Your job contains 1 sequence.
>024094
MYQRLDMITPGVDAQGNPLDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVG
NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF
MHLKRISRDLRRQLFGRYRRRHSRSRSRSRSPYRHRSHEDRSHSGHGRRYDDRDKYYESR
SRRHRSTSPSHRRGRSRSPGGRRYHSPVREGSEERRAKIEQWNREREQQEEAYKGNTDGG
NNDQGINNDGLMQNGNGYHSYKQQPEQGGNEY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024094
(272 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2196929 - symbol:ATU2AF35A species:3702 "Arabi... 521 2.3e-56 2
TAIR|locus:2165447 - symbol:U2AF35B species:3702 "Arabido... 543 2.1e-52 1
GENEDB_PFALCIPARUM|PF11_0200 - symbol:PF11_0200 "U2 snRNP... 318 3.8e-33 2
UNIPROTKB|Q8IIH4 - symbol:PF11_0200 "U2 snRNP auxiliary f... 318 3.8e-33 2
DICTYBASE|DDB_G0285077 - symbol:u2af1 "CCHC-type zinc fin... 323 5.5e-32 2
UNIPROTKB|F1PU17 - symbol:U2AF1L4 "Uncharacterized protei... 314 3.3e-30 2
UNIPROTKB|F1RM65 - symbol:U2AF1L4 "Uncharacterized protei... 314 3.3e-30 2
MGI|MGI:2678374 - symbol:U2af1l4 "U2 small nuclear RNA au... 314 3.3e-30 2
RGD|1305600 - symbol:U2af1l4 "U2 small nuclear RNA auxili... 314 3.3e-30 2
UNIPROTKB|Q3T127 - symbol:U2AF1L4 "Splicing factor U2AF 2... 313 4.2e-30 2
ZFIN|ZDB-GENE-020419-1 - symbol:u2af1 "U2(RNU2) small nuc... 324 3.4e-29 1
UNIPROTKB|Q98SE2 - symbol:U2AF1 "U2snRNP auxiliary factor... 323 4.4e-29 1
UNIPROTKB|A1A4K8 - symbol:U2AF1 "Splicing factor U2AF 35 ... 323 4.4e-29 1
UNIPROTKB|F1PUP0 - symbol:U2AF1 "Uncharacterized protein"... 323 4.4e-29 1
UNIPROTKB|J9P492 - symbol:U2AF1 "Uncharacterized protein"... 323 4.4e-29 1
UNIPROTKB|Q01081 - symbol:U2AF1 "Splicing factor U2AF 35 ... 323 4.4e-29 1
MGI|MGI:98884 - symbol:U2af1 "U2 small nuclear ribonucleo... 323 4.4e-29 1
FB|FBgn0017457 - symbol:U2af38 "U2 small nuclear riboprot... 318 1.5e-28 1
UNIPROTKB|Q8WU68 - symbol:U2AF1L4 "Splicing factor U2AF 2... 310 1.0e-27 1
WB|WBGene00006698 - symbol:uaf-2 species:6239 "Caenorhabd... 305 3.5e-27 1
POMBASE|SPAP8A3.06 - symbol:SPAP8A3.06 "U2AF small subuni... 299 1.5e-26 1
UNIPROTKB|G4MRL7 - symbol:MGG_09948 "Splicing factor U2AF... 265 6.1e-23 1
ASPGD|ASPL0000060533 - symbol:AN9362 species:162425 "Emer... 264 7.8e-23 1
CGD|CAL0004873 - symbol:TRY2 species:5476 "Candida albica... 203 6.5e-16 1
UNIPROTKB|Q59LX5 - symbol:UAF21 "Potential spliceosomal U... 203 6.5e-16 1
UNIPROTKB|I3LF64 - symbol:ZRSR2 "Uncharacterized protein"... 191 9.4e-16 2
UNIPROTKB|G3MYL6 - symbol:ZRSR2Y "Uncharacterized protein... 196 6.5e-15 1
UNIPROTKB|F1PIC2 - symbol:F1PIC2 "Uncharacterized protein... 192 1.9e-14 1
UNIPROTKB|F1N5D0 - symbol:ZRSR2 "Uncharacterized protein"... 191 2.7e-14 1
UNIPROTKB|Q15695 - symbol:ZRSR1 "U2 small nuclear ribonuc... 191 2.8e-14 1
UNIPROTKB|Q15696 - symbol:ZRSR2 "U2 small nuclear ribonuc... 191 2.8e-14 1
UNIPROTKB|I3LMZ7 - symbol:LOC100624937 "Uncharacterized p... 188 3.4e-14 1
MGI|MGI:98885 - symbol:Zrsr1 "zinc finger (CCCH type), RN... 189 3.5e-14 1
RGD|1561824 - symbol:Zrsr1 "zinc finger (CCCH type), RNA ... 189 3.5e-14 1
MGI|MGI:103287 - symbol:Zrsr2 "zinc finger (CCCH type), R... 186 9.0e-14 1
RGD|1559763 - symbol:Zrsr2 "zinc finger (CCCH type), RNA ... 186 1.2e-13 1
ZFIN|ZDB-GENE-030131-1495 - symbol:zrsr2 "zinc finger (CC... 187 1.3e-13 1
UNIPROTKB|F1NHR6 - symbol:ZRSR2 "Uncharacterized protein"... 184 1.5e-13 1
TAIR|locus:2012843 - symbol:AT1G10320 species:3702 "Arabi... 186 2.2e-13 1
CGD|CAL0000603 - symbol:orf19.53 species:5476 "Candida al... 174 1.1e-12 1
UNIPROTKB|F1PT19 - symbol:F1PT19 "Uncharacterized protein... 167 9.0e-12 1
FB|FBgn0031628 - symbol:CG3294 species:7227 "Drosophila m... 149 1.1e-11 2
>TAIR|locus:2196929 [details] [associations]
symbol:ATU2AF35A species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048573
"photoperiodism, flowering" evidence=RCA;IMP] [GO:0007067 "mitosis"
evidence=RCA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642
PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AC012375 GO:GO:0048573 HSSP:Q01081 PANTHER:PTHR12620
EMBL:AC005916 eggNOG:NOG323920 HOGENOM:HOG000178619 KO:K12836
EMBL:AF409139 EMBL:AF344324 EMBL:AY065202 EMBL:AY090343
EMBL:AY096507 EMBL:AY122894 EMBL:AY088540 IPI:IPI00530007
RefSeq:NP_174086.1 UniGene:At.20200 UniGene:At.63995
UniGene:At.67851 ProteinModelPortal:Q9S709 SMR:Q9S709 STRING:Q9S709
PaxDb:Q9S709 PRIDE:Q9S709 EnsemblPlants:AT1G27650.1 GeneID:839657
KEGG:ath:AT1G27650 GeneFarm:4543 TAIR:At1g27650 InParanoid:Q9S709
OMA:NDNGRKG PhylomeDB:Q9S709 ProtClustDB:CLSN2686618
Genevestigator:Q9S709 Uniprot:Q9S709
Length = 296
Score = 521 (188.5 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 96/127 (75%), Positives = 105/127 (82%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQXXXXXXXXXXXXXXNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVDAQG PLDPRKIQ K+GEIESLNICDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYVQF+EE+QAA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 111 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 170
Query: 121 MHLKRIS 127
MH+K +S
Sbjct: 171 MHVKLVS 177
Score = 77 (32.2 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 14/15 (93%), Positives = 15/15 (100%)
Query: 209 REGSEERRAKIEQWN 223
REGSEERRA+IEQWN
Sbjct: 271 REGSEERRARIEQWN 285
>TAIR|locus:2165447 [details] [associations]
symbol:U2AF35B species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048573
"photoperiodism, flowering" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008380
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0048573
EMBL:AB008264 EMBL:AB007647 HSSP:Q01081 PANTHER:PTHR12620
UniGene:At.8456 eggNOG:NOG323920 HOGENOM:HOG000178619 KO:K12836
OMA:SERHDRD ProtClustDB:CLSN2686618 EMBL:AF409140 EMBL:AY136436
EMBL:BT000219 IPI:IPI00531951 RefSeq:NP_199096.1 RefSeq:NP_974870.1
UniGene:At.25814 ProteinModelPortal:Q9FMY5 SMR:Q9FMY5 IntAct:Q9FMY5
STRING:Q9FMY5 PaxDb:Q9FMY5 PRIDE:Q9FMY5 EnsemblPlants:AT5G42820.1
EnsemblPlants:AT5G42820.2 GeneID:834293 KEGG:ath:AT5G42820
GeneFarm:4540 TAIR:At5g42820 InParanoid:Q9FMY5 PhylomeDB:Q9FMY5
Genevestigator:Q9FMY5 Uniprot:Q9FMY5
Length = 283
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 115/228 (50%), Positives = 130/228 (57%)
Query: 1 MYQRLDMITPGVDAQGNPLDPRKIQXXXXXXXXXXXXXXNKYGEIESLNICDNLADHMVG 60
MYQR DMITPGVD QG PLDP KIQ NK+GE+ESLN+CDNLADHM+G
Sbjct: 51 MYQRPDMITPGVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIG 110
Query: 61 NVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNF 120
NVYV F+EE+ AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNF
Sbjct: 111 NVYVLFKEEDHAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNF 170
Query: 121 MHLKRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRSHSGHGRRYD--DRDKYYE 178
MH+K+IS R HS R D DRD++
Sbjct: 171 MHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPR--RKREHSRERERGDVRDRDRHGN 228
Query: 179 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX---VREGSEERRAKIEQWN 223
VREGSEERRA+IEQWN
Sbjct: 229 GKRSSDRSERHDRDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWN 276
>GENEDB_PFALCIPARUM|PF11_0200 [details] [associations]
symbol:PF11_0200 "U2 snRNP auxiliary factor,
small subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0005686 "U2 snRNP" evidence=ISS] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR003954 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00361 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0000398 GO:GO:0005686 HSSP:Q01081 PANTHER:PTHR12620
EMBL:AE014186 HOGENOM:HOG000178619 KO:K12836 RefSeq:XP_001347871.1
ProteinModelPortal:Q8IIH4 IntAct:Q8IIH4 MINT:MINT-1572548
EnsemblProtists:PF11_0200:mRNA GeneID:810747 KEGG:pfa:PF11_0200
EuPathDB:PlasmoDB:PF3D7_1119300 OMA:DFREARC ProtClustDB:CLSZ2733259
Uniprot:Q8IIH4
Length = 294
Score = 318 (117.0 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 49/86 (56%), Positives = 70/86 (81%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE + +CDN+ DH++GNVY+++ E+ A +A+ L+GRFYAG+P+ ++++PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVNELNGRFYAGKPLQIEYTPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRI 126
EA CRQ+ E C RGGYCNFMH+K +
Sbjct: 152 EARCRQFVEGQCRRGGYCNFMHIKHV 177
Score = 59 (25.8 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 209 REGSEERRAKIEQWN 223
RE S ERR KIE+WN
Sbjct: 258 RENSAERREKIERWN 272
>UNIPROTKB|Q8IIH4 [details] [associations]
symbol:PF11_0200 "U2 snRNP auxiliary factor, small subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005686 "U2
snRNP" evidence=ISS] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR003954 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00361 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398
GO:GO:0005686 HSSP:Q01081 PANTHER:PTHR12620 EMBL:AE014186
HOGENOM:HOG000178619 KO:K12836 RefSeq:XP_001347871.1
ProteinModelPortal:Q8IIH4 IntAct:Q8IIH4 MINT:MINT-1572548
EnsemblProtists:PF11_0200:mRNA GeneID:810747 KEGG:pfa:PF11_0200
EuPathDB:PlasmoDB:PF3D7_1119300 OMA:DFREARC ProtClustDB:CLSZ2733259
Uniprot:Q8IIH4
Length = 294
Score = 318 (117.0 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 49/86 (56%), Positives = 70/86 (81%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE + +CDN+ DH++GNVY+++ E+ A +A+ L+GRFYAG+P+ ++++PVTDFR
Sbjct: 92 KYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEKAVNELNGRFYAGKPLQIEYTPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRI 126
EA CRQ+ E C RGGYCNFMH+K +
Sbjct: 152 EARCRQFVEGQCRRGGYCNFMHIKHV 177
Score = 59 (25.8 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 209 REGSEERRAKIEQWN 223
RE S ERR KIE+WN
Sbjct: 258 RENSAERREKIERWN 272
>DICTYBASE|DDB_G0285077 [details] [associations]
symbol:u2af1 "CCHC-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005686 "U2 snRNP" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR003954 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00361 dictyBase:DDB_G0285077
GenomeReviews:CM000153_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 EMBL:AAFI02000073 GO:GO:0003723 GO:GO:0000398
GO:GO:0005686 PANTHER:PTHR12620 eggNOG:NOG323920 KO:K12836
RefSeq:XP_639991.1 ProteinModelPortal:Q54NS6
EnsemblProtists:DDB0233354 GeneID:8624909 KEGG:ddi:DDB_G0285077
InParanoid:Q54NS6 OMA:DFTEARC Uniprot:Q54NS6
Length = 471
Score = 323 (118.8 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 54/83 (65%), Positives = 69/83 (83%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYG+++ LN+C NL DH+VGNVYV++++E+ A ++K L GRFY GRPII +FSPVTDF
Sbjct: 93 KYGQVDLLNVCANLGDHLVGNVYVKYQKEDDANESIKGLKGRFYDGRPIISEFSPVTDFT 152
Query: 101 EATCRQYEENTCNRGGYCNFMHL 123
EA CRQY+ TCNRGG+CNFMHL
Sbjct: 153 EARCRQYDIGTCNRGGFCNFMHL 175
Score = 43 (20.2 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 160 DRSHSGHGRRYD-DRDK 175
DR G+GR D DRD+
Sbjct: 262 DRDRDGYGRSRDYDRDR 278
Score = 43 (20.2 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 160 DRSHSGHGRRYD----DRDK 175
DR + G G RYD DRD+
Sbjct: 244 DRDYGGGGGRYDRDYRDRDR 263
Score = 41 (19.5 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 161 RSHSGHGRRYDDRDKYY 177
R G+ R Y DRD+ Y
Sbjct: 231 RGGGGYDRDYRDRDRDY 247
Score = 37 (18.1 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 160 DRSHSGHGRRYDDRDK 175
D G+ R Y DRD+
Sbjct: 207 DYGRRGYDRDYRDRDR 222
>UNIPROTKB|F1PU17 [details] [associations]
symbol:U2AF1L4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 PANTHER:PTHR12620 GeneTree:ENSGT00530000063193
OMA:SERHDRD EMBL:AAEX03001009 ProteinModelPortal:F1PU17
Ensembl:ENSCAFT00000011030 Uniprot:F1PU17
Length = 220
Score = 314 (115.6 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 54/87 (62%), Positives = 68/87 (78%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
E+ CRQYE C RGG+CNFMHL+ IS
Sbjct: 152 ESCCRQYEMGECTRGGFCNFMHLRPIS 178
Score = 35 (17.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 161 RSHSGHGRRYDDR 173
RSH+GH R +R
Sbjct: 197 RSHTGHRPRERNR 209
>UNIPROTKB|F1RM65 [details] [associations]
symbol:U2AF1L4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 OMA:GQAVHGE
EMBL:FP243365 Ensembl:ENSSSCT00000003200 ArrayExpress:F1RM65
Uniprot:F1RM65
Length = 232
Score = 314 (115.6 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 54/87 (62%), Positives = 68/87 (78%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
E+ CRQYE C RGG+CNFMHL+ IS
Sbjct: 152 ESCCRQYEMGECTRGGFCNFMHLRPIS 178
Score = 35 (17.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 161 RSHSGHGRRYDDR 173
RSH+GH R +R
Sbjct: 209 RSHAGHRPRERNR 221
>MGI|MGI:2678374 [details] [associations]
symbol:U2af1l4 "U2 small nuclear RNA auxiliary factor 1-like
4" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 MGI:MGI:2678374 GO:GO:0008380
GO:GO:0000166 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
HSSP:Q01081 PANTHER:PTHR12620 CleanEx:MM_U2AF1L4 eggNOG:NOG323920
GeneTree:ENSGT00530000063193 HOGENOM:HOG000178619
HOVERGEN:HBG054605 KO:K12836 OrthoDB:EOG4MSD07 CTD:199746
OMA:SERHDRD EMBL:AF419339 EMBL:AF419340 EMBL:AK160974 EMBL:BC060972
IPI:IPI00221628 RefSeq:NP_739566.1 UniGene:Mm.34790
ProteinModelPortal:Q8BGJ9 SMR:Q8BGJ9 IntAct:Q8BGJ9 STRING:Q8BGJ9
PhosphoSite:Q8BGJ9 PaxDb:Q8BGJ9 PRIDE:Q8BGJ9
Ensembl:ENSMUST00000043273 Ensembl:ENSMUST00000167042
Ensembl:ENSMUST00000171912 GeneID:233073 KEGG:mmu:233073
UCSC:uc009gfa.1 InParanoid:Q8BGJ9 NextBio:381535 Bgee:Q8BGJ9
Genevestigator:Q8BGJ9 Uniprot:Q8BGJ9
Length = 220
Score = 314 (115.6 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 54/87 (62%), Positives = 68/87 (78%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
E+ CRQYE C RGG+CNFMHL+ IS
Sbjct: 152 ESCCRQYEMGECTRGGFCNFMHLRPIS 178
Score = 35 (17.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 161 RSHSGHGRRYDDR 173
RSH+GH R +R
Sbjct: 197 RSHTGHRPRERNR 209
>RGD|1305600 [details] [associations]
symbol:U2af1l4 "U2 small nuclear RNA auxiliary factor 1-like 4"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
RGD:1305600 GO:GO:0008380 GO:GO:0000166 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 HSSP:Q01081 PANTHER:PTHR12620 eggNOG:NOG323920
GeneTree:ENSGT00530000063193 HOGENOM:HOG000178619
HOVERGEN:HBG054605 KO:K12836 CTD:199746 OMA:GQAVHGE EMBL:AY325237
EMBL:AY325238 IPI:IPI00365692 IPI:IPI00382197 RefSeq:NP_001008775.1
UniGene:Rn.145185 ProteinModelPortal:Q7TP17 SMR:Q7TP17
STRING:Q7TP17 PhosphoSite:Q7TP17 PRIDE:Q7TP17
Ensembl:ENSRNOT00000038154 Ensembl:ENSRNOT00000046569 GeneID:361542
KEGG:rno:361542 UCSC:RGD:1305600 NextBio:676661
Genevestigator:Q7TP17 Uniprot:Q7TP17
Length = 220
Score = 314 (115.6 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 54/87 (62%), Positives = 68/87 (78%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
E+ CRQYE C RGG+CNFMHL+ IS
Sbjct: 152 ESCCRQYEMGECTRGGFCNFMHLRPIS 178
Score = 35 (17.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 161 RSHSGHGRRYDDR 173
RSH+GH R +R
Sbjct: 197 RSHTGHRPRERNR 209
>UNIPROTKB|Q3T127 [details] [associations]
symbol:U2AF1L4 "Splicing factor U2AF 26 kDa subunit"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
GO:GO:0008380 GO:GO:0000166 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 PANTHER:PTHR12620 eggNOG:NOG323920
GeneTree:ENSGT00530000063193 HOGENOM:HOG000178619
HOVERGEN:HBG054605 OrthoDB:EOG4MSD07 EMBL:BC102151 IPI:IPI00689642
RefSeq:NP_001029950.1 UniGene:Bt.13810 ProteinModelPortal:Q3T127
SMR:Q3T127 PRIDE:Q3T127 Ensembl:ENSBTAT00000032279 GeneID:615198
KEGG:bta:615198 CTD:199746 InParanoid:Q3T127 OMA:SERHDRD
NextBio:20899497 Uniprot:Q3T127
Length = 220
Score = 313 (115.2 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 54/87 (62%), Positives = 68/87 (78%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVYV+FR EE A RA+ L+ R++ G+ + + SPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNNRWFNGQAVHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
E+ CRQYE C RGG+CNFMHL+ IS
Sbjct: 152 ESCCRQYEMGECTRGGFCNFMHLRPIS 178
Score = 35 (17.4 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 161 RSHSGHGRRYDDR 173
RSH+GH R +R
Sbjct: 197 RSHTGHRPRERNR 209
>ZFIN|ZDB-GENE-020419-1 [details] [associations]
symbol:u2af1 "U2(RNU2) small nuclear RNA auxiliary
factor 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 ZFIN:ZDB-GENE-020419-1
GO:GO:0005634 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003723 PANTHER:PTHR12620 eggNOG:NOG323920
HOGENOM:HOG000178619 HOVERGEN:HBG054605 OrthoDB:EOG4MSD07
EMBL:BC098601 IPI:IPI00501023 UniGene:Dr.18312
ProteinModelPortal:Q4G0A1 SMR:Q4G0A1 STRING:Q4G0A1
InParanoid:Q4G0A1 ArrayExpress:Q4G0A1 Uniprot:Q4G0A1
Length = 250
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 56/87 (64%), Positives = 70/87 (80%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ +L+ R++ G+PI + SPVTDFR
Sbjct: 91 KYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVINLNNRWFNGQPIHAELSPVTDFR 150
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
EA CRQYE C RGG+CNFMHLK IS
Sbjct: 151 EACCRQYEMGECTRGGFCNFMHLKPIS 177
>UNIPROTKB|Q98SE2 [details] [associations]
symbol:U2AF1 "U2snRNP auxiliary factor small subunit"
species:9031 "Gallus gallus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0050733 "RS domain binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0071013 HSSP:Q01081 PANTHER:PTHR12620 CTD:7307
eggNOG:NOG323920 GeneTree:ENSGT00530000063193 HOGENOM:HOG000178619
HOVERGEN:HBG054605 KO:K12836 OMA:DRGGNND OrthoDB:EOG4MSD07
EMBL:AADN02010856 EMBL:AADN02010857 EMBL:AJ291762 EMBL:AJ291763
EMBL:AJ291764 IPI:IPI00603228 RefSeq:NP_989986.2 UniGene:Gga.4951
SMR:Q98SE2 STRING:Q98SE2 Ensembl:ENSGALT00000026115 GeneID:395370
KEGG:gga:395370 InParanoid:Q98SE2 NextBio:20815454 Uniprot:Q98SE2
Length = 237
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 56/87 (64%), Positives = 69/87 (79%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFR
Sbjct: 92 KYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
EA CRQYE C RGG+CNFMHLK IS
Sbjct: 152 EACCRQYEMGECTRGGFCNFMHLKPIS 178
>UNIPROTKB|A1A4K8 [details] [associations]
symbol:U2AF1 "Splicing factor U2AF 35 kDa subunit"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=ISS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0050733 "RS domain binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
GO:GO:0008380 GO:GO:0000166 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0071013 PANTHER:PTHR12620 EMBL:BC126638 IPI:IPI00695600
RefSeq:NP_001073737.1 UniGene:Bt.23539 ProteinModelPortal:A1A4K8
SMR:A1A4K8 STRING:A1A4K8 PRIDE:A1A4K8 Ensembl:ENSBTAT00000015465
GeneID:512680 KEGG:bta:512680 CTD:7307 eggNOG:NOG323920
GeneTree:ENSGT00530000063193 HOGENOM:HOG000178619
HOVERGEN:HBG054605 InParanoid:A1A4K8 KO:K12836 OMA:DRGGNND
OrthoDB:EOG4MSD07 NextBio:20870505 Uniprot:A1A4K8
Length = 237
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 56/87 (64%), Positives = 69/87 (79%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFR
Sbjct: 92 KYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
EA CRQYE C RGG+CNFMHLK IS
Sbjct: 152 EACCRQYEMGECTRGGFCNFMHLKPIS 178
>UNIPROTKB|F1PUP0 [details] [associations]
symbol:U2AF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 PANTHER:PTHR12620 CTD:7307
GeneTree:ENSGT00530000063193 KO:K12836 EMBL:AAEX03016606
RefSeq:XP_003640135.1 ProteinModelPortal:F1PUP0
Ensembl:ENSCAFT00000016814 GeneID:478422 KEGG:cfa:478422
Uniprot:F1PUP0
Length = 240
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 56/87 (64%), Positives = 69/87 (79%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFR
Sbjct: 92 KYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
EA CRQYE C RGG+CNFMHLK IS
Sbjct: 152 EACCRQYEMGECTRGGFCNFMHLKPIS 178
>UNIPROTKB|J9P492 [details] [associations]
symbol:U2AF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 PANTHER:PTHR12620 CTD:7307
GeneTree:ENSGT00530000063193 KO:K12836 OMA:DRGGNND
EMBL:AAEX03016606 GeneID:478422 KEGG:cfa:478422
RefSeq:XP_003640134.1 ProteinModelPortal:J9P492
Ensembl:ENSCAFT00000047884 Uniprot:J9P492
Length = 240
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 56/87 (64%), Positives = 69/87 (79%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFR
Sbjct: 92 KYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
EA CRQYE C RGG+CNFMHLK IS
Sbjct: 152 EACCRQYEMGECTRGGFCNFMHLKPIS 178
>UNIPROTKB|Q01081 [details] [associations]
symbol:U2AF1 "Splicing factor U2AF 35 kDa subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0050733 "RS domain
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0016607 "nuclear speck" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0006397 "mRNA
processing" evidence=TAS] [GO:0015030 "Cajal body" evidence=TAS]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=TAS] [GO:0006406 "mRNA
export from nucleus" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031124 "mRNA 3'-end processing" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
GO:GO:0000166 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Reactome:REACT_1675 Gene3D:3.30.70.330 EMBL:CH471079 GO:GO:0003723
GO:GO:0015030 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
Reactome:REACT_1788 PANTHER:PTHR12620 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AP001631 EMBL:AP001748 CTD:7307
eggNOG:NOG323920 HOGENOM:HOG000178619 HOVERGEN:HBG054605 KO:K12836
OMA:DRGGNND OrthoDB:EOG4MSD07 EMBL:M96982 EMBL:AJ627978
EMBL:AF370386 EMBL:BC001177 EMBL:BC001923 IPI:IPI00005613
PIR:A46179 RefSeq:NP_001020374.1 RefSeq:NP_001020375.1
RefSeq:NP_006749.1 UniGene:Hs.365116 PDB:1JMT PDBsum:1JMT
ProteinModelPortal:Q01081 SMR:Q01081 DIP:DIP-1108N IntAct:Q01081
MINT:MINT-3024108 STRING:Q01081 PhosphoSite:Q01081 DMDM:267187
PaxDb:Q01081 PeptideAtlas:Q01081 PRIDE:Q01081 DNASU:7307
Ensembl:ENST00000291552 Ensembl:ENST00000380276
Ensembl:ENST00000398137 Ensembl:ENST00000459639
Ensembl:ENST00000464750 GeneID:7307 KEGG:hsa:7307 UCSC:uc002zcy.1
GeneCards:GC21M044513 HGNC:HGNC:12453 HPA:HPA044833 MIM:191317
neXtProt:NX_Q01081 PharmGKB:PA37103 PhylomeDB:Q01081 ChiTaRS:U2AF1
EvolutionaryTrace:Q01081 GenomeRNAi:7307 NextBio:28572
ArrayExpress:Q01081 Bgee:Q01081 CleanEx:HS_U2AF1
Genevestigator:Q01081 GermOnline:ENSG00000160201 Uniprot:Q01081
Length = 240
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 56/87 (64%), Positives = 69/87 (79%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFR
Sbjct: 92 KYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
EA CRQYE C RGG+CNFMHLK IS
Sbjct: 152 EACCRQYEMGECTRGGFCNFMHLKPIS 178
>MGI|MGI:98884 [details] [associations]
symbol:U2af1 "U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 1" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0050733 "RS domain binding"
evidence=IPI] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
MGI:MGI:98884 GO:GO:0008380 GO:GO:0000166 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 PANTHER:PTHR12620 CTD:7307
eggNOG:NOG323920 GeneTree:ENSGT00530000063193 HOGENOM:HOG000178619
HOVERGEN:HBG054605 KO:K12836 OrthoDB:EOG4MSD07 ChiTaRS:U2AF1
EMBL:AK008332 EMBL:AK012849 EMBL:AK088979 EMBL:AK150872
EMBL:BC002184 IPI:IPI00318548 RefSeq:NP_001157241.1
RefSeq:NP_077149.2 UniGene:Mm.379289 ProteinModelPortal:Q9D883
SMR:Q9D883 STRING:Q9D883 PaxDb:Q9D883 PRIDE:Q9D883
Ensembl:ENSMUST00000014684 GeneID:108121 KEGG:mmu:108121
InParanoid:Q9D883 NextBio:360106 Bgee:Q9D883 Genevestigator:Q9D883
GermOnline:ENSMUSG00000061613 Uniprot:Q9D883
Length = 239
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 56/87 (64%), Positives = 69/87 (79%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E +N+CDNL DH+VGNVYV+FR EE A +A+ L+ R++ G+PI + SPVTDFR
Sbjct: 92 KYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
EA CRQYE C RGG+CNFMHLK IS
Sbjct: 152 EACCRQYEMGECTRGGFCNFMHLKPIS 178
>FB|FBgn0017457 [details] [associations]
symbol:U2af38 "U2 small nuclear riboprotein auxiliary factor
38" species:7227 "Drosophila melanogaster" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS;NAS;IMP] [GO:0005686 "U2
snRNP" evidence=NAS;TAS] [GO:0008187 "poly-pyrimidine tract
binding" evidence=NAS;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0008380 "RNA splicing" evidence=IMP]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0007052
EMBL:AE014134 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071011 GO:GO:0000398
GO:GO:0005686 PANTHER:PTHR12620 GO:GO:0000381 GO:GO:0008187
eggNOG:NOG323920 GeneTree:ENSGT00530000063193 KO:K12836 OMA:DRGGNND
EMBL:U67066 EMBL:AY058537 PIR:JC6125 RefSeq:NP_477208.1
UniGene:Dm.4117 ProteinModelPortal:Q94535 SMR:Q94535 DIP:DIP-23299N
IntAct:Q94535 MINT:MINT-311934 STRING:Q94535 PaxDb:Q94535
EnsemblMetazoa:FBtr0078133 EnsemblMetazoa:FBtr0333408 GeneID:33201
KEGG:dme:Dmel_CG3582 CTD:33201 FlyBase:FBgn0017457
InParanoid:Q94535 OrthoDB:EOG48GTKF PhylomeDB:Q94535 ChiTaRS:U2af38
GenomeRNAi:33201 NextBio:782394 Bgee:Q94535 GermOnline:CG3582
Uniprot:Q94535
Length = 264
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 54/88 (61%), Positives = 67/88 (76%)
Query: 40 NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
+KYGEIE +N+CDNL DH+VGNVY++FR E A +A L+ R++ GRP+ + SPVTDF
Sbjct: 93 DKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDF 152
Query: 100 REATCRQYEENTCNRGGYCNFMHLKRIS 127
REA CRQYE C R G+CNFMHLK IS
Sbjct: 153 REACCRQYEMGECTRSGFCNFMHLKPIS 180
>UNIPROTKB|Q8WU68 [details] [associations]
symbol:U2AF1L4 "Splicing factor U2AF 26 kDa subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR003954 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00361 GO:GO:0008380
GO:GO:0000166 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
HSSP:Q01081 PANTHER:PTHR12620 EMBL:AD000671 CleanEx:HS_U2AF1L4
HOGENOM:HOG000178619 HOVERGEN:HBG054605 CTD:199746 EMBL:AY569437
EMBL:BC021186 IPI:IPI00102851 IPI:IPI00871981 IPI:IPI00872091
RefSeq:NP_001035515.1 RefSeq:NP_659424.2 UniGene:Hs.351558
ProteinModelPortal:Q8WU68 SMR:Q8WU68 IntAct:Q8WU68 STRING:Q8WU68
PhosphoSite:Q8WU68 DMDM:160358766 PaxDb:Q8WU68 PRIDE:Q8WU68
Ensembl:ENST00000292879 Ensembl:ENST00000378975
Ensembl:ENST00000412391 GeneID:199746 KEGG:hsa:199746
UCSC:uc002obe.3 UCSC:uc002obf.3 GeneCards:GC19M036233
HGNC:HGNC:23020 HPA:HPA046378 MIM:601080 neXtProt:NX_Q8WU68
PharmGKB:PA164742763 eggNOG:NOG252826 OMA:GQAVHGE GenomeRNAi:199746
NextBio:89722 ArrayExpress:Q8WU68 Bgee:Q8WU68 Genevestigator:Q8WU68
Uniprot:Q8WU68
Length = 220
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGEIE +N+CDNL DH+VGNVYV+FR EE RA+ LS R++ G+ + + SPVTDFR
Sbjct: 92 KYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNRWFNGQAVHGELSPVTDFR 151
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
E+ CRQYE C RGG+CNFMHL+ IS
Sbjct: 152 ESCCRQYEMGECTRGGFCNFMHLRPIS 178
>WB|WBGene00006698 [details] [associations]
symbol:uaf-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0030628 "pre-mRNA
3'-splice site binding" evidence=IDA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0000166 GO:GO:0046872
GO:GO:0018996 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0040011
GO:GO:0040035 HSSP:Q01081 PANTHER:PTHR12620 GO:GO:0030628
EMBL:AL117204 eggNOG:NOG323920 GeneTree:ENSGT00530000063193
HOGENOM:HOG000178619 KO:K12836 PIR:T31503 RefSeq:NP_503036.1
ProteinModelPortal:Q9U2U0 SMR:Q9U2U0 DIP:DIP-26717N IntAct:Q9U2U0
MINT:MINT-1068324 STRING:Q9U2U0 PaxDb:Q9U2U0
EnsemblMetazoa:Y116A8C.35.1 EnsemblMetazoa:Y116A8C.35.2
GeneID:178489 KEGG:cel:CELE_Y116A8C.35 UCSC:Y116A8C.35 CTD:178489
WormBase:Y116A8C.35 InParanoid:Q9U2U0 OMA:XAVSDVE NextBio:901340
Uniprot:Q9U2U0
Length = 285
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 50/87 (57%), Positives = 69/87 (79%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E +N+C+N+ +HMVGNVYV+F +EE A +A L+ R++ G+PI + PVTDFR
Sbjct: 101 KYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFR 160
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
E+ CRQ+E TC++GG+CNFMHLK IS
Sbjct: 161 ESRCRQHEVTTCSKGGFCNFMHLKAIS 187
>POMBASE|SPAP8A3.06 [details] [associations]
symbol:SPAP8A3.06 "U2AF small subunit, U2AF-23"
species:4896 "Schizosaccharomyces pombe" [GO:0000243 "commitment
complex" evidence=IDA] [GO:0000349 "generation of catalytic
spliceosome for first transesterification step" evidence=IDA]
[GO:0003723 "RNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005686 "U2 snRNP" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=IDA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR003954 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00361 PomBase:SPAP8A3.06 GO:GO:0005829
EMBL:CU329670 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000243 GO:GO:0000349
GO:GO:0005686 PANTHER:PTHR12620 GO:GO:0045292 eggNOG:NOG323920
HOGENOM:HOG000178619 KO:K12836 EMBL:U48234 PIR:T39243
RefSeq:NP_594945.1 ProteinModelPortal:Q09176 SMR:Q09176
IntAct:Q09176 STRING:Q09176 EnsemblFungi:SPAP8A3.06.1
GeneID:2542482 KEGG:spo:SPAP8A3.06 OMA:HETSECQ OrthoDB:EOG476P88
NextBio:20803537 Uniprot:Q09176
Length = 216
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 51/88 (57%), Positives = 67/88 (76%)
Query: 40 NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
+KYGE+E L +CDN+ DH+VGNVYV+F+ EE A A+ L+ R+Y+ RP+ + SPVTDF
Sbjct: 85 SKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESAQNAIDDLNSRWYSQRPVYAELSPVTDF 144
Query: 100 REATCRQYEENTCNRGGYCNFMHLKRIS 127
REA CRQ+E + C RGG CNFMH K+ S
Sbjct: 145 REACCRQHETSECQRGGLCNFMHAKKPS 172
>UNIPROTKB|G4MRL7 [details] [associations]
symbol:MGG_09948 "Splicing factor U2AF 23 kDa subunit"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:CM001231 PANTHER:PTHR12620 KO:K12836 RefSeq:XP_003710052.1
ProteinModelPortal:G4MRL7 EnsemblFungi:MGG_09948T0 GeneID:2680918
KEGG:mgr:MGG_09948 Uniprot:G4MRL7
Length = 209
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/87 (54%), Positives = 60/87 (68%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+E L +CDN DH++GNVY +F+ E+ A +A L+ R+YA RPI + SPVTDFR
Sbjct: 85 KYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKACDELNSRWYAARPIYCELSPVTDFR 144
Query: 101 EATCRQYEENTCNRGGYCNFMHLKRIS 127
EA CR C RGG+CNF+H K S
Sbjct: 145 EACCRLNSGEGCTRGGFCNFIHRKNPS 171
>ASPGD|ASPL0000060533 [details] [associations]
symbol:AN9362 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0000243 "commitment
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000349 "generation of catalytic
spliceosome for first transesterification step" evidence=IEA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0000166
EMBL:BN001308 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AACD01000172 PANTHER:PTHR12620 eggNOG:NOG323920
HOGENOM:HOG000178619 KO:K12836 OrthoDB:EOG476P88 OMA:NDNGRKG
RefSeq:XP_682631.1 ProteinModelPortal:Q5AQR8 STRING:Q5AQR8
EnsemblFungi:CADANIAT00001149 GeneID:2867825 KEGG:ani:AN9362.2
Uniprot:Q5AQR8
Length = 209
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 51/115 (44%), Positives = 68/115 (59%)
Query: 10 PGVDAQGNPLDPRKIQXXXXXXXXXXXXXXNKYGEIESLNICDNLADHMVGNVYVQFREE 69
P D + ++P ++Q KYGE+E L +CDN DH++GNVY +F+ E
Sbjct: 55 PAYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYE 113
Query: 70 EQAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLK 124
E A A +L+ R+YA RPI + SPVTDFREA CR C RGG+CNF+H K
Sbjct: 114 EDAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRK 168
>CGD|CAL0004873 [details] [associations]
symbol:TRY2 species:5476 "Candida albicans" [GO:0044011
"single-species biofilm formation on inanimate substrate"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IMP] [GO:1900189
"positive regulation of cell adhesion involved in single-species
biofilm formation" evidence=IMP] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 CGD:CAL0004873 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006357 GO:GO:0003723 GO:GO:0010811 GO:GO:1900189
GO:GO:0044011 EMBL:AACQ01000243 EMBL:AACQ01000242 PANTHER:PTHR12620
eggNOG:NOG323920 KO:K12836 RefSeq:XP_710731.1 RefSeq:XP_710740.1
ProteinModelPortal:Q59LX5 GeneID:3647660 GeneID:3647670
KEGG:cal:CaO19.11544 KEGG:cal:CaO19.4062 Uniprot:Q59LX5
Length = 371
Score = 203 (76.5 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 40 NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
+K G+I + +C+N +H+ GNVYV F E A A L+ ++ G+P+ D SPV DF
Sbjct: 223 SKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEWFNGKPVYSDLSPVNDF 282
Query: 100 REATCRQYEE-NTCNRGGYCNFMHLK 124
+A C +Y + + C RG CN+MH++
Sbjct: 283 NDACCEEYRDYHDCQRGAMCNYMHVR 308
>UNIPROTKB|Q59LX5 [details] [associations]
symbol:UAF21 "Potential spliceosomal U2AF small subunit"
species:237561 "Candida albicans SC5314" [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IMP] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] [GO:1900189 "positive regulation
of cell adhesion involved in single-species biofilm formation"
evidence=IMP] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642
PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356
CGD:CAL0004873 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0003723
GO:GO:0010811 GO:GO:1900189 GO:GO:0044011 EMBL:AACQ01000243
EMBL:AACQ01000242 PANTHER:PTHR12620 eggNOG:NOG323920 KO:K12836
RefSeq:XP_710731.1 RefSeq:XP_710740.1 ProteinModelPortal:Q59LX5
GeneID:3647660 GeneID:3647670 KEGG:cal:CaO19.11544
KEGG:cal:CaO19.4062 Uniprot:Q59LX5
Length = 371
Score = 203 (76.5 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 40 NKYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDF 99
+K G+I + +C+N +H+ GNVYV F E A A L+ ++ G+P+ D SPV DF
Sbjct: 223 SKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEWFNGKPVYSDLSPVNDF 282
Query: 100 REATCRQYEE-NTCNRGGYCNFMHLK 124
+A C +Y + + C RG CN+MH++
Sbjct: 283 NDACCEEYRDYHDCQRGAMCNYMHVR 308
>UNIPROTKB|I3LF64 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 OMA:EDAFIEE
EMBL:FP102132 Ensembl:ENSSSCT00000028847 Uniprot:I3LF64
Length = 479
Score = 191 (72.3 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A
Sbjct: 258 GKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALALFNGRWYAGRQLQCEFCPVTRWKMA 317
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C RG +CNF+H+ R
Sbjct: 318 ICGLFEIQQCPRGKHCNFLHVFR 340
Score = 35 (17.4 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 161 RSHSGHGRRYDDRDK 175
RS S GRR RD+
Sbjct: 463 RSRSRGGRRSGSRDR 477
>UNIPROTKB|G3MYL6 [details] [associations]
symbol:ZRSR2Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 EMBL:DAAA02075512
Ensembl:ENSBTAT00000066104 Uniprot:G3MYL6
Length = 439
Score = 196 (74.1 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 36/83 (43%), Positives = 51/83 (61%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + +F PVT + A
Sbjct: 238 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTQWNMA 297
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C RG YCNF+H+ R
Sbjct: 298 ICGLFEIQQCPRGKYCNFLHVFR 320
>UNIPROTKB|F1PIC2 [details] [associations]
symbol:F1PIC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 PANTHER:PTHR12620 GeneTree:ENSGT00530000063193
OMA:EDAFIEE EMBL:AAEX03026161 Ensembl:ENSCAFT00000019389
Uniprot:F1PIC2
Length = 455
Score = 192 (72.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A
Sbjct: 250 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMA 309
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E + C RG +CNF+H+ R
Sbjct: 310 ICGLFEIHQCPRGKHCNFLHVFR 332
>UNIPROTKB|F1N5D0 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 OMA:EDAFIEE
EMBL:DAAA02074879 IPI:IPI01017474 Ensembl:ENSBTAT00000027211
Uniprot:F1N5D0
Length = 474
Score = 191 (72.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A
Sbjct: 260 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMA 319
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C RG +CNF+H+ R
Sbjct: 320 ICGLFEIQQCPRGKHCNFLHVFR 342
>UNIPROTKB|Q15695 [details] [associations]
symbol:ZRSR1 "U2 small nuclear ribonucleoprotein auxiliary
factor 35 kDa subunit-related protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0030529 eggNOG:NOG304335 PANTHER:PTHR12620 UniGene:Hs.637001
HOVERGEN:HBG054605 EMBL:D49676 EMBL:U51224 EMBL:AK313576
IPI:IPI00018952 ProteinModelPortal:Q15695 SMR:Q15695 STRING:Q15695
PhosphoSite:Q15695 DMDM:2833265 PaxDb:Q15695 PRIDE:Q15695
Ensembl:ENST00000391338 UCSC:uc021ycm.1 GeneCards:GC05P112228
HGNC:HGNC:12456 HPA:HPA047500 MIM:601079 neXtProt:NX_Q15695
PharmGKB:PA37106 HOGENOM:HOG000049279 InParanoid:Q15695 OMA:HSSKSHE
OrthoDB:EOG4CNQRM PhylomeDB:Q15695 Genevestigator:Q15695
GermOnline:ENSG00000174044 Uniprot:Q15695
Length = 479
Score = 191 (72.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A
Sbjct: 256 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMA 315
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C RG +CNF+H+ R
Sbjct: 316 ICGLFEIQQCPRGKHCNFLHVFR 338
>UNIPROTKB|Q15696 [details] [associations]
symbol:ZRSR2 "U2 small nuclear ribonucleoprotein auxiliary
factor 35 kDa subunit-related protein 2" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=IDA] [GO:0005689 "U12-type spliceosomal
complex" evidence=IDA] [GO:0000245 "spliceosomal complex assembly"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IMP]
[GO:0008380 "RNA splicing" evidence=IC] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0000245 eggNOG:NOG304335
PANTHER:PTHR12620 GO:GO:0005689 GO:GO:0030628 HOVERGEN:HBG054605
HPA:HPA047500 HOGENOM:HOG000049279 OrthoDB:EOG4CNQRM EMBL:D49677
EMBL:AC004106 EMBL:AC096510 EMBL:BC113454 EMBL:BC113480
IPI:IPI00018954 RefSeq:NP_005080.1 UniGene:Hs.171909
ProteinModelPortal:Q15696 SMR:Q15696 STRING:Q15696
PhosphoSite:Q15696 DMDM:2833266 PaxDb:Q15696 PRIDE:Q15696
DNASU:8233 Ensembl:ENST00000307771 GeneID:8233 KEGG:hsa:8233
UCSC:uc004cxg.4 CTD:8233 GeneCards:GC0XP015808 H-InvDB:HIX0017758
HGNC:HGNC:23019 MIM:300028 neXtProt:NX_Q15696 PharmGKB:PA162410930
InParanoid:Q15696 OMA:EDAFIEE PhylomeDB:Q15696 ChiTaRS:ZRSR2
GenomeRNAi:8233 NextBio:30981 ArrayExpress:Q15696 Bgee:Q15696
CleanEx:HS_ZRSR2 Genevestigator:Q15696 GermOnline:ENSG00000169249
Uniprot:Q15696
Length = 482
Score = 191 (72.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A
Sbjct: 251 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMA 310
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C RG +CNF+H+ R
Sbjct: 311 ICGLFEIQQCPRGKHCNFLHVFR 333
>UNIPROTKB|I3LMZ7 [details] [associations]
symbol:LOC100624937 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 EMBL:FP565155
Ensembl:ENSSSCT00000024533 OMA:VEREACS Uniprot:I3LMZ7
Length = 385
Score = 188 (71.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + + PVT ++ A
Sbjct: 212 GKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEICPVTQWKMA 271
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C RG +CNF+H+ R
Sbjct: 272 ICGLFEIQQCPRGKHCNFLHVFR 294
>MGI|MGI:98885 [details] [associations]
symbol:Zrsr1 "zinc finger (CCCH type), RNA binding motif and
serine/arginine rich 1" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 MGI:MGI:98885 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 eggNOG:NOG304335 PANTHER:PTHR12620
CleanEx:MM_SP2 HOVERGEN:HBG054605 HOGENOM:HOG000049279
OrthoDB:EOG4CNQRM EMBL:D17407 EMBL:S69507 EMBL:D26474
IPI:IPI00137872 PIR:S41485 RefSeq:NP_035793.1 UniGene:Mm.29542
ProteinModelPortal:Q64707 SMR:Q64707 PhosphoSite:Q64707
PRIDE:Q64707 Ensembl:ENSMUST00000049506 GeneID:22183 KEGG:mmu:22183
CTD:7310 InParanoid:Q64707 OMA:AENERIW NextBio:302139 Bgee:Q64707
Genevestigator:Q64707 GermOnline:ENSMUSG00000044068 Uniprot:Q64707
Length = 428
Score = 189 (71.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A
Sbjct: 242 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKVA 301
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C +G +CNF+H+ R
Sbjct: 302 ICGLFEMQKCPKGKHCNFLHVFR 324
>RGD|1561824 [details] [associations]
symbol:Zrsr1 "zinc finger (CCCH type), RNA binding motif and
serine/arginine rich 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 RGD:1561824 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:NOG304335 PANTHER:PTHR12620 GeneTree:ENSGT00530000063193
HOVERGEN:HBG054605 HOGENOM:HOG000049279 OrthoDB:EOG4CNQRM CTD:7310
OMA:EDAFIEE EMBL:BC086322 IPI:IPI00205826 RefSeq:NP_001017504.1
UniGene:Rn.204453 Ensembl:ENSRNOT00000012767 GeneID:498425
KEGG:rno:498425 UCSC:RGD:1561824 InParanoid:Q5RK33 NextBio:699756
Genevestigator:Q5RK33 Uniprot:Q5RK33
Length = 428
Score = 189 (71.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE+ AL +GR+YAGR + +F PVT ++ A
Sbjct: 243 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKVA 302
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C +G +CNF+H+ R
Sbjct: 303 ICGLFEMQKCPKGKHCNFLHVFR 325
>MGI|MGI:103287 [details] [associations]
symbol:Zrsr2 "zinc finger (CCCH type), RNA binding motif and
serine/arginine rich 2" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0030628 "pre-mRNA
3'-splice site binding" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
MGI:MGI:103287 GO:GO:0005730 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0000245 eggNOG:NOG304335
PANTHER:PTHR12620 GO:GO:0005689 GO:GO:0030628 HOVERGEN:HBG054605
HOGENOM:HOG000049279 ChiTaRS:ZRSR2 EMBL:D45205 IPI:IPI00828580
PIR:A57120 UniGene:Mm.426178 ProteinModelPortal:Q62377 SMR:Q62377
PhosphoSite:Q62377 PRIDE:Q62377 NextBio:302143
Genevestigator:Q62377 GermOnline:ENSMUSG00000031370 Uniprot:Q62377
Length = 462
Score = 186 (70.5 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A
Sbjct: 255 GKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMA 314
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C RG +CNF+H+ R
Sbjct: 315 ICGLFEVQQCPRGKHCNFLHVFR 337
>RGD|1559763 [details] [associations]
symbol:Zrsr2 "zinc finger (CCCH type), RNA binding motif and
serine/arginine rich 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000245
"spliceosomal complex assembly" evidence=ISO] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=ISO] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
RGD:1559763 GO:GO:0005730 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003723 PANTHER:PTHR12620
GeneTree:ENSGT00530000063193 OrthoDB:EOG4CNQRM CTD:8233
IPI:IPI00358500 RefSeq:XP_001067753.2 RefSeq:XP_217612.5
UniGene:Rn.26786 Ensembl:ENSRNOT00000045300 GeneID:302670
KEGG:rno:302670 UCSC:RGD:1559763 NextBio:649974 Uniprot:D3ZHQ8
Length = 541
Score = 186 (70.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + NL H+ GNVYVQ++ EE A +GR+YAGR + +F PVT ++ A
Sbjct: 251 GKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMA 310
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C +E C RG +CNF+H+ R
Sbjct: 311 ICGLFEVQQCPRGKHCNFLHVFR 333
>ZFIN|ZDB-GENE-030131-1495 [details] [associations]
symbol:zrsr2 "zinc finger (CCCH type), RNA-binding
motif and serine/arginine rich 2" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
ZFIN:ZDB-GENE-030131-1495 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 PANTHER:PTHR12620
GeneTree:ENSGT00530000063193 CTD:8233 EMBL:CR848805 IPI:IPI00899441
RefSeq:XP_001920562.1 UniGene:Dr.116918 UniGene:Dr.77318
Ensembl:ENSDART00000081319 GeneID:100005490 KEGG:dre:100005490
NextBio:20786710 Uniprot:E7F2A1
Length = 635
Score = 187 (70.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 33/83 (39%), Positives = 49/83 (59%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G + + N H+ GNVYVQ+ EEQ A +GR+YAGR + +FSPVT ++ A
Sbjct: 264 GRVVQFKVSCNFEPHLRGNVYVQYETEEQCKEAFVMFNGRWYAGRQLQCEFSPVTRWKTA 323
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C ++ C +G +CNF+H+ R
Sbjct: 324 ICGLFDRRKCPKGKHCNFLHVFR 346
>UNIPROTKB|F1NHR6 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 PANTHER:PTHR12620 GeneTree:ENSGT00530000063193
OMA:EDAFIEE EMBL:AADN02011332 IPI:IPI00585296
Ensembl:ENSGALT00000026711 Uniprot:F1NHR6
Length = 459
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G++ + N H+ GNVYVQ++ E+ AL SGR+YAGR + +F PVT ++ A
Sbjct: 238 GKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTA 297
Query: 103 TCRQYEENTCNRGGYCNFMHL 123
C +E C RG +CNF+H+
Sbjct: 298 ICGLFERQKCPRGKHCNFLHV 318
>TAIR|locus:2012843 [details] [associations]
symbol:AT1G10320 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR003954 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00361 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AC005489 EMBL:AK226684 IPI:IPI00524917 RefSeq:NP_172503.1
UniGene:At.51551 HSSP:Q01081 ProteinModelPortal:Q9SY74 SMR:Q9SY74
PRIDE:Q9SY74 EnsemblPlants:AT1G10320.1 GeneID:837571
KEGG:ath:AT1G10320 GeneFarm:4542 TAIR:At1g10320 eggNOG:NOG304335
HOGENOM:HOG000083070 InParanoid:Q9SY74 OMA:CSRKHVY PhylomeDB:Q9SY74
ProtClustDB:CLSN2679568 Genevestigator:Q9SY74 PANTHER:PTHR12620
Uniprot:Q9SY74
Length = 757
Score = 186 (70.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 34/88 (38%), Positives = 57/88 (64%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
KYGE+ + +C N + H+ GNVYV +R E A A +S++GR++AG+ + +F ++ ++
Sbjct: 317 KYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWK 376
Query: 101 EATCRQYEEN---TCNRGGYCNFMHLKR 125
A C +Y ++ TC+RG CNF+H R
Sbjct: 377 VAICGEYMKSRLKTCSRGSACNFIHCFR 404
>CGD|CAL0000603 [details] [associations]
symbol:orf19.53 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0000243 "commitment complex"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 PRINTS:PR01848
PROSITE:PS50103 SMART:SM00356 CGD:CAL0000603 GO:GO:0005634
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 EMBL:AACQ01000232 EMBL:AACQ01000231
eggNOG:NOG323920 RefSeq:XP_710852.1 RefSeq:XP_710864.1
ProteinModelPortal:Q59MA7 GeneID:3647530 GeneID:3647542
KEGG:cal:CaO19.53 KEGG:cal:CaO19.7714 Uniprot:Q59MA7
Length = 377
Score = 174 (66.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 11 GVDAQGNPLDPRKIQXXXXXXXXXXXXXXNKYGEIESLNICDNLADHMVGNVYVQFREEE 70
G+D L +IQ K G+I + +C+N +H+ G+VY++F +
Sbjct: 201 GLDENHPVLTDEQIQKDFDLFYQDIFVHVAKLGQINDMAVCEN-ENHLSGHVYIKFNDYN 259
Query: 71 QAARALKSLSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKR 125
A A L+ +Y G+P+ + SPV +A C+ ++ C+RG CN++H+K+
Sbjct: 260 DAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQ 314
>UNIPROTKB|F1PT19 [details] [associations]
symbol:F1PT19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 PANTHER:PTHR12620 GeneTree:ENSGT00530000063193
EMBL:AAEX03012736 EMBL:AAEX03012735 Ensembl:ENSCAFT00000038958
OMA:REXLENG Uniprot:F1PT19
Length = 430
Score = 167 (63.8 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 43 GEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFREA 102
G + + NL H+ GNVYVQ+R E + AL +GR+YAGR + + PVT ++ A
Sbjct: 251 GTVVQFKVSRNLEPHLRGNVYVQYRSEAECRAALSLFNGRWYAGRRLQCELCPVTRWKAA 310
Query: 103 TCRQYEENTCNRGGYCNFMHLKR 125
C E C RG CNF+H+ R
Sbjct: 311 ICG-CELRRCPRGRRCNFLHVFR 332
>FB|FBgn0031628 [details] [associations]
symbol:CG3294 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0042060 "wound healing" evidence=IMP]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00360 EMBL:AE014134 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0042060 GO:GO:0000398 PANTHER:PTHR12620
GeneTree:ENSGT00530000063193 UniGene:Dm.11865 GeneID:33677
KEGG:dme:Dmel_CG3294 FlyBase:FBgn0031628 GenomeRNAi:33677
NextBio:784734 RefSeq:NP_608857.2 ProteinModelPortal:Q9VR26
SMR:Q9VR26 IntAct:Q9VR26 MINT:MINT-825396 STRING:Q9VR26
EnsemblMetazoa:FBtr0077381 UCSC:CG3294-RA InParanoid:Q9VR26
OMA:HKEYASA PhylomeDB:Q9VR26 ArrayExpress:Q9VR26 Bgee:Q9VR26
Uniprot:Q9VR26
Length = 456
Score = 149 (57.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 41 KYGEIESLNICDNLADHMVGNVYVQFREEEQAARALKSLSGRFYAGRPIIVDFSPVTDFR 100
K+G I + N +H+ G+V+V++ E A RA +L GR+YA + + V+FS + +R
Sbjct: 249 KFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQGRYYASKRLNVEFSNLRTWR 308
Query: 101 EATCRQYEENTCNRGGYCNFMHL 123
A C C +G C ++HL
Sbjct: 309 GAVCGLSLTRKCPKGNDCGYLHL 331
Score = 39 (18.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 161 RSHSGHGRRYDDR 173
R HS G +DDR
Sbjct: 422 REHSSSGSSHDDR 434
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 272 174 0.00075 109 3 11 22 0.44 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 42
No. of states in DFA: 593 (63 KB)
Total size of DFA: 172 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.08u 0.13s 13.21t Elapsed: 00:00:01
Total cpu time: 13.08u 0.13s 13.21t Elapsed: 00:00:01
Start: Sat May 11 10:39:29 2013 End: Sat May 11 10:39:30 2013