Query 024089
Match_columns 272
No_of_seqs 135 out of 163
Neff 4.4
Searched_HMMs 46136
Date Fri Mar 29 08:52:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024089.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024089hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00994 3a0901s05TIC20 chlor 100.0 3.4E-88 7.4E-93 616.1 24.1 265 1-272 1-267 (267)
2 COG4818 Predicted membrane pro 99.7 5.4E-17 1.2E-21 130.4 8.3 83 179-270 19-101 (105)
3 PF09685 Tic20: Tic20-like pro 98.7 2.7E-07 5.8E-12 72.5 11.8 80 183-263 27-107 (109)
4 PLN02638 cellulose synthase A 53.5 1.3E+02 0.0028 34.0 10.9 24 238-261 1018-1041(1079)
5 PLN02248 cellulose synthase-li 37.5 3.8E+02 0.0082 30.7 11.5 26 236-261 1075-1100(1135)
6 PF11833 DUF3353: Protein of u 36.6 1.7E+02 0.0038 26.3 7.5 42 174-218 123-164 (194)
7 COG2962 RarD Predicted permeas 34.1 2.3E+02 0.005 27.5 8.3 78 127-213 103-189 (293)
8 KOG1278 Endosomal membrane pro 31.2 1.5E+02 0.0032 31.5 6.8 91 166-257 428-545 (628)
9 PLN02400 cellulose synthase 25.2 7.6E+02 0.016 28.3 11.3 24 238-261 1023-1046(1085)
10 PF11947 DUF3464: Protein of u 23.0 2.5E+02 0.0054 24.7 5.8 29 166-194 69-98 (153)
11 COG3296 Uncharacterized protei 22.8 4E+02 0.0088 23.3 7.0 23 238-260 115-137 (143)
12 PF05767 Pox_A14: Poxvirus vir 21.2 1.3E+02 0.0029 24.5 3.5 28 110-137 32-59 (92)
13 COG1459 PulF Type II secretory 20.5 4.2E+02 0.0091 26.4 7.6 13 255-267 248-260 (397)
14 PRK10862 SoxR reducing system 20.4 2.3E+02 0.0049 24.4 5.1 14 125-138 77-90 (154)
15 PLN02195 cellulose synthase A 20.3 1.3E+03 0.028 26.2 12.6 24 238-261 914-937 (977)
No 1
>TIGR00994 3a0901s05TIC20 chloroplast protein import component, Tic20 family. Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the Tic20 protein.
Probab=100.00 E-value=3.4e-88 Score=616.07 Aligned_cols=265 Identities=58% Similarity=1.050 Sum_probs=258.0
Q ss_pred CcccCccccCCCccC--CCCCCCCccccccccccCCCCCccccccccccCCCCCCcCcCCCCCCCcccccccccCccccC
Q 024089 1 MILNGYTTLSGCVPT--NSNKCNVQQNRSVFASILGPPTHSAGLSTRSSWGTHHWVGSWSSGGFPVLHLSAASTPLLSGE 78 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~~~~~~s~~~~~~~ 78 (272)
||+||||+++|++++ +.++||+++++.+++ .|+|+|++++|.|||++.+.| +||++++.+||+||++++||
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 73 (267)
T TIGR00994 1 MIGNGATTTNGGSLTFLAHSPISKKFVNPRVF----FPNKDASSKIRLSASSISRRC---PREIAPLSASASSDFALAGT 73 (267)
T ss_pred CcccCceeCCCCeeeccCcccccCCCCCccee----cCchHHHHHhhhccccccccC---CCCCCccccccccchhhccC
Confidence 999999999998888 999999998888776 999999999999999999888 89999999999999999999
Q ss_pred CCCccccCCCCCCCcCCCCCCCcccCCCCCccCCCCCCCCChHHHHHHHHHHHhhhhhhHHhHHHhhhhcChhHHHHhhh
Q 024089 79 QGSLAHTIPSLPMSRRSHLSPRASKDVPYSFRFPPMTKKPRWWWRSLACIPYLMPLHETWMYAETAYHLHPFLEDFEYLT 158 (272)
Q Consensus 79 ~~~~~~~~p~~~~~~~~~~~~RA~k~~~~~~~~p~n~~kP~~~~R~lA~LpYLLPL~d~l~fG~~l~~~fP~l~~l~~~~ 158 (272)
||++++++|.+|||||+.++|||+||++++|+||+|++||+||||++||+||+|||+|+|+||+++|+|||+++.+..++
T Consensus 74 ~~~~~~~~p~~~~~~~~~~~pra~~~~~~~~~~p~~~~kp~~w~RilA~LpYLLPL~dal~fg~~lf~qfP~L~~l~~pl 153 (267)
T TIGR00994 74 SNGLPPTAPGLPTHRRSIEPPRAAKDDFSKFRFPPMTEKPRWWWRTLACVPYLIPLHISWMYADTAYHLHPFLEKFDAIT 153 (267)
T ss_pred CCCCcccCCcchhccCCCCCcchhcccccccCCCccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhccchHHHHHHHHHHHHHHHcCCCCCceehhHHHHHHHHHHHHHHHHHHHhhchhhhhhhhHHHHHHHHHHHH
Q 024089 159 YPFLEAIGKLPVWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVVGTASTWLPYGIYWGKLGMHFWTAVAFG 238 (272)
Q Consensus 159 ~Pll~~~~slP~~~~liiFf~LyL~VVRN~~is~FVRFNaMQAILLdI~L~l~~li~~~lP~~~g~g~lg~~~~~~vfl~ 238 (272)
+|++.+++++|+|+.+++||++|++||||+++|||+|||+||||||||++++++++++++|..++||.+++++|.+++++
T Consensus 154 ~Pl~~i~~~lPf~~~lv~Ff~Lyl~VVRN~~iphFIRFNtMQAILLDI~L~l~g~v~~~lp~~~~~g~~~~~ifl~vl~~ 233 (267)
T TIGR00994 154 YPFLGAIGRLPTWFLMAYFLLAYMWVVRRKEWPHFFRFHMMMGMLLEIALQVIGCVSRWFPLIHYWGKFGMYYWTAIGFT 233 (267)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHhcCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH
Confidence 99999999999877799999999999999999999999999999999999999999999999988889999999999999
Q ss_pred HHHHHHHHHHHhhcCcccCcchhhHHHhhccCCC
Q 024089 239 FLFTVLECIRCALRGMYADLPFFCDAACIQIPYE 272 (272)
Q Consensus 239 ~l~~vi~ci~~Al~G~ya~IP~ISeAA~~Qv~~~ 272 (272)
++|+++||++||+.|+|||||+||||||+|++||
T Consensus 234 ~ifsviqcircAL~G~YaeIP~ISdAAymQi~~~ 267 (267)
T TIGR00994 234 YLFTLLECIRCALAGMYADVPFMCDAAYIQIPFN 267 (267)
T ss_pred HHHHHHHHHHHHhCCCcCCCchHHHHHHhhccCC
Confidence 9999999999999999999999999999999998
No 2
>COG4818 Predicted membrane protein [Function unknown]
Probab=99.70 E-value=5.4e-17 Score=130.36 Aligned_cols=83 Identities=28% Similarity=0.380 Sum_probs=72.1
Q ss_pred HHHHHHHcCCCCCceehhHHHHHHHHHHHHHHHHHHHhhchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCc
Q 024089 179 VAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVVGTASTWLPYGIYWGKLGMHFWTAVAFGFLFTVLECIRCALRGMYADL 258 (272)
Q Consensus 179 ~LyL~VVRN~~is~FVRFNaMQAILLdI~L~l~~li~~~lP~~~g~g~lg~~~~~~vfl~~l~~vi~ci~~Al~G~ya~I 258 (272)
++|++.+|+ |+||||||||+.++...+.++.++..++|.+ || +.+.+.+ ++.+..|+.||.+|++|+..|+
T Consensus 19 llFlllEre---~~FVrFHAmQS~ltF~~l~~l~ill~~iP~I-g~--lls~~v~---l~a~iLwlv~mykAyrGe~fKl 89 (105)
T COG4818 19 LLFLLLERE---SKFVRFHAMQSFLTFLGLWLLIILLAFIPYI-GW--LLSGLVG---LAAFILWLVCMYKAYRGERFKL 89 (105)
T ss_pred HHHHHhhcc---CcceeehhHHHHHHHHHHHHHHHHHHHhhhh-HH--HHHhHHH---HHHHHHHHHHHHHHHcCCeecC
Confidence 356778998 8999999999999999999999999999986 44 4444444 4677899999999999999999
Q ss_pred chhhHHHhhccC
Q 024089 259 PFFCDAACIQIP 270 (272)
Q Consensus 259 P~ISeAA~~Qv~ 270 (272)
|+++|.||.|+.
T Consensus 90 Pv~GdiAe~~~~ 101 (105)
T COG4818 90 PVVGDIAEQQIY 101 (105)
T ss_pred ceechHHHHHHh
Confidence 999999999984
No 3
>PF09685 Tic20: Tic20-like protein; InterPro: IPR019109 This entry represents a group of uncharacterised conserved proteins including a chloroplast protein import component called Tic20. Chloroplast function requires the import of nuclear encoded proteins from the cytoplasm across the chloroplast double membrane. This is accomplished by two protein complexes, the Toc complex located at the outer membrane and the Tic complex located at the inner membrane. The Toc complex recognises specific proteins by a cleavable N-terminal sequence and is primarily responsible for translocation through the outer membrane, while the Tic complex translocates the protein through the inner membrane. Tic20 is a core member of the Tic complex and is deeply embedded in the inner envelope membrane. It is thought to function as a protein conducting component of the Tic complex [].
Probab=98.71 E-value=2.7e-07 Score=72.53 Aligned_cols=80 Identities=16% Similarity=0.264 Sum_probs=58.2
Q ss_pred HHHcCCCCCceehhHHHHHHHHHHHHHHHHHHHhhchhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCcchh
Q 024089 183 GVVRRKEWPHFFRFHVVMGMLLEIALQVVGTASTWLPYGI-YWGKLGMHFWTAVAFGFLFTVLECIRCALRGMYADLPFF 261 (272)
Q Consensus 183 ~VVRN~~is~FVRFNaMQAILLdI~L~l~~li~~~lP~~~-g~g~lg~~~~~~vfl~~l~~vi~ci~~Al~G~ya~IP~I 261 (272)
.++|+++ ++|+|+|+.||+...+...+..++...+.... ....++..++..+.+..+...++++.+|..|+..+.|++
T Consensus 27 ~~~~k~~-~~~vr~ha~qal~~~i~~~i~~~i~~~l~~~~~~~~~i~~~~~~~~~l~~~v~~I~~~~~a~~g~~~~~P~~ 105 (109)
T PF09685_consen 27 WIVKKDK-SPFVRFHAKQALNFQITFLIISIILFILSFILIFFIGIGILLLIVLWLLSLVLSIIGAIKANKGEPYRYPFI 105 (109)
T ss_pred HHHcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeeecCee
Confidence 3556666 99999999999999999988888877764432 111223333333334556667778889999999999998
Q ss_pred hH
Q 024089 262 CD 263 (272)
Q Consensus 262 Se 263 (272)
++
T Consensus 106 ~~ 107 (109)
T PF09685_consen 106 GK 107 (109)
T ss_pred ec
Confidence 76
No 4
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=53.48 E-value=1.3e+02 Score=34.04 Aligned_cols=24 Identities=17% Similarity=0.056 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhhcCcccCcchh
Q 024089 238 GFLFTVLECIRCALRGMYADLPFF 261 (272)
Q Consensus 238 ~~l~~vi~ci~~Al~G~ya~IP~I 261 (272)
.++....|-+..++.|+..++|.|
T Consensus 1018 ~wvv~~l~Pf~kgl~gR~~r~P~~ 1041 (1079)
T PLN02638 1018 FWVIVHLYPFLKGLMGRQNRTPTI 1041 (1079)
T ss_pred HHHHHHHHHHHHHHhccCCCCCee
Confidence 455566666777788999999976
No 5
>PLN02248 cellulose synthase-like protein
Probab=37.46 E-value=3.8e+02 Score=30.68 Aligned_cols=26 Identities=15% Similarity=0.037 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHhhcCcccCcchh
Q 024089 236 AFGFLFTVLECIRCALRGMYADLPFF 261 (272)
Q Consensus 236 fl~~l~~vi~ci~~Al~G~ya~IP~I 261 (272)
+..++....|-+..++.|+..++|.|
T Consensus 1075 ~s~Wvv~~lyPf~kGL~gR~gr~P~i 1100 (1135)
T PLN02248 1075 FSFWVLAHLYPFAKGLMGRRGRTPTI 1100 (1135)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCee
Confidence 33555666677777788999999976
No 6
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=36.65 E-value=1.7e+02 Score=26.29 Aligned_cols=42 Identities=14% Similarity=0.077 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHcCCCCCceehhHHHHHHHHHHHHHHHHHHHhhc
Q 024089 174 MAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVVGTASTWL 218 (272)
Q Consensus 174 liiFf~LyL~VVRN~~is~FVRFNaMQAILLdI~L~l~~li~~~l 218 (272)
+..+..+|+...|| .+|.|==..--..|-+.+.+-+++..++
T Consensus 123 l~~~~~iyfl~~K~---~~~~rA~~~~~~~L~~G~~lGs~l~~~l 164 (194)
T PF11833_consen 123 LGLGACIYFLNRKE---RKLGRAFLWTLGGLVVGLILGSLLASWL 164 (194)
T ss_pred HHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33444577777666 5666533333333444444445555555
No 7
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=34.15 E-value=2.3e+02 Score=27.47 Aligned_cols=78 Identities=18% Similarity=0.223 Sum_probs=47.7
Q ss_pred HHHHHhhhhhhHHhHHHhhhh-cChhHHHHhhhhHHHH------HhhccchHHHHHHH--HHHHHHHHcCCCCCceehhH
Q 024089 127 CIPYLMPLHETWMYAETAYHL-HPFLEDFEYLTYPFLE------AIGKLPVWFLMAYF--FVAYLGVVRRKEWPHFFRFH 197 (272)
Q Consensus 127 ~LpYLLPL~d~l~fG~~l~~~-fP~l~~l~~~~~Pll~------~~~slP~~~~liiF--f~LyL~VVRN~~is~FVRFN 197 (272)
.--|+.||++.+ -|+.++.. ...+|.+. ......+ ..+++| |..+.+- |.+|..+.| .+..+
T Consensus 103 LGY~InPL~~Vl-lG~lflkErls~~Q~iA-V~lA~~GV~~~~~~~g~lp-wval~la~sf~~Ygl~RK------~~~v~ 173 (293)
T COG2962 103 LGYFINPLVNVL-LGRLFLKERLSRLQWIA-VGLAAAGVLIQTWLLGSLP-WVALALALSFGLYGLLRK------KLKVD 173 (293)
T ss_pred hHHHHHHHHHHH-HHHHHHHhhccHHHHHH-HHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHHHHHH------hcCCc
Confidence 345677888753 45544433 34445433 2222222 238899 8766655 457776633 57789
Q ss_pred HHHHHHHHHHHHHHHH
Q 024089 198 VVMGMLLEIALQVVGT 213 (272)
Q Consensus 198 aMQAILLdI~L~l~~l 213 (272)
++|++.+|+.+..+--
T Consensus 174 a~~g~~lE~l~l~p~a 189 (293)
T COG2962 174 ALTGLTLETLLLLPVA 189 (293)
T ss_pred hHHhHHHHHHHHhHHH
Confidence 9999999988865543
No 8
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.17 E-value=1.5e+02 Score=31.52 Aligned_cols=91 Identities=15% Similarity=0.291 Sum_probs=48.7
Q ss_pred hccchHHHHHHHHHHHHHH---------------------HcCCCCCceeh-----hHHHHHHHHHHHHHHHHHHHhhc-
Q 024089 166 GKLPVWFLMAYFFVAYLGV---------------------VRRKEWPHFFR-----FHVVMGMLLEIALQVVGTASTWL- 218 (272)
Q Consensus 166 ~slP~~~~liiFf~LyL~V---------------------VRN~~is~FVR-----FNaMQAILLdI~L~l~~li~~~l- 218 (272)
+-+| |..++.++.|+++| ||-++++|.|= +|+.+++++--++=+..+....+
T Consensus 428 gAvP-F~T~~~ll~LwF~isVPLsf~G~y~g~kk~~~e~PvrTNqIpRqIP~q~~y~~~~~~ili~GilPFg~ifIELfF 506 (628)
T KOG1278|consen 428 GAVP-FSTMVALLFLWFGISVPLSFVGGYFGFKKPAIEHPVRTNQIPRQIPEQPWYLNPIPSILIAGILPFGAIFIELFF 506 (628)
T ss_pred Cccc-HHHHHHHHHHHHHhhhhHHHhhHHhhccCCCCCCCcccCCCcccCCCCccccchhhHHHhhcccchHHHHHHHHH
Confidence 3378 56677777777765 45556777663 45667766554443333332222
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCcccC
Q 024089 219 PYGIYWGKLGMHFWTAVAFGFLFTVLECIRCALRGMYAD 257 (272)
Q Consensus 219 P~~~g~g~lg~~~~~~vfl~~l~~vi~ci~~Al~G~ya~ 257 (272)
-+-..|..-.=.++.++|+..+..++-|+.-++.+-|..
T Consensus 507 I~~SiW~~qfYY~FGFLFlvfiiLvvtcaeisIvl~Yf~ 545 (628)
T KOG1278|consen 507 ILSSIWLNQFYYMFGFLFLVFIILVVTCAEISIVLTYFQ 545 (628)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122111112345667777777777766655555543
No 9
>PLN02400 cellulose synthase
Probab=25.20 E-value=7.6e+02 Score=28.26 Aligned_cols=24 Identities=17% Similarity=0.067 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhhcCcccCcchh
Q 024089 238 GFLFTVLECIRCALRGMYADLPFF 261 (272)
Q Consensus 238 ~~l~~vi~ci~~Al~G~ya~IP~I 261 (272)
.++....|-+..++.|+..++|.+
T Consensus 1023 ~wvvv~l~Pf~kgL~gR~~r~P~~ 1046 (1085)
T PLN02400 1023 IWVIAHLYPFLKGLLGRQNRTPTI 1046 (1085)
T ss_pred HHHHHHHHHHHHHHhccCCCCcee
Confidence 455556666667788999999976
No 10
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=22.97 E-value=2.5e+02 Score=24.72 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=23.3
Q ss_pred hccchHHHHHHHHHHHHHHHcCC-CCCcee
Q 024089 166 GKLPVWFLMAYFFVAYLGVVRRK-EWPHFF 194 (272)
Q Consensus 166 ~slP~~~~liiFf~LyL~VVRN~-~is~FV 194 (272)
..+|...++.+|.+.|++++++. ++|-.+
T Consensus 69 ~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~ 98 (153)
T PF11947_consen 69 VGIPTALGVAVFVVFYYLKSRQIVDVPPWA 98 (153)
T ss_pred hchHHHHHHHHHHHHHHHHhccccccCchH
Confidence 36788899999999999888873 677665
No 11
>COG3296 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.84 E-value=4e+02 Score=23.27 Aligned_cols=23 Identities=17% Similarity=0.046 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhhcCcccCcch
Q 024089 238 GFLFTVLECIRCALRGMYADLPF 260 (272)
Q Consensus 238 ~~l~~vi~ci~~Al~G~ya~IP~ 260 (272)
..+..++-+..+|..|+..+.|+
T Consensus 115 ~~lv~ti~a~~Ka~eGq~YryPL 137 (143)
T COG3296 115 LSLVLTIIAAIKAYEGQEYRYPL 137 (143)
T ss_pred HHHHHHHHHHHHhhCCceeeeee
Confidence 33444455556799999999986
No 12
>PF05767 Pox_A14: Poxvirus virion envelope protein A14; InterPro: IPR008785 This family consists of several Poxvirus virion envelope protein A14-like sequences. A14 is a component of the virion membrane and has been found to be an H1 phosphatase substrate in vivo and in vitro. A14 is hyperphosphorylated on serine residues in the absence of H1 expression [].; GO: 0019031 viral envelope
Probab=21.17 E-value=1.3e+02 Score=24.51 Aligned_cols=28 Identities=29% Similarity=0.526 Sum_probs=22.5
Q ss_pred cCCCCCCCCChHHHHHHHHHHHhhhhhh
Q 024089 110 RFPPMTKKPRWWWRSLACIPYLMPLHET 137 (272)
Q Consensus 110 ~~p~n~~kP~~~~R~lA~LpYLLPL~d~ 137 (272)
.|.+|+++-+-.||.++.+.+.+-..-.
T Consensus 32 dfsK~~~~~~~~wRalSii~FI~giil~ 59 (92)
T PF05767_consen 32 DFSKNTKPTDYTWRALSIICFILGIILT 59 (92)
T ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 3567888888899999999998876643
No 13
>COG1459 PulF Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=20.50 E-value=4.2e+02 Score=26.39 Aligned_cols=13 Identities=23% Similarity=0.314 Sum_probs=9.9
Q ss_pred ccCcchhhHHHhh
Q 024089 255 YADLPFFCDAACI 267 (272)
Q Consensus 255 ya~IP~ISeAA~~ 267 (272)
.-++|++++-.+.
T Consensus 248 llrlP~~g~l~~~ 260 (397)
T COG1459 248 LLRLPLFGKLVRK 260 (397)
T ss_pred HhcCCcHHHHHHH
Confidence 3489999988764
No 14
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=20.42 E-value=2.3e+02 Score=24.44 Aligned_cols=14 Identities=29% Similarity=0.498 Sum_probs=11.5
Q ss_pred HHHHHHHhhhhhhH
Q 024089 125 LACIPYLMPLHETW 138 (272)
Q Consensus 125 lA~LpYLLPL~d~l 138 (272)
.|.+.|++||+-.+
T Consensus 77 aa~lvYllPLl~li 90 (154)
T PRK10862 77 SALLVYMTPLVGLF 90 (154)
T ss_pred HHHHHHHHHHHHHH
Confidence 68899999999544
No 15
>PLN02195 cellulose synthase A
Probab=20.31 E-value=1.3e+03 Score=26.22 Aligned_cols=24 Identities=17% Similarity=0.038 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhhcCcccCcchh
Q 024089 238 GFLFTVLECIRCALRGMYADLPFF 261 (272)
Q Consensus 238 ~~l~~vi~ci~~Al~G~ya~IP~I 261 (272)
.++....|-+..++.|+..++|.|
T Consensus 914 ~wvv~~~~Pf~kgl~gR~~r~P~~ 937 (977)
T PLN02195 914 FWVILHLYPFLKGLMGRQNRTPTI 937 (977)
T ss_pred HHHHHHHHHHHHHHhccCCCCCee
Confidence 555566667777788999999976
Done!