BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024095
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY +LG+ +ATPE+IKKAY + HPD++ DDP INE Y VLSDP +R
Sbjct: 4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRA 63
Query: 131 VYDEI 135
YD+
Sbjct: 64 RYDQF 68
>sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=CAJ1 PE=1 SV=1
Length = 391
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 19/174 (10%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
+YY +LG+ P+ATP +IKKAY HPD DDP+ + E Y VLSDP R
Sbjct: 6 EYYDILGIKPEATPTEIKKAYRRKAMETHPDKHPDDPDAQAKFQAVGEAYQVLSDPGLRS 65
Query: 131 VYDEIHGYSLIATNPFLDDSCPKDHVF--------VDEFSCIGCKNCNNVAPEVFKIEED 182
YD+ + F D S +F + EFS K N A E+F E++
Sbjct: 66 KYDQFGKEDAVPQQGFEDASEYFTAIFGGDGFKDWIGEFSLF--KELNE-ATEMFGKEDE 122
Query: 183 FGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLSLLEDEMRRVERVNVAMM 236
G A ++A ES + + + SL +D++ + +R + M
Sbjct: 123 EGTAATE--------TEKADESTDGGMVKHDTNKAESLKKDKLSKEQREKLMEM 168
>sp|Q67S53|DNAJ_SYMTH Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T /
IAM 14863) GN=dnaJ PE=3 SV=1
Length = 386
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY +LG+ +AT +IKKA+ N + HPD + DDP+ INE Y VLSDP +R
Sbjct: 8 DYYEILGVPRNATEAEIKKAFRNLARKYHPDANKDDPDAAEKFKEINEAYQVLSDPEKRA 67
Query: 131 VYDEI 135
YD+
Sbjct: 68 RYDQF 72
>sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mitochondrial OS=Homo sapiens
GN=DNAJA3 PE=1 SV=2
Length = 480
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 15 KLQNPSLNSFSSRSSSRLLANNSSSLSLMGHSSKRRSCGRARVTAEDSASTDAIADDYYA 74
KL P+ S + R L +SL G C TA S +DYY
Sbjct: 42 KLSVPAFASSLTSCGPRALLTLRPGVSLTGTKHNPFIC-----TASFHTSAPLAKEDYYQ 96
Query: 75 VLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYD 133
+LG+ +A+ ++IKKAYY K HPD + DDP+ + E Y VLSD V+R YD
Sbjct: 97 ILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYD 155
>sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2
SV=2
Length = 398
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
+YY VLG+ P AT +IKKAYY + HPD + +DP+ + + E Y VLSD QR
Sbjct: 6 EYYDVLGVSPTATESEIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDSGQRQ 65
Query: 131 VYDEIHGYSLIATNPFLD 148
YD G S I+T+ +D
Sbjct: 66 AYDAC-GKSGISTDAIID 82
>sp|Q24331|TID_DROVI Protein tumorous imaginal discs, mitochondrial OS=Drosophila
virilis GN=l(2)tid PE=2 SV=1
Length = 529
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQ 128
A DYYA LG+ +A + IKKAYY K HPD + DDP+ + ++E Y VLSD +
Sbjct: 78 AKDYYATLGVAKNANAKDIKKAYYELAKKYHPDTNKDDPDASKKFQDVSEAYEVLSDDQK 137
Query: 129 RMVYD 133
R YD
Sbjct: 138 RREYD 142
>sp|Q27237|TID_DROME Protein tumorous imaginal discs, mitochondrial OS=Drosophila
melanogaster GN=l(2)tid PE=1 SV=2
Length = 520
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 64 STDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVL 123
+ D +A DYYA LG+ +A + IKKAYY K HPD + +DP+ ++E Y VL
Sbjct: 58 TRDLLAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVL 117
Query: 124 SDPVQRMVYD 133
SD +R YD
Sbjct: 118 SDEQKRREYD 127
>sp|Q56237|DNAJ2_THET8 Chaperone protein DnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=dnaJ2 PE=3 SV=2
Length = 280
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDP 126
A DYYA+LG+ +AT E+IK+AY + HPD++ PE INE YAVLSDP
Sbjct: 2 AAKKDYYAILGVPRNATQEEIKRAYKRLARQYHPDVN-KSPEAEEKFKEINEAYAVLSDP 60
Query: 127 VQRMVYD 133
+R +YD
Sbjct: 61 EKRRIYD 67
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDP 126
A + DYY +LG+ DA ++IKKAY + HPD++ DDP+ I+E Y +LSDP
Sbjct: 2 ATSKDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDP 61
Query: 127 VQRMVYDEIHGYSLIATNPF 146
+R YD+ +G++ I F
Sbjct: 62 DKRARYDQ-YGHAGINEEDF 80
>sp|Q82BY4|DNAJ2_STRAW Chaperone protein DnaJ 2 OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=dnaJ2 PE=3 SV=1
Length = 378
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPV 127
+A DYYAVLG+ DA+ ++IKKA+ + HPD++ DP+T IN Y VLSDP
Sbjct: 1 MATDYYAVLGVRRDASQDEIKKAFRRLARELHPDVN-PDPKTQERFKEINAAYEVLSDPQ 59
Query: 128 QRMVYD 133
++ VYD
Sbjct: 60 KKQVYD 65
>sp|Q9RDD7|DNAJ2_STRCO Chaperone protein DnaJ 2 OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=dnaJ2 PE=3 SV=1
Length = 378
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPV 127
+A DYYAVLG+ DA+ ++IKKA+ + HPD++ DP+T IN Y VLSDP
Sbjct: 1 MATDYYAVLGVRRDASQDEIKKAFRRLARELHPDVN-PDPKTQERFKEINAAYEVLSDPQ 59
Query: 128 QRMVYD 133
++ VYD
Sbjct: 60 KKQVYD 65
>sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus
GN=Dnaja3 PE=1 SV=1
Length = 480
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQR 129
DDYY +LG+ +A+ + IKKAYY K HPD + DDP+ + E Y VLSD V+R
Sbjct: 92 DDYYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKR 151
Query: 130 MVYD 133
YD
Sbjct: 152 KQYD 155
>sp|Q5SLW9|DNAJ1_THET8 Chaperone protein DnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=dnaJ1 PE=3 SV=1
Length = 350
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 39/66 (59%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYYA+LG+ +A+ E+IKKAY HPD + D E INE YAVLSDP +R
Sbjct: 3 DYYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDKEAEERFKEINEAYAVLSDPKKRA 62
Query: 131 VYDEIH 136
YD H
Sbjct: 63 AYDRGH 68
>sp|Q72GN6|DNAJ_THET2 Chaperone protein DnaJ OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1
Length = 350
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 39/66 (59%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYYA+LG+ +A+ E+IKKAY HPD + D E INE YAVLSDP +R
Sbjct: 3 DYYAILGVSREASQEEIKKAYRRLALKYHPDRNPGDKEAEERFKEINEAYAVLSDPKKRA 62
Query: 131 VYDEIH 136
YD H
Sbjct: 63 AYDRGH 68
>sp|O52164|DNAJ2_STRAL Chaperone protein DnaJ 2 OS=Streptomyces albus G GN=dnaJ2 PE=3 SV=1
Length = 379
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPV 127
+A DYYAVLG+ DA+ ++IKKA+ + HPD++ DP+T IN Y VLSDP
Sbjct: 1 MATDYYAVLGVRRDASQDEIKKAFRRLARELHPDVN-PDPKTQERFKEINAAYEVLSDPQ 59
Query: 128 QRMVYD 133
++ VYD
Sbjct: 60 KKQVYD 65
>sp|Q75VW3|DNAJ_HYDTT Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM
6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1
Length = 356
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY +LG+ DAT E+IKKAY K HPD+S D+ + F INE Y +LSD +R
Sbjct: 5 DYYQILGVSKDATAEEIKKAYRRLAKEYHPDISADENASEKF-KEINEAYHILSDEERRK 63
Query: 131 VYDEI 135
YD I
Sbjct: 64 EYDRI 68
>sp|Q73T77|DNAJ2_MYCPA Chaperone protein DnaJ 2 OS=Mycobacterium paratuberculosis (strain
ATCC BAA-968 / K-10) GN=dnaJ2 PE=3 SV=1
Length = 392
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 63 ASTDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAV 122
A + + D+Y LG+ DA+PE+IK+AY + HPD + D+P ++E + V
Sbjct: 2 AQREWVEKDFYKELGVSSDASPEEIKRAYRKLARDLHPDANPDNPAAGERFKAVSEAHNV 61
Query: 123 LSDPVQRMVYDEIH 136
LSDP +R YDE
Sbjct: 62 LSDPAKRKEYDETR 75
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC
BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDP 126
A DYY +LG+ +AT E+IK+AY K HPD + + E INE Y VLSDP
Sbjct: 2 AQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDP 61
Query: 127 VQRMVYDEI 135
+R +YD+
Sbjct: 62 EKRKLYDQF 70
>sp|Q02605|DNAJ1_MYCLE Chaperone protein DnaJ 1 OS=Mycobacterium leprae (strain TN)
GN=dnaJ1 PE=3 SV=2
Length = 388
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 63 ASTDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAV 122
A + + D+Y LG+ DA+PE+IK+AY + HPD + D+ F + ++E + V
Sbjct: 2 AQREWVEKDFYKELGVSSDASPEEIKRAYRKLARYLHPDANPDNSAGERFKV-VSEAHNV 60
Query: 123 LSDPVQRMVYDEIH 136
LSDPV+R YDE
Sbjct: 61 LSDPVKRKEYDETR 74
>sp|A4XKA5|DNAJ_CALS8 Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1
Length = 387
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%)
Query: 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDP 126
A DYY +LG+ +AT E+IK+AY K HPD + + E INE Y VLSDP
Sbjct: 2 AQKKDYYEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDP 61
Query: 127 VQRMVYDEI 135
+R YD+
Sbjct: 62 EKRRKYDQF 70
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=dnaJ PE=3
SV=1
Length = 384
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
D Y +LG+ +A+ E+IKKAY K HPDL+ D E INE Y +LSDP +R
Sbjct: 5 DLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRA 64
Query: 131 VYDEI 135
YD+
Sbjct: 65 QYDQF 69
>sp|Q9UXR9|DNAJ_METTE Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3
SV=1
Length = 387
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDP 126
A DYY +LGL DATPE IKK+Y HPD + +P I+E YAVLSDP
Sbjct: 2 ATTRDYYEILGLSRDATPEDIKKSYRKLALKYHPDRN-KEPGAEEKFKEISEAYAVLSDP 60
Query: 127 VQRMVYDEI 135
+R YD
Sbjct: 61 EKRAQYDRF 69
>sp|P0A548|DNAJ1_MYCTU Chaperone protein DnaJ 1 OS=Mycobacterium tuberculosis GN=dnaJ1
PE=3 SV=1
Length = 395
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 63 ASTDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAV 122
A + + D+Y LG+ DA+PE+IK+AY + HPD + +P ++E + V
Sbjct: 2 AQREWVEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNV 61
Query: 123 LSDPVQRMVYDEIH 136
LSDP +R YDE
Sbjct: 62 LSDPAKRKEYDETR 75
>sp|P0A549|DNAJ1_MYCBO Chaperone protein DnaJ 1 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=dnaJ1 PE=3 SV=1
Length = 395
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 63 ASTDAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAV 122
A + + D+Y LG+ DA+PE+IK+AY + HPD + +P ++E + V
Sbjct: 2 AQREWVEKDFYQELGVSSDASPEEIKRAYRKLARDLHPDANPGNPAAGERFKAVSEAHNV 61
Query: 123 LSDPVQRMVYDEIH 136
LSDP +R YDE
Sbjct: 62 LSDPAKRKEYDETR 75
>sp|Q2S030|DNAJ_SALRD Chaperone protein DnaJ OS=Salinibacter ruber (strain DSM 13855 /
M31) GN=dnaJ PE=3 SV=1
Length = 388
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY +LG+ DA+ ++IKKAY HPD + DDPE +E Y VLSDP +R
Sbjct: 4 DYYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDPEAEQKFKEASEAYEVLSDPEKRQ 63
Query: 131 VYDEI 135
YD+
Sbjct: 64 RYDQF 68
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1
SV=1
Length = 397
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 72 YYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMV 131
YY +LG+ P A+PE+IKKAY HPD + D+ E I++ Y VLSDP +R V
Sbjct: 7 YYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFK---LISQAYEVLSDPKKRDV 63
Query: 132 YDE 134
YD+
Sbjct: 64 YDQ 66
>sp|Q97BG9|DNAJ_THEVO Chaperone protein DnaJ OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=dnaJ PE=3
SV=1
Length = 365
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDP 126
+A DYY +LG+ +A+ E IKKA+ K HPDL D+ E I+E Y VLSDP
Sbjct: 1 MAKDYYKILGVDRNASEEDIKKAFRELAKKWHPDLHPDNKAEAEEKFKEISEAYEVLSDP 60
Query: 127 VQRMVYDE 134
+R +YD+
Sbjct: 61 EKRRIYDQ 68
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2
SV=1
Length = 397
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 72 YYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMV 131
YY +LG+ P A+PE+IKKAY HPD + D+ E I++ Y VLSDP +R +
Sbjct: 7 YYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFK---LISQAYEVLSDPKKRDI 63
Query: 132 YDE 134
YD+
Sbjct: 64 YDQ 66
>sp|Q9HJ83|DNAJ_THEAC Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDP 126
+A DYY +LG+ +AT E+IKKA+ K HPDL ++ E I+E Y VLSDP
Sbjct: 1 MAKDYYKILGVDRNATDEEIKKAFRELAKKWHPDLHPENKQEAEEKFKEISEAYEVLSDP 60
Query: 127 VQRMVYDE 134
+R +YD+
Sbjct: 61 QKRRMYDQ 68
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY +LG+ +AT ++IK+AY ++ HPDL+ DP INE Y VLSDP +R
Sbjct: 6 DYYEILGVPRNATQDEIKQAYRRLVRQYHPDLN-KDPSAHEKFKEINEAYEVLSDPQKRA 64
Query: 131 VYDEI 135
YD+
Sbjct: 65 QYDQF 69
>sp|Q21H37|DNAJ_SACD2 Chaperone protein DnaJ OS=Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024) GN=dnaJ PE=3 SV=1
Length = 374
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ D +P+++KKAY HPD + DDP + + +E Y VLSD +R
Sbjct: 5 DYYEVLGVSKDVSPQELKKAYRKVAMKYHPDRNSDDPNSEDKFKEASEAYEVLSDAQKRA 64
Query: 131 VYDE 134
YD+
Sbjct: 65 AYDQ 68
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3
SV=1
Length = 369
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQR 129
DYY +LG+ DAT E+IK+AY +K HPD ++ E I E Y VLSDP +R
Sbjct: 7 DYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKR 66
Query: 130 MVYD------EIHGYSLIATNPFLDD 149
+YD E Y + F DD
Sbjct: 67 AMYDRFGYVGEQPTYQETESGGFFDD 92
>sp|P56101|CSP_TORCA Cysteine string protein OS=Torpedo californica PE=1 SV=1
Length = 195
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQ 128
D Y VLGL +A+PE IKK+Y HPD + D+PE + IN +A+L+D +
Sbjct: 13 GDSLYIVLGLDKNASPEDIKKSYRKLALKYHPDKNPDNPEASEKFKEINNAHAILTDATK 72
Query: 129 RMVYDEIHGYSLIATNPFLDDSC 151
R +YD+ L F +++
Sbjct: 73 RNIYDKYGSLGLYVAEQFGEENV 95
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQR 129
DYY +LG+ DAT E+IK+AY +K HPD ++ E I E Y VLSDP +R
Sbjct: 7 DYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKR 66
Query: 130 MVYD------EIHGYSLIATNPFLDD 149
+YD E Y + F DD
Sbjct: 67 AMYDRFGYVGEQPTYQETESGGFFDD 92
>sp|Q1H3B9|DNAJ_METFK Chaperone protein DnaJ OS=Methylobacillus flagellatus (strain KT /
ATCC 51484 / DSM 6875) GN=dnaJ PE=3 SV=1
Length = 373
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ DAT E+IKKAY HPD + D+P+ E Y VLSD +R
Sbjct: 5 DYYEVLGVNRDATDEEIKKAYRKLAMKYHPDRNPDNPKAEEHFKEAKEAYEVLSDDQKRA 64
Query: 131 VYDEIHGYSLIATNP 145
YD+ Y +P
Sbjct: 65 AYDQ---YGHAGVDP 76
>sp|Q5LWJ5|DNAJ_RUEPO Chaperone protein DnaJ OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=dnaJ PE=3 SV=1
Length = 381
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ A+ ++IKKAY K HPD + D+P+ + +NE Y VL D ++
Sbjct: 5 DYYDVLGVSKGASADEIKKAYRGKAKELHPDRNKDNPDAESLFKEVNEAYEVLKDAEKKA 64
Query: 131 VYD 133
YD
Sbjct: 65 AYD 67
>sp|P47442|DNAJM_MYCGE DnaJ-like protein MG200 OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=MG200 PE=1 SV=1
Length = 601
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ PDA +IKKA+ K HPD + P+ INE VLS+P +R
Sbjct: 7 DYYEVLGITPDADQSEIKKAFRKLAKKYHPD-RNNAPDAAKIFAEINEANDVLSNPKKRA 65
Query: 131 VYDEIHGYSLIATNPFLDDSCPKDHVFVDEFSCIGCKNCNNVAPE 175
YD+ +G+ + P + F +E + G N N PE
Sbjct: 66 NYDK-YGFDGVDGEPAFNFQADVFQSFFEEIAKSGVFN-NQTNPE 108
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) GN=dnaJ2
PE=3 SV=1
Length = 376
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY +LG+ +A+ E+IKKAY ++ HPD+ PE INE Y VLSDP +R
Sbjct: 8 DYYEILGVPRNASQEEIKKAYRRLVRKYHPDIC-KKPECEEKFKEINEAYQVLSDPEKRK 66
Query: 131 VYDEIHGYS 139
+YD ++G++
Sbjct: 67 LYD-MYGHA 74
>sp|Q5L6F7|DNAJ_CHLAB Chaperone protein DnaJ OS=Chlamydophila abortus (strain S26/3)
GN=dnaJ PE=3 SV=1
Length = 391
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ A+PE+IKK+Y HPD + D E ++E Y VLSDP +R
Sbjct: 2 DYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRE 61
Query: 131 VYD 133
YD
Sbjct: 62 SYD 64
>sp|Q835R5|DNAJ_ENTFA Chaperone protein DnaJ OS=Enterococcus faecalis (strain ATCC 700802
/ V583) GN=dnaJ PE=3 SV=1
Length = 389
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDP 126
A DYY VLGL A+ ++IKKAY K HPD++ + F ++E Y VLSDP
Sbjct: 2 ATKRDYYEVLGLAKGASDDEIKKAYRKLSKKYHPDINKEADAEEKF-KEVSEAYEVLSDP 60
Query: 127 VQRMVYDEIHGYSLIATNP 145
++ YD+ Y T+P
Sbjct: 61 QKKAAYDQ---YGHAGTDP 76
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY +LG+ A+ +IKKAY K HPD++ D INE Y VLSDP +R
Sbjct: 6 DYYEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRA 65
Query: 131 VYDEIHGYSLIATN 144
YD+ G+S N
Sbjct: 66 RYDQF-GHSAFDPN 78
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein DnaJ OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1
Length = 369
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQR 129
DYY +LG+ DAT E+IK+AY +K HPD ++ E I E Y VLSDP +R
Sbjct: 7 DYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKR 66
Query: 130 MVYDEIHGY 138
+YD GY
Sbjct: 67 AMYDRF-GY 74
>sp|Q6L0S6|DNAJ_PICTO Chaperone protein DnaJ OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=dnaJ PE=3 SV=1
Length = 357
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPV 127
+A DYYA+LG+ +A+ + IKKA+ K HPD + + E I E Y VLSDP
Sbjct: 1 MAKDYYAILGVDRNASQDDIKKAFRELAKKYHPDANPGNKEAEEKFKEIAEAYEVLSDPQ 60
Query: 128 QRMVYDE 134
+R YDE
Sbjct: 61 KRKQYDE 67
>sp|Q823T2|DNAJ_CHLCV Chaperone protein DnaJ OS=Chlamydophila caviae (strain GPIC)
GN=dnaJ PE=3 SV=1
Length = 392
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ A+PE+IKK+Y HPD + D E ++E Y VLSDP +R
Sbjct: 2 DYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRE 61
Query: 131 VYD 133
YD
Sbjct: 62 SYD 64
>sp|P25303|SCJ1_YEAST DnaJ-related protein SCJ1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SCJ1 PE=1 SV=2
Length = 377
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQ 128
A DYYA+L + DAT ++IK AY K HPD + E + + E Y VLSDP +
Sbjct: 21 AQDYYAILEIDKDATEKEIKSAYRQLSKKYHPDKNAGSEEAHQKFIEVGEAYDVLSDPEK 80
Query: 129 RMVYDEI 135
+ +YD+
Sbjct: 81 KKIYDQF 87
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC 49049
/ DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQR 129
DYY +LG+ +AT E+I+KAY +K HPD ++ E I E Y VLSDP +R
Sbjct: 7 DYYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKR 66
Query: 130 MVYDEIHGYSLIATNPFLDDSCPKDHVFVDEF 161
+YD + + P ++ F D F
Sbjct: 67 AMYDR---FGYVGEQPVYQEAETGGSFFEDVF 95
>sp|Q6YPM2|DNAJ_ONYPE Chaperone protein DnaJ OS=Onion yellows phytoplasma (strain OY-M)
GN=dnaJ PE=3 SV=1
Length = 257
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY +LGL DA+PE IKKAY + K HPD+S + F + E Y+VL D ++
Sbjct: 5 DYYHILGLDKDASPEDIKKAYRSLAKKYHPDISKEANAENKF-KEVQEAYSVLGDASKKS 63
Query: 131 VYD 133
YD
Sbjct: 64 NYD 66
>sp|A1JJD6|DNAJ_YERE8 Chaperone protein DnaJ OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=dnaJ PE=3 SV=1
Length = 376
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ DA +IKKAY HPD + D+ +T + E Y +L+DP +R
Sbjct: 5 DYYEVLGVKKDADEREIKKAYKRLAVKYHPDRNQDENDTGENFKEVKEAYEILTDPQKRA 64
Query: 131 VYDE 134
YD+
Sbjct: 65 AYDQ 68
>sp|A8LQ63|DNAJ_DINSH Chaperone protein DnaJ OS=Dinoroseobacter shibae (strain DFL 12)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ A+P++IKK + K HPD + D+P NE Y +L DP ++
Sbjct: 5 DYYDVLGVSKGASPDEIKKGFRKKAKELHPDRNSDNPNAEAQFKEANEAYDILKDPDKKA 64
Query: 131 VYD 133
YD
Sbjct: 65 AYD 67
>sp|Q182E7|DNAJ_CLOD6 Chaperone protein DnaJ OS=Clostridium difficile (strain 630)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 34/65 (52%)
Query: 71 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRM 130
DYY VLG+ A ++IKKAY HPD + D E INE Y VLSD +R
Sbjct: 6 DYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRK 65
Query: 131 VYDEI 135
YD+
Sbjct: 66 TYDQF 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,555,003
Number of Sequences: 539616
Number of extensions: 3644336
Number of successful extensions: 12404
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 11146
Number of HSP's gapped (non-prelim): 1166
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)