + RG +++ ++ K T ++VVH +
Sbjct: 148 PKIMITTSRDPSSRLKMFAKELKLIFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 207
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P ++ LP GPTA+F L +V+R DI + G + P L+++ F++RLG RV +
Sbjct: 208 RGTPVGFIVSHLPFGPTAYFTLCNVVMRHDIPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 267
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y KT
Sbjct: 268 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------RKTDH 304
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 305 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 353
>gi|50291449|ref|XP_448157.1| hypothetical protein [Candida glabrata CBS 138]
gi|73621058|sp|Q6FNN7.1|IMP4_CANGA RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|49527468|emb|CAG61108.1| unnamed protein product [Candida glabrata]
Length = 288
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 130/253 (51%), Gaps = 29/253 (11%)
Query: 21 DDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
D+E AG D DE+S+ G ++++TT R S+R F E+ + PN+ RG Y
Sbjct: 64 DNEDEAGVD-DEYSA--SSGIVEARVIVTTSRDPSSRLAQFAKEIKLLFPNAVRLNRGNY 120
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP 139
+ ++ KK T +IV+H +R P +L + P GPTA F L +VLR DI N GN
Sbjct: 121 VMADLVSACKKSGTTDLIVLHEHRGVPTSLTVSHFPYGPTAFFSLHNVVLRHDILNRGNQ 180
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFET 199
+ P L+ +NF T LG+RV ++++LFP P+ RV+TF N+ DFI R H Y+
Sbjct: 181 SEVNPHLIFDNFTTPLGNRVVTILKNLFPPGPKKDSSRVITFANRGDFISVRQHVYV--- 237
Query: 200 KESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH 259
+ KD + E GPRF ++L L+ GT + K + EW
Sbjct: 238 -----------RTKDG-----------VEMAEVGPRFEMRLFELRLGTLENKDADVEWQL 275
Query: 260 KPEMDTSRRRFFL 272
+ + T+ R+ +L
Sbjct: 276 RRFVRTANRKDYL 288
>gi|308811002|ref|XP_003082809.1| putative U3 snoRNP protein IMP4 (ISS) [Ostreococcus tauri]
gi|116054687|emb|CAL56764.1| putative U3 snoRNP protein IMP4 (ISS) [Ostreococcus tauri]
Length = 369
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 126/240 (52%), Gaps = 28/240 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE++ + P++L+TT R S+R F EL + P S RG+ L +++ +
Sbjct: 153 DEYAKAAE--SEPRVLLTTSRDPSSRLQQFAKELKLLFPTSQRINRGSQILPDLVDLCRN 210
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVL 148
FT +++VH +R EPD L+I LP GPT +F +S V+R DIK+ G+ + P L+L
Sbjct: 211 GGFTDLVMVHEHRGEPDGLVISHLPFGPTCYFGISNTVMRHDIKDQDLGHVSEVFPHLIL 270
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NF T LG R +++ LFP+ P+ + +RVVTF N D+I RHH Y
Sbjct: 271 ENFTTPLGQRTATVLKHLFPE-PKAKSKRVVTFANDADYISLRHHTY------------- 316
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
+ K AKS L E GPRF ++L ++ GT + + EW +P M + ++
Sbjct: 317 -EMPKGAKS---------VALTEIGPRFEMRLYQIKLGTAEQDDCDIEWSLRPFMRSGKK 366
>gi|84999892|ref|XP_954667.1| u3 small nucleolar ribonucleoprotein protein [Theileria annulata]
gi|65305662|emb|CAI73987.1| u3 small nucleolar ribonucleoprotein protein, putative [Theileria
annulata]
Length = 291
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 22/226 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+LITT R S+R F E +IPNS RG+Y LK ++E+ + KD + +++++
Sbjct: 83 PKVLITTSRNPSSRLTQFAKEFCLIIPNSERLNRGSYILKDLVEFCRSKDVSDMVLIYET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R +P +++I LP GPTA+F+LS +VLR D+ + + P L+ +NF + LG R+
Sbjct: 143 RGKPKSMIITHLPHGPTAYFQLSDVVLRHDLTEKLPTMSQAYPHLMFHNFTSPLGERLKD 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+I+ +FP + R+++F N++D I FRHH + +K A+ +K S
Sbjct: 203 IIRYMFPPA-NTNETRIMSFVNEKDKIVFRHHVW-------------TEKKIGAEDKKIS 248
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
L+E GPRF LK ++ GT D + E EWV +P +T +
Sbjct: 249 -------LKEIGPRFVLKPFKIELGTVDMRDLETEWVLRPYFNTHK 287
>gi|343428302|emb|CBQ71832.1| probable IMP4-component of the U3 small nucleolar ribonucleoprotein
[Sporisorium reilianum SRZ2]
Length = 289
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 132/258 (51%), Gaps = 37/258 (14%)
Query: 21 DDELFAGNDA------DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHY 73
D L A DA DE+S + G P++L+TT R S+R F E+ + PNS
Sbjct: 57 DLNLDAAQDAPSTSIDDEYS---RAGTYDPRVLVTTSRDPSSRLTQFAKEVRLLFPNSTR 113
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG Y + + A+ T +IV+H +R PDA+++ P GPT F L +VLR ++
Sbjct: 114 LNRGGYTVSDLAAAARSNGITDMIVLHEHRGVPDAMVVSHFPHGPTLLFTLHNVVLRHEV 173
Query: 134 KNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 191
H N T P L+ NF ++LG RV ++ LFP P+ +R +++ NQ DFI FR
Sbjct: 174 SAHANSTVSEQYPHLIFENFNSKLGTRVMTALKHLFP-VPKDDSKRTMSWINQNDFISFR 232
Query: 192 HHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
HH ++ KTS ++V +L E GPRF ++ ++ GT D
Sbjct: 233 HHVFV----------------------KTSHREV--QLAEVGPRFEARVYEIKQGTLDQP 268
Query: 252 GGEFEWVHKPEMDTSRRR 269
+ EWV +P M+++++R
Sbjct: 269 DADTEWVLRPYMNSAKKR 286
>gi|443899245|dbj|GAC76576.1| U3 small nucleolar ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 289
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 133/258 (51%), Gaps = 37/258 (14%)
Query: 21 DDELFAGNDA------DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHY 73
D L A DA DE+S + G P++L+TT R S R F E+ + PNS
Sbjct: 57 DLNLDAAQDAPGTSIDDEYS---RAGTYDPRVLVTTSRDPSTRLTQFAKEVRLLFPNSTR 113
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG+Y + + A+ T ++V+H +R PDA+++ P GPT F L +VLR ++
Sbjct: 114 LNRGSYTVADLAAAARANGITDMVVLHEHRGVPDAMVVSHFPHGPTLLFTLHNVVLRHEV 173
Query: 134 KNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 191
H N T P L+ F+++LG RV ++ LFP P+ +RV+TF NQ DFI FR
Sbjct: 174 SAHANSTVSEQYPHLIFEGFSSKLGARVMSALKFLFP-VPKDDSKRVMTFANQNDFIAFR 232
Query: 192 HHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
HH ++ KTS ++V +L E GPRF ++ ++ GT D
Sbjct: 233 HHVFV----------------------KTSHREV--QLAEVGPRFDARVFEIKQGTIDQT 268
Query: 252 GGEFEWVHKPEMDTSRRR 269
+ EWV +P M+++++R
Sbjct: 269 NADTEWVLRPYMNSAKKR 286
>gi|195388596|ref|XP_002052965.1| GJ23618 [Drosophila virilis]
gi|194151051|gb|EDW66485.1| GJ23618 [Drosophila virilis]
Length = 297
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 28/229 (12%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL + PN+ RG Y L +++ + + T I+
Sbjct: 78 GCQDPKIMLTTSHEPSSRLKIFMKELRLIFPNAQQMNRGKYQLNTLMQACRANNVTDFII 137
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD+L+I LP GPTA F ++ + +R DI + G + P L+ +NF + +G R
Sbjct: 138 VHEHRGIPDSLVICHLPFGPTAFFNITDVTMRHDIPDIGTMSEQKPHLIFSNFKSNIGLR 197
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++ LFP P+ + R+++F N D I FRHH+Y + KE K
Sbjct: 198 TVNILKHLFP-VPKEKSERIISFINNEDKISFRHHQYKYINKEIK--------------- 241
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTS 266
L E GPRF LKL ++ GT + K + EWV +P ++T+
Sbjct: 242 ----------LTEIGPRFQLKLYQIKLGTLENIKAVDTEWVSRPYLNTT 280
>gi|154341641|ref|XP_001566772.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134064097|emb|CAM40291.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 288
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 128/242 (52%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE++S ++ P +L+TT R S + F E+ ++PN+ RG+ + +++ A+K
Sbjct: 73 DEYASAGQED--PHVLVTTSRNASQKLLEFAKEVRLIVPNAVRMNRGSLSVHQLMYAARK 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+++T ++V+ ++ PD+L++ LP GPT F + LV R DI G + P L+ N
Sbjct: 131 ENYTDVVVLQESQGVPDSLIVSHLPLGPTVTFTIHNLVARHDIDGVGTMSEQYPHLIFEN 190
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F+T+LG R+ +++ LFP P+ RV+TF N+ DFI RHH +
Sbjct: 191 FSTKLGLRIKDVLRYLFP-VPKADASRVLTFDNENDFISVRHHTF--------------- 234
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K EK +Q L E GPRF L + GT + E EWV +P M+T+++R
Sbjct: 235 -----KKEKGKRQ---VELTEVGPRFELTPYRVVLGTLEMDDAETEWVLQPYMNTAKKRR 286
Query: 271 FL 272
L
Sbjct: 287 LL 288
>gi|145356846|ref|XP_001422635.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582878|gb|ABP00952.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 291
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 28/240 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE++ ++ P++L+TT R S+R F EL + P S RG+ L +++ +
Sbjct: 75 DEYAKAAER--EPRVLLTTSRDPSSRLQQFAKELKLLFPTSQRINRGSQILPDLVDLCRN 132
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVL 148
FT +++VH +R EPD L+I LP GPT +F LS V+R DIK+ G+ + P L+L
Sbjct: 133 GGFTDLVMVHEHRGEPDGLVISHLPFGPTCYFGLSNTVMRHDIKDQDIGHVSEVFPHLIL 192
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NF + LG R +++ LFP+ P+ + +RVVTF N D+I RHH Y
Sbjct: 193 ENFTSPLGKRTATVLKHLFPE-PKAKSKRVVTFANDADYISLRHHMY------------- 238
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
+ K AKS L E GPRF ++L ++ GT + + EW +P M + ++
Sbjct: 239 -EMPKGAKS---------VALTEIGPRFEMRLYQIKLGTVEMDDCDIEWSLRPFMRSGKK 288
>gi|393215490|gb|EJD00981.1| Brix-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 288
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 27/232 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S++ F E+ V PNSH RG Y ++++ E + + T +IV+H +
Sbjct: 82 PKIVITTSRDPSSKLLQFAKEIRLVFPNSHRINRGNYVVRELAEACRANEVTDLIVLHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT + L + LR DI ++ + T P L+ NF+ +LG RV
Sbjct: 142 RGVPDAMIVSHFPHGPTLYLSLHNVQLRHDIASYSSSTVSEQYPHLIFENFSLQLGERVR 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ +RV+TF NQ DFI FRHH ++ KT
Sbjct: 202 DILKYLFP-VPKEDSKRVMTFANQNDFISFRHHVFV----------------------KT 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
S ++V +L E GPRF +K ++ GT + + EWV T+++R +
Sbjct: 239 SHKEV--QLAEVGPRFEMKPYEIRQGTIEQDEADREWVLAHYTRTAKKRRMM 288
>gi|442762987|gb|JAA73652.1| Putative u3 small nucleolar ribonucleoprotein snornp component,
partial [Ixodes ricinus]
Length = 325
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 106/197 (53%), Gaps = 26/197 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ + PN+ RG Y++K++IE + + T IVVH
Sbjct: 83 PKIVVTTSRDPSSKLKQFAKEMRLIFPNAQRMNRGGYEMKQLIEACRANEVTDFIVVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L+I LP GPTA+F + V+R DI N G + P L+ +NF TRLG RV +
Sbjct: 143 RGNPDGLVICHLPYGPTAYFTILNTVMRHDIPNIGTMSEAYPHLIFHNFKTRLGKRVTNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH + E K+ K
Sbjct: 203 LKYLFP-VPKEDSHRVITFANQDDYISFRHHTFKKEGKDYK------------------- 242
Query: 223 QKVITRLQECGPRFTLK 239
LQE GPRF LK
Sbjct: 243 ------LQEVGPRFELK 253
>gi|66357362|ref|XP_625859.1| IMP4 U3 small nucleolar ribonucleoprotein [Cryptosporidium parvum
Iowa II]
gi|46226865|gb|EAK87831.1| IMP4 U3 small nucleolar ribonucleoprotein [Cryptosporidium parvum
Iowa II]
gi|323508683|dbj|BAJ77235.1| cgd4_2740 [Cryptosporidium parvum]
gi|323509709|dbj|BAJ77747.1| cgd4_2740 [Cryptosporidium parvum]
Length = 288
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 117/232 (50%), Gaps = 25/232 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S L PKILITT R S+R F+ EL VIPNS RG Y L + +
Sbjct: 72 DEYS--LSGLYEPKILITTSRSPSSRLLQFVKELNLVIPNSFRINRGGYVLNDFGDLCRS 129
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK-NHGNPTGHIPELVLN 149
T ++VVH +R EPD L+I P GPTA+F +S +VLR D+ + IP L+
Sbjct: 130 NGATDLVVVHEHRGEPDGLIISHFPYGPTAYFAISDVVLRHDLPIKPSTMSQSIPHLIFQ 189
Query: 150 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
NF + LG RV +++ LFP+ +RV++F N D I FRH +
Sbjct: 190 NFNSTLGLRVSNILKHLFPKLKN-ASQRVISFVNINDNIIFRHFSW-------------D 235
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
K D E +L E GPRF LKL ++ GT + K EWVH+P
Sbjct: 236 KDITDKSEE--------IQLNEIGPRFILKLYKIELGTLEMKNLSIEWVHRP 279
>gi|351703158|gb|EHB06077.1| U3 small nucleolar ribonucleoprotein IMP4 [Heterocephalus glaber]
Length = 291
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L+I LP GPTA+F + +V+R DI + G + P L+ + F++ LG RV +
Sbjct: 143 RGTPVGLIISHLPFGPTAYFTICNVVMRHDIPDLGTMSEAKPHLIFHGFSSHLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ + L E GPRF LKL ++ GT + + + EW P +TSR+R FL
Sbjct: 240 RNI--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTSRKRVFL 288
>gi|255718277|ref|XP_002555419.1| KLTH0G08866p [Lachancea thermotolerans]
gi|238936803|emb|CAR24982.1| KLTH0G08866p [Lachancea thermotolerans CBS 6340]
Length = 283
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 35/260 (13%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
D+T+ DDE A + E PK+++TT R S R F E+ + P++
Sbjct: 59 DQTIQETIDDEYSATSGLAE----------PKVIVTTSRDPSTRLSQFAKEIRLLFPSAV 108
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG Y + +++ KK + ++V+H +R P +L I P GPTA+F L +VLR D
Sbjct: 109 RLNRGNYIMPNLVDACKKSGTSDLVVLHEHRGVPTSLTISHFPHGPTAYFTLHNVVLRHD 168
Query: 133 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
I N GN + P L+ +NF T LG RV +++ +FP P+ RV+TF N+ DFI R
Sbjct: 169 ILNAGNQSEVNPHLIFDNFTTPLGQRVVTILKHIFPPGPKKDSPRVITFANRGDFISVRQ 228
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
H Y+ T+E L E GPRF ++L L+ GT D K
Sbjct: 229 HVYV-RTREG------------------------VELAEVGPRFEMRLFELRLGTLDNKE 263
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
+ EW + + T+ R+ +L
Sbjct: 264 ADVEWQLRRFVRTASRKDYL 283
>gi|431892184|gb|ELK02631.1| U3 small nucleolar ribonucleoprotein IMP4 [Pteropus alecto]
Length = 298
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 90 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 149
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P ++ LP GPTA+F L +V+R D+ + G + P L+++ F++RLG RV +
Sbjct: 150 RGTPVGFIVSHLPFGPTAYFTLCNVVMRHDVPDLGTVSEAKPHLIMHGFSSRLGKRVSDI 209
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y KT+
Sbjct: 210 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------RKTNH 246
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+ +R FL
Sbjct: 247 RNV--ELTEVGPRFELKLYMIRQGTLEQEATADVEWRWHPYTNTAHKRVFL 295
>gi|390601333|gb|EIN10727.1| Brix-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 304
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 124/232 (53%), Gaps = 28/232 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ V PNSH RG Y +K++ + + D T ++++H +
Sbjct: 82 PKIIVTTSRDPSSKLLQFAKEMRLVFPNSHRINRGNYVVKELADACRANDVTDLVILHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT +F L + LR DI ++ + T P L+ NF+++LG R+
Sbjct: 142 RGTPDAMIVSHFPHGPTVYFSLHNVTLRHDIASYKSSTVSEQYPHLIFENFSSKLGERIR 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ +RV+TF N+ DFI FRHH ++ N ++
Sbjct: 202 DVLKYLFP-VPKEDSKRVMTFANENDFISFRHHVFV-----------NIPRS-------- 241
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L E GPRF +K ++ GT + K + EWV T+++R L
Sbjct: 242 ------VQLAEVGPRFEMKPYEIRQGTIEQKEADREWVLAHYSRTAKKRRLL 287
>gi|237829973|ref|XP_002364284.1| U3 small nucleolar ribonucleoprotein protein, putative [Toxoplasma
gondii ME49]
gi|211961948|gb|EEA97143.1| U3 small nucleolar ribonucleoprotein protein, putative [Toxoplasma
gondii ME49]
gi|221507152|gb|EEE32756.1| U3 small nucleolar ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 314
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 138/250 (55%), Gaps = 15/250 (6%)
Query: 14 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
+T DD+ +AG + PK+++TT R S+R F+ EL +IPNS
Sbjct: 67 QTTTHIDDEYAYAGVED------------PKVVLTTSRNPSSRLQQFVKELRLLIPNSQR 114
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG Y + ++E + + T +I++H +R +PDA+++ LP GP A+F LS + LR D+
Sbjct: 115 INRGGYVVNDLVELCRSNNVTDLIIIHEHRGQPDAMVVCHLPHGPAAYFNLSGVALRHDL 174
Query: 134 -KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
+ N + P LV +NF +R+G RV +++ L+P + +RV F N D I FRH
Sbjct: 175 PEKPANMSEAAPHLVFHNFTSRVGLRVMNVLKFLYPPANPI-AQRVQAFVNVGDEIHFRH 233
Query: 193 HRYIFETKESKG-SDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
+ + K++ G S+ G + DA+ E++S++K L E GPRFTLK + GT + K
Sbjct: 234 YTWTDNRKKTSGASNTPGSSSADAEEEESSEKKGHLELVEVGPRFTLKPYRIDLGTAEMK 293
Query: 252 GGEFEWVHKP 261
E EW +P
Sbjct: 294 DVETEWAVRP 303
>gi|221487354|gb|EEE25586.1| U3 small nucleolar ribonucleoprotein, putative [Toxoplasma gondii
GT1]
Length = 314
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 138/250 (55%), Gaps = 15/250 (6%)
Query: 14 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
+T DD+ +AG + PK+++TT R S+R F+ EL +IPNS
Sbjct: 67 QTTTHIDDEYAYAGVED------------PKVVLTTSRNPSSRLQQFVKELRLLIPNSQR 114
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG Y + ++E + + T +I++H +R +PDA+++ LP GP A+F LS + LR D+
Sbjct: 115 INRGGYVVNDLVELCRSNNVTDLIIIHEHRGQPDAMVVCHLPHGPAAYFNLSGVALRHDL 174
Query: 134 -KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
+ N + P LV +NF +R+G RV +++ L+P + +RV F N D I FRH
Sbjct: 175 PEKPANMSEAAPHLVFHNFTSRVGLRVMNVLKFLYPPANPI-AQRVQAFVNVGDEIHFRH 233
Query: 193 HRYIFETKESKG-SDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
+ + K++ G S+ G + DA+ E++S++K L E GPRFTLK + GT + K
Sbjct: 234 YTWTDNRKKTSGASNTPGSSSADAEEEESSEKKGHLELVEVGPRFTLKPYRIDLGTAEMK 293
Query: 252 GGEFEWVHKP 261
E EW +P
Sbjct: 294 DVETEWAVRP 303
>gi|296005227|ref|XP_002808945.1| nucleolar preribosomal assembly protein, putative [Plasmodium
falciparum 3D7]
gi|225631831|emb|CAX64226.1| nucleolar preribosomal assembly protein, putative [Plasmodium
falciparum 3D7]
Length = 328
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 26/272 (9%)
Query: 3 PRTIENTREPDETVCRPDDDE-LFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIE D+ ++++ L N DEFS K P I+IT+ + S F+
Sbjct: 81 PKTIERLSIFDDNKISLENEKFLLNENCIDEFSDYFKNQKEPNIIITSIKRPSKNTILFM 140
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPTA 120
EL P+ Y R ++ ++ + + F++ I++ P + I LP+GPTA
Sbjct: 141 KELSLTFPHIFYEPRLDNSIEYLLNNSIQNQFSTFILIEEGIDHHPKNMFICTLPNGPTA 200
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+ LS + K++ T PE+ + NF T +G R+ R + +L P PE++ ++VV
Sbjct: 201 KYSLSNIFYAHKQKSNIEITTLAPEVYITNFNTFIGERIKRQLHTLVPFKPEYKSQKVVV 260
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
F+NQRDFIFFRH++Y F K+ L E GP FTL+L
Sbjct: 261 FYNQRDFIFFRHYKYNFVDKKK------------------------CNLSEIGPGFTLQL 296
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+SL+ G + K +E+V +P+M +R++ +L
Sbjct: 297 LSLKDGLINDKEKMYEFVIRPDMKVNRKKMYL 328
>gi|72390209|ref|XP_845399.1| U3 small nuclear ribonucleoprotein (snRNP) [Trypanosoma brucei
TREU927]
gi|62360569|gb|AAX80981.1| U3 small nuclear ribonucleoprotein (snRNP), putative [Trypanosoma
brucei]
gi|70801934|gb|AAZ11840.1| U3 small nuclear ribonucleoprotein (snRNP), putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|261328799|emb|CBH11777.1| U3 small nuclear ribonucleoprotein (snRNP),putative [Trypanosoma
brucei gambiense DAL972]
Length = 287
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 132/256 (51%), Gaps = 31/256 (12%)
Query: 20 DDDE--LFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKR 76
DDD+ + DE++ K G P +L+TT R S + F E+ +IPN+ R
Sbjct: 60 DDDQTKVLQTTVDDEYA---KAGVEDPHVLVTTSREPSQKLLEFAKEVRLIIPNAVRLNR 116
Query: 77 GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH 136
G ++++++E A++ ++ ++V+ ++ PD+L I LP GPT F + LV R DI++
Sbjct: 117 GNLNIRQLMEAARRDQYSDVVVLQESQGVPDSLTISHLPLGPTVVFTIHNLVTRHDIEDV 176
Query: 137 GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYI 196
G + P L+ NF T+LG R+ +++ LFP P+ RV+TF NQ DFI FRHH +
Sbjct: 177 GTMSEQYPHLIFENFTTKLGCRIRDVLKYLFP-VPKPEATRVLTFDNQNDFISFRHHTF- 234
Query: 197 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 256
K K S+ +L E GPR L + GT + E E
Sbjct: 235 ---KMVKKSNV--------------------QLTEVGPRMELSPCRIMLGTLEMDDAETE 271
Query: 257 WVHKPEMDTSRRRFFL 272
WV +P M+T+++R +
Sbjct: 272 WVLQPYMNTAKKRRLM 287
>gi|196004102|ref|XP_002111918.1| hypothetical protein TRIADDRAFT_55417 [Trichoplax adhaerens]
gi|190585817|gb|EDV25885.1| hypothetical protein TRIADDRAFT_55417 [Trichoplax adhaerens]
Length = 304
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 143/279 (51%), Gaps = 53/279 (18%)
Query: 8 NTREPDETVCRPDDDELFAG-NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 66
+ R D+ + DD+ +AG ND P I+ITT S++ F E+
Sbjct: 60 DDRNTDKYIEDRDDEYKWAGVND-------------PSIMITTSHEPSSKLKQFAKEMKL 106
Query: 67 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 126
+ PN RG + L ++I+ + + T +I+VH +R +PD +++ LP GPTA+F LS
Sbjct: 107 IFPNCQRMNRGNHVLSELIQACRANNVTDLIIVHEHRGQPDGMIVSHLPYGPTAYFTLSN 166
Query: 127 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 186
+V+R DI+N G + P L+ + F+++LG RV +++ LFP P+ RR++TF N D
Sbjct: 167 VVMRHDIENIGPMSEAYPHLIFHKFSSKLGLRVKNILRYLFP-VPKESTRRIITFANDDD 225
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLV----- 241
FI FRHH Y K ++G+ L E GPRF +KL+
Sbjct: 226 FISFRHHVY----KRAEGN---------------------IELMEVGPRFEMKLLNNCAF 260
Query: 242 -------SLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+++ GT D + + EW +P ++T+++R +L
Sbjct: 261 LGFFIVFAIRLGTIDEENTADVEWKIRPYLNTAKKRKWL 299
>gi|395546312|ref|XP_003775033.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Sarcophilus harrisii]
Length = 346
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 118/231 (51%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I+ITT R S+R F EL + P + RG +++ ++ K T +++VH +
Sbjct: 139 PRIMITTSRDPSSRLKMFAKELKLIFPGAQKMNRGRHEMGALVRACKANGVTDLLLVHEH 198
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R D+ + G P L+ + F++RLG RV +
Sbjct: 199 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDVPDLGTAPQAFPHLIFHGFSSRLGQRVSDI 258
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ DFI FRHH Y K
Sbjct: 259 LRYLFP-VPKDESRRVITFANQDDFISFRHHVY----------------------RKPDH 295
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
V L E GPRF +KL ++ GT + + + EW P T+R+R FL
Sbjct: 296 HTV--ELTEVGPRFEMKLYMIRLGTLEQEATADVEWRWHPYTHTARKRTFL 344
>gi|392578604|gb|EIW71732.1| hypothetical protein TREMEDRAFT_67933 [Tremella mesenterica DSM
1558]
Length = 288
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 27/232 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL + PNS RG +++ + T +I++H +
Sbjct: 82 PKIVITTSRSPSSRLLQFSKELRLIFPNSFRLNRGNTTSPSLVQACLSQGMTDLIIIHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDAL+I LP GPT L + LR D+ +H T P L+ F+T+LG RV
Sbjct: 142 RGVPDALIISHLPHGPTISMTLHNVTLRHDVSSHSESTVSEQYPHLIFEGFSTKLGERVK 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
++++LFP P+ +RV++F N++DFI FRHH + KT
Sbjct: 202 GILKALFP-VPKEDAKRVMSFVNEKDFISFRHHVF----------------------AKT 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
S + V +L E GPRF K ++ GT D + + EW+ +P + T+++R L
Sbjct: 239 SHKDV--QLAEVGPRFEAKPYEIRQGTLDQREADVEWLLRPYLRTAKKRHQL 288
>gi|395328924|gb|EJF61314.1| Brix-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 312
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 27/232 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ V PNSH RG Y +K++ E + D T ++++H +
Sbjct: 82 PKIVVTTSRDPSSKLLQFAKEMRLVFPNSHRINRGNYVVKELAEACRTNDVTDLVILHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT +F L + LR DI ++ + T P L+ NF+++LG R+
Sbjct: 142 RGVPDAMIVSHFPHGPTVYFTLHNVQLRHDIASYKSSTVSEQYPHLIFENFSSKLGERIR 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ +RV+TF N+ DFI FRHH ++ K
Sbjct: 202 DVLKYLFP-VPKEDSKRVMTFSNEDDFISFRHHVFM----------------------KI 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++V +L E GPRF +K ++ GT + E EWV T+++R L
Sbjct: 239 PPRQV--QLAEVGPRFEMKPYEIRQGTIEQTEAEREWVLAHYSRTAKKRSLL 288
>gi|67614595|ref|XP_667381.1| U3 snoRNP protein IMP4 [Cryptosporidium hominis TU502]
gi|54658515|gb|EAL37153.1| U3 snoRNP protein IMP4 [Cryptosporidium hominis]
Length = 288
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 118/232 (50%), Gaps = 25/232 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S L PKILITT R S+R F+ EL VIPNS RG Y L + +
Sbjct: 72 DEYS--LSGLYEPKILITTSRSPSSRLLQFVKELNLVIPNSFRINRGGYVLNDFGDLCRS 129
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGH-IPELVLN 149
T ++VVH +R EPD L+I P GPTA+F +S +VLR D+ + IP L+
Sbjct: 130 NGATDLVVVHEHRGEPDGLIISHFPHGPTAYFAISDVVLRHDLSIKPSAMSQSIPHLIFQ 189
Query: 150 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
NF + LG RV +++ LFP+ +RV++F N D I FRH +
Sbjct: 190 NFNSTLGLRVSDILKHLFPKLKN-TSQRVISFVNVNDNIIFRHFSW-------------- 234
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
K KSE+ +L E GPRF L+L ++ GT + K EW H+P
Sbjct: 235 DKDMTDKSEE-------IQLNEIGPRFILRLYKIELGTLEMKNLSIEWAHRP 279
>gi|240973534|ref|XP_002401491.1| U3 small nucleolar ribonucleoprotein imp4, putative [Ixodes
scapularis]
gi|215491032|gb|EEC00673.1| U3 small nucleolar ribonucleoprotein imp4, putative [Ixodes
scapularis]
Length = 317
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 106/198 (53%), Gaps = 26/198 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ + PN+ RG Y++K++IE + + T IVVH
Sbjct: 83 PKIVVTTSRDPSSKLKQFAKEMRLIFPNAQRMNRGGYEMKQLIEACRANEVTDFIVVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L+I LP GPTA+F + V+R DI N G + P L+ +NF TRLG RV +
Sbjct: 143 RGNPDGLVICHLPYGPTAYFTILNTVMRHDIPNIGTMSEAYPHLIFHNFKTRLGKRVTNI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH + E K+ K
Sbjct: 203 LKYLFP-VPKEDSHRVITFANQDDYISFRHHTFKNEGKDYK------------------- 242
Query: 223 QKVITRLQECGPRFTLKL 240
LQE GPRF L +
Sbjct: 243 ------LQEVGPRFELNV 254
>gi|219121362|ref|XP_002185906.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582755|gb|ACI65376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 296
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 118/231 (51%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I +TT R S+R F E+ + PNS RG + +++E ++ +F+ +++V
Sbjct: 91 PRICVTTSRSPSSRLKQFAKEIKLLFPNSTRINRGNNRVDELMESCRQSEFSDVVIVQET 150
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 161
R EPD L+I LP GPTA F LS V+R D+ P P ++LN F + LG R G
Sbjct: 151 RGEPDGLVICHLPLGPTAFFSLSNAVMRHDLNPPAAPMSEAYPHILLNGFNSELGKRAGN 210
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFP P +RVVTF N+ DFI FRHH Y SK S N
Sbjct: 211 ILKCLFP-VPRADSKRVVTFSNENDFISFRHHMY------SKISHDN------------- 250
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF ++L ++ GT + K + E+ + +TS +R L
Sbjct: 251 -----VALHEVGPRFEMRLYQIRLGTLEQKEADNEYTLRSFQNTSAKRQVL 296
>gi|390342557|ref|XP_797223.3| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Strongylocentrotus purpuratus]
Length = 206
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 113/210 (53%), Gaps = 26/210 (12%)
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ EL ++PN+ RG Y++ ++++ + D T +I+VH +R PDAL I LP GPTA
Sbjct: 16 LCELKLILPNAQRLNRGNYEISQLVQACRANDVTDLIMVHEHRGVPDALQICHLPYGPTA 75
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
F L VLR DI G + P L+ NNF ++LG RV +++ LFP P+ +RV+T
Sbjct: 76 FFTLFNPVLRHDIPKIGTMSEAYPHLIFNNFKSKLGERVMSILKYLFP-VPKPYSKRVIT 134
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
F N D I FRHH Y K D K+ L E GPRF +KL
Sbjct: 135 FANDDDSISFRHHTY---------------KKVDHKN---------VDLIEVGPRFEMKL 170
Query: 241 VSLQHGTFD-TKGGEFEWVHKPEMDTSRRR 269
++ GT D + E EWV +P M+T+++R
Sbjct: 171 YEIRLGTIDQSNTAEVEWVSRPYMNTAKKR 200
>gi|389747395|gb|EIM88574.1| Brix-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 315
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 27/232 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ V PNSH RG Y +K++ E + + T +IV+H +
Sbjct: 82 PKIVVTTSRDPSSKLLQFSKEMRLVFPNSHRINRGNYVVKELAEACRANEVTDLIVLHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT +F L + LR DI N+ + T P L+ NF+++LG R+
Sbjct: 142 RGVPDAMIVSHFPHGPTVYFTLHNVNLRHDIPNYNSSTVSEQYPHLIFENFSSKLGERMR 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
++ LFP P+ +R++TF N DFI FRHH ++ K
Sbjct: 202 DCLKYLFP-VPKEDSKRIMTFSNDNDFISFRHHVFL----------------------KI 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++V +L E GPRF +K ++ GT + E EWV T+++R L
Sbjct: 239 PPKQV--QLAEVGPRFEMKPYEIRQGTIEQSEAEREWVLSTYSRTAKKRSLL 288
>gi|156097436|ref|XP_001614751.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803625|gb|EDL45024.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 328
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 139/273 (50%), Gaps = 28/273 (10%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGND--ADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PR+IE DE +++E F N+ DEFS KQ P I+IT+ + S F
Sbjct: 81 PRSIERLAIFDENKIN-EENEKFLLNEKCIDEFSDYFKQRKEPNIVITSIKRPSKNTILF 139
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPT 119
+ EL P+ Y R + ++ ++ + + +F++ I++ + P + I LP+GPT
Sbjct: 140 MKELSLTFPHIFYEPRLDHSIEFLMSNSVQNNFSTFILIEEGIDKHPKYMFISTLPNGPT 199
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
A + L+ ++ K T PE+ + NF T +G R+ R + +L P P ++ ++VV
Sbjct: 200 AKYSLTNVLYAHKKKTDIEITTLPPEVYITNFNTFIGERIKRQLHTLVPFKPAYKSQKVV 259
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
F+NQRDFIFFRH +Y F N KK L E GP FTL+
Sbjct: 260 VFYNQRDFIFFRHFKYNF---------LNKKKC---------------TLNEIGPAFTLQ 295
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L+SL+ G + K +E+V +P+M +R++ +L
Sbjct: 296 LLSLKDGLINDKEKMYEFVLRPDMKVNRKKMYL 328
>gi|195446437|ref|XP_002070780.1| GK12239 [Drosophila willistoni]
gi|194166865|gb|EDW81766.1| GK12239 [Drosophila willistoni]
Length = 306
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 114/220 (51%), Gaps = 28/220 (12%)
Query: 40 GCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIV 98
GC PKI++TT S+R F+ EL + PN+ RG Y L ++ + + T I+
Sbjct: 77 GCEDPKIMLTTSHDPSSRLKIFMKELRLIFPNAQQMNRGKYKLSTLMHACRANNVTDFII 136
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHR 158
VH +R PD L++ LP GPTA F +S +V+R DI + G + P L+ NNF + +G R
Sbjct: 137 VHEHRGVPDGLVVCHLPYGPTAFFNISDVVMRHDIPDIGKMSEQKPHLIFNNFKSTIGLR 196
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
++++ LFP P+ +RV+TF N D I FRHH+Y + +E
Sbjct: 197 TVQILKHLFP-VPKENSQRVITFLNHNDSIIFRHHQYKYVNRE----------------- 238
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEW 257
L+E GPRF LKL ++ GT + K + EW
Sbjct: 239 --------LELKEVGPRFQLKLYQIKLGTLENIKAADSEW 270
>gi|344290030|ref|XP_003416742.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Loxodonta africana]
Length = 342
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 134 PKIMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 193
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P LV++ F++ LG RV +
Sbjct: 194 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLVMHGFSSHLGKRVSDI 253
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ R++TF N+ D+I FRHH Y K DA++
Sbjct: 254 LRYLFP-VPKDDSHRIITFANKDDYISFRHHIY---------------KKMDARN----- 292
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT + + + EW P +T+ +R FL
Sbjct: 293 ----VELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 339
>gi|342181505|emb|CCC90984.1| putative U3 small nuclear ribonucleoprotein (snRNP) [Trypanosoma
congolense IL3000]
Length = 287
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 39/260 (15%)
Query: 20 DDDEL--FAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKR 76
DDD+ DE++ K G P++L+TT R S + F E+ V+PN+ R
Sbjct: 60 DDDQTKSLVTTVDDEYA---KAGVEDPRVLVTTSREPSQKLLEFAKEVRLVVPNAVRMNR 116
Query: 77 GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH 136
G ++++++E A++ F+ ++V+ ++ PD+L + LP GPT F + LV R DI++
Sbjct: 117 GGLNIRQLMEAARRDQFSDVVVLQESKGVPDSLTVSHLPLGPTVVFTIHNLVTRHDIEDV 176
Query: 137 GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYI 196
G + P L+ NF T+LG R+ +++ LFP P+ RV+TF NQ DFI FRHH +
Sbjct: 177 GTMSEQYPHLIFENFTTKLGCRIRDVLKYLFP-VPKPESTRVLTFDNQNDFISFRHHTF- 234
Query: 197 FETKESKGSDANGKKAKDAKSEKTSQQKVITR----LQECGPRFTLKLVSLQHGTFDTKG 252
KV+ R L E GPR L + GT +
Sbjct: 235 ---------------------------KVVKRGNVQLTEVGPRMELMPCRVMLGTLEMDD 267
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
E EWV +P M+T+++R +
Sbjct: 268 AETEWVLQPYMNTAKKRRLM 287
>gi|324513461|gb|ADY45531.1| Brix domain-containing protein [Ascaris suum]
Length = 193
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 26/207 (12%)
Query: 67 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 126
+ PN+ RG YD++K+++ + D T I++H R PD L++ LP GPTA+F LS
Sbjct: 4 MFPNAQAINRGHYDVRKLVQACRANDVTDFILIHETRGSPDGLIVCHLPFGPTAYFNLSN 63
Query: 127 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 186
+V+R D+ + P L+ NN +RLG R+ +++ LFP P+ RR++TF N+ D
Sbjct: 64 VVMRHDVPGRKTISEVYPHLIFNNMNSRLGQRITSILKYLFP-VPKPESRRIITFSNEED 122
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
F+ FRHH Y SKG L E GPRF ++ ++ G
Sbjct: 123 FVSFRHHTY------SKGESGE------------------IELTEVGPRFEMRPYCIKLG 158
Query: 247 TFDT-KGGEFEWVHKPEMDTSRRRFFL 272
T + E EWV +P M+T+ +R L
Sbjct: 159 TLENIDAAETEWVLRPYMNTAAKRQLL 185
>gi|332814371|ref|XP_003309288.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Pan
troglodytes]
Length = 291
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------QKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW +++R+R FL
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHSYTNSARKRVFL 288
>gi|195107106|ref|XP_001998157.1| GI16926 [Drosophila mojavensis]
gi|193914751|gb|EDW13618.1| GI16926 [Drosophila mojavensis]
Length = 218
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT S+R F+ EL + PN+ RG Y LK ++ + + T I+VH +
Sbjct: 2 PKIMLTTSHEPSSRLKMFMKELRLIFPNAQQMNRGKYQLKTLMHACRANNVTDFILVHEH 61
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD+L+I LP GPTA F ++ + +R DI N G + P L+ +NF + +G R ++
Sbjct: 62 RGIPDSLVICHLPFGPTAFFNITDVTMRHDIPNLGPMSEQKPHLIFSNFKSNIGLRTVQI 121
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ + R+++F N D I FRHH+Y + E
Sbjct: 122 LKHLFP-VPKDKSERIISFINNEDKISFRHHQYKYVNNE--------------------- 159
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTS 266
L E GPRF LKL ++ GT + K + EWV +P ++TS
Sbjct: 160 ----IELTEVGPRFQLKLYQIKLGTLENIKAVDTEWVSRPYLNTS 200
>gi|321258817|ref|XP_003194129.1| rRNA primary transcript binding protein [Cryptococcus gattii WM276]
gi|317460600|gb|ADV22342.1| rRNA primary transcript binding protein, putative [Cryptococcus
gattii WM276]
Length = 288
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 119/228 (52%), Gaps = 26/228 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V PNS+ RG +K ++ + + ++VVH +
Sbjct: 83 PKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTVIKDLVSACNAQGVSDLVVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R PDAL++ LP GPT L + LR D+ N + P L+ + F+T+LG RV
Sbjct: 143 RGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTVSEQYPHLIFDGFSTKLGERVTG 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
++++LFP P+ +RV+TF N+ DFI FRHH + KT
Sbjct: 203 ILKALFP-VPKEDAKRVMTFKNENDFISFRHHVFA----------------------KTG 239
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
+ V +L E GPRF K ++ GT D + EW+ +P + T+++R
Sbjct: 240 HKDV--QLAEVGPRFEAKPFEIRQGTVDQTEADVEWLLRPYLRTAKKR 285
>gi|37654250|gb|AAQ96230.1| LRRGT00017 [Rattus norvegicus]
Length = 391
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 120/229 (52%), Gaps = 26/229 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRF 270
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R
Sbjct: 240 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRL 286
>gi|159480566|ref|XP_001698353.1| hypothetical protein CHLREDRAFT_127225 [Chlamydomonas reinhardtii]
gi|158282093|gb|EDP07846.1| predicted protein [Chlamydomonas reinhardtii]
Length = 286
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 31/229 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+L+TT R S+R F E+ VIPNS RG LK+++ FTS+ +
Sbjct: 83 PKVLVTTSRDPSSRLTQFAKEMKLVIPNSQRINRGGLILKELVRTRAVCVFTSV----EH 138
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRLGHRV 159
R EPD +++ LP GPTA+F + VLR DI K G + P LVL+N ++LG R
Sbjct: 139 RGEPDGMVVCHLPYGPTAYFGIFNTVLRHDIGQKKEVGTISEAYPHLVLDNLGSKLGART 198
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ +R+VTF N++D+I FRHH Y + KG+ +
Sbjct: 199 ANILKHLFP-VPKDDAKRIVTFSNRQDYISFRHHTY----AQPKGASS------------ 241
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
L ECGPRF LKL ++ GT D E EWV + ++R
Sbjct: 242 -------IELTECGPRFELKLYQIKLGTLDQSHAENEWVLRAYTRNTKR 283
>gi|367002656|ref|XP_003686062.1| hypothetical protein TPHA_0F01440 [Tetrapisispora phaffii CBS 4417]
gi|357524362|emb|CCE63628.1| hypothetical protein TPHA_0F01440 [Tetrapisispora phaffii CBS 4417]
Length = 290
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 123/245 (50%), Gaps = 25/245 (10%)
Query: 28 NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEY 87
+D D+ S P++++TT R S R F E+ + PN+ RG Y + ++
Sbjct: 71 DDIDDEYSETSGIVEPRLIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNYIMPNLVGA 130
Query: 88 AKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELV 147
K + ++V+H +R P +L I P GPTA F L +VLR DI NHGN + P L+
Sbjct: 131 CIKSGTSDLVVLHEHRGVPTSLTISHFPHGPTAFFTLHNVVLRHDILNHGNQSEVNPHLI 190
Query: 148 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDA 207
+NF T LG RV ++++ LF SP+ RV+TF N+ DFI R H Y+ +T+E
Sbjct: 191 FDNFTTPLGERVVKVLKHLFSPSPKKDSPRVITFANRGDFISVRQHVYV-KTREG----- 244
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
+ E GPRF +KL L+ GT D K + EW + + T+
Sbjct: 245 -------------------VEMAEVGPRFEMKLFELRLGTLDNKDADVEWKLRRFIRTAG 285
Query: 268 RRFFL 272
R+ +L
Sbjct: 286 RKDYL 290
>gi|167388707|ref|XP_001738664.1| brix domain-containing protein ZK795.3 [Entamoeba dispar SAW760]
gi|167389361|ref|XP_001738928.1| brix domain-containing protein ZK795.3 [Entamoeba dispar SAW760]
gi|165897595|gb|EDR24693.1| brix domain-containing protein ZK795.3, putative [Entamoeba dispar
SAW760]
gi|165897974|gb|EDR24984.1| brix domain-containing protein ZK795.3, putative [Entamoeba dispar
SAW760]
Length = 286
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 82 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD ++I P GPTA+F L +V R + K + P L+ +N T LG R +
Sbjct: 142 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETKTSKTFSEVYPHLIFDNLTTPLGKRFEMI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I FRHH Y + Q
Sbjct: 202 LKYLFP-VPKSDSKRVMTFSNSSDYITFRHHAYDY----------------------NEQ 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+++ LQE GPRF L+ ++ GT D E EW+ + ++++ R L
Sbjct: 239 HQLV--LQEIGPRFDLRPYQIKLGTIDMDYAENEWILRSFINSATTRKLL 286
>gi|119576018|gb|EAW55614.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast),
isoform CRA_b [Homo sapiens]
Length = 315
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 123/233 (52%), Gaps = 28/233 (12%)
Query: 43 PKILITTCRFNSNRGPAF--ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 100
PK++ITT R S+R F + EL V P + RG +++ ++ K T ++VVH
Sbjct: 105 PKVMITTSRDPSSRLKMFAKVLELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVH 164
Query: 101 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVG 160
+R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV
Sbjct: 165 EHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVS 224
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 225 DILRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKT 261
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 262 DHRNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 312
>gi|444522019|gb|ELV13270.1| U3 small nucleolar ribonucleoprotein IMP4 [Tupaia chinensis]
Length = 311
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 103 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 162
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 163 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 222
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 223 LRYLFP-VPKDDSHRVITFANQDDYISFRHHIY----------------------KKTDH 259
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LK ++ GT + + + EW P +T+R++ FL
Sbjct: 260 RNV--ELTEVGPRFELKPYMIRLGTLEQEATADVEWRWHPYTNTARKKVFL 308
>gi|134111703|ref|XP_775387.1| hypothetical protein CNBE1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258046|gb|EAL20740.1| hypothetical protein CNBE1030 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 312
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 120/228 (52%), Gaps = 26/228 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V PNS+ RG +K ++ + T ++VVH +
Sbjct: 107 PKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTVVKDLVSACNAQGVTDLVVVHEH 166
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R PDAL++ LP GPT L + LR D+ N + P L+ + F+T+LG RV
Sbjct: 167 RGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTVSEQYPHLIFDGFSTKLGERVTG 226
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
++++LFP P+ +RV+TF N+ DFI FRHH + AN T
Sbjct: 227 ILKALFP-VPKDDAKRVMTFKNENDFISFRHHVF-----------AN-----------TG 263
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
+ V +L E GPRF K ++ GT D + EW+ +P + T+++R
Sbjct: 264 HKDV--QLAEVGPRFEAKPFEIRQGTVDQTEADVEWLLRPYLRTAKKR 309
>gi|405120614|gb|AFR95384.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 288
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 120/228 (52%), Gaps = 26/228 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V PNS+ RG +K ++ + T ++VVH +
Sbjct: 83 PKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTVIKDLVSACNAQGVTDLVVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R PDAL++ LP GPT L + LR D+ N + P L+ + F+T+LG RV
Sbjct: 143 RGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTVSEQYPHLIFDGFSTKLGERVTG 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
++++LFP P+ +RV+TF N+ DFI FRHH + AN T
Sbjct: 203 ILKALFP-VPKDDAKRVMTFKNENDFISFRHHVF-----------AN-----------TG 239
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
+ V +L E GPRF K ++ GT D + EW+ +P + T+++R
Sbjct: 240 HKDV--QLAEVGPRFEAKPFEIRQGTVDQTEADVEWLLRPYLRTAKKR 285
>gi|58268148|ref|XP_571230.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|57227464|gb|AAW43923.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 288
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 120/228 (52%), Gaps = 26/228 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F EL V PNS+ RG +K ++ + T ++VVH +
Sbjct: 83 PKIVITTSRSPSSRLLQFSKELRLVFPNSYRLNRGNTVVKDLVSACNAQGVTDLVVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R PDAL++ LP GPT L + LR D+ N + P L+ + F+T+LG RV
Sbjct: 143 RGVPDALIVSHLPHGPTLSMTLHNVTLRHDVSSNSSTVSEQYPHLIFDGFSTKLGERVTG 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
++++LFP P+ +RV+TF N+ DFI FRHH + AN T
Sbjct: 203 ILKALFP-VPKDDAKRVMTFKNENDFISFRHHVF-----------AN-----------TG 239
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
+ V +L E GPRF K ++ GT D + EW+ +P + T+++R
Sbjct: 240 HKDV--QLAEVGPRFEAKPFEIRQGTVDQTEADVEWLLRPYLRTAKKR 285
>gi|334350400|ref|XP_001371477.2| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Monodelphis domestica]
Length = 359
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 121/231 (52%), Gaps = 26/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I+ITT R S+R F EL + P + RG +++ +++ K T +++VH +
Sbjct: 152 PRIMITTSRDPSSRLKMFAKELKLIFPGAQKMNRGRHEMGALVQACKANGVTDLLMVHEH 211
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R D+ + G + P L+ + F++RLG RV +
Sbjct: 212 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDVPDLGTASEAFPHLIFHGFSSRLGQRVSNI 271
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF N+ D+I FRHH Y + S
Sbjct: 272 LRYLFP-VPKDDSHRVITFANKDDYISFRHHVY-----------------------RKSD 307
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ + L E GPRF +KL ++ GT + + + EW P T+R+R FL
Sbjct: 308 HRTV-ELTEVGPRFEMKLYMIRLGTLEHEATADVEWRWHPYTHTARKRTFL 357
>gi|392568093|gb|EIW61267.1| Brix-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 316
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 27/232 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F E+ V PNSH RG Y +K++ E + D + ++V+H +
Sbjct: 82 PKIVVTTSRDPSSKLIQFAKEMRLVFPNSHRINRGNYVVKELAEACRANDVSDLVVLHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT +F L + LR DI ++ + T P L+ NF+++LG R+
Sbjct: 142 RGVPDAMIVSHFPHGPTVYFTLHNVQLRHDIASYKSSTVSEQYPHLIFENFSSKLGERIQ 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ +RV+TF + DFI FRHH ++ K
Sbjct: 202 DVLKYLFP-VPKEDSKRVMTFSTEDDFISFRHHVFM----------------------KI 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+++ +L E GPRF +K ++ GT + E EWV T+++R L
Sbjct: 239 PPKQI--QLAEVGPRFEMKPYEIRQGTIEQTEAEREWVLAHYSRTAKKRSLL 288
>gi|353234298|emb|CCA66324.1| probable IMP4-component of the U3 small nucleolar ribonucleoprotein
[Piriformospora indica DSM 11827]
Length = 288
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 118/232 (50%), Gaps = 27/232 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S++ F E+ V PNSH RG Y +K++ E + + T +I++H
Sbjct: 82 PKIVITTSRDPSSKLLQFAKEMRLVFPNSHRINRGNYVVKELAEACRANEVTDLIILHET 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDAL++ P GPT F L + LR D+ N N T P L+ F T+LG R+
Sbjct: 142 RGVPDALIVSHFPHGPTVFFTLHSVSLRHDLPNSSNSTVSEQYPHLIFEAFETKLGTRIR 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ RV++F N+ DFI FRHH + AK K E
Sbjct: 202 DVLKYLFP-VPKEDATRVMSFINESDFISFRHHVF----------------AKTGKKE-- 242
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L E GPRF +K ++ GT + + + EWV T+R+R L
Sbjct: 243 ------VQLAEVGPRFEMKPYEIRLGTIEQEEADKEWVLAHYTRTARKRRML 288
>gi|67476612|ref|XP_653870.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Entamoeba
histolytica HM-1:IMSS]
gi|56470867|gb|EAL48483.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Entamoeba histolytica HM-1:IMSS]
Length = 273
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 69 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 128
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD ++I P GPTA+F L +V R + K + P L+ +N T LG R +
Sbjct: 129 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETKTSKTFSEVYPHLIFDNLTTPLGKRFEMI 188
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I FRHH Y + +
Sbjct: 189 LKYLFP-VPKSDSKRVMTFSNSSDYITFRHHAYDY----------------------NEE 225
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+++ LQE GPRF L+ ++ GT D E EW+ + ++++ R L
Sbjct: 226 HQLV--LQEIGPRFDLRPYQIKLGTIDMDYAENEWILRSFINSASTRKLL 273
>gi|71424770|ref|XP_812905.1| U3 small nuclear ribonucloprotein (snRNP) [Trypanosoma cruzi strain
CL Brener]
gi|70877738|gb|EAN91054.1| U3 small nuclear ribonucloprotein (snRNP), putative [Trypanosoma
cruzi]
gi|407852080|gb|EKG05738.1| ribosome biogenesis protein, putative [Trypanosoma cruzi]
Length = 287
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 121/230 (52%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++L+TT R S + F E+ VIP++ RG ++++++ A++ ++ ++V+ +
Sbjct: 83 PRVLVTTSREPSQKLLEFAKEIRLVIPSAVRMNRGNLSVRQLMDAARRGQYSDVVVLQES 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
+ PD+L + LP GPT F + LV R DI++ G + P L+ NF TRLG RV +
Sbjct: 143 QGVPDSLTVSHLPLGPTVVFTIHNLVTRHDIQDVGTMSEQHPHLIFENFTTRLGRRVRDV 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ DF+ FRHH + + KG +
Sbjct: 203 LKFLFP-VPKPDATRVLTFDNQNDFVSFRHHTF----RAVKGREV--------------- 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L E GPR L + GT + E EWV +P M+T+++R L
Sbjct: 243 -----QLTEVGPRMELAPYRITLGTLEMDDAETEWVLQPYMNTAKKRRLL 287
>gi|407042694|gb|EKE41482.1| U3 small nucleolar ribonucleoprotein IMP4, putative, partial
[Entamoeba nuttalli P19]
Length = 281
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 77 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 136
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R EPD ++I P GPTA+F L +V R + K + P L+ +N T LG R +
Sbjct: 137 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETKTSKTFSEVYPHLIFDNLTTPLGKRFEMI 196
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I FRHH Y + +
Sbjct: 197 LKYLFP-VPKSDSKRVMTFSNSSDYITFRHHAYDY----------------------NEE 233
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+++ LQE GPRF L+ ++ GT D E EW+ + ++++ R L
Sbjct: 234 HQLV--LQEIGPRFDLRPYQIKLGTIDMDYAENEWILRSFINSAATRKLL 281
>gi|71406162|ref|XP_805640.1| U3 small nuclear ribonucloprotein (snRNP) [Trypanosoma cruzi strain
CL Brener]
gi|70869129|gb|EAN83789.1| U3 small nuclear ribonucloprotein (snRNP), putative [Trypanosoma
cruzi]
Length = 287
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 121/230 (52%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++L+TT R S + F E+ VIP++ RG ++++++ A++ ++ ++V+ +
Sbjct: 83 PRVLVTTSREPSQKLLEFAKEIRLVIPSAVRMNRGNLSVRQLMDAARRGQYSDVVVLQES 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
+ PD+L + LP GPT F + LV R DI++ G + P L+ NF TRLG RV +
Sbjct: 143 QGVPDSLTVSHLPLGPTVVFTIHNLVTRHDIQDVGTMSEQHPHLIFENFTTRLGRRVRDV 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ DF+ FRHH + + KG +
Sbjct: 203 LKFLFP-VPKPDATRVLTFDNQNDFVSFRHHTF----RAVKGREV--------------- 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L E GPR L + GT + E EWV +P M+T+++R L
Sbjct: 243 -----QLTEVGPRMELAPYRITLGTLEMDDAETEWVLQPYMNTAKKRRLL 287
>gi|4262378|gb|AAD14602.1| stage specific peptide 24 [Trypanosoma cruzi]
Length = 287
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++L+TT R S + F E+ VIP++ RG ++++++ A++ ++ ++V+ +
Sbjct: 83 PRVLVTTSREPSQKLLEFAKEIRLVIPSAVRMNRGNLSVRQLMDAARRGQYSDVVVLQES 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
+ PD+L + LP GPT F + LV R DI++ G + P L+ NF TRLG RV +
Sbjct: 143 QGVPDSLTVSHLPLGPTVVFTIHNLVTRHDIQDVGTMSEQHPHLIFENFTTRLGRRVRDV 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ R RV+TF NQ DF+ FRHH + + KG +
Sbjct: 203 LKFLFP-VPKPRPTRVLTFDNQNDFVSFRHHTF----RAVKGREV--------------- 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L E GPR + + GT + E EWV +P M+T+++R L
Sbjct: 243 -----QLTEVGPRMDVAPYRITLGTLEMDDAETEWVLQPYMNTAKKRRLL 287
>gi|401623864|gb|EJS41945.1| imp4p [Saccharomyces arboricola H-6]
Length = 290
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I++TT R S R F E+ + PN+ RG Y + +++ KK T +IV+H +
Sbjct: 86 PRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNYVMPNLVDACKKSGTTDLIVLHEH 145
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P +L I P GPTA F L +V+R DI N GN + P L+ +NF T LG RV +
Sbjct: 146 RGVPTSLTISHFPHGPTAQFSLHNVVMRHDIINGGNQSEVNPHLIFDNFTTDLGKRVACI 205
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LF P+ RV+TF N+ DFI R H Y+ + +D
Sbjct: 206 LKHLFNAGPKKDSERVITFANRGDFISVRQHVYV--------------RTRDG------- 244
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ E GPRF ++L L+ GT + K + EW + + T+ ++ +L
Sbjct: 245 ----VEIAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 290
>gi|407417024|gb|EKF37900.1| ribosome biogenesis protein, putative [Trypanosoma cruzi
marinkellei]
Length = 287
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 121/230 (52%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++L+TT R S + F E+ VIP++ RG +++++E A++ ++ ++V+ +
Sbjct: 83 PRVLVTTSREPSQKLLEFAKEIRLVIPSAVRMNRGNLSVRQLMEAARRGQYSDVVVLQES 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
+ PD++ + LP GPT F + LV R DI++ G + P L+ NF TRLG RV +
Sbjct: 143 QGVPDSITVSHLPLGPTVVFTIHNLVTRHDIQDVGTMSEQHPHLIFENFTTRLGRRVRDV 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ DF+ FRHH + + KG +
Sbjct: 203 LKFLFP-VPKPDATRVLTFDNQNDFVSFRHHTF----RVVKGREV--------------- 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L E GPR L + GT + E EWV +P M+T+++R L
Sbjct: 243 -----QLTEVGPRMELAPYRITLGTLEMDDAETEWVLQPYMNTAKKRRLL 287
>gi|254580607|ref|XP_002496289.1| ZYRO0C14982p [Zygosaccharomyces rouxii]
gi|238939180|emb|CAR27356.1| ZYRO0C14982p [Zygosaccharomyces rouxii]
Length = 284
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 25/251 (9%)
Query: 22 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 81
DE D D+ + P++++TT R S R F E+ + P S RG + +
Sbjct: 59 DESKDAVDIDDEYAATSGISDPRVVVTTSRSPSARLSQFAKEIKLLFPTSVRLNRGNFIV 118
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 141
+++ K + ++++H +R P +L I LP GPTA F L +VLR DI N GN +
Sbjct: 119 NNLVDACNKSGTSDLVLLHEHRGVPTSLTISHLPHGPTAFFTLHNVVLRHDILNRGNQSE 178
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
P L+ +NF T LGHRV +++ LFP P+ RV+TF N+ DFI R H Y+ T+E
Sbjct: 179 VNPHLIFDNFTTPLGHRVETILKHLFPPEPKEDSPRVITFANRGDFISVRQHVYV-RTRE 237
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
L E GPRF ++L L+ GT + K + EW +
Sbjct: 238 G------------------------VELAEVGPRFEMRLFELRLGTVENKDADVEWQLRR 273
Query: 262 EMDTSRRRFFL 272
+ T+ R+ +L
Sbjct: 274 FVRTANRKDYL 284
>gi|50308599|ref|XP_454302.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643437|emb|CAG99389.1| KLLA0E07833p [Kluyveromyces lactis]
Length = 283
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 28/243 (11%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+S+ G A PKI++TT R S R F E+ + P + RG Y + +++ +
Sbjct: 68 DEYSAT--SGIAEPKIIVTTSRDPSTRLSQFAKEIKLLFPTAVRLNRGNYIMPNLVDACQ 125
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 149
+ ++V+H +R P +L + P GPTA F L +VLR DI N GN + P L+ +
Sbjct: 126 TSGTSDLVVLHEHRGVPTSLTVSHFPHGPTAFFTLHNVVLRHDILNSGNQSEVNPHLIFD 185
Query: 150 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
NF T LG RV +++ LFP P+ RV+TF N+ DFI R H Y+ +T+E
Sbjct: 186 NFTTPLGKRVETILKHLFPPGPKKDAARVITFANRGDFISVRQHVYV-KTREG------- 237
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L E GPRF ++L L+ GT + K + EW + + T+ R+
Sbjct: 238 -----------------VELAEVGPRFEMRLFELKLGTLENKDADVEWQLRRFVRTASRK 280
Query: 270 FFL 272
+L
Sbjct: 281 DYL 283
>gi|395542208|ref|XP_003773026.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Sarcophilus harrisii]
Length = 290
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 37/260 (14%)
Query: 14 ETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
E V P DDE D P+I+ITT R S+R F EL ++P +
Sbjct: 65 EDVLNPQDDEYRWAGVED-----------PRIMITTSRDPSSRLKMFAKELKLILPGAQK 113
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG ++ ++ + + T +++VH +R P L++ LP GPTA+F L +V+R DI
Sbjct: 114 MNRGRCEMGALVRACEARGVTDLLLVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDI 173
Query: 134 KNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 193
G + P L+ + F++ LG RV +++SLFP P+ RV+TF NQ D+I FRHH
Sbjct: 174 PGLGTASEAFPHLIFSGFSSHLGQRVSSILRSLFP-VPKDDSHRVITFVNQDDYISFRHH 232
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG- 252
Y KT + V L E GPRF +KL ++ GT + +
Sbjct: 233 VY----------------------RKTDRSTV--ELTEVGPRFEMKLYLIRLGTLEHEAS 268
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
+ EW P T+R++ L
Sbjct: 269 ADVEWRWHPYTHTARKKISL 288
>gi|385303071|gb|EIF47169.1| ribosome production factor 1 [Dekkera bruxellensis AWRI1499]
Length = 210
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P TI++ R DETV + E+ +D +E+ ++ PKIL+TT + F
Sbjct: 35 VPATIDSKRVFDETV----NAEVEGQDDFEEYFKSPEKD--PKILLTTNAHAHKQAYEFA 88
Query: 62 SELLSVIPNSHYYKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ L+ +IPN+ + KR Y +K + +Y ++FT +IV++ +++E + + +I LP+GPT
Sbjct: 89 AMLVEIIPNTXFVKRKRQYSMKDMAKYCTHREFTHLIVINEDKKEVNGMTLIHLPEGPTF 148
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGR 176
+F ++ V RK I HG+PT HIPEL+LNNF TRLG V RL SLFP PEF G+
Sbjct: 149 YFSINSXVKRKQITGHGSPTDHIPELILNNFTTRLGKTVARLFHSLFPHRPEFPGK 204
>gi|151944459|gb|EDN62737.1| U3 snoRNP protein [Saccharomyces cerevisiae YJM789]
gi|256270261|gb|EEU05479.1| Imp4p [Saccharomyces cerevisiae JAY291]
gi|349580862|dbj|GAA26021.1| K7_Imp4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 290
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 30/257 (11%)
Query: 21 DDELFAGNDADEFSSILKQGCA-----PKILITTCRFNSNRGPAFISELLSVIPNSHYYK 75
D L G +AD+ + P+I++TT R S R F E+ + PN+
Sbjct: 59 DQSLKEGEEADDLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLN 118
Query: 76 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 135
RG Y + +++ KK T ++V+H +R P +L I P GPTA F L +V+R DI N
Sbjct: 119 RGNYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDIIN 178
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
GN + P L+ +NF T LG RV +++ LF P+ RV+TF N+ DFI R H Y
Sbjct: 179 AGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQHVY 238
Query: 196 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 255
+ T+E + E GPRF ++L L+ GT + K +
Sbjct: 239 V-RTREG------------------------VEIAEVGPRFEMRLFELRLGTLENKDADV 273
Query: 256 EWVHKPEMDTSRRRFFL 272
EW + + T+ ++ +L
Sbjct: 274 EWQLRRFIRTANKKDYL 290
>gi|440290633|gb|ELP83998.1| brix domain containing protein ZK795.3, putative [Entamoeba
invadens IP1]
Length = 274
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 26/240 (10%)
Query: 34 SSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKD 92
S K G + P + +TT R S++ F E+ +IPNS RG +K ++E K D
Sbjct: 60 SEYAKSGISDPVVFVTTSRDPSSKLKEFSKEIKLIIPNSTRLNRGNLQVKNLVETCKSHD 119
Query: 93 FTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFA 152
T +++VH +R PD L++ P GPTA+F L +V R D K + P L+ +N
Sbjct: 120 VTDLVIVHEHRGIPDGLIVTHFPFGPTAYFGLYNVVSRHDAKTKKTLSQTAPHLIFDNLT 179
Query: 153 TRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKA 212
T LG R ++++LFP P+ +R++TF N +D+I FRHH Y
Sbjct: 180 TPLGKRFEMILKNLFP-VPKPDTKRIMTFANSKDYISFRHHVY----------------- 221
Query: 213 KDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
E + +++ LQE GPRF L+ ++ GT D K E EW+ + ++++ R L
Sbjct: 222 -----EYNEEHQLV--LQEVGPRFELRPYQIKLGTVDMKYAENEWILRSFINSAATRTLL 274
>gi|366995525|ref|XP_003677526.1| hypothetical protein NCAS_0G02870 [Naumovozyma castellii CBS 4309]
gi|342303395|emb|CCC71174.1| hypothetical protein NCAS_0G02870 [Naumovozyma castellii CBS 4309]
Length = 286
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 114/232 (49%), Gaps = 25/232 (10%)
Query: 41 CAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVH 100
P+I++TT R S R F E+ + P + RG Y + ++ K + ++V+H
Sbjct: 80 VEPRIIVTTSRDPSTRLSQFAKEIKLLFPQAVRLNRGNYVMPNLVSACIKSGTSDLVVLH 139
Query: 101 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVG 160
+R P +L I P GPTA+F L +VLR DI N GN + P L+ +NF T LG RV
Sbjct: 140 EHRGVPTSLTISHFPHGPTAYFSLHNVVLRHDILNSGNQSEVNPHLIFDNFTTELGQRVV 199
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
++Q LF P+ RV+TF N+ DFI R H Y+ K +D
Sbjct: 200 TILQHLFSPGPKKDAARVITFANRGDFISVRQHVYV--------------KTRDG----- 240
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF ++L L+ GT + K + EW + + T+ R+ +L
Sbjct: 241 ------VELAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFVRTASRKDYL 286
>gi|11596252|gb|AAG38541.1|AF309805_6 coiled-coil protein [Pneumocystis carinii]
Length = 277
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 91/166 (54%), Gaps = 24/166 (14%)
Query: 107 DALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSL 166
D+L+II LP GP+ +F +S + I HG T HIPEL++NNF T LG V + +SL
Sbjct: 135 DSLIIIHLPSGPSFYFTISSITPTSCIYRHGRATSHIPELIINNFTTYLGLTVENMFRSL 194
Query: 167 FPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 226
FP +F GR+VVT HNQRDFIF R HRYIF + +
Sbjct: 195 FPTQADFEGRQVVTIHNQRDFIFIRRHRYIF------------------------KNDIK 230
Query: 227 TRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
LQE GPRFTLKL LQ G D + +KP +++R RF+L
Sbjct: 231 VSLQELGPRFTLKLRRLQRGIHDRHADNVVYEYKPGEESNRTRFWL 276
>gi|119576017|gb|EAW55613.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast),
isoform CRA_a [Homo sapiens]
Length = 206
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 119/228 (52%), Gaps = 26/228 (11%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT R S+R F EL V P + RG +++ ++ K T ++VVH +R
Sbjct: 1 MITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGT 60
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +++
Sbjct: 61 PVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDILRY 120
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ RV+TF NQ D+I FRHH Y +KT + V
Sbjct: 121 LFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDHRNV 157
Query: 226 ITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 158 --ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 203
>gi|328853172|gb|EGG02312.1| hypothetical protein MELLADRAFT_117561 [Melampsora larici-populina
98AG31]
Length = 518
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 135/248 (54%), Gaps = 30/248 (12%)
Query: 11 EPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 70
E + PD +E F DE +S K+ ++LITT S AFI EL ++
Sbjct: 122 EAQDPTAEPDLEENFE----DESASTPKEN---RVLITTSPRPSLFTQAFIHELANLFGG 174
Query: 71 SHYY-----KRGTYDLKKIIEYAKKKDFTSIIVVHT-----NRREPDALLIIGLPDGPTA 120
H K ++L ++ ++A ++ ++S++V+ NR P + + LP GPTA
Sbjct: 175 KHRADVIPRKTKRFELSRVCKWAIERGYSSMVVIGEAHGGRNRSGPTHMTVCRLPYGPTA 234
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+F+L+ +V K I H PT H PELVL+NF+T LG +G L+QS+FP P+ GR+VV+
Sbjct: 235 YFRLTSIVPSKAIPGHAKPTSHSPELVLSNFSTPLGLSIGTLLQSVFPALPQLEGRQVVS 294
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
NQRDFIFFR RY+F +E K ++K+ RLQE GPRFTLK+
Sbjct: 295 VQNQRDFIFFRRFRYMFAEREKMFL-------------KEGEEKIRARLQEIGPRFTLKI 341
Query: 241 VSLQHGTF 248
L+ GT
Sbjct: 342 RWLKRGTL 349
>gi|260943193|ref|XP_002615895.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851185|gb|EEQ40649.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 285
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S+ L P+I++TT R S + F E+ + PNS RG Y + ++++ +
Sbjct: 68 DEYSA-LSGVNDPRIIVTTSRNPSVKLLQFSKEIKLMFPNSMKLNRGNYIIPELVKSCAR 126
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+IV+H +R P +L + P GP+A F L + LR D+ N GN + P L+ N
Sbjct: 127 AAINDLIVLHEHRGVPTSLTVSHFPHGPSAIFTLHNVKLRHDLPNIGNISEVYPHLIFEN 186
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F TRLG RV ++++ LFP + RV+TF N DFI RHH Y+
Sbjct: 187 FTTRLGQRVVKILKHLFPPGAKKDSSRVITFINNDDFISVRHHVYV-------------- 232
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K KD L E GPRF +KL L+ G D K + EW + + T+ R+
Sbjct: 233 KTKDG-----------VELSEVGPRFEMKLYELRLGLIDNKDADVEWKVRRFVRTANRKN 281
Query: 271 FL 272
+L
Sbjct: 282 YL 283
>gi|398365039|ref|NP_014324.3| Imp4p [Saccharomyces cerevisiae S288c]
gi|1730744|sp|P53941.1|IMP4_YEAST RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4; AltName: Full=Interacting
with MPP10 protein 4
gi|791110|emb|CAA60184.1| unknown [Saccharomyces cerevisiae]
gi|1301963|emb|CAA95949.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190409064|gb|EDV12329.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341687|gb|EDZ69673.1| YNL075Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149286|emb|CAY82528.1| Imp4p [Saccharomyces cerevisiae EC1118]
gi|285814576|tpg|DAA10470.1| TPA: Imp4p [Saccharomyces cerevisiae S288c]
gi|323335815|gb|EGA77094.1| Imp4p [Saccharomyces cerevisiae Vin13]
gi|323346901|gb|EGA81180.1| Imp4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352573|gb|EGA85072.1| Imp4p [Saccharomyces cerevisiae VL3]
gi|365763333|gb|EHN04862.1| Imp4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 290
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I++TT R S R F E+ + PN+ RG Y + +++ KK T ++V+H +
Sbjct: 86 PRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNYVMPNLVDACKKSGTTDLVVLHEH 145
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P +L I P GPTA F L +V+R DI N GN + P L+ +NF T LG RV +
Sbjct: 146 RGVPTSLTISHFPHGPTAQFSLHNVVMRHDIINAGNQSEVNPHLIFDNFTTALGKRVVCI 205
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LF P+ RV+TF N+ DFI R H Y+ T+E
Sbjct: 206 LKHLFNAGPKKDSERVITFANRGDFISVRQHVYV-RTREG-------------------- 244
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ E GPRF ++L L+ GT + K + EW + + T+ ++ +L
Sbjct: 245 ----VEIAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 290
>gi|342321055|gb|EGU12993.1| Hypothetical Protein RTG_01034 [Rhodotorula glutinis ATCC 204091]
Length = 481
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 120/229 (52%), Gaps = 27/229 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++LITT R S++ F EL IPNS RG Y + ++ + + T +IVVH +
Sbjct: 275 PRVLITTSRDPSSKLQQFAKELRLCIPNSTRINRGNYVMSELSDACRANQMTDLIVVHEH 334
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDAL++ P GPT F L+ +VLR D+ T P L+ F ++LG RV
Sbjct: 335 RGVPDALMLSHFPHGPTVLFTLTGVVLRHDLGGLQGTTISEAYPHLIFEGFGSKLGKRVQ 394
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ +FP P+ +R + F N+ DFI FRHH ++ KT
Sbjct: 395 DVLKYIFP-VPKDDSKRTLAFVNEGDFISFRHHVFV----------------------KT 431
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
S ++V +L E GPRF ++ +++GT + + + EWV +P M T R+R
Sbjct: 432 SHKEV--QLAEVGPRFEMRPYEIRNGTIEQQEADVEWVLRPYMRTGRKR 478
>gi|358056728|dbj|GAA97391.1| hypothetical protein E5Q_04069 [Mixia osmundae IAM 14324]
Length = 365
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 122/229 (53%), Gaps = 27/229 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P I++TT R S+R F E+ V+PN+H RG ++++ E + + T ++V+H +
Sbjct: 159 PNIVVTTSRDPSSRLAQFAKEMRLVLPNAHRLNRGNAVMRELAEACRANNVTDLVVLHEH 218
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG--HIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT F L +VLR D + T P L+ +NF+++LG+R+
Sbjct: 219 RGVPDAMIVSHFPHGPTTLFTLHNVVLRHDTTSFSTSTVSEQYPHLIFDNFSSKLGNRIQ 278
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ R +TF N+ DFI FRHH ++ K+
Sbjct: 279 SVLKHLFP-VPKPDATRTMTFANEGDFISFRHHIFV----------------------KS 315
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
S ++V +L E GPRF ++ ++ GT + + EWV +P T+ +R
Sbjct: 316 SHKEV--QLAEVGPRFEMRAYEIRQGTIEQADADIEWVLRPYQRTASKR 362
>gi|406603305|emb|CCH45184.1| Ribosome production factor 1 [Wickerhamomyces ciferrii]
Length = 288
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 29/260 (11%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
DE++ + +++ ++ +FS I++ PK++ITT R S+R F E+ + PNS
Sbjct: 58 DESIQKNSENDEGIDDEYSQFSGIVE----PKLIITTSRDPSSRLLQFSKEIKLIFPNSI 113
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG Y + ++ A+ + + +I++H +R P ++ I P GPTA F L +VLR D
Sbjct: 114 RLNRGNYIVPNLVTAAQNSNTSDLILLHEHRGVPTSMTISHFPHGPTAFFTLHNVVLRHD 173
Query: 133 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
+ GN + P L+ NF ++LG RV +++ LFP + RV+TF N DFI R
Sbjct: 174 MPQTGNQSEAYPHLIFENFTSKLGERVVTILKHLFPPGVKKDSPRVITFKNDGDFISVRQ 233
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
H Y+ + K + E GPRF ++L L+ GT + K
Sbjct: 234 HLYV-------------------------KTKTGVEISEIGPRFEMRLFELRLGTLENKD 268
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
+ EW + + T+ R+ +L
Sbjct: 269 ADIEWKLRRFVRTANRKDYL 288
>gi|449303318|gb|EMC99326.1| hypothetical protein BAUCODRAFT_65326 [Baudoinia compniacensis UAMH
10762]
Length = 295
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++L+TT R S+R +F E+ ++P + RG L ++ AK + +I++H +
Sbjct: 86 PRVLVTTSRDPSSRLGSFAKEIRLLLPTAIRLNRGNLVLPNLVSSAKSSGLSDVILLHEH 145
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 160
R P A+ I LP GPTA F L +VLR DI N G + P L+ NF T LG RV
Sbjct: 146 RGTPTAMTISHLPHGPTASFSLHNVVLRADIPNSARGTVSESYPHLIFENFTTALGKRVV 205
Query: 161 RLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++Q LFP + G RVVTF N D I RHH ++
Sbjct: 206 KILQHLFPPREGGTKLGSRVVTFKNIEDSIEVRHHVFV---------------------- 243
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
KT Q V L E GPR T++L ++ GT + K G+ EW TS+++ +L
Sbjct: 244 KTGYQSV--ELAEVGPRMTMRLFEIRQGTAENKEGDVEWALTQYTRTSKKKDYL 295
>gi|89954461|gb|ABD83653.1| disrupted snoRNP component [synthetic construct]
Length = 317
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I++TT R S R F E+ + PN+ RG Y + +++ KK T ++V+H +
Sbjct: 113 PRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNYVMPNLVDACKKSGTTDLVVLHEH 172
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P +L I P GPTA F L +V+R DI N GN + P L+ +NF T LG RV +
Sbjct: 173 RGVPTSLTISHFPHGPTAQFSLHNVVMRHDIINAGNQSEVNPHLIFDNFTTALGKRVVCI 232
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LF P+ RV+TF N+ DFI R H Y+ T+E
Sbjct: 233 LKHLFNAGPKKDSERVITFANRGDFISVRQHVYV-RTREG-------------------- 271
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ E GPRF ++L L+ GT + K + EW + + T+ ++ +L
Sbjct: 272 ----VEIAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 317
>gi|119576020|gb|EAW55616.1| IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast),
isoform CRA_d [Homo sapiens]
Length = 325
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 117/225 (52%), Gaps = 26/225 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 105 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 164
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 165 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 224
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 225 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 261
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTS 266
+ V L E GPRF LKL ++ GT + + + EW P +T+
Sbjct: 262 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTA 304
>gi|402216404|gb|EJT96509.1| Brix-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 288
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 117/229 (51%), Gaps = 27/229 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F E+ V PN+H RG Y + ++ + D T ++++H +
Sbjct: 82 PKIVITTSRDPSSRLQQFAKEMRLVFPNAHRINRGNYVVSELATACRANDVTDLLILHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDAL++ P GPT F L + LR DI +G T P LV F++ LG+RV
Sbjct: 142 RGTPDALIVSHFPHGPTLFFTLHNVALRHDIAAYGQSTVSEQYPHLVFEGFSSPLGNRVM 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
++ LFP P+ +RV++F N+ DFI FRHH ++ +T
Sbjct: 202 DALRYLFP-VPKDDSKRVMSFVNESDFISFRHHVFV----------------------RT 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
S + V L E GPRF +K ++ GT + E EWV T+++R
Sbjct: 239 SHKSV--ELAEVGPRFEMKPYEIRLGTIEQNEAEKEWVLTHYTRTAKKR 285
>gi|365758678|gb|EHN00509.1| Imp4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842762|gb|EJT44832.1| IMP4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 290
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 30/257 (11%)
Query: 21 DDELFAGNDADEFSSILKQGCA-----PKILITTCRFNSNRGPAFISELLSVIPNSHYYK 75
D L G +AD+ + P+I++TT R S R F E+ + PN+
Sbjct: 59 DQSLKEGEEADDLQVDDEYAATSGITDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLN 118
Query: 76 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 135
RG Y + +++ KK T ++V+H +R P +L I P GPTA F L +V+R DI +
Sbjct: 119 RGNYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDIID 178
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
GN + P L+ +NF T LG RV +++ LF P+ RV+TF N+ DFI R H Y
Sbjct: 179 GGNQSEVNPHLIFDNFTTDLGKRVECILKHLFNAGPKKDSERVITFANKGDFISVRQHVY 238
Query: 196 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 255
+ + +D + E GPRF ++L L+ GT + K +
Sbjct: 239 V--------------RTRDG-----------VEVAEVGPRFEMRLFELRLGTLENKDADV 273
Query: 256 EWVHKPEMDTSRRRFFL 272
EW + + T+ ++ +L
Sbjct: 274 EWQLRRFIRTANKKDYL 290
>gi|407927467|gb|EKG20359.1| Anticodon-binding protein [Macrophomina phaseolina MS6]
Length = 298
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L+TT R S R AF E+ ++P S RG L I+ A
Sbjct: 72 DLDDEYAQLSGVVDPRVLVTTSRDPSTRLGAFAKEVRLLLPTSIRVNRGNLVLPNIVSSA 131
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
K + ++++H +R P A+ + P GPTA F L +VLR DI N G + P L
Sbjct: 132 KAAGLSDVVLLHEHRGTPTAMTVSHFPHGPTASFSLHNVVLRHDIPNAARGTVSESYPHL 191
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ F+T LG RV +++Q LFP P G RVVTF N+ D I RHH ++
Sbjct: 192 IFEGFSTNLGKRVVKILQHLFPPRPAALTTKDVGNRVVTFVNREDSIEVRHHVFV----- 246
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+T Q V L E GPR T++L ++ GT + K G+ EW
Sbjct: 247 -----------------RTGYQSV--ELAEVGPRMTMRLFEIRGGTLENKDGDIEWHMNQ 287
Query: 262 EMDTSRRRFFL 272
T++++ +L
Sbjct: 288 FTRTAKKKDYL 298
>gi|242080607|ref|XP_002445072.1| hypothetical protein SORBIDRAFT_07g003670 [Sorghum bicolor]
gi|241941422|gb|EES14567.1| hypothetical protein SORBIDRAFT_07g003670 [Sorghum bicolor]
Length = 293
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 123/230 (53%), Gaps = 27/230 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKIL TT R S F+ EL V P S RG + +I+E + + T +I+VH +
Sbjct: 83 PKILFTTSRNPSAPLTQFVKELKVVFPMSQRMNRGGQVISEIVESCRSHNITDLILVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFATRLGHRV 159
R +PD L++ LP+GPTA+F L +V R DI K G + P LVL+NF+T++G R
Sbjct: 143 RGQPDGLIVSHLPNGPTAYFGLLNVVTRHDIRGRKAMGKMSEAYPHLVLDNFSTQVGERT 202
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LF P+ +R++TF N+ ++I FRHH ++E GS
Sbjct: 203 ATILKHLF-LMPKPDSKRIITFANRDEYISFRHH--VYEKSGGPGS-------------- 245
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
L+E GPRF L+L ++ G + + E+V +P ++T++++
Sbjct: 246 -------MELKEVGPRFELRLYQIKLGAVEQNEAQSEFVLRPYINTAKKQ 288
>gi|255721277|ref|XP_002545573.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Candida
tropicalis MYA-3404]
gi|240136062|gb|EER35615.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Candida
tropicalis MYA-3404]
Length = 286
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 120/242 (49%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S+ L PK+LITT R S + F E+ + PNS RG Y + ++ +
Sbjct: 71 DEYSA-LSGISDPKVLITTSRDPSVKLLQFSKEIKLMFPNSLKLNRGNYIMSDLVSTCSR 129
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+ +I++H +R P +L + P GPTA F L + LR D+ N GN + P L+ N
Sbjct: 130 VQISDMILLHEHRGVPSSLTVSHFPHGPTAIFTLHNVKLRHDLPNLGNVSESYPHLIFEN 189
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F T LG RV +++Q LFP + RV+TF N D+I RHH Y+
Sbjct: 190 FNTPLGKRVVKILQHLFPPGVKKDSSRVITFVNNDDYISVRHHVYV-------------- 235
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
KAKD+ + E GPRF ++L ++ G D K + EW + + T+ R+
Sbjct: 236 KAKDS-----------VEISEVGPRFEMRLYEIRLGLPDNKDADVEWQLRRFIRTANRKN 284
Query: 271 FL 272
+L
Sbjct: 285 YL 286
>gi|302693983|ref|XP_003036670.1| hypothetical protein SCHCODRAFT_46039 [Schizophyllum commune H4-8]
gi|300110367|gb|EFJ01768.1| hypothetical protein SCHCODRAFT_46039, partial [Schizophyllum
commune H4-8]
Length = 307
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 29/233 (12%)
Query: 43 PKILITT-CRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHT 101
P+I+IT R +S + E+ V PN+H RG Y +K++ + + D T +IV+H
Sbjct: 81 PEIVITHFSRSSSEVLQSRRWEMRLVFPNAHRINRGNYVVKELADACRANDVTDLIVLHE 140
Query: 102 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRV 159
+R PDA+++ P GPT F L+ ++LR DI ++ T P L+ +NF+++LGHR+
Sbjct: 141 HRGVPDAMIVSHFPHGPTVFFTLNNVLLRHDIASYKESTVSEQYPHLIFDNFSSQLGHRI 200
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ +RV+TF N+ DFI FRHH ++ KE
Sbjct: 201 RDVLKYLFP-VPKEDSKRVMTFANEDDFIAFRHHVFVKHGKE------------------ 241
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+L E GPRF +K ++ GT + E EWV TS++R L
Sbjct: 242 -------VQLAEVGPRFQMKPYEIRQGTIEQTESEREWVLAHYARTSKKRNVL 287
>gi|410083415|ref|XP_003959285.1| hypothetical protein KAFR_0J00820 [Kazachstania africana CBS 2517]
gi|372465876|emb|CCF60150.1| hypothetical protein KAFR_0J00820 [Kazachstania africana CBS 2517]
Length = 285
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 114/230 (49%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I+ITT R S R F E+ + P + RG + ++ A K + I+++H +
Sbjct: 81 PRIVITTSRDPSTRLSQFAKEIKLMFPEATRLNRGNLIMSNLVSAAIKSGTSDIVLLHEH 140
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P +L + LP GPTA F L +VLR DI N GN + P L+ + F T+LG RV +
Sbjct: 141 RGVPTSLTVSHLPHGPTAFFSLHNVVLRHDILNSGNVSEVNPHLIFDGFTTKLGERVVSI 200
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LF P+ RV+TF N+ DFI R H Y+ + +D
Sbjct: 201 LKHLFAPGPKKDSERVMTFANRGDFISVRQHVYV--------------RTRDG------- 239
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF +KL L+ GT D K + EW + + T+ R+ +L
Sbjct: 240 ----VELAEVGPRFEMKLFELRLGTLDNKDADIEWQLRRFVRTANRKDYL 285
>gi|344229341|gb|EGV61227.1| Brix-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229342|gb|EGV61228.1| hypothetical protein CANTEDRAFT_116753 [Candida tenuis ATCC 10573]
Length = 283
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 123/246 (50%), Gaps = 28/246 (11%)
Query: 28 NDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 86
N DE++S G A P+I++TT R S + F E+ + PNS RG Y + ++IE
Sbjct: 65 NVDDEYAST--SGIADPRIIVTTSRNPSVKLSQFSKEIKLMFPNSIKLNRGNYIIPELIE 122
Query: 87 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 146
+K +IV+H +R P ++ I P GP+ F L + LR D+ GN + P L
Sbjct: 123 SCQKSGMNDMIVLHEHRGVPTSITINHFPHGPSCIFTLHNVKLRHDLPEMGNVSESYPHL 182
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+ F+++LG RV ++++ LFP + RV+TF N+ D+I RHH ++
Sbjct: 183 IFEGFSSKLGERVVQVLKHLFPPGEKKSSSRVITFVNKNDYISVRHHIFV---------- 232
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 266
K KD+ L E GPRF +KL ++ G D K E EW K + T+
Sbjct: 233 ----KTKDS-----------VELSEIGPRFEMKLFEMRLGNMDNKESEVEWQLKRFIRTA 277
Query: 267 RRRFFL 272
R+ +L
Sbjct: 278 NRKNYL 283
>gi|403218562|emb|CCK73052.1| hypothetical protein KNAG_0M01990 [Kazachstania naganishii CBS
8797]
Length = 286
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 119/243 (48%), Gaps = 28/243 (11%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+S G A P+I++TT R S R F E+ + P + RG + ++
Sbjct: 71 DEYSHT--SGVADPRIVVTTSRDASTRLLQFAKEIKLMFPQATRLNRGNIIISNLVGACI 128
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 149
K + +IV+H +R P +L I P GPTA F L +VLR DI N GN + P L+ +
Sbjct: 129 KSGTSDLIVLHEHRGVPTSLTISHFPHGPTASFSLHNVVLRHDILNRGNVSEMNPHLIFD 188
Query: 150 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
F T+LG RV +++ LF + +RV+TF N+ DFI R H Y+
Sbjct: 189 GFTTKLGERVVSILKHLFAPGTKPTSQRVITFANRGDFISVRQHVYV------------- 235
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
K KD+ L E GPRF +KL L+ GT D K + EW K + T+ R+
Sbjct: 236 -KTKDS-----------VELAEVGPRFEMKLYELRLGTMDNKDADVEWQLKRFVRTANRK 283
Query: 270 FFL 272
+L
Sbjct: 284 DYL 286
>gi|452987991|gb|EME87746.1| hypothetical protein MYCFIDRAFT_62535 [Pseudocercospora fijiensis
CIRAD86]
Length = 295
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 118/242 (48%), Gaps = 28/242 (11%)
Query: 35 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 94
S L P++L+TT R S+R AF E+ ++P S RG L + AK +
Sbjct: 78 SYLSGVVDPRVLVTTSRDPSSRLSAFAKEIRLLLPTSIRLNRGNLILPNLTASAKSSGLS 137
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFA 152
+I++H +R P A+ + LP GPTA F L +VLR DI N G + P L+ F
Sbjct: 138 DMILLHEHRGTPTAMTVSHLPHGPTASFSLHNVVLRHDIPNASRGTVSESYPHLIFEGFT 197
Query: 153 TRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
T+LG RV +++Q LFP + G RV+TF N D I RHH ++
Sbjct: 198 TQLGKRVVKILQHLFPPRDGGKNLGSRVITFKNIEDSIEVRHHVFV-------------- 243
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
KT Q V L E GPR T++L ++ GT + K G+ EW TS+++
Sbjct: 244 --------KTGYQSV--ELAEVGPRMTMRLFEIRQGTLEKKDGDVEWHMNQYTRTSKKKD 293
Query: 271 FL 272
+L
Sbjct: 294 YL 295
>gi|367012075|ref|XP_003680538.1| hypothetical protein TDEL_0C04380 [Torulaspora delbrueckii]
gi|359748197|emb|CCE91327.1| hypothetical protein TDEL_0C04380 [Torulaspora delbrueckii]
Length = 288
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I++TT R S R F E+ + P + RG Y + ++ K + ++++H +
Sbjct: 84 PRIIVTTSRDPSTRLSQFAKEIKLLFPTAVRLNRGNYIMPNLVSACVKSGTSDLVILHEH 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P +L + P GPTA+F L +VLR DI N GN + P ++ NF T LG RV +
Sbjct: 144 RGVPTSLTVSHFPHGPTAYFTLHNVVLRHDILNSGNQSEVNPHMIFENFTTPLGKRVESI 203
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF N+ DFI R H Y+ T+E
Sbjct: 204 LKHLFPPGPKKDSPRVITFANRGDFISVRQHVYV-RTREG-------------------- 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ E GPRF ++L L+ GT D K + EW + + T+ R+ +L
Sbjct: 243 ----VEIAEVGPRFEMRLFELRLGTLDNKDADVEWQLRRFVRTAARKDYL 288
>gi|451848177|gb|EMD61483.1| hypothetical protein COCSADRAFT_162931 [Cochliobolus sativus
ND90Pr]
Length = 295
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 120/246 (48%), Gaps = 29/246 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE++ L P+IL+TT R S+R F E+ ++P S RG L ++E AK
Sbjct: 75 DEYAQ-LSGVVDPRILVTTSRDPSSRLGTFAKEIRLLLPTSIRLNRGNMILPNLVESAKS 133
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVL 148
+ I+++H +R P AL + P GPTA F L +VLR DI N G + P L+
Sbjct: 134 GGLSDIVLLHEHRGTPTALTVSHFPHGPTASFSLHNVVLRADIPNSSRGTVSESYPHLIF 193
Query: 149 NNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
F T+LG R ++++ LFP ++ G RVVTF N D I RHH ++
Sbjct: 194 EGFTTKLGQRCVQILKHLFPPREANAKVGNRVVTFKNIEDTIEVRHHVFV---------- 243
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 266
KT Q V L E GPR +++L ++ GT D K G+ EW T
Sbjct: 244 ------------KTGYQSV--ELAEVGPRMSMRLFEIRAGTLDNKEGDVEWHLNQYTRTG 289
Query: 267 RRRFFL 272
R++ +L
Sbjct: 290 RKKDYL 295
>gi|396463342|ref|XP_003836282.1| similar to U3 small nucleolar ribonucleoprotein protein IMP4
[Leptosphaeria maculans JN3]
gi|312212834|emb|CBX92917.1| similar to U3 small nucleolar ribonucleoprotein protein IMP4
[Leptosphaeria maculans JN3]
Length = 296
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 130/265 (49%), Gaps = 33/265 (12%)
Query: 13 DET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNS 71
DET R +DEL ++ + S ++ P++L+TT R S+R F E+ ++P +
Sbjct: 60 DETRTDRTAEDELQLDDEYAQLSGVVD----PRVLVTTSRDPSSRLGTFAKEIRLLLPTA 115
Query: 72 HYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 131
RG L ++ A+ + +I++H +R P AL + P GPTA F L +VLR
Sbjct: 116 IRLNRGNLVLGNLVSSAQASGLSDVILLHEHRGTPTALTVSHFPHGPTASFSLHNVVLRA 175
Query: 132 DIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDF 187
DI N G + P L+ F T+LG RV ++I+ LFP ++ G RVVTF N D
Sbjct: 176 DIPNASRGTVSESYPHLIFEGFGTKLGKRVVQIIKHLFPPREANAKVGSRVVTFKNIEDT 235
Query: 188 IFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 247
I RHH ++ KT Q+V L E GPR +++L ++ GT
Sbjct: 236 IEVRHHVFV----------------------KTGYQQV--ELAEVGPRMSMRLFEIRAGT 271
Query: 248 FDTKGGEFEWVHKPEMDTSRRRFFL 272
+ K G+ EW T R++ +L
Sbjct: 272 LENKEGDVEWHLNQYTRTGRKKEYL 296
>gi|254565149|ref|XP_002489685.1| Component of the SSU processome, which is required for pre-18S rRNA
processing [Komagataella pastoris GS115]
gi|238029481|emb|CAY67404.1| Component of the SSU processome, which is required for pre-18S rRNA
processing [Komagataella pastoris GS115]
gi|328350104|emb|CCA36504.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Komagataella
pastoris CBS 7435]
Length = 285
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 26/251 (10%)
Query: 22 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 81
DE DE+S+ L PK+++TT R S++ F E+ + P S RG Y +
Sbjct: 59 DESIQDEVDDEYSA-LSGVIDPKVVVTTSRDPSSKLQQFSKEIRLLFPTSVRINRGNYVM 117
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 141
++E K ++V+H +R P L I LP GPTA F L +VLR DI + N +
Sbjct: 118 PNLVESCKGSAVNDLVVLHEHRGVPTTLTISHLPHGPTAIFTLHNVVLRHDINDTSNQSE 177
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
P L+ NF+++LG RV +++ LFP + RV++F N+ DFI R H Y+
Sbjct: 178 AYPHLIFENFSSKLGKRVETVLKHLFPPGVKKDSPRVISFINKDDFISVRQHVYV----- 232
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+ +D L E GPRF ++L L+ GT D K + EW +
Sbjct: 233 ---------RTRDG-----------VELSEVGPRFEMRLFELRLGTLDNKDADTEWQLRR 272
Query: 262 EMDTSRRRFFL 272
+ T+ R+ +L
Sbjct: 273 FVRTANRKNYL 283
>gi|149239306|ref|XP_001525529.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451022|gb|EDK45278.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 287
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 111/229 (48%), Gaps = 25/229 (10%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S L PK++ITT R S R F E+ + PNS RG Y + +++
Sbjct: 67 DIDDEYSALSGISDPKVIITTSRDPSVRLLQFSKEIKLMFPNSLKLNRGNYIINDLVKTC 126
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 148
+ + +I++H +R P +L + P GPTA F L + LR D+ N GN + P L+
Sbjct: 127 TRVQISDLIILHEHRGVPTSLTVSHFPHGPTAIFTLHNVKLRHDLPNLGNISESYPHLIF 186
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NF T LG RV +++Q LFP + RV+TF N DFI RHH Y+ TK+S
Sbjct: 187 ENFNTALGKRVVKILQHLFPPGVKRDSSRVITFVNNDDFISVRHHVYV-RTKDS------ 239
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
+ E GPRF +KL ++ G D K + EW
Sbjct: 240 ------------------VEISEIGPRFEMKLYEIRLGLPDNKDADVEW 270
>gi|444322137|ref|XP_004181724.1| hypothetical protein TBLA_0G02670 [Tetrapisispora blattae CBS 6284]
gi|387514769|emb|CCH62205.1| hypothetical protein TBLA_0G02670 [Tetrapisispora blattae CBS 6284]
Length = 292
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 38/266 (14%)
Query: 7 ENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLS 66
ENT DE DDE A + + P+++++T R S R F E+
Sbjct: 65 ENTTNDDEDSI---DDEYSATSGIQD----------PRVIVSTSRDPSTRLSQFAKEVKL 111
Query: 67 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 126
+ P S RG Y + ++ K + + ++++H +R P +L I LP GPTA F L
Sbjct: 112 LFPTSIRLNRGNYVMSHLVAACNKSNSSDLVILHEHRGVPTSLTISHLPYGPTAFFSLHN 171
Query: 127 LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRD 186
+VLR DI N GN + P L+ NF T+LG RV +++ LFP + RV+TF N D
Sbjct: 172 VVLRHDILNSGNQSEINPHLIFENFTTKLGKRVETILKHLFPPGVKKDSSRVITFANNGD 231
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
+I R H Y+ T+E + E GPRF ++L L+ G
Sbjct: 232 YISVRQHVYV-RTREG------------------------VEMAEVGPRFEMRLFELRLG 266
Query: 247 TFDTKGGEFEWVHKPEMDTSRRRFFL 272
T D K + EW + + T+ R+ +L
Sbjct: 267 TLDNKDADVEWKLRRFVRTASRKDYL 292
>gi|402593092|gb|EJW87019.1| brix domain-containing protein [Wuchereria bancrofti]
Length = 306
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 44/263 (16%)
Query: 23 ELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS--------------ELLSVI 68
E+ A +D ++ PK+++TT R S + F+ E+ +
Sbjct: 63 EVLAIDDEYRYAG----AADPKVVLTTSREPSAKLKIFLKASIFRLLIFQIQDFEMRLMF 118
Query: 69 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 128
PN+ RG YD+KK+I+ K D T I++H R PD +++ LP GPTA+F L+ +V
Sbjct: 119 PNAQRINRGHYDIKKLIQACKANDITDFILLHETRGNPDGMIVCHLPFGPTAYFTLANVV 178
Query: 129 LRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFI 188
+R ++ + G + P L+ ++ + LG R+ +++ LFP P+ RR+VTF N +DFI
Sbjct: 179 MRHEVPDCGTISEEYPHLIFDSLNSALGRRLTTILKHLFP-VPKIDSRRIVTFINTQDFI 237
Query: 189 FFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
FRHH Y +K G +L+E GPR +K ++ GT
Sbjct: 238 SFRHHTY---SKNEHGE---------------------IKLKEIGPRLEMKPYLIKMGTI 273
Query: 249 DTKGGE-FEWVHKPEMDTSRRRF 270
D E EW + +++R+R
Sbjct: 274 DNADAERTEWALRSYTNSARKRL 296
>gi|448114296|ref|XP_004202539.1| Piso0_001380 [Millerozyma farinosa CBS 7064]
gi|359383407|emb|CCE79323.1| Piso0_001380 [Millerozyma farinosa CBS 7064]
Length = 284
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S+ L PK+++TT R S + F E+ PNS RG Y + I+ +
Sbjct: 68 DEYSA-LSGITEPKVIVTTSRDPSVKLLQFSKEMKLFFPNSMKLNRGNYIISDIVASCLR 126
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
T ++V+H +R P +L I P GP+A F L + LR D+ N GN + P L+ N
Sbjct: 127 SQVTDLVVLHEHRGTPTSLSISHFPHGPSAMFTLHNVKLRHDLPNIGNASEAYPHLIFEN 186
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F T LG RV ++++ LFP + RV+TF N DFI RHH Y+
Sbjct: 187 FTTDLGKRVVKILKHLFPPGAKKDSSRVITFVNNEDFISVRHHVYV-------------- 232
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K KD L E GPRF ++L ++ G D + + EW + T+ R+
Sbjct: 233 KVKDN-----------VELSEVGPRFEMRLYEIKLGLMDNQDCDTEWQLRRFTRTANRKN 281
Query: 271 FL 272
+L
Sbjct: 282 YL 283
>gi|71006196|ref|XP_757764.1| hypothetical protein UM01617.1 [Ustilago maydis 521]
gi|46097137|gb|EAK82370.1| hypothetical protein UM01617.1 [Ustilago maydis 521]
Length = 288
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 26/228 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++L+TT R S++ F E+ + PNS RG Y + ++ A+ T ++V+H +
Sbjct: 83 PRVLVTTSRDPSSKLTQFAKEVRLLFPNSTRLNRGGYTVSDLVAAARSNGITDMVVLHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG-HIPELVLNNFATRLGHRVGR 161
R PDA+++ LP GPT F L +VLR ++ + P L+ N +++LG RV
Sbjct: 143 RGVPDAMVVSHLPHGPTLLFTLHNVVLRHEVSAQSSTVSEQYPHLIFENLSSKLGLRVQT 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
++ LFP P+ RV+++ N DFI FRHH ++ KTS
Sbjct: 203 ALKHLFP-VPKPDSSRVMSWINNNDFISFRHHVFL----------------------KTS 239
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
+ V +L E GPRF ++ + GT D + EWV +P M++++++
Sbjct: 240 HRDV--QLAEVGPRFEARVYQINQGTLDQPDADIEWVLRPYMNSAKKK 285
>gi|20381023|gb|AAH28802.1| Bxdc5 protein, partial [Mus musculus]
Length = 106
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 79/124 (63%), Gaps = 24/124 (19%)
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+LNNF TRLGH +GR+ SLFP +P+F GR+V TFHNQRD+IFFR HRYIF++++ G
Sbjct: 1 ILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVG-- 58
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 266
+QE GPRFTLKL SLQ GTFD+K GE+EWVHK S
Sbjct: 59 ----------------------IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKVCAYCS 96
Query: 267 RRRF 270
+ F
Sbjct: 97 KAHF 100
>gi|145548718|ref|XP_001460039.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427867|emb|CAK92642.1| unnamed protein product [Paramecium tetraurelia]
Length = 287
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 120/231 (51%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I++TT R S R + E+ + PN RG +K ++ + ++K+F+ +I+VH +
Sbjct: 83 PQIVLTTSRSPSQRLITLMKEMGLIFPNCTRVNRGALVVKDLVIHCQQKNFSDLIIVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLGHRVGR 161
R EPD L+I +P GPT +F + VLR D+ +P + P L+ +NF+T+LG RV
Sbjct: 143 RGEPDGLIISHMPLGPTIYFGVKNAVLRHDLDVRADPLSEQYPHLIFDNFSTKLGERVTT 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFP P+ +RV+TFHN+ I FRHH Y +K+
Sbjct: 203 ILKHLFP-VPKIDSKRVLTFHNENGVISFRHHTY----------------------QKSF 239
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
Q L E GPRF LK + GT K EW + ++T+ ++ L
Sbjct: 240 NQ---VDLNEQGPRFELKPYKITLGTIGQKEAIVEWQLRTFINTAGKKSVL 287
>gi|453089105|gb|EMF17145.1| Brix-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 295
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 118/242 (48%), Gaps = 28/242 (11%)
Query: 35 SILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 94
S L P++L+TT R S+R F E+ ++P S RG L ++ AK +
Sbjct: 78 SYLSGVVEPRVLVTTSRDPSSRLGQFSKEIRLLLPTSIRLNRGNTILPNLVSSAKANGLS 137
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFA 152
+I++H +R P AL I P GPTA F L +VLR DI N G + P L+ F
Sbjct: 138 DLILLHEHRGTPTALTISHFPHGPTASFSLHNVVLRHDIPNVSRGTVSESYPHLIFEGFT 197
Query: 153 TRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
T+LG RV +++Q LFP +S G RVVTF N D I RHH ++
Sbjct: 198 TQLGKRVLKILQHLFPPRESGTKLGSRVVTFKNIEDSIEVRHHVFV-------------- 243
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
KT Q V L E GPR T++L ++ GT + K G+ EW TS+++
Sbjct: 244 --------KTGYQSV--ELAEVGPRMTMRLFEIRQGTAENKDGDVEWHMNQYTRTSKKKD 293
Query: 271 FL 272
+L
Sbjct: 294 YL 295
>gi|451999185|gb|EMD91648.1| hypothetical protein COCHEDRAFT_1224736 [Cochliobolus
heterostrophus C5]
Length = 295
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 120/246 (48%), Gaps = 29/246 (11%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE++ L P+IL+TT R S+R F E+ ++P S RG L ++E AK
Sbjct: 75 DEYAQ-LSGVVDPRILVTTSRDPSSRLGTFAKEIRLLLPTSIRLNRGNMILPNLVESAKS 133
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVL 148
+ ++++H +R P AL + P GPTA F L +VLR DI N G + P L+
Sbjct: 134 GGLSDMVLLHEHRGTPTALTVSHFPHGPTASFSLHNVVLRADIPNSSRGTVSESYPHLIF 193
Query: 149 NNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
F T+LG R ++++ LFP ++ G RVVTF N D I RHH ++
Sbjct: 194 EGFTTKLGQRCVQILKHLFPPREANAKVGNRVVTFKNIEDTIEVRHHVFV---------- 243
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTS 266
KT Q V L E GPR +++L ++ GT D K G+ EW T
Sbjct: 244 ------------KTGYQSV--ELAEVGPRMSMRLFEIRAGTLDNKEGDVEWHLNQYTRTG 289
Query: 267 RRRFFL 272
R++ +L
Sbjct: 290 RKKDYL 295
>gi|448111744|ref|XP_004201914.1| Piso0_001380 [Millerozyma farinosa CBS 7064]
gi|359464903|emb|CCE88608.1| Piso0_001380 [Millerozyma farinosa CBS 7064]
Length = 285
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S+ L PK+++TT R S + F E+ PNS RG Y + I+ +
Sbjct: 68 DEYSA-LSGITEPKVIVTTSRDPSVKLLQFSKEMKLFFPNSMKLNRGNYIISDIVASCLR 126
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
T ++V+H +R P +L I P GP+A F L + LR D+ N GN + P L+ N
Sbjct: 127 SQVTDLVVLHEHRGTPTSLSISHFPHGPSAMFTLHNVKLRHDLPNIGNASEVYPHLIFEN 186
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F T LG RV ++++ LFP + RV+TF N DFI RHH Y+
Sbjct: 187 FTTDLGKRVVKILKHLFPPGAKKDSSRVITFVNNEDFISVRHHVYV-------------- 232
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K KD L E GPRF ++L ++ G D + + EW + T+ R+
Sbjct: 233 KVKDN-----------VELSEVGPRFEMRLYEIKLGLMDNQDCDTEWQLRRFTRTANRKN 281
Query: 271 FL 272
+L
Sbjct: 282 YL 283
>gi|50551469|ref|XP_503208.1| YALI0D23859p [Yarrowia lipolytica]
gi|73621064|sp|Q6C804.1|IMP4_YARLI RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|49649076|emb|CAG81408.1| YALI0D23859p [Yarrowia lipolytica CLIB122]
Length = 283
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 29/270 (10%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+ + + E +T+ DE DE+S+ + PK+++TT R S R F
Sbjct: 43 PKDVADDEELRKTIAY---DESVQDEIDDEYSA-MSGITDPKVVVTTSRDPSTRLSQFAK 98
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
E+ + P S RG L ++ K + +IV+H +R P A+ + P GPTA+F
Sbjct: 99 EVKLLFPTSIRLNRGGTVLPSLVSACKTSASSDLIVLHEHRGVPTAMTVSHFPHGPTAYF 158
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
L +VLR D+ + GN + P L+ +NF T LG RV ++++ LFP + RV+TF
Sbjct: 159 SLHNVVLRHDLPDTGNMSEVHPHLIFDNFTTDLGKRVVQILKHLFPPGVKKDSARVITFA 218
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
N+ DFI R H Y+ +T+E L E GPRF ++L
Sbjct: 219 NRGDFISVRQHVYV-KTREG------------------------VELAEVGPRFEMRLYD 253
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L+ GT + K + EW M T+ ++ +L
Sbjct: 254 LRLGTLENKDADVEWRMHGFMRTANKKDYL 283
>gi|294654719|ref|XP_456780.2| DEHA2A10318p [Debaryomyces hansenii CBS767]
gi|218512082|sp|Q6BYD9.2|IMP4_DEBHA RecName: Full=U3 small nucleolar ribonucleoprotein protein IMP4;
Short=U3 snoRNP protein IMP4
gi|199429095|emb|CAG84746.2| DEHA2A10318p [Debaryomyces hansenii CBS767]
Length = 284
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 116/242 (47%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S+ L PK+LITT R S + F E+ + PNS RG Y + ++ ++
Sbjct: 68 DEYSA-LSGISEPKVLITTSRNPSVKLLQFSKEIKLMFPNSIKLNRGNYVITDLVATCQR 126
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+ +I++H +R P +L I P GP+ F L + LR D+ GN + P LV N
Sbjct: 127 VQISDLIILHEHRGIPTSLTISHFPHGPSIIFTLHNVKLRHDLPEIGNSSESYPHLVFEN 186
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F + LG RV ++++ LFP + RV+TF N DFI RHH Y+
Sbjct: 187 FTSELGKRVVKIMKHLFPPGVKKDSSRVITFINNDDFISVRHHMYV-------------- 232
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K KD L E GPRF ++L L+ G D K E EW + + T R+
Sbjct: 233 KTKDT-----------VELSEVGPRFEMRLYELRLGLLDNKDSEVEWQLRRFIRTGNRKN 281
Query: 271 FL 272
+L
Sbjct: 282 YL 283
>gi|47214978|emb|CAG01312.1| unnamed protein product [Tetraodon nigroviridis]
Length = 330
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F E+ + P + RG +++ +++ + + T +++VH
Sbjct: 82 PKVMVTTSRDPSSRLKMFAKEVKLMFPGAQRMNRGNHEIPALVQACRANNVTDLVIVHET 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTA+F L +V+R D+ + G + P L+ +NF ++LG RV +
Sbjct: 142 RGQPDGLVVCHLPFGPTAYFTLYNVVMRHDVPDIGTMSEAFPHLIFHNFTSQLGQRVSNI 201
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RRV+TF NQ DFI FRHH Y +KT
Sbjct: 202 LKYLFP-VPKEDSRRVITFANQEDFISFRHHTY----------------------KKTDH 238
Query: 223 QKVITRLQECGPRFTLK 239
+ + L E GPRF +K
Sbjct: 239 RNI--ELTEVGPRFEMK 253
>gi|356605798|gb|AET24958.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 20 KK-2011]
Length = 189
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 25/207 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S+R F E+ + PNS RG YD+K++++ + +D T +I++
Sbjct: 2 PKIVITTSRDPSSRLKMFSKEMKLIFPNSQRINRGHYDVKQVVQACRAQDTTDLIILTET 61
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD +++ LP GPTA F +S +V+R DI N G + P L+ N ++LG R +
Sbjct: 62 RGNPDGMIVCHLPFGPTAFFSMSNVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGIRFTTI 121
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ +RV+TF N D+I +RHH Y +D G+
Sbjct: 122 LKHLFP-VPKPDSKRVMTFANTDDYISYRHHVY--------KTDEAGE------------ 160
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFD 249
L E GPRF LK ++ GT +
Sbjct: 161 ----VELTEVGPRFELKPYQIKLGTLE 183
>gi|452847357|gb|EME49289.1| hypothetical protein DOTSEDRAFT_163537, partial [Dothistroma
septosporum NZE10]
Length = 295
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 122/259 (47%), Gaps = 32/259 (12%)
Query: 18 RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 77
R DEL D D+ S L P+ LITT R S+R F E+ ++P S RG
Sbjct: 65 RTTQDEL----DLDDEYSYLSGVVDPRPLITTSRDPSSRLATFSKEIKLLLPTSSRINRG 120
Query: 78 TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-- 135
L + + AK T +I++H +R P A+ I P GPTA F L ++LR DI N
Sbjct: 121 NMILPNLADSAKANGITDMILLHEHRGTPTAMTISHFPHGPTASFSLHNVMLRHDIPNSS 180
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHH 193
G + P L+ F T LG RV +++Q LFP + G RVVTF N D I RHH
Sbjct: 181 RGTVSESYPHLIFEGFTTHLGKRVVKILQHLFPPREVSTQLGTRVVTFKNIEDSIEVRHH 240
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGG 253
++ KT Q L E GPR T++ ++ GT ++KGG
Sbjct: 241 VFV----------------------KTGYQSA--ELAEVGPRITMRPFEIRQGTLESKGG 276
Query: 254 EFEWVHKPEMDTSRRRFFL 272
+ EW T++++ +L
Sbjct: 277 DVEWHMNQYTRTAKKKDYL 295
>gi|169608341|ref|XP_001797590.1| hypothetical protein SNOG_07244 [Phaeosphaeria nodorum SN15]
gi|111064775|gb|EAT85895.1| hypothetical protein SNOG_07244 [Phaeosphaeria nodorum SN15]
Length = 295
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 126/259 (48%), Gaps = 32/259 (12%)
Query: 18 RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 77
R ++EL ++ + S ++ P+IL+TT R S+R F E+ ++P + RG
Sbjct: 65 RTAEEELGLDDEYAQLSGVVD----PRILVTTSRDPSSRLGTFAKEIRLLLPTAIRLNRG 120
Query: 78 TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-- 135
L ++ A+ + II++H +R P AL + P GPTA F L +VLR DI N
Sbjct: 121 NLILNNLVSSAQSSGLSDIILLHEHRGTPTALTVSHFPHGPTASFSLHNVVLRADIPNSA 180
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHH 193
G + P L+ F+T+LG RV ++++ LFP + G RVVTF N D I RHH
Sbjct: 181 RGTVSESYPHLIFEGFSTKLGERVVQVLKHLFPPREGTAKVGNRVVTFKNIEDTIEVRHH 240
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGG 253
++ KT Q V L E GPR +++L ++ GT + K G
Sbjct: 241 VFV----------------------KTGYQAV--ELAEVGPRMSMRLFEIRAGTLENKEG 276
Query: 254 EFEWVHKPEMDTSRRRFFL 272
+ EW T R++ +L
Sbjct: 277 DVEWHLNQYTRTGRKKEYL 295
>gi|225683334|gb|EEH21618.1| U3 small nucleolar ribonucleoprotein IMP4 [Paracoccidioides
brasiliensis Pb03]
Length = 304
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 36 ILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 94
+L G P+ LITT R S R F E+ +IP S RG + ++ AK +
Sbjct: 86 VLTSGIVDPRPLITTSRSPSARLSTFAKEMRLLIPTSIRINRGNLVIPDLLASAKASALS 145
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFA 152
+IV+H +R P A+ I LP GPTA F L ++LR DI N G + P L+ F
Sbjct: 146 DMIVLHEHRGTPTAITISHLPHGPTASFSLHNVMLRADIPNSARGTVSESYPHLIFEGFT 205
Query: 153 TRLGHRVGRLIQSLFPQSPEFRGR---RVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
T+LG RV ++++ +FP E G+ RVVTF N D I RHH ++
Sbjct: 206 TKLGARVVKILKHIFPPR-EVNGKLGSRVVTFENIEDSIEVRHHVFV------------- 251
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRR 268
KT Q V L E GPR T+KL ++ GT + GGE EW TSR+
Sbjct: 252 ---------KTGYQSV--ELAEVGPRMTMKLFQIRGGTLEKDSGGELEWALSQYTRTSRK 300
Query: 269 RFFL 272
+ +L
Sbjct: 301 KDYL 304
>gi|145485428|ref|XP_001428722.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395810|emb|CAK61324.1| unnamed protein product [Paramecium tetraurelia]
Length = 287
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+I++TT R S R + E+ + PN RG +K ++ + ++K+++ +I+VH +
Sbjct: 83 PQIVLTTSRSPSQRLVTLMKEMGLIFPNCTRVNRGAQVVKDLVIHCQQKNYSDLIIVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLGHRVGR 161
R EPD L+I +P GPT +F + VLR D+ +P + P L+ +NF+T+LG RV
Sbjct: 143 RGEPDGLIISHMPLGPTIYFGVKNAVLRHDLDVKADPLSEQYPHLIFDNFSTKLGERVTT 202
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFP P+ +RV+TFHN+ I FRHH Y +K+
Sbjct: 203 ILKHLFP-VPKIDSKRVLTFHNENGVIQFRHHTY----------------------QKSF 239
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
Q L E GPRF LK + GT K EW + ++T+ ++ L
Sbjct: 240 NQ---VDLNEQGPRFELKPYKITLGTIGQKEAIVEWQLRTFINTAGKKSVL 287
>gi|356605802|gb|AET24960.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 16 KK-2011]
Length = 182
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 25/204 (12%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT R S+R F E+ + PNS RG YD+K++++ +K +D T +I+ R
Sbjct: 1 VITTSRDPSSRLKMFAKEMKLIFPNSQRINRGHYDVKQVVQASKAQDSTDLIIFTETRGN 60
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
PD +L+ LP GPTA F ++ +V+R DI N G + P L+ +N ++LG R +++
Sbjct: 61 PDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKH 120
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ +R++TF N DF+ FRHH Y ET D + E
Sbjct: 121 LFP-VPKPDSKRIITFSNTDDFLSFRHHVYKTET--------------DGEIE------- 158
Query: 226 ITRLQECGPRFTLKLVSLQHGTFD 249
L E GPRF LK ++ GT +
Sbjct: 159 ---LSEVGPRFELKPYQIKLGTLE 179
>gi|336469951|gb|EGO58113.1| hypothetical protein NEUTE1DRAFT_122405 [Neurospora tetrasperma
FGSC 2508]
gi|350290364|gb|EGZ71578.1| Brix-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 417
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 128/245 (52%), Gaps = 31/245 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT + A ++ ++ PNS Y +R Y +++I ++AK + +T +
Sbjct: 189 PKILVTTHLNGTIHKEA--EDIAAIFPNSTYIRRSAHAYGHKYSVREIAKFAKNRGYTIL 246
Query: 97 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 151
++V + ++P +L +I L GP+ + + + K + HGNPT H
Sbjct: 247 MIVGEDLKKPSSLTVIHLNGEDVAPGPSLTYTIRNYLPGKALLGHGNPTNHY-------- 298
Query: 152 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKK 211
T LG + + ++FP PE GR+VVT HNQRD+IFFR HRY+F +E++ ++ N
Sbjct: 299 -TPLGILAAKSMHTMFPPRPELSGRQVVTLHNQRDYIFFRRHRYVF--REARTTEKNVVT 355
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE----WVHKPEMDTSR 267
A+ + E Q + LQE GPRFTLKL + G G E E W K +M+ R
Sbjct: 356 AEGKEME--GMQGIRAGLQEIGPRFTLKLRRVDKG-IGRAGSEGEDALKWEWKAKMEKVR 412
Query: 268 RRFFL 272
RF L
Sbjct: 413 TRFNL 417
>gi|226286940|gb|EEH42453.1| U3 small nucleolar ribonucleoprotein IMP4 [Paracoccidioides
brasiliensis Pb18]
Length = 309
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 36 ILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 94
+L G P+ LITT R S R F E+ +IP S RG + ++ AK +
Sbjct: 91 VLTSGIVDPRPLITTSRSPSARLSTFAKEMRLLIPTSIRINRGNLVIPDLLASAKASALS 150
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFA 152
+IV+H +R P A+ I LP GPTA F L ++LR DI N G + P L+ F
Sbjct: 151 DMIVLHEHRGTPTAITISHLPHGPTASFSLHNVMLRADIPNSARGTVSESYPHLIFEGFT 210
Query: 153 TRLGHRVGRLIQSLFPQSPEFRGR---RVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
T+LG RV ++++ +FP E G+ RVVTF N D I RHH ++
Sbjct: 211 TKLGARVVKILKHIFPPR-EVNGKLGSRVVTFENIEDSIEVRHHVFV------------- 256
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRR 268
KT Q V L E GPR T+KL ++ GT + GGE EW TSR+
Sbjct: 257 ---------KTGYQSV--ELAEVGPRMTMKLFQIRGGTLEKDSGGELEWALSQYTRTSRK 305
Query: 269 RFFL 272
+ +L
Sbjct: 306 KDYL 309
>gi|295657688|ref|XP_002789410.1| U3 small nucleolar ribonucleoprotein IMP4 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283832|gb|EEH39398.1| U3 small nucleolar ribonucleoprotein IMP4 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 309
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 118/243 (48%), Gaps = 30/243 (12%)
Query: 36 ILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFT 94
+L G P+ LITT R S R F E+ +IP S RG + ++ AK +
Sbjct: 91 VLTSGIVDPRPLITTSRSPSARLSTFAKEMRLLIPTSIRINRGNLVISDLLASAKASALS 150
Query: 95 SIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFA 152
+I++H +R P A+ I LP GPTA F L ++LR DI N G + P L+ F
Sbjct: 151 DMIILHEHRGTPTAITISHLPHGPTASFSLHNVMLRADIPNSARGTVSESYPHLIFEGFT 210
Query: 153 TRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
T+LG RV ++++ +FP ++ G RVVTF N D I RHH ++
Sbjct: 211 TKLGARVVKILKHIFPPREANGKLGSRVVTFENIEDSIEVRHHVFV-------------- 256
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRR 269
KT Q V L E GPR T++L ++ GT + GGE EW TSR++
Sbjct: 257 --------KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGELEWALSQYTRTSRKK 306
Query: 270 FFL 272
+L
Sbjct: 307 DYL 309
>gi|448526232|ref|XP_003869302.1| Imp4 SSU processome component [Candida orthopsilosis Co 90-125]
gi|380353655|emb|CCG23166.1| Imp4 SSU processome component [Candida orthopsilosis]
Length = 285
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S L PK++ITT R S R F E+ + PNS RG Y + +++
Sbjct: 67 DIDDEYSALSGISDPKVVITTSRDPSVRLLQFSKEIKLMFPNSLKLNRGNYIINDLVKTC 126
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 148
+ + +I++H +R P +L + P GPTA F L + LR D+ N GN + P L+
Sbjct: 127 TRVQVSDLIILHEHRGVPTSLTVSHFPHGPTAIFTLHNVKLRHDLPNLGNISESYPHLIF 186
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NF T LG RV +++Q LFP + RV+TF N D+I RHH Y+ T++S
Sbjct: 187 ENFNTPLGKRVVKILQHLFPPGVKRDSSRVITFVNNDDYISVRHHVYV-RTRDS------ 239
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
+ E GPRF +KL ++ G D + EW + + T+ R
Sbjct: 240 ------------------VEISEIGPRFEMKLYEIRLGLADNTDADVEWQVRRFIRTANR 281
Query: 269 RFFL 272
+ +L
Sbjct: 282 KNYL 285
>gi|296816785|ref|XP_002848729.1| U3 small nucleolar ribonucleoprotein IMP4 [Arthroderma otae CBS
113480]
gi|238839182|gb|EEQ28844.1| U3 small nucleolar ribonucleoprotein IMP4 [Arthroderma otae CBS
113480]
Length = 299
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 119/248 (47%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 76 DIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPTSIRLNRGTLVLNDLVASA 135
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ +++VH +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 136 TASALSDMVIVHEHRGTPTAITISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 195
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F T+LG RV +++ LFP + G RVVTF N D I RHH ++
Sbjct: 196 IFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDSIEVRHHVFV--------- 246
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GG+ EW
Sbjct: 247 -------------KTGYQDV--ELAEVGPRMTMRLFEIRGGTLEKGAGGDVEWALTQYTR 291
Query: 265 TSRRRFFL 272
TS+++ +L
Sbjct: 292 TSKKKDYL 299
>gi|118377128|ref|XP_001021746.1| Brix domain containing protein [Tetrahymena thermophila]
gi|89303512|gb|EAS01500.1| Brix domain containing protein [Tetrahymena thermophila SB210]
Length = 289
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 119/241 (49%), Gaps = 29/241 (12%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+++ + P ILITT R S R F EL+S PNS RG +K++ Y +
Sbjct: 73 DEYAT--AEYREPMILITTSRDPSPRLVNFQKELVSFFPNSERMNRGQTVVKELSRYCIQ 130
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVL 148
K+ T ++++H +R EPD ++I P GPT + + +VLR D+K + P L+
Sbjct: 131 KNVTDLVILHEHRGEPDGMIITHFPLGPTLYLGIKNVVLRHDLKTEKLDAVSKQNPHLIF 190
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NNF + LG R+ +++ LFP P+ ++V+TF N D I RHH + + + K D
Sbjct: 191 NNFNSPLGERITSILKHLFP-VPKHDSKKVITFSNNSDLISVRHH--VHDKVDYKTVD-- 245
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
L E GPRF LK + GT D EWV +P M+T+
Sbjct: 246 --------------------LIELGPRFELKPYQISLGTLDQTEATKEWVLRPYMNTATT 285
Query: 269 R 269
R
Sbjct: 286 R 286
>gi|393244845|gb|EJD52356.1| Brix-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 288
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 27/232 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S++ F E+ V PN+ RG Y +K++ + + T ++V+H +
Sbjct: 82 PKIIITTSRDPSSKLLQFAKEMRLVFPNATRLNRGNYVVKELAAACRANEITDLVVLHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI--KNHGNPTGHIPELVLNNFATRLGHRVG 160
R PDAL++ P GPT +F L + LR D+ G + P L+ ++F++ LG RV
Sbjct: 142 RGIPDALILSHFPHGPTIYFTLHNVSLRHDLPASARGTVSEAYPHLIFSDFSSALGARVR 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ FP P+ +RV+TF N+ DFI FRHH ++ KT
Sbjct: 202 DILKYCFP-VPKEDSKRVMTFANEGDFISFRHHVFV----------------------KT 238
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
S + V +L E GPRF +K ++ GT + + EWV T+++R FL
Sbjct: 239 SHKDV--QLAEVGPRFEMKPYEIRLGTLEQAEADKEWVLSHYSRTAKKRRFL 288
>gi|68483743|ref|XP_714230.1| likely U3 snoRNP ribosomal biogenesis factor IMP4p [Candida
albicans SC5314]
gi|68483830|ref|XP_714190.1| likely U3 snoRNP ribosomal biogenesis factor IMP4p [Candida
albicans SC5314]
gi|46435731|gb|EAK95107.1| likely U3 snoRNP ribosomal biogenesis factor IMP4p [Candida
albicans SC5314]
gi|46435778|gb|EAK95153.1| likely U3 snoRNP ribosomal biogenesis factor IMP4p [Candida
albicans SC5314]
gi|238880200|gb|EEQ43838.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Candida albicans
WO-1]
Length = 283
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S L PK++ITT R S + F E+ + PNS RG Y + ++ +
Sbjct: 68 DEYSR-LSGISDPKVVITTSRDPSVKLLQFSKEIKLMFPNSLKLNRGNYIISDLVSTCNR 126
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+ +I++H +R P +L + P GPTA F L + LR D+ N GN + P L+ N
Sbjct: 127 VQVSDMILLHEHRGVPSSLTVSHFPHGPTAIFTLHNVKLRHDLPNLGNVSESYPHLIFEN 186
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F + LG RV +++Q LFP + RV+TF N D+I RHH Y+
Sbjct: 187 FQSDLGKRVVKILQHLFPPGVKKDSSRVITFVNNDDYISVRHHVYV-------------- 232
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K KD+ L E GPRF ++L ++ G D K + EW + + T+ R+
Sbjct: 233 KTKDS-----------VELSEIGPRFEMRLYEIRLGLPDNKDADVEWQMRRFIRTANRKN 281
Query: 271 FL 272
+L
Sbjct: 282 YL 283
>gi|356605808|gb|AET24963.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 10 KK-2011]
Length = 178
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 23/201 (11%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT R S+R F E+ + PN+ RG YD+K++++ K +D T +I+ R
Sbjct: 1 VITTSRDPSSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIIFTETRGN 60
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
PD +L+ LP GPTA F ++ +V+R DI N G + P L+ +N ++LG R +++
Sbjct: 61 PDGMLVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKH 120
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ +R++TF N DFI FRHH Y +T ANG + +
Sbjct: 121 LFP-VPKPDSKRIITFSNSDDFISFRHHVYKIDT-------ANGGEIE------------ 160
Query: 226 ITRLQECGPRFTLKLVSLQHG 246
L E GPRF LK ++ G
Sbjct: 161 ---LTEAGPRFXLKPYQIKLG 178
>gi|241959158|ref|XP_002422298.1| U3 small nucleolar ribonucleoprotein, putative; U3 snoRNP protein,
putative [Candida dubliniensis CD36]
gi|223645643|emb|CAX40304.1| U3 small nucleolar ribonucleoprotein, putative [Candida
dubliniensis CD36]
Length = 283
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 26/242 (10%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S L PK++ITT R S + F E+ + PNS RG Y + ++ +
Sbjct: 68 DEYSR-LSGISDPKVVITTSRDPSVKLLQFSKEIKLMFPNSLKLNRGNYIISDLVSTCNR 126
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNN 150
+ +I++H +R P ++ + P GPTA F L + LR D+ N GN + P L+ N
Sbjct: 127 VQVSDMIILHEHRGVPSSITVSHFPHGPTAIFTLHNVKLRHDLPNLGNVSESYPHLIFEN 186
Query: 151 FATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
F + LG RV +++Q LFP + RV+TF N D+I RHH Y+
Sbjct: 187 FQSDLGKRVVKILQHLFPPGVKKDSSRVITFVNNDDYISVRHHVYV-------------- 232
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
K KD+ L E GPRF ++L ++ G D K + EW + + T+ R+
Sbjct: 233 KTKDS-----------VELSEIGPRFEMRLYEIRLGLPDNKDADVEWQMRRFIRTANRKN 281
Query: 271 FL 272
+L
Sbjct: 282 YL 283
>gi|398411711|ref|XP_003857193.1| hypothetical protein MYCGRDRAFT_66663, partial [Zymoseptoria
tritici IPO323]
gi|339477078|gb|EGP92169.1| hypothetical protein MYCGRDRAFT_66663 [Zymoseptoria tritici IPO323]
Length = 295
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 116/234 (49%), Gaps = 28/234 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++L+TT R S+R +F E+ ++P S RG L ++ AK + +I++H +
Sbjct: 86 PRVLVTTSRDPSSRLASFAKEIRLLLPTSIRLNRGNLVLPNLVGSAKSSGLSDLILLHEH 145
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 160
R P A+ + P GPTA F L +VLR DI N G + P L+ F T LG RV
Sbjct: 146 RGTPTAMTVSHFPHGPTASFSLHNVVLRHDIPNASRGTVSESYPHLIFEGFTTPLGRRVV 205
Query: 161 RLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSE 218
+++Q LFP + G RVVTF N D I RHH ++
Sbjct: 206 KILQHLFPPREGGTKLGSRVVTFKNIEDSIEVRHHVFV---------------------- 243
Query: 219 KTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
KT+ Q V L E GPR T++L ++ GT + K G+ EW TS+++ +L
Sbjct: 244 KTAYQSV--ELAEVGPRMTMRLFEIRQGTAENKDGDVEWHMNQYTRTSKKKDYL 295
>gi|354545941|emb|CCE42670.1| hypothetical protein CPAR2_203130 [Candida parapsilosis]
Length = 285
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S L PK++ITT R S R F E+ + PNS RG Y + +++
Sbjct: 67 DIDDEYSALSGISDPKVVITTSRDPSVRLLQFSKEIKLMFPNSLKLNRGNYIINDLVKTC 126
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 148
+ + +I++H +R P +L + P GPTA F L + LR D+ N GN + P L+
Sbjct: 127 TRVQVSDLIILHEHRGVPTSLTVSHFPHGPTAIFTLHNVKLRHDLPNLGNISESYPHLIF 186
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NF T LG RV +++Q LFP + RV+TF N D+I RHH Y+ T++S
Sbjct: 187 ENFNTPLGKRVVKILQHLFPPGVKRDSSRVITFVNNDDYISVRHHIYV-RTRDS------ 239
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
+ E GPRF +KL ++ G D + EW + + T+ R
Sbjct: 240 ------------------VEVSEIGPRFEMKLYEIRLGLADNTDADVEWQVRRFIRTANR 281
Query: 269 RFFL 272
+ +L
Sbjct: 282 KNYL 285
>gi|380483298|emb|CCF40706.1| brix domain-containing protein [Colletotrichum higginsianum]
Length = 298
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S+L P++L+TT R S+R AF E+ ++P S RG L +++
Sbjct: 72 DLDDEYSMLSGVSEPRVLVTTSRDCSSRLAAFSKEIRLLLPTSVRLNRGNLILPDLVQSC 131
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
K T ++++H +R P AL I LP GPT F L +VLR DI G+ + P L
Sbjct: 132 KSNALTDLVLLHEHRGNPTALTISHLPHGPTVSFSLHNVVLRHDIPGSIRGSVSEAYPHL 191
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ F +RLG R+ ++++ LFP S G RVVTF N D I RHH ++
Sbjct: 192 IFEGFKSRLGQRIVKVLKHLFPPRDPISSRSKIGNRVVTFLNNEDSIEVRHHVFV----- 246
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+TS V L E GPR T++ ++ GT D+K G+ EW
Sbjct: 247 -----------------RTSYDSV--ELAEVGPRMTMRPFEIRGGTLDSKEGDVEWHLTH 287
Query: 262 EMDTSRRRFFL 272
T R++ +L
Sbjct: 288 YTRTGRKKEYL 298
>gi|365987946|ref|XP_003670804.1| hypothetical protein NDAI_0F02430 [Naumovozyma dairenensis CBS 421]
gi|343769575|emb|CCD25561.1| hypothetical protein NDAI_0F02430 [Naumovozyma dairenensis CBS 421]
Length = 289
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 29/260 (11%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
D++ D +EL ++ S I++ P+I+++T R S R F E+ + PN+
Sbjct: 59 DQSHPDADKEELEIDDEYSHTSGIVE----PRIIVSTSRDPSTRLSQFAKEIKLLFPNAV 114
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG Y + ++ + +I++H +R P +L + P GPTA+F L +VLR D
Sbjct: 115 RLNRGNYVMPNLVSACINSGTSDLIILHEHRGVPTSLTVSHFPHGPTAYFSLHNVVLRHD 174
Query: 133 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
I N GN + P L+ +NF T LG RV +++ LF + RV+TF N+ DFI R
Sbjct: 175 ILNAGNQSEVNPHLIFDNFTTDLGKRVVTILKHLFAPGVKVDSSRVITFANRGDFISVRQ 234
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
H Y+ K +D + E GPRF ++L L+ GT + K
Sbjct: 235 HVYV--------------KTRDG-----------VEMAEVGPRFEMRLYELRLGTLENKD 269
Query: 253 GEFEWVHKPEMDTSRRRFFL 272
+ EW + + T+ R+ +L
Sbjct: 270 ADVEWQLRRFVRTAGRKDYL 289
>gi|156846454|ref|XP_001646114.1| hypothetical protein Kpol_1039p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156116787|gb|EDO18256.1| hypothetical protein Kpol_1039p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 288
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 25/230 (10%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++++TT R S R F E+ + P + RG Y + +++ + + ++V+H +
Sbjct: 84 PRVIVTTSRDPSTRLSQFAKEIKLLFPGAVRLNRGNYIMPNLVKACVRSGTSDLVVLHEH 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P ++ I P GPTA F L +VLR DI N GN + P L+ +NF T LG R+ ++
Sbjct: 144 RGVPTSITISHFPHGPTAFFTLHNVVLRHDILNRGNQSEVNPHLIFDNFTTPLGERIVKV 203
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF N+ D+I R H Y+ +T+E
Sbjct: 204 LKHLFPPGPKKDASRVITFANRGDYISVRQHVYV-KTREG-------------------- 242
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ E GPRF ++L L+ GT + K + EW + + T+ R+ +L
Sbjct: 243 ----VEVAEVGPRFEMRLFELRLGTLENKDADVEWKLRRFVRTAGRKDYL 288
>gi|240277172|gb|EER40681.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces capsulatus
H143]
gi|325093994|gb|EGC47304.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces capsulatus
H88]
Length = 324
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 121/248 (48%), Gaps = 32/248 (12%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+ +L G P+ LITT R S R F E+ +IP S RG + ++ AK
Sbjct: 103 DEY--VLTSGIVDPRPLITTSRSPSTRLSTFAKEMRLLIPTSIRINRGNIVIPDLVASAK 160
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELV 147
+ +I++H +R P A+ + LP GPTA F L ++LR DI N G + P L+
Sbjct: 161 TSALSDMIILHEHRGTPTAITVSHLPHGPTASFSLHNVMLRADIPNSARGTVSESYPHLI 220
Query: 148 LNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
F T+LG RV ++++ +FP ++ G RVVTF N D I RHH ++
Sbjct: 221 FEGFTTKLGARVVKILKHIFPPREANGKLGSRVVTFKNIEDSIEVRHHVFV--------- 271
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GGE EW
Sbjct: 272 -------------KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGEIEWSLNQYTR 316
Query: 265 TSRRRFFL 272
TSR++ +L
Sbjct: 317 TSRKKDYL 324
>gi|356605822|gb|AET24970.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis plicata]
Length = 181
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 25/204 (12%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT S+R AF E+ + PNS RG YD+K++++ + +D +IV+ R
Sbjct: 1 VITTSHDPSSRLKAFSKEMKLIFPNSQRINRGHYDIKQLVQACRAQDTXDLIVLTETRGN 60
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
PD +++ LP GPTA+F ++ +V+R DI N G + P+L+ N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAYFNMTNVVMRHDIPNCGTMSEQYPQLIFNKLDSKLGIRFTTILKH 120
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ RRV+TF N DFI FRHH +F+T DA+G+
Sbjct: 121 LFP-VPKPDSRRVMTFANTNDFISFRHH--VFKT------DADGE--------------- 156
Query: 226 ITRLQECGPRFTLKLVSLQHGTFD 249
L E GPRF LK ++ GT +
Sbjct: 157 -IELTEVGPRFELKPYQIKLGTLE 179
>gi|156065923|ref|XP_001598883.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154691831|gb|EDN91569.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 326
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 38/266 (14%)
Query: 17 CRPD---DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
RPD ++EL ++ + S I+ P++L+TT R S+R AF E+ +IP S
Sbjct: 61 SRPDLTANEELDLDDEYAQLSGIVD----PRVLVTTSRDPSSRLSAFAKEIRLLIPTSIR 116
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG L +I A+ + II++H +R P AL + P GPT F L +VLR DI
Sbjct: 117 LNRGNLILPNLITSAQASGLSDIILLHEHRGTPTALTLSHFPHGPTISFSLHNVVLRHDI 176
Query: 134 KN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRD 186
N G + P L+ F +RLG R+ ++++ +FP G RVVTF N D
Sbjct: 177 PNSSRGTVSESYPHLIFEGFTSRLGLRIVKILKHIFPPREAITNKTKIGNRVVTFKNIED 236
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
I RHH ++ KT Q V L E GPR T++ ++ G
Sbjct: 237 SIEVRHHVFV----------------------KTGYQSV--ELAEVGPRMTMRCFEIRGG 272
Query: 247 TFDTKGGEFEWVHKPEMDTSRRRFFL 272
T + K G+ EW TS+++ +L
Sbjct: 273 TLENKDGDVEWRMNQYTRTSKKKDYL 298
>gi|154305572|ref|XP_001553188.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347828533|emb|CCD44230.1| similar to U3 small nucleolar ribonucleoprotein protein IMP4
[Botryotinia fuckeliana]
Length = 298
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 126/266 (47%), Gaps = 38/266 (14%)
Query: 17 CRPD---DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
RPD ++EL ++ + S I+ P++LITT R S+R AF E+ +IP S
Sbjct: 61 SRPDLTANEELDLDDEYAQLSGIVD----PRVLITTSRDPSSRLSAFAKEIRLLIPTSIR 116
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG L +I A+ + II++H +R P AL + P GPT F L +VLR DI
Sbjct: 117 LNRGNLILPSLITSAQASGLSDIILLHEHRGTPTALTLSHFPHGPTISFSLHNVVLRHDI 176
Query: 134 KN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRD 186
N G + P L+ F +RLG R+ ++++ +FP G RVVTF N D
Sbjct: 177 PNSSRGTVSESYPHLIFEGFTSRLGLRIVKILKHIFPPREAITNKTKIGSRVVTFKNIED 236
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
I RHH ++ KT Q V L E GPR T++ ++ G
Sbjct: 237 SIEVRHHVFV----------------------KTGYQNV--ELAEVGPRMTMRCFEIRGG 272
Query: 247 TFDTKGGEFEWVHKPEMDTSRRRFFL 272
T + K G+ EW TS+++ +L
Sbjct: 273 TLENKDGDVEWRMNQYTRTSKKKDYL 298
>gi|299747504|ref|XP_002911179.1| brix domain-containing protein [Coprinopsis cinerea okayama7#130]
gi|298407549|gb|EFI27685.1| brix domain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 202
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 28/208 (13%)
Query: 67 VIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSK 126
V PNSH RG Y +K++ + + D T +IV+H +R PDA+++ P GPT +F L+
Sbjct: 4 VFPNSHRVNRGNYVVKELADACRANDVTDLIVLHEHRGVPDAMIVSHFPHGPTVYFTLNN 63
Query: 127 LVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ 184
+ LR DI ++ N T P L+ NF+++LG RV +++ LFP P+ +RV+TF N+
Sbjct: 64 VTLRHDITSYKNSTVSEQYPHLIFENFSSKLGERVRDVLKYLFP-VPKEDSKRVMTFANE 122
Query: 185 RDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 244
DFI FRHH ++ K +D + L E GPR +K ++
Sbjct: 123 SDFISFRHHVFV-------------KTGRDVQ------------LAEVGPRLEMKPYEIR 157
Query: 245 HGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
GT + E EWV T+++R L
Sbjct: 158 QGTIEQTEAEKEWVLSHYTRTAKKRSVL 185
>gi|225558218|gb|EEH06502.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces capsulatus
G186AR]
Length = 324
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 121/248 (48%), Gaps = 32/248 (12%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+ +L G P+ LITT R S R F E+ +IP S RG + ++ AK
Sbjct: 103 DEY--VLTSGIVDPRPLITTSRSPSTRLSTFAKEMRLLIPTSIRINRGNIVIPDLLASAK 160
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELV 147
+ +I++H +R P A+ + LP GPTA F L ++LR DI N G + P L+
Sbjct: 161 TSALSDMIILHEHRGTPTAITVSHLPHGPTASFSLHNVMLRADIPNSARGTVSESYPHLI 220
Query: 148 LNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
F T+LG RV ++++ +FP ++ G RVVTF N D I RHH ++
Sbjct: 221 FEGFTTKLGARVVKILKHIFPPREANGKLGSRVVTFKNIEDSIEVRHHVFV--------- 271
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GGE EW
Sbjct: 272 -------------KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGEIEWSLNQYTR 316
Query: 265 TSRRRFFL 272
TSR++ +L
Sbjct: 317 TSRKKDYL 324
>gi|154285818|ref|XP_001543704.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Ajellomyces
capsulatus NAm1]
gi|150407345|gb|EDN02886.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Ajellomyces
capsulatus NAm1]
Length = 315
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 121/248 (48%), Gaps = 32/248 (12%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+ +L G P+ LITT R S R F E+ +IP S RG + ++ AK
Sbjct: 94 DEY--VLTSGIVDPRPLITTSRSPSTRLSTFAKEMRLLIPTSIRINRGNIVIPDLLASAK 151
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELV 147
+ +I++H +R P A+ + LP GPTA F L ++LR DI N G + P L+
Sbjct: 152 TSALSDMIILHEHRGTPTAITVSHLPHGPTASFSLHNVMLRADIPNSARGTVSESYPHLI 211
Query: 148 LNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
F T+LG RV ++++ +FP ++ G RVVTF N D I RHH ++
Sbjct: 212 FEGFTTKLGARVVKILKHIFPPREANGKLGSRVVTFKNIEDSIEVRHHVFV--------- 262
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GGE EW
Sbjct: 263 -------------KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGEIEWSLNQYTR 307
Query: 265 TSRRRFFL 272
TSR++ +L
Sbjct: 308 TSRKKDYL 315
>gi|349806195|gb|AEQ18570.1| putative u3 small nucleolar [Hymenochirus curtipes]
Length = 217
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S+R F EL + PN+ RG +++ +++ +K D T +++VH +
Sbjct: 43 PKIMVTTSRDPSSRLKMFAKELRLIFPNAQRMNRGNHEVSALVQASKANDVTDLLIVHEH 102
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F L +V+R DI + G + P L+ +NF +RLG RV +
Sbjct: 103 RGMPDGLIVCHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAFPHLIFHNFTSRLGQRVSNI 162
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
++ LFP P+ +RVVTF NQ D+I F +
Sbjct: 163 MKYLFP-VPKDDSKRVVTFANQDDYISFLY 191
>gi|378756370|gb|EHY66394.1| hypothetical protein NERG_00034 [Nematocida sp. 1 ERTm2]
Length = 340
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 130/255 (50%), Gaps = 38/255 (14%)
Query: 22 DELFA---GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 78
D ++A G DEFS + +ITT R S+ F L +++PN+ RG
Sbjct: 65 DAIYAFEDGEKEDEFS-----HTEARPIITTSRSPSDSLIRFAKSLKNILPNAEKLNRGK 119
Query: 79 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 138
+ ++++++ A KK+ T +I+V+ NR P +L+I LP GPT +F + +I
Sbjct: 120 HMIQELVQSAIKKNHTDLIMVNENRGVPSSLIISHLPHGPTTYFSIH----HPNIDTEEP 175
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP-EFRGRRVVTFHNQRDFIFFRHHRYIF 197
+ IP ++ +NF T LG RV R++ SLFPQ P + +R+++F N+ D I F + F
Sbjct: 176 ISTAIPAVIFDNFTTPLGMRVKRILSSLFPQLPGSEKPKRMISFINREDSILFTQFKSTF 235
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
QK LQ+ P+FT+KL ++ GT D E E+
Sbjct: 236 -------------------------QKGEVTLQKTSPQFTMKLYEIRAGTLDMTYAEKEF 270
Query: 258 VHKPEMDTSRRRFFL 272
V +P ++T+R++F+L
Sbjct: 271 VFRPYLNTARKKFYL 285
>gi|242774713|ref|XP_002478496.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Talaromyces stipitatus ATCC 10500]
gi|218722115|gb|EED21533.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Talaromyces stipitatus ATCC 10500]
Length = 302
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 21 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 80
DDE D D+ ++ P+ L+TT R S R F E+ ++P S RG
Sbjct: 73 DDEFM---DVDDEYALTSGLVDPRPLVTTSRSPSARLSTFAKEIRLLLPTSIRLNRGNLV 129
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI--KNHGN 138
L ++ A T ++++H +R P A+ I LP GPTA F L ++LR DI + G
Sbjct: 130 LPDLVSSANAAALTDMVLLHEHRGTPTAITISHLPHGPTASFSLHNVMLRADIPDSSRGT 189
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYI 196
+ P L+ F T+LG RV ++++ LFP + G RVVTF N+ D I RHH ++
Sbjct: 190 VSESYPHLIFEGFTTKLGKRVVQILKHLFPPREGGGKLGNRVVTFRNREDAIEVRHHVFV 249
Query: 197 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEF 255
KT Q V L E GPR T++L ++ GT + GG+
Sbjct: 250 ----------------------KTGYQDV--ELAEVGPRMTMRLFEIRGGTLEKNAGGDV 285
Query: 256 EWVHKPEMDTSRRRFFL 272
EW TSR++ +L
Sbjct: 286 EWALTQYTRTSRKKDYL 302
>gi|425767682|gb|EKV06248.1| Imp4 protein, putative [Penicillium digitatum PHI26]
gi|425780377|gb|EKV18384.1| Imp4 protein, putative [Penicillium digitatum Pd1]
Length = 293
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 31/247 (12%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+ +L G P+ L+TT R S R AF E+ ++P S RGT L ++ A
Sbjct: 73 DEY--VLTSGIIDPRPLVTTSRSPSARLGAFAKEIRLLLPTSIRLNRGTLVLGDLVSSAT 130
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELV 147
T +I++H +R P AL I LP GPTA F L +VLR+DI N G + P LV
Sbjct: 131 SAALTDMILLHEHRGTPTALTISHLPHGPTASFSLHNVVLRQDIPNAARGTVSESYPHLV 190
Query: 148 LNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
F T+LG RV ++++ LFP + G RVVTF N+ D I RHH ++
Sbjct: 191 FEGFKTKLGARVVQILKHLFPPRETGKVGNRVVTFVNKEDNIEVRHHVFV---------- 240
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDT 265
KT + V L E GPR T++L ++ GT + G+ EW T
Sbjct: 241 ------------KTGYRDV--ELAEVGPRMTMRLFEIRGGTMEKGSSGDIEWALTQYTRT 286
Query: 266 SRRRFFL 272
S+++ +L
Sbjct: 287 SKKKEYL 293
>gi|449018591|dbj|BAM81993.1| probable U3 snoRNP component Imp4p [Cyanidioschyzon merolae strain
10D]
Length = 344
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 134/262 (51%), Gaps = 29/262 (11%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+++ G A PKI+ITT R S+R F E+ + PN+ RG LK +IE +
Sbjct: 84 DEYAT---AGVADPKIVITTSRNPSSRLCQFAKEVRFLFPNAQRLNRGNLILKDLIELGR 140
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI------KNHGNPTGHI 143
+ T ++++H R EPDAL++ LP GPTA+F LS +V+R D+ ++ +P +
Sbjct: 141 AQQLTDLVLLHETRGEPDALIVCHLPLGPTAYFALSNVVMRHDVAEMLRHEHQNSPDAAL 200
Query: 144 PEL--------VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQ--RDFIFFRHH 193
P L +F +RLG RV +++ LFP P+ +R+V F ++ + FRH
Sbjct: 201 PPLSEAYPHVIFEGSFQSRLGMRVKNMLRFLFP-VPKPDSKRIVAFIDKGYDGILSFRH- 258
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVI------TRLQECGPRFTLKLVSLQHGT 247
YI E + + +D + + + +S I L E GPRF L L ++ GT
Sbjct: 259 -YIVERRRTAAADDSSDDEEAGTATASSSAGRIQGHQQHQALIELGPRFDLGLFRIRLGT 317
Query: 248 FDTKGGEFEWVHKPEMDTSRRR 269
+ + + EW P ++R+R
Sbjct: 318 LEQQDADDEWRLAPYTRSARKR 339
>gi|336373645|gb|EGO01983.1| hypothetical protein SERLA73DRAFT_120635 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386461|gb|EGO27607.1| hypothetical protein SERLADRAFT_461381 [Serpula lacrymans var.
lacrymans S7.9]
Length = 288
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 115/232 (49%), Gaps = 28/232 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S++ F E+ V PNS RG Y +K + E + + T +IV+H +
Sbjct: 82 PKIVITTSRDPSSKLLQFAKEIRLVFPNSSRINRGNYVMKDLAEACRANNITDLIVLHEH 141
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT +F L + LR DI + T P L+ F ++LG R+
Sbjct: 142 RGVPDAMIVSHFPYGPTVYFTLHGVSLRHDIATFKSSTVSEQYPHLIFEKFDSKLGKRIQ 201
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP + E +RV+TF N+ D I FRHH + AK +
Sbjct: 202 DVLKYLFPVAKE-DSKRVMTFSNEDDCISFRHHVF-------------------AKIPRE 241
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
Q L E GPRF +K ++ GT + E EWV T+++R L
Sbjct: 242 VQ------LAEVGPRFEMKPYEIRQGTLEQSEAEREWVLSHYTRTAKKRSLL 287
>gi|150866341|ref|XP_001385902.2| hypothetical protein PICST_90419 [Scheffersomyces stipitis CBS
6054]
gi|149387597|gb|ABN67873.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 283
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 28/243 (11%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+S++ G A PK++ITT R S + F E+ + PNS RG Y + ++++
Sbjct: 68 DEYSTL--SGIADPKVIITTSRDPSVKLLQFSKEVKLMFPNSLKLNRGNYVIPELVKTCS 125
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLN 149
+ + +I++H +R P +L + P GP+A F L + LR D+ GN + P L+
Sbjct: 126 RVQISDLIILHEHRGVPTSLTVSHFPHGPSAIFTLHNVKLRHDLPQLGNVSESYPHLIFE 185
Query: 150 NFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
NF T LG RV +++ LFP + RV+TF N D+I RHH Y+
Sbjct: 186 NFTTGLGKRVETILKHLFPPGVKKDSSRVITFVNNDDYISVRHHVYV------------- 232
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
K KD L E GPRF ++L ++ G D K + EW + + T+ R+
Sbjct: 233 -KTKDG-----------VELSEIGPRFEMRLYEIRLGLPDNKNADVEWQLRRFIRTANRK 280
Query: 270 FFL 272
+L
Sbjct: 281 NYL 283
>gi|85101912|ref|XP_961234.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Neurospora
crassa OR74A]
gi|11595521|emb|CAC18315.1| probable component of the U3 small nucleolar ribonucleoprotein
[Neurospora crassa]
gi|28922776|gb|EAA31998.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Neurospora
crassa OR74A]
Length = 295
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 119/250 (47%), Gaps = 32/250 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S L P+IL+TT R S+R F E+ ++P S RG L+ ++ A
Sbjct: 70 DIDDEYSELSGVIDPRILVTTSRDPSSRLGQFSKEIRLLLPTSVRLNRGNLVLEDLVGAA 129
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 146
K ++ T ++++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 130 KAQNLTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVSESYPRL 189
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ F+T+LG RV ++++ LFP Q P G RV+TF N D I RHH Y+
Sbjct: 190 IFEGFSTKLGERVVKILKHLFPPREPTQKPNV-GNRVITFVNNDDTIEVRHHVYV----- 243
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+TS V L E GPRFT+K + GT D K + EW
Sbjct: 244 -----------------RTSYDSV--ELSEVGPRFTMKPFKITMGTLDNKDADTEWHLSQ 284
Query: 262 EMDTSRRRFF 271
TSR++ +
Sbjct: 285 YTRTSRKKNY 294
>gi|261201592|ref|XP_002628010.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces dermatitidis
SLH14081]
gi|239590107|gb|EEQ72688.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces dermatitidis
SLH14081]
gi|239611817|gb|EEQ88804.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces dermatitidis
ER-3]
gi|327352929|gb|EGE81786.1| U3 small nucleolar ribonucleoprotein IMP4 [Ajellomyces dermatitidis
ATCC 18188]
Length = 304
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 29/249 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ LITT R S R F E+ +IP S RG + ++ A
Sbjct: 80 DLDDEYALTSGIVDPRPLITTSRSPSARLSTFAKEMRLLIPTSIRINRGNLVIPDLLASA 139
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
K + +I++H +R P A+ + LP GPTA F L ++LR DI N G + P L
Sbjct: 140 KASALSDMILLHEHRGTPTAITVSHLPYGPTASFSLHNVMLRADIPNSARGTVSESYPHL 199
Query: 147 VLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKG 204
+ F T+LG RV ++++ +FP ++ G RVVTF N D I RHH ++
Sbjct: 200 IFEGFTTKLGARVVQILKHIFPPREANGKLGSRVVTFKNIEDSIEVRHHVFV-------- 251
Query: 205 SDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEM 263
KT Q V L E GPR T++L ++ GT + GGE EW
Sbjct: 252 --------------KTGYQSV--ELAEVGPRMTMRLFQIRGGTLEKDSGGEVEWALSQYT 295
Query: 264 DTSRRRFFL 272
TSR++ +L
Sbjct: 296 RTSRKKDYL 304
>gi|303320093|ref|XP_003070046.1| Brix domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109732|gb|EER27901.1| Brix domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320031875|gb|EFW13832.1| U3 small nucleolar ribonucleoprotein IMP4 [Coccidioides posadasii
str. Silveira]
Length = 303
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 120/248 (48%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 80 DIDDEYAVTSGLVDPRPLVTTSRSPSSRLSTFAKEIRLLLPTSIRLNRGTLVLPDLVASA 139
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
T ++++H +R P A+ I LP GPTA F + +VLR DI N G + P L
Sbjct: 140 NAAALTDMVLLHEHRGTPTAITISHLPHGPTASFSIHNVVLRADIPNAARGTVSESYPHL 199
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F T+LG RV ++++ LFP + G RVVTF N D I RHH ++
Sbjct: 200 IFEGFKTKLGMRVVQILKHLFPPREAGKVGSRVVTFKNIDDSIEVRHHVFV--------- 250
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT + V L E GPR T++L ++ GT + GG+ EW
Sbjct: 251 -------------KTGYRDV--ELAEVGPRMTMRLFEIRGGTLEKGAGGDVEWALTQYTR 295
Query: 265 TSRRRFFL 272
TSR++ +L
Sbjct: 296 TSRKKDYL 303
>gi|350294631|gb|EGZ75716.1| putative component of the U3 small nucleolar ribonucleoprotein
[Neurospora tetrasperma FGSC 2509]
Length = 281
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 119/248 (47%), Gaps = 33/248 (13%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S L P+IL+TT R S+R F E+ ++P S RG L+ ++ AK
Sbjct: 59 DEYSE-LSGVIDPRILVTTSRDPSSRLGQFSKEIRLLLPTSVRLNRGNLVLEDLVGAAKA 117
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVL 148
++ T ++++H +R P A+ I P GPT L +VLR DI G + P L+
Sbjct: 118 QNLTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVSESYPRLIF 177
Query: 149 NNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK 203
F+T+LG RV ++++ LFP Q P G RV+TF N D I RHH Y+
Sbjct: 178 EGFSTKLGERVVKILKHLFPPREPTQKPNV-GNRVITFVNNDDTIEVRHHVYV------- 229
Query: 204 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 263
+TS V L E GPRFT+K + GT D K + EW
Sbjct: 230 ---------------RTSYDSV--ELSEVGPRFTMKPFKITMGTLDNKDADTEWHLSQYT 272
Query: 264 DTSRRRFF 271
TSR++ +
Sbjct: 273 RTSRKKNY 280
>gi|119183906|ref|XP_001242930.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392865835|gb|EAS31676.2| U3 small nucleolar ribonucleoprotein IMP4 [Coccidioides immitis RS]
Length = 303
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 120/248 (48%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 80 DIDDEYAVTSGLVDPRPLVTTSRSPSSRLSTFAKEIRLLLPTSIRLNRGTLVLPDLVASA 139
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
T ++++H +R P A+ I LP GPTA F + +VLR DI N G + P L
Sbjct: 140 NAAALTDMVLLHEHRGTPTAITISHLPHGPTASFSIHNVVLRADIPNAARGTVSESYPHL 199
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F T+LG RV ++++ LFP + G RVVTF N D I RHH ++
Sbjct: 200 IFEGFKTKLGMRVVQILKHLFPPREAGKVGSRVVTFKNIDDSIEVRHHVFV--------- 250
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT + V L E GPR T++L ++ GT + GG+ EW
Sbjct: 251 -------------KTGYRDV--ELAEVGPRMTMRLFEIRGGTLEKGAGGDVEWALTQYTR 295
Query: 265 TSRRRFFL 272
TSR++ +L
Sbjct: 296 TSRKKDYL 303
>gi|310800152|gb|EFQ35045.1| brix domain-containing protein [Glomerella graminicola M1.001]
Length = 298
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 119/251 (47%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S+L P++L+TT R S+R AF E+ ++P S RG L +++
Sbjct: 72 DLDDEYSMLSGISEPRVLVTTSRDCSSRLAAFSKEIRLLLPTSVRLNRGNLILPDLVQSC 131
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
K T ++++H +R P AL I LP GPT F L +VLR DI G+ + P L
Sbjct: 132 KSNALTDLVLLHEHRGNPTALTISHLPHGPTVSFSLHNVVLRHDIPGSIRGSVSEAYPHL 191
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ F +RLG R+ ++++ LFP G RVVTF N D I RHH ++
Sbjct: 192 IFEGFKSRLGQRIVKVLKHLFPPRDPITTKAKIGNRVVTFMNNEDSIEVRHHVFV----- 246
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+TS V L E GPR T++ ++ GT + K G+ EW
Sbjct: 247 -----------------RTSYDSV--ELAEVGPRMTMRPFEIRGGTLENKDGDVEWHLTH 287
Query: 262 EMDTSRRRFFL 272
T R++ +L
Sbjct: 288 YTRTGRKKEYL 298
>gi|255937243|ref|XP_002559648.1| Pc13g12320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584268|emb|CAP92301.1| Pc13g12320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 293
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 31/247 (12%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE+ +L G P+ L+TT R S R AF E+ ++P S RGT L ++ A
Sbjct: 73 DEY--VLTSGIIDPRPLVTTSRSPSARLGAFAKEIRLLLPTSIRLNRGTLVLGDLVSSAT 130
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELV 147
T ++++H +R P AL I LP GPTA F L +VLR+DI N G + P LV
Sbjct: 131 SAALTDMVLLHEHRGTPTALTISHLPHGPTASFSLHNVVLRQDIPNAARGTVSESYPHLV 190
Query: 148 LNNFATRLGHRVGRLIQSLF-PQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
F T+LG RV ++++ LF P+ P G R+V+F N+ D I RHH ++
Sbjct: 191 FEGFKTKLGARVVQILKHLFPPREPGKIGNRIVSFVNKDDNIEVRHHVFV---------- 240
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDT 265
KT + V L E GPR T++L ++ GT + G+ EW T
Sbjct: 241 ------------KTGYRDV--ELAEVGPRMTMRLFEIRGGTLEKGSSGDIEWALTQYTRT 286
Query: 266 SRRRFFL 272
S+++ +L
Sbjct: 287 SKKKEYL 293
>gi|356605816|gb|AET24967.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 8 KK-2011]
Length = 182
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 107/204 (52%), Gaps = 25/204 (12%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT R S+R F E+ V PNS RG YD+K++++ + +D T +IV+ R +
Sbjct: 2 VITTSRDPSSRLKMFSKEMRLVFPNSQRINRGHYDVKQLVQACRAQDTTDLIVLTETRGQ 61
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
PD L++ LP GPTA F ++ +V+R DI N G + P L+ N ++LGHR +++
Sbjct: 62 PDGLIVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGHRFTSILKH 121
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ +RV+TF N D+I +RHH Y K +G +
Sbjct: 122 LFP-VPKSDSKRVMTFANTDDYISYRHHIY----KVDEGGEV------------------ 158
Query: 226 ITRLQECGPRFTLKLVSLQHGTFD 249
L E GPRF LK ++ T +
Sbjct: 159 --ELTEVGPRFELKPYQIKLXTLE 180
>gi|363736931|ref|XP_003641776.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Gallus gallus]
Length = 290
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 112/231 (48%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S R F EL VIP + RG ++ ++ + T ++VVH
Sbjct: 83 PKVMVTTSRDPSARLRVFAKELCLVIPGARRLNRGRAEVGALVSACRAAGVTDLLVVHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R +PD L++ LP GPTAHF LS VLR ++ G P ++L+ + LG RVG +
Sbjct: 143 RGQPDGLVLCHLPHGPTAHFTLSGAVLRHEVGGLGGAPLGAPHILLHRLDSALGRRVGTI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P + RRVVTF N+ D I R+H Y +
Sbjct: 203 LKHLFP-VPRPQTRRVVTFANEDDVILVRNHVY-------------------------RR 236
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
Q L+E GPRF L+ ++ GT + + EW P T+R+R L
Sbjct: 237 QGKTVELEEVGPRFQLRPYLIRLGTLEQGDAADVEWRWHPYTTTARKRQLL 287
>gi|212532109|ref|XP_002146211.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Talaromyces marneffei ATCC 18224]
gi|210071575|gb|EEA25664.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Talaromyces marneffei ATCC 18224]
Length = 319
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 21 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 80
DDE D D+ ++ P+ L+TT R S R F E+ ++P S RG
Sbjct: 90 DDEFM---DVDDEYALTSGLVDPRPLVTTSRSPSARLSTFAKEIRLLLPTSIRLNRGNLI 146
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI--KNHGN 138
L ++ A T ++++H +R P A+ I LP GPTA F L ++LR DI + G
Sbjct: 147 LPDLVSSANAAALTDMVLLHEHRGTPTAITISHLPHGPTASFSLHNVMLRADIPDSSRGT 206
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYI 196
+ P L+ F T+LG RV ++++ LFP + G RVVTF N+ D I RHH ++
Sbjct: 207 VSESYPHLIFEGFTTKLGKRVVQILKHLFPPREGGGKLGNRVVTFQNREDAIEVRHHVFV 266
Query: 197 FETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD-TKGGEF 255
+T Q V L E GPR T++L ++ GT + GG+
Sbjct: 267 ----------------------RTGYQDV--ELAEVGPRMTMRLFEIRGGTLEKNAGGDV 302
Query: 256 EWVHKPEMDTSRRRFFL 272
EW TSR++ +L
Sbjct: 303 EWALTQYTRTSRKKDYL 319
>gi|336472155|gb|EGO60315.1| hypothetical protein NEUTE1DRAFT_134364 [Neurospora tetrasperma
FGSC 2508]
Length = 295
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 119/248 (47%), Gaps = 33/248 (13%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S L P+IL+TT R S+R F E+ ++P S RG L+ ++ AK
Sbjct: 73 DEYSE-LSGVIDPRILVTTSRDPSSRLGQFSKEIRLLLPTSVRLNRGNLVLEDLVGAAKA 131
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPELVL 148
++ T ++++H +R P A+ I P GPT L +VLR DI G + P L+
Sbjct: 132 QNLTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVSESYPRLIF 191
Query: 149 NNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK 203
F+T+LG RV ++++ LFP Q P G RV+TF N D I RHH Y+
Sbjct: 192 EGFSTKLGERVVKILKHLFPPREPTQKPNV-GNRVITFVNNDDTIEVRHHVYV------- 243
Query: 204 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 263
+TS V L E GPRFT+K + GT D K + EW
Sbjct: 244 ---------------RTSYDSV--ELSEVGPRFTMKPFKITMGTLDNKDADTEWHLSQYT 286
Query: 264 DTSRRRFF 271
TSR++ +
Sbjct: 287 RTSRKKNY 294
>gi|358395793|gb|EHK45180.1| hypothetical protein TRIATDRAFT_292723 [Trichoderma atroviride IMI
206040]
Length = 297
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 120/251 (47%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L+TT R S R AF E+ ++P S RG L +++ A
Sbjct: 71 DLDDEYAQLSGIVDPRVLVTTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDLVKSA 130
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ + ++++H +R P AL I LP GPT F L +VLR DI G + P L
Sbjct: 131 QSAGLSDMLLLHEHRGTPTALTISHLPHGPTVSFSLHNVVLRHDIPGSIRGTVSEAYPHL 190
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ + F TRLG RV ++++ LFP S G RVVTF N D I RHH ++
Sbjct: 191 IFDGFTTRLGERVVKVLKHLFPPREPITSKNKVGNRVVTFKNIDDSIEVRHHVFV----- 245
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G D+ L E GPR T+++ ++ GT + K G+ EW
Sbjct: 246 RTGYDS-------------------VELSEVGPRMTMRVFEIRGGTLENKEGDVEWHLSQ 286
Query: 262 EMDTSRRRFFL 272
TSR++ +L
Sbjct: 287 YTRTSRKKNYL 297
>gi|189188942|ref|XP_001930810.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187972416|gb|EDU39915.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 295
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 32/259 (12%)
Query: 18 RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 77
R ++EL ++ + S ++ P+IL+TT R S+R F E+ ++P + RG
Sbjct: 65 RTAEEELGLDDEYAQLSGVVD----PRILVTTSRDPSSRLGTFAKEIRLLLPTAIRLNRG 120
Query: 78 TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-- 135
L ++ AK + I+++H +R P AL I P GPTA F L ++LR DI N
Sbjct: 121 NMVLPNLVSSAKSGGLSDIVLLHEHRGTPTALTISHFPHGPTASFSLHNVILRADIPNAS 180
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHH 193
G + P L+ + F T LG R ++++ LFP ++ G RVVTF N D I RHH
Sbjct: 181 RGTVSESYPHLIFDGFTTPLGTRCVQILKHLFPPREATAKVGNRVVTFKNIEDTIEVRHH 240
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGG 253
++ KT Q V L E GPR +++L ++ GT + K G
Sbjct: 241 VFV----------------------KTGFQSV--ELAEVGPRMSMRLFEIRAGTLENKEG 276
Query: 254 EFEWVHKPEMDTSRRRFFL 272
+ EW T R++ +L
Sbjct: 277 DVEWHLNQYTRTGRKKEYL 295
>gi|336263128|ref|XP_003346345.1| hypothetical protein SMAC_07822 [Sordaria macrospora k-hell]
gi|380091673|emb|CCC10805.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 295
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 118/250 (47%), Gaps = 32/250 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S L P+IL+TT R S+R F E+ ++P S RG L+ ++ A
Sbjct: 70 DIDDEYSELSGVIDPRILVTTSRDPSSRLGQFSKEIRLLLPTSVRLNRGNLVLEDLVGAA 129
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 146
K ++ T ++++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 130 KAQNLTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVSESYPRL 189
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ F T+LG RV ++++ LFP Q P G RV+TF N D I RHH Y+
Sbjct: 190 IFEGFNTKLGERVVKILKHLFPPREATQKPNV-GNRVITFVNNDDTIEVRHHVYV----- 243
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
+TS V L E GPRFT+K + GT D K + EW
Sbjct: 244 -----------------RTSYDSV--ELSEVGPRFTMKPFKITMGTLDNKDADTEWHLSQ 284
Query: 262 EMDTSRRRFF 271
TSR++ +
Sbjct: 285 YTRTSRKKNY 294
>gi|406864054|gb|EKD17100.1| U3 small nucleolar ribonucleoprotein IMP4 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 301
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 122/263 (46%), Gaps = 32/263 (12%)
Query: 17 CRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKR 76
RPD A + DE++ L P++L+TT R S R +F E+ +IP + R
Sbjct: 64 SRPDLSASEALDLDDEYAQ-LSGIVDPRVLVTTSRDPSTRLSSFAKEIRLLIPTAIRLNR 122
Query: 77 GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN- 135
G L ++ A+ T I+++H +R P AL + P GPT F L +VLR DI N
Sbjct: 123 GNVILPNLVSSAQAGGLTDIVLLHEHRGVPTALTLSHFPHGPTVSFSLHNVVLRHDIPNS 182
Query: 136 -HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIF 189
G + P L+ F ++LG R+ R+++ +FP G RVVTF N D I
Sbjct: 183 SRGTVSESYPHLIFEGFTSKLGLRIVRVLKHIFPPREAITNKTKVGSRVVTFKNIEDSIE 242
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
RHH ++ +T Q V L E GPR T++ ++ GT +
Sbjct: 243 VRHHVFV----------------------RTGYQSV--ELAEVGPRMTMRCFEIRGGTLE 278
Query: 250 TKGGEFEWVHKPEMDTSRRRFFL 272
K G+ EW TSR++ +L
Sbjct: 279 NKDGDVEWRMNQYTRTSRKKDYL 301
>gi|330913998|ref|XP_003296450.1| hypothetical protein PTT_06561 [Pyrenophora teres f. teres 0-1]
gi|311331375|gb|EFQ95452.1| hypothetical protein PTT_06561 [Pyrenophora teres f. teres 0-1]
Length = 295
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 32/259 (12%)
Query: 18 RPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 77
R ++EL ++ + S ++ P+IL+TT R S+R F E+ ++P + RG
Sbjct: 65 RTAEEELGLDDEYAQLSGVVD----PRILVTTSRDPSSRLGTFAKEIRLLLPTAIRLNRG 120
Query: 78 TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-- 135
L ++ AK + I+++H +R P AL I P GPTA F L ++LR DI N
Sbjct: 121 NMVLPNLVSSAKSGGLSDIVLLHEHRGTPTALTISHFPHGPTASFSLHNVILRADIPNAS 180
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHH 193
G + P L+ + F T LG R ++++ LFP ++ G RVVTF N D I RHH
Sbjct: 181 RGTVSESYPHLIFDGFNTPLGARCVQILKHLFPPREATAKVGNRVVTFKNIEDTIEVRHH 240
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGG 253
++ KT Q V L E GPR +++L ++ GT + K G
Sbjct: 241 VFV----------------------KTGFQSV--ELAEVGPRMSMRLFEIRAGTLENKEG 276
Query: 254 EFEWVHKPEMDTSRRRFFL 272
+ EW T R++ +L
Sbjct: 277 DVEWHLNQYTRTGRKKEYL 295
>gi|358339326|dbj|GAA47412.1| U3 small nucleolar ribonucleoprotein protein IMP4, partial
[Clonorchis sinensis]
Length = 487
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 125/266 (46%), Gaps = 44/266 (16%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
D DD+ L+AG + P++++TT R S+R F EL ++PN+
Sbjct: 258 DGVAAAEDDEYLWAGTED------------PRVVVTTSRSPSSRLKEFAKELRFLVPNAT 305
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG Y K ++E K T +IVV+ R PD L I LP GPTA F L + R +
Sbjct: 306 KINRGNYQNKDLLEACLAKQITDLIVVNETRGVPDTLTISHLPFGPTAVFTLYNVHARHE 365
Query: 133 IKNHGNPTG-----HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDF 187
++ G +G P + + ++LG RV +++ LFP P+ RRV+T++ + D
Sbjct: 366 MEAIGRGSGAKMPQAYPHHIFHGLNSKLGMRVRSILKHLFP-VPKDDSRRVITWYEEDDV 424
Query: 188 IFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 247
I FRHH Y + KE ++QE GP F ++L + G
Sbjct: 425 ILFRHHTYKYVDKE-------------------------LQVQEHGPSFDMRLYKIWRGP 459
Query: 248 F-DTKGGEFEWVHKPEMDTSRRRFFL 272
+ + EWV++P M T+ +R FL
Sbjct: 460 LHEEAAADVEWVYRPYMSTTFKRRFL 485
>gi|256082450|ref|XP_002577469.1| U3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
gi|360044625|emb|CCD82173.1| putative u3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
Length = 301
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 1 MTPRTI-ENTREPDETVCRPDDD-ELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRG 57
M P+ I E + +E + DD E A N DE+ L G P+++ITT R S++
Sbjct: 44 MLPKEIQEGALQLNEELDWSDDGGEGVATNQDDEY---LWAGTEDPRVVITTSRSPSSKL 100
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F EL +IPN+ RG Y K ++E K T +I+V+ +R PD L+I LP G
Sbjct: 101 KEFAKELRFLIPNAAKINRGNYLNKNLLEACLAKQITDVIIVNESRGVPDTLIISHLPFG 160
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGH-----IPELVLNNFATRLGHRVGRLIQSLFPQSPE 172
PTA F L + R D++ G TG P + + LG RV +++ LFP P+
Sbjct: 161 PTAIFTLYNVRTRHDMETMGCGTGAKMPQTYPNHIFKGLNSNLGQRVRCILKHLFP-VPK 219
Query: 173 FRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQEC 232
+RVVT++ + D I FRHH Y K D K E L E
Sbjct: 220 DDSKRVVTWYEEDDVICFRHHTY---------------KYVDKKLE----------LTEH 254
Query: 233 GPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
GP F L+L + G + + EWV++P M+T+ +R FL
Sbjct: 255 GPSFDLRLYKIWRGPLHEEATADIEWVYRPYMNTTFKRQFL 295
>gi|125560184|gb|EAZ05632.1| hypothetical protein OsI_27850 [Oryza sativa Indica Group]
Length = 180
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 27/197 (13%)
Query: 76 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 135
RG + +I+E + D T +++VH +R +PD L++ LP GPTA+F L +V R DIK+
Sbjct: 3 RGGQVISEIVESCRSHDITDLVLVHEHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKD 62
Query: 136 H---GNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
G + P L+L+NF T+ G R +++ LFP P+ +R++TF N+ D+I FRH
Sbjct: 63 RKAMGKMSEAYPHLILDNFTTKTGERTANIVKHLFP-VPKPDSKRIITFANRDDYISFRH 121
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG 252
H Y E G G K+ D L+E GPRF L+L ++ GT D
Sbjct: 122 HVY-----EKHG----GPKSLD--------------LKEVGPRFELRLYQIKRGTVDQAE 158
Query: 253 GEFEWVHKPEMDTSRRR 269
+ E+V +P M+T++++
Sbjct: 159 AQNEFVLRPYMNTAKKQ 175
>gi|356605814|gb|AET24966.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 12 KK-2010]
Length = 184
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 25/204 (12%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT R S+R F E+ V PNS RG YD+K++++ + +D T +IV+ R +
Sbjct: 1 VITTSRDPSSRLKMFSKEMRLVFPNSQRINRGHYDVKQLVQACRAQDTTDLIVLTETRGQ 60
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
PD +++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGLRFTSILKH 120
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ +RV+TF N D++ +RHH Y +D G+
Sbjct: 121 LFP-VPKSDSKRVMTFANTDDYLSYRHHVY--------KTDEAGE--------------- 156
Query: 226 ITRLQECGPRFTLKLVSLQHGTFD 249
L E GPRF LK ++ GT +
Sbjct: 157 -IELTEVGPRFELKPYQIKLGTLE 179
>gi|327293654|ref|XP_003231523.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichophyton rubrum CBS
118892]
gi|326466151|gb|EGD91604.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichophyton rubrum CBS
118892]
Length = 304
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 119/248 (47%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 81 DIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPTSIRLNRGTLVLNDLVASA 140
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ ++++H +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 141 SASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 200
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F T+LG RV +++ LFP + G RVVTF N D I RHH ++
Sbjct: 201 IFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDSIEVRHHVFV--------- 251
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GG+ EW
Sbjct: 252 -------------KTGYQDV--ELAEVGPRMTMRLFEIKGGTLEKGAGGDVEWALTQYTR 296
Query: 265 TSRRRFFL 272
TS+++ +L
Sbjct: 297 TSKKKDYL 304
>gi|302505948|ref|XP_003014931.1| hypothetical protein ARB_06690 [Arthroderma benhamiae CBS 112371]
gi|291178502|gb|EFE34291.1| hypothetical protein ARB_06690 [Arthroderma benhamiae CBS 112371]
Length = 304
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 119/248 (47%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 81 DIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPTSIRLNRGTLVLNDLVASA 140
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ ++++H +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 141 SASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 200
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F T+LG RV +++ LFP + G RVVTF N D I RHH ++
Sbjct: 201 IFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDSIEVRHHVFV--------- 251
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GG+ EW
Sbjct: 252 -------------KTGYQDV--ELAEVGPRMTMRLFEIKGGTLEKGAGGDVEWALTQYTR 296
Query: 265 TSRRRFFL 272
TS+++ +L
Sbjct: 297 TSKKKDYL 304
>gi|449017453|dbj|BAM80855.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 297
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 136/273 (49%), Gaps = 25/273 (9%)
Query: 3 PRTIENTREPDETVCRPD-DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPA-F 60
PRT+E+TR V RP+ D E ++ ++L+ P++L+TT + R
Sbjct: 47 PRTLESTR-----VYRPELDWEQEPPFGEEDIRAVLRGERRPRVLLTTSVQPTGRQIYDL 101
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSI-IVVHTNRREPDALLIIGLPDGPT 119
I +LL + P S Y +R L+++ + + FT + ++V L + LPDGP
Sbjct: 102 IGDLLFLFPGSVYRERDQRTLEELCKAGIDQGFTDLWVIVQGKGLSLRYLQHVRLPDGPV 161
Query: 120 AHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
++LS +V + I + G PT E+V NF T LG + R + +LFP + R+VV
Sbjct: 162 YLYRLSSVVCSESIPHRGTPTPLPVEVVTCNFQTNLGRHIERSLSALFPHEGTPQSRQVV 221
Query: 180 TFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
NQRD+IF R +RYIFE A + + ++V R QE GPRFTLK
Sbjct: 222 LVRNQRDYIFLRFYRYIFE----------------ASRDPEAAERVRVRTQELGPRFTLK 265
Query: 240 LVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L+S+++ D F W ++T +R F L
Sbjct: 266 LLSVRY-PIDRSRVAFSWRRSRVVNTGKRVFAL 297
>gi|315049713|ref|XP_003174231.1| U3 small nucleolar ribonucleoprotein IMP4 [Arthroderma gypseum CBS
118893]
gi|311342198|gb|EFR01401.1| U3 small nucleolar ribonucleoprotein IMP4 [Arthroderma gypseum CBS
118893]
Length = 300
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 119/248 (47%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 77 DIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPTSIRLNRGTLVLNDLVASA 136
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ ++++H +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 137 SASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 196
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F T+LG RV +++ LFP + G RVVTF N D I RHH ++
Sbjct: 197 IFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDSIEVRHHVFV--------- 247
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GG+ EW
Sbjct: 248 -------------KTGYQDV--ELAEVGPRMTMRLFEIKGGTLEKGAGGDVEWALTQYTR 292
Query: 265 TSRRRFFL 272
TS+++ +L
Sbjct: 293 TSKKKDYL 300
>gi|326469175|gb|EGD93184.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichophyton tonsurans
CBS 112818]
gi|326479320|gb|EGE03330.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichophyton equinum CBS
127.97]
Length = 300
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 119/248 (47%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 77 DIDDEYAVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPTSIRLNRGTLVLNDLVASA 136
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ ++++H +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 137 SASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 196
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F T+LG RV +++ LFP + G RVVTF N D I RHH ++
Sbjct: 197 IFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDSIEVRHHVFV--------- 247
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GG+ EW
Sbjct: 248 -------------KTGYQDV--ELAEVGPRMTMRLFEIKGGTLEKGAGGDVEWALTQYTR 292
Query: 265 TSRRRFFL 272
TS+++ +L
Sbjct: 293 TSKKKDYL 300
>gi|258570657|ref|XP_002544132.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Uncinocarpus
reesii 1704]
gi|237904402|gb|EEP78803.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Uncinocarpus
reesii 1704]
Length = 342
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 120/248 (48%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 119 DIDDEYAVTSGLVDPRPLVTTSRSPSSRLSTFAKEIRLLLPTSIRLNRGTLVLPDLVASA 178
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
T +I++H +R P A+ I LP GPTA F + +VLR DI N G + P L
Sbjct: 179 SAAALTDMILLHEHRGTPTAITISHLPHGPTASFSIHNVVLRADIPNAARGTVSESYPHL 238
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F ++LG RV ++++ LFP + G RVVTF N D I RHH ++
Sbjct: 239 IFEGFKSKLGMRVVQILKHLFPPRDAGKIGNRVVTFKNIEDSIEVRHHVFV--------- 289
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT + V L E GPR T++L ++ GT + GG+ EW
Sbjct: 290 -------------KTGYRDV--ELAEVGPRMTMRLFQIRGGTLEKGAGGDVEWALTQYTR 334
Query: 265 TSRRRFFL 272
TSR++ +L
Sbjct: 335 TSRKKDYL 342
>gi|123503453|ref|XP_001328518.1| Brix domain containing protein [Trichomonas vaginalis G3]
gi|121911462|gb|EAY16295.1| Brix domain containing protein [Trichomonas vaginalis G3]
Length = 295
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 29/240 (12%)
Query: 20 DDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT 78
DD+E N+ D +++ G P + +TT R + F E+ +IPN+ RG
Sbjct: 61 DDNETQFQNELDNEYAMM--GVEDPLVAVTTSRDPAGPIKTFAREISQIIPNAQRINRGQ 118
Query: 79 YDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 138
DLK + + ++ D T +++VH +PD ++I LP GPTA+ L +V+R+D+ +
Sbjct: 119 MDLKGLADLCRQHDMTDLVIVHGTHGDPDCIVISHLPYGPTAYLSLKNVVMRRDVPDAPP 178
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFE 198
+ P LV + ++LG R+ ++++LFP P+ R+++F N+ D+I FR H +
Sbjct: 179 LSAAFPHLVFEDMTSKLGKRITDILKALFP-VPKPESHRIISFVNRNDWISFRQHTFT-- 235
Query: 199 TKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWV 258
++KG +LQE GPR +KL + G+ D E E+
Sbjct: 236 --KTKGQ---------------------IQLQEVGPRMEMKLFKIVRGSIDNAAPEVEFA 272
>gi|440632948|gb|ELR02867.1| hypothetical protein GMDG_05799 [Geomyces destructans 20631-21]
Length = 381
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L+TT R S+R +F E+ ++P S RG L +I+ A
Sbjct: 155 DLDDEYAQLSGIVDPRVLVTTSRDPSSRLSSFAKEIRLLLPTSIRLNRGNLVLGNLIQSA 214
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ + +I++H +R P A+ + P GPT F L +VLR DI N G + P L
Sbjct: 215 QASGLSDMILLHEHRGTPTAMTLSHFPHGPTISFSLHNVVLRHDIPNSSRGTVSESYPHL 274
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ F +RLG R+ ++++ +FP G RVVTF N D I RHH ++
Sbjct: 275 IFEGFTSRLGQRIVKILKHIFPPREAVTNRTKLGSRVVTFKNIEDTIEVRHHVFV----- 329
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
KT Q V L E GPR +++ ++ GT + K G+ EW
Sbjct: 330 -----------------KTGYQSV--ELAEVGPRMSMRCFEIRGGTLENKDGDVEWRMNQ 370
Query: 262 EMDTSRRRFFL 272
TS+++ +L
Sbjct: 371 YTRTSKKKDYL 381
>gi|356605804|gb|AET24961.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 17 KK-2011]
Length = 171
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 25/194 (12%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT R S+R F E+ + PN+ RG YD+K++++ K +D T +I++ R
Sbjct: 1 VITTSRDPSSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGN 60
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
PD +++ LP GPTA F ++ V+R DI N G + P L+ +N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAFFSMANTVMRHDIPNCGTMSEQYPHLIFDNLNSKLGVRFQTILKH 120
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ +RV+TF N DFI FRHH +F+T++S
Sbjct: 121 LFP-VPKSDSKRVITFSNSDDFISFRHH--VFKTEDSGE--------------------- 156
Query: 226 ITRLQECGPRFTLK 239
L E GPRF LK
Sbjct: 157 -IELTEVGPRFELK 169
>gi|302660354|ref|XP_003021857.1| hypothetical protein TRV_04034 [Trichophyton verrucosum HKI 0517]
gi|291185775|gb|EFE41239.1| hypothetical protein TRV_04034 [Trichophyton verrucosum HKI 0517]
Length = 304
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 118/248 (47%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + P+ L+TT R S+R F E+ ++P S RGT L ++ A
Sbjct: 81 DIDDEYGVTSGLVDPRPLVTTSRDPSSRLSTFAKEIRLLMPTSIRLNRGTLVLNDLVASA 140
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ ++++H +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 141 SASALSDMVILHEHRGTPTAITISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 200
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
+ F T+LG RV +++ LFP + G RVVTF N D I RHH ++
Sbjct: 201 IFEGFTTKLGKRVVQILSHLFPPREAGKVGSRVVTFKNIEDSIEVRHHVFV--------- 251
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KT Q V L E GPR T++L ++ GT + GG+ EW
Sbjct: 252 -------------KTGYQDV--ELAEVGPRMTMRLFEIKGGTLEKGAGGDVEWALTQYTR 296
Query: 265 TSRRRFFL 272
TS+++ +L
Sbjct: 297 TSKKKDYL 304
>gi|350629791|gb|EHA18164.1| hypothetical protein ASPNIDRAFT_38235 [Aspergillus niger ATCC 1015]
Length = 326
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
DE++ PD+ D D+ ++ P+ ++TT R S R F E+ ++P S
Sbjct: 88 DESIT-PDNQNKDGDVDLDDEYALTSGIADPRPIVTTSRSPSVRLGTFAKEIRLLLPTSI 146
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG L ++ A T +I+VH +R P A+ I LP GPTA F L +VLR D
Sbjct: 147 RLNRGNLVLPDLVSSANAAALTDMILVHEHRGTPTAMTISHLPHGPTASFSLHNVVLRAD 206
Query: 133 IKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIF 189
I N G + P L+ F T+LG RV ++++ LFP + G RVV+F N+ D I
Sbjct: 207 IPNAARGTVSESYPHLIFEGFKTKLGLRVVQILKHLFPPRETGKVGNRVVSFVNKEDSIE 266
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
RHH ++ KT + V L E GPR T++L ++ GT +
Sbjct: 267 VRHHVFV----------------------KTGYRDV--ELAEVGPRMTMRLFEIRGGTLE 302
Query: 250 T-KGGEFEWVHKPEMDTSRRRFFL 272
G+ EW TS+++ +L
Sbjct: 303 KGSSGDVEWALTQYTRTSKKKDYL 326
>gi|358388727|gb|EHK26320.1| hypothetical protein TRIVIDRAFT_73680 [Trichoderma virens Gv29-8]
Length = 297
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L+TT R S R AF E+ ++P S RG L +++ A
Sbjct: 71 DLDDEYAQLSGIVDPRVLVTTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDLVKSA 130
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ + ++++H +R P AL I P GPT F L +VLR DI G + P L
Sbjct: 131 QSAGLSDMLLLHEHRGTPTALTISHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPHL 190
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ + F TRLG RV ++++ LFP S G RVVTF N D I RHH ++
Sbjct: 191 IFDGFTTRLGERVVKVLKHLFPPREPITSKTKIGNRVVTFKNIDDSIEVRHHVFV----- 245
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G D+ L E GPR T+++ ++ GT + K G+ EW
Sbjct: 246 RTGYDS-------------------VELAEVGPRMTMRIFEIRGGTLENKDGDVEWHLSQ 286
Query: 262 EMDTSRRRFFL 272
TS+++ +L
Sbjct: 287 YTRTSKKKNYL 297
>gi|340517425|gb|EGR47669.1| hypothetical protein TRIREDRAFT_22611 [Trichoderma reesei QM6a]
Length = 297
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L+TT R S R AF E+ ++P S RG L +++ A
Sbjct: 71 DLDDEYAQLSGIVDPRVLVTTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDLVKSA 130
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ + ++++H +R P AL I P GPT F L +VLR DI G + P L
Sbjct: 131 QSAGLSDMLLLHEHRGTPTALTISHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPHL 190
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ + F TRLG RV ++++ LFP S G RVVTF N D I RHH ++
Sbjct: 191 IFDGFTTRLGERVVKVLKHLFPPREPITSKSKIGNRVVTFKNIDDSIEVRHHVFV----- 245
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G D+ L E GPR T+++ ++ GT + K G+ EW
Sbjct: 246 RTGYDS-------------------VELAEVGPRMTMRVFEIRGGTLENKDGDVEWHLSQ 286
Query: 262 EMDTSRRRFFL 272
TS+++ +L
Sbjct: 287 YTRTSKKKNYL 297
>gi|356605810|gb|AET24964.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 6 KK-2011]
Length = 180
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 45 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 104
++ITT S+R F E+ +IPNS RG YD+K++++ + +D T +IV+ R
Sbjct: 1 VVITTSHDPSSRLKVFSKEMRLMIPNSQRINRGHYDVKQLVQACRAQDTTDLIVLTETRG 60
Query: 105 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 164
PD +++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +++
Sbjct: 61 NPDGMIVCHLPFGPTAFFTMNNVVMRHDIPNSGTMSEQYPHLIFNKLDSKLGIRFMTILK 120
Query: 165 SLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQK 224
LFP P+ +RV+TF N D+I +RHH Y +D G+
Sbjct: 121 HLFP-VPKPDSKRVMTFANTNDYISYRHHVY--------KTDDGGE-------------- 157
Query: 225 VITRLQECGPRFTLKLVSLQHGTFD 249
L E GPRF LK ++ GT +
Sbjct: 158 --IELSEVGPRFELKPYQIKLGTLE 180
>gi|145240147|ref|XP_001392720.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
niger CBS 513.88]
gi|134077234|emb|CAK45575.1| unnamed protein product [Aspergillus niger]
Length = 297
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
DE++ PD+ D D+ ++ P+ ++TT R S R F E+ ++P S
Sbjct: 59 DESIT-PDNQNKDGDVDLDDEYALTSGIADPRPIVTTSRSPSVRLGTFAKEIRLLLPTSI 117
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG L ++ A T +I+VH +R P A+ I LP GPTA F L +VLR D
Sbjct: 118 RLNRGNLVLPDLVSSANAAALTDMILVHEHRGTPTAMTISHLPHGPTASFSLHNVVLRAD 177
Query: 133 IKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIF 189
I N G + P L+ F T+LG RV ++++ LFP + G RVV+F N+ D I
Sbjct: 178 IPNAARGTVSESYPHLIFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVSFVNKEDSIE 237
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
RHH ++ KT + V L E GPR T++L ++ GT +
Sbjct: 238 VRHHVFV----------------------KTGYRDV--ELAEVGPRMTMRLFEIRGGTLE 273
Query: 250 T-KGGEFEWVHKPEMDTSRRRFFL 272
G+ EW TS+++ +L
Sbjct: 274 KGSSGDVEWALTQYTRTSKKKDYL 297
>gi|226469318|emb|CAX70138.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Schistosoma
japonicum]
Length = 298
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 126/264 (47%), Gaps = 44/264 (16%)
Query: 15 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 74
V DD+ L+AG + P++++TT R S++ F EL +IPN+
Sbjct: 67 VVTSQDDEYLWAGTED------------PRVVVTTSRSPSSKLKEFAKELRFLIPNATKI 114
Query: 75 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 134
RG Y K ++E K T +++V+ +R PD L+I LP GPTA F L + R D++
Sbjct: 115 NRGNYLNKNLLEACLAKQITDVVIVNESRGVPDTLIISHLPFGPTAIFTLYNVRTRHDME 174
Query: 135 NHGNPTG-----HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 189
G +G P + ++LG RV +++ LFP P+ +RVVT++ + D I
Sbjct: 175 TMGRGSGLKMPQTFPNHIFKGLNSKLGQRVRCILKHLFP-VPKDDSKRVVTWYEEDDVIC 233
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
FRHH Y K D K E L E GP F L+L + G
Sbjct: 234 FRHHTY---------------KYVDKKLE----------LTEHGPSFDLRLYKILRGPLH 268
Query: 250 TKG-GEFEWVHKPEMDTSRRRFFL 272
+ + EWV++P M+T+ +R FL
Sbjct: 269 EEATADVEWVYRPYMNTTFKRRFL 292
>gi|356605824|gb|AET24971.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 9 KK-2011]
Length = 176
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 49 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 108
T R S+R F E+ + PN+ RG YD+K++++ K +D T +I++ R PD
Sbjct: 1 TSRDPSSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGNPDG 60
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 168
+++ LP GPTA F ++ +V+R DI N G + P L+ +N ++LG R +++ LFP
Sbjct: 61 MIVCHLPFGPTAFFTMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGQRFTTILKHLFP 120
Query: 169 QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR 228
P+ +R++TF N DF+ FRHH Y ET D + E
Sbjct: 121 -VPKPDSKRIMTFSNVDDFVSFRHHTYKTET--------------DGEIE---------- 155
Query: 229 LQECGPRFTLKLVSLQHGTF 248
L E GPRF LK ++ GT
Sbjct: 156 LNEVGPRFELKPYQIKLGTL 175
>gi|159115488|ref|XP_001707967.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia ATCC 50803]
gi|157436075|gb|EDO80293.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia ATCC 50803]
Length = 283
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 30/231 (12%)
Query: 27 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 86
G D DE+++ PK+L+TT R S+R F EL + PN+ RG + + ++++
Sbjct: 68 GLDDDEYAN----AKVPKLLLTTSRNPSSRLRNFAKELRYLFPNTQRVNRGRHVISELVD 123
Query: 87 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 146
A+ FT ++++H R PD L++ LP GPTA+F LS +VLR + + H P L
Sbjct: 124 VARSSGFTDLLILHETRGNPDGLVLSHLPYGPTAYFTLSNVVLRSETNSDETVPEHAPHL 183
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+ ++LG R+ ++++ LFP + +RV +F N++D I FR+H Y
Sbjct: 184 IFEGMHSKLGARLTQILKHLFPTGGK-SAKRVCSFINRQDSIVFRNHVY----------- 231
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
K + V L+E GPRF L ++ T ++ GE EW
Sbjct: 232 -----------RKVGPEVV---LKEIGPRFCLHPYMIRLDTMESTAGETEW 268
>gi|367025917|ref|XP_003662243.1| hypothetical protein MYCTH_2302653 [Myceliophthora thermophila ATCC
42464]
gi|347009511|gb|AEO56998.1| hypothetical protein MYCTH_2302653 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 35/242 (14%)
Query: 26 AGNDA----DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 81
AG+D+ DE+S L P++L+TT R S+R +F E+ + P RG L
Sbjct: 65 AGDDSLDIDDEYSE-LSGVVDPRVLVTTSRDPSSRLMSFSKEVRLLFPTGIRLNRGNLVL 123
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNP 139
++ A+ + + ++++H +R P A+ I P GPT L +VLR DI G
Sbjct: 124 PDLVRSAQSERLSDVVLLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPRSIKGTV 183
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLF----PQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
+ P L+ NF T LGHR+ ++++ LF P + + G RV+TF NQ D I RHH Y
Sbjct: 184 SESYPHLIFENFTTPLGHRIVKILKHLFPPRDPTAGKNAGNRVITFVNQDDCIEVRHHVY 243
Query: 196 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 255
+ KTS V L E GPRFT++ S+ GT + K +
Sbjct: 244 V----------------------KTSYDSV--ELSEVGPRFTMRPFSITMGTLENKDADV 279
Query: 256 EW 257
EW
Sbjct: 280 EW 281
>gi|226486900|emb|CAX74527.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Schistosoma
japonicum]
Length = 298
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 126/264 (47%), Gaps = 44/264 (16%)
Query: 15 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 74
V DD+ L+AG + P++++TT R S++ F EL +IPN+
Sbjct: 67 VVTSQDDEYLWAGTED------------PRVVVTTSRSPSSKLKEFAKELRFLIPNATKI 114
Query: 75 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 134
RG Y K ++E K T +++V+ +R PD L+I LP GPTA F L + R D++
Sbjct: 115 NRGNYLNKNLLEACLAKQITDVVIVNESRGVPDTLIISHLPFGPTAIFTLYNVRTRHDME 174
Query: 135 NHGNPTG-----HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIF 189
G +G P + ++LG RV +++ LFP P+ +RVVT++ + D I
Sbjct: 175 TMGRGSGLKMPQTFPNHIFKGLNSKLGQRVRCILKHLFP-VPKDDSKRVVTWYEEDDVIC 233
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
FRHH Y K D K E L E GP F L+L + G
Sbjct: 234 FRHHTY---------------KYVDKKLE----------LTEHGPSFDLRLYKILRGPLH 268
Query: 250 TKG-GEFEWVHKPEMDTSRRRFFL 272
+ + EWV++P M+T+ +R FL
Sbjct: 269 EEATADVEWVYRPYMNTTFKRRFL 292
>gi|68303297|gb|AAY89588.1| U3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
Length = 303
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 133/278 (47%), Gaps = 38/278 (13%)
Query: 1 MTPRTI-ENTREPDETVCRPDDD-ELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRG 57
M P+ I E + +E + DD E A N DE+ L G P+++ITT R S++
Sbjct: 40 MLPKEIQEGALQLNEELDWSDDGGEGVATNQDDEY---LWAGTEDPRVVITTSRSPSSKL 96
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F EL +IPN+ RG Y K ++E K T +I+V+ +R PD L+I LP G
Sbjct: 97 KEFAKELRFLIPNAAKINRGNYLNKNLLEACLAKQITDVIIVNESRGVPDTLIISHLPFG 156
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGH-----IPELVLNNFATRLGHRVGRLIQSLFPQSPE 172
PTA F L + R D++ G TG P + + LG RV +++ LFP P+
Sbjct: 157 PTAIFTLYNVRTRHDMETMGCGTGAKMPQTYPNHIFKGLNSNLGQRVRCILKHLFP-VPK 215
Query: 173 FRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQEC 232
+RVVT++ + D I FRHH Y K D K E L E
Sbjct: 216 NDSKRVVTWYEEDDVICFRHHTY---------------KYVDKKLE----------LTEH 250
Query: 233 GPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRR 269
GP F L+L + G + + EWV++P M+T+ +R
Sbjct: 251 GPSFDLRLYKIWRGPLHEEATADIEWVYRPYMNTTFKR 288
>gi|308163084|gb|EFO65446.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia lamblia P15]
Length = 283
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 30/231 (12%)
Query: 27 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 86
G D DE+++ PK+L+TT R S+R F EL + PN+ RG + + ++++
Sbjct: 68 GLDDDEYAN----AKVPKLLLTTSRNPSSRLRNFAKELRYLFPNTQRVNRGRHVISELVD 123
Query: 87 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 146
A+ FT ++++H R PD L++ LP GPTA+F LS +VLR + + H P L
Sbjct: 124 VARSSGFTDLLILHETRGNPDGLVLSHLPYGPTAYFTLSNVVLRSETNSDETVPEHAPHL 183
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+ ++LG R+ ++++ LFP + +RV +F N++D I FR+H Y
Sbjct: 184 IFEGMHSKLGTRLTQILKHLFPTGGK-SAKRVCSFINRQDSIVFRNHVY----------- 231
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
K + V L+E GPRF L ++ T ++ GE EW
Sbjct: 232 -----------RKVGPEVV---LKEIGPRFCLHPYMIRLDTMESTAGETEW 268
>gi|358371938|dbj|GAA88544.1| U3 small nucleolar ribonucleoprotein protein Imp4 [Aspergillus
kawachii IFO 4308]
Length = 297
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
DE++ PD+ D D+ ++ P+ ++TT R S R F E+ ++P S
Sbjct: 59 DESIT-PDNQNKDGDVDLDDEYALTSGIADPRPIVTTSRSPSVRLGTFAKEIRLLLPTSI 117
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG L ++ A T +I+VH +R P A+ I LP GPTA F L +VLR D
Sbjct: 118 RLNRGNLVLPDLVSSATAAALTDMILVHEHRGTPTAMTISHLPHGPTASFSLHNVVLRAD 177
Query: 133 IKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIF 189
I N G + P L+ F T+LG RV ++++ LFP + G RVV+F N+ D I
Sbjct: 178 IPNAARGTVSESYPHLIFEGFKTKLGLRVVQILKHLFPPRETGKVGNRVVSFVNKEDNIE 237
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
RHH ++ KT + V L E GPR T++L ++ GT +
Sbjct: 238 VRHHVFV----------------------KTGYRDV--ELAEVGPRMTMRLFEIRGGTLE 273
Query: 250 T-KGGEFEWVHKPEMDTSRRRFFL 272
G+ EW TS+++ +L
Sbjct: 274 KGSSGDVEWALTQYTRTSKKKDYL 297
>gi|171693711|ref|XP_001911780.1| hypothetical protein [Podospora anserina S mat+]
gi|170946804|emb|CAP73608.1| unnamed protein product [Podospora anserina S mat+]
Length = 296
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 124/258 (48%), Gaps = 34/258 (13%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
+DD L ++ E S ++ P+IL+TT R S+R +F E+ + P RG
Sbjct: 66 EDDSLDIDDEYSELSGVVD----PRILVTTSRDPSSRLMSFSKEIRLLFPTGIRLNRGNL 121
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--G 137
L +++ A+ + + +I++H +R P A+ I P GPT L +VLR DI G
Sbjct: 122 VLPELVRSAQAEKLSDVILLHEHRGTPTAMTISHFPHGPTLMASLHNVVLRADIPRSIKG 181
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFP----QSPEFRGRRVVTFHNQRDFIFFRHH 193
+ P L+ + F T+LG R+ ++++ LFP + + G RV+TF NQ D I RHH
Sbjct: 182 TVSESYPHLIFDGFTTKLGLRIVKILKHLFPPRDVTASKAAGNRVITFVNQDDCIEVRHH 241
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGG 253
Y+ +TS V L E GPRFT++ S+ GT + K
Sbjct: 242 VYV----------------------RTSYDSV--ELSEVGPRFTMRPFSITMGTLENKDA 277
Query: 254 EFEWVHKPEMDTSRRRFF 271
+ EW TSR++ +
Sbjct: 278 DSEWHLSQYTRTSRKKNY 295
>gi|116197823|ref|XP_001224723.1| hypothetical protein CHGG_07067 [Chaetomium globosum CBS 148.51]
gi|88178346|gb|EAQ85814.1| hypothetical protein CHGG_07067 [Chaetomium globosum CBS 148.51]
Length = 296
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 35/256 (13%)
Query: 26 AGNDA----DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 81
AG+D+ DE+S L P++L+TT R S+R +F E+ + P RG L
Sbjct: 65 AGDDSLDIDDEYSE-LSGVVDPRVLVTTSRDPSSRLMSFSKEIRLLFPTGIRLNRGNLVL 123
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNP 139
+++ A+ + + +I++H +R P A+ I P GPT L +VLR DI G
Sbjct: 124 PELVRSAQSERLSDVILLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPRSIKGTV 183
Query: 140 TGHIPELVLNNFATRLGHRVGRLIQSLFP----QSPEFRGRRVVTFHNQRDFIFFRHHRY 195
+ P L+ NF T LG R+ ++++ LFP + + G RV+TF NQ D I RHH Y
Sbjct: 184 SESYPHLIFENFQTPLGRRIVKVLKHLFPPRDATASKTAGNRVITFMNQDDCIEVRHHVY 243
Query: 196 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF 255
+ +TS V L E GPRFT++ S+ GT + K +
Sbjct: 244 V----------------------RTSYDSV--ELSEVGPRFTMRPFSITMGTLENKDADV 279
Query: 256 EWVHKPEMDTSRRRFF 271
EW TSR++ +
Sbjct: 280 EWHLSQYTRTSRKKNY 295
>gi|356605806|gb|AET24962.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 15 KK-2011]
Length = 179
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 25/196 (12%)
Query: 54 SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 113
S+R F E+ + PN+ RG YD+K++++ K +D T +I++ R PD +++
Sbjct: 3 SSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGNPDGMIVCH 62
Query: 114 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 173
LP GPTA F ++ +V+R DI N G + P L+ +N ++LG R +++ LFP P+
Sbjct: 63 LPFGPTAFFSMANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGLRFTTILKHLFP-VPKP 121
Query: 174 RGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 233
+R++TF N DF+ FRHH Y ++A+G+ L E G
Sbjct: 122 DSKRIITFANSDDFLSFRHHVY--------HTEADGE----------------VELTEVG 157
Query: 234 PRFTLKLVSLQHGTFD 249
PRF LK ++ GT +
Sbjct: 158 PRFELKPYQIKLGTLE 173
>gi|356605800|gb|AET24959.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 19 KK-2011]
Length = 175
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 25/195 (12%)
Query: 54 SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 113
S+R F E+ + PN+ RG YD+K++++ K +D T +I++ R PD +++
Sbjct: 6 SSRLKMFSKEMKLIFPNAQRINRGHYDVKQVVQACKAQDSTDLIILTETRGNPDGMIVCH 65
Query: 114 LPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEF 173
LP GPTA F ++ V+R DI N G + P L+ +N ++LG R +++ LFP P+
Sbjct: 66 LPFGPTAFFSMANTVMRHDIPNCGTMSEQYPHLIFDNLNSKLGVRFQTILKHLFP-VPKS 124
Query: 174 RGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECG 233
+RV+TF N DFI FRHH +F+T++ NG+ L E G
Sbjct: 125 DSKRVITFSNSDDFISFRHH--VFKTED------NGE----------------IELTEVG 160
Query: 234 PRFTLKLVSLQHGTF 248
PRF LK ++ GT
Sbjct: 161 PRFELKPYQIKLGTL 175
>gi|169763352|ref|XP_001727576.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
oryzae RIB40]
gi|238489243|ref|XP_002375859.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus flavus NRRL3357]
gi|83770604|dbj|BAE60737.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698247|gb|EED54587.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus flavus NRRL3357]
gi|391869661|gb|EIT78856.1| U3 small nucleolar ribonucleoprotein (snoRNP) component
[Aspergillus oryzae 3.042]
Length = 299
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 120/248 (48%), Gaps = 28/248 (11%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ ++ P+ ++TT R S R AF E+ ++P S RG L ++ A
Sbjct: 76 DLDDEYALTSGVVDPRPIVTTSRNPSVRLGAFAKEIRLLLPTSIRLNRGGLVLPDLVSSA 135
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
T ++++H +R P A+ I LP GPTA F L +VLR DI N G + P L
Sbjct: 136 NAAALTDMVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHL 195
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGS 205
V F T+LG RV ++++ LFP + G RVV+F N+ D I RHH ++
Sbjct: 196 VFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVSFVNREDSIEVRHHVFV--------- 246
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMD 264
KTS + V L E GPR T++L ++ G+ + G+ EW
Sbjct: 247 -------------KTSYRDV--ELAEVGPRMTMRLFEIRGGSLEKGSSGDVEWALTQYTR 291
Query: 265 TSRRRFFL 272
TSR++ +L
Sbjct: 292 TSRKKDYL 299
>gi|342879016|gb|EGU80293.1| hypothetical protein FOXB_09220 [Fusarium oxysporum Fo5176]
Length = 298
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L+TT R S R AF E+ ++P + RG L ++ A
Sbjct: 72 DLDDEYAQLSGIVDPRVLVTTSRDPSARLSAFAKEIRLLLPTAVRLNRGNLILPDLVRSA 131
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ + ++++H +R P AL + P GPT F L +VLR DI G + P L
Sbjct: 132 QSAGLSDVVLLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPHL 191
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ + F +RLG RV ++++ +FP S G RVVTF N D I RHH ++
Sbjct: 192 IFDGFTSRLGERVVKVLKHVFPPREAITSKNKVGNRVVTFKNIEDSIEVRHHVFV----- 246
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G D+ L E GPR T+++ ++ GT D K G+ EW
Sbjct: 247 RTGYDS-------------------VELAEVGPRMTMRVFEIRSGTLDNKDGDVEWHLTQ 287
Query: 262 EMDTSRRRFFL 272
T++++ +L
Sbjct: 288 YTRTAKKKNYL 298
>gi|426220648|ref|XP_004004526.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Ovis
aries]
Length = 294
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 29/234 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI--PELVLN-NFATRLGHRV 159
R P L++ LP GPTA+F L +V+R D+ + G+ + P L+ A G V
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDVPDLGSVSNKFRAPNLIFRGLGAGGWGLGV 202
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+++ LFP P+ RRV+TF NQ D+I FRHH Y +K
Sbjct: 203 SDILRYLFP-VPKDDSRRVITFANQDDYISFRHHVY----------------------KK 239
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
T+ + V L E GPRF LKL ++ GT + + + EW P +T+ +R FL
Sbjct: 240 TNHRNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 291
>gi|121701375|ref|XP_001268952.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus clavatus NRRL 1]
gi|119397095|gb|EAW07526.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus clavatus NRRL 1]
Length = 299
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 35/268 (13%)
Query: 13 DETVCRPDD---DELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVI 68
DE++ PD D +A D DE++ L G P+ ++TT R S R F E+ ++
Sbjct: 59 DESLQTPDKQSKDTDYADLD-DEYA--LTSGIIDPRPIVTTSRSPSVRLGTFAKEIRLLL 115
Query: 69 PNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 128
P S RG L +++ A T +I++H +R P A+ I LP GPTA F L +V
Sbjct: 116 PTSIRLNRGNLVLPELVSSANAAALTDMILLHEHRGTPTAMTISHLPHGPTASFSLHNVV 175
Query: 129 LRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQR 185
LR DI N G + P L+ F T+LG RV ++++ LFP + + G RVV+F N+
Sbjct: 176 LRADIPNAARGTVSESYPHLIFEGFKTKLGLRVVQILKHLFPPREDGKVGNRVVSFVNKE 235
Query: 186 DFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 245
D I RHH ++ KT + V L E GPR T++L ++
Sbjct: 236 DSIEVRHHVFV----------------------KTGYRDV--ELAEVGPRMTMRLFEIRG 271
Query: 246 GTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
G+ + G+ EW TS+++ +L
Sbjct: 272 GSLEKGSSGDVEWALTQYTRTSKKKDYL 299
>gi|12845999|dbj|BAB26989.1| unnamed protein product [Mus musculus]
Length = 251
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 90/153 (58%), Gaps = 1/153 (0%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 143 RGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
++ LFP P+ RV+TF NQ D+I FRHH Y
Sbjct: 203 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY 234
>gi|326927012|ref|XP_003209689.1| PREDICTED: u3 small nucleolar ribonucleoprotein protein IMP4-like
[Meleagris gallopavo]
Length = 292
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 111/231 (48%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F EL VIP + RG ++ ++ + T ++V+H
Sbjct: 85 PKVMVTTSRDPSSRLRVFAKELCLVIPGARRLNRGRAEVGVLVSACRAAGVTDLLVLHET 144
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTAHF LS VLR ++ G P ++L+ + LG R+G +
Sbjct: 145 RGRPDGLVLCHLPHGPTAHFTLSGAVLRHEVGGLGGAPLGAPHILLHRLDSALGRRLGTI 204
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P + RRVVTF N+ D I R+H Y +
Sbjct: 205 LKHLFP-VPRPQTRRVVTFANEDDVILVRNHVY-------------------------RR 238
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
Q L+E GPRF L+ ++ GT + + EW P T+ +R L
Sbjct: 239 QGKTVELEEVGPRFQLRPYLIRLGTLEQGDAADVEWRWHPYTATAPKRHLL 289
>gi|253746805|gb|EET01834.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Giardia intestinalis ATCC 50581]
Length = 283
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 30/231 (12%)
Query: 27 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 86
G D DE+++ PK+L+TT R S+R F EL + PN+ RG + + ++++
Sbjct: 68 GLDDDEYAN----AKIPKLLLTTSRNPSSRLRNFAKELRYLFPNTQRVNRGRHVISELVD 123
Query: 87 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPEL 146
A+ FT ++++H R PD L++ LP GPTA+F LS +VLR + + H P L
Sbjct: 124 VARSNGFTDLLIIHETRGNPDGLVLSHLPYGPTAYFTLSNVVLRSETNSDETVPEHAPHL 183
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
+ ++LG R+ ++++ LFP + +RV +F N++D I FR+H Y
Sbjct: 184 IFEGMHSKLGARLTQILKHLFPTGNK-SAKRVCSFINRQDSIVFRNHIY----------- 231
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
K + V L+E GPRF L ++ T ++ E EW
Sbjct: 232 -----------RKVGPEVV---LKEIGPRFCLHPYMIRLDTVESTASETEW 268
>gi|429862442|gb|ELA37092.1| u3 small nucleolar ribonucleoprotein imp4, partial [Colletotrichum
gloeosporioides Nara gc5]
Length = 296
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 38/266 (14%)
Query: 17 CRPD---DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
RPD ++EL D D+ S L P+IL+TT R S+R AF E+ ++P S
Sbjct: 59 SRPDLTVNEEL----DLDDEYSQLSGIQDPRILVTTSRDPSSRLAAFSKEIRLLLPTSVR 114
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG L +++ K + ++++H +R P A+ I LP GPT L +VLR DI
Sbjct: 115 LNRGNLILDDLVQSCKSNSLSDVVLLHEHRGVPTAITISHLPHGPTLSCSLHSVVLRHDI 174
Query: 134 KN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRD 186
G+ + P L+ F +RLG R+ ++++ LFP G RVVTF N D
Sbjct: 175 PGSIRGSVSEAYPHLIFEGFKSRLGQRIVKILKHLFPPREPITNKTKIGNRVVTFVNNED 234
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
I RHH ++ +TS V L E GPR T++ ++ G
Sbjct: 235 TIEVRHHVFV----------------------RTSYDSV--ELAEVGPRMTMRPFEIRAG 270
Query: 247 TFDTKGGEFEWVHKPEMDTSRRRFFL 272
T + K G+ EW T R++ +L
Sbjct: 271 TLENKEGDVEWHLSQYTRTGRKKEYL 296
>gi|67516731|ref|XP_658251.1| hypothetical protein AN0647.2 [Aspergillus nidulans FGSC A4]
gi|40745996|gb|EAA65152.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 282
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 28/234 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+ ++TT R S R F E+ ++P S RG L ++ A T ++++H +
Sbjct: 73 PRPIVTTSRSPSVRLGTFAKEIRLLLPTSIRLNRGNLVLPDLVASANSASLTDMVILHEH 132
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 160
R P A+ I LP GPTA F L +VLR DI N G + P L+ F T+LG RV
Sbjct: 133 RGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHLIFEGFKTKLGKRVV 192
Query: 161 RLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
++++ LFP + G RVVTF N+ D I RHH ++ KDA+
Sbjct: 193 QILKHLFPPREAGKVGNRVVTFVNKEDSIEVRHHVFV------------KTGYKDAE--- 237
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPR T++L ++ G+ + G+ EW TSR++ +L
Sbjct: 238 ---------LAEVGPRMTMRLFEIRGGSLEKGSSGDVEWALTQYTRTSRKKDYL 282
>gi|367038937|ref|XP_003649849.1| hypothetical protein THITE_2108893 [Thielavia terrestris NRRL 8126]
gi|346997110|gb|AEO63513.1| hypothetical protein THITE_2108893 [Thielavia terrestris NRRL 8126]
Length = 296
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 30/249 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S L P++L+TT R S+R +F E+ + P + RG L ++ A
Sbjct: 71 DIDDEYSELSGVVDPRVLVTTSRDPSSRLMSFSKEVRLLFPTAIRLNRGNLVLPDLVRSA 130
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 146
+ + + ++++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 131 QSERLSDVVLLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPRSIKGTVSESYPHL 190
Query: 147 VLNNFATRLGHRVGRLIQSLF----PQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKES 202
+ NF T LG R+ ++++ LF P + + G RV+TF NQ D I RHH Y+
Sbjct: 191 IFENFKTPLGLRIVKILKHLFPPRDPTASKTAGNRVITFVNQDDCIEVRHHVYV------ 244
Query: 203 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPE 262
+TS V L E GPRFT++ S+ GT + K + EW
Sbjct: 245 ----------------RTSYNSV--ELSEVGPRFTMRPFSITMGTLENKDADVEWHLSQY 286
Query: 263 MDTSRRRFF 271
TSR++ +
Sbjct: 287 TRTSRKKNY 295
>gi|429853301|gb|ELA28382.1| u3 small nucleolar ribonucleoprotein imp4 [Colletotrichum
gloeosporioides Nara gc5]
Length = 293
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++LITT R S+R F +L ++P + RGT L+ ++ A T I+ VH +
Sbjct: 83 PRVLITTSRSPSSRLQGFSKDLRLLMPTATVINRGTMTLQDLVRVANATGLTDIVHVHEH 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 160
R P AL I LP GPT F L + R+D+ N GN + P L+ + F+T LG RV
Sbjct: 143 RGTPSALTISHLPHGPTISFSLHNVKTRQDLPNALRGNISESYPHLIFDGFSTGLGKRVQ 202
Query: 161 RLIQSLFP--QSPEFRGRRVVTFHN-QRDFIFFRHHRYIFETKESKGSDANGKKAKDAKS 217
R++Q LFP S G R VTF + D I RHH Y+
Sbjct: 203 RVLQHLFPPRNSSMRAGNRTVTFKRLEDDSIEVRHHLYV--------------------- 241
Query: 218 EKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+T ++ L E GPR T++ S+++ T + + G+ EW T+R++ L
Sbjct: 242 -RTGYDQL--ELSEVGPRVTMRAFSIRNCTLEEREGDVEWQMNHYTRTARKKTVL 293
>gi|46136827|ref|XP_390105.1| hypothetical protein FG09929.1 [Gibberella zeae PH-1]
Length = 298
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 38/266 (14%)
Query: 17 CRPD---DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
RPD ++EL ++ + S I+ P++L+TT R S R AF E+ ++P +
Sbjct: 61 SRPDLTTNEELDLDDEYAQLSGIVD----PRVLVTTSRDPSARLAAFAKEIRLLLPTAVR 116
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG L ++ A+ + +I++H +R P AL + P GPT F L +VLR DI
Sbjct: 117 LNRGNLILPDLVRSAQSAGLSDVILLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDI 176
Query: 134 KN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRD 186
G + P L+ + F +RLG R+ ++++ +FP S G RVVTF N D
Sbjct: 177 PGSVRGTVSESYPHLIFDGFTSRLGERIVKILKHVFPPREAITSKNKVGNRVVTFKNIED 236
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
I RHH ++ G D+ L E GPR T++ ++ G
Sbjct: 237 SIEVRHHVFV-----RTGYDS-------------------VELAEVGPRMTMRPFEIRSG 272
Query: 247 TFDTKGGEFEWVHKPEMDTSRRRFFL 272
T + K G+ EW T++++ +L
Sbjct: 273 TLENKDGDVEWHLTQYTRTAKKKNYL 298
>gi|356605820|gb|AET24969.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis drosophilae]
Length = 178
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 25/203 (12%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT S+R F E+ + PNS RG YD+K++++ + +D T +I+ R
Sbjct: 1 VITTSGDPSSRLKVFSKEMKLIFPNSQRINRGHYDIKQLVQACRAQDTTDLIIFTETRGN 60
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
PD +++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAFFTMTNVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGIRFMTILKH 120
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ +RV+TF N DFI +RHH Y K+++T +
Sbjct: 121 LFP-VPKPDSKRVMTFANTDDFISYRHHVY--------------------KTDETGE--- 156
Query: 226 ITRLQECGPRFTLKLVSLQHGTF 248
L E GPRF L+ ++ GT
Sbjct: 157 -VELTEVGPRFELRPYQIKLGTL 178
>gi|296423840|ref|XP_002841460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637700|emb|CAZ85651.1| unnamed protein product [Tuber melanosporum]
Length = 308
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
D DE A DE+++ L PKILITT R S+R F E+ ++PNS RG
Sbjct: 77 DGDE--AAQVDDEYAT-LSGIVDPKILITTSRDPSSRLLQFSKEIRLLLPNSIRLNRGNA 133
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HG 137
L + + +I++H +R P + I P GPTA F L +VLR DI N G
Sbjct: 134 VLPTLCASCLSTSTSDMILLHEHRGTPTSFTISHFPHGPTALFSLHNVVLRHDIPNSSRG 193
Query: 138 NPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR---GRRVVTFH-NQRDFIFFRHH 193
+ P L+ F+T LG RV +++ LFP R G RVVTF + D+I RHH
Sbjct: 194 TVSESYPHLIFEGFSTPLGKRVVTILKHLFPPREAGRAKEGSRVVTFALTEGDYISVRHH 253
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGG 253
Y+ KT V L E GPR +KL L+ GT D K
Sbjct: 254 VYV----------------------KTGYSSV--ELAEVGPRLEMKLFELRLGTVDNKDA 289
Query: 254 EFEWVHKPEMDTSRRRFFL 272
++EW T+R+R L
Sbjct: 290 DYEWRLSNYTRTARKRDVL 308
>gi|302914532|ref|XP_003051155.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732093|gb|EEU45442.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 298
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L+TT R S R AF E+ ++P + RG L ++ A
Sbjct: 72 DLDDEYAQLSGIVDPRVLVTTSRDPSARLAAFAKEIRLLLPTAVRLNRGNLILPDLVRSA 131
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ + ++++H +R P A+ + P GPT F L +VLR DI G + P L
Sbjct: 132 QSAGLSDVVLLHEHRGTPTAMTLSHFPHGPTISFSLHNVVLRHDIPGSVRGTVSESYPHL 191
Query: 147 VLNNFATRLGHRVGRLIQSLFPQSPEFR-----GRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ + F TRLG RV ++++ +FP G RVVTF N D I RHH ++
Sbjct: 192 IFDGFTTRLGERVVKILKHIFPPREAITAKNKVGNRVVTFKNIEDSIEVRHHVFV----- 246
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G D+ L E GPR T+++ ++ GT + K G+ EW
Sbjct: 247 RTGYDS-------------------VELAEVGPRMTMRVFEIRGGTLENKDGDVEWHLTQ 287
Query: 262 EMDTSRRRFFL 272
T++++ +L
Sbjct: 288 YTRTAKKKNYL 298
>gi|346326263|gb|EGX95859.1| U3 small nucleolar ribonucleoprotein IMP4 [Cordyceps militaris
CM01]
Length = 298
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 35/267 (13%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
DE+ + +EL ++ + S I+ P+IL+TT R S R AF E+ ++P +
Sbjct: 60 DESAEKTTAEELDLDDEYAQLSGIVD----PRILVTTSRDPSARLGAFAKEIRLLLPTAI 115
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG L +++ AK + +I++H +R P A+ + +P GPT F L +VLR D
Sbjct: 116 RLNRGNLILPELVRSAKSSGLSDVILLHEHRGTPTAMTLSHMPHGPTVSFSLHNVVLRHD 175
Query: 133 IKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQR 185
I G + P L+ + F T LG R+ ++++ +FP S G RVVTF N
Sbjct: 176 IPGSVRGTVSESYPHLIFDGFTTPLGKRIVKVLKHMFPPREAITSRNKMGSRVVTFKNID 235
Query: 186 DFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 245
D I RHH ++ G D+ L E GPR T++ ++
Sbjct: 236 DSIEVRHHVFV-----RTGFDS-------------------VELAEVGPRMTMRPFEIRA 271
Query: 246 GTFDTKGGEFEWVHKPEMDTSRRRFFL 272
GT + K G+ EW T++++ +L
Sbjct: 272 GTLENKDGDVEWHLSQYTRTAKKKNYL 298
>gi|387594753|gb|EIJ89777.1| hypothetical protein NEQG_00547 [Nematocida parisii ERTm3]
gi|387596399|gb|EIJ94020.1| hypothetical protein NEPG_00685 [Nematocida parisii ERTm1]
Length = 340
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 137/277 (49%), Gaps = 39/277 (14%)
Query: 1 MTPRTIENTREPDE-TVCRPDDDELFA---GNDADEFSSILKQGCAPKILITTCRFNSNR 56
+ P+ I N + D+ T D ++A G DEFS+ + +ITT R S+
Sbjct: 43 VVPKEIRNEIDEDKLTAEEALQDAIYAFESGEKEDEFSN-----TEARPIITTSRSPSDP 97
Query: 57 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPD 116
F L +++PN+ RG + ++++++ A K + T +I+V+ + P +L+I LP
Sbjct: 98 LVRFAKALKNILPNAEKLNRGKHMIQELVQGAIKNNHTDLIMVNEHSGVPSSLIISHLPH 157
Query: 117 GPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSP-EFRG 175
GPT +F + +I + P +V +NF T LG RV R++ SLFPQ P +
Sbjct: 158 GPTTYFSIH----HPNIDTEEPMSTAAPAVVFDNFTTPLGLRVKRILSSLFPQLPGREKP 213
Query: 176 RRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPR 235
+R+V+F N+ D I F + F+ E LQ+ P+
Sbjct: 214 KRMVSFINREDSILFTQFKTSFKQGE-------------------------VELQKICPQ 248
Query: 236 FTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
FTLKL ++ GT D E E+V +P ++T+R++F+L
Sbjct: 249 FTLKLYEIRAGTLDMTYAEKEFVFRPYLNTARKKFYL 285
>gi|119495332|ref|XP_001264453.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Neosartorya fischeri NRRL 181]
gi|119412615|gb|EAW22556.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Neosartorya fischeri NRRL 181]
Length = 299
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 128/267 (47%), Gaps = 32/267 (11%)
Query: 11 EPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIP 69
E ET + + D +A D DE++ L G P+ ++TT R S R F E+ ++P
Sbjct: 60 ESLETPNKENKDTDYADLD-DEYA--LTSGIIDPRPIVTTSRSPSVRLGTFAKEIRLLLP 116
Query: 70 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 129
S RG L ++ A T ++++H +R P A+ I LP GPTA F L +VL
Sbjct: 117 TSIRLNRGNLVLPDLVSSANAAALTDMVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVL 176
Query: 130 RKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRD 186
R DI N G + P L+ F T+LG RV ++++ LFP + G RVVTF N+ D
Sbjct: 177 RADIPNAARGTVSESYPHLIFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVTFVNKED 236
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
I RHH ++ KT + V L E GPR T++L ++ G
Sbjct: 237 NIEVRHHVFV----------------------KTGYRDV--ELAEVGPRMTMRLFEIRGG 272
Query: 247 TFDT-KGGEFEWVHKPEMDTSRRRFFL 272
+ + G+ EW TS+++ +L
Sbjct: 273 SLEKGSSGDVEWALTQYTRTSKKKDYL 299
>gi|378734811|gb|EHY61270.1| brix-domain ribosomal biogenesis protein [Exophiala dermatitidis
NIH/UT8656]
Length = 296
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 118/247 (47%), Gaps = 30/247 (12%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+S +L P+ L+TT R S R F E+ ++P + RG L ++ AK
Sbjct: 75 DEYS-MLSGLADPRPLVTTSRSPSTRLATFSKEVRLLLPTAIRLNRGNLILPNLLASAKA 133
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVL 148
T I+++H +R P A+ I LP GPTA F L +VLR DI + G + P L+
Sbjct: 134 AALTDIVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVLRADIPDAARGTVSESYPHLIF 193
Query: 149 NNFATRLGHRVGRLIQSLFP--QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSD 206
F TRLG RV ++++ LFP P G RVVTF N D I RHH ++
Sbjct: 194 EGFTTRLGKRVVQILKHLFPPRDGPHKVGNRVVTFKNVDDSIEVRHHVFV---------- 243
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDT 265
+T + V L E GPR T++ ++ GT + GGE EW T
Sbjct: 244 ------------QTGYRDV--ELAEVGPRMTMRCFEIKGGTLEKDSGGEVEWALTQYTRT 289
Query: 266 SRRRFFL 272
R++ +L
Sbjct: 290 GRKKNYL 296
>gi|408397554|gb|EKJ76695.1| hypothetical protein FPSE_03106 [Fusarium pseudograminearum CS3096]
Length = 298
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 38/266 (14%)
Query: 17 CRPD---DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHY 73
RPD ++EL ++ + S I+ P++L+TT R S R AF E+ ++P +
Sbjct: 61 SRPDLTTNEELDLDDEYAQLSGIVD----PRVLVTTSRDPSARLAAFAKEIRLLLPTAVR 116
Query: 74 YKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
RG L ++ A+ + ++++H +R P AL + P GPT F L +VLR DI
Sbjct: 117 LNRGNLILPDLVRSAQSAGLSDVVLLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDI 176
Query: 134 KN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRD 186
G + P L+ + F +RLG R+ ++++ +FP S G RVVTF N D
Sbjct: 177 PGSVRGTVSESYPHLIFDGFTSRLGERIVKVLKHVFPPREAITSKNKVGNRVVTFKNIED 236
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
I RHH ++ G D+ L E GPR T++ ++ G
Sbjct: 237 SIEVRHHVFV-----RTGYDS-------------------VELAEVGPRMTMRPFEIRSG 272
Query: 247 TFDTKGGEFEWVHKPEMDTSRRRFFL 272
T + K G+ EW T++++ +L
Sbjct: 273 TLENKDGDVEWHLTQYTRTAKKKNYL 298
>gi|159131431|gb|EDP56544.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus fumigatus A1163]
Length = 297
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 32/267 (11%)
Query: 11 EPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIP 69
E ET + D +A D DE++ L G P+ ++TT R S R F E+ ++P
Sbjct: 58 ESLETPNKESKDTDYADLD-DEYA--LTSGIIDPRPIVTTSRSPSVRLGTFAKEIRLLLP 114
Query: 70 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 129
S RG L ++ A T ++++H +R P A+ I LP GPTA F L +VL
Sbjct: 115 TSIRLNRGNLVLPDLVASANAAALTDMVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVL 174
Query: 130 RKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRD 186
R DI N G + P L+ F T+LG RV ++++ LFP + G RVVTF N+ D
Sbjct: 175 RADIPNAARGTVSESYPHLIFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVTFVNKED 234
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
I RHH ++ KT + V L E GPR T++L ++ G
Sbjct: 235 NIEVRHHVFV----------------------KTGYRDV--ELAEVGPRMTMRLFEIRGG 270
Query: 247 TFDT-KGGEFEWVHKPEMDTSRRRFFL 272
+ + G+ EW TS+++ +L
Sbjct: 271 SLEKGSSGDVEWALTQYTRTSKKKDYL 297
>gi|400597183|gb|EJP64918.1| brix domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 298
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 13 DETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSH 72
DE+V ++L ++ + S I+ P+IL+TT R S R AF E+ ++P +
Sbjct: 60 DESVDTTTAEQLDLDDEYAQLSGIVD----PRILVTTSRDPSARLGAFAKEIRLLLPTAI 115
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
RG L +++ AK + +IV+H +R P A+ + P GPT F L +VLR D
Sbjct: 116 RLNRGNLILPELVRSAKASGLSDVIVLHEHRGTPTAMTLSHFPHGPTVSFSLHNVVLRHD 175
Query: 133 IKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQR 185
I G + P L+ + F T LG RV ++++ +FP S G RVVTF N
Sbjct: 176 IPGSVRGTVSESYPHLIFDGFETPLGKRVVKVLKHIFPPREPITSKNKMGSRVVTFKNID 235
Query: 186 DFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 245
D I RHH ++ G D+ L E GPR T++ ++
Sbjct: 236 DSIEVRHHVFV-----RTGYDS-------------------VELAEVGPRMTMRPFEIRA 271
Query: 246 GTFDTKGGEFEW 257
GT + K G+ EW
Sbjct: 272 GTLENKEGDVEW 283
>gi|70995844|ref|XP_752677.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
fumigatus Af293]
gi|19577368|emb|CAD28449.1| probable imp4 protein [Aspergillus fumigatus]
gi|42820709|emb|CAF32022.1| imp4 protein, putative [Aspergillus fumigatus]
gi|66850312|gb|EAL90639.1| U3 small nucleolar ribonucleoprotein protein IMP4, putative
[Aspergillus fumigatus Af293]
Length = 299
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 32/267 (11%)
Query: 11 EPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIP 69
E ET + D +A D DE++ L G P+ ++TT R S R F E+ ++P
Sbjct: 60 ESLETPNKESKDTDYADLD-DEYA--LTSGIIDPRPIVTTSRSPSVRLGTFAKEIRLLLP 116
Query: 70 NSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVL 129
S RG L ++ A T ++++H +R P A+ I LP GPTA F L +VL
Sbjct: 117 TSIRLNRGNLVLPDLVASANAAALTDMVLLHEHRGTPTAMTISHLPHGPTASFSLHNVVL 176
Query: 130 RKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFR-GRRVVTFHNQRD 186
R DI N G + P L+ F T+LG RV ++++ LFP + G RVVTF N+ D
Sbjct: 177 RADIPNAARGTVSESYPHLIFEGFKTKLGLRVVQILKHLFPPREAGKVGNRVVTFVNKED 236
Query: 187 FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
I RHH ++ KT + V L E GPR T++L ++ G
Sbjct: 237 NIEVRHHVFV----------------------KTGYRDV--ELAEVGPRMTMRLFEIRGG 272
Query: 247 TFDT-KGGEFEWVHKPEMDTSRRRFFL 272
+ + G+ EW TS+++ +L
Sbjct: 273 SLEKGSSGDVEWALTQYTRTSKKKDYL 299
>gi|402085800|gb|EJT80698.1| U3 small nucleolar ribonucleoprotein IMP4 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 296
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 31/237 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++++TT R S R AF E+ ++P + RG L +++ + + ++++H
Sbjct: 84 PRVMVTTSRDPSARLAAFAKEIRLLLPTAIRLNRGNLILPELVRSVQAAGLSDVVLLHER 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 160
R P AL I +P GPT F L ++LR DI G + P L+ F +RLG RV
Sbjct: 144 RGTPTALTISHMPHGPTVSFSLHNVLLRHDIPGSVRGTVSEAYPHLIFEGFTSRLGQRVV 203
Query: 161 RLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
++++ LFP S RV+TF N D I RHH ++ ES
Sbjct: 204 KVLKHLFPPREPITSKTKMSNRVITFKNIDDVIEVRHHVFVRTGHES------------- 250
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPR ++K+ ++ GT + K G+ EW TSR++ +L
Sbjct: 251 -----------VELAEVGPRMSMKVFEIRGGTLENKDGDVEWHLSQYTRTSRKKNYL 296
>gi|356605818|gb|AET24968.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 2 KK-2011]
Length = 179
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 25/204 (12%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
+ITT S+R F E+ + PNS RG YD+K++++ + +D T +I+ R
Sbjct: 1 VITTSGDPSSRLKVFSKEMRLIFPNSQRINRGHYDIKQLVQACRAQDSTDLIIFTETRGN 60
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
PD +++ LP GPTA F ++ +V+R DI N G + P L+ N ++LG R +++
Sbjct: 61 PDGMIVCHLPFGPTAFFTMTNVVMRHDIPNCGTMSEQYPHLIFNKLDSKLGIRFMTILKH 120
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
LFP P+ +RV+TF N D+I +RHH Y +D G+
Sbjct: 121 LFP-VPKPDSKRVMTFANTDDYISYRHHVY--------KTDEAGE--------------- 156
Query: 226 ITRLQECGPRFTLKLVSLQHGTFD 249
L E GPRF L+ ++ GT +
Sbjct: 157 -VELTEVGPRFELRPYQIKLGTLE 179
>gi|389640679|ref|XP_003717972.1| U3 small nucleolar ribonucleoprotein IMP4 [Magnaporthe oryzae
70-15]
gi|58257405|gb|AAW69324.1| U3 small nucleolar ribonucleoprotein-like protein [Magnaporthe
grisea]
gi|351640525|gb|EHA48388.1| U3 small nucleolar ribonucleoprotein IMP4 [Magnaporthe oryzae
70-15]
gi|440471032|gb|ELQ40069.1| U3 small nucleolar ribonucleoprotein IMP4 [Magnaporthe oryzae Y34]
gi|440490267|gb|ELQ69842.1| U3 small nucleolar ribonucleoprotein IMP4 [Magnaporthe oryzae P131]
Length = 295
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++++TT R S R AF E+ ++P + RG L +++ + + I+++H
Sbjct: 83 PRVMVTTSRDPSARLAAFAKEIRLLLPTAIRLNRGNLILPELVRSVQAAGLSDIVLLHER 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 160
R P AL I +P GPT F L ++LR DI G + P LV + F ++LG R+
Sbjct: 143 RGTPTALTISHMPHGPTVSFSLHNVLLRHDIPGSVRGTVSEAYPHLVFDGFTSKLGQRIV 202
Query: 161 RLIQSLFPQSPEFRGR-----RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
++++ LFP + RV+TF N D I RHH ++ ES
Sbjct: 203 KVLKHLFPPREPITNKAKMSNRVITFKNIDDVIEVRHHVFVRTGHES------------- 249
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L E GPR ++K+ ++ GT + K G+ EW TSR++ +L
Sbjct: 250 -----------VELAEVGPRMSMKVFEIRGGTLENKDGDVEWHLSQYTRTSRKKNYL 295
>gi|356605826|gb|AET24972.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 7 KK-2011]
Length = 175
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 25/200 (12%)
Query: 49 TCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDA 108
T R S+R F E+ V PNS RG YD+K++++ K +D T +I+ R PD
Sbjct: 1 TSRDPSSRLKVFAKEMKLVFPNSQRINRGHYDVKQVVQACKAQDSTDLIIFTETRGNPDG 60
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 168
+++ LP GPTA F L+ +V+R DI N G + P L+ +N ++LG R +++ LFP
Sbjct: 61 MIVCHLPFGPTAFFSLANVVMRHDIPNCGTMSEQYPHLIFDNLNSKLGIRFTTILKHLFP 120
Query: 169 QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITR 228
P+ +RV+TF N DF FR + E A+G+
Sbjct: 121 -IPKTDSKRVLTFANSEDFXXFRESCFKIE--------ADGE----------------VE 155
Query: 229 LQECGPRFTLKLVSLQHGTF 248
L E GPRF LK ++ GT
Sbjct: 156 LTEVGPRFELKPYQIKLGTL 175
>gi|449515363|ref|XP_004164719.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cucumis sativus]
Length = 199
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 6/164 (3%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKK 90
DE+++ PKILITT R S F EL V PN+ RG + +IIE +
Sbjct: 36 DEYAN--ASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRA 93
Query: 91 KDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELV 147
+FT +I+VH +R PD L+I LP GPTA+F L +V R +I K G P ++
Sbjct: 94 HEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPEAYPHII 153
Query: 148 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFR 191
LNNF T+LG R +++ LFP P+ +RVVTF NQ D+I FR
Sbjct: 154 LNNFTTKLGERTANILKHLFP-VPKPDTKRVVTFANQSDYISFR 196
>gi|443925087|gb|ELU44009.1| rRNA primary transcript binding protein [Rhizoctonia solani AG-1
IA]
Length = 1046
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S++ F E+ V PNS RG Y +K++ + + D T ++V+H +
Sbjct: 86 PKIVITTSRDPSSKLLQF--EMRLVFPNSTRINRGNYVVKELADACRANDVTDLVVLHEH 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIK--NHGNPTGHIPELVLNNFATRLGHRVG 160
R PDAL++ P GPT +F L + LR DI N + P L+ F+++LG RV
Sbjct: 144 RGVPDALIVSHFPHGPTLYFSLHNVGLRHDIATYNQSTVSEQYPHLIFEGFSSKLGKRVM 203
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
++ LFP P+ RV+TF N+ DFI FRHH + KT
Sbjct: 204 DALRYLFP-VPKPDATRVMTFANENDFISFRHHVF----------------------AKT 240
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
S ++V +L E GPRF +K + T + + EWV T+++R
Sbjct: 241 SHKEV--QLAEVGPRFEMKRRYAR--TIEQATADKEWVLSHYTRTAKKR 285
>gi|340914926|gb|EGS18267.1| putative U3 small nucleolar ribonucleoprotein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 297
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 111/235 (47%), Gaps = 30/235 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S L P++L+TT R S+R AF E+ + P + RG L ++ A
Sbjct: 72 DIDDEYSELSGIVDPRVLVTTSRDPSSRLMAFSKEIRLMFPTAIRLNRGNLILPDLVMSA 131
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH--GNPTGHIPEL 146
+++ + II++H +R P A+ I P GPT L +VLR DI G + P L
Sbjct: 132 QRERLSDIILLHEHRGTPTAITISHFPHGPTLMASLHNVVLRADIPKSIKGTVSESYPHL 191
Query: 147 VLNNFATRLGHRVGRLIQSLF----PQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKES 202
+ F T LG RV ++++ LF P + G RV+TF NQ D I RHH Y+
Sbjct: 192 IFEGFRTPLGQRVVKILKHLFPPRDPTNNAKSGNRVITFVNQDDCIEVRHHVYV------ 245
Query: 203 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
+T+ V L E GPRFT++ S+ GT + K + EW
Sbjct: 246 ----------------RTNYNSV--ELSEVGPRFTMRPFSITMGTLENKDADVEW 282
>gi|115491921|ref|XP_001210588.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
terreus NIH2624]
gi|114197448|gb|EAU39148.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Aspergillus
terreus NIH2624]
Length = 299
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 28/234 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P+ ++TT R S R F E+ ++P S RG L ++ A T ++++H +
Sbjct: 90 PRPIVTTSRSPSVRLNTFAKEIRLLLPTSIRLNRGNLVLPDLVSSANAAALTDMVLLHEH 149
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVG 160
R P A+ I LP GPTA F L +VLR DI N G + P L+ F T+LG RV
Sbjct: 150 RGTPTAMTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHLIFEGFKTKLGARVV 209
Query: 161 RLIQSLFPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
++++ LFP + G RVV+F N+ D I RHH ++ K
Sbjct: 210 QILKHLFPPREAGKVGNRVVSFVNKEDSIEVRHHVFV----------------------K 247
Query: 220 TSQQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
T + V L E GPR T++L ++ G+ + G+ EW TS+++ +L
Sbjct: 248 TGYRDV--ELAEVGPRMTMRLFEIRGGSMEKGSSGDVEWALTQYTRTSKKKDYL 299
>gi|70934420|ref|XP_738439.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514660|emb|CAH85529.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 263
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 2/194 (1%)
Query: 3 PRTIENTREPDET-VCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PR+I+ DE+ + +++ L + DEFS K P I+IT+ + S F+
Sbjct: 70 PRSIDQLALFDESKINNENENFLLSEKYIDEFSEYFKNNKEPNIIITSIKRPSKNTILFM 129
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN-RREPDALLIIGLPDGPTA 120
EL P+ Y R +DL + + A + DF++ I++ + P + I LP+GPT+
Sbjct: 130 KELTLTFPHIFYEPRLDHDLDFLFKNAIQNDFSTFILIEEGIDKHPKYMFISTLPNGPTS 189
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+ L+ ++ + T PE+ + NF T +G R+ R + +L P +P ++G++VV
Sbjct: 190 KYSLTNIMYAHKKNSDIEITTLPPEVYITNFNTFIGERIKRQLHTLVPFTPNYKGQKVVV 249
Query: 181 FHNQRDFIFFRHHR 194
F+NQRDFIFFRH++
Sbjct: 250 FYNQRDFIFFRHYK 263
>gi|322706854|gb|EFY98433.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Metarhizium
anisopliae ARSEF 23]
Length = 298
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L++T R S R AF E+ ++P S RG L +++ A
Sbjct: 72 DLDDEYAQLSGIVDPRVLVSTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDLVKSA 131
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ + I+++H +R P AL + P GPT F L +VLR DI G + P L
Sbjct: 132 QSAGLSDIVLLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPHL 191
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ + F + LG R+ ++++ LFP S G RVVTF N D I RHH ++
Sbjct: 192 IFDGFTSPLGKRIVKVLKHLFPPREAITSKNKMGNRVVTFKNIEDSIEVRHHVFV----- 246
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G D+ L E GPR T++ ++ GT + K G+ EW
Sbjct: 247 RTGYDS-------------------VELAEVGPRMTMRPFEIRGGTLENKDGDVEWHLSQ 287
Query: 262 EMDTSRRRFFL 272
T++++ +L
Sbjct: 288 YTRTAKKKNYL 298
>gi|322701173|gb|EFY92924.1| U3 small nucleolar ribonucleoprotein protein IMP4 [Metarhizium
acridum CQMa 102]
Length = 298
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 31/251 (12%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ + L P++L++T R S R AF E+ ++P S RG L +++ A
Sbjct: 72 DLDDEYAQLSGIVDPRVLVSTSRDPSARLSAFAKEIRLLLPTSIRMNRGNLILPDLVKSA 131
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPEL 146
+ + I+++H +R P AL + P GPT F L +VLR DI G + P L
Sbjct: 132 QSAGLSDIVLLHEHRGTPTALTLSHFPHGPTVSFSLHNVVLRHDIPGSVRGTVSESYPHL 191
Query: 147 VLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ + F + LG R+ ++++ LFP S G RVVTF N D I RHH ++
Sbjct: 192 IFDGFTSPLGKRIVKVLKHLFPPREAITSKNKMGNRVVTFKNIEDSIEVRHHVFV----- 246
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
G D+ L E GPR T++ ++ GT + K G+ EW
Sbjct: 247 RTGYDS-------------------VELAEVGPRMTMRPFEIRGGTLENKDGDVEWHLSQ 287
Query: 262 EMDTSRRRFFL 272
T++++ +L
Sbjct: 288 YTRTAKKKNYL 298
>gi|346467449|gb|AEO33569.1| hypothetical protein [Amblyomma maculatum]
Length = 262
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F + RG Y++K++IE + + T IVVH
Sbjct: 82 PKIVVTTSRDPSSKLKQFAKRM----------NRGGYEMKQLIEACRANEVTDFIVVHET 131
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L++ LP GPTA+F + V+R DI N G + P L+ +NF TRLG +
Sbjct: 132 RGNPDGLVVCHLPYGPTAYFTILNTVMRHDIPNIGTMSEAYPHLIFHNFKTRLGXXXMNI 191
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
++ LFP P+ RV+TF NQ D+I FRHH +
Sbjct: 192 LKYLFP-VPKEDSHRVITFANQDDYISFRHHTF 223
>gi|323453823|gb|EGB09694.1| hypothetical protein AURANDRAFT_71380 [Aureococcus anophagefferens]
Length = 449
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 29/233 (12%)
Query: 27 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIE 86
G+ DE++ L+ K+ + T R S+R F EL ++PN+ RG + +++
Sbjct: 71 GSLDDEYARTLRGERLAKVCVCTSRDPSSRLKQFAKELKHMVPNATRVNRGNTRVGDLVD 130
Query: 87 YAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN-PTGHIPE 145
++ +FT +++VH R +PD L++ LP GPT +F LS VLR DI + P
Sbjct: 131 ATRRGEFTDLVMVHETRGQPDGLVVCHLPLGPTTYFTLSNCVLRHDIDAPPPFSSDAPPH 190
Query: 146 LVLNNF--ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK 203
LV ++F RL R+ ++Q LFP P+ +RV TF+N D I FRHH Y E
Sbjct: 191 LVFHDFDDGKRLAKRLKTVLQCLFP-VPKADAKRVCTFYNAADRISFRHHTY-----ERD 244
Query: 204 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFE 256
G D + L E GPRF + ++ GT D + E
Sbjct: 245 GPDVH--------------------LTELGPRFEMTPYMIKLGTLDQADADVE 277
>gi|164429072|ref|XP_957290.2| hypothetical protein NCU00404 [Neurospora crassa OR74A]
gi|157072398|gb|EAA28054.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 410
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 33/242 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTSI 96
PKIL+TT + A ++ ++ PNS Y +R Y +++I ++AK + +T +
Sbjct: 190 PKILVTTHLNGTIHKEA--EDIAAIFPNSTYIRRSAHAYGHKYSVREIAKFAKNRGYTIL 247
Query: 97 IVVHTNRREPDALLIIGL-----PDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNF 151
++V + ++P +L +I L GP+ + + + K + HGNPT H
Sbjct: 248 MIVGEDLKKPSSLTVIHLNGEDVAPGPSLTYTIRNYLPGKALLGHGNPTNHY-------- 299
Query: 152 ATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKK 211
T LG + + ++FP PE GR+VVT HNQRD+IFFR HRY+F +E++ ++ N
Sbjct: 300 -TPLGILAAKSMHTMFPPRPELSGRQVVTLHNQRDYIFFRRHRYVF--REARTTEKNVVT 356
Query: 212 AKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE-FEWVHKPEMDTSRRRF 270
A+ + E Q + LQE GP + G ++G + +W K +M+ R RF
Sbjct: 357 AEGKEME--GMQGIRAGLQEIGP------MDKGIGRAGSEGEDALKWEWKAKMEKVRTRF 408
Query: 271 FL 272
L
Sbjct: 409 NL 410
>gi|197127331|gb|ACH43829.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
gi|197127332|gb|ACH43830.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
gi|197127333|gb|ACH43831.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
Length = 290
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S R F EL ++P + RG +L ++ + T ++V+H
Sbjct: 83 PKVMVTTSRDPSARLRLFAKELCLLLPGARRMNRGRAELGALVAACRAAGVTDLLVLHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L + LP GPTAHF LS VLR+++ G P L+L + LG RVG +
Sbjct: 143 RGRPDGLTVSHLPHGPTAHFTLSGAVLRQEVGGLGGAPLAAPHLLLLRLDSTLGKRVGTI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P RRVVTF N+ D I R+H Y +
Sbjct: 203 LKHLFP-VPRPDSRRVVTFANEDDVILVRNHVY-------------------------RR 236
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
+ L+E GPRF L+ ++ GT + + EW P T+ +R L
Sbjct: 237 RGRTVELEEVGPRFQLRPYLIRLGTLEQGDAADVEWRWHPYTATAPKRRLL 287
>gi|350539031|ref|NP_001232356.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
gi|197127330|gb|ACH43828.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
Length = 290
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S R F EL ++P + RG +L ++ + T ++V+H
Sbjct: 83 PKVMVTTSRDPSARLRLFAKELCLLLPGARRMNRGRAELGALVAACRAAGVTDLLVLHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PD L + LP GPTAHF LS VLR+++ G P L+L + LG RVG +
Sbjct: 143 RGRPDGLTVSHLPHGPTAHFTLSGAVLRQEVGGLGGAPLAAPHLLLLRLDSTLGKRVGTI 202
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P RRVVTF N+ D I R+H Y +
Sbjct: 203 LKHLFP-VPRPDSRRVVTFANEDDVILVRNHVY-------------------------RR 236
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
+ L+E GPRF L+ ++ GT + + EW P T+ +R L
Sbjct: 237 RGRTVELEEVGPRFQLRPYLIRLGTLEQGDAADVEWRWHPYTATAPKRRLL 287
>gi|349501006|ref|NP_001231768.1| ribosome production factor 1 isoform 2 [Danio rerio]
Length = 249
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 83/135 (61%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TIEN R DET P+D+E+ DEFS+ + PK+LITT R F
Sbjct: 104 VPKTIENQRIYDETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFC 163
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAH 121
+L +VIP+++ Y R LKK+I + FT ++V++ +R+ P+ +++ LPDGPTAH
Sbjct: 164 DQLATVIPHAYVYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAH 223
Query: 122 FKLSKLVLRKDIKNH 136
FK+S + LRK++K H
Sbjct: 224 FKVSSVRLRKEMKRH 238
>gi|355784806|gb|EHH65657.1| hypothetical protein EGM_02464 [Macaca fascicularis]
Length = 261
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 109/231 (47%), Gaps = 56/231 (24%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P A++ + +IV H
Sbjct: 83 PKVMITTSRDPSSRLKMFAKELKLVFPG-----------------AQRMNRVGLIVSH-- 123
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +
Sbjct: 124 -----------LPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDI 172
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
++ LFP P+ RV+TF NQ D+I FRHH Y +KT
Sbjct: 173 LRYLFP-VPKDDSHRVITFANQDDYISFRHHVY----------------------KKTDH 209
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
+ V L E GPRF LKL ++ GT + + + EW P +T+R+R FL
Sbjct: 210 RNV--ELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 258
>gi|339238423|ref|XP_003380766.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichinella spiralis]
gi|316976305|gb|EFV59625.1| U3 small nucleolar ribonucleoprotein IMP4 [Trichinella spiralis]
Length = 520
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 102/211 (48%), Gaps = 46/211 (21%)
Query: 43 PKILITTCRFNSNRGPAF--------------ISELLSVIPNSHYYKRGTYDLKKIIEYA 88
PKI+ITT S++ F EL + PN RG Y++KK+++
Sbjct: 83 PKIVITTSHDPSSKLKQFAKLLLHHLLLVLGPFQELKILFPNCQRINRGQYEMKKLVDAC 142
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 148
+ D T I+V +R PD + I LP GPTA+F LS +V+R D+ + G + P L+
Sbjct: 143 RANDVTDFILVQEHRGVPDGITICHLPFGPTAYFTLSNVVMRHDVPDVGKMSEQYPHLIF 202
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
+NF ++LG R LFP P+ RRVVTF + DFI FRHH Y
Sbjct: 203 HNFTSQLGKR------HLFP-VPKEDSRRVVTFSVEDDFISFRHHVY------------- 242
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
+K + + V+T E GPRF +K
Sbjct: 243 ---------KKVNNEIVLT---EVGPRFEMK 261
>gi|302422302|ref|XP_003008981.1| U3 small nucleolar ribonucleoprotein IMP4 [Verticillium albo-atrum
VaMs.102]
gi|261352127|gb|EEY14555.1| U3 small nucleolar ribonucleoprotein IMP4 [Verticillium albo-atrum
VaMs.102]
gi|346970143|gb|EGY13595.1| U3 small nucleolar ribonucleoprotein IMP4 [Verticillium dahliae
VdLs.17]
Length = 293
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 30/252 (11%)
Query: 26 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 85
A + D+ + P+IL+TT R S+R AF E+ + P S RG L ++
Sbjct: 67 AADQLDDEYAATSGLSEPRILVTTSRDPSSRLAAFSKEIRLLFPTSVRLNRGNLILPDLV 126
Query: 86 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPE 145
+K + ++++ +R P AL + LP GPT F L +V+ +IK+ G + P
Sbjct: 127 MSSKTNGLSDLVLLSEHRGTPTALTVSHLPFGPTVSFSLHNVVMMAEIKSLGTVSEQYPH 186
Query: 146 LVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
L+ F + LG R+ +++ LFP S G RVVTF N+ D I RHH ++
Sbjct: 187 LIFEGFKSPLGKRIVTVLKHLFPPREPITSKNQVGSRVVTFVNEDDCIEVRHHVFV---- 242
Query: 201 ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 260
+TS V L E GPR T++ ++ GT + K G+ EW
Sbjct: 243 ------------------RTSYDSV--ELAEVGPRMTMRPFEVRAGTLEAK-GDVEWHLS 281
Query: 261 PEMDTSRRRFFL 272
T R++ +L
Sbjct: 282 QYTRTGRKKNYL 293
>gi|7271067|emb|CAB77655.1| hypothetical protein [Candida albicans]
Length = 97
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 28/124 (22%)
Query: 149 NNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
NNF +RLG VGRL QS+FP PE +GR+V+T HNQRD+IFFR HRYIF +E G
Sbjct: 2 NNFNSRLGKTVGRLFQSIFPHKPELQGRQVITLHNQRDYIFFRRHRYIFRNEEKVG---- 57
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
LQE GP+FTLKL +Q G G+ W H+P+M+ ++
Sbjct: 58 --------------------LQELGPQFTLKLRRMQKGV----RGDVVWEHRPDMERDKK 93
Query: 269 RFFL 272
+F+L
Sbjct: 94 KFYL 97
>gi|399950022|gb|AFP65678.1| ribosome production factor 1 [Chroomonas mesostigmatica CCMP1168]
Length = 188
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 23/194 (11%)
Query: 47 ITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 106
ITT S + I + L ++ S Y+KR + +K+I+ Y K K+ ++++ +
Sbjct: 11 ITTSSQPSKKLLYIIKDFLKILDGSKYFKRKKFKIKQILCYLKSKEIKTLLIFKEKKNWA 70
Query: 107 DALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSL 166
+ II + + + HF+L ++L+K+ +++ + + PE++L NF + G + L+++L
Sbjct: 71 YDIWIINMREKVSIHFQLKSILLKKNFQDNNDSVSYKPEIILKNFNNKTGKIIFFLLKNL 130
Query: 167 FPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 226
FP SP F+ R VV+F + + IFFR +RYIF G D
Sbjct: 131 FPFSPNFKNRNVVSFFYRNNLIFFRFYRYIFSL---SGKDV------------------- 168
Query: 227 TRLQECGPRFTLKL 240
+LQE GPRF +
Sbjct: 169 -KLQELGPRFIFRF 181
>gi|348585861|ref|XP_003478689.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cavia porcellus]
Length = 252
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 87/166 (52%), Gaps = 26/166 (15%)
Query: 108 ALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLF 167
L++ LP GPTA+F L +V+R DI + G + P L+ + F++RLG RV +++ LF
Sbjct: 109 GLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKPHLIFHGFSSRLGRRVSDILRYLF 168
Query: 168 PQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVIT 227
P P+ RV+TF NQ D+I FRHH Y KKA E
Sbjct: 169 P-VPKDDSHRVITFANQDDYISFRHHVY--------------KKADHCNIE--------- 204
Query: 228 RLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
L E GPRF LKL ++ GT D + + EW P +TSR+R FL
Sbjct: 205 -LTEVGPRFELKLYMIRLGTLDQEATADVEWRWHPYTNTSRKRLFL 249
>gi|403418112|emb|CCM04812.1| predicted protein [Fibroporia radiculosa]
Length = 355
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 108/232 (46%), Gaps = 44/232 (18%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F K G E + D T ++++H +
Sbjct: 141 PKIIVTTSRDPSSKLQQFA-------------KAGDAS----PEACRANDVTDLVILHEH 183
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRVG 160
R PDA+++ P GPT F L + LR DI ++ T P L+ NF + LG R+
Sbjct: 184 RGTPDAMIVSHFPHGPTVFFTLHNVNLRHDINSYKESTVSEQYPHLIFENFGSTLGERIR 243
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
+++ LFP P+ +RV+TF N+ DFI FRHH ++ K
Sbjct: 244 DVLRYLFP-VPKEDSKRVMTFSNEDDFISFRHHVFM----------------------KI 280
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++V +L E GPRF +K ++ GT + E EWV T+++R L
Sbjct: 281 PPRQV--QLAEVGPRFEMKPYEIRQGTIEQTEAEREWVLAHYSRTAKKRSLL 330
>gi|297850768|ref|XP_002893265.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339107|gb|EFH69524.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 116/246 (47%), Gaps = 30/246 (12%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILIT---TCRFN--SNRGPAFISELLSVIPNSHY- 73
DDDEL+A + + +L PK LIT R+ RG E+LSV PNS Y
Sbjct: 26 DDDELWAEFEPEGIDRVLSGEIKPKTLITNYGVLRYRRFPQRGALIAKEMLSVFPNSTYI 85
Query: 74 -YKRG-TYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRK 131
+K G + LK++I AK++ TS+++ TN D + I+ L +G A F + L+ R+
Sbjct: 86 KWKWGFSNSLKELIGIAKERACTSLVLARTNSDGYDEIRIVSLLNGAAAEFSVLNLIPRE 145
Query: 132 DIKNHGNPTGHI-PELVLNNFATRLGHRVGRLIQSLFPQ---SPEFRG---RRVVTFHNQ 184
DI + +P + PE+ + F + RLIQSLFP+ S G R + F NQ
Sbjct: 146 DIPDQASPPIRLYPEVNMGLFTSPASVGAARLIQSLFPKVTDSGPRNGACRRNIAFFQNQ 205
Query: 185 RDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQ 244
+ I +RH+ N + + T KV + ECGP+F L L +L
Sbjct: 206 KGCIHYRHY-------------WNHAEEVSRVGDGTRVMKVTKK--ECGPQFVLMLTALS 250
Query: 245 HGTFDT 250
+T
Sbjct: 251 KIAVET 256
>gi|401411203|ref|XP_003885049.1| putative U3 small nucleolar ribonucleoprotein protein [Neospora
caninum Liverpool]
gi|325119468|emb|CBZ55021.1| putative U3 small nucleolar ribonucleoprotein protein [Neospora
caninum Liverpool]
Length = 254
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S+R F+ EL +IPNS RG Y + ++E + T +I++H +
Sbjct: 84 PKVVLTTSRNPSSRLQQFVKELRLLIPNSQRINRGGYVVNDLVELCRSNSVTDLIIIHEH 143
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTGHIPELVLNNFATRLGHRVGR 161
R +PDA+++ LP GP AHF LS + LR D+ + N + P LV +NF +R+
Sbjct: 144 RGQPDAMVVCHLPHGPAAHFNLSGVALRHDLPEKPANMSEAAPHLVFHNFTSRVDEE--- 200
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
S E RGR
Sbjct: 201 -------NSAEKRGR--------------------------------------------- 208
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP 261
L E GPRFTLK + GT + K E EW +P
Sbjct: 209 -----LELVEVGPRFTLKPYRIDLGTAEMKDVETEWAVRP 243
>gi|345569733|gb|EGX52562.1| hypothetical protein AOL_s00007g550 [Arthrobotrys oligospora ATCC
24927]
Length = 277
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 31 DEFSSILKQGCA-PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAK 89
DE++++ G A PK+LITT R S+R F E+ + P S RG L ++
Sbjct: 75 DEYAAL--SGVAEPKLLITTSRDPSSRLMQFAKEMRLLFPTSIRLNRGNTVLPQLAASCL 132
Query: 90 KKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELV 147
+ ++++H +R P AL + P GPTA F L +VLR DI N G + P L+
Sbjct: 133 ATSISDLLLLHEHRGVPTALTVSHFPHGPTAMFSLHNVVLRHDIDNSARGTVSEAYPHLI 192
Query: 148 LNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH-NQRDFIFFRHHRYIFETKESKGSD 206
F+T LG RV +++ LFP + RVVTF + D+I RHH Y+
Sbjct: 193 FEGFSTPLGKRVVTILKHLFPPGVKKDSARVVTFALTEGDYISVRHHVYV---------- 242
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 247
KT + V L E GPR +K+ L+ T
Sbjct: 243 ------------KTGPKTV--ELAEVGPRMEMKVDILKLST 269
>gi|320591910|gb|EFX04349.1| u3 small nucleolar ribonucleoprotein protein imp4 [Grosmannia
clavigera kw1407]
Length = 294
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 121/272 (44%), Gaps = 56/272 (20%)
Query: 18 RPD---DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 74
RPD D++L D D+ + L P++L+TT R +S R AF E+ ++P S
Sbjct: 62 RPDLNADEQL----DLDDEYAQLSGLVDPRVLVTTSRSSSTRLTAFSKEMRLLLPTSIRL 117
Query: 75 KRGTY-----DLKKII--EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKL 127
RG DL + Y +D T N R I LP GPT F L +
Sbjct: 118 NRGNMILDDCDLCMLFPPNYLMYEDLTD------NGRS-----ISHLPHGPTVSFSLHNV 166
Query: 128 VLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP-----QSPEFRGRRVVT 180
++R DI G+ + P L+ F +RLG+R+ ++++ LFP S RVV
Sbjct: 167 LMRGDIPGSIRGSVSEAYPHLIFEGFTSRLGNRICKVLKHLFPPRDPITSKTKLSNRVVV 226
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
F N D I RH+ Y+ KT+ KV L E GPR ++KL
Sbjct: 227 FKNIEDVIELRHYVYV----------------------KTAYDKV--ELSEVGPRMSMKL 262
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+++GT + K G EW TSR++ +L
Sbjct: 263 FEVRNGTLENKDGHVEWHLNQFTRTSRKKDYL 294
>gi|256082452|ref|XP_002577470.1| U3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
gi|360044626|emb|CCD82174.1| putative u3 small nucleolar ribonucleoprotein [Schistosoma mansoni]
Length = 255
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 1 MTPRTI-ENTREPDETVCRPDDD-ELFAGNDADEFSSILKQGCA-PKILITTCRFNSNRG 57
M P+ I E + +E + DD E A N DE+ L G P+++ITT R S++
Sbjct: 44 MLPKEIQEGALQLNEELDWSDDGGEGVATNQDDEY---LWAGTEDPRVVITTSRSPSSKL 100
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDG 117
F EL +IPN+ RG Y K ++E K T +I+V+ +R PD L+I LP G
Sbjct: 101 KEFAKELRFLIPNAAKINRGNYLNKNLLEACLAKQITDVIIVNESRGVPDTLIISHLPFG 160
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGH-----IPELVLNNFATRLGHRVGRLIQSLFPQSPE 172
PTA F L + R D++ G TG P + + LG RV +++ LFP P+
Sbjct: 161 PTAIFTLYNVRTRHDMETMGCGTGAKMPQTYPNHIFKGLNSNLGQRVRCILKHLFP-VPK 219
Query: 173 FRGRRVVTFHNQRDFIFFR 191
+RVVT++ + D I FR
Sbjct: 220 DDSKRVVTWYEEDDVICFR 238
>gi|399949744|gb|AFP65401.1| U3 snoRNP protein, IMP4 [Chroomonas mesostigmatica CCMP1168]
Length = 211
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P I +TT RF S F E+ + PNS + RG++ +K++I T +I++H +
Sbjct: 6 PLIFVTTSRFPSLNLLKFTKEIRYIFPNSKFLNRGSFFIKRLITTCLYNQGTDLIMIHEH 65
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R PDA +I LP GP+A F + K + DIK G P L+++N + LG R+ +
Sbjct: 66 RGNPDAFVISHLPKGPSAFFCIKKFLFSFDIKKKGF-FHQSPNLIVDNLESPLGKRLSNI 124
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
+ SLF P+ +R++TF + + I RHH +
Sbjct: 125 LCSLF-CPPQRNSKRIITFSGKENHILVRHHLF 156
>gi|294936903|ref|XP_002781904.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|239893028|gb|EER13699.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
Length = 292
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 50/203 (24%)
Query: 5 TIENTREPDETVCRPD-DDELFAGNDADEF----------SSILKQGCAP---------- 43
TIE RE D T+ P+ D+E+ A DEF S +L G A
Sbjct: 85 TIEMMREADVTMLPPEGDEEVRADERMDEFRHTFPTPPPTSEVLPLGQAAAGEDTPSTVP 144
Query: 44 ----------------------KILITTCR-FNSNRGPAFISELLSVIPNSHYYKRGTYD 80
KI++TT + S R I EL+ V+P Y+++ +
Sbjct: 145 TTVEAGQDEGEEEEEQREPVEPKIMLTTSMAYPSERSYGLIKELVEVVPGLQYFRKKHFP 204
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRR-EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHG-- 137
+ KI ++A + FT+++V+ +R+ EP +L I LP+GPT++++L+ L L D+K HG
Sbjct: 205 ITKICDFANNRGFTAVVVLSEDRKHEPSSLHITSLPEGPTSYWRLTSLELGADMK-HGAT 263
Query: 138 -NPTGHIPELVLNNFATRLGHRV 159
NP PEL+LN F TRLGHR+
Sbjct: 264 CNPEDR-PELLLNGFGTRLGHRL 285
>gi|56754817|gb|AAW25591.1| SJCHGC08420 protein [Schistosoma japonicum]
Length = 116
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 72/125 (57%), Gaps = 13/125 (10%)
Query: 152 ATRLGHRVGRLIQSLFPQSPEFRGR---RVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
TRLG R R++ LFP + R + FHNQRD+IFFRH+RYI S D N
Sbjct: 1 MTRLGLRTERILSGLFPNDSRLLPQPHSRTIVFHNQRDYIFFRHYRYIHRNTIS-NDDGN 59
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVH-KPEMDTSR 267
K K +++E + + E GP+FTLKL S+Q GTFD++ G +EWV K E+ SR
Sbjct: 60 ENKTK-SRNEHIA-------MNEVGPKFTLKLRSIQLGTFDSQFGNYEWVRKKTEIGRSR 111
Query: 268 RRFFL 272
R F L
Sbjct: 112 RTFVL 116
>gi|62318955|dbj|BAD94054.1| putative U3 small nucleolar ribonucleoprotein [Arabidopsis
thaliana]
Length = 113
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 23/129 (17%)
Query: 144 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK 203
P L+ NNF T++G RVG +++ +FP +P+ +R+VTF NQ D+I FR+H Y K
Sbjct: 6 PHLIFNNFTTQMGQRVGNILKHIFP-APKLDAKRIVTFSNQSDYISFRNHVY------DK 58
Query: 204 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 263
G G K+ L+E GPRF L+L ++ GT + E EWV +P M
Sbjct: 59 GE--GGPKS--------------IELKEIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYM 102
Query: 264 DTSRRRFFL 272
+TS++R F+
Sbjct: 103 NTSKKRKFI 111
>gi|154284099|ref|XP_001542845.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411025|gb|EDN06413.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 110
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
L +SLFP PE GR+VVT HNQRD+IF R HRY+F K G K+ K
Sbjct: 6 LFRSLFPPQPELEGRQVVTLHNQRDYIFVRRHRYVFREKRETEKSVVGPDGKEMK----G 61
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ V T LQE GPRFTLKL + G G E+EW K M+ R +F L
Sbjct: 62 VEGVRTGLQELGPRFTLKLRRIDKGIQRVSGQEWEW--KGGMEKQRTKFQL 110
>gi|195436145|ref|XP_002066033.1| GK19236 [Drosophila willistoni]
gi|194162118|gb|EDW77019.1| GK19236 [Drosophila willistoni]
Length = 154
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 27/161 (16%)
Query: 107 DALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSL 166
D L++ LP G TA F S +V+R I + G + L+ NNF + +G R ++++ L
Sbjct: 1 DGLVVCHLPYGHTAFFNTSDVVMRHAIPDIGKMSEQKHHLIFNNFKSTIGLRTVQILKQL 60
Query: 167 FPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVI 226
FP P+ +R++TF N D I FRHH+Y + +E
Sbjct: 61 FP-VPKENSQRLITFLNHNDSIIFRHHQYKYVNRE------------------------- 94
Query: 227 TRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTS 266
L+E GPRF LKL ++ GT + K + +WV++P ++TS
Sbjct: 95 LELKEVGPRFQLKLYEIKLGTLENIKAADSQWVNRPYLNTS 135
>gi|355717134|gb|AES05834.1| brix domain containing 5 [Mustela putorius furo]
Length = 213
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DETV P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETVVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 111
+L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++
Sbjct: 161 EQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVINEDRKTPNGLIL 210
>gi|156097881|ref|XP_001614973.1| U3 small nucleolar ribonucleoprotein protein [Plasmodium vivax
Sal-1]
gi|148803847|gb|EDL45246.1| U3 small nucleolar ribonucleoprotein protein, putative [Plasmodium
vivax]
Length = 347
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 42/265 (15%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++LITT R S++ F E +IPNS RG+Y +K I+ +A+K + T +I++H
Sbjct: 81 PRVLITTSRNPSSQLECFAKEFKLLIPNSEKINRGSYFIKDILNFARKNNITDVIIIHEY 140
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGR 161
+ P L+I LP GPT + +R + + G+ + P L+ +NF T LG R+
Sbjct: 141 KGIPRNLIICHLPFGPTLFCTIKDCKMRHEFTDQLGSVSSCNPHLIFHNFNTDLGKRIMS 200
Query: 162 LIQSLFP-----------QSPEFRGRRVVTFHNQRDF----------------------I 188
+ + LFP +G+R + Q D I
Sbjct: 201 IFKYLFPPVKMRMNKRRVALSRRKGQRGASNEEQTDLQNNSGKVHTIDVGDDQEDDELQI 260
Query: 189 FFRHHRYIFETKESKGS------DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
F+++ Y F+ ++ + + + N + +TS++ I L E GPRF+ +
Sbjct: 261 TFKNNEY-FDLQKFENNRVITFFNKNDVIYFRHYNWETSEKGEIV-LNEVGPRFSFMVYK 318
Query: 243 LQHGTFDTKGGEFEWVHKPEMDTSR 267
+ T D+ ++E+V++P +++ +
Sbjct: 319 INKETVDSLNEDYEYVYRPFLNSRK 343
>gi|344303772|gb|EGW34021.1| hypothetical protein SPAPADRAFT_59430, partial [Spathaspora
passalidarum NRRL Y-27907]
Length = 216
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYA 88
D D+ S + PK++ITT R S R F E+ + PNS RG Y + +++
Sbjct: 67 DIDDEYSAMSGISDPKVIITTSRDPSVRLLQFSKEIKLMFPNSLKLNRGNYVIPDLVKTC 126
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVL 148
+ + +I++H +R P +L + P GPTA F L + LR D+ N GN + P L+
Sbjct: 127 SRVAVSDVIILHEHRGVPTSLTVSHFPHGPTAVFTLHNVKLRHDLPNLGNVSESYPHLIF 186
Query: 149 NNFATRLGHRVGRLIQSLFP 168
F + LG RV +++Q LFP
Sbjct: 187 EGFNSNLGKRVVKILQHLFP 206
>gi|388500378|gb|AFK38255.1| unknown [Medicago truncatula]
Length = 110
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 24/129 (18%)
Query: 144 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK 203
P ++L+NF T+LG R +++ LFP P+ +R+VTF N+ D+I FRHH Y
Sbjct: 6 PHIILDNFETKLGERTANILKHLFP-VPKPDTKRIVTFANKSDYISFRHHIY-------- 56
Query: 204 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 263
EK + K + L+E GPRF L+L ++ GT D + EWV +P M
Sbjct: 57 --------------EKQAGPKSV-ELKEIGPRFELRLYQIKLGTVDQAEAQTEWVIRPYM 101
Query: 264 DTSRRRFFL 272
+T+R+R FL
Sbjct: 102 NTTRKRNFL 110
>gi|297822547|ref|XP_002879156.1| hypothetical protein ARALYDRAFT_344625 [Arabidopsis lyrata subsp.
lyrata]
gi|297324995|gb|EFH55415.1| hypothetical protein ARALYDRAFT_344625 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
DDD+L+AG D +E C P+ RGP ELLSV PNS Y G
Sbjct: 18 DDDKLWAGFDWEETE------CYPQ-----------RGPLIAKELLSVFPNSRYMIIGIR 60
Query: 80 D-LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN 138
L+++I AK++ FTS+I+ HTN D L+II L +G +A F++ + N N
Sbjct: 61 SKLQEVIALAKRRRFTSLILTHTNSLGHDILIIISLLNGASAVFRVIDFIPH---LNCAN 117
Query: 139 PTG--HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVV 179
P PEL + +F ++ R+IQ+LFP+ P GR V
Sbjct: 118 PPSRPRYPELHMKSFNSQASVGTARMIQALFPKVPSSGGRPVA 160
>gi|401828284|ref|XP_003888434.1| brix domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392999706|gb|AFM99453.1| brix domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 269
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 42/249 (16%)
Query: 21 DDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD 80
D+ ++ G +E+ PK+++TT R S++ F S+ LS++ + + RG
Sbjct: 54 DEIIYEGKIEEEYR-------YPKVMVTTSRNPSSQLLHF-SKQLSLVLDGENFIRGQLR 105
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 140
++I + A K +T +I+VH NR P +L+I P GPT F ++ I P
Sbjct: 106 EEEISDVAHKHGYTCVIIVHENRGRPASLVISYFPFGPTMKFT----IIDHFITRRAFPL 161
Query: 141 GHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
V +N +G ++ + LFPQ +R+V+ N+ D I FRH Y+ E
Sbjct: 162 SPKSYFVCDNMEGPIGKKIKERMALLFPQCSG--AKRIVSLVNRNDTIAFRH--YLIE-- 215
Query: 201 ESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHK 260
+ +KT+ K + LK ++ GTF+ GEFEW +K
Sbjct: 216 ---------------RGDKTTLNKSLG--------MDLKAYEIRKGTFEM-DGEFEWAYK 251
Query: 261 PEMDTSRRR 269
P M++ R R
Sbjct: 252 PYMNSRRTR 260
>gi|160331061|ref|XP_001712238.1| imp4 [Hemiselmis andersenii]
gi|159765685|gb|ABW97913.1| imp4 [Hemiselmis andersenii]
Length = 211
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 28/232 (12%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI ITT R S+ F +L ++ NS+ RG L +IE K T II++H +
Sbjct: 6 PKIFITTSRLPSSILIKFTKDLENIFSNSYKLCRGRKFLSNLIEICISKGGTDIILIHEH 65
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVL--RKDIKNHGNPTGHIPELVLNNFATRLGHRVG 160
R PDAL+I LP GP+A+F + K+V +K K + N HI +++N +++G R+
Sbjct: 66 RGVPDALVISHLPKGPSAYFTIKKVVFCPKKWKKRNNNLPPHI---LIDNLNSQIGKRLC 122
Query: 161 RLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKT 220
I S P F+ +R+++F + + I FRH Y +K
Sbjct: 123 G-IFSSLFSFPSFKSKRIISFIGKNNQILFRHFLY----------------------QKK 159
Query: 221 SQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+K + L E GP F + + G F K + EW + ++ +R FL
Sbjct: 160 RIKKKASLLHELGPSFDMFPFKISLGNFGEKNQKIEWNFTSFIKSNGKRSFL 211
>gi|239790686|dbj|BAH71889.1| ACYPI008315 [Acyrthosiphon pisum]
Length = 187
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 1 MTPRTIENTREPDETVCRPDDDE-------LFAGNDADEFSSILKQGCAPKILITTCRFN 53
PRTIENTREPD TV DD++ L A + DEF+ PK+LIT
Sbjct: 58 QVPRTIENTREPDSTVLHSDDEDYDQKAQDLAAEFEHDEFADYYSHLYKPKVLITYKAKP 117
Query: 54 SNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG 113
+ F L ++PNS R K+ I+ A K +T +I+++ +R EP+ L+++
Sbjct: 118 LRKVREFGKILTEIVPNSVRIFRRDASAKETIQAAINKGYTDLIIINEDRNEPNGLILVH 177
Query: 114 LPDGPTAHFK 123
LPDGPTA+F+
Sbjct: 178 LPDGPTAYFR 187
>gi|19074991|ref|NP_586497.1| IMP4-LIKE U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN (snoRNP)
[Encephalitozoon cuniculi GB-M1]
gi|19069716|emb|CAD26101.1| IMP4-LIKE U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN (snoRNP)
[Encephalitozoon cuniculi GB-M1]
gi|449328663|gb|AGE94940.1| imp4-like U3 small nucleolar ribonucleoprotein [Encephalitozoon
cuniculi]
Length = 269
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S++ F ++ LS++ N + RG +++ + A K +T +I+VH N
Sbjct: 69 PKVMVTTSRSPSSQLLHF-AKHLSLVLNGENFIRGQLREEEVSDVAHKYGYTCVIIVHEN 127
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P +L + P GPT F + L + P V +N +G ++
Sbjct: 128 RGRPASLAVSYFPFGPTMRFTIIDHFLTR----RAFPLAPKAYFVCDNMEGTVGIKIKEK 183
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
+ LFPQ R +R+V+ N+ D I FRH Y+ E NG + +KS
Sbjct: 184 MALLFPQCS--RAKRIVSLVNRNDTIAFRH--YLIE---------NGDRTTLSKS----- 225
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
G L+ ++ GTF+ GEFEW +KP M++ R R
Sbjct: 226 ---------LG--MDLRAYEIRKGTFEM-DGEFEWAYKPYMNSRRTR 260
>gi|242094592|ref|XP_002437786.1| hypothetical protein SORBIDRAFT_10g002555 [Sorghum bicolor]
gi|241916009|gb|EER89153.1| hypothetical protein SORBIDRAFT_10g002555 [Sorghum bicolor]
Length = 50
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Query: 86 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH 136
+YAK ++FTS+IVV TNRREPDALLIIGLPDGPTAHFKLSKLVL KDI H
Sbjct: 1 KYAKNRNFTSLIVV-TNRREPDALLIIGLPDGPTAHFKLSKLVLWKDINIH 50
>gi|31324545|ref|NP_081608.1| ribosome production factor 1 isoform 1 [Mus musculus]
gi|148680022|gb|EDL11969.1| brix domain containing 5, isoform CRA_b [Mus musculus]
Length = 212
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 62/110 (56%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 101 VPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLC 160
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 111
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P L I
Sbjct: 161 EQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPSILWI 210
>gi|303391621|ref|XP_003074040.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
ATCC 50506]
gi|303303189|gb|ADM12680.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
ATCC 50506]
Length = 273
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI++TT R S++ F S+ LS++ N RG ++I + A K ++T +I++H N
Sbjct: 69 PKIMVTTSRSPSSQLLHF-SKHLSLVLNGENVIRGQLCEEEISDLAHKHEYTCVIIIHEN 127
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P AL + P GPT F + L + +P V +N +G ++
Sbjct: 128 RGRPSALAVSYFPFGPTMRFTIIDHFLTR----RSHPLSPKMYFVCDNMEGPVGIKIKEK 183
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
+ LFP+ +R+V+ N+ D I FRH Y+ E K +KT+
Sbjct: 184 MALLFPRCDG--AKRIVSLVNRNDTIAFRH--YLIE-----------------KGDKTTL 222
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
K + L+ ++ GTF+ GEFEW +KP M++ R R
Sbjct: 223 SKSLG--------MDLRAYEIRKGTFEV-DGEFEWAYKPYMNSRRTR 260
>gi|330038769|ref|XP_003239695.1| ribosome production factor 1 [Cryptomonas paramecium]
gi|327206619|gb|AEA38797.1| ribosome production factor 1 [Cryptomonas paramecium]
Length = 181
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHF 122
E L+V+PNSH++KR L +++ + KK ++++ R+ + + + F
Sbjct: 20 EFLNVVPNSHFFKRKQMGLARVLSFFIKKKIDNVLIFTEKRKNFFQVWHVNISRKAIIKF 79
Query: 123 KLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFH 182
K+ + +K +K PEL+ NF ++G+ LF P+F R+V+ F
Sbjct: 80 KIEHAIFKKKLK-FTRFFACRPELIFYNFEKKIGNLSSLFFCDLFENRPDFTKRQVIFFC 138
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
R+ I FRH+RY+F S G D +LQE GPRF LK++
Sbjct: 139 LSRNRILFRHYRYLF---SSSGKDV--------------------KLQEIGPRFVLKILQ 175
Query: 243 L 243
+
Sbjct: 176 I 176
>gi|238582199|ref|XP_002389857.1| hypothetical protein MPER_10962 [Moniliophthora perniciosa FA553]
gi|215452575|gb|EEB90787.1| hypothetical protein MPER_10962 [Moniliophthora perniciosa FA553]
Length = 175
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S++ F E+ V PNSH RG Y +K++ E + D T +IV+H +
Sbjct: 75 PKIVITTSRDPSSKLLQFAKEVRLVFPNSHRVNRGNYVMKELAEACRANDVTDLIVLHEH 134
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT 140
R PDA+++ P GPT +F L+ + LR DI + + T
Sbjct: 135 RGVPDAMIVSHFPHGPTVYFTLNNVALRHDIATYKDST 172
>gi|259489086|tpe|CBF89065.1| TPA: U3 small nucleolar ribonucleoprotein protein IMP4, putative
(AFU_orthologue; AFUA_1G13070) [Aspergillus nidulans
FGSC A4]
Length = 144
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 28/168 (16%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIKN--HGNPTGHIPELVLNNFATRLGHRVGRLIQSL 166
+ I LP GPTA F L +VLR DI N G + P L+ F T+LG RV ++++ L
Sbjct: 1 MTISHLPHGPTASFSLHNVVLRADIPNAARGTVSESYPHLIFEGFKTKLGKRVVQILKHL 60
Query: 167 FPQSPEFR-GRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
FP + G RVVTF N+ D I RHH ++ KDA+
Sbjct: 61 FPPREAGKVGNRVVTFVNKEDSIEVRHHVFV------------KTGYKDAE--------- 99
Query: 226 ITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPR T++L ++ G+ + G+ EW TSR++ +L
Sbjct: 100 ---LAEVGPRMTMRLFEIRGGSLEKGSSGDVEWALTQYTRTSRKKDYL 144
>gi|221053526|ref|XP_002258137.1| u3 small nucleolar ribonucleoprotein protein. u3 small nucleolar
ribonucleoprotein protein [Plasmodium knowlesi strain H]
gi|193807970|emb|CAQ38674.1| u3 small nucleolar ribonucleoprotein protein,putative. u3 small
nucleolar ribonucleoprotein protein,putative [Plasmodium
knowlesi strain H]
Length = 348
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 20 DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY 79
DD+ F+G + P++LITT R S++ F E +IPNS RG+Y
Sbjct: 70 DDEYFFSGVEN------------PRVLITTSRNPSSQLECFAKEFKLLIPNSEKINRGSY 117
Query: 80 DLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GN 138
+K I+ +A+K + T +I++H + P L+I LP GPT + +R + + G+
Sbjct: 118 FIKDILNFARKNNITDVIIIHEYKGIPRNLIICHLPFGPTLFCTIKDCKMRHEFTDQLGS 177
Query: 139 PTGHIPELVLNNFATRLGHRVGRLIQSLFP 168
+ P L+ +NF T LG R+ + + LFP
Sbjct: 178 VSSCNPHLIFHNFNTDLGKRIMCIFKYLFP 207
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 24/96 (25%)
Query: 172 EFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 231
+F RV+TF N+ D I+FRH Y +ET E KG ++I L E
Sbjct: 273 KFENNRVITFFNKNDVIYFRH--YNWETNE-KG-------------------EII--LNE 308
Query: 232 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
GPRF+ + + D+ ++E+V++P +++ +
Sbjct: 309 VGPRFSFIVYKINKEALDSLNEDYEYVYRPFLNSKK 344
>gi|323307438|gb|EGA60712.1| Imp4p [Saccharomyces cerevisiae FostersO]
Length = 132
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 118 PTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRR 177
P F L +V+R DI N GN + P L+ +NF T LG RV +++ LF P+ R
Sbjct: 3 PXQQFSLHNVVMRHDIINAGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSER 62
Query: 178 VVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFT 237
V+TF N+ DFI R H Y+ T+E + E GPRF
Sbjct: 63 VITFANRGDFISVRQHVYV-RTREG------------------------VEIAEVGPRFE 97
Query: 238 LKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
++L L+ GT + K + EW + + T+ ++ +L
Sbjct: 98 MRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 132
>gi|397625470|gb|EJK67808.1| hypothetical protein THAOC_11107, partial [Thalassiosira oceanica]
Length = 122
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 23/126 (18%)
Query: 144 PELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESK 203
P L+LNNF T+LG RVG +++ LFP P+ RRV+TF N D I FRHH Y
Sbjct: 13 PHLILNNFNTQLGRRVGNILKCLFP-IPKPDTRRVITFANDDDHISFRHHVY-------- 63
Query: 204 GSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEM 263
+ G K D L E GPRF ++L ++ GT D K + E+V +P M
Sbjct: 64 --NKEGHKEDDLT------------LYEVGPRFEMRLYQIKLGTLDMKDADNEYVLRPYM 109
Query: 264 DTSRRR 269
+T+ ++
Sbjct: 110 NTAGQK 115
>gi|396082552|gb|AFN84161.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon romaleae
SJ-2008]
Length = 310
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S++ F S+ LS++ N + RG ++I + A K +T +++VH N
Sbjct: 110 PKVMVTTSRSPSSQLLHF-SKQLSLVLNGENFIRGQLCEEEISDVAHKHGYTCVVIVHEN 168
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
R P +L I P GPT F ++ + P + +N +G +V
Sbjct: 169 RGRPASLAISYFPFGPTMRFT----IIDHFLTRRTFPLSPKVYFICDNMEGPVGIKVKER 224
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
I LFP+ +R+V+ N+ D I FRH Y+ E K +KT
Sbjct: 225 IALLFPKCSG--AKRIVSLVNRNDTIAFRH--YLIE-----------------KGDKTVL 263
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
K + L++ ++ GTF+ GEFEW +KP M++ R R
Sbjct: 264 NKSLG--------MDLRVYEIRKGTFEV-DGEFEWAYKPYMNSRRTR 301
>gi|70953050|ref|XP_745651.1| u3 small nucleolar ribonucleoprotein protein [Plasmodium chabaudi
chabaudi]
gi|56526042|emb|CAH75842.1| u3 small nucleolar ribonucleoprotein protein, putative [Plasmodium
chabaudi chabaudi]
Length = 345
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++LITT R S + F EL +IPNS RG+Y +K II +A+K + T +I++H
Sbjct: 81 PQVLITTSRNPSAQLENFAKELKLLIPNSEKINRGSYFIKDIISFARKNNITDVIIIHEY 140
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 161
+ P L+I LP GPT + +R + + N P L+ +NF + LG R+
Sbjct: 141 KGVPRNLIICHLPFGPTLFCTIKDCKMRHEFLDQINNISTCNPHLIFHNFNSDLGKRIMN 200
Query: 162 LIQSLFP 168
+ + LFP
Sbjct: 201 IFKYLFP 207
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 24/96 (25%)
Query: 172 EFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 231
+F RV+ F+N+ D I+FRH Y +ET E + ++I L E
Sbjct: 271 KFENNRVLAFYNKNDIIYFRH--YNWETNE--------------------KNEII--LNE 306
Query: 232 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
GPRF+ + + D+ ++E+V+ P +++ +
Sbjct: 307 VGPRFSFLVYRINKEALDSLNEDYEYVYHPFINSKK 342
>gi|149026183|gb|EDL82426.1| brix domain containing 5 [Rattus norvegicus]
Length = 216
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TI+N R DET P+D+E+ DEF+S + +PKILITT R
Sbjct: 102 PKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCE 161
Query: 63 ELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 106
+L +VIP+SH Y R LKKII +DFT +IV++ +R+ P
Sbjct: 162 QLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTP 205
>gi|124512408|ref|XP_001349337.1| U3 small nucleolar ribonucleoprotein protein, putative [Plasmodium
falciparum 3D7]
gi|23499106|emb|CAD51186.1| U3 small nucleolar ribonucleoprotein protein, putative [Plasmodium
falciparum 3D7]
Length = 362
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++LITT R S+ F EL +IPNS RG+Y +K I+ +A+K + T +I++H
Sbjct: 81 PRVLITTSRNPSSTLENFAKELKLIIPNSEKINRGSYFIKDILNFARKNNITDVIILHEY 140
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNPTGHIPELVLNNFATRLGHRVGR 161
+ P L+I LP GPT + +R + N + P L+ +NF + LG R+
Sbjct: 141 KGIPRNLIICHLPFGPTLFCTIKDCKMRCEFNEKIDNISLCTPHLIFHNFHSDLGKRIMN 200
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQR 185
+ + LFP +R + HN +
Sbjct: 201 IFKYLFPPVTMRTNKRKMPKHNSQ 224
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 24/96 (25%)
Query: 172 EFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 231
++ RV+ F N+ D I+FRH+ + EK +++ L+E
Sbjct: 287 KYENNRVIVFFNKNDIIYFRHYNW----------------------EKNQTNEIV--LKE 322
Query: 232 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
GPRF+ + + T D+ ++E++++P M++ +
Sbjct: 323 IGPRFSFVVYKINKETLDSLNEDYEYIYRPFMNSRK 358
>gi|82539297|ref|XP_724047.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478559|gb|EAA15612.1| Domain of unknown function, putative [Plasmodium yoelii yoelii]
Length = 344
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P++LITT R S + F EL +IPNS RG+Y +K II +A+K + T +I++H
Sbjct: 81 PQVLITTSRNPSAQLENFAKELKLLIPNSEKINRGSYFIKDIISFARKNNITDVIIIHEY 140
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHRVGR 161
+ P L+I LP GPT + +R + + N P L+ +NF + LG R+
Sbjct: 141 KGIPRNLIICHLPFGPTLFCTIKDCKMRHEFLDQINNISTCNPHLIFHNFNSDLGKRIMN 200
Query: 162 LIQSLFP 168
+ + LFP
Sbjct: 201 IFKYLFP 207
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 24/96 (25%)
Query: 172 EFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 231
+F RV+ F+N+ D I+FRH+ + E + +++ L E
Sbjct: 270 KFENNRVLAFYNKNDIIYFRHYNW----------------------ETNEKNEIV--LNE 305
Query: 232 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
GPRF+ + + D+ ++E+V+ P +++ +
Sbjct: 306 VGPRFSFLVYRINKEALDSLNEDYEYVYHPFINSKK 341
>gi|36938600|gb|AAQ86836.1| unknown protein [Ixodes scapularis]
Length = 184
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%)
Query: 2 TPRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFI 61
PRTIENTREPD+T+ P+D+E+ DE ++ ++ PK+LITT R F
Sbjct: 63 VPRTIENTREPDDTMVDPEDEEVQLDEAMDEMAAYFRKEYTPKLLITTSDNPHRRTIKFC 122
Query: 62 SELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLI 111
EL IP++ + R +KK +E A ++ ++ I +++ +RR P ++
Sbjct: 123 RELKQSIPDAEFRWRNRSRIKKTVEQAVERGYSDIAIINEDRRHPSKFVV 172
>gi|162606136|ref|XP_001713583.1| U3 snoRNP protein IMP4 [Guillardia theta]
gi|13794503|gb|AAK39878.1|AF165818_86 U3 snoRNP protein IMP4 [Guillardia theta]
Length = 207
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 29/225 (12%)
Query: 47 ITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 106
+TT R S +F +L+++ P S RG L +I Y + + +++V++ + P
Sbjct: 6 LTTSRNPSLNLISFTKKLINLFPQSKKINRGRKFLTSLISYCVENEVKNLLVIYELKGNP 65
Query: 107 DALLIIGLPDGPTAHFKLSK---LVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLI 163
+ L+I LP GP+ +FK+S L+ + DI +P L+++N T +G R+ ++I
Sbjct: 66 NCLIISHLPSGPSVYFKISNYNILIFKNDINIF---FSDLPILLISNLNTPIGSRISKII 122
Query: 164 QSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQ 223
+L+P+S +R++++ + I ++Y+F+ K +
Sbjct: 123 TNLYPKSSN-NSKRIISYVGLSNNIV--CNQYLFQKKNYNNENM---------------- 163
Query: 224 KVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
+L+ GPRF L+ + G EW+ + + RR
Sbjct: 164 ----KLKNIGPRFFLRPFKIILGNISEINSNVEWIITTLIQSKRR 204
>gi|238569252|ref|XP_002386612.1| hypothetical protein MPER_15075 [Moniliophthora perniciosa FA553]
gi|215439019|gb|EEB87542.1| hypothetical protein MPER_15075 [Moniliophthora perniciosa FA553]
Length = 118
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 62/142 (43%), Gaps = 59/142 (41%)
Query: 166 LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV 225
+FP PEF+GR+VVT HNQRDF+FFR HRY F + E
Sbjct: 1 MFPALPEFQGRQVVTLHNQRDFLFFRRHRYAFRSTERVA--------------------- 39
Query: 226 ITRLQECGPRFTLKLVSLQHGT--------------FDT--------------------- 250
LQE GPRFTLKL SL+ G FD
Sbjct: 40 ---LQEIGPRFTLKLRSLRKGIPAVQNYGEDPRPLEFDKPDENGEAEETEASDSQKVVPP 96
Query: 251 KGGEFEWVHKPEMDTSRRRFFL 272
K E+ W KPE++T+RR FFL
Sbjct: 97 KQDEYLWKWKPELETTRRTFFL 118
>gi|361125026|gb|EHK97088.1| putative Ribosome production factor 1 [Glarea lozoyensis 74030]
Length = 361
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 101/241 (41%), Gaps = 76/241 (31%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGT------YDLKKIIEYAKKKDFTS 95
APKIL+TT ++ A + L ++ P+S Y +R + + L++I ++A +++TS
Sbjct: 187 APKILLTTSINSTLHHEAEL--LCTLFPHSTYIRRSSHRYGHKFSLREISKFASNRNYTS 244
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRL 155
+I+ L++D K PTG L +
Sbjct: 245 VIL------------------------------LKEDAKT---PTG----LTI------- 260
Query: 156 GHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDA 215
PE +GR+VVT HNQRD+IF R HRY+F K G K
Sbjct: 261 ---------------PELQGRQVVTLHNQRDYIFLRRHRYVFRDKRETEKSVVGPDGKVV 305
Query: 216 KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE----FEWVHKPEMDTSRRRFF 271
+ + + LQE GPRFTLKL + G G E +W K M+ R RF
Sbjct: 306 E----GVEGIRAGLQELGPRFTLKLRRVDKG-IGRAGSEGDDAVQWQWKAHMEKQRTRFN 360
Query: 272 L 272
L
Sbjct: 361 L 361
>gi|183233009|ref|XP_001913789.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169801784|gb|EDS89434.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 297
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 65 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 124
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 134
R EPD ++I P GPTA+F L +V R + K
Sbjct: 125 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETK 156
>gi|449710270|gb|EMD49382.1| Brix domain containing protein [Entamoeba histolytica KU27]
Length = 297
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P + ITT + S++ F+ E+ +IPNS RG +K+++E + D T +I+VH N
Sbjct: 65 PNVFITTSKDPSSKLKEFVKEIKLIIPNSTRINRGNIQIKQLVETCRSHDVTDLIIVHEN 124
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 134
R EPD ++I P GPTA+F L +V R + K
Sbjct: 125 RGEPDGMIISHFPYGPTAYFGLYNVVSRHETK 156
>gi|197127334|gb|ACH43832.1| putative U3 snoRNP protein 4 [Taeniopygia guttata]
Length = 203
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK+++TT R S R F EL ++P + RG +L ++ + T ++V+H
Sbjct: 83 PKVMVTTSRDPSARLRLFAKELCLLLPGARRMNRGRAELGALVAACRAAGVTDLLVLHET 142
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN-HGNPTGHIPELVLNNFATRLGHRVG 160
R PD L + LP GPTAHF LS VLR+++ G P P + G G
Sbjct: 143 RGRPDGLTVSHLPHGPTAHFTLSGAVLRQEVGGLXGGPRWPPPTCCCCAWIPPWGKGSG 201
>gi|356605812|gb|AET24965.1| U3 small nucleolar ribonucleoprotein (snoRNP) component, partial
[Caenorhabditis sp. 13 KK-2011]
Length = 146
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 25/164 (15%)
Query: 76 RGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN 135
RG +++ + +D + +IV R +++ LP GPT F LS +V+R DI
Sbjct: 6 RGHXXXXXLVQACRAQDGSDLIVFTETRGXXGGMIVCXLPFGPTXFFTLSNVVMRHDIPE 65
Query: 136 HGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRY 195
G P L+ ++LG R +++ LFP P+ +R++ F N D+I +RHH Y
Sbjct: 66 CGTMREQYPHLIFXKLDSKLGIRFXTILKXLFP-VPKRDSKRIMRFANTEDYISYRHHVY 124
Query: 196 IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLK 239
+D G+ +E GPRF LK
Sbjct: 125 --------KTDEAGE----------------IEWKEVGPRFELK 144
>gi|76156308|gb|AAX27523.2| SJCHGC08273 protein [Schistosoma japonicum]
Length = 188
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 15 TVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYY 74
V DD+ L+AG + P++++TT R S++ F EL +IPN+
Sbjct: 67 VVTSQDDEYLWAGTED------------PRVVVTTSRSPSSKLKEFAKELRFLIPNATKI 114
Query: 75 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIK 134
RG Y K ++E K T +++V+ +R PD L+I LP GPTA F L + R D++
Sbjct: 115 NRGNYLNKNLLEACLAKQITDVVIVNESRGVPDTLIISHLPFGPTAIFTLYNVRTRHDME 174
Query: 135 NHGNPTG 141
G +G
Sbjct: 175 TMGRGSG 181
>gi|429965577|gb|ELA47574.1| hypothetical protein VCUG_00897 [Vavraia culicis 'floridensis']
Length = 252
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 45 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 104
+ +TT R S+R F ++ LS+I N+ RG+ +K++ E ++F +++V +
Sbjct: 67 VYVTTSRDPSSRLKQF-AKHLSLILNASSVTRGSMTIKELAE----QNFDVLVMVGESHG 121
Query: 105 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 164
+ ++L++ P GPT +F L + L K P L+L NF T +G ++ + +
Sbjct: 122 QANSLILTYFPYGPTFYFSLHNVRLLSRTK----PFSTKALLILENFGTDIGLKLKQNLS 177
Query: 165 SLFPQSPEFRGRRVVTFHNQRDFIFFRHH 193
+FP +G+RVV FHN+ D I FRH+
Sbjct: 178 YMFPSVE--KGKRVVVFHNKDDIIRFRHY 204
>gi|402466223|gb|EJW01756.1| hypothetical protein EDEG_03723 [Edhazardia aedis USNM 41457]
Length = 213
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 36/206 (17%)
Query: 46 LITTCRFNSNRGP-AFISELLSVIPNSHYYKRGTYDLK-KIIEYAKKKDFTSIIVVHTNR 103
L+TT + SN+ +SEL +IPNS R +++ K+IE K F+ I + N
Sbjct: 7 LVTTSKEASNKKTLTLVSELSKIIPNSTVNPRDPHNVVVKVIE-QKGNPFSIQISANKNV 65
Query: 104 REPDALLIIG--------LPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATR 154
IG + F++ + + + N +P+ H+ PELV NNF T
Sbjct: 66 SAEFCTNSIGDIINNSDVEENRSYVEFRIVEYRSMQQLNNKADPSSHLYPELVFNNFTTD 125
Query: 155 LGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKD 214
L ++ I +FP G RV +F + DFI+FR +RY+FE++++
Sbjct: 126 LSSKIFEYISLVFPIVSTNLGNRVASFVAKNDFIYFRLYRYVFESRDN------------ 173
Query: 215 AKSEKTSQQKVITRLQECGPRFTLKL 240
+ Q+ GP TL+L
Sbjct: 174 ------------VQFQDVGPHLTLRL 187
>gi|160330981|ref|XP_001712198.1| Rpf1 [Hemiselmis andersenii]
gi|159765645|gb|ABW97873.1| Rpf1 [Hemiselmis andersenii]
Length = 208
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 23/178 (12%)
Query: 61 ISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTA 120
+ +LL +IP+S +K+ + L+ II Y K +F +I+ V ++ L + L +
Sbjct: 37 VKDLLYLIPHSKLFKKKNFKLQDIISYLKLHNFKNILFVKNEKKGSVFLWQLQLNLKISI 96
Query: 121 HFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVT 180
+K+ + +K+I N+ + + H PE++ NF +G + L++SLF P+F+GR+V +
Sbjct: 97 LYKIVYFLPKKNILNNSSRSFHNPEIIFKNFKGNIGKSLCFLLKSLFSNYPDFKGRQVFS 156
Query: 181 FHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
F + FI FR HRYIF + +KD K LQE GPRFT
Sbjct: 157 FFFFQKFIIFRFHRYIFSS-----------TSKDVK------------LQEIGPRFTF 191
>gi|440493554|gb|ELQ76009.1| U3 small nucleolar ribonucleoprotein (snoRNP) component
[Trachipleistophora hominis]
Length = 252
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 45 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 104
+ +TT R S+R F ++ LS+I N+ RG +K++ E ++F +++V +
Sbjct: 67 VYVTTSRDPSSRLKQF-AKHLSLILNATSVTRGNMTIKELAE----QNFDVLVMVGESHG 121
Query: 105 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 164
+ ++L++ P GPT +F L + L K P L+L NF+T +G ++ +
Sbjct: 122 QANSLILTYFPYGPTFYFSLHNVRLLSRTK----PFSTKALLILENFSTDIGLKLKESLS 177
Query: 165 SLFPQSPEFRGRRVVTFHNQRDFIFFRHH 193
+FP +G+R+V FHN+ D I FRH+
Sbjct: 178 YIFPSVE--KGKRIVVFHNKDDIIRFRHY 204
>gi|67586156|ref|XP_665169.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54655665|gb|EAL34938.1| hypothetical protein Chro.20022, partial [Cryptosporidium hominis]
Length = 171
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 3 PRTIENTREPDET-VCRP-DDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAF 60
PRTIENTRE DET V P +D EL + DEFS + +PK+LITT S F
Sbjct: 90 PRTIENTREIDETFVHDPLNDKELHKEMENDEFSDYFSRKRSPKLLITTNNRASKHMYNF 149
Query: 61 ISELLSVIPNSHYYKRGTYDLK 82
+ E++S+IPN +YKR +++K
Sbjct: 150 LKEIVSIIPNCDFYKRNGFNIK 171
>gi|221219430|gb|ACM08376.1| Ribosome production factor 1 [Salmo salar]
Length = 224
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P+TIEN R DET P+D+E+ DEFS+ + PK+LITT R F +
Sbjct: 107 PKTIENQRVYDETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCN 166
Query: 63 ELLSVIPNSHYYKRGTYDLKKII 85
+L +VIP++H Y R LKK+I
Sbjct: 167 QLATVIPDAHVYYRRGLALKKVI 189
>gi|429961362|gb|ELA40907.1| hypothetical protein VICG_02047 [Vittaforma corneae ATCC 50505]
Length = 211
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 22 DELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDL 81
DE+ G +E + PKI ITT S+ +F S+ +S+I N + RG
Sbjct: 52 DEIIYGTKEEESMHL-----PPKIAITTSHTPSSFLKSF-SKHISLIFNGFHLMRGRMSE 105
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTG 141
K++ EY ++ T +I++H + P ++L+ P+GPT F + + ++ K+ G
Sbjct: 106 KELSEYCITQEVTHLIILHETKGNPSSMLLCKYPNGPTYQFSIFNVKYQRRQKS----IG 161
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
LVL+ + G R+ + FP+ R+V F N+ I FRH
Sbjct: 162 EKAYLVLDGMDSEAGKRLKLNLSLCFPKV--LDASRLVAFINRNGTIAFRH 210
>gi|387594732|gb|EIJ89756.1| hypothetical protein NEQG_00526 [Nematocida parisii ERTm3]
gi|387596420|gb|EIJ94041.1| hypothetical protein NEPG_00706 [Nematocida parisii ERTm1]
Length = 206
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 20/103 (19%)
Query: 140 TGHIPELVLNNFA-TRLGHRVGRLIQSLFP-QSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
+GH+PEL +NNF T R + I+S++ + P+F GR++V+F +R FI R HRYI
Sbjct: 101 SGHMPELSINNFEDTENDMRFIKDIESVYSTEEPDFEGRQLVSFTKKRGFILCRKHRYIV 160
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKL 240
E D+ E+T RL E GPR +LKL
Sbjct: 161 RLPE------------DSTKEET------VRLDEIGPRLSLKL 185
>gi|403223059|dbj|BAM41190.1| RNA processing factor [Theileria orientalis strain Shintoku]
Length = 153
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFIS 62
P TIE+ R PDET+ P+D E+ DEF+ K PK+L+T+ R S + F+
Sbjct: 79 PNTIESLRRPDETLVNPEDAEVKHEEKIDEFAEHFKGHRTPKLLVTSTRRPSEKMRTFMK 138
Query: 63 ELLSVIPNSHYYKRG 77
E+L VI N+ YY G
Sbjct: 139 EILLVINNTVYYAVG 153
>gi|357615303|gb|EHJ69585.1| U3 small nucleolar ribonucleoprotein imp4 [Danaus plexippus]
Length = 115
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKI+ITT R S R F+ EL + PNS RG Y++ ++I + D T IVVH +
Sbjct: 44 PKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQLIHACRANDVTDFIVVHEH 103
Query: 103 RREPDALLII 112
R PD+L+ +
Sbjct: 104 RGIPDSLVTM 113
>gi|330040288|ref|XP_003239838.1| U3 snoRNP protein, IMP4 [Cryptomonas paramecium]
gi|327206763|gb|AEA38940.1| U3 snoRNP protein, IMP4 [Cryptomonas paramecium]
Length = 215
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR 103
KI+ITT + S FI +L + P SH RG LK +I + ++ ++I+V+ +
Sbjct: 13 KIIITTSKNPSRMSLNFIKKLNIIFPCSHRVNRGNLSLKSLIRFCIIQNVANLILVYQIK 72
Query: 104 REPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLI 163
+P ++I LP GPT FKL V+ ++ N + +V+ F + LG + I
Sbjct: 73 NKPSCMVIFHLPSGPTLFFKLFN-VITSAVEKKLNLSHQSTLVVIEGFGSPLG-KCIIFI 130
Query: 164 QSLFPQSPEFRGRRVVTFHNQRDFIFFRHH 193
+ R+++ ++ F+F R +
Sbjct: 131 FISLFSFFKKNFRKIIFLKEKKSFVFLRCY 160
>gi|294936901|ref|XP_002781903.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
gi|239893027|gb|EER13698.1| U3 small nucleolar ribonucleoprotein imp4, putative [Perkinsus
marinus ATCC 50983]
Length = 91
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 18/85 (21%)
Query: 188 IFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGT 247
++ RH+RY+F ++ + +D + + A LQE GPRFTLKL SLQ G
Sbjct: 25 LYLRHYRYVF--RDLENTDKDDRCA----------------LQEIGPRFTLKLRSLQLGL 66
Query: 248 FDTKGGEFEWVHKPEMDTSRRRFFL 272
F + GE+E+V +P+ SR+ F L
Sbjct: 67 FAKRTGEYEYVWRPDSQVSRKVFAL 91
>gi|197725789|gb|ACH73084.1| U3 small nucleolar ribonucleoprotein [Epinephelus coioides]
Length = 92
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 26/112 (23%)
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFP P+ +R++TF NQ D+I FRHH Y + KD K+
Sbjct: 3 ILKYLFP-VPKEDSKRIITFANQEDYISFRHHTY---------------QKKDHKN---- 42
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKG-GEFEWVHKPEMDTSRRRFFL 272
L E GPRF +KL ++ G D + + EW H M T+++R FL
Sbjct: 43 -----IELSEVGPRFEMKLHMIRLGALDAEATADVEWRHSSFMRTAKKRKFL 89
>gi|300706614|ref|XP_002995558.1| hypothetical protein NCER_101508 [Nosema ceranae BRL01]
gi|239604713|gb|EEQ81887.1| hypothetical protein NCER_101508 [Nosema ceranae BRL01]
Length = 266
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PKIL+TT + S++ F S+ +S+I N ++ RG +++ K +TS+I+++ N
Sbjct: 69 PKILVTTSKKPSSKLLEF-SKHMSLIFNGLFFMRGRCTKEELSNIMHKNSYTSLILIYEN 127
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
+ P +L I P G T F + K + G LV + + L G++
Sbjct: 128 KGTPSSLTISNFPFGNTFKFSIHGYNRCKTVN-----LGEHCHLVCDRINSELKDLFGKM 182
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQ 222
+ P++ + RRV++ N D I FRH YI K+ + E Q
Sbjct: 183 L----PKNS--KSRRVLSLSNVNDKIGFRH--YII--------------VKNKRVE-LKQ 219
Query: 223 QKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFF 271
+I LKL ++ GTF+ + GE W++KP +++ + +
Sbjct: 220 DLMI----------DLKLYEIRKGTFEQE-GEIVWIYKPFVNSGKSNIY 257
>gi|402470729|gb|EJW04830.1| hypothetical protein EDEG_00967 [Edhazardia aedis USNM 41457]
Length = 283
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 28/230 (12%)
Query: 46 LITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRRE 105
LITT R S++ F + ++ N+ RG+ +K + Y ++ F +II++ NR
Sbjct: 75 LITTVRDPSDKLKHFARRIAHIL-NTTTVTRGSLTIKDLESYMERSQFNAIIIIAENRGT 133
Query: 106 PDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQS 165
P L + P GP +F L +V+ D K GN V NN + + +
Sbjct: 134 PSKLSLCMYPYGPLMNFSLFNIVM-SDFKIKGNAY-----FVSNNMFLKDETKTEETDED 187
Query: 166 --LFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQ 223
+ ++ E R ++ + IF R +F T + K D N K ++S +++
Sbjct: 188 NKILSKNAEAENRALIAIKD----IFSR----VFSTTQ-KHIDKN----KHSRSVLLARR 234
Query: 224 KVITRLQ----ECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRR 269
+ + + F ++L + GT + GGE EWV+KP M+T+R++
Sbjct: 235 NGLISFRHYHNDMKDAFEMRLYEVVRGTLE--GGEREWVYKPFMNTARKQ 282
>gi|322780868|gb|EFZ10097.1| hypothetical protein SINV_16049 [Solenopsis invicta]
Length = 224
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 2 TPRTIENTREPDET--VCRPDDD---ELFAGNDADEFSSILKQGCAPKILITTCRFNSNR 56
P T+E+ RE DET V DD+ EL + DEF++ +Q PK+LIT + +
Sbjct: 114 VPHTLESLREKDETMIVGSLDDEANKELKVDCEHDEFAAYYRQEYEPKVLITYADNPNRK 173
Query: 57 GPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREP 106
F EL +IPNS R +KKI++ A ++FT +++V+ ++ +P
Sbjct: 174 TRIFGRELTRIIPNSISLYRNRSGVKKIVKSATARNFTDVVIVNEDQCKP 223
>gi|378756391|gb|EHY66415.1| hypothetical protein NERG_00055 [Nematocida sp. 1 ERTm2]
Length = 206
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 135 NHGNPTGHIPELVLNNFA-TRLGHRVGRLIQSLFP-QSPEFRGRRVVTFHNQRDFIFFRH 192
N +GH+PEL + NF T R + I+ + + P+F GR+VV+F +R FI R
Sbjct: 96 NGAVDSGHMPELSITNFDDTENDLRFIKDIEDAYSTEDPDFEGRQVVSFTKKRGFILCRK 155
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
HRYI E D RL E GPR +LKL ++
Sbjct: 156 HRYIIRLPEDSTKDET------------------VRLDEIGPRLSLKLQTV 188
>gi|357615304|gb|EHJ69586.1| putative IMP4, U3 small nucleolar ribonucleoprotein,-like protein
[Danaus plexippus]
Length = 97
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 27/112 (24%)
Query: 162 LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTS 221
+++ LFP P+ +RV+TF N D+I FR H Y KE
Sbjct: 3 ILKYLFP-VPKPDSKRVITFANNDDYICFRQHTYKKSGKE-------------------- 41
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDT-KGGEFEWVHKPEMDTSRRRFFL 272
L E GPRF +KL ++ GT + + EW +P M+TS +R FL
Sbjct: 42 -----IELSEIGPRFQMKLYEIKLGTLEALDAADTEWALRPYMNTSSKRRFL 88
>gi|339244461|ref|XP_003378156.1| ribosome production factor 1 [Trichinella spiralis]
gi|316972954|gb|EFV56599.1| ribosome production factor 1 [Trichinella spiralis]
Length = 110
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 229 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKP-EMDTSRRRF 270
L+E GPRFTL+L +LQ GTF+ K G+FEW+ K EM+TSRR +
Sbjct: 30 LKELGPRFTLRLKALQKGTFNPKFGQFEWILKRHEMETSRRSY 72
>gi|303391627|ref|XP_003074043.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
ATCC 50506]
gi|303303192|gb|ADM12683.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon intestinalis
ATCC 50506]
Length = 182
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
H P+L++NNF T +G +V + +FP P R+VV F Q DFI+FR +RY F K
Sbjct: 85 HPPQLIVNNFTTDIGMQVVEFLAGMFPFHPS--SRQVVNFTVQGDFIYFRLYRYCFGEK 141
>gi|346971238|gb|EGY14690.1| RNA processing factor 1 [Verticillium dahliae VdLs.17]
Length = 416
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 183 NQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVS 242
+ RD++F+R HRY+F K + + + KD + + + LQE GPRFTLKL
Sbjct: 328 DTRDYLFWRRHRYVFRDKRATEKNITTAEGKDLE----GVEGIRVGLQEVGPRFTLKLRR 383
Query: 243 LQHGTFDTKGGE----FEWVHKPEMDTSRRRFFL 272
+ G G E +W K +M+ R+RF L
Sbjct: 384 VDKG-VGRAGSEGEDALQWEWKGKMEKDRKRFNL 416
>gi|401828290|ref|XP_003888437.1| brix domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392999709|gb|AFM99456.1| brix domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 182
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 59 AFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGP 118
+ E L +IP+SH G+ D + I +D +V N + L II
Sbjct: 17 VLLKEFLDIIPDSH---AGSTDEEPEISIKIVEDVGPQWIVFKNSQLQIVLKIIQYKS-- 71
Query: 119 TAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRV 178
++SK + KD H P+L++NNF T +G ++ + S+FP S R+V
Sbjct: 72 RDFLRVSKPI-SKD---------HPPQLIVNNFTTDIGMKIVEFLASMFPFSQ--GSRQV 119
Query: 179 VTFHNQRDFIFFRHHRYIFETK 200
F Q DFI+FR ++Y F K
Sbjct: 120 ANFTVQGDFIYFRLYKYCFGEK 141
>gi|392512946|emb|CAD26104.2| hypothetical protein [Encephalitozoon cuniculi GB-M1]
Length = 182
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
H+P+L++NNF T G ++ + +FP S R+V F Q DFI+FR +RY F K
Sbjct: 85 HLPQLIVNNFTTDTGMKIVEFLAEMFPFSQS--SRQVANFTVQGDFIYFRVYRYCFGEK 141
>gi|19074994|ref|NP_586500.1| hypothetical protein ECU11_1940 [Encephalitozoon cuniculi GB-M1]
gi|449328689|gb|AGE94966.1| hypothetical protein ECU11_1940 [Encephalitozoon cuniculi]
Length = 197
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
H+P+L++NNF T G ++ + +FP S R+V F Q DFI+FR +RY F K
Sbjct: 100 HLPQLIVNNFTTDTGMKIVEFLAEMFPFSQS--SRQVANFTVQGDFIYFRVYRYCFGEK 156
>gi|429961358|gb|ELA40903.1| hypothetical protein VICG_02043 [Vittaforma corneae ATCC 50505]
Length = 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
P I I T + + N +SEL + PNS + G I ++D ++ T
Sbjct: 4 PTIFIETPKDSHNSTRELLSELFMIFPNSKKWADGLEVKDSDIFIKIQEDIGPQFLIFTC 63
Query: 103 RREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRL 162
+ II + + L + IK + +LVL++F T LG RV +
Sbjct: 64 KTSQFVFKII-------EYRSRASLGIDSTIKKENH------QLVLSHFTTELGLRVANI 110
Query: 163 IQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
S FP + E +VV F +DFIFFR +R+ K
Sbjct: 111 FMSAFPVNLE--SNQVVNFAVHKDFIFFRMYRFCINEK 146
>gi|242002872|ref|XP_002436079.1| protein Peter pan, putative [Ixodes scapularis]
gi|215499415|gb|EEC08909.1| protein Peter pan, putative [Ixodes scapularis]
Length = 480
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 65/227 (28%)
Query: 91 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKN------- 135
KD+ S+ +VV T + L I LP GPT F++ VL KD+ +
Sbjct: 72 KDYVSVAGLLHVTHMVVFTKTEQAIYLRIARLPRGPTLTFRVEDYVLAKDVLSSLKKKIT 131
Query: 136 HGNPTGHIPELVLNNFATRLGH--RVGRLIQSLFP-------QSPEFRGRRVVTFHNQRD 186
+G+ P LVLNNF+ H + + Q++FP + R ++ F+ +
Sbjct: 132 YGHQYSSHPLLVLNNFSGEGMHLKLMTSMFQNMFPSINVNTVKLNTIRRCLLLNFNQEDS 191
Query: 187 FIFFRHH----------RYIFETKESKGSDAN------------GKKAKDAKSEKTSQQK 224
I FRH+ R + + +S+ D + G +A+ E TS Q
Sbjct: 192 TIDFRHYTIKVAPCGINRAVKKLVQSRVPDLSRLHDVSEFLEQPGASESEAELEGTSNQV 251
Query: 225 VI----------------TRLQECGPRFTLKLVSLQHGTFDTKGGEF 255
++ R+ E GPR TLKLV ++ G GGE
Sbjct: 252 LLPQRIASRGNALNQQSSVRVVELGPRLTLKLVKVEEGLM---GGEV 295
>gi|432094672|gb|ELK26152.1| Ribosome production factor 1 [Myotis davidii]
Length = 173
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 60 FISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPT 119
+ E + + +SH Y R LK +I +DFT +IV+H + + P L++ LP+G T
Sbjct: 111 LMGEPYNPVNSSHVYYRRGLALKMMIPPCSSRDFTDLIVIHEDCKAPHGLILSHLPNGST 170
Query: 120 AHF 122
AHF
Sbjct: 171 AHF 173
>gi|328767922|gb|EGF77970.1| hypothetical protein BATDEDRAFT_20539 [Batrachochytrium
dendrobatidis JAM81]
Length = 389
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 62/224 (27%)
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI------- 133
+K + A + T +++ ++ L I +P GPT F +S L KD+
Sbjct: 62 IKDFVHVASQLSVTHMLIFSRSKTGEPNLRIGRIPRGPTLSFHISSYSLSKDVVSSQPSS 121
Query: 134 KNHGNPTGHIPELVLNNFATRLGH--RVGRLIQSLFP-----QSPEFRGRRVVTF--HNQ 184
K+ G P +VLNNFA H + ++Q++FP Q RRVV F +++
Sbjct: 122 KSFGVEFSKSPLVVLNNFAGDAKHIKLISTMVQNMFPAIRVQQMKISDARRVVIFNLNSE 181
Query: 185 RDFIFFRHHRYIFET----------------------------------KESKGSDA--- 207
+ FRH++ I +T ES DA
Sbjct: 182 TGRVEFRHYKIIVKTTGISKSVKTLIHTNVPDLKGYKDISDYVIRGAFSTESDVEDATES 241
Query: 208 -----NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
+ + KD S KTSQ+ + +L E GPR L+LV +Q G
Sbjct: 242 TVTLPDNYQPKD--SIKTSQRAI--KLIELGPRMELELVKIQGG 281
>gi|77748191|gb|AAI06690.1| Unknown (protein for IMAGE:4203542), partial [Xenopus laevis]
Length = 328
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 55/206 (26%)
Query: 112 IGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGRL 162
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ H + +
Sbjct: 99 VRLPKGPTLSFKVTQYSLVKDVVSSLKKHRMHEEQFSHPPLLVLNNFGTQGMHVKLMATM 158
Query: 163 IQSLFPQS-------PEFRGRRVVTFHNQRDFIFFRHHRY-IFETKESKG---------- 204
Q++FP R ++ ++++ + FRH+ + SKG
Sbjct: 159 FQNMFPSINVHKVTLNTIRRCILINYNDETQELEFRHYSLKVVPVGMSKGMKKLLQEKFP 218
Query: 205 --------SDANGKKAKDAKSE--------------------KTSQQKVITRLQECGPRF 236
S+ K A ++SE Q+ RL E GPR
Sbjct: 219 NMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAVRLTEIGPRM 278
Query: 237 TLKLVSLQHGTFDTKGGEFEWVHKPE 262
TL+LV ++ G D K ++ K E
Sbjct: 279 TLQLVKIEEGLSDGKVLYHNFIQKTE 304
>gi|396082555|gb|AFN84164.1| U3 small nucleolar ribonucleoprotein [Encephalitozoon romaleae
SJ-2008]
Length = 182
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETK 200
H P+L++NNF T +G ++ + ++FP + R+V F Q DFI+FR ++Y F K
Sbjct: 85 HPPQLIVNNFTTDIGMKIVDFLANMFPFNQS--SRQVANFTVQGDFIYFRLYKYCFGEK 141
>gi|213405889|ref|XP_002173716.1| ribosome biogenesis protein BRX1 [Schizosaccharomyces japonicus
yFS275]
gi|212001763|gb|EEB07423.1| ribosome biogenesis protein Brx1 [Schizosaccharomyces japonicus
yFS275]
Length = 294
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD----LKKIIEYAKKKDFTSIIVV 99
K+LI + R + R +++L++++P H K +D L ++ E A+ + ++
Sbjct: 43 KVLILSSRGVTYRQRHLLNDLVALMP--HCKKDSKFDSKDRLYELNELAELYNCNNVYFF 100
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
R+E L I P+GPT F + L ++ GN G P L + H
Sbjct: 101 EARRKEDLYLHIARAPNGPTVKFHIENLHTMDELNMTGNALKGSRPILSFDKTFDSEPHL 160
Query: 159 VGRLIQSLFPQS---PEFRGR------RVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
RLI+++ Q+ P+ R R++T D I+FRH FE +E N
Sbjct: 161 --RLIKNMLEQTLGVPKNARRSKPFVDRLLTLTVADDKIWFRH----FEIRE------NE 208
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K K+ S L E GPRF + ++++ G+F
Sbjct: 209 DKTKEPVS-----------LIEIGPRFVMTIINILEGSF 236
>gi|440292126|gb|ELP85368.1| hypothetical protein EIN_086400 [Entamoeba invadens IP1]
Length = 357
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 38/169 (22%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--------GHIPELVLNNFATRLGHR-- 158
L I LP GPT FK+ + L+KD++ N T H P L+LN F + G
Sbjct: 106 LRIAKLPRGPTCLFKVEEYSLKKDLQAANNLTLSQTSYVMRHPPLLILNGF-NKGGEEMK 164
Query: 159 -VGRLIQSLFP-------QSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
V ++Q +FP + +FR + ++ + I RH Y+ +T+++ +
Sbjct: 165 TVRTVLQMMFPPIQASVARLHQFRRAMLFSYDEKTGLIDLRH--YLIKTRQAHEKQRKEE 222
Query: 211 KA----------------KDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
+ +D K E ++K + +L E GPR TLKL+S+
Sbjct: 223 EEEEDEDIPEDKVVLPINEDGK-ENIMKKKTLVKLVEIGPRMTLKLLSI 270
>gi|193598817|ref|XP_001948335.1| PREDICTED: protein Peter pan-like [Acyrthosiphon pisum]
Length = 317
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 54/203 (26%)
Query: 114 LPDGPTAHFKLSKLVLRKDI-----KNHGNPT--GHIPELVLNNFATRLGH--RVGRLIQ 164
LP GPT FKL L KD+ K NP H P +V+NNF H + + Q
Sbjct: 106 LPQGPTMTFKLVNYALSKDVVSSLRKQMVNPKLFRHAPLIVMNNFTGEGLHINLMATMFQ 165
Query: 165 SLFP-------QSPEFRGRRVVTFHNQRDFIFFRHH----------RYIFETKESKGSDA 207
++FP + + ++ ++++ I FRH+ + + + +SK D
Sbjct: 166 NMFPTINVTKVNLNDIKRCVLMNYNSETKLIEFRHYAITTVPVGLSKGVKKIVQSKVPDL 225
Query: 208 NG-----------KKAKDAKSEKTSQQKVIT-----------------RLQECGPRFTLK 239
+ + D++ E+T+ V+ RL E GPR TL+
Sbjct: 226 SNYDEIDEFLLKPELLSDSEFEETTSSNVVVPQKLVGRGNIVGTQSSIRLSELGPRLTLQ 285
Query: 240 LVSLQHGTFDTKGGEFEWVHKPE 262
L+ ++ G E++ KP+
Sbjct: 286 LIKVEEGLMTGDVMFHEFIKKPD 308
>gi|126275937|ref|XP_001386924.1| ribosome biogenesis protein BRX1 [Scheffersomyces stipitis CBS
6054]
gi|126212793|gb|EAZ62901.1| RNA-binding protein required for biogenesis of the ribosomal 60S
subunit [Scheffersomyces stipitis CBS 6054]
Length = 288
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R IS+LL+++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGVTYRHRHLISDLLALLP--HARKEPKFDSKKNLYQLNEVAELYNCNNIAFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L + P+GPT F + L ++ GN G P L + H
Sbjct: 85 EARKHQDLYLWLTKPPNGPTVKFHVQNLHTLDELNFTGNCLKGSRPVLSFDKSFLENDHY 144
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
RL++ LF + P R + V+TF + I+ R+++ I ET ++K S++
Sbjct: 145 --RLLKELFTHTFGVPPNARKSKPFVDHVMTFSIVDNKIWIRNYQ-INETLDAKDSESGE 201
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
A++ L E GPRF L L+++ G+F
Sbjct: 202 VNAEE------------LNLVEIGPRFVLTLITILEGSF 228
>gi|407036576|gb|EKE38241.1| brix domain containing protein [Entamoeba nuttalli P19]
Length = 354
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 85 IEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN------ 138
+++A + S +++++N L I LP GPT FK+ + LRKDI+
Sbjct: 82 LKFAAMEMCVSHMLIYSNSASGLHLRIGKLPRGPTCLFKVEEYTLRKDIQKSSGIMYPPN 141
Query: 139 --PTGHIPELVLNNFATRLGHRVGRL---IQSLFP-------QSPEFRGRRVVTFHNQRD 186
P L+LN F + G ++ L +Q LFP + ++R + + + D
Sbjct: 142 SPEMTTSPLLILNGF-NQGGEQLKTLRIVLQQLFPPIQASVAKIKKYRRALLFNYDKETD 200
Query: 187 FIFFRHHRYIFETKESKGSDANGKK------------AKDAKSEKTSQQKVITRLQECGP 234
+ RH Y+ ++SK D G E +QK +L + GP
Sbjct: 201 MVELRH--YVIRVRDSKREDIEGNNEDEEKEEKVVLPVNKMGKENIEKQKSYVKLIDIGP 258
Query: 235 RFTLKLVSL 243
R L L+S+
Sbjct: 259 RLKLHLLSI 267
>gi|167377790|ref|XP_001734543.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903910|gb|EDR29300.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 353
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 85 IEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN------ 138
+++A + S +++++N L I LP GPT FK+ + LRKDI+
Sbjct: 82 LKFAAMEMCVSHMLIYSNSASGLHLRIGKLPRGPTCLFKVEEYTLRKDIQKSSGIMYPPN 141
Query: 139 --PTGHIPELVLNNFATRLGHRVGRL---IQSLFP-------QSPEFRGRRVVTFHNQRD 186
P L+LN F + G ++ L +Q LFP + ++R + + + D
Sbjct: 142 SPEMTTSPLLILNGF-NQGGEQLKTLRIVLQQLFPPIQASVAKIKKYRRALLFNYDKETD 200
Query: 187 FIFFRHHRYIFETKESKGSDANGKK------------AKDAKSEKTSQQKVITRLQECGP 234
+ RH Y+ ++SK D G E +QK +L + GP
Sbjct: 201 MVELRH--YVIRVRDSKREDIEGNNEDEEKEEKVVLPVNKMGKENIEKQKSYVKLIDIGP 258
Query: 235 RFTLKLVSL 243
R L L+S+
Sbjct: 259 RLKLHLLSI 267
>gi|67481679|ref|XP_656189.1| brix domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|56473376|gb|EAL50805.1| brix domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|449702647|gb|EMD43246.1| Brix domain containing protein [Entamoeba histolytica KU27]
Length = 353
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 85 IEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN------ 138
+++A + S +++++N L I LP GPT FK+ + LRKDI+
Sbjct: 82 LKFAAMEMCVSHMLIYSNSASGLHLRIGKLPRGPTCLFKVEEYTLRKDIQKSSGIMYPPN 141
Query: 139 --PTGHIPELVLNNFATRLGHRVGRL---IQSLFP-------QSPEFRGRRVVTFHNQRD 186
P L+LN F + G ++ L +Q LFP + ++R + + + D
Sbjct: 142 SPEMTTSPLLILNGF-NQGGEQLKTLRIVLQQLFPPIQASVAKIKKYRRALLFNYDKETD 200
Query: 187 FIFFRHHRYIFETKESKGSDANGKK------------AKDAKSEKTSQQKVITRLQECGP 234
+ RH Y+ ++SK D G E +QK +L + GP
Sbjct: 201 MVELRH--YVIRVRDSKREDIEGNNEDEEKEEKVVLPVNKMGKENIEKQKSYVKLIDIGP 258
Query: 235 RFTLKLVSL 243
R L L+S+
Sbjct: 259 RLKLHLLSI 267
>gi|389582467|dbj|GAB65205.1| U3 small nucleolar ribonucleoprotein protein [Plasmodium cynomolgi
strain B]
Length = 187
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 24/99 (24%)
Query: 172 EFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQE 231
+F RV+TF N+ D I+FRH+ + E + + ++I L E
Sbjct: 112 KFENNRVITFFNKNDIIYFRHYNW----------------------ETSEKGEII--LNE 147
Query: 232 CGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRF 270
GPRF+ + + T D+ ++E+V++P +++ + +
Sbjct: 148 VGPRFSFIVYKINKETLDSLNEDYEYVYRPFLNSKKAQL 186
>gi|161899295|ref|XP_001712874.1| U3 snoRNP protein IMP4 [Bigelowiella natans]
gi|75756368|gb|ABA27262.1| U3 snoRNP protein IMP4 [Bigelowiella natans]
Length = 219
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 45 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 104
I ITT R+ + + A ++I + + RG+ L KI++Y K + S+IV+H +
Sbjct: 2 IAITTSRYPTQKTKALCKYFKNIINFAELFTRGSTKLSKIVKYCKDHKYKSLIVLHEYKG 61
Query: 105 EPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQ 164
P+ +LI +F++ K+ K I+ ++V NF + R+ L+
Sbjct: 62 NPNGMLIKYFELNIEIYFRMIKMEFIKLIQISKQLKN--VKVVFINFFSENMRRIKILLN 119
Query: 165 SLFPQSPEFRGRRVVTFHNQRDFIFF-RHHRYIFETKES 202
+F + ++ + + I F R+ +Y + + S
Sbjct: 120 EIFDKGTSDNYDGLILMKSYSNIILFRRYFKYYYHKQNS 158
>gi|213405721|ref|XP_002173632.1| brix domain-containing protein c [Schizosaccharomyces japonicus
yFS275]
gi|212001679|gb|EEB07339.1| brix domain-containing protein c [Schizosaccharomyces japonicus
yFS275]
Length = 390
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 100/266 (37%), Gaps = 77/266 (28%)
Query: 75 KRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI- 133
+R + LK I A T ++V+ + P L I P GPT HF++ +L KD+
Sbjct: 64 ERRSNKLKDYITMAGPLGVTHLLVLSRTEKSP-YLRFIRTPHGPTLHFRVVDYMLSKDLR 122
Query: 134 ---KNHGNPTGHI---PELVLNNFATRLGHR------VGRLIQSLFP----QSPEFRGRR 177
KN +PT P LV+N+F T+ + + Q+LFP QS R
Sbjct: 123 RMQKNPKSPTTEYLTPPLLVMNHFNTKSSKEAPHEALMSTMFQNLFPPLSVQSANINSVR 182
Query: 178 VVTFHNQRD--FIFFRHH------------------------------------RYIFET 199
V N+R+ I RH+ ++ +
Sbjct: 183 RVMLLNRREDGLIDVRHYIITMKPVGLSRPVKRLVKAQQNPGNMPDLHSVQDISDFVLKG 242
Query: 200 KESKGSDANGKKAKDAKSE-------------------KTSQQKVITRLQECGPRFTLKL 240
+ + G ++ + +DA E K QQ V +L E GPR TL L
Sbjct: 243 EGASGMASDSEVDEDATVEVDRPALPSSLGDLGDIDALKPRQQAV--KLVEVGPRMTLDL 300
Query: 241 VSLQHGTFDTKGGEFEWVHKPEMDTS 266
V + G D K + V K E +++
Sbjct: 301 VKVTEGVSDGKVLYHKLVQKTEKESA 326
>gi|71030730|ref|XP_765007.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351963|gb|EAN32724.1| hypothetical protein TP02_0441 [Theileria parva]
Length = 401
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 39/142 (27%)
Query: 91 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNP-- 139
+DFTS+ ++V + E L I LP GPT F+++K+ L DI H NP
Sbjct: 75 RDFTSVTDVLGLTHLIVLSQGSESSYLKIANLPSGPTFTFQINKVSLISDISKHYTNPQS 134
Query: 140 ---TGHIPELVLNNFA-----------------------TRLGHRVGRLIQSLFPQSPEF 173
+ + P LVLN F+ TR+ + ++I + + +
Sbjct: 135 FDSSNYSPLLVLNGFSKSSFKGSDEDETKDESSRFDKAMTRVTETLNKMIAPVDLSTTKI 194
Query: 174 RG-RRVVTFHNQRD-FIFFRHH 193
+ +RVV FH Q+D I RH+
Sbjct: 195 QNCKRVVLFHKQKDGTIVLRHY 216
>gi|389640455|ref|XP_003717860.1| ribosome biogenesis protein BRX1 [Magnaporthe oryzae 70-15]
gi|351640413|gb|EHA48276.1| ribosome biogenesis protein BRX1 [Magnaporthe oryzae 70-15]
gi|440469696|gb|ELQ38798.1| ribosome biogenesis protein BRX1 [Magnaporthe oryzae Y34]
gi|440479120|gb|ELQ59906.1| ribosome biogenesis protein BRX1 [Magnaporthe oryzae P131]
Length = 313
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 26 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD----L 81
AG D ++ + ++LI + R + R +++L +++P H K +D L
Sbjct: 12 AGGDKSSEAASAPRKNKQRVLILSSRGVTFRHRHLLNDLAAMLP--HGKKDVKFDSKSKL 69
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-T 140
++ E A+ + +++ + + + +P+GPT F L L ++ GN
Sbjct: 70 YQLNELAELYNCNNVLFFEARKGQDLYVWASKVPNGPTVKFHLQNLHTMDELNFTGNCLK 129
Query: 141 GHIPELVLNNFATRLGHRVGRLIQSLFPQ---SPEFRGRR--------VVTFHNQRDFIF 189
G P L ++ + H R+I+ LF PE G R V+ F I+
Sbjct: 130 GSRPVLSFDSAFDKDPHY--RVIKELFLHIFGVPE--GARKSKPFVDHVMGFSIADGKIW 185
Query: 190 FRHHRYIFETKESKGSDANGKKAKDAK--SEKTSQQKVITRLQECGPRFTLKLVSLQHGT 247
R+++ I E +++KG D +AK K S K + L E GPRF L V +Q G
Sbjct: 186 VRNYQ-INEVEKTKGEDGEDGEAKKEKKSSRKPDAKDTDINLVEIGPRFVLTPVVIQEGA 244
Query: 248 F 248
F
Sbjct: 245 F 245
>gi|170290980|ref|YP_001737796.1| Brix domain-containing protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175060|gb|ACB08113.1| Brix domain protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 178
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 45 ILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR 104
ILITT R S R +F+ +L V+PNS RG L+ + E A K +IVV T R
Sbjct: 2 ILITTTRRPSKRTRSFVRDLYHVLPNSTRRNRGKMSLEDLNELAIKIGADRVIVVGTQRG 61
Query: 105 EPDALLIIGLPDG---PTAHFKLSKLVLRKDIKNHGNP 139
P +L P + LS + LR++I P
Sbjct: 62 NPSSLTFYEPTPSHLKPISIVSLSGVSLRREITKKRAP 99
>gi|355696112|gb|AES00232.1| IMP4, U3 small nucleolar ribonucleoprotein,-like protein [Mustela
putorius furo]
Length = 145
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK++ITT R S+R F EL V P + RG +++ ++ K T ++VVH +
Sbjct: 82 PKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEH 141
Query: 103 RREP 106
R P
Sbjct: 142 RGTP 145
>gi|449518925|ref|XP_004166486.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
[Cucumis sativus]
Length = 168
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 229 LQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
L+E GPRF L+L ++ GT D + EWV +P M T+++R FL
Sbjct: 123 LKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFL 166
>gi|291231531|ref|XP_002735721.1| PREDICTED: peter pan-like [Saccoglossus kowalevskii]
Length = 515
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 24/127 (18%)
Query: 91 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI----KNHGN 138
KDF S+ I+V T L + LP GPT FK++ L KDI K+H
Sbjct: 71 KDFLSVSGLLGVSHIIVFTKTEAGINLKVSRLPRGPTLTFKVNSYCLNKDIVSSLKHHSM 130
Query: 139 PTGHI---PELVLNNFATRLGH--RVGRLIQSLFPQSPEFRG-----RRVV--TFHNQRD 186
+G P LVLNNFA H + + Q++FP R RR V F+ + +
Sbjct: 131 YSGQFKQHPLLVLNNFAREGLHVKLMATMFQNMFPSINVNRVKLNSIRRCVLLNFNPETN 190
Query: 187 FIFFRHH 193
I FRH+
Sbjct: 191 LIDFRHY 197
>gi|389583056|dbj|GAB65792.1| hypothetical protein PCYB_072940 [Plasmodium cynomolgi strain B]
Length = 133
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 191 RHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVIT-------RLQECGPRFTLKLVSL 243
+H +Y+F + G A + K IT L E GP FTL+L+SL
Sbjct: 45 KHPKYMFISTLPNGPTAKYSLTNVLYAHKKKTDIEITTLPPEKCALNEIGPAFTLQLLSL 104
Query: 244 QHGTFDTKGGEFEWVHKPEMDTSRRRFFL 272
+ G + K +E+V +P+M +R++ +L
Sbjct: 105 KDGLINDKEKMYEFVLRPDMKVNRKKMYL 133
>gi|255544047|ref|XP_002513086.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
gi|223548097|gb|EEF49589.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
Length = 180
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 43 PKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTN 102
PK L+TT R S F+ + + I G + + IE + D+T + +VH +
Sbjct: 74 PKTLLTTSRNPSAPIIQFVKDCVRTI------NSGCQVISEFIESCRAHDYTDVFLVHEH 127
Query: 103 RREPDALLIIGLPDGPTAHFK-------LSKLVLRKDIKN 135
PD L+I LP GPTA+F + V R DIK+
Sbjct: 128 HGVPDGLIISHLPFGPTAYFGLLNLLLIVVITVTRHDIKD 167
>gi|430812090|emb|CCJ30489.1| unnamed protein product [Pneumocystis jirovecii]
Length = 664
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 38/258 (14%)
Query: 29 DADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII--- 85
+AD+ S K K+L+ + R + R + +L+ ++P H K +D+K +
Sbjct: 391 EADDLSGFKK--IRQKVLVLSSRGITFRQRHLMKDLVDMLP--HSKKDTKFDMKSKLYHL 446
Query: 86 -EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHI 143
E A+ + +I+ + + + + +P+GPT F + D+ GN G
Sbjct: 447 NEVAELYNCNNIMFFEARKHQDLYIWMTKVPNGPTVKFHVQNAHTMDDLHLTGNCLKGSR 506
Query: 144 PELVLNNFATRLGHRVGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFFRHHR 194
P L + H +L++ LF Q +G R V+TF I+FR+++
Sbjct: 507 PILSFDAGFDMEPHM--KLVKELFSQIMGVPKGSRKSKPFIDHVLTFSYADHKIWFRNYQ 564
Query: 195 YIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGE 254
+ +T GKK S L E GPRF L L+ + G+F GG
Sbjct: 565 IVEKTP--------GKKVSSYSDTDIS-------LVEIGPRFVLTLICVLEGSF---GGP 606
Query: 255 FEWVHKPEMDTSRRRFFL 272
+ +K + S+ R F+
Sbjct: 607 VIYENKEFITPSKMRSFI 624
>gi|162606582|ref|XP_001713321.1| hypothetical protein GTHECHR2185 [Guillardia theta]
gi|12580787|emb|CAC27105.1| hypothetical protein [Guillardia theta]
Length = 186
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 73 YYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKD 132
YYKR + + ++ Y K+K+ ++I + N + I+ + F ++ L++
Sbjct: 33 YYKRNKFKFRHLMIYLKRKNINNMIYLFENNNRY-FVSIVNFQENIHIKFGINNLLITSR 91
Query: 133 IKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRH 192
I PE++ NF + + +++ + Q R ++ ++ + I+FR
Sbjct: 92 IS--SIIYKDYPEIIYLNFKAQHEIYIQKVLTQILYQVSPLTNRELLCIYSNKGIIYFRS 149
Query: 193 HRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL 243
RYIF K +D K +QE GPR K++++
Sbjct: 150 FRYIF-----------SKNLRDVK------------IQEIGPRLNFKILNI 177
>gi|300706960|ref|XP_002995709.1| hypothetical protein NCER_101328 [Nosema ceranae BRL01]
gi|239604908|gb|EEQ82038.1| hypothetical protein NCER_101328 [Nosema ceranae BRL01]
Length = 179
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 145 ELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
+LVLNNF+T +G ++ +FP + R++V F + +F++FR ++Y F
Sbjct: 85 QLVLNNFSTEIGTQLAHCFMDIFP--CDVNSRQIVNFTVKNEFLYFRMYQYCF 135
>gi|322701934|gb|EFY93682.1| brix domain-containing protein 2 [Metarhizium acridum CQMa 102]
Length = 294
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 26 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII 85
A + A++ S K A ++L+ + R + R +++L +++P H + +D KK +
Sbjct: 14 AKSGAEDGSPKAKPKNAQRVLLLSSRGINARHRHLLNDLAALLP--HSRRESKFDSKKNL 71
Query: 86 ----EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT- 140
E A + +++ + +R+ + I P+GP A F + L ++ GN
Sbjct: 72 HDLNELADLYNCNNVLFLEARKRQDLYMHISKAPNGPRARFHVQNLHTMSELNFMGNSLK 131
Query: 141 GHIPELVLNNFATRLGHRVGRLIQSLFPQS----PEFRGR-----RVVTFHNQRDFIFFR 191
G P L + A G RL++ L + P R RV+ F I+ R
Sbjct: 132 GSRPILSFD--AAFNGEPYLRLLRELLTHTFGVPPTARKAKPFIDRVLAFIVADGRIWVR 189
Query: 192 HHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
H++ + E ++ +K EK S L+E GPRF L + +Q G+F
Sbjct: 190 HYQIVEEEDDA------------SKDEKLS-------LREIGPRFCLTPMFIQEGSF--- 227
Query: 252 GGEFEWVHK 260
GG + +K
Sbjct: 228 GGPIIYENK 236
>gi|313227554|emb|CBY22701.1| unnamed protein product [Oikopleura dioica]
Length = 395
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 64/214 (29%)
Query: 91 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH------ 136
KDF +I +V + RE + +I +P GPT F + + VL+KD+++
Sbjct: 70 KDFLTIAGPMNVKHLVTFSKTRETVGMRLITVPKGPTMSFAIDEFVLKKDVESSLQRPIK 129
Query: 137 -----GNPTGHIPELVLNNF--ATRLGHRVGRLIQSLFP-----QSPEFRGRRVVTFHNQ 184
NP P L+++ F T + ++LFP Q RRVV H
Sbjct: 130 DEKVLKNP----PLLIMSQFPNQTDVEKFTYEAFRALFPRIKPSQVAVDTIRRVVLLHYN 185
Query: 185 RDF--IFFRHHRYIFETKESKGSDA-----NGKKAK----------------------DA 215
++ I FRH Y +T+ G NGK D
Sbjct: 186 KETNQIQFRH--YAIKTRTGAGKRVRKLLENGKSVPNLGKYESVEQFLNGMSGSESEFDD 243
Query: 216 KSEKT---SQQKVITRLQECGPRFTLKLVSLQHG 246
SE T S +++ RL E GPR L+LV ++ G
Sbjct: 244 SSEVTNPKSGRQMKVRLTELGPRMNLRLVKIEEG 277
>gi|269860191|ref|XP_002649818.1| exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP)
component, predicted [Enterocytozoon bieneusi H348]
gi|220066759|gb|EED44231.1| exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP)
component, predicted [Enterocytozoon bieneusi H348]
Length = 195
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 40/201 (19%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVV--HT 101
KILI S I +++ + PNS I++ +K DF I++ H
Sbjct: 5 KILIYKPLSFSCESNELIDDIIRIFPNS-----------IIVDSEEKLDFQRCIIIRIHE 53
Query: 102 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT--GHIPELVLNNFATRLGHRV 159
N P A +II + K++ + KN G T +L+L+NF + LG ++
Sbjct: 54 NNGIP-AYIIINTNETQIVF----KIISYRTRKNLGIKTEFSDSSQLILSNFTSDLGLKI 108
Query: 160 GRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEK 219
+ ++FP ++V F ++F+FFR +++ F K D
Sbjct: 109 AEIFMNIFPMDTT--SNQIVNFSVYKEFVFFRMYKFQFSLSTKKVKDTK----------- 155
Query: 220 TSQQKVITRLQECGPRFTLKL 240
T+ Q+ GP+ TL+L
Sbjct: 156 -------TKFQQIGPQLTLRL 169
>gi|428673003|gb|EKX73916.1| conserved hypothetical protein [Babesia equi]
Length = 648
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPN----SHYYKRGTYDLKKIIEYAKKKDFTSIIVV 99
K+L+ R +N G +++L S++P+ S + KR +Y +I E + +S++ +
Sbjct: 34 KVLVFANRGITNLGRQLLNDLKSLLPHHKAESKWEKRVSY--AEINEICEISSCSSVVFI 91
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI-PELVLNNFATRLGHR 158
+ + E L + P GPT +++ + KD GN P L + + L H
Sbjct: 92 ESKKNEM-ILWVAKSPYGPTLKARITNIHTLKDSTFFGNCLARSRPLLTFDKSFSELPHL 150
Query: 159 VGRLIQSLF----------PQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
+LIQ+LF P+S F ++F + I+ RH++ + E++ S N
Sbjct: 151 --KLIQTLFTQVFGTPNNHPKSMPFHDH-CLSFFYLDNHIYMRHYQI---SPENEFSINN 204
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
+ L E GP+F L+++ L +G+F+
Sbjct: 205 PDRQ---------------MLTEIGPQFALEVILLLNGSFN 230
>gi|448114813|ref|XP_004202672.1| Piso0_001521 [Millerozyma farinosa CBS 7064]
gi|359383540|emb|CCE79456.1| Piso0_001521 [Millerozyma farinosa CBS 7064]
Length = 288
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R I++L S++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGVTYRHRHLINDLSSLLP--HARKEPKFDSKKNLFLLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + + ++ GN G P L + H
Sbjct: 85 EARKHQDLYLWISKPPNGPTLKFHIQNMHTLDELNFTGNCLKGSRPILSFDRAFDSSEH- 143
Query: 159 VGRLIQSLFPQSPEFRGRRVVTFH---NQRDFIFFRHHRYIFETKESKGSDANGK--KAK 213
RL++ LF + TF N R F H F ++K N + +
Sbjct: 144 -NRLLKELF----------IHTFGVPPNARKSKPFIDHVMSFSIVDNKVWVRNYQINETA 192
Query: 214 DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
DAKS + + + T L E GPRF L L+++ G+F
Sbjct: 193 DAKSSEQTSETDDTSLVEIGPRFVLTLITILEGSF 227
>gi|354548339|emb|CCE45075.1| hypothetical protein CPAR2_700790 [Candida parapsilosis]
Length = 290
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 30/219 (13%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R IS+LL+++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGITYRHRHLISDLLNLLP--HARKEPKFDTKKQLYQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + L ++ GN G P L + H
Sbjct: 85 ECRKHQDLYLWIAKPPNGPTVKFHVQNLHTLDELNFIGNCLKGSRPVLSFDKSFEVADH- 143
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ +F Q+ P R + V+TF I+ R+++ I ET E+K ++
Sbjct: 144 -FKLLKEMFIQTFGVPPNARKSKPFIDHVMTFAVVDGKIWIRNYQ-INETLETKENEVGD 201
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
+ D+ L E GPR L L+++ G+F
Sbjct: 202 EVDVDS-----------LNLVEIGPRLVLTLITILEGSF 229
>gi|449019558|dbj|BAM82960.1| probable essential nucleolar protein required for biogenesis of the
60S ribosomal subunit; Brx1p [Cyanidioschyzon merolae
strain 10D]
Length = 301
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 29/240 (12%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHY-YKRGTYD-LKKIIEYAKKKDFTSIIVVHT 101
++L+ + R NRG + +L +++P+S K T D L E A+ ++
Sbjct: 3 RVLVMSTRGIGNRGRHLMLDLRTIMPHSKKEQKLDTKDRLDTANEVAELHSCEGCLLFEA 62
Query: 102 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHRVG 160
+R+ L P GPT F++ + ++ GN G P LV +
Sbjct: 63 RKRKDLYLWAARTPRGPTVRFEVQNVHTMGELSLVGNALRGSRPILVFDQSFNENAAIHV 122
Query: 161 RLIQSLFPQ----------SPEFRGRRVVTFHNQRDFIFFRHHRYIFET--KESKGSDA- 207
+LI++L Q S F R + H ++ RH++ E ++SK A
Sbjct: 123 QLIKALLSQIFSVPCGHKKSQPFVDRVLAFMHTPDGRLWVRHYQIQLEALRQQSKRMPAV 182
Query: 208 -------NGKKAKDAKSEKTS---QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
+G++A D + S Q + L E GPRF L + + G+F GG W
Sbjct: 183 RALSQLVSGEQAFDTNTTHLSAEDMQALAETLVEIGPRFVLLPIRIFAGSF---GGRTLW 239
>gi|50426741|ref|XP_461968.1| ribosome biogenesis protein BRX1 [Debaryomyces hansenii CBS767]
gi|49657638|emb|CAG90438.1| DEHA2G09702p [Debaryomyces hansenii CBS767]
Length = 287
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 33/219 (15%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R IS+L++++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGVTYRHRHLISDLVALLP--HARKEPKFDSKKNLYQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + + L I P+GPT F + L ++ GN G P L + H
Sbjct: 85 ESRKHQDLYLWISKPPNGPTLKFHIQNLHTLDELNFTGNCLKGSRPILSFDKSFEVTDHH 144
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ LF + P R + V+TF + I+ R+++ I ET +SK
Sbjct: 145 --KLLKELFTHTFGVPPNARKSKPFVDHVMTFSIVDNKIWIRNYQ-INETVDSKD----- 196
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
A + E+ S L E GPRF L L+++ G+F
Sbjct: 197 --ASELNPEELS-------LVEIGPRFVLTLITILEGSF 226
>gi|388509772|gb|AFK42952.1| unknown [Lotus japonicus]
Length = 326
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 39/227 (17%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD----LKKIIEYAKKKDFTSIIVV 99
++L+ R +R F+ +L ++P H+ K D L I E A+ K+ S I +
Sbjct: 69 RVLVFASRGIRHRDRHFMQDLRDLLP--HHKKDVKLDEKGKLSVINEIAEMKNCNSTIYL 126
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNF--ATRLG 156
+ +++ + + P+GP+ F + + ++K GN G P L + T +
Sbjct: 127 ESRKKQDLYMWLSKTPNGPSVKFLVQNIHTMAEVKLTGNCLKGSRPLLCFDAIFDTTPVY 186
Query: 157 HRVGRLIQSLF------PQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
L+Q LF P+ F V +F + ++FR+++ +++ E K +D
Sbjct: 187 QLFKTLLQQLFGAPKGHPKVKPFIDH-VFSFFIVDNRVWFRNYQVVYDAVEGKTNDP--- 242
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
L E GPRF L V + G+F GG W
Sbjct: 243 -----------------VLVEIGPRFVLNPVRVFSGSF---GGSTLW 269
>gi|356521211|ref|XP_003529250.1| PREDICTED: uncharacterized protein LOC100787283 [Glycine max]
Length = 119
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 4 RTIENTREPDETVCRPDDDELFAGNDADEFSS 35
RTIENTRE DETVC+PDDDE G +A F++
Sbjct: 6 RTIENTREHDETVCKPDDDE-EPGYNASGFAA 36
>gi|399949679|gb|AFP65337.1| hypothetical protein CMESO_148 [Chroomonas mesostigmatica CCMP1168]
Length = 240
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 97 IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI---KNHGNPTGHIPELVLNNFAT 153
+ V + ++ L + +P GP FKL K L+ +I K IP L+LNNF++
Sbjct: 61 VWVFSEKKSYCFLCLSKIPKGPLILFKLLKFSLKNEIVISKKKYKNFKEIPILLLNNFSS 120
Query: 154 RLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFF-----------RHHRY------- 195
L + + +I++ F R+ + F Q++ IFF R +++
Sbjct: 121 ILENEI--IIETTLKDVFFFERRKKLIFQKQKNVIFFDFLRSKKIIECRFYKFWGTILLF 178
Query: 196 --------IFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSL---Q 244
K + + N ++ +KT+ + L+E GPR T KL+ +
Sbjct: 179 PRVLRKKNFLINKNNIRKNYNKERGIPLNKKKTTCLSSLI-LEEVGPRLTFKLLEVLERY 237
Query: 245 HGT 247
H T
Sbjct: 238 HAT 240
>gi|66808753|ref|XP_638099.1| brix domain-containing protein [Dictyostelium discoideum AX4]
gi|74853811|sp|Q54N44.1|PPAN_DICDI RecName: Full=Peter Pan-like protein
gi|60466543|gb|EAL64595.1| brix domain-containing protein [Dictyostelium discoideum AX4]
Length = 426
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 68/223 (30%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDI-KNHGNPTG------HIPELVLNNFATRLGH--RV 159
+ + LP GPT FK+ + ++D+ K PT + P +VLN F H V
Sbjct: 114 MAMARLPKGPTTTFKIQEYSFQRDVAKAKIRPTSFEKSYLNSPLVVLNGFTRGTPHLEMV 173
Query: 160 GRLIQSLFPQSPEF-----RGRRVVTF--HNQRDFIFFRHH-------------RYIFET 199
++QSLFP + +RVV F + + D + FRH+ + I ++
Sbjct: 174 QNMVQSLFPSINVYTLKLSTCKRVVLFNYNKETDNVEFRHYAIKVSNVGVNRSIKRIIQS 233
Query: 200 K---------------------ESKGSDAN-----------GKKAKDAKSEK------TS 221
K ES DAN KAK+ K E+ T+
Sbjct: 234 KIPDISNLGDISDYVMNGLGATESDYEDANDGQVELSSKMINSKAKNIKLERKGLDINTT 293
Query: 222 QQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMD 264
Q++ I +L+E GPR L L+ ++ + + +++ K +++
Sbjct: 294 QKRAI-KLEEIGPRMNLSLLKVEDDLYKGEVLYHQYIKKSDIE 335
>gi|84995112|ref|XP_952278.1| (SSF, Peter Pan) family member protein [Theileria annulata strain
Ankara]
gi|65302439|emb|CAI74546.1| (SSF, Peter Pan) family member protein, putative [Theileria
annulata]
Length = 397
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 47/206 (22%)
Query: 91 KDFTSI--------IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNH-GNP-- 139
+DFTS+ ++V + E L I LP GP+ F+++K+ L DI H NP
Sbjct: 64 RDFTSVTDVLGLTHLIVLSQGSEISYLKIANLPSGPSFTFQINKISLISDIFKHCKNPQS 123
Query: 140 ---TGHIPELVLNNFA-----------------------TRLGHRVGRLIQSLFPQSPEF 173
+ + P LVLN F+ TR+ + ++I + + +
Sbjct: 124 FDSSNYSPLLVLNGFSRGTSKGSDDDGSKDDSSRFDKAMTRVTETLNKMISPVDLSTTKI 183
Query: 174 RG-RRVVTFHNQRD-FIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKV--ITRL 229
+ +RV+ FH Q D I RH Y + D + KD + KT + + +
Sbjct: 184 QNCKRVILFHKQNDGTIVLRH--YSINLVDCNTPD----QVKDLLTRKTMKNLINETSDF 237
Query: 230 QECGPRFTLKLVSLQHGTFDTKGGEF 255
+ + L S ++ +FD+ EF
Sbjct: 238 EHINNYLSSDLTSKKNSSFDSDTDEF 263
>gi|414871041|tpg|DAA49598.1| TPA: hypothetical protein ZEAMMB73_601835 [Zea mays]
Length = 253
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 19/19 (100%)
Query: 3 PRTIENTREPDETVCRPDD 21
PRTIENTREPDETVC+PD+
Sbjct: 67 PRTIENTREPDETVCQPDE 85
>gi|448112247|ref|XP_004202048.1| Piso0_001521 [Millerozyma farinosa CBS 7064]
gi|359465037|emb|CCE88742.1| Piso0_001521 [Millerozyma farinosa CBS 7064]
Length = 288
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R I++L S++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGVTYRHRHLINDLSSLLP--HARKEPKFDSKKNLFLLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + + ++ GN G P L + H
Sbjct: 85 EARKHQDLYLWISKPPNGPTLKFHVQNMHTLDELNFTGNCLKGSRPILSFDRAFDSSEH- 143
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
RL++ LF + P R + V++F + ++ R+++ I ET
Sbjct: 144 -NRLLKELFIHTFGVPPNARKSKPFIDHVMSFSIVDNKVWIRNYQ-INETA--------- 192
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
DA+S + + + T L E GPRF L L+++ G+F
Sbjct: 193 ----DAQSSEQTSESDDTSLVEIGPRFVLTLITILEGSF 227
>gi|448535110|ref|XP_003870910.1| Csi2 66S pre-ribosomal particle component [Candida orthopsilosis Co
90-125]
gi|380355266|emb|CCG24783.1| Csi2 66S pre-ribosomal particle component [Candida orthopsilosis]
Length = 290
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 30/219 (13%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R IS+LL+++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGITYRHRHLISDLLTLLP--HARKEPKFDTKKNLYQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + L ++ GN G P L + H
Sbjct: 85 ECRKHQDLYLWIAKPPNGPTVKFHIQNLHTLDELNFIGNCLKGSRPVLSFDKSFESSDH- 143
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ +F Q+ P R + V TF I+ R+++ I ET E+K ++
Sbjct: 144 -FKLLKEMFIQTFGVPPNARKSKPFIDHVTTFAIVDGKIWIRNYQ-INETLETKENEDGD 201
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
+ D+ L E GPR L L+++ G+F
Sbjct: 202 EVDVDS-----------LNLVEIGPRLVLTLITILEGSF 229
>gi|325652019|ref|NP_001191783.1| suppressor of SWI4 1 homolog b [Xenopus laevis]
gi|55249605|gb|AAH86267.1| Unknown (protein for MGC:81614) [Xenopus laevis]
Length = 600
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 55/196 (28%)
Query: 111 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGR 161
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ H +
Sbjct: 98 FVRLPKGPTLSFKVTQYSLVKDVVSSLKKHRMHEEQFSHPPLLVLNNFGTQGMHVKLMAT 157
Query: 162 LIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHHRY-IFETKESKG--------- 204
+ Q++FP + RR ++ ++++ + FRH+ + SKG
Sbjct: 158 MFQNMFPSINVHKVTLNTIRRCILINYNDETQELEFRHYSLKVVPVGMSKGMKKLLQEKF 217
Query: 205 -------------------SDANGKKAKD----------AKSEKTSQQKVITRLQECGPR 235
S++ ++ D A Q+ RL E GPR
Sbjct: 218 PNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAVRLTEIGPR 277
Query: 236 FTLKLVSLQHGTFDTK 251
TL+LV ++ G D K
Sbjct: 278 MTLQLVKIEEGLSDGK 293
>gi|339257804|ref|XP_003369088.1| brix domain-containing protein 2 [Trichinella spiralis]
gi|316966731|gb|EFV51274.1| brix domain-containing protein 2 [Trichinella spiralis]
Length = 320
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 42/231 (18%)
Query: 31 DEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTY--DLKKIIEYA 88
++ + LK ++L+ R S R +++L +++P+S + +L+ I E
Sbjct: 15 EKLNKTLKWTNRERVLVFCSRGTSFRDRHLMNDLKALMPHSKSESKMDKKDNLRLINEIC 74
Query: 89 KKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELV 147
+ K+ + + + +++ L + P GP+A F + + ++K GN G P L
Sbjct: 75 EMKNCSKCLFFESRKKKDVYLWAVNTPRGPSAKFLVKNVHTMMELKLTGNCLKGSRPLLS 134
Query: 148 LNNFATRLGHRVGRLIQSLF----------PQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
+ R +L++ LF P+S F V+TF D I+ R+++ +
Sbjct: 135 FDKNFDR--SYALKLVKELFIQIFSIPNRHPKSKPFVD-HVLTFSVYDDRIWVRNYQIV- 190
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
D N DA ++E GPR TL+L+ +Q G+F
Sbjct: 191 --------DPNA----DA-------------MEEIGPRMTLQLILIQEGSF 216
>gi|19111899|ref|NP_595107.1| ribosome biogenesis protein brx1 [Schizosaccharomyces pombe 972h-]
gi|30580377|sp|Q9HGL6.1|BRX1_SCHPO RecName: Full=Ribosome biogenesis protein brx1
gi|9716246|emb|CAC01521.1| ribosome biogenesis protein Brx1 (predicted) [Schizosaccharomyces
pombe]
Length = 295
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 37/218 (16%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD----LKKIIEYAKKKDFTSIIVV 99
K+L+ + R + R +++L+S++P H K D L ++ E A+ + +I
Sbjct: 44 KVLVLSSRGVTYRQRHLLNDLVSMMP--HSKKDSKLDSKDRLYQLNELAELYNCNNIFFF 101
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ RRE L I P+GPT F + L ++ GN G P L + H
Sbjct: 102 ESRRREDLYLHIARAPNGPTVKFHVENLHTMDELNMTGNALKGSRPILSFDKTFDTAPHL 161
Query: 159 --VGRLIQSLF--PQSPEFRGR----RVVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
V L+Q F P+ R + RV T I+FR+ +E +E N
Sbjct: 162 KVVKELLQQTFGIPKGAR-RSKPFIDRVCTLTIADGKIWFRN----YEIRE------NED 210
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K+KD + L E GPRF + ++++ G+F
Sbjct: 211 KSKDPVT-----------LIEIGPRFVMTIINILEGSF 237
>gi|260943075|ref|XP_002615836.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851126|gb|EEQ40590.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 287
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 32/219 (14%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R I +LL ++P H K +D KK + E A+ + +I
Sbjct: 27 RVLVISSRGVTYRHRHLIQDLLQLMP--HARKEPKFDSKKNLNQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + + ++ GN G P L + T H
Sbjct: 85 EARKHQDLYLWISKPPNGPTMKFYIQNMHTLDELNFTGNCLKGSRPILSFDKSFTDSAHH 144
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
LI+ +F + P R + V+TF + I+ R+++ I ET ++K S+
Sbjct: 145 --SLIKEMFTHTFGVPPNARKSKPFIDHVMTFSIVDNKIWVRNYQ-IAETVDAKESE--- 198
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
A D + L E GPRF + L+++ G+F
Sbjct: 199 -DAVDTEG---------LSLVEIGPRFVMTLITILEGSF 227
>gi|344302218|gb|EGW32523.1| hypothetical protein SPAPADRAFT_51069 [Spathaspora passalidarum
NRRL Y-27907]
Length = 288
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R IS+L++++P H K +D KK + E A+ + +I
Sbjct: 27 RVLVISSRGITYRHRHLISDLMNLLP--HARKEPKFDSKKNLHQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + L ++ GN G P L + H
Sbjct: 85 ECRKHQDLYLWITKPPNGPTLKFHIQNLHTLNELNFTGNCLKGSRPILSFDKSFLENDH- 143
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ +F + P R + V+TF I+ R+++ I ET + K +++N
Sbjct: 144 -FKLLKEMFTHTFGVPPNARKSKPFIDHVMTFSIVDGKIWIRNYQ-INETVDVKDNESN- 200
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
D E+ S L E GPR L L+++ G+F
Sbjct: 201 ----DINPEELS-------LVEIGPRLVLTLITILEGSF 228
>gi|224134983|ref|XP_002327538.1| predicted protein [Populus trichocarpa]
gi|222836092|gb|EEE74513.1| predicted protein [Populus trichocarpa]
Length = 86
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 3 PRTIENTREPDETVCRPDDDELFAGNDADEFSSIL 37
PRTI+NT+E DETVC+PD++E+ + S +
Sbjct: 41 PRTIKNTKENDETVCKPDNEEVLTHSSCSAIESTI 75
>gi|354475207|ref|XP_003499821.1| PREDICTED: suppressor of SWI4 1 homolog [Cricetulus griseus]
Length = 770
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 57/210 (27%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RV 159
L ++ LP GPT F+++K L +D+ + H H P LVLN+F+ + H +
Sbjct: 39 LKLMRLPGGPTLTFQINKYTLVRDVVSSLRRHRMHEQQFNHPPLLVLNSFSPQGMHIKLM 98
Query: 160 GRLIQSLFPQS-------PEFRGRRVVTFHNQRDFIFFRHHRY-IFETKESKGSD----- 206
+ Q+LFP + ++ ++ + FRH+ + S+G
Sbjct: 99 ATMFQNLFPSINVHTVNLNTIKRCLLINYNPDSQELDFRHYSIKVVPVGASRGMKKLLQE 158
Query: 207 ---------------ANGKKAKDAKSE-------------------KTSQQKVITRLQEC 232
A G ++++E +QQ I RL E
Sbjct: 159 KFPNMSRLQDISELLATGAGLSESEAEPDGEHNITELPQAVAGRGNMQAQQSAI-RLTEI 217
Query: 233 GPRFTLKLVSLQHGTFDTKGGEFEWVHKPE 262
GPR TL+L+ +Q G + +VHK E
Sbjct: 218 GPRMTLQLIKIQEGVGNGNVLFHSFVHKTE 247
>gi|410950436|ref|XP_003981911.1| PREDICTED: uncharacterized protein LOC101093001 [Felis catus]
Length = 745
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 78/207 (37%), Gaps = 55/207 (26%)
Query: 111 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGR 161
++ LP GPT F+++K L +D+ + H H P LVLN+F H +
Sbjct: 102 LMRLPGGPTLTFRINKYTLMRDVVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMAT 161
Query: 162 LIQSLFPQ-------SPEFRGRRVVTFHNQRDFIFFRHHRY-IFETKESKGSD------- 206
+ Q+LFP + ++ ++ + FRH+ + S+G
Sbjct: 162 MFQNLFPSINVHKVNLNTIKRCLLINYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKF 221
Query: 207 -------------ANGKKAKDAKSEKTSQ------------------QKVITRLQECGPR 235
A G ++++E + Q+ RL E GPR
Sbjct: 222 PNMSRLQDISELLATGAGLSESEAEPDGEHNITELPQAVAGRGNMRAQQSAVRLTEIGPR 281
Query: 236 FTLKLVSLQHGTFDTKGGEFEWVHKPE 262
TL+L+ +Q G + +VHK E
Sbjct: 282 MTLQLIKIQEGVGEGNVLFHSFVHKTE 308
>gi|145547673|ref|XP_001459518.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427343|emb|CAK92121.1| unnamed protein product [Paramecium tetraurelia]
Length = 357
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 61/209 (29%)
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI------PELVLN 149
II+ TN+ + I P GPT F++ K R ++ N P LV+N
Sbjct: 86 IIMTQTNKN--SYIRFIQNPRGPTFTFRILKYANRNEVLNAQRKFKSFSRVFSPPLLVMN 143
Query: 150 NFATRLG------------HRVGRLIQSLFPQ------SPEFRGRRVVTFHNQRDFIFFR 191
F T + VG +IQS+FP +P+ + +RV+ F + D I+ R
Sbjct: 144 GFQTDVQTDDPKRPTSDHIKLVGNMIQSMFPAINVQNTNPKTQ-KRVILFSYKNDKIYIR 202
Query: 192 HHRYIFE--------------------TKESKGSD--ANGKKAKDAKSEKT--------- 220
H+ F +K + SD N + + +E++
Sbjct: 203 HYYISFNLKGIDKKMKKIIKANKLPNLSKYNSFSDFLQNNHQMFASDTEQSDLEELEIEN 262
Query: 221 ---SQQKVITRLQECGPRFTLKLVSLQHG 246
+Q++ RL E GPR LKL ++ G
Sbjct: 263 KQHKKQQMSIRLHEVGPRLELKLYKIEEG 291
>gi|241950143|ref|XP_002417794.1| ribosome biogenesis protein BRX1 [Candida dubliniensis CD36]
gi|223641132|emb|CAX45509.1| ribosome biogenesis protein, putative [Candida dubliniensis CD36]
Length = 293
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R I +LLS++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGITYRHRHLIQDLLSLLP--HARKEPKFDSKKNLHQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + L ++ GN G P L + H
Sbjct: 85 ECRKHQDLYLWISKPPNGPTLKFHIQNLHTLDELNFTGNCLKGSRPILSFDKSFLENDHY 144
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ +F Q+ P R + V+TF I+ R+++ I ET + K +D N
Sbjct: 145 --KLLKEMFLQTFGVPPNARKSKPFIDHVMTFSIVDGKIWIRNYQ-INETLDVKENDKNE 201
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
D ++ + L E GPR L L+++ G+F
Sbjct: 202 DGDDDVDVDQLN-------LVEIGPRLVLTLITVLEGSF 233
>gi|145480587|ref|XP_001426316.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393390|emb|CAK58918.1| unnamed protein product [Paramecium tetraurelia]
Length = 357
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 81/209 (38%), Gaps = 61/209 (29%)
Query: 96 IIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHI------PELVLN 149
II+ TN+ + I P GPT F++ K R ++ N P LV+N
Sbjct: 86 IIMTQTNKN--SYIRFIQNPRGPTFTFRILKYANRNEVLNAQRKFKSFSRVFSPPLLVMN 143
Query: 150 NFATRLGHR------------VGRLIQSLFPQ------SPEFRGRRVVTFHNQRDFIFFR 191
F T VG +IQS+FP +P+ + +RV+ F + D I+ R
Sbjct: 144 GFQTDFQSDDPKKPTSDHIKLVGNMIQSMFPAINVQNTNPKTQ-KRVILFSYKNDKIYIR 202
Query: 192 HHRYIFE--------------------TKESKGSD--ANGKKAKDAKSEKT--------- 220
H+ F +K + SD N + + +E++
Sbjct: 203 HYYISFNLKGIDKKMKKIIKANKLPNLSKYNSFSDFLQNNHQMFASDTEQSDLEELEFEN 262
Query: 221 ---SQQKVITRLQECGPRFTLKLVSLQHG 246
+Q++ RL E GPR LKL ++ G
Sbjct: 263 KQHKKQQMSIRLHEVGPRLELKLYKIEEG 291
>gi|68479244|ref|XP_716301.1| likely nucleolar ribosomal biogenesis factor BRX1p [Candida
albicans SC5314]
gi|46437967|gb|EAK97305.1| likely nucleolar ribosomal biogenesis factor BRX1p [Candida
albicans SC5314]
Length = 292
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R I +LL+++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGITYRHRHLIQDLLALLP--HARKEPKFDSKKNLHQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + L ++ GN G P L + H
Sbjct: 85 ECRKHQDLYLWISKPPNGPTLKFHIQNLHTLDELNFTGNCLKGSRPILSFDKSFLENDHY 144
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ +F Q+ P R + V+TF I+ R+++ I ET + K +D
Sbjct: 145 --KLLKEMFLQTFGVPPNARKSKPFIDHVMTFSIVDGKIWIRNYQ-INETLDVKEND--- 198
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K +D + Q ++ E GPR L L+++ G+F
Sbjct: 199 -KIEDDEDYDVDQLNLV----EIGPRLVLTLITVLEGSF 232
>gi|196012806|ref|XP_002116265.1| hypothetical protein TRIADDRAFT_60181 [Trichoplax adhaerens]
gi|190581220|gb|EDV21298.1| hypothetical protein TRIADDRAFT_60181 [Trichoplax adhaerens]
Length = 290
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 44/250 (17%)
Query: 11 EPDETVCRPDDDELFAGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPN 70
+P + V R +D + DE + K +ILI + R + +++L +IP+
Sbjct: 13 DPVKKVKRSKEDH---AEEQDENKIVQKWTNKQRILIFSARGITYGIRHLMNDLRCLIPH 69
Query: 71 SHYYKR--GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLV 128
S + +L+ I E + K+ T + +++ L I +P GP+A F + +
Sbjct: 70 SKSDNKLENRDELRVINEICELKNCTKCLFFQVKKKQDAYLWISNIPHGPSAKFLVENVH 129
Query: 129 LRKDIKNHGNP-TGHIPELVLNNFATRLGHRVGRLIQSLFPQ---SPEFRGR------RV 178
++K GN G P + + + H L+Q LF Q +P+ R V
Sbjct: 130 TMDELKMTGNCLKGSRPIVSFDKGFSTSPHY--SLLQELFTQVFSTPQNHPRSKPFVDHV 187
Query: 179 VTFHNQRDFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTL 238
+F + I+FR+++ + E G+ L E GPRFTL
Sbjct: 188 FSFSLLDERIWFRNYQIV----EEDGT-----------------------LVEIGPRFTL 220
Query: 239 KLVSLQHGTF 248
L+ + G+F
Sbjct: 221 NLIRIFDGSF 230
>gi|68479115|ref|XP_716363.1| likely nucleolar ribosomal biogenesis factor BRX1p [Candida
albicans SC5314]
gi|46438030|gb|EAK97367.1| likely nucleolar ribosomal biogenesis factor BRX1p [Candida
albicans SC5314]
Length = 292
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R I +LL+++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGITYRHRHLIQDLLALLP--HARKEPKFDSKKNLHQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
++ L I P+GPT F + L ++ GN G P L + H
Sbjct: 85 ECRTQQDLYLWISKPPNGPTLKFHIQNLHTLDELNFTGNCLKGSRPILSFDKSFLENDHY 144
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ +F Q+ P R + V+TF I+ R+++ I ET + K +D
Sbjct: 145 --KLLKEMFLQTFGVPPNARKSKPFIDHVMTFSIVDGKIWIRNYQ-INETLDVKEND--- 198
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K +D + Q ++ E GPR L L+++ G+F
Sbjct: 199 -KIEDDEDYDVDQLNLV----EIGPRLVLTLITVLEGSF 232
>gi|449666017|ref|XP_002163125.2| PREDICTED: suppressor of SWI4 1 homolog, partial [Hydra
magnipapillata]
Length = 308
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 92/241 (38%), Gaps = 65/241 (26%)
Query: 81 LKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI------- 133
LK + A + I+ + P + I+ LP GPT F++++ L KDI
Sbjct: 65 LKDFVHIAGPYGISHFIIFSKTEKSP-YMKIVRLPRGPTLTFRINEYSLMKDITSILRRP 123
Query: 134 KNHGNPTGHIPELVLNNFATRLGHR--VGRLIQSLFP-------QSPEFRGRRVVTFHNQ 184
K G P +V+NNFAT + + Q++FP + E R + F +
Sbjct: 124 KTIGQQFKFPPLVVMNNFATEAVEMKLMTTVFQNMFPSIKVQKVKLAEIRRCAMFNFDQE 183
Query: 185 RDFIFFRHHRY-IFETKESKG----------------------------SDANGKKAKDA 215
I FRH+ SKG S++ G++ D+
Sbjct: 184 SGCIDFRHYNIEAIPVGISKGVMKLMKNKIPNLSSLNDISDLVTGAAYLSESEGEEPTDS 243
Query: 216 -----------KSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEF---EWVHKP 261
+ K+ Q V +L E GPR L+L+ ++ G GGE +++ K
Sbjct: 244 HVTLPQRLPGRGNTKSGQSAV--KLTELGPRLKLELLKIEEG---VSGGEVLYHKYIQKS 298
Query: 262 E 262
E
Sbjct: 299 E 299
>gi|28277332|gb|AAH45053.1| Ppan protein, partial [Xenopus laevis]
Length = 655
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 57/194 (29%)
Query: 114 LPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGRLIQ 164
LP GPT FK+++ L KD+ + H H P LVLNNF T+ H + + Q
Sbjct: 107 LPKGPTLSFKVTQYSLVKDVVSSLKKHRMHEEQFTHPPLLVLNNFGTQGMHVKLMATMFQ 166
Query: 165 SLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHHRY-IFETKESKG------------ 204
++FP + RR ++ ++++ + FRH+ + SKG
Sbjct: 167 NMFPSINVHKVTLNTIRRCILINYNDETQELEFRHYSLKVVPVGMSKGMKKLLQEKFPNM 226
Query: 205 ----------------SDANGKKAKD-----------AKSEKTSQQKVITRLQECGPRFT 237
S++ ++ D + +QQ + RL E GPR T
Sbjct: 227 SRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAV-RLTEIGPRMT 285
Query: 238 LKLVSLQHGTFDTK 251
L+LV ++ G D K
Sbjct: 286 LQLVKIEEGLSDGK 299
>gi|50543678|ref|XP_500005.1| YALI0A12155p [Yarrowia lipolytica]
gi|49645870|emb|CAG83934.1| YALI0A12155p [Yarrowia lipolytica CLIB122]
Length = 406
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 28/117 (23%)
Query: 108 ALLIIGLPDGPTAHFKLSKLVLRKDIK--------NHGNPTGHIPELVLNNFATRLGHR- 158
+L + +P GPT HFK+S+ L KD++ N G P LV+NNF+ +
Sbjct: 102 SLRMARVPRGPTLHFKVSQYSLIKDVRKFVRSPKSNDGKLYKQPPLLVMNNFSLKSDDAT 161
Query: 159 ------VGRLIQSLFP-------QSPEFRGRRVVTFHNQRDF--IFFRHHRYIFETK 200
V ++ Q++FP + P RRVV + ++ I FRH Y +T+
Sbjct: 162 NPHETLVTQMFQNMFPPLSAQNTRIPSI--RRVVMLNKDKETGSIEFRH--YAIDTR 214
>gi|71022193|ref|XP_761327.1| hypothetical protein UM05180.1 [Ustilago maydis 521]
gi|46097821|gb|EAK83054.1| hypothetical protein UM05180.1 [Ustilago maydis 521]
Length = 311
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ R ++R I++L S++P H K D K + E A+ + + +
Sbjct: 36 RVLMLPSRGVTSRMRHLINDLESLMP--HAKKDSKLDSKSQLHLLNELAELNNCNNALYF 93
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLGHR 158
+RE + P+GP+A F++ + ++K GN G P L + H
Sbjct: 94 EARKREDLYMWASKTPNGPSAKFQVQNIHTMDELKMTGNCLKGSRPILSFDKEFDEKPHW 153
Query: 159 VGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
L++ +F Q +G R V++F + I+FR+++ I E+ + A
Sbjct: 154 T--LVKEMFTQMFGVPKGARKAKPFVDHVISFSIVDNKIWFRNYQ-IVESDPGATAMAKV 210
Query: 210 KKAKDAKSEKTSQQKVITR---LQECGPRFTLKLVSLQHGTF 248
++A+D K +K K +R L E GPR L + + G+F
Sbjct: 211 EEAQDGK-KKAGGAKDASRQPKLVEIGPRMVLSPIRVFEGSF 251
>gi|322702581|gb|EFY94217.1| brix domain-containing protein 2 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 42 APKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSII 97
A ++L+ + R + R +++L +++P H + +D KK + E A + +++
Sbjct: 30 AQRVLLLSSRGINARHRHLLNDLATLLP--HSRRESKFDSKKKLHDLNELADLYNCNNLL 87
Query: 98 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLG 156
+ +++ + I P+GP A F + L ++ GN G P +L+ A G
Sbjct: 88 FLEARKQQDLYMHISKAPNGPRARFHVQNLHTMSELNFMGNSLKGSRP--ILSFDAAFNG 145
Query: 157 HRVGRLIQSL----FPQSPEFRGR-----RVVTFHNQRDFIFFRHHRYIFETKESKGSDA 207
RL++ L F P R RV+ F I+ RH++ E ++
Sbjct: 146 EPYLRLLRELLTHTFGVPPTARKAKPFIDRVLAFIVADGRIWVRHYQIAEEEDDA----- 200
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSR 267
+K EK S L+E GPRF L + +Q G+F GG + +K + S+
Sbjct: 201 -------SKDEKLS-------LREIGPRFCLTPIYIQEGSF---GGPIIYENKQFVSPSQ 243
Query: 268 RR 269
R
Sbjct: 244 VR 245
>gi|343428836|emb|CBQ72381.1| related to BRX1-Essential nucleolar protein required for biogenesis
of the 60S ribosomal subunit [Sporisorium reilianum
SRZ2]
Length = 312
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ R ++R I++L S++P H K D K + E A+ + + +
Sbjct: 37 RVLMLPSRGVTSRMRHLINDLESIMP--HAKKDSKLDSKSQLHLLNELAELNNCNNALYF 94
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLGHR 158
+RE + P+GP+A F++ + ++K GN G P L + H
Sbjct: 95 EARKREDLYMWASKTPNGPSAKFQVQNIHTMDELKMTGNCLKGSRPILSFDKEFDEKPHW 154
Query: 159 VGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFFRHHRYIFE----TKESKGS 205
L++ +F Q +G R V++F + ++FR+++ + T SK
Sbjct: 155 T--LVKEMFTQMFGVPKGARKSKPFVDHVISFSIVDNKVWFRNYQIVESDPGATALSKVE 212
Query: 206 DANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
+A K K + S+Q +L E GPR L + + G+F
Sbjct: 213 EAQQGKKKAGGDKDASRQ---PKLVEIGPRMVLSPIRIFEGSF 252
>gi|340515773|gb|EGR46025.1| predicted protein [Trichoderma reesei QM6a]
Length = 307
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD----LKKIIEYAKKKDFTSIIVV 99
++LI + R ++R +++L S++P H K +D L ++ E A+ + +++
Sbjct: 29 RVLILSSRGFAHRHRHLLNDLASLLP--HGRKDAKFDSKSRLGELNELAELYNCNNVLFF 86
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNN-FATRLGH 157
+ + + + +P+GPT F L L +++ GN G P L + F T+
Sbjct: 87 EARKGKDLYVWLSKVPNGPTVKFHLQNLHTMEELHFTGNCLKGSRPILSFDAAFETQPHF 146
Query: 158 RVGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFFRHHRYIFETKESKGSDAN 208
RV ++ LF + +G R V+ F I+ R+++ I E +++K
Sbjct: 147 RV---MKELFLHTFGVPQGARKSKPFIDHVMGFSIADGKIWIRNYQ-ISEVEQTKTKGDE 202
Query: 209 GKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
+ ++ A + K+S + L E GPRF L + +Q G+F
Sbjct: 203 EEGSESAAAGKSSNSDI--NLVEIGPRFVLTPLVIQEGSF 240
>gi|148693188|gb|EDL25135.1| peter pan homolog (Drosophila), isoform CRA_a [Mus musculus]
Length = 417
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 79/209 (37%), Gaps = 55/209 (26%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RV 159
L ++ LP GPT F++SK L +D+ + H H P LVLN+F + H +
Sbjct: 44 LKLMRLPGGPTLTFQISKYTLIRDVVSSLRRHRMHEQQFNHPPLLVLNSFGPQGMHIKLM 103
Query: 160 GRLIQSLFP-------QSPEFRGRRVVTFHNQRDFIFFRHHRY-IFETKESKGSD----- 206
+ Q+LFP + ++ ++ + FRH+ + S+G
Sbjct: 104 ATMFQNLFPSINVHTVNLNTIKRCLLINYNPDSQELDFRHYSVKVVPVGASRGMKKLLQE 163
Query: 207 ---------------ANGKKAKDAKSEKTSQ------------------QKVITRLQECG 233
A G D++ E + Q+ RL E G
Sbjct: 164 KFPNMSRLQDISELLATGVGLSDSEVEPDGEHNTTELPQAVAGRGNMQAQQSAVRLTEIG 223
Query: 234 PRFTLKLVSLQHGTFDTKGGEFEWVHKPE 262
PR TL+L+ +Q G + +VHK E
Sbjct: 224 PRMTLQLIKIQEGVGNGNVLFHSFVHKTE 252
>gi|296416998|ref|XP_002838154.1| ribosome biogenesis protein BRX1 [Tuber melanosporum Mel28]
gi|295634064|emb|CAZ82345.1| unnamed protein product [Tuber melanosporum]
Length = 297
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 35/243 (14%)
Query: 30 ADEFSSILKQGCAP------------KILITTCRFNSNRGPAFISELLSVIPNSHYYKRG 77
A + S+ K G P ++LI T R + R +++L++++P H K
Sbjct: 2 ASVYKSVSKSGTKPSSSEGSDKKNKQRVLILTSRGVTYRHRHLLNDLVAMLP--HSRKDA 59
Query: 78 TYDLKKII----EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI 133
D K + E A + +I+ +R+ + + P+GP L L +++
Sbjct: 60 KLDTKSKLYHLNEIADLYNCNNILFFEARKRQDLYVWLSKAPNGPCVKMHLQNLHTMEEL 119
Query: 134 KNHGNPT-GHIPELVLNNF--ATRLGHRVGRLIQSLFPQSPEFRGRR-----VVTFHNQR 185
GN G P L + AT + ++ F R + V++F
Sbjct: 120 NFTGNALKGSRPLLSFDATFDATPAMQLIKEMLHHTFGVPKGARKSKPFTDHVISFTIAD 179
Query: 186 DFIFFRHHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQH 245
I+FR+++ I E + +K D K+K ++E + L E GPRF + + +
Sbjct: 180 GKIWFRNYQ-ISEAEVAKNVDPVAPKSKAVETELS--------LVEIGPRFVMTPIVILE 230
Query: 246 GTF 248
G+F
Sbjct: 231 GSF 233
>gi|325652017|ref|NP_001191782.1| suppressor of SWI4 1 homolog a [Xenopus laevis]
Length = 564
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 57/197 (28%)
Query: 111 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGHRV---G 160
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ G +V
Sbjct: 98 FVRLPKGPTLSFKVTQYSLIKDVVSSLKKHRMHEEQFTHPPLLVLNNFGTQ-GMQVKLMA 156
Query: 161 RLIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHHRY-IFETKESKGSD------ 206
+ Q++FP + RR ++ ++++ + FRH+ + SKG
Sbjct: 157 TMFQNMFPSINVHKVTLNTIRRCILINYNDETQQLEFRHYSLKVVPVGMSKGMKKLLQEK 216
Query: 207 --------------ANGKKAKDAKSEKTSQ------------------QKVITRLQECGP 234
G ++++E+ Q+ RL E GP
Sbjct: 217 FPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAVRLTEIGP 276
Query: 235 RFTLKLVSLQHGTFDTK 251
R TL+LV ++ G D K
Sbjct: 277 RMTLQLVKIEEGLSDGK 293
>gi|28422433|gb|AAH44293.1| LOC398561 protein, partial [Xenopus laevis]
Length = 567
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 57/197 (28%)
Query: 111 IIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGHRV---G 160
+ LP GPT FK+++ L KD+ + H H P LVLNNF T+ G +V
Sbjct: 101 FVRLPKGPTLSFKVTQYSLIKDVVSSLKKHRMHEEQFTHPPLLVLNNFGTQ-GMQVKLMA 159
Query: 161 RLIQSLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHHRY-IFETKESKG-------- 204
+ Q++FP + RR ++ ++++ + FRH+ + SKG
Sbjct: 160 TMFQNMFPSINVHKVTLNTIRRCILINYNDETQQLEFRHYSLKVVPVGMSKGMKKLLQEK 219
Query: 205 --------------------SDANGKKAKD----------AKSEKTSQQKVITRLQECGP 234
S++ ++ D A Q+ RL E GP
Sbjct: 220 FPNMSRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAVRLTEIGP 279
Query: 235 RFTLKLVSLQHGTFDTK 251
R TL+LV ++ G D K
Sbjct: 280 RMTLQLVKIEEGLSDGK 296
>gi|326433234|gb|EGD78804.1| brix domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 461
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 94/236 (39%), Gaps = 54/236 (22%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHY---YKRGTYDLKKIIEYAKKKDFTSIIVVH 100
+ L+ + R S R +S+L +++P+S +R + I E + ++ + +
Sbjct: 225 RTLVFSSRGISFRVRHLLSDLRALLPHSKKEVKMERKDRLGETIPEICEMRNCNNCLYFE 284
Query: 101 TNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN------PTGH------------ 142
++ L + +P GP+ F ++ + +++ GN P H
Sbjct: 285 MRKKRDVYLWVSKMPHGPSIKFYVTNIHTMDELRLTGNCLKGSRPLVHFSKEFDQSPHFR 344
Query: 143 -IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKE 201
+ EL+ +F H P+S F VV+F+ + I+FRH++ +++ K
Sbjct: 345 LMKELLFQSFGVPKDH----------PKSKPFVDH-VVSFYVLDERIWFRHYQVVWKPKG 393
Query: 202 SKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEW 257
G D TRL E GPR L+ + + G+F GG W
Sbjct: 394 KLGRDEE------------------TRLVEIGPRMVLQPIRMFEGSF---GGPTLW 428
>gi|238878375|gb|EEQ42013.1| ribosome biogenesis protein BRX1 [Candida albicans WO-1]
Length = 292
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R I +LL+++P H K +D KK + E A+ + +I
Sbjct: 27 RLLVISSRGITYRHRHLIQDLLALLP--HARKEPKFDSKKNLHQLNEVAELYNCNNIFFF 84
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L I P+GPT F + L ++ GN G P L + H
Sbjct: 85 ECRKHQDLYLWISKPPNGPTLKFHIQNLHTLDELNFTGNCLKGSRPILSFDKSFLENDHY 144
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ +F Q+ P R + V+TF I+ R+++ I ET + K +D
Sbjct: 145 --KLLKEMFLQTFGVPPNARKSKPFIDHVMTFSIVDGKIWIRNYQ-INETLDVKEND--- 198
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K +D + Q ++ E GP+ L L+++ G+F
Sbjct: 199 -KIEDDEDYDVDQLNLV----EIGPKLVLTLITVLEGSF 232
>gi|325197132|ref|NP_001191417.1| suppressor of SWI4 1 homolog [Xenopus (Silurana) tropicalis]
gi|39794499|gb|AAH64262.1| slc34a2-prov protein [Xenopus (Silurana) tropicalis]
Length = 542
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 55/193 (28%)
Query: 114 LPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGRLIQ 164
LP GPT FK+++ L KD+ + H H P LVLNNF + H + + Q
Sbjct: 101 LPKGPTLSFKVNQYSLMKDVVSSLKKHRMHEEQFTHPPLLVLNNFGNQGMHVKLMATMFQ 160
Query: 165 SLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHHRY-IFETKESKGSD---------- 206
++FP + RR ++ + ++ + FRH+ + SKG
Sbjct: 161 NMFPSINVHKVNLNTIRRCILINYDDETQQLDFRHYSLKVVPVGMSKGMKKLLQEKFPNM 220
Query: 207 ----------ANGKKAKDAKSEKTSQ------------------QKVITRLQECGPRFTL 238
G ++++E+ Q+ RL E GPR TL
Sbjct: 221 SRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAVRLTEIGPRMTL 280
Query: 239 KLVSLQHGTFDTK 251
+LV ++ G D K
Sbjct: 281 QLVKIEEGLSDGK 293
>gi|392573448|gb|EIW66588.1| hypothetical protein TREMEDRAFT_74754 [Tremella mesenterica DSM
1558]
Length = 464
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 53/190 (27%)
Query: 56 RGPAFISELLSVIPNSHYYKRG---------TYDLKKIIE-----------YAKKKDFTS 95
+GPA ++E +P+S K G D++KI+E A+ +D+ +
Sbjct: 13 KGPA-VAESEQNVPSSFVIKSGKVTRSISQLVRDVRKIMEPNTATRLRERVNARLRDYLA 71
Query: 96 I--------IVVHTNRREPDA-LLIIGLPDGPTAHFKLSKLVLRKD-----IKNHGNPTG 141
+ ++V T + L I LP GPT F++S+ L KD ++N G P G
Sbjct: 72 VAPSLGVTHLLVFTLTEAANVHLRIARLPQGPTLTFRISRYSLMKDLVNSALRNVGKPPG 131
Query: 142 ----HIPELVLNNF-------ATRLGHRVGRLIQSLFPQS-------PEFRGRRVVTFHN 183
+ P LVLNNF A + L Q LFP P FR ++++
Sbjct: 132 TEYMNPPLLVLNNFQQPAEGPALPQLKLMSTLFQGLFPAIQVEKSALPTFRRVLLISYSP 191
Query: 184 QRDFIFFRHH 193
I RH+
Sbjct: 192 VSHLISLRHY 201
>gi|51513353|gb|AAH80470.1| Unknown (protein for MGC:89755) [Xenopus (Silurana) tropicalis]
Length = 549
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 55/193 (28%)
Query: 114 LPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RVGRLIQ 164
LP GPT FK+++ L KD+ + H H P LVLNNF + H + + Q
Sbjct: 101 LPKGPTLSFKVNQYSLMKDVVSSLKKHRMHEEQFMHPPLLVLNNFGNQGMHVKLMATMFQ 160
Query: 165 SLFPQSPEFRG-----RR--VVTFHNQRDFIFFRHHRY-IFETKESKGSD---------- 206
++FP + RR ++ + ++ + FRH+ + SKG
Sbjct: 161 NMFPSINVHKVNLNTIRRCILINYDDETQQLDFRHYSLKVVPVGMSKGMKKLLQEKFPNM 220
Query: 207 ----------ANGKKAKDAKSEKTSQ------------------QKVITRLQECGPRFTL 238
G ++++E+ Q+ RL E GPR TL
Sbjct: 221 SRWEDISELLVKGANLSESEAEQDGDHNITELPQACAGRGNMKAQQSAVRLTEIGPRMTL 280
Query: 239 KLVSLQHGTFDTK 251
+LV ++ G D K
Sbjct: 281 QLVKIEEGLSDGK 293
>gi|300122855|emb|CBK23862.2| unnamed protein product [Blastocystis hominis]
Length = 300
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 38 KQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK----IIEYAKKKDF 93
KQ C L+ R S R + +L +++P HY D K+ I E A+ K
Sbjct: 34 KQRC----LVLASRGISYRTRHLMKDLEALMP--HYKSEVKLDSKRGLSAITEMAELKSC 87
Query: 94 TSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFA 152
T+ I T + I +PDGP+ F + +++K GN G P LV ++
Sbjct: 88 TTSIFFETRSHTDVYMWISRIPDGPSVRFLAQNIHTTEELKMTGNCLMGSRPLLVFDSAF 147
Query: 153 TRLGHRVGRLIQSLF----------PQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKES 202
+ RLI++LF P+S F +++F I+ R+++
Sbjct: 148 DKSPEL--RLIKALFKQVFAVPRGHPKSKPFVD-HIMSFFFLDGRIWIRNYQI-----SE 199
Query: 203 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
+G D + ++EK +++ +L E GPR L+++ + +F
Sbjct: 200 RGHD-------EHEAEKFAKRGHEPQLTEIGPRLVLEIIRIFDNSF 238
>gi|322707692|gb|EFY99270.1| brix domain-containing protein 2 [Metarhizium anisopliae ARSEF 23]
Length = 311
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD----LKKIIEYAKKKDFTSIIVV 99
++LI + R + R ++++ S++P H K +D L ++ E A+ + +++
Sbjct: 29 RVLILSSRGVTYRHRHLLNDIASMLP--HGRKDVKFDSKSKLNELNELAELYNCNNVLFF 86
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLGHR 158
+ + + + +P+GP L L +++ GN G P L + H
Sbjct: 87 EARKGKDLYMWLSKIPNGPAIKLHLQNLHTMEELHFTGNCLKGSRPILSFDAAFDSQAHL 146
Query: 159 VGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFFRHHRYIFETKES---KGSD 206
R+I+ LF + +G R V+ F I+ R+++ I E + S G D
Sbjct: 147 --RVIKELFLHTFGVPQGARKSKPFVDHVMGFSFADGKIWVRNYQ-ISEEEASVVLSGDD 203
Query: 207 ANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
GKK K + + ++ +L E GPRF L + +Q G+F
Sbjct: 204 DKGKKPKGGATSRAGNTEI--KLIEIGPRFVLTPIVIQEGSF 243
>gi|313239115|emb|CBY14092.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 39/221 (17%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK------IIEYAKKKDFTSII 97
+ LI R R F+ +L +++P++ + L+K I E A+ K+ + ++
Sbjct: 48 RCLIFGSRGLDYRTRHFMQDLRNIMPHT----KADVKLEKKNDRAIIKEIAEMKNCSKVL 103
Query: 98 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLG 156
+++ + + + +GPT F + L ++K GN G P LV +
Sbjct: 104 YFEGRKKKDLYITMADIDEGPTIRFNVEGLNTMGELKFSGNCLKGSRPLLVFDEHFDEEP 163
Query: 157 HRVGRLIQSLFPQ---SPEFRGR------RVVTFHNQRDFIFFRHHRYIFETKESKGSDA 207
H LI+ +F Q +P + + V+ F D I+ R+++ I E G++
Sbjct: 164 HYA--LIKEMFTQMFGTPRYHPKSQPFVDHVLNFSILDDRIWIRNYQIILE-----GTN- 215
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K KD K E + E GPR L L +Q G F
Sbjct: 216 ---KVKDEKFEPET--------VEIGPRLVLNLQRIQEGPF 245
>gi|313240911|emb|CBY33196.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 39/221 (17%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK------IIEYAKKKDFTSII 97
+ LI R R F+ +L +++P++ + L+K I E A+ K+ + ++
Sbjct: 48 RCLIFGSRGLDYRTRHFMQDLRNIMPHT----KADVKLEKKNDRAIIKEIAEMKNCSKVL 103
Query: 98 VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLG 156
+++ + + + +GPT F + L ++K GN G P LV +
Sbjct: 104 YFEGRKKKDLYITMADIDEGPTIRFNVEGLNTMGELKFSGNCLKGSRPLLVFDEHFDEEP 163
Query: 157 HRVGRLIQSLFPQ---SPEFRGR------RVVTFHNQRDFIFFRHHRYIFETKESKGSDA 207
H LI+ +F Q +P + + V+ F D I+ R+++ I E G++
Sbjct: 164 HYA--LIKEMFTQIFGTPRYHPKSQPFVDHVLNFSILDDRIWIRNYQIILE-----GTN- 215
Query: 208 NGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K KD K E + E GPR L L +Q G F
Sbjct: 216 ---KVKDEKFEPET--------VEIGPRLVLNLQRIQEGPF 245
>gi|303272361|ref|XP_003055542.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463516|gb|EEH60794.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 260
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 87/231 (37%), Gaps = 59/231 (25%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK----IIEYAKKKDFTSIIVV 99
K +I + R ++R + + +++IPNS K D K ++E A K +S +
Sbjct: 3 KCVILSSRGVTSRYRHLMLDTMTLIPNSK--KDSKLDSKNPKDAVVEVADMKSCSSAMFF 60
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN------PT------------- 140
+R + + P+GP+ F + + ++K GN P
Sbjct: 61 ECRKRTDCYMWLAKCPEGPSVKFHVENVHTMAELKLTGNHLKFSRPVLHFDATFDDAEKP 120
Query: 141 --GHIPELVLNNFATRLGHRVGR-LIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIF 197
GHI E++ + FAT H + I +F F+ + D ++FR+++ +
Sbjct: 121 HLGHIKEMLTHVFATPFRHHKQKPFIDHIF------------AFYYEDDRVWFRNYQIVH 168
Query: 198 ETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
E K A G L E GPR L + + G F
Sbjct: 169 P--EGKEVRATG-----------------VTLSETGPRLCLHPIKIFGGAF 200
>gi|322696756|gb|EFY88544.1| ribosome biogenesis protein Ssf2, putative [Metarhizium acridum
CQMa 102]
Length = 458
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 32/118 (27%)
Query: 115 PDGPTAHFKLSKLVLRKDIKN-HGNPTGH------IPELVLNNFAT-----------RLG 156
P GPT HF++ K L KD++ +P G P LV+NNFAT L
Sbjct: 107 PRGPTMHFRVEKYSLCKDVQRVQKHPRGGGKEFLTPPLLVMNNFATPGADAKSKVPKHLE 166
Query: 157 HRVGRLIQSLFP-----QSPEFRGRRVVTFHNQRD-------FIFFRHHRYIFETKES 202
+ QSLFP Q+P RRV+ + ++ + FRH Y TK +
Sbjct: 167 SLATTVFQSLFPPINPQQTPLKTIRRVLLLNREKSEEEDGTFIVNFRH--YAITTKST 222
>gi|401882557|gb|EJT46811.1| rRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 430
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 40/190 (21%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIKNHG---------NPTGHI---PELVLNNFATRLG 156
L + LP GPT F++ + L KDI N +P G P LVLN F
Sbjct: 94 LRVARLPQGPTLTFRVLRYSLMKDIVNAAHVMRNLGGKSPGGEYRNPPLLVLNGFQQPAD 153
Query: 157 HR-------VGRLIQSLFP-------QSPEFRGRRVVTFHNQR--DFIFFRHHRYIFETK 200
+ + + Q LFP P FR ++++++ D H +
Sbjct: 154 GQPMPQLKLMSTMFQGLFPPIQVEKSALPTFRRVLLISYNHSTGPDLHAPLHDHASTDGY 213
Query: 201 ESKGSDANGKKAKD-----------AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFD 249
+S + D + K ++K + RL E GPR LKLV + G
Sbjct: 214 DSMSESEASEAESDTNAVELPEDYVGRGNKKGERKAV-RLVETGPRLELKLVKIVEGLVG 272
Query: 250 TKGGEFEWVH 259
+K GE + V+
Sbjct: 273 SKRGEGQTVY 282
>gi|302412234|ref|XP_003003950.1| ribosome biogenesis protein SSF1 [Verticillium albo-atrum VaMs.102]
gi|261357855|gb|EEY20283.1| ribosome biogenesis protein SSF1 [Verticillium albo-atrum VaMs.102]
Length = 462
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 31/115 (26%)
Query: 110 LIIGL-PDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFAT-------- 153
L IGL P GPT HF++ K L KD+ K GN P LV+NNF+
Sbjct: 101 LRIGLTPRGPTMHFRVEKYSLCKDVQRAQRHPKGFGNDAVTPPLLVMNNFSAPNATSKSA 160
Query: 154 ---RLGHRVGRLIQSLF----PQSPEFRG-RRVVTFHNQRD------FIF-FRHH 193
L + QSLF PQS + RRV+ + + D FI FRH+
Sbjct: 161 VPKHLESLATTVFQSLFPPINPQSTSLKTIRRVLLLNREIDPENEGCFILNFRHY 215
>gi|307108181|gb|EFN56422.1| hypothetical protein CHLNCDRAFT_51897 [Chlorella variabilis]
Length = 197
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 224 KVITRLQECGPRFTLKLVSLQHGTFDTKGGEFEWVHKPEMDTSRR 268
K IT L+ECGPRF LKL ++ GT D E E+V + ++++R
Sbjct: 142 KSIT-LKECGPRFELKLYQIKLGTLDQPHAENEFVLRSYTNSAKR 185
>gi|333907564|ref|YP_004481150.1| carboxyl-terminal protease [Marinomonas posidonica IVIA-Po-181]
gi|333477570|gb|AEF54231.1| carboxyl-terminal protease [Marinomonas posidonica IVIA-Po-181]
Length = 682
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-----REPDALLII 112
P F S+ ++ YK T D KK+IE +++D +++I+ N +E +AL +
Sbjct: 363 PTFYSDFAAIQAGEKDYKSSTRDTKKLIEELRQEDISALILDLRNNGGGSLQEANALAGL 422
Query: 113 GLPDGPTAHFK 123
+P GPT +
Sbjct: 423 FIPSGPTVQIR 433
>gi|152996897|ref|YP_001341732.1| carboxyl-terminal protease [Marinomonas sp. MWYL1]
gi|150837821|gb|ABR71797.1| carboxyl-terminal protease [Marinomonas sp. MWYL1]
Length = 698
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 58 PAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR-----REPDALLII 112
P F S+ ++ YK T D K++IE +K+D +++I+ N +E +AL +
Sbjct: 379 PTFYSDFAAIQAGDKNYKSSTRDTKELIEELRKEDISALILDLRNNGGGSLQEANALAGL 438
Query: 113 GLPDGPTAHFK 123
+P GPT +
Sbjct: 439 FIPSGPTVQIR 449
>gi|424513197|emb|CCO66781.1| ribosome biogenesis protein BRX1 homolog [Bathycoccus prasinos]
Length = 364
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 40/229 (17%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKR--GTYDLKKIIEYAKKKDFTSIIVVHT 101
K L+ T R R + +LL ++PN+ + D + ++E A+ + + I +
Sbjct: 93 KTLVLTSRGVVARFRHLMQDLLCLLPNAKKDAKIDSKNDKRAVVECAELRGCNNAIFFES 152
Query: 102 NRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGN------PTGH------------- 142
+R+ P+GP+ F + + ++K GN P+ H
Sbjct: 153 RKRQDSYAWFAKTPEGPSIKFHVENIHTMAELKLTGNHLKFSRPSLHFDPKFDDEMHTRV 212
Query: 143 IPELVLNNFATRLGHRVGRLIQSLFPQSPEFRGRRVVTFHNQRDFIFFRHHRYIFETKES 202
I E++++ FAT H ++ + ++F+ + ++FR+++ + E
Sbjct: 213 IKEILVHCFATPWKHHA---MKPFYDHQ--------MSFYWEDGRVWFRNYQIVH--PEG 259
Query: 203 KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
K AN ++ S L E GPRF L + + G F K
Sbjct: 260 KEVRANFSSIENGVSSGG------LSLTEVGPRFCLHPIKIFQGAFTGK 302
>gi|225437949|ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 homolog [Vitis
vinifera]
gi|297744237|emb|CBI37207.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 29/218 (13%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKK-----IIEYAKKKDFTSIIV 98
K+L+T R S R + ++S++P H K + K+ + E + K+ +S +
Sbjct: 56 KVLVTCSRRISYRYRHLMLSIVSLLP--HAKKDNKVESKESKGATLNELVELKNCSSCLF 113
Query: 99 VHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLGH 157
+++ L + P+GP+ F + + +++K GN G P L + + H
Sbjct: 114 FECRKQKDLYLWMAKCPNGPSVKFMVDAVHTMEELKLTGNHLKGSRPLLTFSTNFDKDPH 173
Query: 158 R--VGRLIQSLFPQSPEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANGK 210
+ +I +F E R + V F D I+FR+++ ES D G
Sbjct: 174 WKLLKEMITQIFGTPKEHRKAKPYHDHVFAFSLADDHIWFRNYQISVPHNESDKVDRGG- 232
Query: 211 KAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
K+ L E GPRF L + + G+F
Sbjct: 233 -----------LDKIT--LVEVGPRFCLNPIKIFGGSF 257
>gi|47220037|emb|CAG12185.1| unnamed protein product [Tetraodon nigroviridis]
Length = 502
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 39/144 (27%)
Query: 63 ELLSVIPNSHYYKRGT---------YDLKKIIE--------YAKK---KDFTSI------ 96
E + +P+S + RG D++K++E KK KDF ++
Sbjct: 21 EAYASVPHSFVFHRGQVGKNVGQLILDVRKVMEPFTAEALKVRKKNVLKDFVAVAGPLGV 80
Query: 97 --IVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELV 147
++ + + + LP GP HF++ K L KD+ + H H P LV
Sbjct: 81 THFIIFSKTASSVNMRVARLPKGPMLHFRVLKYCLIKDVVSSLKKHRMHDQQFTHHPLLV 140
Query: 148 LNNFATRLGHRV---GRLIQSLFP 168
LNNF + G +V + Q +FP
Sbjct: 141 LNNFGSE-GMQVKLMATMFQHMFP 163
>gi|388579141|gb|EIM19469.1| Brix-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 444
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 115 PDGPTAHFKLSKLVLRKDIKNHGNPTGHI-------PELVLNNFA--TRLGHRVGRLIQS 165
P GPT HF++ + L D++N G++ P LVLN F +R +L QS
Sbjct: 108 PKGPTLHFRVERYSLMADLRNASKKIGNLANTHKVPPLLVLNGFPQDSRPHKLAAQLFQS 167
Query: 166 LFP 168
LFP
Sbjct: 168 LFP 170
>gi|449301374|gb|EMC97385.1| hypothetical protein BAUCODRAFT_450430 [Baudoinia compniacensis
UAMH 10762]
Length = 315
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 23/223 (10%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ T R ++R +++L S++P H K D KK + E A + +I+
Sbjct: 31 RVLMLTSRGVTHRNRHLLADLYSLLP--HSRKDAKLDSKKNLAELNELADLHNCNNILFF 88
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLGHR 158
+ + L + P+GPT F + +++ GN G P L + + H
Sbjct: 89 EARKAKDLYLWLSKPPNGPTVKFHCQNVHTMEELNFTGNCLKGSRPILSFDASFDKQAHL 148
Query: 159 VGRLIQSLFPQS---PEFRGR------RVVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
R+++ L + P+ + V F + I+ R+++ I ET+++KG
Sbjct: 149 --RVVKELLTHTFGVPQASRKVKPFVDHVTGFTIAGNKIWIRNYQ-IAETEQAKGKKPGD 205
Query: 210 KKAKD----AKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
++ ++ + K + L E GPRF L + + G+F
Sbjct: 206 QENQEPPAAVSAPKEGKGDTTVSLVEIGPRFVLTPIVVLEGSF 248
>gi|50309489|ref|XP_454753.1| ribosome biogenesis protein BRX1 [Kluyveromyces lactis NRRL Y-1140]
gi|49643888|emb|CAG99840.1| KLLA0E17799p [Kluyveromyces lactis]
Length = 298
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 32/235 (13%)
Query: 26 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKR--GTYDLKK 83
A +D++E + KQ + L+ T R + R + +L S++P+S + DL +
Sbjct: 23 ANSDSNEKQFMNKQ----RTLLITSRGVTYRHRHLVQDLNSLLPHSRKEPKLDTKKDLGQ 78
Query: 84 IIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GH 142
+ E A+ + +II + + L + P+GPT F L L ++ GN G
Sbjct: 79 LNEIAELYNCNNIIFFEARKHQDLYLWLSKPPNGPTIKFYLQNLHTMDELNFTGNCLKGS 138
Query: 143 IPELVLNNFATRLGHRVGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHH 193
P L + H RLI+ LF + P+ R + +++F + I+ R +
Sbjct: 139 RPILSFDGRFDSEPHY--RLIKELFIHNFGVPPQARKSKPFIDHIMSFSIVDEKIWVRTY 196
Query: 194 RYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
E + N + +D + ++TS L E GPRF + + + G+F
Sbjct: 197 EISHEAR-------NNVEYEDKEEDETS-------LVEIGPRFVMTPILILEGSF 237
>gi|358396185|gb|EHK45566.1| hypothetical protein TRIATDRAFT_152715 [Trichoderma atroviride IMI
206040]
Length = 308
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 26 AGNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD----L 81
+ N+ E SS + ++LI + R + R ++++ S++P H K +D L
Sbjct: 11 SSNEKPESSSNGVKKNKQRVLILSSRGVTYRHRHLLNDIASLLP--HSRKDAKFDSKSRL 68
Query: 82 KKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT- 140
++ E A+ + +++ + + + + +P+GPT F L L +++ GN
Sbjct: 69 GELNELAELYNCNNVLFFEARKGKDLYVWLSKVPNGPTVKFHLQNLHTMEELHFTGNCLK 128
Query: 141 GHIPELVLNN-FATRLGHRVGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFF 190
G P L + F T+ RV I+ LF + +G R V+ F I+
Sbjct: 129 GSRPILSFDAAFETQPHFRV---IKELFLHTFGVPQGARKSKPFVDHVMGFTIADGKIWI 185
Query: 191 RHHRYIFETKES----KGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
R+++ I E ++S G D ++A +S+ T L E GPRF L + +Q G
Sbjct: 186 RNYQ-ISEVEQSMVKGDGEDYVSEQAATGRSKNTD-----INLVEIGPRFVLTPLVIQEG 239
Query: 247 TF 248
+F
Sbjct: 240 SF 241
>gi|344233230|gb|EGV65103.1| hypothetical protein CANTEDRAFT_113501 [Candida tenuis ATCC 10573]
gi|344233231|gb|EGV65104.1| Brix-domain-containing protein [Candida tenuis ATCC 10573]
Length = 290
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII----EYAKKKDFTSIIVV 99
++L+ + R + R I +LL ++P H K +D KK + E A+ + +I
Sbjct: 29 RLLVISSRGITYRHRHLIQDLLQLLP--HARKEPKFDSKKNLYQLNEVAELYNCNNIFFF 86
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + L + P+GPT F + L ++ GN G P L + + LG
Sbjct: 87 EARKHQDLYLWVSKPPNGPTLKFHVQNLHTLDELNFTGNCLKGSRPILSFDK-SFELGDH 145
Query: 159 VGRLIQSLFPQS----PEFRGRR-----VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
+L++ LF + P R + V+TF + ++ R+ + I ET E+K +D
Sbjct: 146 F-KLMKELFIHNFGVPPNSRKSKPFVDHVITFSIVDNKVWIRNFQ-ISETLETKETD--- 200
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
+D + S L E GPR L L+++ G+F
Sbjct: 201 ---EDINVDDLS-------LIEIGPRLVLTLITILEGSF 229
>gi|342321662|gb|EGU13594.1| Ribosomal large subunit assembly and maintenance-related protein,
putative [Rhodotorula glutinis ATCC 204091]
Length = 319
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 22/249 (8%)
Query: 18 RPDDDELFAG-NDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKR 76
R DDD + DAD+ KQ ++L+T+ R S R +++LL+++P++ +
Sbjct: 15 RADDDSTSSTRTDADKPQQPYKQ----RVLVTSSRGISQRQRHLMTDLLALLPHAKKETK 70
Query: 77 --GTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIG-LPDGPTAHFKLSKLVLRKDI 133
++L I E + + R+ D L P+GP+ F + L ++
Sbjct: 71 LEDKHNLPAINELCYLSSCNNALFFEARRQHNDLYLWAAKAPNGPSVRFHVLNLHTMDEM 130
Query: 134 KNHGNP-TGHIPELVLNNFATRLGHR--VGRLIQSLFPQSPEFRGRR-----VVTFHNQR 185
K GN G P +V + H + ++ +F R + V+ F
Sbjct: 131 KMTGNCLKGSRPVVVFDKQFDEEPHWKLIKEVLTHIFAVPKTARRAKPFIDHVINFSIAD 190
Query: 186 DFIFFRHHRYIFETKESKGSDANGKKAK-----DAKSEKTSQQKVITRLQECGPRFTLKL 240
I+FR+++ I +T + + AK Q L E GPRF L
Sbjct: 191 GKIWFRNYQ-ILDTPSTDALSSTTSSTSALTDIQAKKLAKKQGAPHLSLSEVGPRFVLNP 249
Query: 241 VSLQHGTFD 249
V + G+F+
Sbjct: 250 VKIFEGSFN 258
>gi|340722445|ref|XP_003399616.1| PREDICTED: protein Peter pan-like [Bombus terrestris]
Length = 417
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 14/71 (19%)
Query: 192 HHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
+H + +T S+G+ AN K A RL E GPR TL+L+ ++ G D +
Sbjct: 246 NHVTLPQTLSSRGNHANNKSA--------------IRLFELGPRLTLELIKVEDGLLDGE 291
Query: 252 GGEFEWVHKPE 262
E++HK E
Sbjct: 292 VLFHEYIHKSE 302
>gi|156063962|ref|XP_001597903.1| ribosome biogenesis protein BRX1 [Sclerotinia sclerotiorum 1980
UF-70]
gi|154697433|gb|EDN97171.1| hypothetical protein SS1G_02099 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 309
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLK----KIIEYAKKKDFTSIIVV 99
++LI + R + R +++L S++P H K D K ++ E A+ + ++
Sbjct: 28 RVLILSSRGITYRHRHLLNDLASLLP--HGRKDAKLDTKSKLYQLNELAELYNCNNVFFF 85
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TGHIPELVLNNFATRLGHR 158
+ + L + P+GPT + L +++ GN G P L + + H
Sbjct: 86 EARKGKDLYLWMSKAPNGPTVKMHMQNLHTMEELHFTGNCLKGSRPILSFDASFDKEPHL 145
Query: 159 VGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
R+++ LF +G R V+ F I+ R+++ I ET+ S+ A
Sbjct: 146 --RVLKELFLHIFGVPKGARKSKPFVDHVMGFTLADGKIWIRNYQ-ISETEPSRVKGAEE 202
Query: 210 KKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTF 248
+ +KS+ + ++ L E GPRF L + +Q G+F
Sbjct: 203 ETPTKSKSKNSGNKETECSLVEIGPRFVLTPIVIQEGSF 241
>gi|350416588|ref|XP_003491005.1| PREDICTED: suppressor of SWI4 1 homolog [Bombus impatiens]
Length = 417
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 14/71 (19%)
Query: 192 HHRYIFETKESKGSDANGKKAKDAKSEKTSQQKVITRLQECGPRFTLKLVSLQHGTFDTK 251
+H + +T S+G+ AN K A RL E GPR TL+L+ ++ G D +
Sbjct: 246 NHVTLPQTLSSRGNHANNKSA--------------IRLFELGPRLTLELIKVEDGLLDGE 291
Query: 252 GGEFEWVHKPE 262
E++HK E
Sbjct: 292 VLFHEYIHKSE 302
>gi|443893848|dbj|GAC71304.1| RNA-binding protein required for biogenesis of the ribosomal 60S
subunit [Pseudozyma antarctica T-34]
Length = 313
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 28/242 (11%)
Query: 27 GNDADEFSSILKQGCAPKILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKII- 85
G+D D ++ + ++L+ R ++R I++L S++P H K +D K +
Sbjct: 20 GHDDDGATAAPIRRNKQRVLMLPSRGVTSRMRHLINDLESLMP--HTKKDSKFDSKSQLH 77
Query: 86 ---EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNP-TG 141
E A+ + + + +RE + P+GP+A F++ + ++K GN G
Sbjct: 78 MLNELAELNNCNNALYFEARKREDLYMWASKTPNGPSAKFQVQNIHTMDELKMTGNCLKG 137
Query: 142 HIPELVLNNFATRLGHRVGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFFRH 192
P L + H LI+ +F Q RG R V++F + ++FR+
Sbjct: 138 SRPILSFDKEFDEKPHWT--LIKEMFTQMFGVPRGARKSKPFVDHVISFSILDNKVWFRN 195
Query: 193 HRYIFETKESKGSDANGKKAK------DAKSEKTSQQKVITRLQECGPRFTLKLVSLQHG 246
++ I E+ + A ++A+ ++T++Q +L E GPR L + + G
Sbjct: 196 YQ-IVESDPGATAIAQVEEAQKGDGKKGGSKKETNKQ---PKLVEIGPRMVLSPIRVFEG 251
Query: 247 TF 248
+F
Sbjct: 252 SF 253
>gi|85544486|pdb|2CXH|A Chain A, Crystal Structure Of Probable Ribosomal Biogenesis Protein
From Aeropyrum Pernix K1
Length = 217
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR 103
+IL+TT R S R +F+ +L + IP + + RG Y +++ A + I+VV R
Sbjct: 35 RILVTTSRRPSPRIRSFVKDLSATIPGAFRFTRGHYSXEELAREAIIRGADRIVVVGERR 94
Query: 104 REPDALLIIGLPDGP 118
P + + + +GP
Sbjct: 95 GNPGIIRVYAV-EGP 108
>gi|302901687|ref|XP_003048489.1| ribosome biogenesis protein BRX1 [Nectria haematococca mpVI
77-13-4]
gi|256729422|gb|EEU42776.1| hypothetical protein NECHADRAFT_47804 [Nectria haematococca mpVI
77-13-4]
Length = 311
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYD----LKKIIEYAKKKDFTSIIVV 99
++LI + R + R ++++ S++P H K +D L ++ E A+ + +++
Sbjct: 29 RVLILSSRGVTFRHRHLLNDIASMLP--HSRKDAKFDSKTKLYELNELAEMYNCNNVMFF 86
Query: 100 HTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPT-GHIPELVLNNFATRLGHR 158
+ + + + +P+GPT F L L +++ GN G P L + + H
Sbjct: 87 EARKGKDLYVWLSKVPNGPTIKFHLQNLHTMEELHFTGNCLKGSRPVLSFDGAFDKQPHL 146
Query: 159 VGRLIQSLFPQSPEF-RGRR--------VVTFHNQRDFIFFRHHRYIFETKESKGSDANG 209
R+I+ LF + +G R V+ F I+ R+++ I E + S +
Sbjct: 147 --RVIKELFLHTFGVPQGARKSKPFIDHVMGFSFVDGKIWVRNYQ-INEVEASLTKEGEE 203
Query: 210 KKAKDAKSEKTSQQK-VITRLQECGPRFTLKLVSLQHGTF 248
+ + AKS+ S K L E GPRF L + +Q G+F
Sbjct: 204 EDEEAAKSKSRSGNKDTDINLVEIGPRFVLTPIVIQEGSF 243
>gi|427416565|ref|ZP_18906748.1| ABC exporter ATP-binding subunit, DevA family [Leptolyngbya sp. PCC
7375]
gi|425759278|gb|EKV00131.1| ABC exporter ATP-binding subunit, DevA family [Leptolyngbya sp. PCC
7375]
Length = 451
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 22/144 (15%)
Query: 86 EYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFK---------LSKLVLRKDIKNH 136
+ AK++ T I+V H NR A II L DG + K L+ +L DI
Sbjct: 190 QLAKQQGCTIILVTHDNRILDIADRIISLEDGHLSISKGEFLLGLSNLTSFILETDINAI 249
Query: 137 GNPTGHIPELVLNNFATRLGHRVGRLIQSL-FPQSPEFRGRRVVTFH------------N 183
N + ++F +L H + +++ S+ + F + +TF
Sbjct: 250 NNLISPLSASQFSDFLNKLNHELEQVVSSMNLLRDRSFNSKLQITFQAISLKIAQLLQAE 309
Query: 184 QRDFIFFRHHRYIFETKESKGSDA 207
Q F H R I +K ++G D
Sbjct: 310 QVTFFVVDHIRKILWSKNARGKDG 333
>gi|357442331|ref|XP_003591443.1| hypothetical protein MTR_1g087510 [Medicago truncatula]
gi|355480491|gb|AES61694.1| hypothetical protein MTR_1g087510 [Medicago truncatula]
Length = 172
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 19/21 (90%)
Query: 4 RTIENTREPDETVCRPDDDEL 24
+ +ENTRE DET+C+PDD+E+
Sbjct: 40 KNLENTREVDETICKPDDEEV 60
>gi|156937587|ref|YP_001435383.1| ribosomal biogenesis protein, containing Brix domain [Ignicoccus
hospitalis KIN4/I]
gi|156566571|gb|ABU81976.1| ribosomal biogenesis protein, containing Brix domain [Ignicoccus
hospitalis KIN4/I]
Length = 180
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 44 KILITTCRFNSNRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNR 103
K+LITT S R F+ +L+SV+P S RG ++ + A + +I+V
Sbjct: 2 KVLITTAYSPSPRTRTFVKDLVSVLPGSSKLSRGKISMELLGAIAADEGADKVIIVKEYH 61
Query: 104 REPDALLIIGLPDG---PTAHFKLSKLVLRKD 132
P +L + + D P KL + L +
Sbjct: 62 GNPSSLEVYDVVDAELVPRGTIKLKGVTLSSE 93
>gi|405123032|gb|AFR97797.1| rRNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 486
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 29/110 (26%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDIKNHG------NPTGHI---PELVLNNFAT------ 153
L + P GPT F++ K L KD+ N G +PTG P LVLN F
Sbjct: 94 LRVARFPQGPTMTFRVQKYSLMKDLFNSGLRNVGRSPTGEYRNPPLLVLNGFQQPQNGPA 153
Query: 154 ----RLGHRVGRLIQSLFP-------QSPEFRGRRVVTFHNQRDFIFFRH 192
RL + + Q LFP P FR ++++ + I FRH
Sbjct: 154 LPQLRL---MSTMFQGLFPPIQVEKSALPTFRRVLLISYSHVTGCISFRH 200
>gi|255683374|ref|NP_663585.2| suppressor of SWI4 1 homolog [Mus musculus]
gi|341942071|sp|Q91YU8.2|SSF1_MOUSE RecName: Full=Suppressor of SWI4 1 homolog; Short=Ssf-1; AltName:
Full=Peter Pan homolog
gi|26332985|dbj|BAC30210.1| unnamed protein product [Mus musculus]
gi|148693190|gb|EDL25137.1| peter pan homolog (Drosophila), isoform CRA_c [Mus musculus]
Length = 470
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RV 159
L ++ LP GPT F++SK L +D+ + H H P LVLN+F + H +
Sbjct: 97 LKLMRLPGGPTLTFQISKYTLIRDVVSSLRRHRMHEQQFNHPPLLVLNSFGPQGMHIKLM 156
Query: 160 GRLIQSLFP 168
+ Q+LFP
Sbjct: 157 ATMFQNLFP 165
>gi|15928413|gb|AAH14688.1| Peter pan homolog (Drosophila) [Mus musculus]
Length = 470
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 109 LLIIGLPDGPTAHFKLSKLVLRKDI-------KNHGNPTGHIPELVLNNFATRLGH--RV 159
L ++ LP GPT F++SK L +D+ + H H P LVLN+F + H +
Sbjct: 97 LKLMRLPGGPTLTFQISKYTLIRDVVSSLRRHRMHEQQFNHPPLLVLNSFGPQGMHIKLM 156
Query: 160 GRLIQSLFP 168
+ Q+LFP
Sbjct: 157 ATMFQNLFP 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,478,376,325
Number of Sequences: 23463169
Number of extensions: 182912116
Number of successful extensions: 396044
Number of sequences better than 100.0: 982
Number of HSP's better than 100.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 393152
Number of HSP's gapped (non-prelim): 1101
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)