Query 024096
Match_columns 272
No_of_seqs 239 out of 3289
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 18:09:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024096.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024096hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 100.0 1.7E-42 5.8E-47 298.2 30.3 248 1-252 39-302 (302)
2 1kpg_A CFA synthase;, cyclopro 100.0 5.6E-40 1.9E-44 280.4 28.5 248 1-252 31-287 (287)
3 2fk8_A Methoxy mycolic acid sy 100.0 4.1E-38 1.4E-42 272.7 28.3 251 1-255 57-316 (318)
4 3bus_A REBM, methyltransferase 100.0 5.2E-32 1.8E-36 229.2 26.7 243 3-253 28-273 (273)
5 2o57_A Putative sarcosine dime 100.0 7.2E-30 2.5E-34 218.7 29.8 245 3-255 45-296 (297)
6 3ujc_A Phosphoethanolamine N-m 100.0 9.4E-28 3.2E-32 201.8 22.3 221 19-253 40-266 (266)
7 3vc1_A Geranyl diphosphate 2-C 100.0 6.5E-27 2.2E-31 201.9 21.3 222 2-252 88-311 (312)
8 3kkz_A Uncharacterized protein 99.9 1.8E-25 6.3E-30 188.5 16.2 213 23-253 34-257 (267)
9 3bkx_A SAM-dependent methyltra 99.9 1.3E-25 4.5E-30 190.0 14.4 238 3-251 9-274 (275)
10 1nkv_A Hypothetical protein YJ 99.9 3.8E-23 1.3E-27 173.0 22.0 165 21-193 23-188 (256)
11 3f4k_A Putative methyltransfer 99.9 1.4E-22 4.9E-27 169.5 23.5 163 22-193 33-197 (257)
12 4htf_A S-adenosylmethionine-de 99.9 1.2E-23 4E-28 179.0 14.1 215 23-256 58-282 (285)
13 1vl5_A Unknown conserved prote 99.9 5.2E-23 1.8E-27 172.7 16.1 185 14-207 17-203 (260)
14 3mgg_A Methyltransferase; NYSG 99.9 7.4E-23 2.5E-27 173.2 15.2 188 2-193 5-199 (276)
15 3dli_A Methyltransferase; PSI- 99.9 6.6E-24 2.3E-28 176.2 8.2 169 32-220 39-222 (240)
16 4gek_A TRNA (CMO5U34)-methyltr 99.9 7.3E-22 2.5E-26 165.9 17.4 114 32-146 68-184 (261)
17 1xxl_A YCGJ protein; structura 99.9 9.8E-22 3.3E-26 163.0 16.4 181 19-208 6-188 (239)
18 1pjz_A Thiopurine S-methyltran 99.9 5.9E-21 2E-25 154.6 16.1 154 23-193 11-177 (203)
19 3dtn_A Putative methyltransfer 99.9 1E-20 3.5E-25 156.1 16.0 164 24-191 33-213 (234)
20 3dh0_A SAM dependent methyltra 99.9 3.2E-20 1.1E-24 151.5 17.8 155 23-194 26-183 (219)
21 3lcc_A Putative methyl chlorid 99.9 1.2E-20 4.1E-25 155.9 15.4 153 24-194 57-209 (235)
22 3dlc_A Putative S-adenosyl-L-m 99.8 1.9E-21 6.5E-26 158.4 9.6 120 21-143 31-151 (219)
23 3jwg_A HEN1, methyltransferase 99.8 1.1E-20 3.8E-25 154.4 14.1 125 15-139 10-140 (219)
24 3hnr_A Probable methyltransfer 99.8 1E-20 3.5E-25 154.5 13.5 161 24-193 35-202 (220)
25 3ou2_A SAM-dependent methyltra 99.8 2.3E-20 7.7E-25 152.1 15.4 165 23-194 34-207 (218)
26 2p35_A Trans-aconitate 2-methy 99.8 3.8E-20 1.3E-24 154.8 16.9 163 19-190 18-188 (259)
27 3gwz_A MMCR; methyltransferase 99.8 1.7E-19 5.8E-24 159.0 21.5 164 23-191 191-355 (369)
28 3jwh_A HEN1; methyltransferase 99.8 1.1E-20 3.9E-25 154.2 12.8 120 21-140 16-141 (217)
29 1xtp_A LMAJ004091AAA; SGPP, st 99.8 3E-20 1E-24 155.0 15.5 165 15-193 74-239 (254)
30 3i53_A O-methyltransferase; CO 99.8 7E-20 2.4E-24 159.1 17.8 162 25-193 160-322 (332)
31 3ccf_A Cyclopropane-fatty-acyl 99.8 8.2E-20 2.8E-24 154.8 17.5 158 24-192 47-210 (279)
32 2p7i_A Hypothetical protein; p 99.8 1.1E-20 3.6E-25 156.9 11.6 182 3-193 8-200 (250)
33 1ri5_A MRNA capping enzyme; me 99.8 3.5E-19 1.2E-23 151.9 20.8 166 32-198 62-256 (298)
34 2r3s_A Uncharacterized protein 99.8 8.2E-20 2.8E-24 158.7 16.9 170 23-194 152-325 (335)
35 2yqz_A Hypothetical protein TT 99.8 1.3E-20 4.5E-25 157.9 11.2 104 31-139 36-140 (263)
36 2xvm_A Tellurite resistance pr 99.8 5.9E-19 2E-23 141.6 19.2 152 24-192 22-173 (199)
37 3mcz_A O-methyltransferase; ad 99.8 8.7E-20 3E-24 159.7 15.3 163 25-189 169-336 (352)
38 3ocj_A Putative exported prote 99.8 5.4E-20 1.9E-24 158.0 13.4 163 31-194 115-293 (305)
39 3iv6_A Putative Zn-dependent a 99.8 7.2E-20 2.5E-24 153.0 13.6 148 21-174 32-205 (261)
40 3e23_A Uncharacterized protein 99.8 1.4E-19 4.7E-24 147.0 14.0 148 23-192 34-182 (211)
41 1qzz_A RDMB, aclacinomycin-10- 99.8 3.1E-19 1.1E-23 157.4 17.2 166 24-193 172-340 (374)
42 3h2b_A SAM-dependent methyltra 99.8 2.4E-19 8.1E-24 144.7 15.1 142 35-194 42-184 (203)
43 3dp7_A SAM-dependent methyltra 99.8 1.6E-19 5.6E-24 158.7 15.0 163 27-191 172-341 (363)
44 3g2m_A PCZA361.24; SAM-depende 99.8 4.5E-20 1.5E-24 158.0 11.1 121 21-143 70-193 (299)
45 4fsd_A Arsenic methyltransfera 99.8 1.2E-19 4.2E-24 160.6 14.2 154 32-191 81-250 (383)
46 3g5l_A Putative S-adenosylmeth 99.8 2.4E-19 8.1E-24 149.7 15.0 114 23-142 33-147 (253)
47 1x19_A CRTF-related protein; m 99.8 9.3E-19 3.2E-23 153.6 19.1 167 21-193 177-349 (359)
48 2ex4_A Adrenal gland protein A 99.8 2.1E-19 7.3E-24 149.0 13.9 147 34-193 79-226 (241)
49 3l8d_A Methyltransferase; stru 99.8 1.1E-18 3.6E-23 144.5 17.8 147 33-192 52-200 (242)
50 3sm3_A SAM-dependent methyltra 99.8 4.4E-19 1.5E-23 145.9 14.5 158 33-192 29-207 (235)
51 2ip2_A Probable phenazine-spec 99.8 4.9E-19 1.7E-23 153.9 15.4 166 23-193 157-323 (334)
52 2gb4_A Thiopurine S-methyltran 99.8 9.6E-19 3.3E-23 146.1 16.5 145 31-192 65-227 (252)
53 1tw3_A COMT, carminomycin 4-O- 99.8 8.3E-19 2.8E-23 153.9 16.3 166 24-193 173-340 (360)
54 3gu3_A Methyltransferase; alph 99.8 1.4E-19 4.8E-24 153.9 10.9 117 22-142 9-128 (284)
55 3ege_A Putative methyltransfer 99.8 1.9E-19 6.5E-24 151.2 11.2 156 21-192 21-178 (261)
56 3lst_A CALO1 methyltransferase 99.8 6.7E-19 2.3E-23 153.9 14.3 162 23-191 173-335 (348)
57 1dl5_A Protein-L-isoaspartate 99.8 5.1E-20 1.8E-24 159.0 7.1 230 1-253 35-281 (317)
58 1ve3_A Hypothetical protein PH 99.8 2.5E-18 8.6E-23 140.8 16.6 123 15-142 21-144 (227)
59 4a6d_A Hydroxyindole O-methylt 99.8 1.9E-18 6.6E-23 151.3 16.4 166 24-193 169-335 (353)
60 2p8j_A S-adenosylmethionine-de 99.8 1.5E-18 5.2E-23 140.4 14.4 113 32-146 21-134 (209)
61 3pfg_A N-methyltransferase; N, 99.8 1.7E-18 5.8E-23 145.3 15.1 106 33-145 49-156 (263)
62 3m70_A Tellurite resistance pr 99.8 4.5E-18 1.5E-22 144.5 17.4 116 25-143 111-226 (286)
63 3g5t_A Trans-aconitate 3-methy 99.8 5.7E-18 2E-22 144.9 17.9 109 31-142 33-151 (299)
64 3cc8_A Putative methyltransfer 99.8 2.3E-18 7.9E-23 141.0 13.8 174 24-211 23-203 (230)
65 3i9f_A Putative type 11 methyl 99.8 1.6E-18 5.5E-23 135.8 12.3 142 24-193 7-149 (170)
66 4hg2_A Methyltransferase type 99.8 2.5E-19 8.5E-24 150.0 8.1 111 22-145 29-140 (257)
67 3grz_A L11 mtase, ribosomal pr 99.8 1.8E-18 6.1E-23 139.8 12.9 129 32-193 58-186 (205)
68 3mq2_A 16S rRNA methyltransfer 99.8 6.6E-20 2.2E-24 149.7 4.3 178 26-215 19-208 (218)
69 2a14_A Indolethylamine N-methy 99.8 6.7E-19 2.3E-23 148.1 10.4 151 31-193 52-239 (263)
70 3ofk_A Nodulation protein S; N 99.8 2E-18 6.7E-23 140.6 12.7 115 24-142 41-156 (216)
71 3g07_A 7SK snRNA methylphospha 99.8 1.2E-18 4E-23 148.8 11.6 116 25-140 35-220 (292)
72 3bkw_A MLL3908 protein, S-aden 99.8 2.9E-18 9.9E-23 141.9 13.6 111 24-141 33-145 (243)
73 1y8c_A S-adenosylmethionine-de 99.8 1E-17 3.6E-22 138.6 16.7 105 34-141 37-143 (246)
74 2kw5_A SLR1183 protein; struct 99.8 6.6E-18 2.2E-22 136.1 15.0 151 23-193 21-172 (202)
75 3bgv_A MRNA CAP guanine-N7 met 99.8 6.5E-18 2.2E-22 145.5 15.9 119 24-142 22-157 (313)
76 4e2x_A TCAB9; kijanose, tetron 99.8 2.3E-19 7.9E-24 160.5 6.6 173 7-193 80-254 (416)
77 3njr_A Precorrin-6Y methylase; 99.8 1.5E-17 5E-22 134.6 16.4 111 24-142 45-156 (204)
78 3e8s_A Putative SAM dependent 99.8 2.1E-18 7.3E-23 141.0 11.5 156 24-191 42-208 (227)
79 3e05_A Precorrin-6Y C5,15-meth 99.8 2.6E-17 8.9E-22 132.9 17.7 114 22-141 28-143 (204)
80 3reo_A (ISO)eugenol O-methyltr 99.8 9.4E-18 3.2E-22 147.7 15.5 160 23-193 191-356 (368)
81 3p9c_A Caffeic acid O-methyltr 99.8 1.3E-17 4.4E-22 146.6 15.8 160 23-193 189-354 (364)
82 3p2e_A 16S rRNA methylase; met 99.8 2.5E-19 8.4E-24 147.3 4.3 163 33-207 23-201 (225)
83 3mti_A RRNA methylase; SAM-dep 99.8 7.3E-18 2.5E-22 134.0 12.7 110 31-142 19-137 (185)
84 2g72_A Phenylethanolamine N-me 99.8 3.2E-18 1.1E-22 145.7 11.3 164 19-193 54-257 (289)
85 3fpf_A Mtnas, putative unchara 99.8 1.6E-17 5.3E-22 140.4 15.1 107 27-140 115-222 (298)
86 2qe6_A Uncharacterized protein 99.8 3.3E-17 1.1E-21 138.5 17.0 163 17-188 59-238 (274)
87 3thr_A Glycine N-methyltransfe 99.8 1E-17 3.5E-22 142.7 13.9 118 24-142 47-177 (293)
88 3bxo_A N,N-dimethyltransferase 99.8 3.2E-17 1.1E-21 135.2 16.2 106 33-145 39-146 (239)
89 1wzn_A SAM-dependent methyltra 99.8 3.2E-17 1.1E-21 136.5 16.3 119 20-141 27-146 (252)
90 3cgg_A SAM-dependent methyltra 99.8 4.1E-17 1.4E-21 130.1 16.1 134 26-191 39-174 (195)
91 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.4E-17 4.9E-22 131.2 13.2 115 21-142 12-129 (178)
92 3dxy_A TRNA (guanine-N(7)-)-me 99.7 5.4E-18 1.8E-22 138.6 10.9 125 15-140 1-150 (218)
93 3eey_A Putative rRNA methylase 99.7 2.6E-17 8.9E-22 132.1 13.9 114 29-142 17-141 (197)
94 1dus_A MJ0882; hypothetical pr 99.7 5E-17 1.7E-21 129.4 15.1 119 22-142 40-159 (194)
95 3p9n_A Possible methyltransfer 99.7 2.3E-17 8E-22 131.6 13.1 108 33-142 43-155 (189)
96 2vdw_A Vaccinia virus capping 99.7 7.7E-18 2.6E-22 144.2 10.9 109 34-142 48-171 (302)
97 2aot_A HMT, histamine N-methyl 99.7 1.1E-17 3.9E-22 142.6 11.7 150 33-189 51-218 (292)
98 2i62_A Nicotinamide N-methyltr 99.7 1.9E-17 6.6E-22 138.7 12.5 152 31-194 53-241 (265)
99 1fp1_D Isoliquiritigenin 2'-O- 99.7 1.7E-17 5.7E-22 146.4 12.5 158 23-191 197-359 (372)
100 2y1w_A Histone-arginine methyl 99.7 4.3E-17 1.5E-21 142.4 13.6 176 24-204 40-223 (348)
101 3evz_A Methyltransferase; NYSG 99.7 1.3E-16 4.3E-21 131.1 15.6 108 31-140 52-179 (230)
102 1vlm_A SAM-dependent methyltra 99.7 6.3E-17 2.2E-21 132.1 13.3 141 35-193 48-189 (219)
103 3lbf_A Protein-L-isoaspartate 99.7 5E-17 1.7E-21 131.7 12.5 113 20-142 63-176 (210)
104 3ggd_A SAM-dependent methyltra 99.7 5.5E-17 1.9E-21 134.6 12.4 109 32-145 54-168 (245)
105 3lpm_A Putative methyltransfer 99.7 2E-16 6.9E-21 132.5 15.8 114 26-139 40-175 (259)
106 3fzg_A 16S rRNA methylase; met 99.7 1.9E-17 6.6E-22 130.2 8.6 109 24-138 41-150 (200)
107 2esr_A Methyltransferase; stru 99.7 5E-17 1.7E-21 128.2 10.9 121 19-142 15-140 (177)
108 3uwp_A Histone-lysine N-methyl 99.7 4.7E-17 1.6E-21 142.5 11.6 128 16-146 155-294 (438)
109 4df3_A Fibrillarin-like rRNA/T 99.7 4.4E-17 1.5E-21 133.5 10.7 107 28-141 71-183 (233)
110 3htx_A HEN1; HEN1, small RNA m 99.7 3.2E-16 1.1E-20 146.8 17.6 120 21-142 708-836 (950)
111 1l3i_A Precorrin-6Y methyltran 99.7 1.2E-16 3.9E-21 127.1 12.6 115 21-141 20-135 (192)
112 3orh_A Guanidinoacetate N-meth 99.7 2E-17 6.9E-22 136.8 8.2 104 32-139 58-169 (236)
113 2gs9_A Hypothetical protein TT 99.7 1E-16 3.5E-21 129.9 12.1 108 23-143 26-135 (211)
114 1yzh_A TRNA (guanine-N(7)-)-me 99.7 2.7E-16 9.3E-21 127.9 14.6 106 33-139 40-155 (214)
115 1xdz_A Methyltransferase GIDB; 99.7 1.2E-16 4.3E-21 132.3 12.5 101 32-139 68-173 (240)
116 3dr5_A Putative O-methyltransf 99.7 1.4E-16 4.6E-21 130.5 12.3 121 17-142 39-165 (221)
117 2nxc_A L11 mtase, ribosomal pr 99.7 1.5E-16 5E-21 133.1 12.7 128 32-193 118-245 (254)
118 1fp2_A Isoflavone O-methyltran 99.7 1.2E-16 4.2E-21 139.8 12.2 153 27-192 179-341 (352)
119 1zx0_A Guanidinoacetate N-meth 99.7 4.2E-17 1.4E-21 134.7 8.7 117 23-142 50-172 (236)
120 3ntv_A MW1564 protein; rossman 99.7 8.6E-17 3E-21 132.6 10.3 109 29-142 66-178 (232)
121 3d2l_A SAM-dependent methyltra 99.7 4.2E-16 1.5E-20 128.8 14.5 113 23-141 24-138 (243)
122 2b3t_A Protein methyltransfera 99.7 2.8E-16 9.5E-21 132.9 13.5 117 21-139 97-237 (276)
123 3b3j_A Histone-arginine methyl 99.7 2.1E-16 7.1E-21 143.3 13.4 181 23-206 147-333 (480)
124 4dcm_A Ribosomal RNA large sub 99.7 3.2E-16 1.1E-20 138.0 13.7 117 24-140 212-334 (375)
125 2fhp_A Methylase, putative; al 99.7 2E-16 6.9E-21 125.5 11.1 119 21-142 30-156 (187)
126 3r0q_C Probable protein argini 99.7 2.1E-16 7.2E-21 139.4 12.3 117 24-141 53-170 (376)
127 2yxd_A Probable cobalt-precorr 99.7 8.9E-16 3.1E-20 121.1 14.7 112 20-141 21-132 (183)
128 2ift_A Putative methylase HI07 99.7 1.2E-16 4E-21 129.0 9.7 116 24-142 42-165 (201)
129 2fyt_A Protein arginine N-meth 99.7 4.4E-16 1.5E-20 135.5 13.8 112 24-138 54-169 (340)
130 3u81_A Catechol O-methyltransf 99.7 1.4E-16 4.7E-21 130.4 10.0 107 33-142 57-172 (221)
131 2pxx_A Uncharacterized protein 99.7 3E-16 1E-20 127.2 11.8 107 33-142 41-161 (215)
132 3q7e_A Protein arginine N-meth 99.7 2.3E-16 7.7E-21 137.9 11.7 107 31-138 63-171 (349)
133 1jsx_A Glucose-inhibited divis 99.7 6.3E-16 2.1E-20 124.9 13.2 99 34-139 65-164 (207)
134 2frn_A Hypothetical protein PH 99.7 5.2E-16 1.8E-20 131.4 13.1 105 32-142 123-227 (278)
135 3kr9_A SAM-dependent methyltra 99.7 1.7E-15 5.9E-20 123.5 15.6 105 32-140 13-119 (225)
136 3lec_A NADB-rossmann superfami 99.7 1.2E-15 4.1E-20 124.6 14.6 105 32-140 19-125 (230)
137 2fca_A TRNA (guanine-N(7)-)-me 99.7 4.6E-16 1.6E-20 126.6 12.1 107 33-140 37-153 (213)
138 1u2z_A Histone-lysine N-methyl 99.7 6E-16 2E-20 137.7 12.9 122 20-144 228-363 (433)
139 3g89_A Ribosomal RNA small sub 99.7 3.9E-16 1.3E-20 130.1 10.9 100 33-139 79-183 (249)
140 3giw_A Protein of unknown func 99.7 9.5E-16 3.2E-20 128.1 13.2 166 16-187 59-242 (277)
141 2avn_A Ubiquinone/menaquinone 99.7 8.5E-16 2.9E-20 128.7 13.0 111 22-142 43-154 (260)
142 3dmg_A Probable ribosomal RNA 99.7 9.1E-16 3.1E-20 135.3 13.6 122 17-141 214-341 (381)
143 1zg3_A Isoflavanone 4'-O-methy 99.7 2.9E-16 1E-20 137.7 10.3 156 25-192 182-347 (358)
144 1yb2_A Hypothetical protein TA 99.7 9E-16 3.1E-20 129.7 12.7 110 24-141 100-212 (275)
145 1fbn_A MJ fibrillarin homologu 99.7 1.3E-15 4.6E-20 125.2 13.2 108 24-139 61-177 (230)
146 1vbf_A 231AA long hypothetical 99.7 9.5E-16 3.2E-20 126.0 12.1 111 20-142 56-167 (231)
147 2ipx_A RRNA 2'-O-methyltransfe 99.6 1.7E-15 5.7E-20 124.8 13.4 108 27-141 70-183 (233)
148 3tfw_A Putative O-methyltransf 99.6 8.1E-16 2.8E-20 128.1 11.5 107 32-143 61-173 (248)
149 1nt2_A Fibrillarin-like PRE-rR 99.6 1.8E-15 6.1E-20 122.9 13.3 104 30-140 53-161 (210)
150 3duw_A OMT, O-methyltransferas 99.6 3.5E-16 1.2E-20 127.9 9.1 107 32-143 56-170 (223)
151 3mb5_A SAM-dependent methyltra 99.6 1.5E-15 5.2E-20 126.6 13.2 112 23-141 82-195 (255)
152 2gpy_A O-methyltransferase; st 99.6 5.2E-16 1.8E-20 127.9 10.2 111 27-142 47-162 (233)
153 2yxe_A Protein-L-isoaspartate 99.6 1.9E-15 6.6E-20 122.7 13.2 114 20-142 63-179 (215)
154 3q87_B N6 adenine specific DNA 99.6 1E-15 3.5E-20 120.2 11.1 120 33-191 22-148 (170)
155 2fpo_A Methylase YHHF; structu 99.6 7E-16 2.4E-20 124.5 10.3 117 22-142 41-162 (202)
156 2h00_A Methyltransferase 10 do 99.6 1.7E-16 5.8E-21 132.5 6.8 117 23-139 52-191 (254)
157 2pwy_A TRNA (adenine-N(1)-)-me 99.6 2.7E-15 9.2E-20 125.2 14.2 110 24-141 86-199 (258)
158 3bzb_A Uncharacterized protein 99.6 5.9E-15 2E-19 125.1 16.4 119 19-139 64-204 (281)
159 2igt_A SAM dependent methyltra 99.6 2.9E-15 9.9E-20 129.8 14.6 123 19-142 137-274 (332)
160 3gnl_A Uncharacterized protein 99.6 3.9E-15 1.3E-19 122.5 14.6 105 32-140 19-125 (244)
161 4dzr_A Protein-(glutamine-N5) 99.6 1.6E-16 5.4E-21 128.7 6.0 117 20-138 15-162 (215)
162 2ozv_A Hypothetical protein AT 99.6 8E-16 2.7E-20 129.0 10.4 114 26-139 28-169 (260)
163 1g6q_1 HnRNP arginine N-methyl 99.6 1.5E-15 5E-20 131.6 12.3 114 24-138 28-143 (328)
164 3gdh_A Trimethylguanosine synt 99.6 2.5E-17 8.5E-22 136.4 1.0 103 34-139 78-180 (241)
165 1o9g_A RRNA methyltransferase; 99.6 7.9E-16 2.7E-20 128.2 10.0 120 20-139 37-213 (250)
166 3id6_C Fibrillarin-like rRNA/T 99.6 8.6E-15 2.9E-19 120.2 15.9 110 24-140 63-181 (232)
167 3m33_A Uncharacterized protein 99.6 1.3E-15 4.4E-20 125.0 10.6 90 33-137 47-139 (226)
168 3tr6_A O-methyltransferase; ce 99.6 4.8E-16 1.7E-20 127.2 7.9 106 33-143 63-177 (225)
169 1ixk_A Methyltransferase; open 99.6 3.7E-15 1.3E-19 128.4 13.5 117 25-142 109-248 (315)
170 2pjd_A Ribosomal RNA small sub 99.6 1.8E-15 6.2E-20 131.8 10.7 116 24-142 186-305 (343)
171 3ajd_A Putative methyltransfer 99.6 4.9E-15 1.7E-19 125.2 12.8 117 26-143 75-214 (274)
172 1o54_A SAM-dependent O-methylt 99.6 5.3E-15 1.8E-19 125.0 13.0 111 24-141 102-214 (277)
173 1ws6_A Methyltransferase; stru 99.6 1.1E-15 3.6E-20 119.5 8.1 103 34-143 41-150 (171)
174 2hnk_A SAM-dependent O-methylt 99.6 7.9E-16 2.7E-20 127.3 7.4 108 30-142 56-183 (239)
175 4hc4_A Protein arginine N-meth 99.6 2E-15 7E-20 132.2 10.2 106 32-138 81-187 (376)
176 1i1n_A Protein-L-isoaspartate 99.6 1E-14 3.5E-19 119.4 13.8 111 24-142 65-184 (226)
177 4azs_A Methyltransferase WBDD; 99.6 1.9E-15 6.4E-20 140.2 10.5 110 33-144 65-177 (569)
178 1jg1_A PIMT;, protein-L-isoasp 99.6 5.1E-15 1.8E-19 122.1 12.1 113 21-142 78-191 (235)
179 1af7_A Chemotaxis receptor met 99.6 4.9E-15 1.7E-19 124.7 12.1 105 34-138 105-250 (274)
180 3c3p_A Methyltransferase; NP_9 99.6 2E-15 6.7E-20 122.4 9.1 105 33-143 55-163 (210)
181 3k6r_A Putative transferase PH 99.6 5.8E-15 2E-19 124.3 12.2 110 25-142 118-227 (278)
182 2yvl_A TRMI protein, hypotheti 99.6 1.4E-14 4.7E-19 120.1 14.3 111 23-141 80-191 (248)
183 3r3h_A O-methyltransferase, SA 99.6 2.5E-16 8.6E-21 130.7 3.7 108 33-145 59-175 (242)
184 3ckk_A TRNA (guanine-N(7)-)-me 99.6 4.3E-15 1.5E-19 122.7 10.9 107 32-139 44-167 (235)
185 1nv8_A HEMK protein; class I a 99.6 7.8E-15 2.7E-19 124.5 12.6 116 23-139 112-248 (284)
186 1i9g_A Hypothetical protein RV 99.6 7.3E-15 2.5E-19 124.2 12.4 112 23-141 88-204 (280)
187 1sui_A Caffeoyl-COA O-methyltr 99.6 2.1E-15 7.3E-20 125.5 8.7 105 33-142 78-192 (247)
188 1p91_A Ribosomal RNA large sub 99.6 1.6E-14 5.3E-19 121.4 14.1 96 33-143 84-181 (269)
189 3a27_A TYW2, uncharacterized p 99.6 7.9E-15 2.7E-19 123.7 12.3 106 31-143 116-222 (272)
190 2zfu_A Nucleomethylin, cerebra 99.6 3.1E-15 1.1E-19 121.5 9.0 120 26-192 58-179 (215)
191 3tma_A Methyltransferase; thum 99.6 2.4E-14 8.2E-19 125.3 14.1 117 23-140 192-317 (354)
192 1g8a_A Fibrillarin-like PRE-rR 99.6 1.4E-14 4.9E-19 118.7 11.8 106 27-139 66-177 (227)
193 2pbf_A Protein-L-isoaspartate 99.6 1.5E-14 5.2E-19 118.4 11.7 111 24-142 68-195 (227)
194 3c3y_A Pfomt, O-methyltransfer 99.6 6.9E-15 2.3E-19 121.6 9.3 105 33-142 69-183 (237)
195 1r18_A Protein-L-isoaspartate( 99.6 9.3E-15 3.2E-19 119.9 9.6 111 23-141 71-195 (227)
196 1wy7_A Hypothetical protein PH 99.6 1.7E-13 5.8E-18 110.5 16.2 100 27-130 42-141 (207)
197 3hp7_A Hemolysin, putative; st 99.5 8.4E-15 2.9E-19 123.8 8.2 107 22-139 72-184 (291)
198 3cbg_A O-methyltransferase; cy 99.5 7.4E-15 2.5E-19 121.0 7.7 106 33-143 71-185 (232)
199 2vdv_E TRNA (guanine-N(7)-)-me 99.5 4.1E-14 1.4E-18 117.6 12.0 106 33-139 48-172 (246)
200 2avd_A Catechol-O-methyltransf 99.5 1E-14 3.4E-19 119.7 8.2 106 32-142 67-181 (229)
201 2b25_A Hypothetical protein; s 99.5 5.3E-14 1.8E-18 122.2 12.1 113 23-142 94-221 (336)
202 2plw_A Ribosomal RNA methyltra 99.5 6.9E-14 2.3E-18 112.3 11.8 108 23-142 10-156 (201)
203 2bm8_A Cephalosporin hydroxyla 99.5 9.7E-15 3.3E-19 120.6 6.6 97 34-141 81-188 (236)
204 2yxl_A PH0851 protein, 450AA l 99.5 1.9E-13 6.4E-18 123.3 15.5 118 25-143 250-392 (450)
205 3adn_A Spermidine synthase; am 99.5 3.7E-14 1.2E-18 120.8 10.0 109 33-141 82-199 (294)
206 3bwc_A Spermidine synthase; SA 99.5 5.8E-14 2E-18 120.3 11.0 109 32-140 93-210 (304)
207 1zq9_A Probable dimethyladenos 99.5 7.2E-14 2.5E-18 118.6 11.0 115 20-137 14-144 (285)
208 2b78_A Hypothetical protein SM 99.5 1.2E-13 4E-18 122.1 12.5 110 33-142 211-333 (385)
209 3m4x_A NOL1/NOP2/SUN family pr 99.5 8.4E-14 2.9E-18 124.9 11.6 120 25-145 96-239 (456)
210 3m6w_A RRNA methylase; rRNA me 99.5 1.4E-13 4.9E-18 123.6 12.7 117 25-143 92-232 (464)
211 1ej0_A FTSJ; methyltransferase 99.5 5.2E-14 1.8E-18 110.0 8.7 109 22-142 9-138 (180)
212 2qm3_A Predicted methyltransfe 99.5 2E-12 6.9E-17 113.8 19.8 102 32-138 170-276 (373)
213 3tm4_A TRNA (guanine N2-)-meth 99.5 3E-13 1E-17 119.0 13.9 112 24-138 208-327 (373)
214 3lcv_B Sisomicin-gentamicin re 99.5 4.4E-14 1.5E-18 116.1 7.9 103 33-138 131-234 (281)
215 2frx_A Hypothetical protein YE 99.5 1.7E-13 5.8E-18 124.0 12.4 117 27-144 108-250 (479)
216 3sso_A Methyltransferase; macr 99.5 3.9E-14 1.3E-18 123.8 7.5 108 21-142 204-326 (419)
217 2ld4_A Anamorsin; methyltransf 99.5 9E-14 3.1E-18 109.4 8.5 122 29-191 7-133 (176)
218 1ne2_A Hypothetical protein TA 99.5 2.9E-13 9.8E-18 108.7 11.5 92 31-130 48-139 (200)
219 1yub_A Ermam, rRNA methyltrans 99.5 2.1E-15 7.1E-20 125.4 -1.3 112 22-139 17-144 (245)
220 1sqg_A SUN protein, FMU protei 99.5 4.7E-13 1.6E-17 120.0 13.8 118 24-143 236-377 (429)
221 3c0k_A UPF0064 protein YCCW; P 99.5 2E-13 6.8E-18 121.2 11.2 110 33-142 219-341 (396)
222 3gjy_A Spermidine synthase; AP 99.5 1.7E-13 5.7E-18 117.1 10.2 106 36-142 91-202 (317)
223 2o07_A Spermidine synthase; st 99.5 1.7E-13 5.9E-18 117.2 10.0 112 31-142 92-211 (304)
224 2as0_A Hypothetical protein PH 99.5 1.3E-13 4.6E-18 122.3 9.6 110 33-142 216-337 (396)
225 1xj5_A Spermidine synthase 1; 99.5 1.9E-13 6.4E-18 118.4 10.2 109 31-139 117-234 (334)
226 3opn_A Putative hemolysin; str 99.5 5.4E-15 1.9E-19 121.8 0.5 107 22-139 24-136 (232)
227 2f8l_A Hypothetical protein LM 99.5 4.7E-13 1.6E-17 116.6 12.8 116 24-141 119-257 (344)
228 1uwv_A 23S rRNA (uracil-5-)-me 99.5 1.8E-12 6.3E-17 116.2 16.8 114 18-139 270-388 (433)
229 3frh_A 16S rRNA methylase; met 99.5 3.6E-13 1.2E-17 109.7 11.0 101 33-138 104-204 (253)
230 2b2c_A Spermidine synthase; be 99.5 6.6E-14 2.3E-18 120.2 6.6 107 33-140 107-222 (314)
231 2i7c_A Spermidine synthase; tr 99.5 2.5E-13 8.4E-18 115.2 9.9 110 31-140 75-192 (283)
232 1uir_A Polyamine aminopropyltr 99.4 1.8E-13 6.2E-18 117.7 9.0 109 33-141 76-196 (314)
233 2pt6_A Spermidine synthase; tr 99.4 9.9E-14 3.4E-18 119.6 7.2 107 33-140 115-230 (321)
234 1wxx_A TT1595, hypothetical pr 99.4 2.5E-13 8.6E-18 120.0 9.7 107 34-142 209-327 (382)
235 3dou_A Ribosomal RNA large sub 99.4 3.8E-13 1.3E-17 107.4 9.6 110 20-142 10-141 (191)
236 4dmg_A Putative uncharacterize 99.4 5E-13 1.7E-17 118.1 11.2 107 33-142 213-328 (393)
237 1mjf_A Spermidine synthase; sp 99.4 1.2E-13 4E-18 117.1 6.8 108 33-141 74-194 (281)
238 3v97_A Ribosomal RNA large sub 99.4 5.8E-13 2E-17 125.9 12.1 107 34-142 539-659 (703)
239 2wa2_A Non-structural protein 99.4 3E-14 1E-18 120.2 2.8 116 22-142 70-195 (276)
240 2yx1_A Hypothetical protein MJ 99.4 5.6E-13 1.9E-17 115.7 10.7 100 33-142 194-293 (336)
241 2oxt_A Nucleoside-2'-O-methylt 99.4 3.7E-14 1.3E-18 118.9 2.9 117 21-142 61-187 (265)
242 1inl_A Spermidine synthase; be 99.4 2.2E-13 7.5E-18 116.2 7.7 108 33-140 89-205 (296)
243 1iy9_A Spermidine synthase; ro 99.4 2.1E-13 7.3E-18 115.1 7.5 108 33-140 74-189 (275)
244 2h1r_A Dimethyladenosine trans 99.4 1.3E-12 4.5E-17 111.5 11.8 90 21-113 29-118 (299)
245 2jjq_A Uncharacterized RNA met 99.4 4.3E-12 1.5E-16 113.3 15.3 106 23-140 282-387 (425)
246 2nyu_A Putative ribosomal RNA 99.4 2.2E-12 7.6E-17 102.9 9.7 107 24-142 11-147 (196)
247 3ldu_A Putative methylase; str 99.4 5.4E-12 1.9E-16 111.3 12.5 118 22-139 183-343 (385)
248 2okc_A Type I restriction enzy 99.4 2E-12 6.8E-17 116.4 9.6 120 22-141 159-308 (445)
249 3gru_A Dimethyladenosine trans 99.4 1.2E-11 4E-16 105.1 13.8 89 20-112 36-125 (295)
250 3k0b_A Predicted N6-adenine-sp 99.4 7.3E-12 2.5E-16 110.7 13.0 118 22-139 189-349 (393)
251 3ldg_A Putative uncharacterize 99.3 1.8E-11 6E-16 107.8 15.1 118 22-139 182-342 (384)
252 1qam_A ERMC' methyltransferase 99.3 4.9E-12 1.7E-16 104.9 10.1 86 20-110 16-103 (244)
253 2b9e_A NOL1/NOP2/SUN domain fa 99.3 5.3E-11 1.8E-15 101.9 16.8 117 25-143 93-237 (309)
254 2ih2_A Modification methylase 99.3 5.4E-12 1.9E-16 112.6 9.5 111 22-142 27-166 (421)
255 2cmg_A Spermidine synthase; tr 99.3 4.2E-12 1.4E-16 106.3 7.7 98 33-140 71-171 (262)
256 2p41_A Type II methyltransfera 99.3 1.1E-12 3.8E-17 112.2 4.1 113 23-141 71-192 (305)
257 2xyq_A Putative 2'-O-methyl tr 99.3 1.7E-11 5.9E-16 103.6 11.2 98 29-142 58-173 (290)
258 3bt7_A TRNA (uracil-5-)-methyl 99.3 5.2E-11 1.8E-15 104.6 12.8 110 20-140 200-326 (369)
259 2dul_A N(2),N(2)-dimethylguano 99.2 3.4E-11 1.1E-15 105.9 11.2 100 34-140 47-164 (378)
260 3axs_A Probable N(2),N(2)-dime 99.2 1.5E-11 5.1E-16 108.3 8.7 102 33-140 51-158 (392)
261 3b5i_A S-adenosyl-L-methionine 99.2 7.9E-09 2.7E-13 90.3 25.1 219 20-239 33-356 (374)
262 3tqs_A Ribosomal RNA small sub 99.2 9.6E-11 3.3E-15 97.5 11.9 86 21-111 16-106 (255)
263 2r6z_A UPF0341 protein in RSP 99.2 2.1E-11 7.1E-16 101.8 6.6 88 26-114 75-174 (258)
264 3fut_A Dimethyladenosine trans 99.2 1.3E-10 4.5E-15 97.4 11.2 87 20-112 33-121 (271)
265 4gqb_A Protein arginine N-meth 99.2 1.5E-10 5E-15 107.3 11.3 103 34-137 357-464 (637)
266 3cvo_A Methyltransferase-like 99.2 3.7E-10 1.3E-14 90.2 11.8 113 15-141 16-155 (202)
267 1m6y_A S-adenosyl-methyltransf 99.1 6E-11 2E-15 101.0 7.3 86 23-110 15-107 (301)
268 2qfm_A Spermine synthase; sper 99.1 1.2E-10 4.2E-15 100.7 7.6 110 33-142 187-316 (364)
269 3ftd_A Dimethyladenosine trans 99.1 7.9E-10 2.7E-14 91.7 11.5 73 20-97 17-89 (249)
270 2efj_A 3,7-dimethylxanthine me 99.1 7.2E-09 2.5E-13 90.6 17.6 154 35-192 53-292 (384)
271 3uzu_A Ribosomal RNA small sub 99.1 7.1E-10 2.4E-14 93.5 10.5 71 21-97 29-103 (279)
272 2ar0_A M.ecoki, type I restric 99.1 4.6E-10 1.6E-14 103.2 9.7 118 24-141 159-313 (541)
273 3v97_A Ribosomal RNA large sub 99.0 2.1E-09 7.1E-14 101.7 13.6 119 22-140 178-347 (703)
274 3ll7_A Putative methyltransfer 99.0 2.7E-10 9.3E-15 100.5 5.9 101 7-110 67-172 (410)
275 2oyr_A UPF0341 protein YHIQ; a 99.0 1.4E-10 4.6E-15 96.6 3.7 90 24-114 76-177 (258)
276 3khk_A Type I restriction-modi 99.0 6.5E-10 2.2E-14 102.1 8.6 117 24-141 235-396 (544)
277 3ua3_A Protein arginine N-meth 99.0 2E-09 6.8E-14 99.8 9.8 102 35-137 410-531 (745)
278 4fzv_A Putative methyltransfer 99.0 4.4E-09 1.5E-13 91.4 11.2 121 26-146 140-290 (359)
279 1qyr_A KSGA, high level kasuga 98.9 1.1E-09 3.9E-14 90.9 6.6 85 21-111 8-100 (252)
280 3o4f_A Spermidine synthase; am 98.9 6.7E-09 2.3E-13 87.5 10.2 110 33-142 82-200 (294)
281 3lkd_A Type I restriction-modi 98.9 9.8E-09 3.4E-13 94.1 11.9 110 32-141 219-359 (542)
282 1m6e_X S-adenosyl-L-methionnin 98.9 9.3E-09 3.2E-13 89.2 10.8 157 35-192 52-280 (359)
283 3evf_A RNA-directed RNA polyme 98.8 2.9E-09 1E-13 88.1 5.0 118 21-142 61-186 (277)
284 2qy6_A UPF0209 protein YFCK; s 98.8 8.8E-09 3E-13 85.7 6.5 134 4-138 27-211 (257)
285 2wk1_A NOVP; transferase, O-me 98.7 5E-08 1.7E-12 81.9 8.8 123 15-141 86-245 (282)
286 3s1s_A Restriction endonucleas 98.6 1.5E-07 5.2E-12 88.6 10.9 110 33-142 320-467 (878)
287 3gcz_A Polyprotein; flavivirus 98.6 1.3E-08 4.3E-13 84.4 3.1 117 21-142 77-203 (282)
288 1wg8_A Predicted S-adenosylmet 98.6 8.3E-08 2.8E-12 79.9 7.6 83 23-111 11-99 (285)
289 2k4m_A TR8_protein, UPF0146 pr 98.5 3.3E-07 1.1E-11 68.4 8.2 98 20-142 23-123 (153)
290 3c6k_A Spermine synthase; sper 98.5 2.3E-07 7.8E-12 80.6 7.0 108 33-140 204-331 (381)
291 3ufb_A Type I restriction-modi 98.5 1.8E-06 6.2E-11 79.0 13.3 119 22-141 205-363 (530)
292 3lkz_A Non-structural protein 98.5 1.1E-06 3.8E-11 72.9 10.3 119 20-142 80-206 (321)
293 3p8z_A Mtase, non-structural p 98.4 3.5E-06 1.2E-10 67.7 11.4 119 19-142 63-188 (267)
294 4auk_A Ribosomal RNA large sub 98.4 1.3E-06 4.3E-11 75.6 9.2 71 32-111 209-280 (375)
295 2px2_A Genome polyprotein [con 98.3 4.9E-06 1.7E-10 67.9 10.3 114 19-142 58-185 (269)
296 3eld_A Methyltransferase; flav 98.3 9.6E-07 3.3E-11 73.6 5.7 116 22-142 69-193 (300)
297 2zig_A TTHA0409, putative modi 98.2 6.8E-06 2.3E-10 69.7 9.8 58 21-80 223-280 (297)
298 1rjd_A PPM1P, carboxy methyl t 98.1 8.5E-05 2.9E-09 63.9 15.4 154 33-193 96-287 (334)
299 3tka_A Ribosomal RNA small sub 97.9 1E-05 3.4E-10 69.0 5.8 85 23-112 46-139 (347)
300 1i4w_A Mitochondrial replicati 97.8 6.4E-05 2.2E-09 65.0 8.9 73 20-96 38-117 (353)
301 2uyo_A Hypothetical protein ML 97.8 0.00055 1.9E-08 58.2 14.4 106 35-142 103-220 (310)
302 1g60_A Adenine-specific methyl 97.8 6.7E-05 2.3E-09 62.3 7.9 59 21-81 200-258 (260)
303 3r24_A NSP16, 2'-O-methyl tran 97.6 9.4E-05 3.2E-09 61.5 6.1 109 22-145 92-222 (344)
304 2vz8_A Fatty acid synthase; tr 97.5 2.8E-05 9.4E-10 82.8 2.4 104 33-142 1239-1350(2512)
305 3vyw_A MNMC2; tRNA wobble urid 97.3 0.00073 2.5E-08 57.0 8.4 156 5-193 65-249 (308)
306 1f8f_A Benzyl alcohol dehydrog 97.3 0.0011 3.9E-08 57.6 9.9 100 25-139 181-288 (371)
307 2oo3_A Protein involved in cat 97.3 5.5E-05 1.9E-09 63.0 1.1 104 35-144 92-202 (283)
308 2dph_A Formaldehyde dismutase; 97.3 0.0016 5.6E-08 57.2 10.2 105 27-139 178-298 (398)
309 3two_A Mannitol dehydrogenase; 97.1 0.002 6.9E-08 55.5 9.1 97 25-139 167-264 (348)
310 3tos_A CALS11; methyltransfera 97.1 0.0025 8.7E-08 52.4 8.9 114 24-142 60-219 (257)
311 1kol_A Formaldehyde dehydrogen 97.0 0.0029 1E-07 55.5 9.8 103 27-139 178-299 (398)
312 1pl8_A Human sorbitol dehydrog 97.0 0.0029 1E-07 54.7 9.5 98 27-139 164-272 (356)
313 3s2e_A Zinc-containing alcohol 97.0 0.002 7E-08 55.3 8.1 99 26-139 158-262 (340)
314 2py6_A Methyltransferase FKBM; 97.0 0.0029 9.9E-08 55.9 9.2 66 32-97 224-295 (409)
315 4ej6_A Putative zinc-binding d 97.0 0.006 2.1E-07 53.0 11.0 98 27-139 175-283 (370)
316 3iei_A Leucine carboxyl methyl 97.0 0.022 7.5E-07 48.8 14.2 158 34-196 90-285 (334)
317 3fpc_A NADP-dependent alcohol 97.0 0.0032 1.1E-07 54.3 9.1 99 26-139 158-265 (352)
318 1pqw_A Polyketide synthase; ro 96.9 0.0066 2.3E-07 47.6 9.5 93 28-138 32-135 (198)
319 3uog_A Alcohol dehydrogenase; 96.8 0.0038 1.3E-07 54.1 8.7 97 28-140 183-287 (363)
320 1e3j_A NADP(H)-dependent ketos 96.8 0.01 3.6E-07 51.0 11.0 98 27-139 161-270 (352)
321 3m6i_A L-arabinitol 4-dehydrog 96.7 0.005 1.7E-07 53.3 8.6 100 26-139 171-282 (363)
322 3gms_A Putative NADPH:quinone 96.7 0.0051 1.7E-07 52.7 8.4 100 24-139 134-242 (340)
323 1uuf_A YAHK, zinc-type alcohol 96.7 0.0059 2E-07 53.1 8.6 96 26-138 186-286 (369)
324 3ip1_A Alcohol dehydrogenase, 96.7 0.023 8E-07 49.9 12.3 97 31-139 210-317 (404)
325 4b7c_A Probable oxidoreductase 96.6 0.0098 3.3E-07 50.8 9.6 103 22-139 137-247 (336)
326 3uko_A Alcohol dehydrogenase c 96.6 0.0078 2.7E-07 52.4 8.7 99 26-139 185-294 (378)
327 1p0f_A NADP-dependent alcohol 96.6 0.012 4.1E-07 51.1 9.8 99 26-139 183-292 (373)
328 3goh_A Alcohol dehydrogenase, 96.6 0.0062 2.1E-07 51.6 7.8 93 27-139 135-228 (315)
329 3jyn_A Quinone oxidoreductase; 96.6 0.018 6E-07 49.0 10.6 98 26-139 132-238 (325)
330 2fzw_A Alcohol dehydrogenase c 96.5 0.018 6.3E-07 49.9 10.5 99 26-139 182-291 (373)
331 1cdo_A Alcohol dehydrogenase; 96.4 0.016 5.4E-07 50.4 9.7 99 26-139 184-293 (374)
332 2jhf_A Alcohol dehydrogenase E 96.4 0.02 6.8E-07 49.7 10.1 99 26-139 183-292 (374)
333 1v3u_A Leukotriene B4 12- hydr 96.4 0.021 7.1E-07 48.7 10.0 98 24-139 135-243 (333)
334 3qwb_A Probable quinone oxidor 96.4 0.017 5.9E-07 49.2 9.5 96 28-139 142-246 (334)
335 2h6e_A ADH-4, D-arabinose 1-de 96.4 0.0026 9E-08 54.7 4.3 93 31-139 168-268 (344)
336 3jv7_A ADH-A; dehydrogenase, n 96.3 0.012 4.2E-07 50.4 8.4 93 31-139 168-269 (345)
337 3g7u_A Cytosine-specific methy 96.3 0.021 7.1E-07 49.8 9.8 71 36-113 3-83 (376)
338 1vj0_A Alcohol dehydrogenase, 96.3 0.013 4.5E-07 51.0 8.6 99 26-139 186-297 (380)
339 1e3i_A Alcohol dehydrogenase, 96.3 0.019 6.4E-07 49.9 9.6 99 26-139 187-296 (376)
340 1boo_A Protein (N-4 cytosine-s 96.3 0.0061 2.1E-07 52.0 6.1 73 21-97 240-312 (323)
341 4eye_A Probable oxidoreductase 96.3 0.012 4.1E-07 50.5 7.9 96 27-139 152-256 (342)
342 1yb5_A Quinone oxidoreductase; 96.2 0.039 1.3E-06 47.5 10.9 94 28-139 164-268 (351)
343 2c0c_A Zinc binding alcohol de 96.2 0.028 9.7E-07 48.5 10.0 98 26-139 155-260 (362)
344 2d8a_A PH0655, probable L-thre 96.2 0.018 6.2E-07 49.4 8.7 97 27-139 161-266 (348)
345 1jvb_A NAD(H)-dependent alcoho 96.2 0.019 6.6E-07 49.2 8.9 99 26-139 162-270 (347)
346 3fbg_A Putative arginate lyase 96.2 0.04 1.4E-06 47.2 10.8 98 25-138 135-246 (346)
347 1eg2_A Modification methylase 96.2 0.0088 3E-07 50.9 6.5 60 20-81 229-291 (319)
348 2c7p_A Modification methylase 96.2 0.016 5.5E-07 49.5 8.0 71 35-114 11-84 (327)
349 1piw_A Hypothetical zinc-type 96.2 0.017 5.7E-07 49.9 8.3 101 26-139 171-275 (360)
350 4dup_A Quinone oxidoreductase; 96.1 0.024 8.2E-07 48.8 9.1 97 27-139 160-264 (353)
351 1g55_A DNA cytosine methyltran 96.1 0.0055 1.9E-07 52.8 4.6 72 36-114 3-81 (343)
352 2j3h_A NADP-dependent oxidored 96.0 0.041 1.4E-06 47.1 10.1 99 24-139 145-254 (345)
353 1zkd_A DUF185; NESG, RPR58, st 96.0 0.073 2.5E-06 46.4 11.4 79 28-112 74-160 (387)
354 3nx4_A Putative oxidoreductase 96.0 0.022 7.6E-07 48.3 8.1 96 28-139 139-240 (324)
355 1rjw_A ADH-HT, alcohol dehydro 96.0 0.02 7E-07 48.9 7.9 97 26-139 156-260 (339)
356 2hcy_A Alcohol dehydrogenase 1 96.0 0.021 7.1E-07 49.0 7.9 97 26-139 161-268 (347)
357 1qor_A Quinone oxidoreductase; 96.0 0.049 1.7E-06 46.2 10.2 94 28-139 134-238 (327)
358 3fwz_A Inner membrane protein 95.9 0.061 2.1E-06 39.6 9.5 90 35-138 7-103 (140)
359 4dvj_A Putative zinc-dependent 95.9 0.048 1.6E-06 47.1 10.1 98 26-139 158-269 (363)
360 4eez_A Alcohol dehydrogenase 1 95.9 0.024 8.1E-07 48.6 8.0 103 25-139 154-262 (348)
361 3gaz_A Alcohol dehydrogenase s 95.9 0.042 1.4E-06 47.0 9.5 93 27-138 143-244 (343)
362 2eih_A Alcohol dehydrogenase; 95.8 0.054 1.8E-06 46.3 9.7 91 30-138 162-263 (343)
363 2j8z_A Quinone oxidoreductase; 95.8 0.059 2E-06 46.3 10.0 96 28-139 156-260 (354)
364 1wly_A CAAR, 2-haloacrylate re 95.7 0.077 2.6E-06 45.1 10.4 94 28-139 139-243 (333)
365 4a2c_A Galactitol-1-phosphate 95.6 0.092 3.1E-06 44.8 10.6 101 24-139 150-259 (346)
366 3tqh_A Quinone oxidoreductase; 95.6 0.093 3.2E-06 44.4 10.3 96 26-138 144-243 (321)
367 2b5w_A Glucose dehydrogenase; 95.5 0.022 7.4E-07 49.2 6.2 94 28-139 160-272 (357)
368 2zb4_A Prostaglandin reductase 95.2 0.12 4.1E-06 44.3 10.1 100 23-139 147-259 (357)
369 3krt_A Crotonyl COA reductase; 95.2 0.12 4.1E-06 46.1 10.2 94 30-139 224-343 (456)
370 2dq4_A L-threonine 3-dehydroge 95.1 0.0032 1.1E-07 54.1 -0.4 94 29-139 160-261 (343)
371 3qv2_A 5-cytosine DNA methyltr 95.1 0.072 2.5E-06 45.4 8.1 72 35-114 10-89 (327)
372 1xa0_A Putative NADPH dependen 95.1 0.025 8.4E-07 48.1 5.1 96 28-139 142-245 (328)
373 3pvc_A TRNA 5-methylaminomethy 95.0 0.014 4.7E-07 55.1 3.6 131 6-137 27-208 (689)
374 2qrv_A DNA (cytosine-5)-methyl 95.0 0.12 4E-06 43.5 8.8 73 33-112 14-94 (295)
375 1tt7_A YHFP; alcohol dehydroge 94.9 0.026 8.7E-07 48.0 4.6 96 28-139 143-246 (330)
376 3gqv_A Enoyl reductase; medium 94.8 0.22 7.6E-06 43.0 10.5 91 33-139 163-262 (371)
377 2cdc_A Glucose dehydrogenase g 94.7 0.1 3.4E-06 45.1 8.2 92 29-139 166-277 (366)
378 1iz0_A Quinone oxidoreductase; 94.7 0.054 1.8E-06 45.4 6.2 93 29-139 121-217 (302)
379 3l9w_A Glutathione-regulated p 94.7 0.12 3.9E-06 45.7 8.5 92 35-139 4-101 (413)
380 3c85_A Putative glutathione-re 94.7 0.21 7.1E-06 38.3 9.1 91 35-138 39-137 (183)
381 3ps9_A TRNA 5-methylaminomethy 94.6 0.15 5E-06 47.9 9.6 130 7-137 36-216 (676)
382 2zwa_A Leucine carboxyl methyl 94.6 1.8 6.2E-05 40.6 17.0 158 34-195 107-312 (695)
383 3ubt_Y Modification methylase 94.6 0.19 6.5E-06 42.6 9.4 70 36-113 1-73 (331)
384 2cf5_A Atccad5, CAD, cinnamyl 94.5 0.054 1.9E-06 46.6 5.8 100 26-139 171-274 (357)
385 4f3n_A Uncharacterized ACR, CO 94.4 0.25 8.5E-06 43.6 9.9 45 35-79 138-188 (432)
386 4h0n_A DNMT2; SAH binding, tra 94.3 0.071 2.4E-06 45.6 6.0 70 36-112 4-80 (333)
387 2vn8_A Reticulon-4-interacting 94.2 0.25 8.4E-06 42.7 9.5 92 32-138 181-278 (375)
388 4a0s_A Octenoyl-COA reductase/ 94.2 0.049 1.7E-06 48.4 5.1 97 30-139 216-335 (447)
389 3llv_A Exopolyphosphatase-rela 94.2 0.34 1.2E-05 35.3 9.1 89 35-138 6-101 (141)
390 4dcm_A Ribosomal RNA large sub 94.2 0.45 1.5E-05 41.3 11.0 98 34-140 38-136 (375)
391 2zig_A TTHA0409, putative modi 94.2 0.025 8.7E-07 47.5 3.0 56 84-139 20-96 (297)
392 1yqd_A Sinapyl alcohol dehydro 94.1 0.12 4.1E-06 44.6 7.3 100 26-139 178-281 (366)
393 3iht_A S-adenosyl-L-methionine 93.9 0.14 4.6E-06 38.4 6.0 112 17-138 24-145 (174)
394 1zsy_A Mitochondrial 2-enoyl t 93.7 0.21 7.1E-06 42.9 8.0 95 28-138 161-268 (357)
395 1lss_A TRK system potassium up 93.2 1.6 5.6E-05 31.1 11.4 90 35-138 4-100 (140)
396 3l4b_C TRKA K+ channel protien 93.0 1.1 3.8E-05 35.2 10.7 88 37-138 2-97 (218)
397 3ius_A Uncharacterized conserv 92.9 1.4 4.9E-05 35.8 11.7 92 36-138 6-100 (286)
398 1id1_A Putative potassium chan 92.6 1.1 3.7E-05 33.1 9.6 92 35-138 3-103 (153)
399 3pxx_A Carveol dehydrogenase; 92.6 2.1 7.3E-05 34.9 12.3 103 34-139 9-152 (287)
400 2g1u_A Hypothetical protein TM 92.5 0.25 8.6E-06 36.8 5.9 94 33-138 17-116 (155)
401 3pi7_A NADH oxidoreductase; gr 92.4 0.2 7E-06 42.8 5.9 97 26-139 156-262 (349)
402 3grk_A Enoyl-(acyl-carrier-pro 92.1 2.7 9.2E-05 34.7 12.4 104 33-140 29-169 (293)
403 3ce6_A Adenosylhomocysteinase; 92.0 0.48 1.6E-05 42.7 7.9 88 32-138 271-359 (494)
404 3oig_A Enoyl-[acyl-carrier-pro 91.9 2 6.8E-05 34.7 11.2 105 34-140 6-147 (266)
405 1boo_A Protein (N-4 cytosine-s 91.3 0.14 4.7E-06 43.6 3.6 57 84-140 13-84 (323)
406 1gu7_A Enoyl-[acyl-carrier-pro 91.3 0.22 7.6E-06 42.7 4.9 97 30-138 162-273 (364)
407 4a27_A Synaptic vesicle membra 90.9 0.48 1.6E-05 40.4 6.6 95 26-139 134-237 (349)
408 4eso_A Putative oxidoreductase 90.9 1.3 4.4E-05 35.8 9.0 100 34-139 7-137 (255)
409 3ijr_A Oxidoreductase, short c 90.7 3.3 0.00011 34.1 11.5 103 34-139 46-181 (291)
410 3ek2_A Enoyl-(acyl-carrier-pro 90.7 1.2 3.9E-05 36.2 8.6 105 32-140 11-153 (271)
411 3me5_A Cytosine-specific methy 90.6 0.21 7.3E-06 44.8 4.2 76 35-114 88-182 (482)
412 4g81_D Putative hexonate dehyd 90.5 1.9 6.6E-05 35.1 9.6 75 34-111 8-96 (255)
413 1pjc_A Protein (L-alanine dehy 90.3 0.19 6.5E-06 43.4 3.6 98 34-138 166-265 (361)
414 2vhw_A Alanine dehydrogenase; 90.3 0.19 6.4E-06 43.7 3.5 98 34-138 167-266 (377)
415 1h2b_A Alcohol dehydrogenase; 90.2 0.79 2.7E-05 39.2 7.4 95 30-139 182-284 (359)
416 3ggo_A Prephenate dehydrogenas 90.0 2.8 9.4E-05 35.2 10.5 88 35-137 33-125 (314)
417 2eez_A Alanine dehydrogenase; 90.0 0.33 1.1E-05 41.9 4.9 98 34-138 165-264 (369)
418 3v2g_A 3-oxoacyl-[acyl-carrier 89.8 5.9 0.0002 32.2 12.2 112 24-139 21-164 (271)
419 3p2y_A Alanine dehydrogenase/p 89.7 0.11 3.8E-06 45.1 1.5 42 34-75 183-225 (381)
420 1wma_A Carbonyl reductase [NAD 89.5 2.3 7.8E-05 34.2 9.5 103 34-139 3-137 (276)
421 3r3s_A Oxidoreductase; structu 89.3 3.8 0.00013 33.8 10.8 103 34-139 48-184 (294)
422 3edm_A Short chain dehydrogena 89.3 2.3 7.9E-05 34.3 9.3 103 34-139 7-142 (259)
423 3is3_A 17BETA-hydroxysteroid d 89.2 4 0.00014 33.1 10.7 105 34-141 17-153 (270)
424 4fn4_A Short chain dehydrogena 89.1 2.7 9.1E-05 34.2 9.4 74 34-110 6-93 (254)
425 1lnq_A MTHK channels, potassiu 88.8 2.1 7.2E-05 36.1 9.0 88 35-139 115-210 (336)
426 2aef_A Calcium-gated potassium 88.8 1.8 6.2E-05 34.4 8.1 88 34-138 8-103 (234)
427 3lyl_A 3-oxoacyl-(acyl-carrier 88.7 5.2 0.00018 31.7 10.9 75 34-111 4-92 (247)
428 4dio_A NAD(P) transhydrogenase 88.3 0.18 6.2E-06 44.2 1.9 42 34-75 189-231 (405)
429 4fgs_A Probable dehydrogenase 88.2 3.9 0.00013 33.6 9.9 100 34-139 28-158 (273)
430 3k31_A Enoyl-(acyl-carrier-pro 88.1 3.8 0.00013 33.8 10.0 103 34-140 29-168 (296)
431 2rir_A Dipicolinate synthase, 88.0 2.1 7E-05 35.7 8.2 87 33-137 155-243 (300)
432 3d4o_A Dipicolinate synthase s 87.8 2.5 8.6E-05 35.0 8.7 95 26-138 145-242 (293)
433 1l7d_A Nicotinamide nucleotide 87.7 0.25 8.5E-06 43.0 2.4 42 34-75 171-213 (384)
434 2vz8_A Fatty acid synthase; tr 87.6 0.62 2.1E-05 50.3 5.7 99 28-138 1661-1768(2512)
435 2f1k_A Prephenate dehydrogenas 87.4 6.4 0.00022 31.9 10.9 85 37-137 2-88 (279)
436 4hp8_A 2-deoxy-D-gluconate 3-d 87.0 6.6 0.00023 31.7 10.5 72 34-110 8-88 (247)
437 3ew7_A LMO0794 protein; Q8Y8U8 87.0 8.8 0.0003 29.5 11.7 94 36-139 1-101 (221)
438 3ic5_A Putative saccharopine d 86.9 2.3 7.9E-05 29.2 6.9 66 34-109 4-77 (118)
439 3k96_A Glycerol-3-phosphate de 86.3 3 0.0001 35.7 8.5 94 35-137 29-130 (356)
440 3b1f_A Putative prephenate deh 86.2 8 0.00027 31.6 10.9 88 36-137 7-98 (290)
441 3gvp_A Adenosylhomocysteinase 85.7 1.3 4.5E-05 39.0 5.9 96 24-138 208-305 (435)
442 4g65_A TRK system potassium up 85.7 2.8 9.5E-05 37.3 8.2 90 35-138 3-100 (461)
443 3t4x_A Oxidoreductase, short c 85.3 3.7 0.00013 33.2 8.3 77 34-111 9-95 (267)
444 2g5c_A Prephenate dehydrogenas 85.1 8.7 0.0003 31.2 10.6 88 36-138 2-94 (281)
445 3hwr_A 2-dehydropantoate 2-red 84.9 5.2 0.00018 33.5 9.2 91 34-138 18-118 (318)
446 3ksu_A 3-oxoacyl-acyl carrier 84.9 5.4 0.00018 32.2 9.1 103 34-139 10-146 (262)
447 3ado_A Lambda-crystallin; L-gu 84.8 3 0.0001 35.2 7.6 103 34-143 5-126 (319)
448 3swr_A DNA (cytosine-5)-methyl 84.7 3 0.0001 40.9 8.4 74 34-114 539-631 (1002)
449 2ew2_A 2-dehydropantoate 2-red 84.7 15 0.00052 30.0 13.2 89 36-138 4-106 (316)
450 1xg5_A ARPG836; short chain de 84.5 6.2 0.00021 32.0 9.4 77 34-111 31-121 (279)
451 1qsg_A Enoyl-[acyl-carrier-pro 84.5 5.6 0.00019 32.0 9.0 75 34-111 8-97 (265)
452 1g60_A Adenine-specific methyl 84.4 0.38 1.3E-05 39.3 1.8 54 86-139 5-73 (260)
453 3qiv_A Short-chain dehydrogena 84.3 6.1 0.00021 31.4 9.1 75 34-111 8-96 (253)
454 3ucx_A Short chain dehydrogena 84.3 6.6 0.00023 31.6 9.4 74 34-110 10-97 (264)
455 1g0o_A Trihydroxynaphthalene r 84.3 9.1 0.00031 31.1 10.3 103 34-139 28-162 (283)
456 3ioy_A Short-chain dehydrogena 84.3 5 0.00017 33.5 8.8 77 34-111 7-97 (319)
457 2hwk_A Helicase NSP2; rossman 83.9 2 6.9E-05 35.5 5.8 55 90-144 195-258 (320)
458 3n58_A Adenosylhomocysteinase; 83.7 2.9 0.0001 37.0 7.2 97 23-138 234-332 (464)
459 3u5t_A 3-oxoacyl-[acyl-carrier 83.7 7.2 0.00025 31.6 9.4 103 34-139 26-160 (267)
460 3h2s_A Putative NADH-flavin re 83.6 8.4 0.00029 29.8 9.5 95 36-139 1-103 (224)
461 1eg2_A Modification methylase 83.4 0.58 2E-05 39.6 2.6 56 85-140 38-106 (319)
462 3tjr_A Short chain dehydrogena 83.4 7.2 0.00025 32.2 9.4 76 33-111 29-118 (301)
463 3c24_A Putative oxidoreductase 83.2 16 0.00055 29.7 11.4 84 36-137 12-98 (286)
464 3h7a_A Short chain dehydrogena 83.0 3.9 0.00013 32.8 7.4 75 34-111 6-93 (252)
465 3gaf_A 7-alpha-hydroxysteroid 82.9 6.7 0.00023 31.4 8.9 75 34-111 11-99 (256)
466 3slk_A Polyketide synthase ext 82.5 0.21 7.1E-06 47.9 -0.6 93 29-139 340-441 (795)
467 2hmt_A YUAA protein; RCK, KTN, 82.1 2.5 8.5E-05 30.2 5.4 89 35-138 6-102 (144)
468 3rkr_A Short chain oxidoreduct 82.1 6.7 0.00023 31.5 8.5 76 33-111 27-116 (262)
469 3sju_A Keto reductase; short-c 81.6 7.8 0.00027 31.5 8.8 75 34-111 23-111 (279)
470 3d1l_A Putative NADP oxidoredu 81.6 15 0.0005 29.5 10.5 87 35-137 10-99 (266)
471 3f9i_A 3-oxoacyl-[acyl-carrier 81.4 8.8 0.0003 30.4 9.0 73 33-111 12-94 (249)
472 3nyw_A Putative oxidoreductase 81.3 9.5 0.00032 30.4 9.1 77 34-111 6-97 (250)
473 3tfo_A Putative 3-oxoacyl-(acy 81.1 7.5 0.00026 31.5 8.5 75 34-111 3-91 (264)
474 3zwc_A Peroxisomal bifunctiona 81.1 22 0.00076 33.6 12.6 152 36-196 317-499 (742)
475 1zcj_A Peroxisomal bifunctiona 81.1 24 0.00081 31.2 12.3 95 36-138 38-148 (463)
476 3lf2_A Short chain oxidoreduct 81.0 11 0.00037 30.4 9.4 77 34-111 7-97 (265)
477 3rku_A Oxidoreductase YMR226C; 80.7 9.6 0.00033 31.2 9.1 77 34-111 32-125 (287)
478 2p91_A Enoyl-[acyl-carrier-pro 80.6 13 0.00046 30.1 10.0 75 34-111 20-109 (285)
479 2i6t_A Ubiquitin-conjugating e 80.6 19 0.00067 29.8 11.0 96 34-138 13-123 (303)
480 3o38_A Short chain dehydrogena 80.5 8.2 0.00028 31.0 8.6 76 34-111 21-111 (266)
481 3awd_A GOX2181, putative polyo 80.4 11 0.00039 29.8 9.4 75 34-111 12-100 (260)
482 3h9u_A Adenosylhomocysteinase; 80.4 4.9 0.00017 35.4 7.4 96 23-137 198-295 (436)
483 1yb1_A 17-beta-hydroxysteroid 80.3 11 0.00039 30.3 9.4 75 34-111 30-118 (272)
484 2pd4_A Enoyl-[acyl-carrier-pro 80.3 8.9 0.00031 31.0 8.7 104 34-140 5-144 (275)
485 2cvz_A Dehydrogenase, 3-hydrox 80.1 6.7 0.00023 31.9 8.0 83 37-137 3-87 (289)
486 1hdc_A 3-alpha, 20 beta-hydrox 79.9 6.9 0.00024 31.3 7.9 72 34-111 4-89 (254)
487 3g0o_A 3-hydroxyisobutyrate de 79.9 11 0.00038 31.1 9.3 87 35-137 7-99 (303)
488 1iy8_A Levodione reductase; ox 79.8 13 0.00043 29.9 9.5 77 34-111 12-102 (267)
489 3imf_A Short chain dehydrogena 79.8 5.8 0.0002 31.8 7.4 74 34-110 5-92 (257)
490 2jah_A Clavulanic acid dehydro 79.7 13 0.00045 29.5 9.4 75 34-111 6-94 (247)
491 1y1p_A ARII, aldehyde reductas 79.2 19 0.00063 29.7 10.6 78 33-112 9-94 (342)
492 3v8b_A Putative dehydrogenase, 79.2 9.5 0.00032 31.1 8.6 75 34-111 27-115 (283)
493 3t7c_A Carveol dehydrogenase; 79.2 13 0.00044 30.6 9.5 75 34-111 27-127 (299)
494 2cfc_A 2-(R)-hydroxypropyl-COM 79.0 8.7 0.0003 30.3 8.2 73 35-110 2-89 (250)
495 3svt_A Short-chain type dehydr 79.0 12 0.0004 30.4 9.1 77 34-111 10-101 (281)
496 2rhc_B Actinorhodin polyketide 78.9 13 0.00046 30.0 9.4 75 34-111 21-109 (277)
497 3e8x_A Putative NAD-dependent 78.7 8.5 0.00029 30.1 8.0 70 34-112 20-95 (236)
498 4e12_A Diketoreductase; oxidor 78.7 14 0.00048 30.2 9.5 93 36-137 5-118 (283)
499 3sx2_A Putative 3-ketoacyl-(ac 78.6 13 0.00044 30.0 9.2 76 34-112 12-113 (278)
500 3o26_A Salutaridine reductase; 78.5 10 0.00035 30.9 8.7 77 34-112 11-102 (311)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=100.00 E-value=1.7e-42 Score=298.24 Aligned_cols=248 Identities=29% Similarity=0.484 Sum_probs=224.9
Q ss_pred CcccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc
Q 024096 1 MTYSCAIFKSEHEDLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA 80 (272)
Q Consensus 1 ~~y~~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~ 80 (272)
|+|+|++|..++.+++++|...++.+++.+.+.++.+|||||||+|.++..+++..+++|+|+|+|+.+++.+++++...
T Consensus 39 ~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~ 118 (302)
T 3hem_A 39 MTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV 118 (302)
T ss_dssp CCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS
T ss_pred CceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999999999999985689999999999999999999999
Q ss_pred CCCCCeEEEEcccCCCCCCCCccEEEEechhhcc-------ChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC
Q 024096 81 GLQDHIRFYLCDYRQLPKANKYDRIISCGMIEHV-------GHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL 153 (272)
Q Consensus 81 g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~~-------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 153 (272)
++++++++.++|+.++ +++||+|++..+++|+ +.++...+++++.++|||||++++.++..+.........
T Consensus 119 ~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 196 (302)
T 3hem_A 119 DSPRRKEVRIQGWEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELG 196 (302)
T ss_dssp CCSSCEEEEECCGGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHT
T ss_pred CCCCceEEEECCHHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhcc
Confidence 9888999999999887 5899999999999999 446778999999999999999999988866543221111
Q ss_pred c---------chhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhHHHHHhccCChHHH
Q 024096 154 S---------PGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQSEILALGFNEKFI 224 (272)
Q Consensus 154 ~---------~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (272)
. ..++..+++|++.+++.+++.+.+ +++||+++.+++++.+|..++..|.+++.++.+++... +++++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l-~~aGf~~~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~-~~~~~~ 274 (302)
T 3hem_A 197 LTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYS-SNAGWKVERYHRIGANYVPTLNAWADALQAHKDEAIAL-KGQETC 274 (302)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHH-HHHTCEEEEEEECGGGHHHHHHHHHHHHHHTHHHHHHH-HCHHHH
T ss_pred ccccccccchHHHHHHhcCCCCCCCCHHHHHHHH-HhCCcEEEEEEeCchhHHHHHHHHHHHHHHhHHHHHHH-hCHHHH
Confidence 1 267888999999999999988654 56999999999999999999999999999999999887 899999
Q ss_pred HHHHHHHHHHHHHHhcCCccEEEEEEEe
Q 024096 225 RTWEYYFDYCAASFKSRIIGDYQIVFSR 252 (272)
Q Consensus 225 ~~w~~~~~~~~~~f~~g~~~~~~~~~~k 252 (272)
++|++|+.+|+++|+.|.++.+||+++|
T Consensus 275 ~~w~~yl~~~~~~f~~~~~~~~q~~~~~ 302 (302)
T 3hem_A 275 DIYMHYLRGCSDLFRDKYTDVCQFTLVK 302 (302)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEEEC
Confidence 9999999999999999999999999987
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=100.00 E-value=5.6e-40 Score=280.35 Aligned_cols=248 Identities=29% Similarity=0.520 Sum_probs=220.5
Q ss_pred CcccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc
Q 024096 1 MTYSCAIFKSEHEDLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA 80 (272)
Q Consensus 1 ~~y~~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~ 80 (272)
|.|++++|..+..++.++|...++.+++.+++.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.+++++...
T Consensus 31 ~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~ 110 (287)
T 1kpg_A 31 QTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS 110 (287)
T ss_dssp CCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc
Confidence 67999999999999999999999999999999999999999999999999999665779999999999999999999988
Q ss_pred CCCCCeEEEEcccCCCCCCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccc---------cc
Q 024096 81 GLQDHIRFYLCDYRQLPKANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYD---------EY 151 (272)
Q Consensus 81 g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---------~~ 151 (272)
++.+++.+.++|+.+++ ++||+|++..+++|+++++...+++++.++|||||++++.++..+..... ..
T Consensus 111 ~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (287)
T 1kpg_A 111 ENLRSKRVLLAGWEQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTF 188 (287)
T ss_dssp CCCSCEEEEESCGGGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHH
T ss_pred CCCCCeEEEECChhhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccc
Confidence 88779999999998876 88999999999999987778999999999999999999988875543210 00
Q ss_pred cCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhHHHHHhccCChHHHHHHHHHH
Q 024096 152 RLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQSEILALGFNEKFIRTWEYYF 231 (272)
Q Consensus 152 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~~ 231 (272)
.....++..+++|++.+++.+++.+ +++++||+++++.+++.+|..++..|..++.++++++... +++.+.+.|..|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~s~~~~~~-~l~~aGf~~~~~~~~~~~y~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~l 266 (287)
T 1kpg_A 189 ARFLKFIVTEIFPGGRLPSIPMVQE-CASANGFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIAL-QSEEVYERYMKYL 266 (287)
T ss_dssp HHHHHHHHHHTSTTCCCCCHHHHHH-HHHTTTCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHH
T ss_pred cchhhhHHheeCCCCCCCCHHHHHH-HHHhCCcEEEEEEeCcHhHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHHHHHH
Confidence 1233456778899999999999985 4556999999999999999999999999999999998876 5677778899999
Q ss_pred HHHHHHHhcCCccEEEEEEEe
Q 024096 232 DYCAASFKSRIIGDYQIVFSR 252 (272)
Q Consensus 232 ~~~~~~f~~g~~~~~~~~~~k 252 (272)
..|+++|+.|.++++||+++|
T Consensus 267 ~~~~~~f~~g~~~~~~~~~~k 287 (287)
T 1kpg_A 267 TGCAEMFRIGYIDVNQFTCQK 287 (287)
T ss_dssp HHHHHHHHTTSEEEEEEEEEC
T ss_pred HHHHHHHhCCCCeEEEEEEEC
Confidence 999999999999999999987
No 3
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=100.00 E-value=4.1e-38 Score=272.70 Aligned_cols=251 Identities=27% Similarity=0.466 Sum_probs=223.5
Q ss_pred CcccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc
Q 024096 1 MTYSCAIFKSEHEDLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA 80 (272)
Q Consensus 1 ~~y~~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~ 80 (272)
|.|++++|..+..++.++|...++.+++.+++.++.+|||+|||+|.++..+++..+++|+|+|+|+.+++.++++....
T Consensus 57 ~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~ 136 (318)
T 2fk8_A 57 RTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASI 136 (318)
T ss_dssp CCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTS
T ss_pred CCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 57999999999999999999999999999999999999999999999999999875789999999999999999999988
Q ss_pred CCCCCeEEEEcccCCCCCCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccc---------
Q 024096 81 GLQDHIRFYLCDYRQLPKANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEY--------- 151 (272)
Q Consensus 81 g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--------- 151 (272)
++.+++.+.++|+.+++ ++||+|++..+++|++++++..+++++.++|||||++++.++..+.......
T Consensus 137 ~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 214 (318)
T 2fk8_A 137 DTNRSRQVLLQGWEDFA--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFET 214 (318)
T ss_dssp CCSSCEEEEESCGGGCC--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHH
T ss_pred CCCCceEEEECChHHCC--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccc
Confidence 88778999999998886 7899999999999998878899999999999999999999887655321100
Q ss_pred cCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhHHHHHhccCChHHHHHHHHHH
Q 024096 152 RLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQSEILALGFNEKFIRTWEYYF 231 (272)
Q Consensus 152 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~~ 231 (272)
.....++..+++|++.+++.+++.+.+ +++||+++++.+++.+|..++..|..++...++++... +++.+.++|..|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~s~~~~~~~l-~~aGf~~~~~~~~~~~y~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~l 292 (318)
T 2fk8_A 215 ARFIKFIVTEIFPGGRLPSTEMMVEHG-EKAGFTVPEPLSLRPHYIKTLRIWGDTLQSNKDKAIEV-TSEEVYNRYMKYL 292 (318)
T ss_dssp HHHHHHHHHHTSTTCCCCCHHHHHHHH-HHTTCBCCCCEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHH
T ss_pred cchhhHHHHhcCCCCcCCCHHHHHHHH-HhCCCEEEEEEecchhHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHHHHHH
Confidence 012256677888989999999998554 56999999999999999999999999999999888776 5899999999999
Q ss_pred HHHHHHHhcCCccEEEEEEEeCCC
Q 024096 232 DYCAASFKSRIIGDYQIVFSRPGK 255 (272)
Q Consensus 232 ~~~~~~f~~g~~~~~~~~~~k~~~ 255 (272)
..|+++|+.|.++++|++++||+.
T Consensus 293 ~~~~~~f~~g~~~~~~~~~~k~~~ 316 (318)
T 2fk8_A 293 RGCEHYFTDEMLDCSLVTYLKPGA 316 (318)
T ss_dssp HHHHHHHHTTSCEEEEEEEECTTC
T ss_pred HHHHHHHHCCCCeEEEEEEEeCCC
Confidence 999999999999999999999864
No 4
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=100.00 E-value=5.2e-32 Score=229.21 Aligned_cols=243 Identities=16% Similarity=0.189 Sum_probs=197.6
Q ss_pred ccccccCCCC--CCHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc
Q 024096 3 YSCAIFKSEH--EDLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA 80 (272)
Q Consensus 3 y~~~~~~~~~--~~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~ 80 (272)
+.++||.... .++.+++....+.+++.+++.++.+|||+|||+|.++..+++..+.+++|+|+|+.+++.+++++...
T Consensus 28 ~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 107 (273)
T 3bus_A 28 LHFGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAA 107 (273)
T ss_dssp CCCCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHT
T ss_pred ceEEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 4678998766 69999999999999999999999999999999999999999876789999999999999999999998
Q ss_pred CCCCCeEEEEcccCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhh
Q 024096 81 GLQDHIRFYLCDYRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIK 159 (272)
Q Consensus 81 g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 159 (272)
++++++.++++|+.+++ ++++||+|++..+++|++ +...+++++.++|||||++++.++................+.
T Consensus 108 ~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~ 185 (273)
T 3bus_A 108 GLANRVTFSYADAMDLPFEDASFDAVWALESLHHMP--DRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFR 185 (273)
T ss_dssp TCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSS--CHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred CCCcceEEEECccccCCCCCCCccEEEEechhhhCC--CHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHH
Confidence 88788999999999988 568999999999999995 458999999999999999999887654322111110011111
Q ss_pred hcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhHHHHHhccCChHHHHHHHHHHHHHHHHHh
Q 024096 160 EYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQSEILALGFNEKFIRTWEYYFDYCAASFK 239 (272)
Q Consensus 160 ~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~~~~~~~~f~ 239 (272)
..++...+++.+++.+ +++++||+++.+++++.++..++..|.+++.+....+... +++...+.|.. .+...+.
T Consensus 186 -~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~ 259 (273)
T 3bus_A 186 -AGGGVLSLGGIDEYES-DVRQAELVVTSTVDISAQARPSLVKTAEAFENARSQVEPF-MGAEGLDRMIA---TFRGLAE 259 (273)
T ss_dssp -HHHTCCCCCCHHHHHH-HHHHTTCEEEEEEECHHHHTTHHHHHHHHHHHTHHHHHHH-HCHHHHHHHHH---HHHHHHT
T ss_pred -hhcCccCCCCHHHHHH-HHHHcCCeEEEEEECcHhHHHHHHHHHHHHHHhHHHHHhh-cCHHHHHHHHH---HHHHHhh
Confidence 2234567788888875 4556999999999999999889999999998877766543 56655555443 3334578
Q ss_pred cCCccEEEEEEEeC
Q 024096 240 SRIIGDYQIVFSRP 253 (272)
Q Consensus 240 ~g~~~~~~~~~~k~ 253 (272)
.+.+++++++++||
T Consensus 260 ~~~~~~~~~~~~kp 273 (273)
T 3bus_A 260 VPEAGYVLIGARKP 273 (273)
T ss_dssp CTTEEEEEEEEECC
T ss_pred CCCeeEEEEEEECC
Confidence 89999999999997
No 5
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.98 E-value=7.2e-30 Score=218.72 Aligned_cols=245 Identities=18% Similarity=0.226 Sum_probs=195.1
Q ss_pred ccccccCCC--CCCHHHHHHHHHHHHHHHc----CCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHH
Q 024096 3 YSCAIFKSE--HEDLEVGQMRKVSVLIEKA----RVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIK 76 (272)
Q Consensus 3 y~~~~~~~~--~~~l~~aq~~~~~~l~~~l----~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~ 76 (272)
+.+++|... +..+.+++...++.+++.+ .+.++.+|||+|||+|.++..+++..+.+++|+|+|+.+++.++++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~ 124 (297)
T 2o57_A 45 IHVGLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEY 124 (297)
T ss_dssp CCSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH
T ss_pred eEEEecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH
Confidence 346889887 8899999999999999999 8889999999999999999999987677999999999999999999
Q ss_pred HHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcc
Q 024096 77 VREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSP 155 (272)
Q Consensus 77 ~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~ 155 (272)
....++.++++++++|+.+++ ++++||+|++..+++|+++ +..+++++.++|||||++++.++..+...... ...
T Consensus 125 ~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~ 200 (297)
T 2o57_A 125 NNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKS--SIQ 200 (297)
T ss_dssp HHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGG--GGH
T ss_pred HHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchH--HHH
Confidence 998888789999999999988 6789999999999999954 68999999999999999999887754432111 112
Q ss_pred hhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhHHHHHhccCChHHHHHHHHHHHHHH
Q 024096 156 GFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQSEILALGFNEKFIRTWEYYFDYCA 235 (272)
Q Consensus 156 ~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~~~~~~ 235 (272)
.+...+..+ .+.+..++.+ +++++||+++++.+++.............+.....++.. .++..+.+.|...+..+.
T Consensus 201 ~~~~~~~~~--~~~~~~~~~~-~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 276 (297)
T 2o57_A 201 PILDRIKLH--DMGSLGLYRS-LAKECGLVTLRTFSRPDSLVHHYSKVKAELIKRSSEIAS-FCSPEFQANMKRGLEHWI 276 (297)
T ss_dssp HHHHHHTCS--SCCCHHHHHH-HHHHTTEEEEEEEECHHHHHHHHHHHHHHHHHTHHHHTT-TSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--CCCCHHHHHH-HHHHCCCeEEEEEECchhhHHHHHHHHHHHHHhHHHHhc-cCCHHHHHHHHHHHHHHH
Confidence 223333222 3567777764 455699999999887643322222222233333344433 478899999999999999
Q ss_pred HHHhcCCccEEEEEEEeCCC
Q 024096 236 ASFKSRIIGDYQIVFSRPGK 255 (272)
Q Consensus 236 ~~f~~g~~~~~~~~~~k~~~ 255 (272)
..++.|.+++.+++++||..
T Consensus 277 ~~~~~g~~~~~~~~a~Kp~~ 296 (297)
T 2o57_A 277 EGGRAGKLTWGGMLFRKSDK 296 (297)
T ss_dssp HHHHTTSEEEEEEEEEESSC
T ss_pred HhccCCeEEEEEEEEECCCC
Confidence 99999999999999999864
No 6
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.96 E-value=9.4e-28 Score=201.84 Aligned_cols=221 Identities=19% Similarity=0.234 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 19 QMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 19 q~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
.......+++.+.+.++.+|||+|||+|.++..+++..+.+|+|+|+|+.+++.++++.... .+++++++|+.+++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~ 116 (266)
T 3ujc_A 40 GLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEF 116 (266)
T ss_dssp HHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCC
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCC
Confidence 34456778888888899999999999999999999876789999999999999999876543 48999999999988
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccC-CCCCCCHHHHHH
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFP-GGCLPSLGRVTS 176 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~ 176 (272)
++++||+|++..+++|++.+++..+++++.++|||||++++.++..+... .....+..+..+ +..+++.+++.+
T Consensus 117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (266)
T 3ujc_A 117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE-----NWDDEFKEYVKQRKYTLITVEEYAD 191 (266)
T ss_dssp CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-----GCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-----cchHHHHHHHhcCCCCCCCHHHHHH
Confidence 67899999999999999888889999999999999999999887655411 111122222222 234677888875
Q ss_pred HhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhHHHHHhccCChHHHHH----HHHHHHHHHHHHhcCCccEEEEEEEe
Q 024096 177 AMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQSEILALGFNEKFIRT----WEYYFDYCAASFKSRIIGDYQIVFSR 252 (272)
Q Consensus 177 ~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----w~~~~~~~~~~f~~g~~~~~~~~~~k 252 (272)
+++++||+++++.+++.+|..++..|.+++....+++... +++...+. |..++..|. .|.+++..++++|
T Consensus 192 -~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~g~~~w~~~~~~K 265 (266)
T 3ujc_A 192 -ILTACNFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKL-FSEKKFISLDDGWSRKIKDSK----RKMQRWGYFKATK 265 (266)
T ss_dssp -HHHHTTCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEEEC
T ss_pred -HHHHcCCeEEEEEeCCHHHHHHHHHHHHHHHhCHHHHHHh-cCHHHHHHHHHHHHHHHHHHH----cCcccceEEEEeC
Confidence 4556999999999999999999999999999888887765 55554444 777776554 5789999999999
Q ss_pred C
Q 024096 253 P 253 (272)
Q Consensus 253 ~ 253 (272)
|
T Consensus 266 p 266 (266)
T 3ujc_A 266 N 266 (266)
T ss_dssp C
T ss_pred C
Confidence 7
No 7
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.95 E-value=6.5e-27 Score=201.89 Aligned_cols=222 Identities=18% Similarity=0.250 Sum_probs=172.8
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc
Q 024096 2 TYSCAIFKSEHEDLEVGQMRKVSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA 80 (272)
Q Consensus 2 ~y~~~~~~~~~~~l~~aq~~~~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~ 80 (272)
.|+.++|.. ....+....+.+++.+. +.++.+|||+|||+|.++..+++..+++|+|+|+++.+++.+++++...
T Consensus 88 ~y~~~~f~~----~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~ 163 (312)
T 3vc1_A 88 EYEKKVIAE----LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL 163 (312)
T ss_dssp THHHHHHHH----HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT
T ss_pred ccchHHHhh----hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 455555543 22333444467888887 8899999999999999999999876789999999999999999999999
Q ss_pred CCCCCeEEEEcccCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhh
Q 024096 81 GLQDHIRFYLCDYRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIK 159 (272)
Q Consensus 81 g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 159 (272)
++.++++++++|+.+++ ++++||+|++..+++|++ ...+++++.++|||||++++.++...... ........++.
T Consensus 164 ~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~ 239 (312)
T 3vc1_A 164 RIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRY-GQPSKWVSQIN 239 (312)
T ss_dssp TCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTT-CSCCHHHHHHH
T ss_pred CCCCceEEEECChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccc-cchhHHHHHHH
Confidence 98889999999999988 668999999999999993 68999999999999999999887654422 11112223333
Q ss_pred hcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhHHHHHhccCChHHHHHHHHHHHHHHHHHh
Q 024096 160 EYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQSEILALGFNEKFIRTWEYYFDYCAASFK 239 (272)
Q Consensus 160 ~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~~~~~~~~f~ 239 (272)
....+ .+++.+++.+ +++++||+++.+++++. .+++.|..++... ...|+.+.|.+ .|+
T Consensus 240 ~~~~~--~~~s~~~~~~-~l~~aGf~~~~~~~~~~---~~~~~w~~~~~~~----~~~g~~~~~~~-----------~~~ 298 (312)
T 3vc1_A 240 AHFEC--NIHSRREYLR-AMADNRLVPHTIVDLTP---DTLPYWELRATSS----LVTGIEKAFIE-----------SYR 298 (312)
T ss_dssp HHHTC--CCCBHHHHHH-HHHTTTEEEEEEEECHH---HHHHHHHHHTTST----TCCSCHHHHHH-----------HHH
T ss_pred hhhcC--CCCCHHHHHH-HHHHCCCEEEEEEeCCH---HHHHHHHHHHHHh----hhhcChHHHHH-----------HHH
Confidence 33333 3667888875 45579999999999873 6788999887744 24567666655 556
Q ss_pred cCCccEEEEEEEe
Q 024096 240 SRIIGDYQIVFSR 252 (272)
Q Consensus 240 ~g~~~~~~~~~~k 252 (272)
.|.++++.|+++|
T Consensus 299 ~~~~~y~~i~a~k 311 (312)
T 3vc1_A 299 DGSFQYVLIAADR 311 (312)
T ss_dssp HTSEEEEEEEEEE
T ss_pred hcCCcEEEEEEee
Confidence 7899999999998
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.93 E-value=1.8e-25 Score=188.49 Aligned_cols=213 Identities=15% Similarity=0.157 Sum_probs=159.1
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCC
Q 024096 23 VSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KAN 100 (272)
Q Consensus 23 ~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~ 100 (272)
...+++.+. +.++.+|||||||+|.++..+++.++++|+|+|+|+.+++.+++++...+++++++++++|+.+++ +++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNE 113 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCC
Confidence 445666665 678899999999999999999998667999999999999999999999999888999999999988 678
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhc
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTS 180 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 180 (272)
+||+|++..+++|+ ++..+++++.++|||||++++.++........ .....++... + ..+++..++.+. ++
T Consensus 114 ~fD~i~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~-~--~~~~~~~~~~~~-l~ 184 (267)
T 3kkz_A 114 ELDLIWSEGAIYNI---GFERGLNEWRKYLKKGGYLAVSECSWFTDERP--AEINDFWMDA-Y--PEIDTIPNQVAK-IH 184 (267)
T ss_dssp CEEEEEESSCGGGT---CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCC--HHHHHHHHHH-C--TTCEEHHHHHHH-HH
T ss_pred CEEEEEEcCCceec---CHHHHHHHHHHHcCCCCEEEEEEeeecCCCCh--HHHHHHHHHh-C--CCCCCHHHHHHH-HH
Confidence 99999999999999 35789999999999999999988763322110 0111122111 1 245678888754 45
Q ss_pred CCCcEEEEEEecC-----ccHHHHHHHHHHHHHhh---HHHHHh-ccCChHHHHHHHHHHHHHHHHHhcCCccEEEEEEE
Q 024096 181 SSGLCVEHLENIG-----IHYYQTLRCWRKNFMGK---QSEILA-LGFNEKFIRTWEYYFDYCAASFKSRIIGDYQIVFS 251 (272)
Q Consensus 181 ~~Gf~v~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~-~g~~~~~~~~w~~~~~~~~~~f~~g~~~~~~~~~~ 251 (272)
++||+++++..++ .+|..++..|..++... .+++.. .+....+.+.|..|+. ..++.-++++
T Consensus 185 ~aGf~~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~---------~~~~~f~~~~ 255 (267)
T 3kkz_A 185 KAGYLPVATFILPENCWTDHYFTPKVAAQKIFLTKYAGNKIAEEFSMLQSIEEELYHKYKE---------YYGYTFFIAK 255 (267)
T ss_dssp HTTEEEEEEEECCGGGTTTTTHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTT---------TEEEEEEEEE
T ss_pred HCCCEEEEEEECCHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcc---------ccCeEeehhh
Confidence 6999999998877 67888888888887542 222222 1223444677877643 4566666777
Q ss_pred eC
Q 024096 252 RP 253 (272)
Q Consensus 252 k~ 253 (272)
|.
T Consensus 256 ~~ 257 (267)
T 3kkz_A 256 KI 257 (267)
T ss_dssp EC
T ss_pred HH
Confidence 74
No 9
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.93 E-value=1.3e-25 Score=189.98 Aligned_cols=238 Identities=13% Similarity=0.131 Sum_probs=173.3
Q ss_pred ccccccCC---CCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHcc--CCEEEEEcCCHH------HHH
Q 024096 3 YSCAIFKS---EHEDLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQT--GCKYTGITLSEE------QLK 71 (272)
Q Consensus 3 y~~~~~~~---~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~gvd~s~~------~~~ 71 (272)
|...+..+ ....+..+|......+++.+.+.++.+|||||||+|.++..+++.. ..+++|+|+|+. +++
T Consensus 9 y~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~ 88 (275)
T 3bkx_A 9 ITDLMALGPTANARTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLG 88 (275)
T ss_dssp HHTTSCCCSSTTHHHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHH
T ss_pred HHHhhhcCCCCCchHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHH
Confidence 45555544 3457889999999999999999999999999999999999999873 389999999997 999
Q ss_pred HHHHHHHHcCCCCCeEEEEcc---cCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCc
Q 024096 72 YAEIKVREAGLQDHIRFYLCD---YRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQC 147 (272)
Q Consensus 72 ~a~~~~~~~g~~~~i~~~~~d---~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 147 (272)
.+++++...++.++++++++| ...++ ++++||+|++..+++|+++. ..+++.+.++++|||++++.++..+...
T Consensus 89 ~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~~~~~~~~ 166 (275)
T 3bkx_A 89 QAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAEWSMQPTA 166 (275)
T ss_dssp HHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEEECSSCSS
T ss_pred HHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEEecCCCCc
Confidence 999999888876789999998 33444 56899999999999999654 5678888888888999999988765543
Q ss_pred cccccCcch-hhhhcc---c---CC--CCCCCHHHHHHHhhcCCCcEEEEEEecCccHHHHHH--HHHHHHHhhHHHH-H
Q 024096 148 YDEYRLSPG-FIKEYI---F---PG--GCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQTLR--CWRKNFMGKQSEI-L 215 (272)
Q Consensus 148 ~~~~~~~~~-~~~~~~---~---p~--~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~ 215 (272)
......... ...... . +. ..+++.+++.+. ++++||+++.+..+. ..++. .|...+.....+. .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~-l~~aGf~~~~~~~~~---~~~~~~~~W~~~~~~~~~~~~~ 242 (275)
T 3bkx_A 167 LDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQI-AHDNTWTYTAGTIVE---DPTLDDAHWEIATTNALLTELK 242 (275)
T ss_dssp GGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHH-HHHHTCEEEECCCBC---CTTCTHHHHHHHHHHHHHHHSC
T ss_pred hhhhhHHHHHHHHHHHhhccccccccccccCCHHHHHHH-HHHCCCeeEEEEEec---CCCCCCchhhHHHHHHHHHHHH
Confidence 221111111 111110 0 11 246788888754 556999999887763 34444 7887555443332 2
Q ss_pred h-ccCChHHHHHHHHHHHHHHHHHhcCCccEEEEEEE
Q 024096 216 A-LGFNEKFIRTWEYYFDYCAASFKSRIIGDYQIVFS 251 (272)
Q Consensus 216 ~-~g~~~~~~~~w~~~~~~~~~~f~~g~~~~~~~~~~ 251 (272)
. .||++.++++|..+ |.++ .+.++.+|+++.
T Consensus 243 ~~~g~~~~~~~~~~~~---~~~g--~~~~~~~~~~~~ 274 (275)
T 3bkx_A 243 LSTDLRDRVKPLLEAM---SHNG--TASLATFTGRIT 274 (275)
T ss_dssp CCHHHHHHHHHHHHHH---TTSC--CCCCCEEEEEEE
T ss_pred hhccccHHHHHHHHHH---Hhcc--ccccceeeEEEe
Confidence 2 47899999999983 3333 557888888764
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.92 E-value=3.8e-23 Score=172.97 Aligned_cols=165 Identities=17% Similarity=0.145 Sum_probs=130.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 100 (272)
..+..+++.+.+.++.+|||+|||+|.++..+++..+.+++|+|+|+.+++.+++++...++.+++.++++|+.+++.++
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 44677888888899999999999999999999987678999999999999999999999888778999999999887778
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhccc-CCCCCCCHHHHHHHhh
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIF-PGGCLPSLGRVTSAMT 179 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~l~ 179 (272)
+||+|++..+++|++ ++..+++++.++|||||++++.+......... ..+...+.. ....+.+..++.+ ++
T Consensus 103 ~fD~V~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~l 174 (256)
T 1nkv_A 103 KCDVAACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEPYWRQLPAT-----EEIAQACGVSSTSDFLTLPGLVG-AF 174 (256)
T ss_dssp CEEEEEEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSS-----HHHHHTTTCSCGGGSCCHHHHHH-HH
T ss_pred CCCEEEECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecCcccCCCCh-----HHHHHHHhcccccccCCHHHHHH-HH
Confidence 899999999999995 45899999999999999999987654332110 111111111 1124567778875 45
Q ss_pred cCCCcEEEEEEecC
Q 024096 180 SSSGLCVEHLENIG 193 (272)
Q Consensus 180 ~~~Gf~v~~~~~~~ 193 (272)
+++||.++.+....
T Consensus 175 ~~aGf~~~~~~~~~ 188 (256)
T 1nkv_A 175 DDLGYDVVEMVLAD 188 (256)
T ss_dssp HTTTBCCCEEEECC
T ss_pred HHCCCeeEEEEeCC
Confidence 57999987766544
No 11
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.91 E-value=1.4e-22 Score=169.49 Aligned_cols=163 Identities=15% Similarity=0.158 Sum_probs=128.2
Q ss_pred HHHHHHHHc-CCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CC
Q 024096 22 KVSVLIEKA-RVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KA 99 (272)
Q Consensus 22 ~~~~l~~~l-~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~ 99 (272)
....+++.+ .+.++.+|||+|||+|.++..+++..+.+|+|+|+|+.+++.+++++...+++++++++++|+.+++ ++
T Consensus 33 ~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (257)
T 3f4k_A 33 ATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQN 112 (257)
T ss_dssp HHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCT
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCC
Confidence 345566666 4678899999999999999999998555999999999999999999999999878999999999988 66
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhh
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMT 179 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 179 (272)
++||+|++..+++|+ +...+++++.++|||||++++.+......... .....++... . ..+++.+++.+. +
T Consensus 113 ~~fD~v~~~~~l~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~~~~-~--~~~~~~~~~~~~-l 183 (257)
T 3f4k_A 113 EELDLIWSEGAIYNI---GFERGMNEWSKYLKKGGFIAVSEASWFTSERP--AEIEDFWMDA-Y--PEISVIPTCIDK-M 183 (257)
T ss_dssp TCEEEEEEESCSCCC---CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCC--HHHHHHHHHH-C--TTCCBHHHHHHH-H
T ss_pred CCEEEEEecChHhhc---CHHHHHHHHHHHcCCCcEEEEEEeeccCCCCh--HHHHHHHHHh-C--CCCCCHHHHHHH-H
Confidence 899999999999998 35789999999999999999988653222110 0111112111 1 235678888754 4
Q ss_pred cCCCcEEEEEEecC
Q 024096 180 SSSGLCVEHLENIG 193 (272)
Q Consensus 180 ~~~Gf~v~~~~~~~ 193 (272)
+++||+++....+.
T Consensus 184 ~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 184 ERAGYTPTAHFILP 197 (257)
T ss_dssp HHTTEEEEEEEECC
T ss_pred HHCCCeEEEEEECC
Confidence 56999999888766
No 12
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.91 E-value=1.2e-23 Score=179.04 Aligned_cols=215 Identities=16% Similarity=0.196 Sum_probs=154.1
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KAN 100 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~ 100 (272)
+..+++.+... +.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...++++++.++++|+.+++ .++
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 135 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLET 135 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSS
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCC
Confidence 45667776654 679999999999999999997 88999999999999999999998888778999999999987 678
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccc-cCcchhhhhc-------ccCCCCCCCHH
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEY-RLSPGFIKEY-------IFPGGCLPSLG 172 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-~~~~~~~~~~-------~~p~~~~~~~~ 172 (272)
+||+|++..+++|++ ++..+++++.++|||||++++.++.......... ......+... ........+.+
T Consensus 136 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (285)
T 4htf_A 136 PVDLILFHAVLEWVA--DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPT 213 (285)
T ss_dssp CEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHH
T ss_pred CceEEEECchhhccc--CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHH
Confidence 999999999999994 5589999999999999999998765322110000 0000011000 11112445677
Q ss_pred HHHHHhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCccEEEEEEEe
Q 024096 173 RVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQSEILALGFNEKFIRTWEYYFDYCAASFKSRIIGDYQIVFSR 252 (272)
Q Consensus 173 ~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~~~~~~~~f~~g~~~~~~~~~~k 252 (272)
++.+ +++++||+++++..+..... .|...+. . ...+.+.+...+.+|....-.+...+.+++++|
T Consensus 214 ~l~~-~l~~aGf~v~~~~~~~~~~~----~~~~~~~----~------~~~~~~l~~~e~~~~~~~~~~~~~~~~~~varK 278 (285)
T 4htf_A 214 QVYL-WLEEAGWQIMGKTGVRVFHD----YLREKHQ----Q------RDCYEALLELETRYCRQEPYITLGRYIHVTARK 278 (285)
T ss_dssp HHHH-HHHHTTCEEEEEEEESSSGG----GCSSTTH----H------HHTHHHHHHHHHHHTTSTTGGGGCSEEEEEEEC
T ss_pred HHHH-HHHHCCCceeeeeeEEEeee----ccccccc----C------cccHHHHHHHHHHhcCCChHHHHHhheEEEEEc
Confidence 7764 55569999999888753221 1111000 0 011455677777777777778889999999999
Q ss_pred CCCC
Q 024096 253 PGKV 256 (272)
Q Consensus 253 ~~~~ 256 (272)
|+..
T Consensus 279 ~~~~ 282 (285)
T 4htf_A 279 PQSK 282 (285)
T ss_dssp CCC-
T ss_pred CCcc
Confidence 9653
No 13
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.90 E-value=5.2e-23 Score=172.71 Aligned_cols=185 Identities=18% Similarity=0.210 Sum_probs=135.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc
Q 024096 14 DLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY 93 (272)
Q Consensus 14 ~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~ 93 (272)
+...++...+..+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...+++ ++.++++|+
T Consensus 17 s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~ 94 (260)
T 1vl5_A 17 SQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDA 94 (260)
T ss_dssp ------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC
T ss_pred CccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecH
Confidence 344566666788899998889999999999999999999987 569999999999999999999888875 799999999
Q ss_pred CCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccC-CCCCCCH
Q 024096 94 RQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFP-GGCLPSL 171 (272)
Q Consensus 94 ~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~ 171 (272)
.+++ ++++||+|++..+++|++ ++..+++++.++|||||++++.+...+.... .......+.....+ .....+.
T Consensus 95 ~~l~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 170 (260)
T 1vl5_A 95 EQMPFTDERFHIVTCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNSAPENDA--FDVFYNYVEKERDYSHHRAWKK 170 (260)
T ss_dssp -CCCSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHH--HHHHHHHHHHHHCTTCCCCCBH
T ss_pred HhCCCCCCCEEEEEEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHH--HHHHHHHHHHhcCccccCCCCH
Confidence 9988 668999999999999995 5689999999999999999998776544311 00011111111111 2234567
Q ss_pred HHHHHHhhcCCCcEEEEEEecCccHHHHHHHHHHHH
Q 024096 172 GRVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRKNF 207 (272)
Q Consensus 172 ~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~ 207 (272)
.++.+ +++++||.+..+......+ .+..|.+.+
T Consensus 171 ~~~~~-~l~~aGf~~~~~~~~~~~~--~~~~~~~~~ 203 (260)
T 1vl5_A 171 SDWLK-MLEEAGFELEELHCFHKTF--IFEDWCDRM 203 (260)
T ss_dssp HHHHH-HHHHHTCEEEEEEEEEEEE--EHHHHHHHT
T ss_pred HHHHH-HHHHCCCeEEEEEEeeccC--CHHHHHHhc
Confidence 77764 4556999988877754322 245565544
No 14
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.90 E-value=7.4e-23 Score=173.18 Aligned_cols=188 Identities=19% Similarity=0.277 Sum_probs=128.1
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc
Q 024096 2 TYSCAIFKSEHEDLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREA 80 (272)
Q Consensus 2 ~y~~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~ 80 (272)
.|.++++..+...+..........+.....+.++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.+++++...
T Consensus 5 ~Y~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 84 (276)
T 3mgg_A 5 EYVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN 84 (276)
T ss_dssp ------------------CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT
T ss_pred ccccCCCHHHHhhHHHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 578888888877777766666666666667789999999999999999999998 5789999999999999999999988
Q ss_pred CCCCCeEEEEcccCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccc-cCc----
Q 024096 81 GLQDHIRFYLCDYRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEY-RLS---- 154 (272)
Q Consensus 81 g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-~~~---- 154 (272)
+++ ++.+.++|+.+++ ++++||+|++..+++|++ ++..+++++.++|||||++++.+........... ...
T Consensus 85 ~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 3mgg_A 85 GIK-NVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQ--SPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAW 161 (276)
T ss_dssp TCC-SEEEEECCGGGCCSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHH
T ss_pred CCC-CcEEEEcccccCCCCCCCeeEEEEechhhhcC--CHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHH
Confidence 875 7999999999988 678999999999999995 4579999999999999999997754321110000 000
Q ss_pred chhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 155 PGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 155 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
..+.......++...+..++. .+++++||++++++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~-~~l~~aGf~~v~~~~~~ 199 (276)
T 3mgg_A 162 NCLIRVQAYMKGNSLVGRQIY-PLLQESGFEKIRVEPRM 199 (276)
T ss_dssp HHHHHHHHHTTCCTTGGGGHH-HHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcchHHHHH-HHHHHCCCCeEEEeeEE
Confidence 011111112233334445565 45556999998887654
No 15
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.89 E-value=6.6e-24 Score=176.18 Aligned_cols=169 Identities=18% Similarity=0.243 Sum_probs=133.1
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC--C-CCCCccEEEEe
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL--P-KANKYDRIISC 108 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~--~-~~~~fD~V~~~ 108 (272)
+.++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++ +.++++|+.+. + ++++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 467789999999999999999987 77999999999999998764 68899998775 4 56899999999
Q ss_pred chhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCC-CCCCHHHHHHHhhcCCCcEEE
Q 024096 109 GMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGG-CLPSLGRVTSAMTSSSGLCVE 187 (272)
Q Consensus 109 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~l~~~~Gf~v~ 187 (272)
.+++|+++++...+++++.++|||||++++..+..... ......+..+.. ...+.+++. .+++++||.++
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~-~~l~~aGf~~~ 179 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL--------YSLINFYIDPTHKKPVHPETLK-FILEYLGFRDV 179 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH--------HHHHHHTTSTTCCSCCCHHHHH-HHHHHHTCEEE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh--------HHHHHHhcCccccccCCHHHHH-HHHHHCCCeEE
Confidence 99999987788999999999999999999977653211 122233344433 455667776 45556999999
Q ss_pred EEEecC----------ccHHHHHHHHHHH-HHhhHHHHHhccCC
Q 024096 188 HLENIG----------IHYYQTLRCWRKN-FMGKQSEILALGFN 220 (272)
Q Consensus 188 ~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~g~~ 220 (272)
.+.... .+ ..++..|+++ +.++.+.+...+|+
T Consensus 180 ~~~~~~~~~~~~~l~~~~-~~~l~~w~~~~~~~~~~~~~~~~f~ 222 (240)
T 3dli_A 180 KIEFFEECEELTKLAKID-SNTVSEEVIRVINENIEKLNRILFG 222 (240)
T ss_dssp EEEEECCCCTTTSCCCCC-CSSSCHHHHHHHHHHHHHHHHHHSC
T ss_pred EEEEeccCcccccccccc-cccccHHHHHhhhhhHHHHHhhccC
Confidence 888776 45 5577889988 87777777666554
No 16
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.88 E-value=7.3e-22 Score=165.88 Aligned_cols=114 Identities=16% Similarity=0.230 Sum_probs=103.4
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEe
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISC 108 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~ 108 (272)
++++.+|||+|||+|..+..+++. ++++|+|+|+|+.|++.|++++...+...+++++++|+.+++. +.||+|++.
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~~~d~v~~~ 146 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-ENASMVVLN 146 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-CSEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-cccccceee
Confidence 578999999999999999999986 4679999999999999999999988887899999999999874 469999999
Q ss_pred chhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCC
Q 024096 109 GMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQ 146 (272)
Q Consensus 109 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 146 (272)
.+++|+++++...++++++++|||||++++.+...+..
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~ 184 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFED 184 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSS
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCC
Confidence 99999988888899999999999999999988775543
No 17
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.88 E-value=9.8e-22 Score=163.03 Aligned_cols=181 Identities=19% Similarity=0.244 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 19 QMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 19 q~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
|......+++.+.+.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...+++ ++.++++|+.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~ 83 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPF 83 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCS
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCC
Confidence 4455577888899999999999999999999999986 569999999999999999999888874 7999999999988
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccC-CCCCCCHHHHHH
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFP-GGCLPSLGRVTS 176 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~ 176 (272)
++++||+|++..+++|++ ++..+++++.++|||||++++.+...+.... .......+.....+ .....+.+++.+
T Consensus 84 ~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T 1xxl_A 84 PDDSFDIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPV--LDEFVNHLNRLRDPSHVRESSLSEWQA 159 (239)
T ss_dssp CTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHH--HHHHHHHHHHHHCTTCCCCCBHHHHHH
T ss_pred CCCcEEEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChh--HHHHHHHHHHhccccccCCCCHHHHHH
Confidence 668999999999999994 5689999999999999999998776544311 11111111111111 223456777774
Q ss_pred HhhcCCCcEEEEEEecCccHHHHHHHHHHHHH
Q 024096 177 AMTSSSGLCVEHLENIGIHYYQTLRCWRKNFM 208 (272)
Q Consensus 177 ~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~ 208 (272)
+++++||.++.+......+ ....|.+.+.
T Consensus 160 -ll~~aGf~~~~~~~~~~~~--~~~~w~~~~~ 188 (239)
T 1xxl_A 160 -MFSANQLAYQDIQKWNLPI--QYDSWIKRGG 188 (239)
T ss_dssp -HHHHTTEEEEEEEEEEEEE--EHHHHHHHHT
T ss_pred -HHHHCCCcEEEEEeecCcc--CHHHHHHHcC
Confidence 5556999998877764322 2456766654
No 18
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.86 E-value=5.9e-21 Score=154.58 Aligned_cols=154 Identities=16% Similarity=0.099 Sum_probs=117.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC-----------CCCCeEEEEc
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAG-----------LQDHIRFYLC 91 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g-----------~~~~i~~~~~ 91 (272)
+..+++.+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++..... ...+++++++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 344566677788899999999999999999997 8899999999999999998764210 0247999999
Q ss_pred ccCCCC-CC-CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCC
Q 024096 92 DYRQLP-KA-NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLP 169 (272)
Q Consensus 92 d~~~~~-~~-~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 169 (272)
|+.+++ .+ ++||+|++..+++|++.++...++++++++|||||++++.....+... . ..| ....
T Consensus 90 d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~---~----------~~~-~~~~ 155 (203)
T 1pjz_A 90 DFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL---L----------EGP-PFSV 155 (203)
T ss_dssp CCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS---S----------SSC-CCCC
T ss_pred ccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc---c----------CCC-CCCC
Confidence 999998 33 799999999999999877778899999999999999665544432110 0 000 0123
Q ss_pred CHHHHHHHhhcCCCcEEEEEEecC
Q 024096 170 SLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 170 ~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
+.+++. .+.++ ||++..++...
T Consensus 156 ~~~el~-~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 156 PQTWLH-RVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp CHHHHH-HTSCS-SEEEEEEEESS
T ss_pred CHHHHH-HHhcC-CcEEEEecccc
Confidence 566666 45555 99998887754
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.86 E-value=1e-20 Score=156.06 Aligned_cols=164 Identities=18% Similarity=0.228 Sum_probs=122.9
Q ss_pred HHHHHHcC-CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCC
Q 024096 24 SVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANK 101 (272)
Q Consensus 24 ~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 101 (272)
+.+++.+. ..++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.++++....+ ++.++++|+.+++..++
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~ 109 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEEK 109 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCSC
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCCC
Confidence 45555555 467899999999999999999998 58899999999999999999875543 89999999999885589
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC-------------cchhhhhcc--cCCC
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL-------------SPGFIKEYI--FPGG 166 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-------------~~~~~~~~~--~p~~ 166 (272)
||+|++..+++|+++.+...+++++.++|||||++++.+...+......... ....+.... ....
T Consensus 110 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (234)
T 3dtn_A 110 YDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLD 189 (234)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CC
T ss_pred ceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccc
Confidence 9999999999999877667899999999999999999887765432111000 000000000 0223
Q ss_pred CCCCHHHHHHHhhcCCCcEEEEEEe
Q 024096 167 CLPSLGRVTSAMTSSSGLCVEHLEN 191 (272)
Q Consensus 167 ~~~~~~~~~~~l~~~~Gf~v~~~~~ 191 (272)
...+.+++. .+++++||+++++..
T Consensus 190 ~~~~~~~~~-~ll~~aGF~~v~~~~ 213 (234)
T 3dtn_A 190 KDIEMNQQL-NWLKEAGFRDVSCIY 213 (234)
T ss_dssp CCCBHHHHH-HHHHHTTCEEEEEEE
T ss_pred cccCHHHHH-HHHHHcCCCceeeee
Confidence 445677776 456679999887644
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.85 E-value=3.2e-20 Score=151.53 Aligned_cols=155 Identities=19% Similarity=0.226 Sum_probs=127.1
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KA 99 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~ 99 (272)
...+++.+.+.++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.+++++...+++ ++.+.++|+.+++ ++
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCS
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCC
Confidence 466788888889999999999999999999987 3579999999999999999999988875 7999999999988 66
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhh
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMT 179 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 179 (272)
++||+|++..+++|+ .+...+++++.++|||||++++.++......... +.....+.+++.+ ++
T Consensus 105 ~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-------------~~~~~~~~~~~~~-~l 168 (219)
T 3dh0_A 105 NTVDFIFMAFTFHEL--SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP-------------PPEEVYSEWEVGL-IL 168 (219)
T ss_dssp SCEEEEEEESCGGGC--SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC-------------CGGGSCCHHHHHH-HH
T ss_pred CCeeEEEeehhhhhc--CCHHHHHHHHHHHhCCCeEEEEEEecccccccCC-------------chhcccCHHHHHH-HH
Confidence 889999999999999 4568999999999999999999887654431110 0112346777764 45
Q ss_pred cCCCcEEEEEEecCc
Q 024096 180 SSSGLCVEHLENIGI 194 (272)
Q Consensus 180 ~~~Gf~v~~~~~~~~ 194 (272)
+++||+++.....+.
T Consensus 169 ~~~Gf~~~~~~~~~~ 183 (219)
T 3dh0_A 169 EDAGIRVGRVVEVGK 183 (219)
T ss_dssp HHTTCEEEEEEEETT
T ss_pred HHCCCEEEEEEeeCC
Confidence 569999988877653
No 21
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.85 E-value=1.2e-20 Score=155.91 Aligned_cols=153 Identities=14% Similarity=0.137 Sum_probs=121.6
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
..++..+..++ .+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.++++....+...++.++++|+.+.+++++||
T Consensus 57 ~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 134 (235)
T 3lcc_A 57 VHLVDTSSLPL-GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFD 134 (235)
T ss_dssp HHHHHTTCSCC-EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEE
T ss_pred HHHHHhcCCCC-CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCee
Confidence 33444455444 4999999999999999987 488999999999999999999876555568999999999988777999
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCC
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSG 183 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~G 183 (272)
+|++..+++|+++++...+++++.++|||||++++.++........ . ....+.+++. .+++++|
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-------------~--~~~~~~~~~~-~~l~~~G 198 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGG-------------P--PYKVDVSTFE-EVLVPIG 198 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSC-------------S--SCCCCHHHHH-HHHGGGT
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCC-------------C--CccCCHHHHH-HHHHHcC
Confidence 9999999999987788999999999999999999876653321100 0 0124566676 4556799
Q ss_pred cEEEEEEecCc
Q 024096 184 LCVEHLENIGI 194 (272)
Q Consensus 184 f~v~~~~~~~~ 194 (272)
|+++.++....
T Consensus 199 f~~~~~~~~~~ 209 (235)
T 3lcc_A 199 FKAVSVEENPH 209 (235)
T ss_dssp EEEEEEEECTT
T ss_pred CeEEEEEecCC
Confidence 99999887654
No 22
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.85 E-value=1.9e-21 Score=158.36 Aligned_cols=120 Identities=23% Similarity=0.289 Sum_probs=107.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KA 99 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~ 99 (272)
...+.+++.+...++ +|||+|||+|.++..+++.++.+++|+|+|+.+++.+++++...++.+++.++++|+.+++ ++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 445677778887777 9999999999999999987678999999999999999999999988779999999999988 66
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
++||+|++..+++|+ +++..+++++.++|||||++++.+...
T Consensus 110 ~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 110 NYADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp TCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred ccccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 899999999999999 566899999999999999999976543
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.85 E-value=1.1e-20 Score=154.38 Aligned_cols=125 Identities=18% Similarity=0.283 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCC----CeEEE
Q 024096 15 LEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQD----HIRFY 89 (272)
Q Consensus 15 l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~----~i~~~ 89 (272)
+.......++.+++.+...++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.+++++...++++ ++.++
T Consensus 10 ~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (219)
T 3jwg_A 10 KLNLNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLF 89 (219)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEE
T ss_pred CCcchHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEE
Confidence 33344445566666666567889999999999999999987 44799999999999999999988776654 89999
Q ss_pred EcccCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 90 LCDYRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 90 ~~d~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
++|+...+ .+++||+|++..+++|+++++...+++++.++|||||.++..
T Consensus 90 ~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 90 QSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp ECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred eCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 99997777 568999999999999998777789999999999999966654
No 24
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.85 E-value=1e-20 Score=154.54 Aligned_cols=161 Identities=18% Similarity=0.155 Sum_probs=121.2
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
..+++.+...++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++.. .++.++++|+.+++..++||
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD 108 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSID 108 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCS
T ss_pred HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeE
Confidence 45666666668899999999999999999997 8899999999999999998753 47899999999988448999
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhh-------cccCCCCCCCHHHHHH
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKE-------YIFPGGCLPSLGRVTS 176 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~~~~~~~~~~~ 176 (272)
+|++..+++|+++.....+++++.++|||||++++.++..+...... ........ ...+...+++.+++.
T Consensus 109 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 185 (220)
T 3hnr_A 109 TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYD--KTVEAAKQRGFHQLANDLQTEYYTRIPVMQ- 185 (220)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHH--HHHHHHHHTTCHHHHHHHHHSCCCBHHHHH-
T ss_pred EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHH--HHHHHHHhCCCccchhhcchhhcCCHHHHH-
Confidence 99999999999776555699999999999999999876544321110 00000000 001112456777776
Q ss_pred HhhcCCCcEEEEEEecC
Q 024096 177 AMTSSSGLCVEHLENIG 193 (272)
Q Consensus 177 ~l~~~~Gf~v~~~~~~~ 193 (272)
.+++++||++.......
T Consensus 186 ~~l~~aGf~v~~~~~~~ 202 (220)
T 3hnr_A 186 TIFENNGFHVTFTRLNH 202 (220)
T ss_dssp HHHHHTTEEEEEEECSS
T ss_pred HHHHHCCCEEEEeeccc
Confidence 45567999998776543
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.85 E-value=2.3e-20 Score=152.06 Aligned_cols=165 Identities=18% Similarity=0.210 Sum_probs=122.5
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCC
Q 024096 23 VSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANK 101 (272)
Q Consensus 23 ~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 101 (272)
...+++.+. ..++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++ .+. .++.++++|+.++.++++
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~~~~ 107 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTPDRQ 107 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCCSSC
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCCCCc
Confidence 445666665 677889999999999999999997 8899999999999999987 344 479999999988866789
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC--cchhhhhcccCC------CCCCCHHH
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL--SPGFIKEYIFPG------GCLPSLGR 173 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~--~~~~~~~~~~p~------~~~~~~~~ 173 (272)
||+|++..+++|++++....+++++.++|||||.+++.++..+......... ....+...+..+ ..+++.++
T Consensus 108 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (218)
T 3ou2_A 108 WDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAE 187 (218)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHH
T ss_pred eeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHH
Confidence 9999999999999876678999999999999999999888764432211100 011111111111 23467788
Q ss_pred HHHHhhcCCCcEEEEEEecCc
Q 024096 174 VTSAMTSSSGLCVEHLENIGI 194 (272)
Q Consensus 174 ~~~~l~~~~Gf~v~~~~~~~~ 194 (272)
+.+ +++++||++...+....
T Consensus 188 ~~~-~l~~aGf~v~~~~~~~~ 207 (218)
T 3ou2_A 188 LTE-RLTALGWSCSVDEVHPG 207 (218)
T ss_dssp HHH-HHHHTTEEEEEEEEETT
T ss_pred HHH-HHHHCCCEEEeeecccc
Confidence 874 55569999877665443
No 26
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=3.8e-20 Score=154.80 Aligned_cols=163 Identities=16% Similarity=0.158 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC
Q 024096 19 QMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP 97 (272)
Q Consensus 19 q~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~ 97 (272)
+......+++.+...++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.++++ ..++.++++|+.+++
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~ 91 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK 91 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC
Confidence 4445567888888888999999999999999999987 688999999999999999887 147899999999888
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCcccc-ccCcc---hhhhhcc---cCCCCCCC
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDE-YRLSP---GFIKEYI---FPGGCLPS 170 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-~~~~~---~~~~~~~---~p~~~~~~ 170 (272)
++++||+|++..+++|+ .++..+++++.++|||||++++..+......... ..... .+..... .....+.+
T Consensus 92 ~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (259)
T 2p35_A 92 PAQKADLLYANAVFQWV--PDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPP 169 (259)
T ss_dssp CSSCEEEEEEESCGGGS--TTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCC
T ss_pred ccCCcCEEEEeCchhhC--CCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCC
Confidence 66889999999999999 4568999999999999999999876432211000 00000 0110000 11234567
Q ss_pred HHHHHHHhhcCCCcEEEEEE
Q 024096 171 LGRVTSAMTSSSGLCVEHLE 190 (272)
Q Consensus 171 ~~~~~~~l~~~~Gf~v~~~~ 190 (272)
.+++.+ +++++||.+...+
T Consensus 170 ~~~~~~-~l~~aGf~v~~~~ 188 (259)
T 2p35_A 170 PSDYFN-ALSPKSSRVDVWH 188 (259)
T ss_dssp HHHHHH-HHGGGEEEEEEEE
T ss_pred HHHHHH-HHHhcCCceEEEE
Confidence 777764 5556999765443
No 27
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.84 E-value=1.7e-19 Score=158.96 Aligned_cols=164 Identities=16% Similarity=0.147 Sum_probs=132.3
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANK 101 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 101 (272)
...+++.++..++.+|||+|||+|.++..+++. ++.+++++|+ +.+++.+++++...++.+++++..+|+.+ +.+..
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p~~ 268 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIPDG 268 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCCSS
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCCCC
Confidence 466778888888899999999999999999998 7889999999 99999999999998888899999999983 32238
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcC
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSS 181 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 181 (272)
||+|++..++++++++....+++++++.|+|||++++.+...+...... ..... +......++...+.+++.+ ++++
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d-~~~~~~~~g~~~t~~e~~~-ll~~ 345 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVD-LLLLVLVGGAERSESEFAA-LLEK 345 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHH-HHHHHHHSCCCBCHHHHHH-HHHT
T ss_pred ceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhh-HHHHhhcCCccCCHHHHHH-HHHH
Confidence 9999999999999887777999999999999999999988876543211 00001 1112234566678888874 5567
Q ss_pred CCcEEEEEEe
Q 024096 182 SGLCVEHLEN 191 (272)
Q Consensus 182 ~Gf~v~~~~~ 191 (272)
+||+++++..
T Consensus 346 aGf~~~~~~~ 355 (369)
T 3gwz_A 346 SGLRVERSLP 355 (369)
T ss_dssp TTEEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9999998877
No 28
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.84 E-value=1.1e-20 Score=154.20 Aligned_cols=120 Identities=18% Similarity=0.273 Sum_probs=103.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCC----CeEEEEcccCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQD----HIRFYLCDYRQ 95 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~----~i~~~~~d~~~ 95 (272)
..++.+++.+...++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.+++++...+++. ++.++++|+..
T Consensus 16 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 95 (217)
T 3jwh_A 16 QRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY 95 (217)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc
Confidence 34456666666667889999999999999999997 44799999999999999999988777654 79999999977
Q ss_pred CC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 96 LP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 96 ~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
.+ ..++||+|++..+++|+++++...+++++.++|||||.+++..
T Consensus 96 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 96 QDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp CCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 66 5579999999999999987777899999999999999777643
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.84 E-value=3e-20 Score=154.97 Aligned_cols=165 Identities=14% Similarity=0.123 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccC
Q 024096 15 LEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYR 94 (272)
Q Consensus 15 l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 94 (272)
+...+......+++.+...++.+|||+|||+|.++..+++....+++++|+|+.+++.++++.... .++.++++|+.
T Consensus 74 ~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~ 150 (254)
T 1xtp_A 74 VHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASME 150 (254)
T ss_dssp GHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGG
T ss_pred cCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHH
Confidence 334555556778888887888999999999999999998875568999999999999999887543 47999999999
Q ss_pred CCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHH
Q 024096 95 QLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGR 173 (272)
Q Consensus 95 ~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 173 (272)
+++ ++++||+|++..+++|++++++..+++++.++|||||++++.+.......... .. .......+.++
T Consensus 151 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--------~~--~~~~~~~~~~~ 220 (254)
T 1xtp_A 151 TATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLV--------DK--EDSSLTRSDIH 220 (254)
T ss_dssp GCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEE--------ET--TTTEEEBCHHH
T ss_pred HCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccccee--------cc--cCCcccCCHHH
Confidence 887 56899999999999999887889999999999999999999876543221100 00 00112246677
Q ss_pred HHHHhhcCCCcEEEEEEecC
Q 024096 174 VTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 174 ~~~~l~~~~Gf~v~~~~~~~ 193 (272)
+.+ +++++||+++++....
T Consensus 221 ~~~-~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 221 YKR-LFNESGVRVVKEAFQE 239 (254)
T ss_dssp HHH-HHHHHTCCEEEEEECT
T ss_pred HHH-HHHHCCCEEEEeeecC
Confidence 764 5556999998876643
No 30
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.84 E-value=7e-20 Score=159.13 Aligned_cols=162 Identities=15% Similarity=0.199 Sum_probs=127.1
Q ss_pred HHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 25 VLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
.+++.++..++.+|||+|||+|..+..+++. ++.+++++|+ +.+++.+++++...++.+++++..+|+.+ +.+.+||
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~~~D 237 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPAGAG 237 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCCSCS
T ss_pred HHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCCCCc
Confidence 3444555667789999999999999999988 7889999999 99999999999998887899999999973 3223899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCC
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSG 183 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~G 183 (272)
+|++..++||+++++...+++++++.|+|||++++.+...+.. ... .... +......++...+.+++.+ +++++|
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~-~~~d-~~~~~~~~~~~~t~~e~~~-ll~~aG 312 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--HAG-TGMD-LRMLTYFGGKERSLAELGE-LAAQAG 312 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----CC-HHHH-HHHHHHHSCCCCCHHHHHH-HHHHTT
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--Ccc-HHHH-HHHHhhCCCCCCCHHHHHH-HHHHCC
Confidence 9999999999988778999999999999999999988876554 110 0111 1111224556678888875 555799
Q ss_pred cEEEEEEecC
Q 024096 184 LCVEHLENIG 193 (272)
Q Consensus 184 f~v~~~~~~~ 193 (272)
|+++++...+
T Consensus 313 f~~~~~~~~~ 322 (332)
T 3i53_A 313 LAVRAAHPIS 322 (332)
T ss_dssp EEEEEEEECS
T ss_pred CEEEEEEECC
Confidence 9999887765
No 31
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.84 E-value=8.2e-20 Score=154.79 Aligned_cols=158 Identities=20% Similarity=0.274 Sum_probs=118.8
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
+.+++.+...++.+|||+|||+|.++..+++ ++.+|+|+|+|+.+++.++++. .++.+.++|+.+++.+++||
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcC
Confidence 4667777888899999999999999999998 5889999999999999998764 37899999999988668999
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhc------ccCCCCCCCHHHHHHH
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEY------IFPGGCLPSLGRVTSA 177 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~------~~p~~~~~~~~~~~~~ 177 (272)
+|++..+++|++ ++..+++++.++|||||++++..+...... .........+... ......+++.+++.+
T Consensus 120 ~v~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 195 (279)
T 3ccf_A 120 AVFSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGGKGNIK-YILEALYNALETLGIHNPQALNPWYFPSIGEYVN- 195 (279)
T ss_dssp EEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECTTTTH-HHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHH-
T ss_pred EEEEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecCCcchH-HHHHHHHHHHHhcCCccccCcCceeCCCHHHHHH-
Confidence 999999999994 568999999999999999999766532210 0000000011110 011123557777764
Q ss_pred hhcCCCcEEEEEEec
Q 024096 178 MTSSSGLCVEHLENI 192 (272)
Q Consensus 178 l~~~~Gf~v~~~~~~ 192 (272)
+++++||+++.++..
T Consensus 196 ~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 196 ILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHTEEEEEEEEE
T ss_pred HHHHcCCEEEEEEEe
Confidence 555699998876654
No 32
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.84 E-value=1.1e-20 Score=156.90 Aligned_cols=182 Identities=16% Similarity=0.175 Sum_probs=119.3
Q ss_pred ccccccCCCCCCHH--HHHHHHHHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH
Q 024096 3 YSCAIFKSEHEDLE--VGQMRKVSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVRE 79 (272)
Q Consensus 3 y~~~~~~~~~~~l~--~aq~~~~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~ 79 (272)
|...+|+....... .......+.+++.+. ..++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~ 86 (250)
T 2p7i_A 8 YDQEIKDTAGHKYAYNFDFDVMHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD 86 (250)
T ss_dssp ---------------CHHHHTHHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS
T ss_pred CCHHHHhhHHHHhcCccchhhHHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC
Confidence 45566765544332 112223345555554 356789999999999999999986 66899999999999999987432
Q ss_pred cCCCCCeEEEEcccCCCCCCCCccEEEEechhhccChhhHHHHHHHHH-hcCccCcEEEEEeecCCCCccc------ccc
Q 024096 80 AGLQDHIRFYLCDYRQLPKANKYDRIISCGMIEHVGHDYMEEFFGCCE-SLLATHGLLVLQFISAPDQCYD------EYR 152 (272)
Q Consensus 80 ~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~-~~LkpgG~l~i~~~~~~~~~~~------~~~ 152 (272)
++.++++|+.+.+++++||+|++..+++|++ ++..+++++. ++|||||++++.++........ ...
T Consensus 87 -----~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 159 (250)
T 2p7i_A 87 -----GITYIHSRFEDAQLPRRYDNIVLTHVLEHID--DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIIS 159 (250)
T ss_dssp -----CEEEEESCGGGCCCSSCEEEEEEESCGGGCS--SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSS
T ss_pred -----CeEEEEccHHHcCcCCcccEEEEhhHHHhhc--CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccc
Confidence 7999999998887678999999999999994 5589999999 9999999999987654321100 000
Q ss_pred Ccchhhhhc-ccCCCCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 153 LSPGFIKEY-IFPGGCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 153 ~~~~~~~~~-~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
....+.... ........+.+++.+ +++++||+++++..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gf~~~~~~~~~ 200 (250)
T 2p7i_A 160 HNSAVTEAEFAHGHRCTYALDTLER-DASRAGLQVTYRSGIF 200 (250)
T ss_dssp STTCCCHHHHHTTCCCCCCHHHHHH-HHHHTTCEEEEEEEEE
T ss_pred cchhcccccccccccccCCHHHHHH-HHHHCCCeEEEEeeeE
Confidence 000000000 112234567777774 5556999999887643
No 33
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.84 E-value=3.5e-19 Score=151.90 Aligned_cols=166 Identities=17% Similarity=0.184 Sum_probs=121.9
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccEEEEec
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDRIISCG 109 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~V~~~~ 109 (272)
+.++.+|||+|||+|.++..+++....+++|+|+|+.+++.++++....++..++.++++|+.+.+ ++++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 468899999999999999988887445999999999999999999988877668999999999876 367899999999
Q ss_pred hhhc--cChhhHHHHHHHHHhcCccCcEEEEEeecCCCCc------------ccccc----Ccch-hhhhcc---cC---
Q 024096 110 MIEH--VGHDYMEEFFGCCESLLATHGLLVLQFISAPDQC------------YDEYR----LSPG-FIKEYI---FP--- 164 (272)
Q Consensus 110 ~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~------------~~~~~----~~~~-~~~~~~---~p--- 164 (272)
+++| ...++...+++++.++|||||++++..+...... +.... .... +...|. ..
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 221 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN 221 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhc
Confidence 9988 4456788999999999999999999765421100 00000 0000 000010 00
Q ss_pred --CCCCCCHHHHHHHhhcCCCcEEEEEEecCccHHH
Q 024096 165 --GGCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQ 198 (272)
Q Consensus 165 --~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~ 198 (272)
...+.+.+++. .+++++||+++....+...|..
T Consensus 222 ~~~~~~~~~~~l~-~ll~~aGf~~v~~~~~~~~~~~ 256 (298)
T 1ri5_A 222 NCIEYFVDFTRMV-DGFKRLGLSLVERKGFIDFYED 256 (298)
T ss_dssp SEEEECCCHHHHH-HHHHTTTEEEEEEEEHHHHHHH
T ss_pred CCcccccCHHHHH-HHHHHcCCEEEEecCHHHHHHH
Confidence 01345677776 5566799999999887654443
No 34
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.84 E-value=8.2e-20 Score=158.68 Aligned_cols=170 Identities=15% Similarity=0.209 Sum_probs=133.4
Q ss_pred HHHHHHHcCC--CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC
Q 024096 23 VSVLIEKARV--SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 23 ~~~l~~~l~~--~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 99 (272)
...+++.++. .++.+|||+|||+|..+..+++. ++.+++++|++ .+++.+++++...++.++++++.+|+.+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC
Confidence 3567777777 78899999999999999999988 67899999999 99999999999888877899999999886644
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccc-cCcchhhhhcccCCCCCCCHHHHHHHh
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEY-RLSPGFIKEYIFPGGCLPSLGRVTSAM 178 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l 178 (272)
+.||+|++..+++|+++++...+++++.++|+|||++++.+...+....... ............+++...+.+++.+ +
T Consensus 231 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-l 309 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYES-M 309 (335)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHH-H
T ss_pred CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHH-H
Confidence 4599999999999998888889999999999999999998887654321111 0011111111223566778888875 4
Q ss_pred hcCCCcEEEEEEecCc
Q 024096 179 TSSSGLCVEHLENIGI 194 (272)
Q Consensus 179 ~~~~Gf~v~~~~~~~~ 194 (272)
++++||.++++.....
T Consensus 310 l~~aGf~~~~~~~~~~ 325 (335)
T 2r3s_A 310 FSNAGFSHSQLHSLPT 325 (335)
T ss_dssp HHHTTCSEEEEECCTT
T ss_pred HHHCCCCeeeEEECCC
Confidence 5569999988877653
No 35
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.83 E-value=1.3e-20 Score=157.87 Aligned_cols=104 Identities=17% Similarity=0.322 Sum_probs=93.3
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEec
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCG 109 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~ 109 (272)
.+.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++ . +...++.+.++|+.+++ ++++||+|++..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 5678899999999999999999987 789999999999999999887 2 23358999999999888 668999999999
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+++|++ +...+++++.++|||||++++.
T Consensus 113 ~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLVP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 999995 5689999999999999999987
No 36
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.83 E-value=5.9e-19 Score=141.60 Aligned_cols=152 Identities=14% Similarity=0.132 Sum_probs=120.6
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
..+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...+++ ++.+.++|+.+.+.+++||
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~D 99 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTFDRQYD 99 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCCCCCEE
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCCCCCce
Confidence 35666777778889999999999999999997 789999999999999999999888774 6999999999877667899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCC
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSG 183 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~G 183 (272)
+|++..+++|++.++...+++++.++|||||++++.+...+...... .+.....+.+++.+ +.++
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~-~~~~-- 164 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT------------VGFPFAFKEGELRR-YYEG-- 164 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC------------SCCSCCBCTTHHHH-HTTT--
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC------------CCCCCccCHHHHHH-HhcC--
Confidence 99999999999877889999999999999999888666543321100 11122345666664 4433
Q ss_pred cEEEEEEec
Q 024096 184 LCVEHLENI 192 (272)
Q Consensus 184 f~v~~~~~~ 192 (272)
|++++....
T Consensus 165 f~~~~~~~~ 173 (199)
T 2xvm_A 165 WERVKYNED 173 (199)
T ss_dssp SEEEEEECC
T ss_pred CeEEEeccc
Confidence 988877653
No 37
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.83 E-value=8.7e-20 Score=159.72 Aligned_cols=163 Identities=13% Similarity=0.149 Sum_probs=130.4
Q ss_pred HHHHHcCCCC-CCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCC
Q 024096 25 VLIEKARVSK-GQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KAN 100 (272)
Q Consensus 25 ~l~~~l~~~~-~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~ 100 (272)
.+++.++..+ +.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+.+ .++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 6777777777 899999999999999999988 7889999999 8899999999998888778999999998876 567
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC-cchhhhhcccCCCCCCCHHHHHHHhh
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL-SPGFIKEYIFPGGCLPSLGRVTSAMT 179 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~l~ 179 (272)
.||+|++..++||+++++...+++++++.|+|||++++.+...+......... ..........+++...+.+++.+ ++
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~-ll 326 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAG-VV 326 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHH-HH
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHH-HH
Confidence 79999999999999888889999999999999999999988766543211110 01111111234566778888874 55
Q ss_pred cCCCcEEEEE
Q 024096 180 SSSGLCVEHL 189 (272)
Q Consensus 180 ~~~Gf~v~~~ 189 (272)
+++||++++.
T Consensus 327 ~~aGf~~~~~ 336 (352)
T 3mcz_A 327 RDAGLAVGER 336 (352)
T ss_dssp HHTTCEEEEE
T ss_pred HHCCCceeee
Confidence 5799998873
No 38
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.83 E-value=5.4e-20 Score=157.97 Aligned_cols=163 Identities=20% Similarity=0.272 Sum_probs=122.5
Q ss_pred CCCCCCEEEEECCCchHHHHHHH-H-ccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEe
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIV-K-QTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISC 108 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~-~-~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~ 108 (272)
.+.++.+|||+|||+|..+..++ . .++.+++|+|+|+.+++.+++++...++.++++++++|+.+++.+++||+|++.
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 45788999999999999999985 3 378899999999999999999999888877899999999998844999999999
Q ss_pred chhhccChh-hHHHHHHHHHhcCccCcEEEEEeecCCCCccccc-------cCcchhhhhccc-----CC-CCCCCHHHH
Q 024096 109 GMIEHVGHD-YMEEFFGCCESLLATHGLLVLQFISAPDQCYDEY-------RLSPGFIKEYIF-----PG-GCLPSLGRV 174 (272)
Q Consensus 109 ~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-------~~~~~~~~~~~~-----p~-~~~~~~~~~ 174 (272)
.+++|+++. ....+++++.++|||||++++.++..+....... .........+.+ .+ ..+.+.+++
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 999999644 3346899999999999999998766543211111 000001111111 11 134678888
Q ss_pred HHHhhcCCCcEEEEEEecCc
Q 024096 175 TSAMTSSSGLCVEHLENIGI 194 (272)
Q Consensus 175 ~~~l~~~~Gf~v~~~~~~~~ 194 (272)
.+ +++++||+++++.....
T Consensus 275 ~~-~l~~aGF~~v~~~~~~~ 293 (305)
T 3ocj_A 275 RA-QLEEAGFTDLRFEDDRA 293 (305)
T ss_dssp HH-HHHHTTCEEEEEECCTT
T ss_pred HH-HHHHCCCEEEEEEcccC
Confidence 75 55569999998886543
No 39
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.83 E-value=7.2e-20 Score=153.04 Aligned_cols=148 Identities=14% Similarity=0.083 Sum_probs=113.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC--CC-
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ--LP- 97 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~--~~- 97 (272)
...+.+++.+.+.++.+|||+|||+|.++..++++ +.+|+|+|+|+.+++.+++++... .+.....++.. ..
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~ 106 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKE 106 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeecccccccc
Confidence 34567888888999999999999999999999997 789999999999999999986543 12222222221 11
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCC-----------------------CccccccCc
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPD-----------------------QCYDEYRLS 154 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-----------------------~~~~~~~~~ 154 (272)
.+++||+|++..+++|++.++...+++++.++| |||+++++...... .....+...
T Consensus 107 ~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 185 (261)
T 3iv6_A 107 LAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFREA 185 (261)
T ss_dssp GTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGGT
T ss_pred cCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhhh
Confidence 247899999999999998888889999999999 99999997543211 011111335
Q ss_pred chhhhhcccCCCCCCCHHHH
Q 024096 155 PGFIKEYIFPGGCLPSLGRV 174 (272)
Q Consensus 155 ~~~~~~~~~p~~~~~~~~~~ 174 (272)
..|+.+|++|+|.+|+..-+
T Consensus 186 ~~~i~~~~~p~g~~~~~~~~ 205 (261)
T 3iv6_A 186 GDVLDRALVPHGLIDKPTLL 205 (261)
T ss_dssp THHHHHHCCCCTTCCHHHHH
T ss_pred hhHHHhccCCCCcccHHHHH
Confidence 67889999999998876543
No 40
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.82 E-value=1.4e-19 Score=147.00 Aligned_cols=148 Identities=18% Similarity=0.250 Sum_probs=116.5
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
+..++.. +.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. ++.+.++|+.+++.+++|
T Consensus 34 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~f 103 (211)
T 3e23_A 34 LTKFLGE--LPAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDAY 103 (211)
T ss_dssp HHHHHTT--SCTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSCE
T ss_pred HHHHHHh--cCCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCcE
Confidence 3444444 347889999999999999999987 789999999999999999886 467889999998877899
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCC
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSS 182 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~ 182 (272)
|+|++..+++|++.+++..+++++.++|||||++++............ ... .....+.+++.+ +++++
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-------~~~----~~~~~~~~~~~~-~l~~a 171 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDK-------LAR----YYNYPSEEWLRA-RYAEA 171 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECT-------TSC----EECCCCHHHHHH-HHHHH
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccc-------cch----hccCCCHHHHHH-HHHhC
Confidence 999999999999877889999999999999999999765433221110 011 113457777775 45569
Q ss_pred C-cEEEEEEec
Q 024096 183 G-LCVEHLENI 192 (272)
Q Consensus 183 G-f~v~~~~~~ 192 (272)
| |+++.+...
T Consensus 172 G~f~~~~~~~~ 182 (211)
T 3e23_A 172 GTWASVAVESS 182 (211)
T ss_dssp CCCSEEEEEEE
T ss_pred CCcEEEEEEec
Confidence 9 998887654
No 41
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.82 E-value=3.1e-19 Score=157.42 Aligned_cols=166 Identities=18% Similarity=0.195 Sum_probs=126.5
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
+.+++.+++.++.+|||+|||+|.++..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+..+ ..|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 249 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP-VTA 249 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-CCE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC-CCC
Confidence 45666777788899999999999999999988 6789999999 99999999999988887799999999876222 359
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee--cCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhc
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI--SAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTS 180 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 180 (272)
|+|++..+++|+++++...+++++.++|||||++++.+. ..++........... +.....+++...+.+++.+ +++
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-ll~ 327 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLD-LRMLTFMGGRVRTRDEVVD-LAG 327 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHH-HHHHHHHSCCCCCHHHHHH-HHH
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcc-hHHHHhCCCcCCCHHHHHH-HHH
Confidence 999999999999877667999999999999999999887 544321111111011 1111223466678888875 555
Q ss_pred CCCcEEEEEEecC
Q 024096 181 SSGLCVEHLENIG 193 (272)
Q Consensus 181 ~~Gf~v~~~~~~~ 193 (272)
++||+++++...+
T Consensus 328 ~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 328 SAGLALASERTSG 340 (374)
T ss_dssp TTTEEEEEEEEEC
T ss_pred HCCCceEEEEECC
Confidence 7999998887765
No 42
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.82 E-value=2.4e-19 Score=144.69 Aligned_cols=142 Identities=14% Similarity=0.189 Sum_probs=114.4
Q ss_pred CCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechhhc
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMIEH 113 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~~~ 113 (272)
+.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .++.++++|+.+++ ++++||+|++..+++|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIH 114 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTT
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhc
Confidence 789999999999999999997 779999999999999998872 37899999999988 6789999999999999
Q ss_pred cChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 114 VGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
++.+++..+++++.++|||||++++..+...... .+... .......+.+++.+ +++++||+++.+....
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~~~~--------~~~~~~~~~~~~~~-~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 115 MGPGELPDALVALRMAVEDGGGLLMSFFSGPSLE--PMYHP--------VATAYRWPLPELAQ-ALETAGFQVTSSHWDP 183 (203)
T ss_dssp CCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCE--EECCS--------SSCEEECCHHHHHH-HHHHTTEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchh--hhhch--------hhhhccCCHHHHHH-HHHHCCCcEEEEEecC
Confidence 9877889999999999999999999876644311 11000 00112356777764 5556999999988765
Q ss_pred c
Q 024096 194 I 194 (272)
Q Consensus 194 ~ 194 (272)
.
T Consensus 184 ~ 184 (203)
T 3h2b_A 184 R 184 (203)
T ss_dssp T
T ss_pred C
Confidence 3
No 43
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.82 E-value=1.6e-19 Score=158.73 Aligned_cols=163 Identities=13% Similarity=0.125 Sum_probs=124.7
Q ss_pred HHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC--CCCCCcc
Q 024096 27 IEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL--PKANKYD 103 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~--~~~~~fD 103 (272)
+..+...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+. +.+++||
T Consensus 172 l~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D 250 (363)
T 3dp7_A 172 LEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFD 250 (363)
T ss_dssp HHHHGGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCS
T ss_pred HHHhcccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcC
Confidence 33333346689999999999999999988 7889999999 999999999998888777999999999885 3237899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC----cchhhhhcccCCCCCCCHHHHHHHhh
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL----SPGFIKEYIFPGGCLPSLGRVTSAMT 179 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~~l~ 179 (272)
+|++..++|++++++...+++++++.|||||++++.+...+......... ....+......++...+.+++.+ ++
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~-ll 329 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIR-CI 329 (363)
T ss_dssp EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHH-HH
T ss_pred EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHH-HH
Confidence 99999999999988888999999999999999999887765543211000 00001111123345568888874 55
Q ss_pred cCCCcEEEEEEe
Q 024096 180 SSSGLCVEHLEN 191 (272)
Q Consensus 180 ~~~Gf~v~~~~~ 191 (272)
+++||+++++..
T Consensus 330 ~~AGf~~v~~~~ 341 (363)
T 3dp7_A 330 ENAGLEVEEIQD 341 (363)
T ss_dssp HTTTEEESCCCC
T ss_pred HHcCCeEEEEEe
Confidence 679999877654
No 44
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.82 E-value=4.5e-20 Score=158.02 Aligned_cols=121 Identities=17% Similarity=0.300 Sum_probs=103.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC--CCeEEEEcccCCCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQ--DHIRFYLCDYRQLPK 98 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~--~~i~~~~~d~~~~~~ 98 (272)
..+..+++.+...++ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++. .+++++++|+.+++.
T Consensus 70 ~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 70 SEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 345667777765544 9999999999999999987 789999999999999999998876532 479999999999887
Q ss_pred CCCccEEEEe-chhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 99 ANKYDRIISC-GMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 99 ~~~fD~V~~~-~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
+++||+|++. .+++|+++++...+++++.++|||||++++..+..
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 7899998864 67778876678999999999999999999987664
No 45
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.82 E-value=1.2e-19 Score=160.61 Aligned_cols=154 Identities=21% Similarity=0.202 Sum_probs=116.3
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-----C-C-CCCeEEEEcccCCC------
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREA-----G-L-QDHIRFYLCDYRQL------ 96 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~-----g-~-~~~i~~~~~d~~~~------ 96 (272)
..++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.+++++... | . ..+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457899999999999999999987 5679999999999999999988754 3 2 25899999999886
Q ss_pred C-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHH
Q 024096 97 P-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVT 175 (272)
Q Consensus 97 ~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 175 (272)
+ ++++||+|++..+++|++ ++..+++++.++|||||++++.++.............. ..+........+.+++.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 235 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLST--NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDP---ILYGECLGGALYLEDFR 235 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCH---HHHHTTCTTCCBHHHHH
T ss_pred CCCCCCEEEEEEccchhcCC--CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhH---HHhhcccccCCCHHHHH
Confidence 6 568999999999999995 56899999999999999999988765432211111110 11112223445677777
Q ss_pred HHhhcCCCcEEEEEEe
Q 024096 176 SAMTSSSGLCVEHLEN 191 (272)
Q Consensus 176 ~~l~~~~Gf~v~~~~~ 191 (272)
+ +++++||.++++.+
T Consensus 236 ~-ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 236 R-LVAEAGFRDVRLVS 250 (383)
T ss_dssp H-HHHHTTCCCEEEEE
T ss_pred H-HHHHCCCceEEEEe
Confidence 5 55569997665444
No 46
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=2.4e-19 Score=149.67 Aligned_cols=114 Identities=19% Similarity=0.256 Sum_probs=99.2
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANK 101 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~ 101 (272)
...+.+.++..++.+|||+|||+|.++..+++....+++|+|+|+.+++.++++.. ..++.++++|+.+++ ++++
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~ 108 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDA 108 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTC
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCC
Confidence 45566777777889999999999999999999733399999999999999998864 358999999999988 5789
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
||+|++..+++|+ +++..+++++.++|||||+++++...
T Consensus 109 fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 109 YNVVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9999999999999 56789999999999999999997543
No 47
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.82 E-value=9.3e-19 Score=153.65 Aligned_cols=167 Identities=14% Similarity=0.174 Sum_probs=130.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 99 (272)
.....+++.++..++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++++...+++++++++.+|+.+.+.+
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 33467788888888899999999999999999998 6789999999 999999999999888877899999999887632
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcc-cCCCC----CCCHHHH
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYI-FPGGC----LPSLGRV 174 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~----~~~~~~~ 174 (272)
+ +|+|++..+++|+++++...+++++.++|||||++++.+...++...... ........ ..++. +.+.+++
T Consensus 256 ~-~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~t~~e~ 331 (359)
T 1x19_A 256 E-ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNF---DYLSHYILGAGMPFSVLGFKEQARY 331 (359)
T ss_dssp C-CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCH---HHHHHHGGGGGSSCCCCCCCCGGGH
T ss_pred C-CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchH---HHHHHHHHhcCCCCcccCCCCHHHH
Confidence 2 39999999999998877899999999999999999998877654311111 11111111 12122 3678888
Q ss_pred HHHhhcCCCcEEEEEEecC
Q 024096 175 TSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 175 ~~~l~~~~Gf~v~~~~~~~ 193 (272)
.+ +++++||+++++...+
T Consensus 332 ~~-ll~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 332 KE-ILESLGYKDVTMVRKY 349 (359)
T ss_dssp HH-HHHHHTCEEEEEEEET
T ss_pred HH-HHHHCCCceEEEEecC
Confidence 75 4556999998877654
No 48
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.81 E-value=2.1e-19 Score=148.98 Aligned_cols=147 Identities=20% Similarity=0.302 Sum_probs=115.5
Q ss_pred CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechhh
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMIE 112 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~~ 112 (272)
++.+|||+|||+|.++..+++....+++++|+|+.+++.++++....+ ..++.++++|+.+++ ++++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 688999999999999999888755699999999999999999887654 246899999998887 556899999999999
Q ss_pred ccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEec
Q 024096 113 HVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENI 192 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~ 192 (272)
|++++....+++++.++|||||++++.+...+... .+.. . ......+.+++.+ +++++||+++.....
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~~----~-----~~~~~~~~~~~~~-~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV--ILDD----V-----DSSVCRDLDVVRR-IICSAGLSLLAEERQ 225 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE--EEET----T-----TTEEEEBHHHHHH-HHHHTTCCEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc--eecc----c-----CCcccCCHHHHHH-HHHHcCCeEEEeeec
Confidence 99877677999999999999999999887654310 0000 0 0111236667764 455699999888765
Q ss_pred C
Q 024096 193 G 193 (272)
Q Consensus 193 ~ 193 (272)
.
T Consensus 226 ~ 226 (241)
T 2ex4_A 226 E 226 (241)
T ss_dssp C
T ss_pred C
Confidence 3
No 49
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.81 E-value=1.1e-18 Score=144.55 Aligned_cols=147 Identities=17% Similarity=0.248 Sum_probs=113.8
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechh
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMI 111 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~ 111 (272)
.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. ...++.++++|+.+++ ++++||+|++..++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 47889999999999999999997 889999999999999998774 2358999999999988 67899999999999
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhccc-CCCCCCCHHHHHHHhhcCCCcEEEEEE
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIF-PGGCLPSLGRVTSAMTSSSGLCVEHLE 190 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~l~~~~Gf~v~~~~ 190 (272)
+|+ .++..+++++.++|+|||++++.+......... ..+...+-. ......+..++. .+++++||++++..
T Consensus 127 ~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 127 EWT--EEPLRALNEIKRVLKSDGYACIAILGPTAKPRE-----NSYPRLYGKDVVCNTMMPWEFE-QLVKEQGFKVVDGI 198 (242)
T ss_dssp TSS--SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGG-----GGGGGGGTCCCSSCCCCHHHHH-HHHHHTTEEEEEEE
T ss_pred hhc--cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhh-----hhhhhhccccccccCCCHHHHH-HHHHHcCCEEEEee
Confidence 999 456899999999999999999987654332111 111111111 122345666776 45567999998877
Q ss_pred ec
Q 024096 191 NI 192 (272)
Q Consensus 191 ~~ 192 (272)
.+
T Consensus 199 ~~ 200 (242)
T 3l8d_A 199 GV 200 (242)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 50
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.81 E-value=4.4e-19 Score=145.94 Aligned_cols=158 Identities=16% Similarity=0.209 Sum_probs=117.4
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC----CCCeEEEEcccCCCC-CCCCccEEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGL----QDHIRFYLCDYRQLP-KANKYDRIIS 107 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~----~~~i~~~~~d~~~~~-~~~~fD~V~~ 107 (272)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++....++ ..++.+.++|+.+++ ++++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 47889999999999999999997 88999999999999999999877665 236899999999988 6789999999
Q ss_pred echhhccChh-hHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhh------hhccc---------CCCCCCCH
Q 024096 108 CGMIEHVGHD-YMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFI------KEYIF---------PGGCLPSL 171 (272)
Q Consensus 108 ~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~------~~~~~---------p~~~~~~~ 171 (272)
..+++|+++. ....+++++.++|||||++++.++................. ..+.. ......+.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTE 187 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCH
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCH
Confidence 9999999643 34589999999999999999987764322110000000000 00000 00134577
Q ss_pred HHHHHHhhcCCCcEEEEEEec
Q 024096 172 GRVTSAMTSSSGLCVEHLENI 192 (272)
Q Consensus 172 ~~~~~~l~~~~Gf~v~~~~~~ 192 (272)
+++.+ +++++||+++.+...
T Consensus 188 ~~l~~-ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 188 KELVF-LLTDCRFEIDYFRVK 207 (235)
T ss_dssp HHHHH-HHHTTTEEEEEEEEE
T ss_pred HHHHH-HHHHcCCEEEEEEec
Confidence 88874 556799999887653
No 51
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.81 E-value=4.9e-19 Score=153.86 Aligned_cols=166 Identities=14% Similarity=0.153 Sum_probs=128.3
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANK 101 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 101 (272)
...+++.++..+ .+|||+|||+|..+..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+ +.+++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 233 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSN 233 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSS
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCC
Confidence 456777777777 89999999999999999988 7889999999 99999999998877766789999999977 43368
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcC
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSS 181 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 181 (272)
||+|++..+++|+++++...+++++++.|+|||++++.+...++............ ......++...+.+++.+ ++++
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~e~~~-ll~~ 311 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDV-HLFMACAGRHRTTEEVVD-LLGR 311 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHH-HHHHHHSCCCCBHHHHHH-HHHH
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhh-HhHhhCCCcCCCHHHHHH-HHHH
Confidence 99999999999998877779999999999999999998877654321111100111 111112345567888874 5556
Q ss_pred CCcEEEEEEecC
Q 024096 182 SGLCVEHLENIG 193 (272)
Q Consensus 182 ~Gf~v~~~~~~~ 193 (272)
+||+++++...+
T Consensus 312 aGf~~~~~~~~~ 323 (334)
T 2ip2_A 312 GGFAVERIVDLP 323 (334)
T ss_dssp TTEEEEEEEEET
T ss_pred CCCceeEEEECC
Confidence 999998877653
No 52
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.81 E-value=9.6e-19 Score=146.09 Aligned_cols=145 Identities=18% Similarity=0.208 Sum_probs=110.5
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH----------c------CCCCCeEEEEcccC
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVRE----------A------GLQDHIRFYLCDYR 94 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~----------~------g~~~~i~~~~~d~~ 94 (272)
...++.+|||+|||+|..+..|++. |.+|+|+|+|+.+++.|+++... . ....+++++++|+.
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 3457889999999999999999997 88999999999999999776531 0 01247999999999
Q ss_pred CCCC-C-CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHH
Q 024096 95 QLPK-A-NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLG 172 (272)
Q Consensus 95 ~~~~-~-~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 172 (272)
+++. + ++||+|++..+++|++.++...+++++.++|||||++++.++....... . .|. ...+.+
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~----------~---g~~-~~~~~~ 209 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH----------A---GPP-FYVPSA 209 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC----------C---CSS-CCCCHH
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC----------C---CCC-CCCCHH
Confidence 9883 2 7999999999999998878889999999999999999866554322100 0 010 124667
Q ss_pred HHHHHhhcCCCcEEEEEEec
Q 024096 173 RVTSAMTSSSGLCVEHLENI 192 (272)
Q Consensus 173 ~~~~~l~~~~Gf~v~~~~~~ 192 (272)
++.+. .+. +|++...+..
T Consensus 210 el~~~-l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 210 ELKRL-FGT-KCSMQCLEEV 227 (252)
T ss_dssp HHHHH-HTT-TEEEEEEEEE
T ss_pred HHHHH-hhC-CeEEEEEecc
Confidence 77654 443 6999877654
No 53
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.80 E-value=8.3e-19 Score=153.94 Aligned_cols=166 Identities=19% Similarity=0.279 Sum_probs=128.3
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
..+++.++..++.+|||+|||+|.++..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+..+ ..|
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 250 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP-RKA 250 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-SCE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC-CCc
Confidence 45667778888899999999999999999988 6789999999 99999999999988887799999999876222 359
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec-CCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcC
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS-APDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSS 181 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 181 (272)
|+|++..+++|+++++...+++++.++|||||++++.+.. .++........... +......++...+.+++.+ ++++
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~t~~e~~~-ll~~ 328 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELD-LRMLVFLGGALRTREKWDG-LAAS 328 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHH-HHHHHHHSCCCCBHHHHHH-HHHH
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhcc-HHHhhhcCCcCCCHHHHHH-HHHH
Confidence 9999999999998777779999999999999999998876 44321111100000 0111123456678888875 5556
Q ss_pred CCcEEEEEEecC
Q 024096 182 SGLCVEHLENIG 193 (272)
Q Consensus 182 ~Gf~v~~~~~~~ 193 (272)
+||+++++...+
T Consensus 329 aGf~~~~~~~~~ 340 (360)
T 1tw3_A 329 AGLVVEEVRQLP 340 (360)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCeEEEEEeCC
Confidence 999998877654
No 54
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.80 E-value=1.4e-19 Score=153.85 Aligned_cols=117 Identities=25% Similarity=0.351 Sum_probs=102.0
Q ss_pred HHHHHHHHc-CCCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC
Q 024096 22 KVSVLIEKA-RVSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK 98 (272)
Q Consensus 22 ~~~~l~~~l-~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~ 98 (272)
.+..+++.+ .+.++.+|||+|||+|.++..+++. + +.+++|+|+|+.+++.++++....+. +++++++|+.+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 86 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL 86 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc
Confidence 345556555 5678899999999999999999987 4 58999999999999999999877653 89999999999886
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+++||+|++..+++|++ +...+++++.++|||||++++.++.
T Consensus 87 ~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 NDKYDIAICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SSCEEEEEEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCeeEEEECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 67999999999999994 5589999999999999999987665
No 55
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=1.9e-19 Score=151.18 Aligned_cols=156 Identities=17% Similarity=0.162 Sum_probs=118.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KA 99 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~ 99 (272)
...+.+++.++..++.+|||+|||+|.++..+++ ++.+|+|+|+|+.+++.++++. +++++++|+.+++ ++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCC
Confidence 4567788888888899999999999999999998 5889999999999998876542 7999999999988 67
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhccc-CCCCCCCHHHHHHHh
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIF-PGGCLPSLGRVTSAM 178 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~l 178 (272)
++||+|++..+++|+ .++..+++++.++|| ||++++.++..+........ ..+..... ....+++.+++. +
T Consensus 93 ~~fD~v~~~~~l~~~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~ 164 (261)
T 3ege_A 93 KSVDGVISILAIHHF--SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLY---DYFPFLWEDALRFLPLDEQIN--L 164 (261)
T ss_dssp TCBSEEEEESCGGGC--SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGG---GTCHHHHHHHHTSCCHHHHHH--H
T ss_pred CCEeEEEEcchHhhc--cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHH---HHHHHHhhhhhhhCCCHHHHH--H
Confidence 899999999999999 567999999999999 99998877753221100000 11110000 012345556665 6
Q ss_pred hcCCCcEEEEEEec
Q 024096 179 TSSSGLCVEHLENI 192 (272)
Q Consensus 179 ~~~~Gf~v~~~~~~ 192 (272)
++++||.++.+..+
T Consensus 165 l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 165 LQENTKRRVEAIPF 178 (261)
T ss_dssp HHHHHCSEEEEEEC
T ss_pred HHHcCCCceeEEEe
Confidence 66799988877775
No 56
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.80 E-value=6.7e-19 Score=153.92 Aligned_cols=162 Identities=11% Similarity=0.188 Sum_probs=121.3
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANK 101 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 101 (272)
...+++.+++.++.+|||||||+|..+..+++. ++.+++++|+ +.++. +++.+..++.++++++.+|+.+ +.+ +
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p-~ 247 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-EVP-H 247 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-CCC-C
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-CCC-C
Confidence 356778888888999999999999999999988 7889999999 44444 3333334555689999999962 322 8
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcC
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSS 181 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 181 (272)
||+|++..++||+++++...++++++++|||||++++.+...+............ +......++...+.+++.+ ++++
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d-~~~~~~~~~~~~t~~e~~~-ll~~ 325 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMD-FMMLAARTGQERTAAELEP-LFTA 325 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHH-HHHHHTTSCCCCBHHHHHH-HHHH
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcC-hhhhhcCCCcCCCHHHHHH-HHHH
Confidence 9999999999999887778999999999999999999888765542111110111 1112235566678888874 5557
Q ss_pred CCcEEEEEEe
Q 024096 182 SGLCVEHLEN 191 (272)
Q Consensus 182 ~Gf~v~~~~~ 191 (272)
+||+++++..
T Consensus 326 aGf~~~~~~~ 335 (348)
T 3lst_A 326 AGLRLDRVVG 335 (348)
T ss_dssp TTEEEEEEEE
T ss_pred CCCceEEEEE
Confidence 9999988876
No 57
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.80 E-value=5.1e-20 Score=159.03 Aligned_cols=230 Identities=15% Similarity=0.147 Sum_probs=158.0
Q ss_pred CcccccccCCCCCCHHHH---HH----HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHH
Q 024096 1 MTYSCAIFKSEHEDLEVG---QM----RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLK 71 (272)
Q Consensus 1 ~~y~~~~~~~~~~~l~~a---q~----~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~ 71 (272)
|.|+++|++.....+..+ |. .....+++.+.+.++.+|||+|||+|.++..+++. . +.+|+|+|+|+.+++
T Consensus 35 ~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~ 114 (317)
T 1dl5_A 35 YPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICE 114 (317)
T ss_dssp CCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHH
T ss_pred hccccCccCCCcccccCCCcceeccCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHH
Confidence 457777776554244444 33 66788899999999999999999999999999987 3 467999999999999
Q ss_pred HHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCC--CCcc
Q 024096 72 YAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAP--DQCY 148 (272)
Q Consensus 72 ~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~--~~~~ 148 (272)
.+++++...+++ ++++.++|+.+.+ ..++||+|++..+++|++ +++.+.|||||+++++..... ....
T Consensus 115 ~a~~~~~~~g~~-~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~~~~~~~~~ 185 (317)
T 1dl5_A 115 IAKRNVERLGIE-NVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINLKLSRRQPA 185 (317)
T ss_dssp HHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCBGGGTBCEE
T ss_pred HHHHHHHHcCCC-CeEEEECChhhccccCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECCCCcccceE
Confidence 999999998885 5999999998855 457899999999999985 457889999999999855432 1111
Q ss_pred ccc-cCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecCccHHHHHHHHHH-HHHhhHHHHHhccCChHHHHH
Q 024096 149 DEY-RLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIGIHYYQTLRCWRK-NFMGKQSEILALGFNEKFIRT 226 (272)
Q Consensus 149 ~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 226 (272)
..+ .....+..++++|.+.+|....+...+.+ ....+ .++ .|..+++.|+. +|.+........ + .++
T Consensus 186 ~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~-~~~~~---~~~--~y~~tl~~~~~~~f~~~~~~~~~~-~----~~~ 254 (317)
T 1dl5_A 186 FLFKKKDPYLVGNYKLETRFITAGGNLGNLLER-NRKLL---REF--PFNREILLVRSHIFVELVDLLTRR-L----TEI 254 (317)
T ss_dssp EEEEEETTEEEEEEEEECCCCBCCGGGSCHHHH-HHTTC---CCC--CEEEEEECTTHHHHHHHHHHHHSC-E----EEE
T ss_pred EEEEEeCCcEEEEEeccEEEEEccCcccccccc-chhhh---hcc--cchhhccCcchhhhhhhhhhhccc-c----Ccc
Confidence 111 11234667788888888776544321111 11100 111 14455667777 777666554322 2 245
Q ss_pred HH-HHHHHHHH--HHhcCCccEEEEEEEeC
Q 024096 227 WE-YYFDYCAA--SFKSRIIGDYQIVFSRP 253 (272)
Q Consensus 227 w~-~~~~~~~~--~f~~g~~~~~~~~~~k~ 253 (272)
|+ +|+..|++ +|..|. .++.++||
T Consensus 255 ~~~~yl~~~~~~~~F~~~~---~~v~~~~~ 281 (317)
T 1dl5_A 255 DGTFYYAGPNGVVEFLDDR---MRIYGDAP 281 (317)
T ss_dssp TTEEEEECSSEEEEEETTE---EEEEECCH
T ss_pred CceEEEECCCCeEEEeCCc---EEEEecHH
Confidence 65 55566644 576544 45566776
No 58
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.79 E-value=2.5e-18 Score=140.81 Aligned_cols=123 Identities=20% Similarity=0.363 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccC
Q 024096 15 LEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYR 94 (272)
Q Consensus 15 l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 94 (272)
+.+......+.+.+.+ .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++....+ .+++++++|+.
T Consensus 21 ~~~~~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~ 95 (227)
T 1ve3_A 21 YRSRIETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDAR 95 (227)
T ss_dssp HHHHHHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTT
T ss_pred HHHHHHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchh
Confidence 3333333344444444 35789999999999999999987 5599999999999999999988776 57999999999
Q ss_pred CCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 95 QLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 95 ~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+++ ++++||+|++..++++....+...+++++.++|+|||++++.++.
T Consensus 96 ~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 96 KLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 887 567999999999965555577889999999999999999998765
No 59
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.79 E-value=1.9e-18 Score=151.28 Aligned_cols=166 Identities=16% Similarity=0.117 Sum_probs=129.4
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
..+++.++..+..+|||||||+|..+..++++ ++.+++..|. |.+++.+++++...+ .++++++.+|+.+.+. ..+
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~-~~~ 245 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL-PEA 245 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC-CCC
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC-CCc
Confidence 45667777888899999999999999999998 8899999997 889999998876544 4699999999886543 458
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCC
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSS 182 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~ 182 (272)
|+|++..++|++++++...+++++++.|+|||+++|.+...++...........-+......++.-.+.+++. .+++++
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~-~ll~~A 324 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYH-MLLSSA 324 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHH-HHHHHH
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHH-HHHHHC
Confidence 9999999999999988889999999999999999999988765432222111111222334456667888887 456679
Q ss_pred CcEEEEEEecC
Q 024096 183 GLCVEHLENIG 193 (272)
Q Consensus 183 Gf~v~~~~~~~ 193 (272)
||+++++...+
T Consensus 325 Gf~~v~v~~~~ 335 (353)
T 4a6d_A 325 GFRDFQFKKTG 335 (353)
T ss_dssp TCEEEEEECCS
T ss_pred CCceEEEEEcC
Confidence 99998887654
No 60
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.79 E-value=1.5e-18 Score=140.42 Aligned_cols=113 Identities=29% Similarity=0.386 Sum_probs=97.5
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEech
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGM 110 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~ 110 (272)
..++.+|||+|||+|..+..++...+.+++|+|+|+.+++.+++++...+ .++.+.++|+.+++ ++++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcCh
Confidence 35678999999999997544434457899999999999999999988766 37899999999988 5689999999999
Q ss_pred hhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCC
Q 024096 111 IEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQ 146 (272)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 146 (272)
++|++.++...+++++.++|||||++++.++..++.
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 134 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDE 134 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTST
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccch
Confidence 999987788999999999999999999988876543
No 61
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.79 E-value=1.7e-18 Score=145.34 Aligned_cols=106 Identities=17% Similarity=0.259 Sum_probs=93.0
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEec-hh
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCG-MI 111 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~-~~ 111 (272)
.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .++.++++|+.+++.+++||+|++.. ++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD~v~~~~~~l 121 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRN------PDAVLHHGDMRDFSLGRRFSAVTCMFSSI 121 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTCCCSCCEEEEEECTTGG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChHHCCccCCcCEEEEcCchh
Confidence 46689999999999999999987 779999999999999999874 27899999999988778999999998 99
Q ss_pred hccCh-hhHHHHHHHHHhcCccCcEEEEEeecCCC
Q 024096 112 EHVGH-DYMEEFFGCCESLLATHGLLVLQFISAPD 145 (272)
Q Consensus 112 ~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 145 (272)
+|+++ ++...+++++.++|||||++++..+..+.
T Consensus 122 ~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 122 GHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp GGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 99964 46778999999999999999997654443
No 62
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.79 E-value=4.5e-18 Score=144.52 Aligned_cols=116 Identities=17% Similarity=0.262 Sum_probs=102.9
Q ss_pred HHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccE
Q 024096 25 VLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDR 104 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~ 104 (272)
.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ ++++.++|+.+.+.+++||+
T Consensus 111 ~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~ 187 (286)
T 3m70_A 111 DVVDAAKIISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDF 187 (286)
T ss_dssp HHHHHHHHSCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEE
T ss_pred HHHHHhhccCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccE
Confidence 4444444457889999999999999999997 78999999999999999999998876 79999999998877789999
Q ss_pred EEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 105 IISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 105 V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
|++..+++|+++++...+++++.++|+|||++++.....
T Consensus 188 i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 188 IVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp EEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred EEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 999999999988888899999999999999988865543
No 63
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.7e-18 Score=144.86 Aligned_cols=109 Identities=18% Similarity=0.264 Sum_probs=96.1
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCCeEEEEcccCCCC-CC------C
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREA-GLQDHIRFYLCDYRQLP-KA------N 100 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~-g~~~~i~~~~~d~~~~~-~~------~ 100 (272)
...++.+|||+|||+|..+..+++. ++.+|+|+|+|+.+++.+++++... +...+++++++|+.+++ .+ +
T Consensus 33 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 33 HDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred hcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 3467899999999999999999973 5789999999999999999999886 44568999999999987 44 7
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+||+|++..+++|+ ++..+++++.++|||||.+++..+.
T Consensus 113 ~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 113 KIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp CEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 99999999999999 5689999999999999999985544
No 64
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.78 E-value=2.3e-18 Score=141.05 Aligned_cols=174 Identities=16% Similarity=0.234 Sum_probs=123.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC--C-CCC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL--P-KAN 100 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~--~-~~~ 100 (272)
..+++.+. .++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++. ..+.++|+.+. + +++
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~ 92 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEE 92 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTT
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCC
Confidence 44556655 67889999999999999999987 789999999999999888652 37899998873 3 457
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCcc-cc-ccCcchhh-hhccc-CCCCCCCHHHHHH
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCY-DE-YRLSPGFI-KEYIF-PGGCLPSLGRVTS 176 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~-~~~~~~~~-~~~~~-p~~~~~~~~~~~~ 176 (272)
+||+|++..+++|++ +...+++++.++|+|||++++..+....... .. ........ ..... ......+.+++.+
T Consensus 93 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLF--DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLR 170 (230)
T ss_dssp CEEEEEEESCGGGSS--CHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHH
T ss_pred ccCEEEECChhhhcC--CHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHH
Confidence 899999999999995 4589999999999999999997655322100 00 00000000 00000 1123467777774
Q ss_pred HhhcCCCcEEEEEEecCccHHHHHHHHHHHHHhhH
Q 024096 177 AMTSSSGLCVEHLENIGIHYYQTLRCWRKNFMGKQ 211 (272)
Q Consensus 177 ~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (272)
+++++||+++++......+ .....|..++....
T Consensus 171 -~l~~~Gf~~~~~~~~~~~~-~~~~~~~~~l~~~~ 203 (230)
T 3cc8_A 171 -MFLKAGYSISKVDRVYVDH-KMYEPLIEELYGIC 203 (230)
T ss_dssp -HHHHTTEEEEEEEEEECCC-GGGHHHHHHHHHHH
T ss_pred -HHHHcCCeEEEEEecccCh-hhccchHHHHHHHH
Confidence 5556999999988877665 55666776665433
No 65
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.78 E-value=1.6e-18 Score=135.85 Aligned_cols=142 Identities=16% Similarity=0.110 Sum_probs=112.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~f 102 (272)
+.+++.+...++.+|||+|||+|.++..+++.. .+++|+|+++.+++.++++ .+++.+..+| .+ ++++|
T Consensus 7 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~ 76 (170)
T 3i9f_A 7 EEYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSV 76 (170)
T ss_dssp TTTHHHHHSSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCE
T ss_pred HHHHHhcCcCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCce
Confidence 345666677888999999999999999999874 4999999999999999887 2479999999 34 56799
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCC
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSS 182 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~ 182 (272)
|+|++..+++|+ .+...+++++.++|||||++++.++......... +.....+.+++.+ +++
T Consensus 77 D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~-~l~-- 138 (170)
T 3i9f_A 77 DFILFANSFHDM--DDKQHVISEVKRILKDDGRVIIIDWRKENTGIGP-------------PLSIRMDEKDYMG-WFS-- 138 (170)
T ss_dssp EEEEEESCSTTC--SCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS-------------CGGGCCCHHHHHH-HTT--
T ss_pred EEEEEccchhcc--cCHHHHHHHHHHhcCCCCEEEEEEcCccccccCc-------------hHhhhcCHHHHHH-HHh--
Confidence 999999999999 4568999999999999999999887644322110 1112346777764 444
Q ss_pred CcEEEEEEecC
Q 024096 183 GLCVEHLENIG 193 (272)
Q Consensus 183 Gf~v~~~~~~~ 193 (272)
||++.+....+
T Consensus 139 Gf~~~~~~~~~ 149 (170)
T 3i9f_A 139 NFVVEKRFNPT 149 (170)
T ss_dssp TEEEEEEECSS
T ss_pred CcEEEEccCCC
Confidence 99999888765
No 66
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.78 E-value=2.5e-19 Score=150.01 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=93.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCC
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KAN 100 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~ 100 (272)
.++.+.+..+ .+.+|||||||+|..+..|++. +.+|+|+|+|+.|++.|++. .++.++++|+++++ +++
T Consensus 29 l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 29 LFRWLGEVAP--ARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCC
Confidence 3455555543 4579999999999999999986 78999999999999887642 48999999999999 778
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCC
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPD 145 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 145 (272)
+||+|++..++||++ ...+++++.|+|||||+|++..+..+.
T Consensus 99 sfD~v~~~~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 99 SVDVAIAAQAMHWFD---LDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp CEEEEEECSCCTTCC---HHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred cccEEEEeeehhHhh---HHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 999999999998884 468999999999999999997766443
No 67
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.78 E-value=1.8e-18 Score=139.84 Aligned_cols=129 Identities=21% Similarity=0.238 Sum_probs=106.0
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechh
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMI 111 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~ 111 (272)
+.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.+++++...++.+ +++.++|+.+.. +++||+|++..++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV-DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-CCCceEEEECCcH
Confidence 45788999999999999999988655699999999999999999999888754 999999997754 4789999999887
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEe
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLEN 191 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~ 191 (272)
+++ ..+++++.++|+|||++++.++... ...++. .+.+++||.+..+..
T Consensus 136 ~~~-----~~~l~~~~~~L~~gG~l~~~~~~~~-------------------------~~~~~~-~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 136 EIL-----LDLIPQLDSHLNEDGQVIFSGIDYL-------------------------QLPKIE-QALAENSFQIDLKMR 184 (205)
T ss_dssp HHH-----HHHGGGSGGGEEEEEEEEEEEEEGG-------------------------GHHHHH-HHHHHTTEEEEEEEE
T ss_pred HHH-----HHHHHHHHHhcCCCCEEEEEecCcc-------------------------cHHHHH-HHHHHcCCceEEeec
Confidence 765 7899999999999999999655411 233444 344569999988766
Q ss_pred cC
Q 024096 192 IG 193 (272)
Q Consensus 192 ~~ 193 (272)
.+
T Consensus 185 ~~ 186 (205)
T 3grz_A 185 AG 186 (205)
T ss_dssp ET
T ss_pred cC
Confidence 54
No 68
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.78 E-value=6.6e-20 Score=149.74 Aligned_cols=178 Identities=13% Similarity=0.160 Sum_probs=118.1
Q ss_pred HHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHH----HHcCCCCCeEEEEcccCCCC-CC
Q 024096 26 LIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKV----REAGLQDHIRFYLCDYRQLP-KA 99 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~----~~~g~~~~i~~~~~d~~~~~-~~ 99 (272)
.++.+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.+.+.+ ...++ +++.++++|+.+++ .+
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~ 97 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLS 97 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCC
T ss_pred HHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCC
Confidence 445556778899999999999999999998 5889999999999887643333 33455 38999999999988 44
Q ss_pred CCccEEEEec---hh--hccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHH
Q 024096 100 NKYDRIISCG---MI--EHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRV 174 (272)
Q Consensus 100 ~~fD~V~~~~---~~--~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 174 (272)
+. |.|+... .. +|++ +...+++++.++|||||+++++........ ....... .|........+.
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~ 166 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVALNLHAWRP------SVPEVGE--HPEPTPDSADEW 166 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEEEGGGBTT------BCGGGTT--CCCCCHHHHHHH
T ss_pred CC-CEEEEEccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEeccccccc------ccccccc--CCccchHHHHHH
Confidence 44 7766433 22 2553 337899999999999999998543211100 0000110 010000012222
Q ss_pred HHHhhcCCCcEEEEEEecCccHHHHH-HHHHHHHHhhHHHHH
Q 024096 175 TSAMTSSSGLCVEHLENIGIHYYQTL-RCWRKNFMGKQSEIL 215 (272)
Q Consensus 175 ~~~l~~~~Gf~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 215 (272)
+..+++++||++.+++.+..++...+ ..|.+++...++++.
T Consensus 167 l~~~l~~aGf~i~~~~~~~~~~~~~~~~~w~~~~~~~r~~~~ 208 (218)
T 3mq2_A 167 LAPRYAEAGWKLADCRYLEPEEVAGLETSWTRRLHSSRDRFD 208 (218)
T ss_dssp HHHHHHHTTEEEEEEEEECHHHHHHTCCTHHHHHTTCCSSCS
T ss_pred HHHHHHHcCCCceeeeccchhhhhhhHHHHHHHHccccccee
Confidence 33456679999999999887766443 678888765554443
No 69
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.78 E-value=6.7e-19 Score=148.06 Aligned_cols=151 Identities=18% Similarity=0.161 Sum_probs=108.4
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCC---------------------------
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGL--------------------------- 82 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~--------------------------- 82 (272)
+..++.+|||||||+|.++..++.. +. +|+|+|+|+.+++.|+++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 4567889999999999887776664 43 799999999999999987754310
Q ss_pred -CCCeE-EEEcccCCC-C----CCCCccEEEEechhhccC--hhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC
Q 024096 83 -QDHIR-FYLCDYRQL-P----KANKYDRIISCGMIEHVG--HDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL 153 (272)
Q Consensus 83 -~~~i~-~~~~d~~~~-~----~~~~fD~V~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 153 (272)
..++. ++++|+.+. + ..++||+|++..+++|+. .+++..++++++++|||||+++++....... +.
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~-~~---- 205 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS-YM---- 205 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-EE----
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc-ce----
Confidence 01244 899998874 2 246899999999999963 2567889999999999999999986542211 10
Q ss_pred cchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 154 SPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 154 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
.....++ ....+.+++.+. ++++||.++++....
T Consensus 206 ----~g~~~~~-~~~~~~~~l~~~-l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 206 ----VGKREFS-CVALEKGEVEQA-VLDAGFDIEQLLHSP 239 (263)
T ss_dssp ----ETTEEEE-CCCCCHHHHHHH-HHHTTEEEEEEEEEC
T ss_pred ----eCCeEee-ccccCHHHHHHH-HHHCCCEEEEEeecc
Confidence 0001111 123467777754 456999999887764
No 70
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.78 E-value=2e-18 Score=140.61 Aligned_cols=115 Identities=19% Similarity=0.228 Sum_probs=99.6
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
..+...+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.... .+++++++|+.+++++++||
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~fD 116 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFSTAELFD 116 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCCCSCCEE
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCCCCCCcc
Confidence 33444566778899999999999999999987 579999999999999999987654 37999999999988778999
Q ss_pred EEEEechhhccCh-hhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 104 RIISCGMIEHVGH-DYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 104 ~V~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+|++..+++|+++ +....+++++.++|||||++++.+..
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9999999999975 45568899999999999999997654
No 71
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=148.81 Aligned_cols=116 Identities=21% Similarity=0.377 Sum_probs=94.7
Q ss_pred HHHHHcCC--CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCC-------------------
Q 024096 25 VLIEKARV--SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGL------------------- 82 (272)
Q Consensus 25 ~l~~~l~~--~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~------------------- 82 (272)
.+++.+.. .++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|++++...+.
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGE 114 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccc
Confidence 34444443 36889999999999999999998 678999999999999999998765432
Q ss_pred --------------------------------------CCCeEEEEcccCCCC------CCCCccEEEEechhhcc----
Q 024096 83 --------------------------------------QDHIRFYLCDYRQLP------KANKYDRIISCGMIEHV---- 114 (272)
Q Consensus 83 --------------------------------------~~~i~~~~~d~~~~~------~~~~fD~V~~~~~~~~~---- 114 (272)
+.+++++++|+...+ ..++||+|++..+++|+
T Consensus 115 ~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~ 194 (292)
T 3g07_A 115 EGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNW 194 (292)
T ss_dssp ---------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHH
T ss_pred cccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcC
Confidence 258999999988654 46899999999999887
Q ss_pred ChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 115 GHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 115 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+++.+..++++++++|+|||++++..
T Consensus 195 ~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 195 GDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 55578899999999999999999853
No 72
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.77 E-value=2.9e-18 Score=141.88 Aligned_cols=111 Identities=22% Similarity=0.304 Sum_probs=97.1
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANK 101 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~ 101 (272)
..+.+.+...++.+|||+|||+|.++..+++. +. +++|+|+|+.+++.++++... .++.+.++|+.+++ ++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~ 107 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDS 107 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTC
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCC
Confidence 34667777778899999999999999999987 55 999999999999999887532 37999999999887 5689
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
||+|++..+++|++ +...+++++.++|||||++++...
T Consensus 108 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 108 FDLAYSSLALHYVE--DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEEeccccccc--hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 99999999999994 568999999999999999999764
No 73
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.77 E-value=1e-17 Score=138.61 Aligned_cols=105 Identities=26% Similarity=0.370 Sum_probs=94.3
Q ss_pred CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEec-hhh
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCG-MIE 112 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~-~~~ 112 (272)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++....+. ++.++++|+.+++..++||+|++.. +++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNINRKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCSCCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCccCCceEEEEcCcccc
Confidence 6789999999999999999987 78999999999999999999887764 7899999999887448999999998 999
Q ss_pred ccCh-hhHHHHHHHHHhcCccCcEEEEEee
Q 024096 113 HVGH-DYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 113 ~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
|++. ++...+++++.++|||||++++...
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9943 5778999999999999999998544
No 74
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.77 E-value=6.6e-18 Score=136.06 Aligned_cols=151 Identities=18% Similarity=0.206 Sum_probs=115.6
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANK 101 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~ 101 (272)
+..++..+ .++ +|||+|||+|.++..+++. +.+++|+|+|+.+++.++++....+. ++.+.++|+.+.+ ++++
T Consensus 21 l~~~~~~~--~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~ 94 (202)
T 2kw5_A 21 LVSVANQI--PQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADA 94 (202)
T ss_dssp HHHHHHHS--CSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTT
T ss_pred HHHHHHhC--CCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCC
Confidence 34445544 456 9999999999999999986 78999999999999999999987765 7999999999887 5689
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcC
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSS 181 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 181 (272)
||+|++. +.|++.++...+++++.++|||||++++.++......+.. . .........+.+++.+ +++
T Consensus 95 fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~l~~-~l~- 161 (202)
T 2kw5_A 95 WEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNT---G------GPKDLDLLPKLETLQS-ELP- 161 (202)
T ss_dssp CSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTS---C------CSSSGGGCCCHHHHHH-HCS-
T ss_pred ccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCC---C------CCCcceeecCHHHHHH-Hhc-
Confidence 9999995 4566667789999999999999999999877643322100 0 0001123567888874 444
Q ss_pred CCcEEEEEEecC
Q 024096 182 SGLCVEHLENIG 193 (272)
Q Consensus 182 ~Gf~v~~~~~~~ 193 (272)
||+++.++...
T Consensus 162 -Gf~v~~~~~~~ 172 (202)
T 2kw5_A 162 -SLNWLIANNLE 172 (202)
T ss_dssp -SSCEEEEEEEE
T ss_pred -CceEEEEEEEE
Confidence 99998877754
No 75
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.77 E-value=6.5e-18 Score=145.47 Aligned_cols=119 Identities=15% Similarity=0.136 Sum_probs=96.4
Q ss_pred HHHHHHcC--CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC------CCCCeEEEEcccCC
Q 024096 24 SVLIEKAR--VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAG------LQDHIRFYLCDYRQ 95 (272)
Q Consensus 24 ~~l~~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g------~~~~i~~~~~d~~~ 95 (272)
..+++.+. ..++.+|||+|||+|.++..+++.++.+++|+|+|+.+++.++++....+ ...++.++++|+.+
T Consensus 22 ~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 101 (313)
T 3bgv_A 22 GEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSK 101 (313)
T ss_dssp HHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTT
T ss_pred HHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccc
Confidence 44444443 23778999999999999999988667799999999999999999887542 12379999999988
Q ss_pred CC-------CCCCccEEEEechhhcc--ChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 96 LP-------KANKYDRIISCGMIEHV--GHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 96 ~~-------~~~~fD~V~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
.+ ++++||+|++..+++|+ +.++...+++++.++|||||+++++.+.
T Consensus 102 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 102 ELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp SCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 64 24589999999999987 3356789999999999999999997764
No 76
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.77 E-value=2.3e-19 Score=160.50 Aligned_cols=173 Identities=16% Similarity=0.183 Sum_probs=125.4
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCe
Q 024096 7 IFKSEHEDLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHI 86 (272)
Q Consensus 7 ~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i 86 (272)
++......+.+......+.+++.+.+.++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++ +.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~ 154 (416)
T 4e2x_A 80 YHSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRT 154 (416)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEEC
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcce
Confidence 3334445677788888899999999889999999999999999999986 77999999999999998876 332111
Q ss_pred E-EEEcccCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccC
Q 024096 87 R-FYLCDYRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFP 164 (272)
Q Consensus 87 ~-~~~~d~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p 164 (272)
. +...+...++ ++++||+|++..+++|++ ++..++++++++|||||++++..+...... .... +.....+
T Consensus 155 ~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~-----~~~~-~~~~~~~ 226 (416)
T 4e2x_A 155 DFFEKATADDVRRTEGPANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIV-----AKTS-FDQIFDE 226 (416)
T ss_dssp SCCSHHHHHHHHHHHCCEEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHH-----HHTC-GGGCSTT
T ss_pred eeechhhHhhcccCCCCEEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhh-----hhcc-hhhhhhh
Confidence 1 2223344444 458999999999999994 679999999999999999999765421100 0001 1111123
Q ss_pred CCCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 165 GGCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 165 ~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
+..+.+.+++. .+++++||++.++..+.
T Consensus 227 ~~~~~s~~~l~-~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 227 HFFLFSATSVQ-GMAQRCGFELVDVQRLP 254 (416)
T ss_dssp CCEECCHHHHH-HHHHHTTEEEEEEEEEC
T ss_pred hhhcCCHHHHH-HHHHHcCCEEEEEEEcc
Confidence 33456777776 45567999999888754
No 77
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.77 E-value=1.5e-17 Score=134.65 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=96.8
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-CCCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-PKANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~~~~~f 102 (272)
..+++.+.+.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++++..+++++++++++|+.+. +..+.|
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCC
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCC
Confidence 45777888889999999999999999999998 8899999999999999999999999876899999999884 444689
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|+|++...+ +.. +++++.++|||||++++....
T Consensus 124 D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 124 EAVFIGGGG------SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp SEEEECSCC------CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred CEEEECCcc------cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 999987643 235 999999999999999986543
No 78
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.77 E-value=2.1e-18 Score=140.95 Aligned_cols=156 Identities=20% Similarity=0.251 Sum_probs=112.9
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC---C--C
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL---P--K 98 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~---~--~ 98 (272)
..+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++ .++.+..+|+.++ + .
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccccc
Confidence 44566666667799999999999999999987 88999999999999999877 3678888888776 3 4
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCc---chhh---hhcccCCCCCCCHH
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLS---PGFI---KEYIFPGGCLPSLG 172 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~---~~~~---~~~~~p~~~~~~~~ 172 (272)
..+||+|++..+++ . .++..+++++.++|||||++++.++.........+... ..+. .........+.+.+
T Consensus 114 ~~~fD~v~~~~~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (227)
T 3e8s_A 114 GKDYDLICANFALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLA 190 (227)
T ss_dssp CCCEEEEEEESCCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHH
T ss_pred CCCccEEEECchhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHH
Confidence 45699999999998 4 45689999999999999999998765433221111000 0000 00000011235788
Q ss_pred HHHHHhhcCCCcEEEEEEe
Q 024096 173 RVTSAMTSSSGLCVEHLEN 191 (272)
Q Consensus 173 ~~~~~l~~~~Gf~v~~~~~ 191 (272)
++.+ +++++||.++++..
T Consensus 191 ~~~~-~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 191 SWLN-ALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHH-HHHHTTEEEEEEEC
T ss_pred HHHH-HHHHcCCeEEEEec
Confidence 8875 45569999998876
No 79
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.77 E-value=2.6e-17 Score=132.91 Aligned_cols=114 Identities=17% Similarity=0.221 Sum_probs=99.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CC
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KA 99 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~ 99 (272)
....+++.+.+.++.+|||+|||+|.++..+++. +..+++++|+|+.+++.+++++...++ ++++++++|+.+.. ..
T Consensus 28 i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 28 VRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDL 106 (204)
T ss_dssp HHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTS
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcC
Confidence 3356788888999999999999999999999998 568999999999999999999998888 58999999996655 44
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++||+|++..+++ +...+++++.++|||||++++...
T Consensus 107 ~~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 107 PDPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CCCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 7899999987765 347999999999999999998644
No 80
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.76 E-value=9.4e-18 Score=147.72 Aligned_cols=160 Identities=14% Similarity=0.136 Sum_probs=120.1
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC
Q 024096 23 VSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 23 ~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 100 (272)
...+++.++ +.++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++. ++++++.+|+.+ +.+.
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~ 261 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPK 261 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCC
Confidence 345666666 677899999999999999999998 7889999999 8888776532 489999999886 4223
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC----cchhhhhcccCCCCCCCHHHHHH
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL----SPGFIKEYIFPGGCLPSLGRVTS 176 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~ 176 (272)
. |+|++..++||+++++...++++++++|||||++++.+...+......... ..........+++...+.+++.+
T Consensus 262 ~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ 340 (368)
T 3reo_A 262 G-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQA 340 (368)
T ss_dssp C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHH
T ss_pred C-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHH
Confidence 3 999999999999988888999999999999999999988866542211000 00111111124566678888874
Q ss_pred HhhcCCCcEEEEEEecC
Q 024096 177 AMTSSSGLCVEHLENIG 193 (272)
Q Consensus 177 ~l~~~~Gf~v~~~~~~~ 193 (272)
+++++||+++++....
T Consensus 341 -ll~~AGF~~v~~~~~~ 356 (368)
T 3reo_A 341 -LAMASGFRGFKVASCA 356 (368)
T ss_dssp -HHHHTTCCEEEEEEEE
T ss_pred -HHHHCCCeeeEEEEeC
Confidence 5567999998877653
No 81
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.76 E-value=1.3e-17 Score=146.65 Aligned_cols=160 Identities=16% Similarity=0.103 Sum_probs=121.5
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC
Q 024096 23 VSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 23 ~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 100 (272)
...+++.++ ..++.+|||||||+|..+..++++ ++.+++++|+ +.+++.+++. ++++++.+|+.+ +.+.
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p~ 259 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVPS 259 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCCC
Confidence 355677776 778899999999999999999988 7889999999 8887776542 489999999987 5223
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC-cchhh--hhc-ccCCCCCCCHHHHHH
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL-SPGFI--KEY-IFPGGCLPSLGRVTS 176 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-~~~~~--~~~-~~p~~~~~~~~~~~~ 176 (272)
. |+|++..++|++++++...++++++++|||||++++.+...++........ ....+ ... ..+++...+.+++.+
T Consensus 260 ~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ 338 (364)
T 3p9c_A 260 G-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQA 338 (364)
T ss_dssp C-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHH
T ss_pred C-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHH
Confidence 3 999999999999988888999999999999999999988866542211100 00011 111 235566678888874
Q ss_pred HhhcCCCcEEEEEEecC
Q 024096 177 AMTSSSGLCVEHLENIG 193 (272)
Q Consensus 177 ~l~~~~Gf~v~~~~~~~ 193 (272)
+++++||+++++....
T Consensus 339 -ll~~AGF~~v~~~~~~ 354 (364)
T 3p9c_A 339 -LARGAGFTGVKSTYIY 354 (364)
T ss_dssp -HHHHTTCCEEEEEEEE
T ss_pred -HHHHCCCceEEEEEcC
Confidence 5567999998877654
No 82
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.76 E-value=2.5e-19 Score=147.29 Aligned_cols=163 Identities=18% Similarity=0.210 Sum_probs=106.7
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCC-HHHHHHH---HHHHHHcCCCCCeEEEEcccCCCCC--CCCccEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLS-EEQLKYA---EIKVREAGLQDHIRFYLCDYRQLPK--ANKYDRI 105 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s-~~~~~~a---~~~~~~~g~~~~i~~~~~d~~~~~~--~~~fD~V 105 (272)
.++.+|||||||+|.++..+++. ++.+|+|+|+| +.+++.| ++++...+++ ++.++++|+.+++. .+.+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 57889999999999999999976 78899999999 6666665 7777777774 79999999999862 2445555
Q ss_pred EEechhhccC---hhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHH-----HHHHH
Q 024096 106 ISCGMIEHVG---HDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLG-----RVTSA 177 (272)
Q Consensus 106 ~~~~~~~~~~---~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-----~~~~~ 177 (272)
.++....+.. ..+...++++++++|||||++++....... +.... ..... . ..++.. ++. .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~--~~~~~---~~~~~--~---~~~~~~~~~~~el~-~ 170 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDS--YEEAE---IKKRG--L---PLLSKAYFLSEQYK-A 170 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC------------------------CCHHHHHSHHHH-H
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEecccc--chhch---hhhcC--C---CCCChhhcchHHHH-H
Confidence 5543322110 012256899999999999999984322211 11000 00000 0 111211 244 4
Q ss_pred hhcCCCcEEEEEEecCccHHHHH-HHHHHHH
Q 024096 178 MTSSSGLCVEHLENIGIHYYQTL-RCWRKNF 207 (272)
Q Consensus 178 l~~~~Gf~v~~~~~~~~~~~~~~-~~~~~~~ 207 (272)
+.+++||++...+.++.+|..++ ..|..++
T Consensus 171 ~l~~aGf~v~~~~~~~~~~~~~~~~~w~~~~ 201 (225)
T 3p2e_A 171 ELSNSGFRIDDVKELDNEYVKQFNSLWAKRL 201 (225)
T ss_dssp HHHHHTCEEEEEEEECHHHHTTCCSHHHHHH
T ss_pred HHHHcCCCeeeeeecCHHHHHHHHHHHhccc
Confidence 55569999999999998887665 4565554
No 83
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.76 E-value=7.3e-18 Score=133.98 Aligned_cols=110 Identities=14% Similarity=0.048 Sum_probs=90.7
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccEEEEe
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDRIISC 108 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~V~~~ 108 (272)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ +++++++.+...++ .+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 4568899999999999999999997 88999999999999999999999888 68999998887754 45789999987
Q ss_pred chhhcc-------ChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 109 GMIEHV-------GHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 109 ~~~~~~-------~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
....+. ..+....+++++.++|||||++++..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 322211 1245568899999999999999997654
No 84
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.76 E-value=3.2e-18 Score=145.70 Aligned_cols=164 Identities=20% Similarity=0.101 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHcCC--CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc----------------
Q 024096 19 QMRKVSVLIEKARV--SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA---------------- 80 (272)
Q Consensus 19 q~~~~~~l~~~l~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~---------------- 80 (272)
+...+..+.+.+.. .++.+|||||||+|..+..++...+.+|+|+|+|+.+++.|+++++..
T Consensus 54 ~~~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~ 133 (289)
T 2g72_A 54 GPWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLI 133 (289)
T ss_dssp HHHHHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHh
Confidence 33334455555432 367899999999999555444435779999999999999998865421
Q ss_pred -CCC------------CCeEEEEcccCC-CC------CCCCccEEEEechhhccCh--hhHHHHHHHHHhcCccCcEEEE
Q 024096 81 -GLQ------------DHIRFYLCDYRQ-LP------KANKYDRIISCGMIEHVGH--DYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 81 -g~~------------~~i~~~~~d~~~-~~------~~~~fD~V~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i 138 (272)
+.. ..+.++++|+.+ .+ ++++||+|++..+++|++. +++..+++++.++|||||++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 134 EGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp HCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 100 015678889887 43 2356999999999999543 4789999999999999999999
Q ss_pred EeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 139 QFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
........ +. . ....+ .....+.+++.+. ++++||.++.+....
T Consensus 214 ~~~~~~~~-~~-~-------~~~~~-~~~~~~~~~l~~~-l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 214 IGALEESW-YL-A-------GEARL-TVVPVSEEEVREA-LVRSGYKVRDLRTYI 257 (289)
T ss_dssp EEEESCCE-EE-E-------TTEEE-ECCCCCHHHHHHH-HHHTTEEEEEEEEEE
T ss_pred EEecCcce-EE-c-------CCeee-eeccCCHHHHHHH-HHHcCCeEEEeeEee
Confidence 75432111 00 0 00000 0234577777754 456999998887765
No 85
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.76 E-value=1.6e-17 Score=140.36 Aligned_cols=107 Identities=13% Similarity=0.216 Sum_probs=92.8
Q ss_pred HHHcCCCCCCEEEEECCCchHHH-HHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEE
Q 024096 27 IEKARVSKGQEVLDIGCGWGTLA-IEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRI 105 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~G~~~-~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V 105 (272)
...+.+.++++|||||||+|.++ ..+++.++++|+|+|+|+.+++.|+++++..|+ ++++++++|+.+++ +++||+|
T Consensus 115 ~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-d~~FDvV 192 (298)
T 3fpf_A 115 AALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-GLEFDVL 192 (298)
T ss_dssp HHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG-GCCCSEE
T ss_pred HHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC-CCCcCEE
Confidence 35678899999999999999766 445554789999999999999999999999898 79999999999886 6889999
Q ss_pred EEechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 106 ISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
++... + .+...+++++.++|||||++++..
T Consensus 193 ~~~a~---~--~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 193 MVAAL---A--EPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EECTT---C--SCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EECCC---c--cCHHHHHHHHHHHcCCCcEEEEEc
Confidence 98654 3 455899999999999999999865
No 86
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.75 E-value=3.3e-17 Score=138.52 Aligned_cols=163 Identities=10% Similarity=0.128 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHcC-CCCCCEEEEECCCc---hHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc
Q 024096 17 VGQMRKVSVLIEKAR-VSKGQEVLDIGCGW---GTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC 91 (272)
Q Consensus 17 ~aq~~~~~~l~~~l~-~~~~~~vLDiG~G~---G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~ 91 (272)
..++..+..+++.+. ..+..+|||||||+ |.++..+.+. ++.+|+++|+|+.+++.+++++.. .++++++++
T Consensus 59 ~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~ 135 (274)
T 2qe6_A 59 IENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTA 135 (274)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEEC
T ss_pred HHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEe
Confidence 445555666666665 33458999999999 9888776665 788999999999999999998743 258999999
Q ss_pred ccCCCC------------CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhh
Q 024096 92 DYRQLP------------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIK 159 (272)
Q Consensus 92 d~~~~~------------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 159 (272)
|+.+.+ +.++||+|++..++||+++++...+++++.++|+|||+|++++..... ..........+.
T Consensus 136 D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~~~~~~~~~~~~ 213 (274)
T 2qe6_A 136 DVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG--LPAQQKLARITR 213 (274)
T ss_dssp CTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS--CHHHHHHHHHHH
T ss_pred eCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc--hHHHHHHHHHHH
Confidence 997631 124899999999999998777899999999999999999998877432 111111111111
Q ss_pred hcccCCCCCCCHHHHHHHhhcCCCcEEEE
Q 024096 160 EYIFPGGCLPSLGRVTSAMTSSSGLCVEH 188 (272)
Q Consensus 160 ~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~ 188 (272)
... ......+.+++.+. . .||++++
T Consensus 214 ~~~-~~~~~~s~~ei~~~-l--~G~~l~~ 238 (274)
T 2qe6_A 214 ENL-GEGWARTPEEIERQ-F--GDFELVE 238 (274)
T ss_dssp HHH-SCCCCBCHHHHHHT-T--TTCEECT
T ss_pred hcC-CCCccCCHHHHHHH-h--CCCeEcc
Confidence 111 12345677777654 4 5887754
No 87
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.75 E-value=1e-17 Score=142.65 Aligned_cols=118 Identities=23% Similarity=0.323 Sum_probs=98.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC---CCeEEEEcccCCCC---
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQ---DHIRFYLCDYRQLP--- 97 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~---~~i~~~~~d~~~~~--- 97 (272)
+.+.+.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+.. .++.+..+|+.+++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc
Confidence 44555555567889999999999999999997 779999999999999999887543321 36789999988875
Q ss_pred -CCCCccEEEEe-chhhccCh-----hhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 98 -KANKYDRIISC-GMIEHVGH-----DYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 98 -~~~~fD~V~~~-~~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++++||+|++. .+++|+++ ++...+++++.++|||||++++....
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 56899999998 89999976 55899999999999999999987643
No 88
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.75 E-value=3.2e-17 Score=135.25 Aligned_cols=106 Identities=20% Similarity=0.308 Sum_probs=91.4
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEE-echh
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIIS-CGMI 111 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~-~~~~ 111 (272)
.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .++.++++|+.+++.+++||+|++ ..++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 111 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGRKFSAVVSMFSSV 111 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSSCEEEEEECTTGG
T ss_pred CCCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCCCCcEEEEcCchH
Confidence 57789999999999999999987 459999999999999998863 368999999998876678999996 4599
Q ss_pred hccCh-hhHHHHHHHHHhcCccCcEEEEEeecCCC
Q 024096 112 EHVGH-DYMEEFFGCCESLLATHGLLVLQFISAPD 145 (272)
Q Consensus 112 ~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 145 (272)
+|+++ ++...+++++.++|||||++++.++..+.
T Consensus 112 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 112 GYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp GGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 99854 56789999999999999999997665443
No 89
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=3.2e-17 Score=136.52 Aligned_cols=119 Identities=24% Similarity=0.422 Sum_probs=102.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 99 (272)
...+..+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++....+. ++.++++|+.+++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 103 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK 103 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC
Confidence 445566677776677889999999999999999986 78999999999999999999987764 699999999988755
Q ss_pred CCccEEEEe-chhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 100 NKYDRIISC-GMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 100 ~~fD~V~~~-~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++||+|++. ..+++++.++...+++++.++|+|||.+++...
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 789999987 456666667788999999999999999998644
No 90
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.75 E-value=4.1e-17 Score=130.08 Aligned_cols=134 Identities=23% Similarity=0.344 Sum_probs=109.4
Q ss_pred HHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccE
Q 024096 26 LIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDR 104 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~ 104 (272)
+++.+ +.++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. .++.++++|+.+.+ ++++||+
T Consensus 39 ~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 39 LIDAM-APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp HHHHH-SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEE
T ss_pred HHHHh-ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeE
Confidence 45554 467889999999999999999987 789999999999999998874 36899999999877 5679999
Q ss_pred EEEe-chhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCC
Q 024096 105 IISC-GMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSG 183 (272)
Q Consensus 105 V~~~-~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~G 183 (272)
|++. .+++|++.++...+++++.++|+|||++++...... ..+..++.+. ++++|
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~-----------------------~~~~~~~~~~-l~~~G 166 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR-----------------------GWVFGDFLEV-AERVG 166 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS-----------------------SCCHHHHHHH-HHHHT
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC-----------------------CcCHHHHHHH-HHHcC
Confidence 9998 788998877788999999999999999998654311 1355666644 44689
Q ss_pred cEEEEEEe
Q 024096 184 LCVEHLEN 191 (272)
Q Consensus 184 f~v~~~~~ 191 (272)
|.+.....
T Consensus 167 f~~~~~~~ 174 (195)
T 3cgg_A 167 LELENAFE 174 (195)
T ss_dssp EEEEEEES
T ss_pred CEEeeeec
Confidence 99887754
No 91
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.75 E-value=1.4e-17 Score=131.17 Aligned_cols=115 Identities=20% Similarity=0.217 Sum_probs=97.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-CC-
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-LP- 97 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~~- 97 (272)
.....+++.+...++.+|||+|||+|.++..+++. ++.+++++|+++.+++.+++++...++++++ ++++|..+ ++
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~ 90 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD 90 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG
T ss_pred HHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc
Confidence 33466778888889999999999999999999988 6789999999999999999999998887688 88888754 33
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
..++||+|++..+++| ..+++++.++|||||++++....
T Consensus 91 ~~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CCSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred cCCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 2278999999998887 47899999999999999986553
No 92
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.75 E-value=5.4e-18 Score=138.59 Aligned_cols=125 Identities=17% Similarity=0.168 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHcCCC--------------CCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH
Q 024096 15 LEVGQMRKVSVLIEKARVS--------------KGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVRE 79 (272)
Q Consensus 15 l~~aq~~~~~~l~~~l~~~--------------~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~ 79 (272)
|..+|.+.++.+...+.+. ++.+|||||||+|.++..+++. ++..|+|+|+|+.+++.|++++..
T Consensus 1 l~~~q~~~~~~~~~~~~~~~~~~~~d~~~~f~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~ 80 (218)
T 3dxy_A 1 MGSGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE 80 (218)
T ss_dssp ------CHHHHHHHHHBCCCCSSCCCHHHHHSSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhHHhCCCCCCCCCCHHHHcCCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH
Confidence 3456777777777766543 5789999999999999999988 778999999999999999999998
Q ss_pred cCCCCCeEEEEcccCCC-C---CCCCccEEEEechhhccChhhH------HHHHHHHHhcCccCcEEEEEe
Q 024096 80 AGLQDHIRFYLCDYRQL-P---KANKYDRIISCGMIEHVGHDYM------EEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 80 ~g~~~~i~~~~~d~~~~-~---~~~~fD~V~~~~~~~~~~~~~~------~~~l~~~~~~LkpgG~l~i~~ 140 (272)
.++. ++.++++|+.++ + ++++||.|++.....+...... ..+++++.++|||||++++.+
T Consensus 81 ~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 81 EGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp TTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCC-cEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 8875 799999998874 2 5689999999854443221111 259999999999999999864
No 93
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.74 E-value=2.6e-17 Score=132.07 Aligned_cols=114 Identities=14% Similarity=0.167 Sum_probs=95.7
Q ss_pred HcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccE
Q 024096 29 KARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDR 104 (272)
Q Consensus 29 ~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~ 104 (272)
...+.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.+++++...++.++++++++|+.+++ .+++||+
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceE
Confidence 335678899999999999999999987 457999999999999999999999888678999999998875 4578999
Q ss_pred EEEechhhc-------cChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 105 IISCGMIEH-------VGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 105 V~~~~~~~~-------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|++...+.. ...++...+++++.++|||||++++..+.
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 999875511 11234567999999999999999997654
No 94
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.74 E-value=5e-17 Score=129.44 Aligned_cols=119 Identities=23% Similarity=0.404 Sum_probs=103.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-CeEEEEcccCCCCCCC
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQD-HIRFYLCDYRQLPKAN 100 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~-~i~~~~~d~~~~~~~~ 100 (272)
..+.+++.+...++.+|||+|||+|.++..+++. +.+++|+|+++.+++.+++++...++++ ++++.++|+.+..+++
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 3456778888888999999999999999999987 8899999999999999999999888753 4999999998865667
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+||+|++..++++. .+....+++++.++|+|||.+++....
T Consensus 119 ~~D~v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 119 KYNKIITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp CEEEEEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CceEEEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 89999998887762 356789999999999999999997664
No 95
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.74 E-value=2.3e-17 Score=131.64 Aligned_cols=108 Identities=11% Similarity=0.112 Sum_probs=94.1
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CCCCccEEEEec
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KANKYDRIISCG 109 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~~~fD~V~~~~ 109 (272)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.+++++..+++ ++++++++|+.+.+ ++++||+|+++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 57889999999999999988876556899999999999999999999888 68999999998865 368999999998
Q ss_pred hhhccChhhHHHHHHHHHh--cCccCcEEEEEeec
Q 024096 110 MIEHVGHDYMEEFFGCCES--LLATHGLLVLQFIS 142 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~--~LkpgG~l~i~~~~ 142 (272)
++++. .++...+++++.+ +|+|||++++....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 87764 2467889999998 99999999997654
No 96
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.74 E-value=7.7e-18 Score=144.24 Aligned_cols=109 Identities=10% Similarity=0.026 Sum_probs=86.7
Q ss_pred CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-----CeEEEEccc------CCCC---CC
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQD-----HIRFYLCDY------RQLP---KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~-----~i~~~~~d~------~~~~---~~ 99 (272)
++.+|||||||+|..+..++...+.+|+|+|+|+.+++.|+++....+... ++.+.+.|+ .+++ ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 578999999999986666665546799999999999999999987665321 267888887 3221 45
Q ss_pred CCccEEEEechhhcc-ChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 100 NKYDRIISCGMIEHV-GHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++||+|++..+++++ ..++...++++++++|||||+++++++.
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 799999999999875 3345689999999999999999997764
No 97
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.74 E-value=1.1e-17 Score=142.57 Aligned_cols=150 Identities=19% Similarity=0.219 Sum_probs=101.5
Q ss_pred CCCCEEEEECCCchHHHHHH----HHc-cCCEE--EEEcCCHHHHHHHHHHHHHc-CCCCCeE--EEEcccCCCC-----
Q 024096 33 SKGQEVLDIGCGWGTLAIEI----VKQ-TGCKY--TGITLSEEQLKYAEIKVREA-GLQDHIR--FYLCDYRQLP----- 97 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l----~~~-~~~~v--~gvd~s~~~~~~a~~~~~~~-g~~~~i~--~~~~d~~~~~----- 97 (272)
.++.+|||||||+|.++..+ +.. ++..+ +|+|+|+.|++.+++++... ++ .++. +..++.++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcc
Confidence 56789999999999876543 333 45644 99999999999999998654 33 3454 4566665432
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhccc-CCCCCCCHHHH
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIF-PGGCLPSLGRV 174 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~ 174 (272)
++++||+|++..+++|+ +++..++++++++|||||++++........ +... ...+...... ......+.+++
T Consensus 130 ~~~~~~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~ 204 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYV--KDIPATLKFFHSLLGTNAKMLIIVVSGSSG-WDKL--WKKYGSRFPQDDLCQYITSDDL 204 (292)
T ss_dssp TTCCCCEEEEEEESCGGGC--SCHHHHHHHHHHTEEEEEEEEEEEECTTSH-HHHH--HHHHGGGSCCCTTCCCCCHHHH
T ss_pred ccCCCceeEEEEeeeeeec--CCHHHHHHHHHHHcCCCcEEEEEEecCCcc-HHHH--HHHHHHhccCCCcccCCCHHHH
Confidence 35789999999999999 566899999999999999999975542111 1100 0011110000 11245677777
Q ss_pred HHHhhcCCCcEEEEE
Q 024096 175 TSAMTSSSGLCVEHL 189 (272)
Q Consensus 175 ~~~l~~~~Gf~v~~~ 189 (272)
.+ +++++||.+...
T Consensus 205 ~~-~l~~aGf~~~~~ 218 (292)
T 2aot_A 205 TQ-MLDNLGLKYECY 218 (292)
T ss_dssp HH-HHHHHTCCEEEE
T ss_pred HH-HHHHCCCceEEE
Confidence 64 555699987764
No 98
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.73 E-value=1.9e-17 Score=138.68 Aligned_cols=152 Identities=18% Similarity=0.164 Sum_probs=111.3
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCC---------------------------
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGL--------------------------- 82 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~--------------------------- 82 (272)
+..++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 4467789999999999999988876 44 999999999999999988754320
Q ss_pred -CCCe-EEEEcccCCCC--CC---CCccEEEEechhhccCh--hhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC
Q 024096 83 -QDHI-RFYLCDYRQLP--KA---NKYDRIISCGMIEHVGH--DYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL 153 (272)
Q Consensus 83 -~~~i-~~~~~d~~~~~--~~---~~fD~V~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 153 (272)
..++ .+.++|+.+.+ ++ ++||+|++..+++|++. +++..+++++.++|||||++++.+..... .+..
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~--- 207 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-YYMI--- 207 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EEEE---
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-eEEc---
Confidence 0127 99999998864 34 78999999999995543 47789999999999999999998754322 1000
Q ss_pred cchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecCc
Q 024096 154 SPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIGI 194 (272)
Q Consensus 154 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~ 194 (272)
....+ .....+.+++.+ +++++||.++.+.....
T Consensus 208 -----~~~~~-~~~~~~~~~~~~-~l~~aGf~~~~~~~~~~ 241 (265)
T 2i62_A 208 -----GEQKF-SSLPLGWETVRD-AVEEAGYTIEQFEVISQ 241 (265)
T ss_dssp -----TTEEE-ECCCCCHHHHHH-HHHHTTCEEEEEEEECC
T ss_pred -----CCccc-cccccCHHHHHH-HHHHCCCEEEEEEEecc
Confidence 00000 112345667764 45569999998887653
No 99
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.73 E-value=1.7e-17 Score=146.36 Aligned_cols=158 Identities=15% Similarity=0.155 Sum_probs=118.0
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC
Q 024096 23 VSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 23 ~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 100 (272)
...+++.++ +.++.+|||||||+|..+..++++ ++.+++++|+ +.+++.+++. ++++++.+|+.+ +.+.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CCCC
Confidence 356777776 677899999999999999999998 7789999999 9888877642 369999999987 5223
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccC-cchhhhh--cccCCCCCCCHHHHHHH
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRL-SPGFIKE--YIFPGGCLPSLGRVTSA 177 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-~~~~~~~--~~~p~~~~~~~~~~~~~ 177 (272)
||+|++..++||+++++...++++++++|||||++++.+...+......... ....+.. ...+++...+.+++.+
T Consensus 268 -~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~- 345 (372)
T 1fp1_D 268 -GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEK- 345 (372)
T ss_dssp -EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHH-
T ss_pred -CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHH-
Confidence 9999999999999877667999999999999999999987765542111000 0011111 1123455567888874
Q ss_pred hhcCCCcEEEEEEe
Q 024096 178 MTSSSGLCVEHLEN 191 (272)
Q Consensus 178 l~~~~Gf~v~~~~~ 191 (272)
+++++||+++++..
T Consensus 346 ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 346 LSKLSGFSKFQVAC 359 (372)
T ss_dssp HHHHTTCSEEEEEE
T ss_pred HHHHCCCceEEEEE
Confidence 55569999887766
No 100
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.72 E-value=4.3e-17 Score=142.41 Aligned_cols=176 Identities=20% Similarity=0.174 Sum_probs=128.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
+.+++.+...++.+|||||||+|.++..+++....+|+|+|+|+ +++.++++++.+++.++++++++|+.+++.+++||
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D 118 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVD 118 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEE
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCcee
Confidence 56667777778999999999999999999987456999999996 88999999999998789999999999987557899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCC-----C-ccccccCcchhhhhcccCCCCCCCHHHHHHH
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPD-----Q-CYDEYRLSPGFIKEYIFPGGCLPSLGRVTSA 177 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-----~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 177 (272)
+|++..+++|+..+.....+.++.++|||||.+++....... . .+.+......++....+++..++........
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~~~ 198 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVD 198 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHHHH
T ss_pred EEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhccccCcccccccCcccHHHhhhHHHh
Confidence 999999999987777778888999999999999864332110 0 0000000112233345677777777665422
Q ss_pred hhcCCCc--EEEEEEecCccHHHHHHHHH
Q 024096 178 MTSSSGL--CVEHLENIGIHYYQTLRCWR 204 (272)
Q Consensus 178 l~~~~Gf--~v~~~~~~~~~~~~~~~~~~ 204 (272)
.|| .+....+++.+|..++..|.
T Consensus 199 ----~~f~~p~~d~~~~~~~~~~~~~~~~ 223 (348)
T 2y1w_A 199 ----EYFRQPVVDTFDIRILMAKSVKYTV 223 (348)
T ss_dssp ----HHHTSCEEECCCGGGBCBCCEEEEE
T ss_pred ----hhccCCeEEeECCeeecCcceEEEE
Confidence 344 45556666666665555554
No 101
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.72 E-value=1.3e-16 Score=131.14 Aligned_cols=108 Identities=19% Similarity=0.262 Sum_probs=90.1
Q ss_pred CCCCCCEEEEECCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccEEEE
Q 024096 31 RVSKGQEVLDIGCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDRIIS 107 (272)
Q Consensus 31 ~~~~~~~vLDiG~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~V~~ 107 (272)
.+.++.+|||+||| +|.++..+++..+.+|+|+|+++.+++.+++++..+++ +++++++|+..+. ++++||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEE
Confidence 45688999999999 99999999987578999999999999999999999887 7999999975443 4589999999
Q ss_pred echhhccCh-----------------hhHHHHHHHHHhcCccCcEEEEEe
Q 024096 108 CGMIEHVGH-----------------DYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 108 ~~~~~~~~~-----------------~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+..+.+.++ +....+++++.++|||||++++..
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 977765432 123789999999999999999853
No 102
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.72 E-value=6.3e-17 Score=132.14 Aligned_cols=141 Identities=18% Similarity=0.199 Sum_probs=105.1
Q ss_pred CCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechhhc
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMIEH 113 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~~~ 113 (272)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ ++.++++|+.+++ ++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999888764 9999999999999876 5789999998888 5679999999999999
Q ss_pred cChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 114 VGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
+ .++..+++++.++|+|||++++.++............. .............+.+++.+ +++++||+++++....
T Consensus 115 ~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~-~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 115 V--DDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKN--KEKSVFYKNARFFSTEELMD-LMRKAGFEEFKVVQTL 189 (219)
T ss_dssp S--SCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT--TTC-CCSTTCCCCCHHHHHH-HHHHTTCEEEEEEEEC
T ss_pred c--cCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH--hcCcchhcccccCCHHHHHH-HHHHCCCeEEEEeccc
Confidence 9 45689999999999999999998765322110000000 00011112234567788875 4556999998876643
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.72 E-value=5e-17 Score=131.70 Aligned_cols=113 Identities=18% Similarity=0.124 Sum_probs=99.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K 98 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~ 98 (272)
......+++.+...++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++...+++ ++++.++|+.+.. .
T Consensus 63 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 140 (210)
T 3lbf_A 63 PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQA 140 (210)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCcc
Confidence 345677888888899999999999999999999997 889999999999999999999988875 7999999998866 5
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
.++||+|++..+++|+++ ++.+.|||||++++....
T Consensus 141 ~~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 579999999999999864 478999999999996554
No 104
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.71 E-value=5.5e-17 Score=134.59 Aligned_cols=109 Identities=18% Similarity=0.146 Sum_probs=94.4
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC------CCccEE
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA------NKYDRI 105 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~------~~fD~V 105 (272)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..+++++++|+.+.+.. ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEE
Confidence 467889999999999999999997 4599999999999999998762 24799999999886521 359999
Q ss_pred EEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCC
Q 024096 106 ISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPD 145 (272)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 145 (272)
++..+++|+++++...+++++.++|||||++++.++..+.
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 9999999998778899999999999999999998876543
No 105
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=2e-16 Score=132.53 Aligned_cols=114 Identities=18% Similarity=0.226 Sum_probs=95.1
Q ss_pred HHHHcCCC-CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CCCC
Q 024096 26 LIEKARVS-KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KANK 101 (272)
Q Consensus 26 l~~~l~~~-~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~~~ 101 (272)
+...+... ++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++..+++.++++++++|+.+.+ ++++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 44455677 8899999999999999999988445999999999999999999999999888999999998876 3689
Q ss_pred ccEEEEechhhcc------------------ChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 102 YDRIISCGMIEHV------------------GHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 102 fD~V~~~~~~~~~------------------~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
||+|+++..+.+. ...+...+++.+.++|||||++++.
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 9999998665432 1134567999999999999999984
No 106
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.71 E-value=1.9e-17 Score=130.16 Aligned_cols=109 Identities=14% Similarity=0.222 Sum_probs=91.3
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
+.+.+.+ .+..+|||+|||+|.++..++.. ++++|+++|+|+.+++.+++++..+|...++++ .|....+++++|
T Consensus 41 ~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~ 116 (200)
T 3fzg_A 41 TYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTY 116 (200)
T ss_dssp HHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEE
T ss_pred HHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCc
Confidence 3444444 45789999999999999999887 788999999999999999999999988656666 565544566889
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
|+|++..++|++ ++.+..+.++.+.|+|||.++-
T Consensus 117 DvVLa~k~LHlL--~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 117 DVVFLLKMLPVL--KQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp EEEEEETCHHHH--HHTTCCHHHHHHTCEEEEEEEE
T ss_pred ChhhHhhHHHhh--hhhHHHHHHHHHHhCCCCEEEE
Confidence 999999999999 5556677799999999998863
No 107
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.71 E-value=5e-17 Score=128.19 Aligned_cols=121 Identities=12% Similarity=0.111 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-
Q 024096 19 QMRKVSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL- 96 (272)
Q Consensus 19 q~~~~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~- 96 (272)
.....+.+++.+. ..++.+|||+|||+|.++..+++.+..+++|+|+++.+++.+++++...++.++++++++|+.+.
T Consensus 15 ~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 15 SDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp ---CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 3344566777776 66788999999999999999998744699999999999999999999988877899999998874
Q ss_pred C-CCCCccEEEEechhhccChhhHHHHHHHHH--hcCccCcEEEEEeec
Q 024096 97 P-KANKYDRIISCGMIEHVGHDYMEEFFGCCE--SLLATHGLLVLQFIS 142 (272)
Q Consensus 97 ~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~ 142 (272)
+ .+++||+|++..+++. ......++.+. ++|+|||++++....
T Consensus 95 ~~~~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HHBCSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred HhhcCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 3 4467999999876542 33466777776 999999999997655
No 108
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.71 E-value=4.7e-17 Score=142.46 Aligned_cols=128 Identities=16% Similarity=0.189 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHH-------HHcCC-CCCe
Q 024096 16 EVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKV-------REAGL-QDHI 86 (272)
Q Consensus 16 ~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~-------~~~g~-~~~i 86 (272)
.+.....+..+++.+.+.++.+|||||||+|.++..++...++ +++|+|+++.+++.|+++. +..|+ ..++
T Consensus 155 GEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV 234 (438)
T 3uwp_A 155 GETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY 234 (438)
T ss_dssp GGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 3455666788999999999999999999999999999977454 6999999999999998754 34465 3589
Q ss_pred EEEEcccCCCC-CC--CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCC
Q 024096 87 RFYLCDYRQLP-KA--NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQ 146 (272)
Q Consensus 87 ~~~~~d~~~~~-~~--~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 146 (272)
+++++|+.+++ .+ ..||+|+++..+. . .+....+.++.+.|||||+|++.+...+..
T Consensus 235 efi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d 294 (438)
T 3uwp_A 235 TLERGDFLSEEWRERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLN 294 (438)
T ss_dssp EEEECCTTSHHHHHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTT
T ss_pred EEEECcccCCccccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCC
Confidence 99999999887 22 4799999987653 3 466788899999999999999987776654
No 109
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.71 E-value=4.4e-17 Score=133.53 Aligned_cols=107 Identities=16% Similarity=0.157 Sum_probs=89.2
Q ss_pred HHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----CCCC
Q 024096 28 EKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----KANK 101 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----~~~~ 101 (272)
+.+.++||++|||+|||+|.++..+++. +..+|+|+|+++.+++.+++++.+. .++..+.+|..... ..+.
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCC
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccce
Confidence 4577899999999999999999999997 5679999999999999998887654 47899999886643 4578
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
+|+|++.. .|. ++...+++++.+.|||||+++++..
T Consensus 148 vDvVf~d~--~~~--~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 148 VDGLYADV--AQP--EQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp EEEEEECC--CCT--THHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEEec--cCC--hhHHHHHHHHHHhccCCCEEEEEEe
Confidence 99998743 333 4567899999999999999998643
No 110
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.71 E-value=3.2e-16 Score=146.79 Aligned_cols=120 Identities=21% Similarity=0.276 Sum_probs=100.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHcc--CCEEEEEcCCHHHHHHHHHHHHHc------CCCCCeEEEEcc
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQT--GCKYTGITLSEEQLKYAEIKVREA------GLQDHIRFYLCD 92 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~------g~~~~i~~~~~d 92 (272)
..++.+++.+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++... ++ .+++++++|
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGD 786 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESC
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECc
Confidence 334555666655688999999999999999999873 279999999999999999877642 34 379999999
Q ss_pred cCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 93 YRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 93 ~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+.+++ .+++||+|++..+++|+++.....+++++.++|||| .++++++.
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99998 568999999999999998776778999999999999 77776554
No 111
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.70 E-value=1.2e-16 Score=127.11 Aligned_cols=115 Identities=20% Similarity=0.325 Sum_probs=98.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-CCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-LPKA 99 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~~~~ 99 (272)
.....+++.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++...++.+++.+.++|+.+ ++..
T Consensus 20 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 20 EVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 334567777788899999999999999999999874 89999999999999999999988886689999999876 2232
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++||+|++..+++++ ..+++++.++|+|||.+++...
T Consensus 99 ~~~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 99 PDIDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CCEEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEec
Confidence 689999998877654 7899999999999999998654
No 112
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=2e-17 Score=136.83 Aligned_cols=104 Identities=15% Similarity=0.109 Sum_probs=87.7
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CCCCccEEEE-
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KANKYDRIIS- 107 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~~~fD~V~~- 107 (272)
..+|.+|||||||+|..+..+++..+.+++++|+|+.+++.|+++....+ .++.++.+|+.+.. ++++||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D 135 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEe
Confidence 36788999999999999999988755789999999999999999987765 47899999987653 5678999975
Q ss_pred ----echhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 108 ----CGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 108 ----~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+ .+...+++++.|+|||||++++.
T Consensus 136 ~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 136 TYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeecccchhhh--cchhhhhhhhhheeCCCCEEEEE
Confidence 3455666 56789999999999999999874
No 113
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.70 E-value=1e-16 Score=129.89 Aligned_cols=108 Identities=19% Similarity=0.253 Sum_probs=92.6
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KAN 100 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~ 100 (272)
...+++.+.. ++.+|||+|||+|.++..+ +. +++|+|+|+.+++.++++. .++.++++|+.+++ +++
T Consensus 26 ~~~~l~~~~~-~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~ 94 (211)
T 2gs9_A 26 EERALKGLLP-PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGE 94 (211)
T ss_dssp HHHHHHTTCC-CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSS
T ss_pred HHHHHHHhcC-CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCC
Confidence 3445555543 7889999999999998877 45 9999999999999998875 37899999999988 667
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
+||+|++..+++|++ ++..+++++.++|||||++++.++..
T Consensus 95 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 95 SFDVVLLFTTLEFVE--DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CEEEEEEESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred cEEEEEEcChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999999999999994 56899999999999999999987653
No 114
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.70 E-value=2.7e-16 Score=127.92 Aligned_cols=106 Identities=22% Similarity=0.339 Sum_probs=90.1
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CCCCccEEEEe
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KANKYDRIISC 108 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~~~fD~V~~~ 108 (272)
.++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.|++++...++ +++.++++|+.+++ ++++||+|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 45789999999999999999988 678999999999999999999998887 58999999998865 35789999998
Q ss_pred chhhccChh------hHHHHHHHHHhcCccCcEEEEE
Q 024096 109 GMIEHVGHD------YMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 109 ~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+.... ....+++++.++|+|||.+++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 765432110 1257999999999999999985
No 115
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.70 E-value=1.2e-16 Score=132.30 Aligned_cols=101 Identities=16% Similarity=0.231 Sum_probs=88.5
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC----CCCccEEE
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----ANKYDRII 106 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----~~~fD~V~ 106 (272)
+.++.+|||+|||+|..+..++.. ++.+|+|+|+|+.+++.+++++...+++ +++++++|+.+++. +++||+|+
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEE
Confidence 357789999999999999999975 6789999999999999999999998885 69999999987762 57899999
Q ss_pred EechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+..+ .+...+++++.++|||||++++.
T Consensus 147 ~~~~------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 147 ARAV------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EECC------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred Eecc------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 9762 34589999999999999999885
No 116
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.70 E-value=1.4e-16 Score=130.53 Aligned_cols=121 Identities=18% Similarity=0.172 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEccc
Q 024096 17 VGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQ-DHIRFYLCDY 93 (272)
Q Consensus 17 ~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~-~~i~~~~~d~ 93 (272)
..+...+..++...+.+++.+|||+|||+|..+..+++. ++.+|+++|+++.+++.|+++++..|+. ++++++++|+
T Consensus 39 ~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda 118 (221)
T 3dr5_A 39 EMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRP 118 (221)
T ss_dssp HHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH
T ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCH
Confidence 344445566666666556679999999999999999986 3789999999999999999999999987 7899999998
Q ss_pred CCCC---CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 94 RQLP---KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 94 ~~~~---~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
.+.. .+++||+|++.... .+...+++++.++|||||++++.+..
T Consensus 119 ~~~l~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 119 LDVMSRLANDSYQLVFGQVSP-----MDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp HHHGGGSCTTCEEEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred HHHHHHhcCCCcCeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 7653 25799999987543 33477999999999999999985544
No 117
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.70 E-value=1.5e-16 Score=133.06 Aligned_cols=128 Identities=23% Similarity=0.246 Sum_probs=102.7
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechh
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMI 111 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~ 111 (272)
+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++..+++. +++.++|+.+..++++||+|+++...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPFGPFDLLVANLYA 194 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGGCCEEEEEEECCH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcCCCCCEEEECCcH
Confidence 467899999999999999998886 569999999999999999999988874 89999998763234689999997655
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEe
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLEN 191 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~ 191 (272)
+++ ..+++++.++|||||+++++.+... ..+++. .+.+++||.+.++..
T Consensus 195 ~~~-----~~~l~~~~~~LkpgG~lils~~~~~-------------------------~~~~v~-~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 195 ELH-----AALAPRYREALVPGGRALLTGILKD-------------------------RAPLVR-EAMAGAGFRPLEEAA 243 (254)
T ss_dssp HHH-----HHHHHHHHHHEEEEEEEEEEEEEGG-------------------------GHHHHH-HHHHHTTCEEEEEEE
T ss_pred HHH-----HHHHHHHHHHcCCCCEEEEEeeccC-------------------------CHHHHH-HHHHHCCCEEEEEec
Confidence 543 7899999999999999999755411 233444 344568999988766
Q ss_pred cC
Q 024096 192 IG 193 (272)
Q Consensus 192 ~~ 193 (272)
.+
T Consensus 244 ~~ 245 (254)
T 2nxc_A 244 EG 245 (254)
T ss_dssp ET
T ss_pred cC
Confidence 54
No 118
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.69 E-value=1.2e-16 Score=139.77 Aligned_cols=153 Identities=10% Similarity=0.092 Sum_probs=112.7
Q ss_pred HHHc--CCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 27 IEKA--RVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 27 ~~~l--~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
++.+ .+.++.+|||||||+|..+..+++. ++.+++++|+ +.+++.+++. .+++++.+|+.+ +.+ .||
T Consensus 179 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p-~~D 248 (352)
T 1fp2_A 179 LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFT-SIP-NAD 248 (352)
T ss_dssp HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTT-CCC-CCS
T ss_pred HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccC-CCC-Ccc
Confidence 4445 4567789999999999999999988 7889999999 9998877642 369999999876 422 399
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCcc---CcEEEEEeecCCCCccc----cccCcchhhhhcccCCCCCCCHHHHHH
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLAT---HGLLVLQFISAPDQCYD----EYRLSPGFIKEYIFPGGCLPSLGRVTS 176 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~ 176 (272)
+|++..++||+++++...++++++++||| ||++++.+...+..... ........ ...... +...+.+++.+
T Consensus 249 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~-~~~~~~-g~~~t~~e~~~ 326 (352)
T 1fp2_A 249 AVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDV-NMACLN-GKERNEEEWKK 326 (352)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHH-HGGGGT-CCCEEHHHHHH
T ss_pred EEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccH-HHHhcc-CCCCCHHHHHH
Confidence 99999999999877666999999999999 99999988876543211 00000011 011122 44557778864
Q ss_pred HhhcCCCcEEEEEEec
Q 024096 177 AMTSSSGLCVEHLENI 192 (272)
Q Consensus 177 ~l~~~~Gf~v~~~~~~ 192 (272)
+++++||.+.++...
T Consensus 327 -ll~~aGf~~~~~~~~ 341 (352)
T 1fp2_A 327 -LFIEAGFQHYKISPL 341 (352)
T ss_dssp -HHHHTTCCEEEEEEE
T ss_pred -HHHHCCCCeeEEEec
Confidence 555799998877653
No 119
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=4.2e-17 Score=134.74 Aligned_cols=117 Identities=15% Similarity=0.109 Sum_probs=91.8
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC--C-CC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL--P-KA 99 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~--~-~~ 99 (272)
+..+.+.+ ..++.+|||+|||+|.++..+++....+++|+|+|+.+++.|+++....+ .++.++++|+.++ + ++
T Consensus 50 ~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~ 126 (236)
T 1zx0_A 50 MHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPD 126 (236)
T ss_dssp HHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCT
T ss_pred HHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCC
Confidence 33444433 46788999999999999999987544599999999999999999887665 4799999999887 5 56
Q ss_pred CCccEEEE-echh--hccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 100 NKYDRIIS-CGMI--EHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 100 ~~fD~V~~-~~~~--~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++||+|++ ...+ +.....+...+++++.++|||||++++.+..
T Consensus 127 ~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 127 GHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred CceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 89999999 4442 2222244567899999999999999985543
No 120
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.69 E-value=8.6e-17 Score=132.64 Aligned_cols=109 Identities=18% Similarity=0.284 Sum_probs=93.3
Q ss_pred HcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC---CCCccE
Q 024096 29 KARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK---ANKYDR 104 (272)
Q Consensus 29 ~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~---~~~fD~ 104 (272)
.+...++.+|||+|||+|..+..+++. ++.+|+++|+++.+++.|+++++..++.++++++++|+.+..+ +++||+
T Consensus 66 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 66 LIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDM 145 (232)
T ss_dssp HHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEE
T ss_pred HHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccE
Confidence 333457789999999999999999986 5789999999999999999999999987799999999987643 579999
Q ss_pred EEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 105 IISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 105 V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|++.... .....+++++.++|||||++++.+..
T Consensus 146 V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 146 IFIDAAK-----AQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp EEEETTS-----SSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred EEEcCcH-----HHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 9987543 34578999999999999999986554
No 121
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.69 E-value=4.2e-16 Score=128.78 Aligned_cols=113 Identities=28% Similarity=0.474 Sum_probs=96.4
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
.+.+.+.+ .++.+|||+|||+|.++..+++. .+++|+|+|+.+++.++++....+ .++++.++|+.+.+.+++|
T Consensus 24 ~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~f 97 (243)
T 3d2l_A 24 VAWVLEQV--EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELPEPV 97 (243)
T ss_dssp HHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCSSCE
T ss_pred HHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCCCCc
Confidence 34455554 35689999999999999999886 799999999999999999988766 4799999999988755899
Q ss_pred cEEEEec-hhhcc-ChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 103 DRIISCG-MIEHV-GHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 103 D~V~~~~-~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
|+|++.. +++|+ +.++...+++++.++|||||++++...
T Consensus 98 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 98 DAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 9999986 99998 445678999999999999999998543
No 122
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.69 E-value=2.8e-16 Score=132.93 Aligned_cols=117 Identities=15% Similarity=0.290 Sum_probs=96.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 99 (272)
..++.+++.+. .++.+|||+|||+|.++..+++. ++.+++++|+|+.+++.+++++...+++ +++++++|+.+..++
T Consensus 97 ~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~~ 174 (276)
T 2b3t_A 97 CLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAG 174 (276)
T ss_dssp HHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGTT
T ss_pred HHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhccc
Confidence 34566777766 67789999999999999999976 6789999999999999999999988875 799999998775445
Q ss_pred CCccEEEEech-------------hhccCh----------hhHHHHHHHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGM-------------IEHVGH----------DYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~-------------~~~~~~----------~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
++||+|+++.. ++|.|. +....+++++.++|+|||++++.
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 78999999843 333321 34578999999999999999985
No 123
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.69 E-value=2.1e-16 Score=143.30 Aligned_cols=181 Identities=21% Similarity=0.185 Sum_probs=131.3
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
.+.+++.+...++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|++++..+++.++++++++|+.+++.+++|
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~f 225 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 225 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCe
Confidence 355667776678899999999999999999987567999999998 9999999999999988999999999987745789
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC---C--CC-ccccccCcchhhhhcccCCCCCCCHHHHHH
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA---P--DQ-CYDEYRLSPGFIKEYIFPGGCLPSLGRVTS 176 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~---~--~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 176 (272)
|+|++..+++|+..++....+.++.++|||||++++..... + .. .+.+......++....+++..++.+.+...
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~~~~ 305 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAV 305 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHHHHH
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHHhhccCccccccCCCcChhhhhhHHH
Confidence 99999988888876777788889999999999998633221 0 00 000000012233334678888887766542
Q ss_pred HhhcCCCcEEEEEEecCccHHHHHHHHHHH
Q 024096 177 AMTSSSGLCVEHLENIGIHYYQTLRCWRKN 206 (272)
Q Consensus 177 ~l~~~~Gf~v~~~~~~~~~~~~~~~~~~~~ 206 (272)
. +..+..++...+++.+|..++..|.+.
T Consensus 306 ~--~~f~~pvvd~~~~~~~y~~tl~~~~d~ 333 (480)
T 3b3j_A 306 D--EYFRQPVVDTFDIRILMAKSVKYTVNF 333 (480)
T ss_dssp H--HHTTSCEECCCCSTTBCSCCEEEEEET
T ss_pred H--hccCCcEEEEeecccccchhhhhhhhh
Confidence 2 112225666667777776665555443
No 124
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.68 E-value=3.2e-16 Score=137.97 Aligned_cols=117 Identities=13% Similarity=0.235 Sum_probs=98.0
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCC--CeEEEEcccCCCCCCC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQD--HIRFYLCDYRQLPKAN 100 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~--~i~~~~~d~~~~~~~~ 100 (272)
+.+++.+...++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.+++++..+++.+ +++++.+|+.+..+++
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~ 291 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 291 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTT
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCC
Confidence 44677777777899999999999999999998 68899999999999999999999988653 5888999998855667
Q ss_pred CccEEEEechhhc---cChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 101 KYDRIISCGMIEH---VGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 101 ~fD~V~~~~~~~~---~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+||+|+++..+++ +.+.....+++++.++|||||++++..
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9999999998875 333344578999999999999999954
No 125
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.68 E-value=2e-16 Score=125.51 Aligned_cols=119 Identities=16% Similarity=0.097 Sum_probs=96.1
Q ss_pred HHHHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--
Q 024096 21 RKVSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-- 97 (272)
Q Consensus 21 ~~~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-- 97 (272)
...+.+++.+. ..++.+|||+|||+|.++..+++....+|+|+|+++.+++.+++++..+++.++++++++|+.+..
T Consensus 30 ~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 109 (187)
T 2fhp_A 30 KVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQ 109 (187)
T ss_dssp HHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHH
Confidence 34455666663 457889999999999999998886557999999999999999999999887678999999987743
Q ss_pred ---CCCCccEEEEechhhccChhhHHHHHHHH--HhcCccCcEEEEEeec
Q 024096 98 ---KANKYDRIISCGMIEHVGHDYMEEFFGCC--ESLLATHGLLVLQFIS 142 (272)
Q Consensus 98 ---~~~~fD~V~~~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~i~~~~ 142 (272)
.+++||+|++..+++.. .....++.+ .++|+|||.+++....
T Consensus 110 ~~~~~~~fD~i~~~~~~~~~---~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 110 FYEEKLQFDLVLLDPPYAKQ---EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp HHHTTCCEEEEEECCCGGGC---CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred HHhcCCCCCEEEECCCCCch---hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 25789999998875432 335666666 8899999999986554
No 126
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.68 E-value=2.1e-16 Score=139.41 Aligned_cols=117 Identities=19% Similarity=0.218 Sum_probs=98.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
+.+.+.+...++.+|||+|||+|.++..+++....+|+|+|+| .+++.++++++.+++.++++++++|+.+++.+++||
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 131 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVD 131 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEE
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcce
Confidence 4445555677899999999999999999999733499999999 999999999999999888999999999988558999
Q ss_pred EEEEechhhccCh-hhHHHHHHHHHhcCccCcEEEEEee
Q 024096 104 RIISCGMIEHVGH-DYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 104 ~V~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
+|++..+.+++.. ..+..+++.+.++|||||.++++..
T Consensus 132 ~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 132 VIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 9999765555533 3467899999999999999987433
No 127
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.68 E-value=8.9e-16 Score=121.07 Aligned_cols=112 Identities=16% Similarity=0.243 Sum_probs=95.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 99 (272)
......+++.+...++.+|||+|||+|.++..+++ .+.+++|+|+++.+++.+++++...++ ++++++++|+.+..++
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~ 98 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVLDK 98 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccccccC
Confidence 33446677777888899999999999999999998 688999999999999999999999887 4799999998873245
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++||+|++..+ .+...+++++.++ |||.+++...
T Consensus 99 ~~~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 99 LEFNKAFIGGT------KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp CCCSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred CCCcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEec
Confidence 78999999887 2347899999988 9999998654
No 128
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.68 E-value=1.2e-16 Score=128.98 Aligned_cols=116 Identities=13% Similarity=0.105 Sum_probs=93.2
Q ss_pred HHHHHHcCC-CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEcccCCCC---C
Q 024096 24 SVLIEKARV-SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQ-DHIRFYLCDYRQLP---K 98 (272)
Q Consensus 24 ~~l~~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~~---~ 98 (272)
+.+++.+.. .++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++..+++. ++++++++|+.+.. .
T Consensus 42 ~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 121 (201)
T 2ift_A 42 ETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQ 121 (201)
T ss_dssp HHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCC
T ss_pred HHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhc
Confidence 344444432 267899999999999999877764469999999999999999999998874 58999999987754 2
Q ss_pred CCC-ccEEEEechhhccChhhHHHHHHHH--HhcCccCcEEEEEeec
Q 024096 99 ANK-YDRIISCGMIEHVGHDYMEEFFGCC--ESLLATHGLLVLQFIS 142 (272)
Q Consensus 99 ~~~-fD~V~~~~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~i~~~~ 142 (272)
+++ ||+|++...++ . .+...+++.+ .++|+|||.++++...
T Consensus 122 ~~~~fD~I~~~~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH-F--NLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp SSCCEEEEEECCCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred cCCCCCEEEECCCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 468 99999988744 3 4567888888 6789999999987655
No 129
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.68 E-value=4.4e-16 Score=135.55 Aligned_cols=112 Identities=26% Similarity=0.301 Sum_probs=95.2
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~f 102 (272)
+.+.+.+...++.+|||+|||+|.++..+++....+|+|+|+|+ +++.|+++++.+++.++++++++|+.+++ ++++|
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 44555566778899999999999999999987445999999997 99999999999998779999999999987 55899
Q ss_pred cEEEEech---hhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 103 DRIISCGM---IEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 103 D~V~~~~~---~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
|+|++..+ +.+. ..+..+++++.++|||||+++.
T Consensus 133 D~Ivs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 133 DVIISEWMGYFLLFE--SMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EEEEECCCBTTBTTT--CHHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEEcCchhhccCH--HHHHHHHHHHHhhcCCCcEEEc
Confidence 99999773 4443 4567899999999999999983
No 130
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.68 E-value=1.4e-16 Score=130.40 Aligned_cols=107 Identities=17% Similarity=0.221 Sum_probs=90.7
Q ss_pred CCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C-CC-----CCcc
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P-KA-----NKYD 103 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~-~~-----~~fD 103 (272)
.++.+|||+|||+|..+..+++. ++.+|+++|+++.+++.|+++++..++.++++++++|+.+. + .. ++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 46789999999999999999986 37899999999999999999999999877899999998553 2 12 6899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+|++....++. .....+++.+ ++|||||++++.+..
T Consensus 137 ~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 137 MVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 99998877766 3445677777 999999999986655
No 131
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.68 E-value=3e-16 Score=127.16 Aligned_cols=107 Identities=15% Similarity=0.241 Sum_probs=92.5
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechh
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMI 111 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~ 111 (272)
.++.+|||+|||+|.++..+++....+++|+|+|+.+++.++++.... .++.+.++|+.+++ ++++||+|++..++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~~i~~~~~d~~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV---PQLRWETMDVRKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC---TTCEEEECCTTSCCSCSSCEEEEEEESHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC---CCcEEEEcchhcCCCCCCcccEEEECcch
Confidence 678899999999999999999872238999999999999999887532 47999999999887 56799999999999
Q ss_pred hccC-------------hhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 112 EHVG-------------HDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 112 ~~~~-------------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+++. .++...+++++.++|||||++++.++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 8775 346689999999999999999997665
No 132
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.67 E-value=2.3e-16 Score=137.88 Aligned_cols=107 Identities=25% Similarity=0.261 Sum_probs=92.3
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEec
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCG 109 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~ 109 (272)
.+.++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|+++++.+++.++++++++|+.+++ ++++||+|++..
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 4467899999999999999999998445999999995 99999999999999888999999999988 568999999977
Q ss_pred hhhccC-hhhHHHHHHHHHhcCccCcEEEE
Q 024096 110 MIEHVG-HDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 110 ~~~~~~-~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
+.+++. ...+..+++.+.++|||||+++.
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 544442 24568899999999999999975
No 133
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.67 E-value=6.3e-16 Score=124.86 Aligned_cols=99 Identities=17% Similarity=0.332 Sum_probs=87.6
Q ss_pred CCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
++.+|||+|||+|..+..+++. ++.+++++|+|+.+++.+++++...+++ ++++.++|+.+.++.++||+|++...
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPSEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCCCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCccCCcCEEEEecc--
Confidence 4789999999999999999987 6789999999999999999999988875 49999999998876678999997542
Q ss_pred ccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 113 HVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.+...+++++.++|+|||++++.
T Consensus 142 ----~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 ----ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ----SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ----CCHHHHHHHHHHhcCCCcEEEEE
Confidence 23479999999999999999985
No 134
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.67 E-value=5.2e-16 Score=131.45 Aligned_cols=105 Identities=20% Similarity=0.257 Sum_probs=91.3
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechh
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMI 111 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~ 111 (272)
.+++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++++.+++.++++++++|+.+.+.+++||+|++....
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch
Confidence 35789999999999999999998733379999999999999999999999987799999999998877899999996442
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
. ...+++++.++|||||++++.+..
T Consensus 203 ~------~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 203 R------THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp S------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred h------HHHHHHHHHHHCCCCeEEEEEEee
Confidence 2 257888999999999999997665
No 135
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.67 E-value=1.7e-15 Score=123.45 Aligned_cols=105 Identities=25% Similarity=0.288 Sum_probs=89.5
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-CCCCCCccEEEEec
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-LPKANKYDRIISCG 109 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~~~~~~fD~V~~~~ 109 (272)
++++.+|||||||+|.++..+++. +..+|+++|+++.+++.|+++++.+|+.++++++.+|..+ +++.++||+|++.+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 347889999999999999999997 4568999999999999999999999998889999999854 44334799999865
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+ +.+-...++..+...|+|+|+++++.
T Consensus 93 ~----Gg~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 93 M----GGRLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp E----CHHHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred C----ChHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 4 33445789999999999999999853
No 136
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.67 E-value=1.2e-15 Score=124.57 Aligned_cols=105 Identities=24% Similarity=0.234 Sum_probs=90.6
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC-CCccEEEEec
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA-NKYDRIISCG 109 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~-~~fD~V~~~~ 109 (272)
++++.+|||||||+|.++..+++. +..+|+++|+++.+++.|+++++.+|+.+++++.++|..+...+ ++||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 357889999999999999999997 45689999999999999999999999988999999998876633 4799998765
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+.- +-...++....+.|+++|+++++.
T Consensus 99 mGg----~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 99 MGG----RLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp ECH----HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred Cch----HHHHHHHHHHHHHhCcCCEEEEEC
Confidence 433 445789999999999999999864
No 137
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.67 E-value=4.6e-16 Score=126.64 Aligned_cols=107 Identities=17% Similarity=0.241 Sum_probs=89.2
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CCCCccEEEEe
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KANKYDRIISC 108 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~~~fD~V~~~ 108 (272)
.++.+|||||||+|.++..+++. ++.+++|+|+|+.+++.|++++...++ .+++++++|+.+++ ++++||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 36789999999999999999988 788999999999999999999998887 47999999998864 45789999987
Q ss_pred chhhccChh------hHHHHHHHHHhcCccCcEEEEEe
Q 024096 109 GMIEHVGHD------YMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 109 ~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
....+.... ....+++++.++|||||.+++.+
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 554332110 12679999999999999999853
No 138
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.66 E-value=6e-16 Score=137.75 Aligned_cols=122 Identities=11% Similarity=0.128 Sum_probs=98.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHH-------HHHHHHcCCC-CCeEEEE
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYA-------EIKVREAGLQ-DHIRFYL 90 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a-------~~~~~~~g~~-~~i~~~~ 90 (272)
...+..+++.+.+.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.| ++++...|+. .++++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 345567888888999999999999999999999987 446899999999999998 8888888853 6899999
Q ss_pred cccCCCC-----CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCC
Q 024096 91 CDYRQLP-----KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAP 144 (272)
Q Consensus 91 ~d~~~~~-----~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 144 (272)
+|....+ ..++||+|+++..+ +. .+....++++.+.|||||++++.+...+
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred cCccccccccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 8644321 24689999987666 33 4667889999999999999998754444
No 139
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.66 E-value=3.9e-16 Score=130.08 Aligned_cols=100 Identities=16% Similarity=0.194 Sum_probs=88.3
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC----CCCccEEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----ANKYDRIIS 107 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----~~~fD~V~~ 107 (272)
.++.+|||||||+|..+..++.. ++.+|+++|+|+.+++.+++++...++. +++++++|+++++. .++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEE
Confidence 56889999999999999999987 7889999999999999999999999985 59999999988763 378999999
Q ss_pred echhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 108 CGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+ .+...+++.+.++|||||++++.
T Consensus 158 ~a~------~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 158 RAV------APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp ESS------CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCc------CCHHHHHHHHHHHcCCCeEEEEE
Confidence 643 23478999999999999999874
No 140
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.66 E-value=9.5e-16 Score=128.05 Aligned_cols=166 Identities=11% Similarity=0.037 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHcCC-CCCCEEEEECCCc--hHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEE
Q 024096 16 EVGQMRKVSVLIEKARV-SKGQEVLDIGCGW--GTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYL 90 (272)
Q Consensus 16 ~~aq~~~~~~l~~~l~~-~~~~~vLDiG~G~--G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~ 90 (272)
..+.+..+..+++.+.. ....+|||||||+ +.++..++++ ++++|+++|.|+.+++.+++++...+ ..++++++
T Consensus 59 a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~ 137 (277)
T 3giw_A 59 MRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVE 137 (277)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEE
T ss_pred HHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEE
Confidence 45556666777777753 3447999999997 4455555554 78999999999999999999886542 24799999
Q ss_pred cccCCCC-----C--CCCcc-----EEEEechhhccChhh-HHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchh
Q 024096 91 CDYRQLP-----K--ANKYD-----RIISCGMIEHVGHDY-MEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGF 157 (272)
Q Consensus 91 ~d~~~~~-----~--~~~fD-----~V~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 157 (272)
+|+.+.+ + .+.|| .|+++.++||+++.+ +..+++++.+.|+|||+|++++.+..... .........
T Consensus 138 aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p-~~~~~~~~~ 216 (277)
T 3giw_A 138 ADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP-QEVGRVARE 216 (277)
T ss_dssp CCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH-HHHHHHHHH
T ss_pred ecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH-HHHHHHHHH
Confidence 9998852 1 24455 688999999998765 67899999999999999999887754221 111111111
Q ss_pred hhhcccCCCCCCCHHHHHHHhhcCCCcEEE
Q 024096 158 IKEYIFPGGCLPSLGRVTSAMTSSSGLCVE 187 (272)
Q Consensus 158 ~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~ 187 (272)
.+..-.| ..+.+.+++.+. . .||+++
T Consensus 217 ~~~~g~p-~~~rs~~ei~~~-f--~Glelv 242 (277)
T 3giw_A 217 YAARNMP-MRLRTHAEAEEF-F--EGLELV 242 (277)
T ss_dssp HHHTTCC-CCCCCHHHHHHT-T--TTSEEC
T ss_pred HHhcCCC-CccCCHHHHHHH-h--CCCccc
Confidence 1111112 245677788754 4 399864
No 141
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.66 E-value=8.5e-16 Score=128.69 Aligned_cols=111 Identities=19% Similarity=0.274 Sum_probs=91.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCC
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KAN 100 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~ 100 (272)
.+..++..+- .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. .+ +.++|+.+++ +++
T Consensus 43 ~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~ 113 (260)
T 2avn_A 43 LIGSFLEEYL-KNPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSG 113 (260)
T ss_dssp HHHHHHHHHC-CSCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTT
T ss_pred HHHHHHHHhc-CCCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCC
Confidence 3444444432 27789999999999999999986 7899999999999999988742 12 8899999888 568
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+||+|++..++.|+.. ++..+++++.++|||||++++..+.
T Consensus 114 ~fD~v~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 114 AFEAVLALGDVLSYVE-NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CEEEEEECSSHHHHCS-CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CEEEEEEcchhhhccc-cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9999999987777743 3789999999999999999997665
No 142
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.66 E-value=9.1e-16 Score=135.26 Aligned_cols=122 Identities=18% Similarity=0.295 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHcC--CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccC
Q 024096 17 VGQMRKVSVLIEKAR--VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYR 94 (272)
Q Consensus 17 ~aq~~~~~~l~~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 94 (272)
......++.+.+.+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++..+++ +++++++|+.
T Consensus 214 ~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~ 290 (381)
T 3dmg_A 214 PASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVD 290 (381)
T ss_dssp HHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTT
T ss_pred HHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchh
Confidence 344445556655543 346789999999999999999997 78999999999999999999998886 4899999999
Q ss_pred CCC-CCCCccEEEEechhhc---cChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 95 QLP-KANKYDRIISCGMIEH---VGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 95 ~~~-~~~~fD~V~~~~~~~~---~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
+.+ ++++||+|+++.++++ ...+....+++++.++|||||.+++...
T Consensus 291 ~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 291 EALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp TTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 887 4489999999999887 3336778999999999999999998643
No 143
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.66 E-value=2.9e-16 Score=137.65 Aligned_cols=156 Identities=12% Similarity=0.111 Sum_probs=115.4
Q ss_pred HHHHHc--CCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCC
Q 024096 25 VLIEKA--RVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANK 101 (272)
Q Consensus 25 ~l~~~l--~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 101 (272)
.+++.+ .+.++.+|||||||+|.++..++++ ++.+++++|+ +.+++.+++ . .+++++.+|+.+ +.+ .
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~-~ 251 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIP-S 251 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCC-C
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCC-C
Confidence 455665 4456789999999999999999998 7789999999 788876654 2 369999999987 522 4
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCcc---CcEEEEEeecCCCCccc----cccCcchhhhhcccCCCCCCCHHHH
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLAT---HGLLVLQFISAPDQCYD----EYRLSPGFIKEYIFPGGCLPSLGRV 174 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~ 174 (272)
||+|++..++||+++++...++++++++|+| ||++++.+...+..... .......+ ......++...+.+++
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~-~~~~~~~g~~~t~~e~ 330 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDL-VMLTMFLGKERTKQEW 330 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHH-HHHHHHSCCCEEHHHH
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCH-HHhccCCCCCCCHHHH
Confidence 9999999999999877667999999999999 99999988776543211 01001111 0111234556688888
Q ss_pred HHHhhcCCCcEEEEEEec
Q 024096 175 TSAMTSSSGLCVEHLENI 192 (272)
Q Consensus 175 ~~~l~~~~Gf~v~~~~~~ 192 (272)
.+ +++++||.+.++...
T Consensus 331 ~~-ll~~aGf~~~~~~~~ 347 (358)
T 1zg3_A 331 EK-LIYDAGFSSYKITPI 347 (358)
T ss_dssp HH-HHHHTTCCEEEEEEE
T ss_pred HH-HHHHcCCCeeEEEec
Confidence 74 555699998887664
No 144
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.65 E-value=9e-16 Score=129.71 Aligned_cols=110 Identities=18% Similarity=0.253 Sum_probs=90.6
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCCeEEEEcccCCCCCCC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREA-GLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~-g~~~~i~~~~~d~~~~~~~~ 100 (272)
..+++.+.+.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.+++++... |. +++++.++|+.+..+++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~ 178 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFISDQ 178 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCCSC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCcCC
Confidence 46777788889999999999999999999986 4789999999999999999999887 74 48999999998844567
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
+||+|++ +++ +...+++++.++|||||++++.+.
T Consensus 179 ~fD~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 179 MYDAVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CEEEEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CccEEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 8999998 443 336899999999999999998653
No 145
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.65 E-value=1.3e-15 Score=125.24 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=89.1
Q ss_pred HHH---HHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC----
Q 024096 24 SVL---IEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ---- 95 (272)
Q Consensus 24 ~~l---~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~---- 95 (272)
..+ ++.+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++++.. +++.++.+|+.+
T Consensus 61 ~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~ 137 (230)
T 1fbn_A 61 AAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEY 137 (230)
T ss_dssp HHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGG
T ss_pred HHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccc
Confidence 455 55566778999999999999999999988 4479999999999999999887654 589999999987
Q ss_pred CCCCCCccEEEEechhhccChh-hHHHHHHHHHhcCccCcEEEEE
Q 024096 96 LPKANKYDRIISCGMIEHVGHD-YMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 96 ~~~~~~fD~V~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.+..++||+|+. ++++. ....+++++.++|||||++++.
T Consensus 138 ~~~~~~~D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 138 ANIVEKVDVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TTTSCCEEEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCccEEEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 653478999993 33322 2367799999999999999996
No 146
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.65 E-value=9.5e-16 Score=125.98 Aligned_cols=111 Identities=21% Similarity=0.261 Sum_probs=95.7
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K 98 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~ 98 (272)
...+..+++.+...++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++....+ ++.++++|+.+.. .
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~ 131 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEE 131 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccccccc
Confidence 345677888888889999999999999999999987 5899999999999999999987654 7999999998733 4
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+++||+|++..+++|+++ ++.++|+|||++++....
T Consensus 132 ~~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GCCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEcC
Confidence 578999999999999852 578899999999997554
No 147
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.65 E-value=1.7e-15 Score=124.84 Aligned_cols=108 Identities=15% Similarity=0.111 Sum_probs=88.4
Q ss_pred HHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC---C-CCC
Q 024096 27 IEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL---P-KAN 100 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~---~-~~~ 100 (272)
++.+.+.++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.+.++++.+ .+++++++|+.+. + .++
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCC
Confidence 34566788999999999999999999987 3579999999999988888888775 4899999999873 3 457
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
+||+|++... ..+....+++++.++|||||+++++..
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 8999999654 223345678899999999999999533
No 148
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.65 E-value=8.1e-16 Score=128.09 Aligned_cols=107 Identities=11% Similarity=0.129 Sum_probs=91.5
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C---CCCCccEE
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P---KANKYDRI 105 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~---~~~~fD~V 105 (272)
..++.+|||+|||+|..+..+++. + +.+|+++|+++.+++.|++++...++.++++++++|+.+. + ..++||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 346789999999999999999987 4 7899999999999999999999999988999999998763 2 23589999
Q ss_pred EEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 106 ISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
++... ......+++++.++|||||++++.+...
T Consensus 141 ~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 141 FIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp EECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 98653 2445789999999999999999876653
No 149
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.65 E-value=1.8e-15 Score=122.87 Aligned_cols=104 Identities=19% Similarity=0.166 Sum_probs=83.4
Q ss_pred cCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC----CCCCCccE
Q 024096 30 ARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL----PKANKYDR 104 (272)
Q Consensus 30 l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~----~~~~~fD~ 104 (272)
+.+.++.+|||+|||+|..+..+++. ++.+|+|+|+|+.+++.+.+..+.. .++.++.+|+... +..++||+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeE
Confidence 56778999999999999999999987 4479999999999887777666553 3789999998774 33478999
Q ss_pred EEEechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 105 IISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 105 V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
|++.. ..+ .....+++++.++|||||++++..
T Consensus 130 V~~~~-~~~---~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 130 IYQDI-AQK---NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEECC-CST---THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEec-cCh---hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99972 221 334566999999999999999963
No 150
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.65 E-value=3.5e-16 Score=127.95 Aligned_cols=107 Identities=15% Similarity=0.163 Sum_probs=91.1
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----C-CCCcc
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----K-ANKYD 103 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~-~~~fD 103 (272)
..++.+|||+|||+|..+..+++. + +.+++++|+++.+++.+++++...++.++++++++|+.+.. . .++||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 346789999999999999999997 4 78999999999999999999999998878999999986642 1 26799
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
+|++.... .....+++++.++|+|||++++.+...
T Consensus 136 ~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 136 FIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp EEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred EEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 99987653 344789999999999999999866553
No 151
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.65 E-value=1.5e-15 Score=126.64 Aligned_cols=112 Identities=19% Similarity=0.247 Sum_probs=97.2
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 100 (272)
...+++.+.+.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.|+++++..++++++++.++|+.+..+++
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 356778888899999999999999999999987 378999999999999999999999998777999999998765667
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
+||+|++. .+ +...+++++.++|+|||++++...
T Consensus 162 ~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 162 NVDHVILD-----LP--QPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp SEEEEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CcCEEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEEC
Confidence 89999983 32 336789999999999999998543
No 152
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.65 E-value=5.2e-16 Score=127.85 Aligned_cols=111 Identities=19% Similarity=0.292 Sum_probs=94.7
Q ss_pred HHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C-C--CCC
Q 024096 27 IEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P-K--ANK 101 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~-~--~~~ 101 (272)
...+...++.+|||+|||+|..+..+++. ++.+|+++|+++.+++.|++++...++.+++.++++|+.+. + . +++
T Consensus 47 ~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 126 (233)
T 2gpy_A 47 LHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPL 126 (233)
T ss_dssp HHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCC
T ss_pred HHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCC
Confidence 33344557889999999999999999988 57899999999999999999999998877899999999875 3 2 578
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
||+|++....+ +...+++++.++|+|||++++.++.
T Consensus 127 fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 127 FDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp EEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred ccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 99999977644 3478999999999999999997554
No 153
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.64 E-value=1.9e-15 Score=122.74 Aligned_cols=114 Identities=22% Similarity=0.211 Sum_probs=96.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccC--CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTG--CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP 97 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~ 97 (272)
......+++.+...++.+|||+|||+|.++..+++..+ .+++++|+++.+++.++++....+++ ++.+.++|+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCC
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCC
Confidence 34456778888888999999999999999999998733 79999999999999999999888774 6999999986543
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
..++||+|++..+++|++ +++.++|||||++++....
T Consensus 142 ~~~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 142 EPLAPYDRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GGGCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEESS
T ss_pred CCCCCeeEEEECCchHHHH--------HHHHHHcCCCcEEEEEECC
Confidence 357899999999999985 3688999999999997544
No 154
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.64 E-value=1e-15 Score=120.18 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=93.0
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.+++. .++++++++|+.+..++++||+|+++..++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 45679999999999999999987 5 99999999999987 247899999998844558999999998888
Q ss_pred ccChh-------hHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcE
Q 024096 113 HVGHD-------YMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLC 185 (272)
Q Consensus 113 ~~~~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~ 185 (272)
+.++. +...+++++.+.| |||++++..... ....++. .+++++||.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-------------------------~~~~~l~-~~l~~~gf~ 142 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-------------------------NRPKEVL-ARLEERGYG 142 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-------------------------GCHHHHH-HHHHHTTCE
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-------------------------CCHHHHH-HHHHHCCCc
Confidence 65332 3457888888888 999999865431 1333444 344568998
Q ss_pred EEEEEe
Q 024096 186 VEHLEN 191 (272)
Q Consensus 186 v~~~~~ 191 (272)
+..+..
T Consensus 143 ~~~~~~ 148 (170)
T 3q87_B 143 TRILKV 148 (170)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 876655
No 155
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.64 E-value=7e-16 Score=124.52 Aligned_cols=117 Identities=15% Similarity=0.086 Sum_probs=92.3
Q ss_pred HHHHHHHHcCCC-CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C-C
Q 024096 22 KVSVLIEKARVS-KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P-K 98 (272)
Q Consensus 22 ~~~~l~~~l~~~-~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~-~ 98 (272)
..+.+++.+... ++.+|||+|||+|.++..++++...+|+++|+|+.+++.+++++..+++ ++++++++|+.+. + .
T Consensus 41 ~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~ 119 (202)
T 2fpo_A 41 VRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK 119 (202)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc
Confidence 334444444332 6789999999999999988876335999999999999999999999887 5899999998773 4 4
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHh--cCccCcEEEEEeec
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCES--LLATHGLLVLQFIS 142 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~--~LkpgG~l~i~~~~ 142 (272)
.++||+|++...++ . .....+++.+.+ +|+|||+++++...
T Consensus 120 ~~~fD~V~~~~p~~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 120 GTPHNIVFVDPPFR-R--GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCCEEEEEECCSSS-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCCCEEEECCCCC-C--CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 57899999987744 3 345677888865 59999999987654
No 156
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.64 E-value=1.7e-16 Score=132.51 Aligned_cols=117 Identities=20% Similarity=0.170 Sum_probs=86.5
Q ss_pred HHHHHHHcCC--CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC---
Q 024096 23 VSVLIEKARV--SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL--- 96 (272)
Q Consensus 23 ~~~l~~~l~~--~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~--- 96 (272)
+..+++.+.. .++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++..+++.++++++++|+.+.
T Consensus 52 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 131 (254)
T 2h00_A 52 VEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMD 131 (254)
T ss_dssp HHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTT
T ss_pred HHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhh
Confidence 3444444332 25789999999999999999887 67899999999999999999999999877799999997652
Q ss_pred C-C---CCCccEEEEechhhccCh-------------hhHHHHHHHHHhcCccCcEEEEE
Q 024096 97 P-K---ANKYDRIISCGMIEHVGH-------------DYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 97 ~-~---~~~fD~V~~~~~~~~~~~-------------~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+ + +++||+|+++..+++... +....++.++.++|||||.+.+.
T Consensus 132 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 132 ALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp TSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred hhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 2 2 258999999977665430 11235678899999999998764
No 157
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.64 E-value=2.7e-15 Score=125.17 Aligned_cols=110 Identities=19% Similarity=0.218 Sum_probs=94.9
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCCeEEEEcccCCCC-CC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREA-GLQDHIRFYLCDYRQLP-KA 99 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~-g~~~~i~~~~~d~~~~~-~~ 99 (272)
..+++.+.+.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.++++++.. | .+++.+.++|+.+.+ ++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCC
Confidence 46778888899999999999999999999987 3689999999999999999999887 7 458999999999885 55
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++||+|++. .+ +...+++++.++|+|||++++...
T Consensus 165 ~~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 165 AAYDGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp TCEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCcCEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 789999983 32 335889999999999999998543
No 158
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.64 E-value=5.9e-15 Score=125.09 Aligned_cols=119 Identities=12% Similarity=0.204 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcC-CHHHHHHHHHHH-----HHcCCC----CCeEE
Q 024096 19 QMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITL-SEEQLKYAEIKV-----REAGLQ----DHIRF 88 (272)
Q Consensus 19 q~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~-s~~~~~~a~~~~-----~~~g~~----~~i~~ 88 (272)
.....+.+.+.....++.+|||+|||+|.++..+++....+|+++|+ ++.+++.+++++ ..+++. +++.+
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 34445566665555678899999999999999998863349999999 899999999999 555553 47888
Q ss_pred EEcccCCCC-------CCCCccEEEEechhhccChhhHHHHHHHHHhcCc---c--CcEEEEE
Q 024096 89 YLCDYRQLP-------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLA---T--HGLLVLQ 139 (272)
Q Consensus 89 ~~~d~~~~~-------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~Lk---p--gG~l~i~ 139 (272)
...|..+.. .+++||+|++..+++|. .+...+++.+.++|+ | ||++++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 877765532 24789999999999987 567899999999999 9 9998773
No 159
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.64 E-value=2.9e-15 Score=129.80 Aligned_cols=123 Identities=19% Similarity=0.218 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-CeEEEEcccCCC
Q 024096 19 QMRKVSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQD-HIRFYLCDYRQL 96 (272)
Q Consensus 19 q~~~~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~-~i~~~~~d~~~~ 96 (272)
|......+.+.+. ..++.+|||+|||+|.++..+++. +++|+++|+|+.+++.+++++..+++.+ +++++++|+.+.
T Consensus 137 q~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~ 215 (332)
T 2igt_A 137 QIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKF 215 (332)
T ss_dssp GHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHH
Confidence 3333334444432 456789999999999999999986 6699999999999999999999998865 599999998775
Q ss_pred CC-----CCCccEEEEechhhccC--------hhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 97 PK-----ANKYDRIISCGMIEHVG--------HDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 97 ~~-----~~~fD~V~~~~~~~~~~--------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
.. .++||+|++........ .++...+++++.++|+|||.+++....
T Consensus 216 l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 216 IQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 41 57899999965421111 145678999999999999998876554
No 160
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.64 E-value=3.9e-15 Score=122.53 Aligned_cols=105 Identities=23% Similarity=0.275 Sum_probs=90.3
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC-CCccEEEEec
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA-NKYDRIISCG 109 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~-~~fD~V~~~~ 109 (272)
++++.+|||||||+|.++..+++. +..+|+++|+++.+++.|+++++.+|+.+++++.++|..+...+ ++||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 357889999999999999999997 45689999999999999999999999988899999998876643 4699998765
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+ +.+-...++....+.|+++++++++.
T Consensus 99 m----Gg~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 99 M----GGTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp E----CHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred C----chHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 4 33446789999999999999999864
No 161
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.64 E-value=1.6e-16 Score=128.70 Aligned_cols=117 Identities=20% Similarity=0.184 Sum_probs=76.2
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC
Q 024096 20 MRKVSVLIEKARV-SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP 97 (272)
Q Consensus 20 ~~~~~~l~~~l~~-~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~ 97 (272)
...++.+++.+.. .++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.+++++...+. +++++++|+.+..
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 92 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWL 92 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhh
Confidence 4456777777765 78899999999999999999998 577999999999999999999887765 7899999987732
Q ss_pred CC-----CCccEEEEechhhcc------Chhh------------------HHHHHHHHHhcCccCcEEEE
Q 024096 98 KA-----NKYDRIISCGMIEHV------GHDY------------------MEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 98 ~~-----~~fD~V~~~~~~~~~------~~~~------------------~~~~l~~~~~~LkpgG~l~i 138 (272)
++ ++||+|+++..+.+. +... ...+++++.++|||||++++
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 43 899999997654332 1111 16788999999999999444
No 162
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=8e-16 Score=129.01 Aligned_cols=114 Identities=15% Similarity=0.239 Sum_probs=93.8
Q ss_pred HHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH---cCCCCCeEEEEcccCCCC----
Q 024096 26 LIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVRE---AGLQDHIRFYLCDYRQLP---- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~---~g~~~~i~~~~~d~~~~~---- 97 (272)
+...+...++.+|||+|||+|.++..++++ ++.+++|+|+++.+++.|++++.. +++.+++.++++|+.+..
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV 107 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh
Confidence 344556678889999999999999999998 568999999999999999999988 888778999999998872
Q ss_pred ----CCCCccEEEEechhhcc----------------ChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 ----KANKYDRIISCGMIEHV----------------GHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ----~~~~fD~V~~~~~~~~~----------------~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
++++||+|+++..+... .......+++.+.++|||||++++.
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 35789999998544322 1223678999999999999999984
No 163
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.64 E-value=1.5e-15 Score=131.64 Aligned_cols=114 Identities=25% Similarity=0.320 Sum_probs=94.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~f 102 (272)
+.+.+.+...++.+|||+|||+|.++..+++....+|+|+|++ .+++.|+++++.+++.++++++++|+.+++ ++++|
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 106 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKV 106 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCE
T ss_pred HHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcc
Confidence 3444455556788999999999999999998744599999999 589999999999999888999999999987 55899
Q ss_pred cEEEEechhhccC-hhhHHHHHHHHHhcCccCcEEEE
Q 024096 103 DRIISCGMIEHVG-HDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 103 D~V~~~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
|+|++..+.+++. ...+..++..+.++|||||+++.
T Consensus 107 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 107 DIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999986544442 24567899999999999999974
No 164
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.64 E-value=2.5e-17 Score=136.42 Aligned_cols=103 Identities=18% Similarity=0.217 Sum_probs=91.9
Q ss_pred CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhhc
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIEH 113 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~ 113 (272)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++.++++++++|+.+.+++++||+|++..++++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGG 156 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSS
T ss_pred CCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCC
Confidence 6889999999999999999996 789999999999999999999999886689999999988876689999999999998
Q ss_pred cChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 114 VGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.+. ....+.++.++|+|||.+++.
T Consensus 157 ~~~--~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 PDY--ATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GGG--GGSSSBCTTTSCSSCHHHHHH
T ss_pred cch--hhhHHHHHHhhcCCcceeHHH
Confidence 743 345777899999999997763
No 165
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.63 E-value=7.9e-16 Score=128.20 Aligned_cols=120 Identities=13% Similarity=0.113 Sum_probs=95.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHc---CCCCC--------
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREA---GLQDH-------- 85 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~---g~~~~-------- 85 (272)
...++.+++.+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++... ++.++
T Consensus 37 ~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 37 TEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 345566777666556789999999999999999875 3579999999999999999888755 43222
Q ss_pred -----------------eE-------------EEEcccCCCC------CCCCccEEEEechhhccCh-------hhHHHH
Q 024096 86 -----------------IR-------------FYLCDYRQLP------KANKYDRIISCGMIEHVGH-------DYMEEF 122 (272)
Q Consensus 86 -----------------i~-------------~~~~d~~~~~------~~~~fD~V~~~~~~~~~~~-------~~~~~~ 122 (272)
++ +.++|+.+.. ..++||+|+++.++.+... +....+
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~ 196 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGL 196 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHH
Confidence 56 9999988754 3348999999987665532 456789
Q ss_pred HHHHHhcCccCcEEEEE
Q 024096 123 FGCCESLLATHGLLVLQ 139 (272)
Q Consensus 123 l~~~~~~LkpgG~l~i~ 139 (272)
++++.++|+|||++++.
T Consensus 197 l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 197 LRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHSCTTCEEEEE
T ss_pred HHHHHHhcCCCcEEEEe
Confidence 99999999999999984
No 166
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.63 E-value=8.6e-15 Score=120.16 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=83.8
Q ss_pred HHHHHHc---CCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 24 SVLIEKA---RVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 24 ~~l~~~l---~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
..+++.+ .+.+|.+|||+|||+|..+..+++. +..+|+++|+++.+++...+..+.. .++.++++|+....
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~ 139 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQS 139 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGG
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchh
Confidence 4444444 4889999999999999999999987 4679999999999876655555443 48999999987643
Q ss_pred ---CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 98 ---KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 98 ---~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
..++||+|++..+. + .....+.+.+.+.|||||+++++.
T Consensus 140 ~~~~~~~~D~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 140 YKSVVENVDVLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp TTTTCCCEEEEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccccceEEEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEE
Confidence 24689999997543 1 223345566677999999999863
No 167
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.63 E-value=1.3e-15 Score=125.00 Aligned_cols=90 Identities=23% Similarity=0.307 Sum_probs=78.8
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc-CCCC-C-CCCccEEEEec
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY-RQLP-K-ANKYDRIISCG 109 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~-~~~~-~-~~~fD~V~~~~ 109 (272)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ ..+++++++|+ ..++ + +++||+|++..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~ 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSRR 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEES
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeCC
Confidence 57889999999999999999997 78999999999999999987 14799999999 5566 4 68999999971
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
++..+++++.++|||||+++
T Consensus 120 --------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 --------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp --------CCSGGGGGHHHHEEEEEEEE
T ss_pred --------CHHHHHHHHHHHcCCCcEEE
Confidence 33678899999999999998
No 168
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.63 E-value=4.8e-16 Score=127.22 Aligned_cols=106 Identities=21% Similarity=0.209 Sum_probs=90.7
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CC----CCcc
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KA----NKYD 103 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~----~~fD 103 (272)
.++.+|||+|||+|..+..+++. + +.+|+++|+++.+++.+++++...++.++++++++|+.+.. .. ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46789999999999999999987 4 78999999999999999999999998878999999986542 11 7899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
+|++... ......+++++.++|||||++++.+...
T Consensus 143 ~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 143 LIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred EEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 9997653 2345789999999999999999976653
No 169
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.62 E-value=3.7e-15 Score=128.37 Aligned_cols=117 Identities=13% Similarity=0.147 Sum_probs=95.0
Q ss_pred HHHHHcCCCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCC
Q 024096 25 VLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANK 101 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~ 101 (272)
.+...+...++.+|||+|||+|..+..+++. . +.+|+++|+++.+++.+++++...|+. ++.++++|+.+++ .+++
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 187 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVE 187 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCC
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccccccc
Confidence 3455667889999999999999999999987 2 479999999999999999999998885 7999999998876 4578
Q ss_pred ccEEEEech------hhccCh--------------hhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 102 YDRIISCGM------IEHVGH--------------DYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 102 fD~V~~~~~------~~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
||+|++... +.+.++ +....+++++.++|||||++++++.+
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 999998533 222211 11258999999999999999997665
No 170
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.61 E-value=1.8e-15 Score=131.85 Aligned_cols=116 Identities=17% Similarity=0.252 Sum_probs=97.2
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
+.+++.+...++.+|||+|||+|.++..+++. +..+++++|+|+.+++.+++++..+++. ++++.+|+.+.+ +++|
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~-~~~f 262 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV-KGRF 262 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC-CSCE
T ss_pred HHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc-cCCe
Confidence 44667776566789999999999999999988 5579999999999999999999988763 677899987654 5789
Q ss_pred cEEEEechhhcc---ChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 103 DRIISCGMIEHV---GHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 103 D~V~~~~~~~~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|+|+++.++++- ..++...+++++.++|||||.+++....
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 999999988752 2356689999999999999999986543
No 171
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.61 E-value=4.9e-15 Score=125.18 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=95.3
Q ss_pred HHHHcCCCCCCEEEEECCCchHHHHHHHHc-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----
Q 024096 26 LIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TG-CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----- 98 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~-~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----- 98 (272)
+...++..++.+|||+|||+|..+..+++. .+ .+|+++|+++.+++.++++++..|+. ++.++++|+.+++.
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~ 153 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKN 153 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHT
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhc
Confidence 344567788999999999999999999986 44 79999999999999999999999885 89999999987652
Q ss_pred CCCccEEEEechhhccC----------------hhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 99 ANKYDRIISCGMIEHVG----------------HDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~----------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
.++||+|++.......+ .+....+++++.++|||||++++++.+.
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 57899999974322110 0234789999999999999999977653
No 172
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.61 E-value=5.3e-15 Score=125.05 Aligned_cols=111 Identities=19% Similarity=0.216 Sum_probs=95.6
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANK 101 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 101 (272)
..+++.+.+.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.+++++...++.+++.+..+|+.+..++++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD 181 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCc
Confidence 56778888899999999999999999999987 3689999999999999999999988876689999999887654568
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
||+|++. .+ +...+++++.++|+|||++++...
T Consensus 182 ~D~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 182 VDALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp EEEEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9999984 32 335889999999999999998643
No 173
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.61 E-value=1.1e-15 Score=119.49 Aligned_cols=103 Identities=20% Similarity=0.298 Sum_probs=84.9
Q ss_pred CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C----CCCCccEEEEe
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P----KANKYDRIISC 108 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~----~~~~fD~V~~~ 108 (272)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...++ +++++++|+.+. + ..++||+|++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 6789999999999999999987 56699999999999999999998876 799999998774 2 13489999999
Q ss_pred chhhccChhhHHHHHHHHH--hcCccCcEEEEEeecC
Q 024096 109 GMIEHVGHDYMEEFFGCCE--SLLATHGLLVLQFISA 143 (272)
Q Consensus 109 ~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~ 143 (272)
.+++ - ....+++.+. ++|+|||.++++....
T Consensus 118 ~~~~-~---~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 118 PPYA-M---DLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCTT-S---CTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCc-h---hHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 8765 1 1245555565 9999999999976653
No 174
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.61 E-value=7.9e-16 Score=127.32 Aligned_cols=108 Identities=19% Similarity=0.208 Sum_probs=90.7
Q ss_pred cCCCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C---C-----
Q 024096 30 ARVSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P---K----- 98 (272)
Q Consensus 30 l~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~---~----- 98 (272)
+...++.+|||+|||+|..+..+++. + +.+++++|+++.+++.+++++...++.+++.++++|+.+. + .
T Consensus 56 ~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 56 TKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred HHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccc
Confidence 33457889999999999999999987 3 6899999999999999999999988876799999997653 2 1
Q ss_pred --------C-CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 99 --------A-NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 99 --------~-~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+ ++||+|++..... ....+++++.++|+|||++++.+..
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred cccccccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEEccc
Confidence 2 7899999975433 4478999999999999999986644
No 175
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.61 E-value=2e-15 Score=132.18 Aligned_cols=106 Identities=24% Similarity=0.281 Sum_probs=89.5
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechh
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMI 111 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~ 111 (272)
..+|.+|||||||+|.++..+++....+|+++|.|+ +++.|+++++.+|+.++|.++++|++++..++++|+|++..+-
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~ 159 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMG 159 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCB
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccc
Confidence 347889999999999999988886445899999996 8899999999999999999999999998866899999996544
Q ss_pred hccChh-hHHHHHHHHHhcCccCcEEEE
Q 024096 112 EHVGHD-YMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 112 ~~~~~~-~~~~~l~~~~~~LkpgG~l~i 138 (272)
..+..+ .+..++....++|||||.++-
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccchhhhHHHHHHhhCCCCceECC
Confidence 333323 567888888999999999874
No 176
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.61 E-value=1e-14 Score=119.41 Aligned_cols=111 Identities=22% Similarity=0.220 Sum_probs=92.2
Q ss_pred HHHHHHcC--CCCCCEEEEECCCchHHHHHHHHcc--CCEEEEEcCCHHHHHHHHHHHHHcCC----CCCeEEEEcccCC
Q 024096 24 SVLIEKAR--VSKGQEVLDIGCGWGTLAIEIVKQT--GCKYTGITLSEEQLKYAEIKVREAGL----QDHIRFYLCDYRQ 95 (272)
Q Consensus 24 ~~l~~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~g~----~~~i~~~~~d~~~ 95 (272)
..+++.+. +.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++...+. .+++.+.++|+..
T Consensus 65 ~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 65 AYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 45566665 6788999999999999999999873 36999999999999999999887653 3589999999886
Q ss_pred CC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 96 LP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 96 ~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
.. ..++||+|++..+++++. +++.+.|||||++++...+
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CcccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 65 457899999998887763 4678999999999997554
No 177
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.61 E-value=1.9e-15 Score=140.19 Aligned_cols=110 Identities=18% Similarity=0.254 Sum_probs=91.6
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CCCCccEEEEec
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KANKYDRIISCG 109 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~~~fD~V~~~~ 109 (272)
..+.+|||||||.|.++..||+. |++|+|+|+++.+++.|+..+...|.. ++.+.+++++++. .+++||+|++.+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEECc
Confidence 35679999999999999999997 999999999999999999999887642 6999999999874 457899999999
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEEEEeecCC
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAP 144 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 144 (272)
+++|+++.+....+..+.+.|+++|..++..+...
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~ 177 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVK 177 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCT
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEeccc
Confidence 99999654333445567788899988877665543
No 178
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.61 E-value=5.1e-15 Score=122.11 Aligned_cols=113 Identities=23% Similarity=0.312 Sum_probs=94.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-CCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-LPKA 99 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~~~~ 99 (272)
.....+++.+.+.++.+|||+|||+|.++..+++..+.+|+++|+++.+++.+++++...++. ++.+..+|+.. ++..
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 156 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPPK 156 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCCC
Confidence 345677788888899999999999999999999883389999999999999999999988875 59999999732 2233
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
.+||+|++..+++++++ ++.+.|+|||++++....
T Consensus 157 ~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEec
Confidence 46999999999998853 578899999999996554
No 179
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.61 E-value=4.9e-15 Score=124.73 Aligned_cols=105 Identities=18% Similarity=0.235 Sum_probs=86.5
Q ss_pred CCCEEEEECCCchH----HHHHHHHc-c----CCEEEEEcCCHHHHHHHHHHHHH-----------------------cC
Q 024096 34 KGQEVLDIGCGWGT----LAIEIVKQ-T----GCKYTGITLSEEQLKYAEIKVRE-----------------------AG 81 (272)
Q Consensus 34 ~~~~vLDiG~G~G~----~~~~l~~~-~----~~~v~gvd~s~~~~~~a~~~~~~-----------------------~g 81 (272)
++.+|||+|||+|. ++..+++. + +.+|+|+|+|+.+++.|++.+-. .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 66667765 3 36999999999999999986410 00
Q ss_pred -------CCCCeEEEEcccCCCC-C-CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 82 -------LQDHIRFYLCDYRQLP-K-ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 82 -------~~~~i~~~~~d~~~~~-~-~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
+.+++.|.++|+.+.+ + .++||+|+|.+++.|++++....+++++++.|+|||++++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 0136999999998854 2 5789999999999999887789999999999999999998
No 180
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.60 E-value=2e-15 Score=122.41 Aligned_cols=105 Identities=15% Similarity=0.145 Sum_probs=89.1
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C-CCCCccEEEEe
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P-KANKYDRIISC 108 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~-~~~~fD~V~~~ 108 (272)
.++.+|||+|||+|..+..+++. + +.+|+++|+++.+++.+++++...++.++++++++|+.+. + .++ ||+|++.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 35679999999999999999987 4 7899999999999999999999888877899999998764 3 345 9999987
Q ss_pred chhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 109 GMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 109 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
... .+...+++++.++|||||++++.+...
T Consensus 134 ~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 134 CDV-----FNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp TTT-----SCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred CCh-----hhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 432 345789999999999999999866543
No 181
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.60 E-value=5.8e-15 Score=124.25 Aligned_cols=110 Identities=19% Similarity=0.244 Sum_probs=93.5
Q ss_pred HHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccE
Q 024096 25 VLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDR 104 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~ 104 (272)
.+.+. .++|.+|||+|||+|.++..+++...++|+++|++|.+++.++++++.+++.++++++++|..+++..+.||.
T Consensus 118 ri~~~--~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~ 195 (278)
T 3k6r_A 118 RMAKV--AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADR 195 (278)
T ss_dssp HHHHH--CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEE
T ss_pred HHHHh--cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCE
Confidence 34444 4589999999999999999999875579999999999999999999999999899999999999887789999
Q ss_pred EEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 105 IISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 105 V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|+++.... ...++..+.++|||||.+.+....
T Consensus 196 Vi~~~p~~------~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 196 ILMGYVVR------THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEECCCSS------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCCCc------HHHHHHHHHHHcCCCCEEEEEeee
Confidence 99864322 145777788899999999886554
No 182
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.60 E-value=1.4e-14 Score=120.13 Aligned_cols=111 Identities=15% Similarity=0.187 Sum_probs=96.4
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANK 101 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~ 101 (272)
...+++.+.+.++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....++.+++.+..+|+.+.. +++.
T Consensus 80 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 80 SFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 346777888889999999999999999999998 88999999999999999999998888678999999998866 5678
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
||+|++. .+ ++..+++++.++|+|||++++...
T Consensus 159 ~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 159 FHAAFVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp BSEEEEC-----SS--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ccEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9999983 32 335789999999999999998544
No 183
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.60 E-value=2.5e-16 Score=130.71 Aligned_cols=108 Identities=18% Similarity=0.185 Sum_probs=92.6
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C------CCCcc
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K------ANKYD 103 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~------~~~fD 103 (272)
.++.+|||+|||+|..+..+++. + +.+|+++|+++.+++.|+++++..++.++++++++|+.+.. . .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 45679999999999999999997 3 78999999999999999999999999889999999987653 1 47899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCC
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPD 145 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 145 (272)
+|++... ..+...+++++.++|||||++++.+.....
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 9998754 244578999999999999999997766433
No 184
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.60 E-value=4.3e-15 Score=122.69 Aligned_cols=107 Identities=19% Similarity=0.310 Sum_probs=83.7
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH------cCCCCCeEEEEcccCC-CC---CCC
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVRE------AGLQDHIRFYLCDYRQ-LP---KAN 100 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~------~g~~~~i~~~~~d~~~-~~---~~~ 100 (272)
..++.+|||||||+|.++..+++. ++..++|+|+|+.+++.|++++.. .++ .++.++++|+.+ ++ +++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCc
Confidence 456779999999999999999988 678999999999999999988764 344 489999999987 44 467
Q ss_pred CccEEEEechhhccCh---h---hHHHHHHHHHhcCccCcEEEEE
Q 024096 101 KYDRIISCGMIEHVGH---D---YMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~---~---~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+||.|++...-.+... + ....+++++.++|||||.+++.
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 8999998654333210 0 0147999999999999999985
No 185
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.60 E-value=7.8e-15 Score=124.49 Aligned_cols=116 Identities=16% Similarity=0.205 Sum_probs=91.9
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
++.+++.+...++.+|||+|||+|.++..+++.++.+|+|+|+|+.+++.|++++..+++.++++++++|+.+..+ ++|
T Consensus 112 v~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~-~~f 190 (284)
T 1nv8_A 112 VELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK-EKF 190 (284)
T ss_dssp HHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-GGT
T ss_pred HHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-ccc
Confidence 3455555443466799999999999999998876789999999999999999999999987779999999887432 478
Q ss_pred ---cEEEEechhh-----------ccCh------hhHHHHHHHHH-hcCccCcEEEEE
Q 024096 103 ---DRIISCGMIE-----------HVGH------DYMEEFFGCCE-SLLATHGLLVLQ 139 (272)
Q Consensus 103 ---D~V~~~~~~~-----------~~~~------~~~~~~l~~~~-~~LkpgG~l~i~ 139 (272)
|+|+++.... |-+. .+...+++++. +.|+|||++++.
T Consensus 191 ~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 191 ASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 9999984322 2221 11127899999 999999999984
No 186
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.60 E-value=7.3e-15 Score=124.18 Aligned_cols=112 Identities=18% Similarity=0.287 Sum_probs=96.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-C-CCCCeEEEEcccCCCC-
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREA-G-LQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~-g-~~~~i~~~~~d~~~~~- 97 (272)
...+++.+++.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.+++++... | +.+++.+.++|+.+.+
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 456778888899999999999999999999986 4789999999999999999999877 4 4468999999998876
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++++||+|++. ++ ++..+++++.++|+|||++++...
T Consensus 168 ~~~~~D~v~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 168 PDGSVDRAVLD-----ML--APWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CTTCEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCceeEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 56789999983 32 235889999999999999998654
No 187
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.59 E-value=2.1e-15 Score=125.47 Aligned_cols=105 Identities=14% Similarity=0.153 Sum_probs=90.1
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C-C------CCCc
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P-K------ANKY 102 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~-~------~~~f 102 (272)
.++.+|||||||+|..+..+++. + +.+++++|+++.+++.|++++...++.++++++++|+.+. + . .++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 45679999999999999999987 4 7899999999999999999999999877899999998764 2 1 5789
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|+|++.... .+...+++++.++|||||++++.+..
T Consensus 158 D~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 158 DFIFVDADK-----DNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp SEEEECSCS-----TTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred EEEEEcCch-----HHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 999986432 34578999999999999999986554
No 188
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.59 E-value=1.6e-14 Score=121.44 Aligned_cols=96 Identities=21% Similarity=0.275 Sum_probs=82.6
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEech
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGM 110 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~ 110 (272)
.++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.++++. .++.+..+|+.+++ ++++||+|++..+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 57889999999999999999987 5789999999999999998763 36899999999888 6679999998754
Q ss_pred hhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 111 IEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
. ..++++.++|||||++++.++..
T Consensus 158 ~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 P---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp C---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred h---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 2 35788999999999999976653
No 189
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=7.9e-15 Score=123.74 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=91.7
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEec
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCG 109 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~ 109 (272)
.+.++.+|||+|||+|.++..+++. ...+|+++|+++.+++.++++++.+++. ++.++++|+.+.+..++||+|++..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVELKDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCCTTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCccCCceEEEECC
Confidence 3568899999999999999999997 4679999999999999999999999885 6899999998874346899999986
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
.. ....+++++.+.|+|||.+++++...
T Consensus 195 p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 VH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 54 23578889999999999999987763
No 190
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.59 E-value=3.1e-15 Score=121.54 Aligned_cols=120 Identities=20% Similarity=0.289 Sum_probs=93.5
Q ss_pred HHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCcc
Q 024096 26 LIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYD 103 (272)
Q Consensus 26 l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD 103 (272)
+++.+. ..++.+|||+|||+|.++..+ ..+++|+|+|+. ++.+.++|+.+++ ++++||
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD 117 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSI----RNPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVD 117 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS----------------STTEEESCTTSCSCCTTCEE
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC----------------CceEEEeccccCCCCCCCEe
Confidence 444443 457789999999999998876 368999999986 4678899999887 567899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCC
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSG 183 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~G 183 (272)
+|++..++++ .+...+++++.++|+|||++++.++.. ...+.+++.. +++++|
T Consensus 118 ~v~~~~~l~~---~~~~~~l~~~~~~L~~gG~l~i~~~~~-----------------------~~~~~~~~~~-~l~~~G 170 (215)
T 2zfu_A 118 VAVFCLSLMG---TNIRDFLEEANRVLKPGGLLKVAEVSS-----------------------RFEDVRTFLR-AVTKLG 170 (215)
T ss_dssp EEEEESCCCS---SCHHHHHHHHHHHEEEEEEEEEEECGG-----------------------GCSCHHHHHH-HHHHTT
T ss_pred EEEEehhccc---cCHHHHHHHHHHhCCCCeEEEEEEcCC-----------------------CCCCHHHHHH-HHHHCC
Confidence 9999999964 466899999999999999999976531 1125666664 445699
Q ss_pred cEEEEEEec
Q 024096 184 LCVEHLENI 192 (272)
Q Consensus 184 f~v~~~~~~ 192 (272)
|.++.....
T Consensus 171 f~~~~~~~~ 179 (215)
T 2zfu_A 171 FKIVSKDLT 179 (215)
T ss_dssp EEEEEEECC
T ss_pred CEEEEEecC
Confidence 999876543
No 191
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.58 E-value=2.4e-14 Score=125.29 Aligned_cols=117 Identities=27% Similarity=0.279 Sum_probs=97.8
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KA 99 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~ 99 (272)
...++......++.+|||+|||+|.++..++.. ++.+++|+|+++.+++.|+++++..|+. ++++.++|+.+++ +.
T Consensus 192 a~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 192 AQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTC
T ss_pred HHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcccc
Confidence 355677778888999999999999999999986 3589999999999999999999999987 8999999999987 55
Q ss_pred CCccEEEEechhhccCh------hhHHHHHHHHHhcCccCcEEEEEe
Q 024096 100 NKYDRIISCGMIEHVGH------DYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~------~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+.||+|+++........ +....+++++.++|||||++++.+
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 67999999766533211 123678999999999999999853
No 192
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.58 E-value=1.4e-14 Score=118.68 Aligned_cols=106 Identities=22% Similarity=0.160 Sum_probs=86.3
Q ss_pred HHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----CCC
Q 024096 27 IEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----KAN 100 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----~~~ 100 (272)
++.+.+.++.+|||+|||+|.++..+++. ++.+|+|+|+++.+++.++++++.. .+++++++|+.+.. ..+
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCC
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccC
Confidence 44445778999999999999999999987 3479999999999999999887654 48999999998732 346
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+||+|++... .......+++++.++|||||++++.
T Consensus 143 ~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999998654 1123345699999999999999987
No 193
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.57 E-value=1.5e-14 Score=118.45 Aligned_cols=111 Identities=14% Similarity=0.264 Sum_probs=92.0
Q ss_pred HHHHHHc--CCCCCCEEEEECCCchHHHHHHHHccC------CEEEEEcCCHHHHHHHHHHHHHcCC----CCCeEEEEc
Q 024096 24 SVLIEKA--RVSKGQEVLDIGCGWGTLAIEIVKQTG------CKYTGITLSEEQLKYAEIKVREAGL----QDHIRFYLC 91 (272)
Q Consensus 24 ~~l~~~l--~~~~~~~vLDiG~G~G~~~~~l~~~~~------~~v~gvd~s~~~~~~a~~~~~~~g~----~~~i~~~~~ 91 (272)
..+++.+ .+.++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.+++++...++ .+++.+.++
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 4555655 467889999999999999999998733 5999999999999999999988773 358999999
Q ss_pred ccCCCC-----CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 92 DYRQLP-----KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 92 d~~~~~-----~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|+.+.. ..++||+|++...++++. +++.+.|||||++++....
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEcc
Confidence 988753 346899999998888763 5678899999999997654
No 194
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.57 E-value=6.9e-15 Score=121.63 Aligned_cols=105 Identities=15% Similarity=0.142 Sum_probs=89.8
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--C------CCCc
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--K------ANKY 102 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~------~~~f 102 (272)
.++.+|||||||+|..+..+++. + +.+++++|+++.+++.+++++...|+.++++++++|+.+.. . .++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 45679999999999999999987 4 78999999999999999999999998778999999987642 1 4789
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|+|++... ......+++++.++|+|||++++.+..
T Consensus 149 D~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 149 DFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp EEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 99998643 245578999999999999999986554
No 195
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.56 E-value=9.3e-15 Score=119.89 Aligned_cols=111 Identities=17% Similarity=0.190 Sum_probs=91.2
Q ss_pred HHHHHHHc--CCCCCCEEEEECCCchHHHHHHHHccC-------CEEEEEcCCHHHHHHHHHHHHHcCC----CCCeEEE
Q 024096 23 VSVLIEKA--RVSKGQEVLDIGCGWGTLAIEIVKQTG-------CKYTGITLSEEQLKYAEIKVREAGL----QDHIRFY 89 (272)
Q Consensus 23 ~~~l~~~l--~~~~~~~vLDiG~G~G~~~~~l~~~~~-------~~v~gvd~s~~~~~~a~~~~~~~g~----~~~i~~~ 89 (272)
...+++.+ .+.++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.+++++...+. ..++.+.
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 45566666 467889999999999999999998633 5999999999999999999876541 2479999
Q ss_pred EcccCCCC-CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 90 LCDYRQLP-KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 90 ~~d~~~~~-~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++|..+.. ..++||+|++..+++++. +++.+.|||||++++...
T Consensus 151 ~~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 151 EGDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp ESCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred ECCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 99988733 337899999999988874 568899999999998644
No 196
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.55 E-value=1.7e-13 Score=110.53 Aligned_cols=100 Identities=13% Similarity=0.116 Sum_probs=84.2
Q ss_pred HHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEE
Q 024096 27 IEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRII 106 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~ 106 (272)
+......++.+|||+|||+|.++..+++....+++|+|+++.+++.+++++..+++ +++++++|+.+++ ++||+|+
T Consensus 42 ~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~v~ 117 (207)
T 1wy7_A 42 AYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDIVI 117 (207)
T ss_dssp HHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSEEE
T ss_pred HHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCEEE
Confidence 33445567889999999999999999987335899999999999999999988776 7999999999876 5899999
Q ss_pred EechhhccChhhHHHHHHHHHhcC
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLL 130 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~L 130 (272)
++..+++........+++++.+.+
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred EcCCCccccCCchHHHHHHHHHhc
Confidence 999887765444467888888888
No 197
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.55 E-value=8.4e-15 Score=123.80 Aligned_cols=107 Identities=13% Similarity=0.106 Sum_probs=82.5
Q ss_pred HHHHHHHHcCCC-CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEE-EEcccCCCC--
Q 024096 22 KVSVLIEKARVS-KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRF-YLCDYRQLP-- 97 (272)
Q Consensus 22 ~~~~l~~~l~~~-~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~-~~~d~~~~~-- 97 (272)
++..+++.+.+. ++.+|||+|||+|.++..+++....+|+|+|+|+.|++.+.++. .++.. ...|+..++
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchh
Confidence 567778888765 57899999999999999999874459999999999998854321 23433 234454443
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+..+||+|++..+++++ ..+++++.++|||||++++.
T Consensus 146 ~l~~~~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL-----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred hCCCCCCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE
Confidence 22359999998888766 68999999999999999985
No 198
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.55 E-value=7.4e-15 Score=121.02 Aligned_cols=106 Identities=18% Similarity=0.192 Sum_probs=89.6
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C----CC--CCcc
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P----KA--NKYD 103 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~----~~--~~fD 103 (272)
.++.+|||+|||+|..+..+++. + +.+++++|+++.+++.|++++...++.++++++++|+.+. + .+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 35679999999999999999987 3 6799999999999999999999888877899999997553 2 12 7899
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
+|++.... .+...+++++.++|+|||++++.+...
T Consensus 151 ~V~~d~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 151 LIFIDADK-----RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEEECSCG-----GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 99987542 455789999999999999999976553
No 199
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.54 E-value=4.1e-14 Score=117.55 Aligned_cols=106 Identities=19% Similarity=0.352 Sum_probs=84.2
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--------CCCCCeEEEEcccCC-CC---CC
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREA--------GLQDHIRFYLCDYRQ-LP---KA 99 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~--------g~~~~i~~~~~d~~~-~~---~~ 99 (272)
.++.+|||||||+|.++..+++. ++.+++|+|+|+.+++.+++++..+ ++ .++.++++|+.+ ++ ..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 46789999999999999999998 5679999999999999999998776 66 479999999887 43 35
Q ss_pred CCccEEEEechhhccChh------hHHHHHHHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGMIEHVGHD------YMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+.+|.|+....-.+.... ....+++++.++|+|||.+++.
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 789999865322211000 0047999999999999999984
No 200
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.54 E-value=1e-14 Score=119.66 Aligned_cols=106 Identities=15% Similarity=0.199 Sum_probs=89.9
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---C-C---CCc
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---K-A---NKY 102 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~-~---~~f 102 (272)
..++.+|||+|||+|..+..+++. + +.+++++|+++.+++.++++++..++.++++++++|+.+.. . . ++|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 356789999999999999999987 3 68999999999999999999999988779999999986542 1 1 689
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|+|++... ......+++++.++|+|||.+++.+..
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 99999654 234578999999999999999986654
No 201
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.53 E-value=5.3e-14 Score=122.20 Aligned_cols=113 Identities=13% Similarity=0.229 Sum_probs=90.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcC----------CCCCeEEEE
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAG----------LQDHIRFYL 90 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g----------~~~~i~~~~ 90 (272)
...+++.+.+.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++...+ +..++++++
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 455777788899999999999999999999987 23799999999999999999987532 235899999
Q ss_pred cccCCCC---CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 91 CDYRQLP---KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 91 ~d~~~~~---~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+|+.+.. ++++||+|++... ....+++++.++|+|||++++....
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp SCTTCCC-------EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CChHHcccccCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9998863 3468999998532 1134889999999999999986543
No 202
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.53 E-value=6.9e-14 Score=112.26 Aligned_cols=108 Identities=19% Similarity=0.238 Sum_probs=82.7
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHc-c--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 23 VSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQ-T--GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 23 ~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~-~--~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
+..+.+++. +.++.+|||+|||+|.++..++++ + +.+|+|+|+|+.. .. +++.++++|+.+.+
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~ 77 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNM 77 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSS
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhh
Confidence 444566655 578899999999999999999987 4 5899999999831 12 47899999998765
Q ss_pred -------------------------CCCCccEEEEechhhccChh--h-------HHHHHHHHHhcCccCcEEEEEeec
Q 024096 98 -------------------------KANKYDRIISCGMIEHVGHD--Y-------MEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 98 -------------------------~~~~fD~V~~~~~~~~~~~~--~-------~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++++||+|++..++++.+.. + ...+++++.++|||||.+++..+.
T Consensus 78 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 78 NNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp CCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 34689999998876664211 1 124789999999999999985543
No 203
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.52 E-value=9.7e-15 Score=120.64 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=79.9
Q ss_pred CCCEEEEECCCchHHHHHHHHc-----cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC---C--CCCCcc
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ-----TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL---P--KANKYD 103 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~-----~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~---~--~~~~fD 103 (272)
++.+|||||||+|..+..+++. ++++|+|+|+++.+++.|+ ++.++++++++|+.+. + ...+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCCC
Confidence 4679999999999999999885 4789999999999988886 1235899999999885 4 234799
Q ss_pred EEEEechhhccChhhHHHHHHHHHh-cCccCcEEEEEee
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCES-LLATHGLLVLQFI 141 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~-~LkpgG~l~i~~~ 141 (272)
+|++... |. +...+++++.+ +|||||++++.+.
T Consensus 155 ~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 155 LIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9998765 42 45789999997 9999999999654
No 204
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.52 E-value=1.9e-13 Score=123.28 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=95.9
Q ss_pred HHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--C-C
Q 024096 25 VLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TG-CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--K-A 99 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~-~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~-~ 99 (272)
.+...++..++.+|||+|||+|..+..+++. .+ .+++++|+++.+++.++++++..|+. ++.++++|+.+.+ . +
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 328 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEIIGE 328 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSSCS
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhhcc
Confidence 3455667889999999999999999999987 44 79999999999999999999998884 7999999998876 2 2
Q ss_pred CCccEEEEe------chhhccChh-------h-------HHHHHHHHHhcCccCcEEEEEeecC
Q 024096 100 NKYDRIISC------GMIEHVGHD-------Y-------MEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 100 ~~fD~V~~~------~~~~~~~~~-------~-------~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
++||+|++. +++.+.++. + ...+++++.++|||||++++++.+.
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 689999973 233333221 1 1578999999999999999987664
No 205
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.52 E-value=3.7e-14 Score=120.78 Aligned_cols=109 Identities=17% Similarity=0.238 Sum_probs=83.6
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcC---C-CCCeEEEEcccCCCC--CCCCccEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAG---L-QDHIRFYLCDYRQLP--KANKYDRI 105 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g---~-~~~i~~~~~d~~~~~--~~~~fD~V 105 (272)
.++.+|||||||+|.++..+++. +..+|+++|+++.+++.|++++...+ + .++++++.+|..+.. ..++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45689999999999999999988 56799999999999999999886542 1 348999999987764 45789999
Q ss_pred EEechhhccChhhH--HHHHHHHHhcCccCcEEEEEee
Q 024096 106 ISCGMIEHVGHDYM--EEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 106 ~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++.......+.... ..+++++.+.|+|||++++...
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99654433222222 6799999999999999998653
No 206
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.52 E-value=5.8e-14 Score=120.27 Aligned_cols=109 Identities=18% Similarity=0.153 Sum_probs=84.6
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH---cCCCCCeEEEEcccCCCC---CCCCccE
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVRE---AGLQDHIRFYLCDYRQLP---KANKYDR 104 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~---~g~~~~i~~~~~d~~~~~---~~~~fD~ 104 (272)
..++.+|||||||+|.++..+++. +..+++++|+++.+++.+++++.. ....++++++.+|+.+.. .+++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 356789999999999999999987 467999999999999999998742 112358999999987765 3578999
Q ss_pred EEEechhhccChhhH--HHHHHHHHhcCccCcEEEEEe
Q 024096 105 IISCGMIEHVGHDYM--EEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 105 V~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~ 140 (272)
|++.....+.+.... ..+++++.++|||||++++..
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999766554332222 589999999999999999863
No 207
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.51 E-value=7.2e-14 Score=118.61 Aligned_cols=115 Identities=12% Similarity=0.168 Sum_probs=90.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 99 (272)
...++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++....+..++++++++|+.+.+.+
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 345678888888889999999999999999999997 7799999999999999999987666556899999999887633
Q ss_pred CCccEEEEechhhccChhhHHHHHH--------------HH--HhcCccCcEEE
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFG--------------CC--ESLLATHGLLV 137 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~--------------~~--~~~LkpgG~l~ 137 (272)
.||+|+++...+..+ +....++. ++ +++|+|||.++
T Consensus 93 -~fD~vv~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 -FFDTCVANLPYQISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp -CCSEEEEECCGGGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred -hhcEEEEecCcccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 799999976554331 11222222 22 35889999764
No 208
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=1.2e-13 Score=122.13 Aligned_cols=110 Identities=14% Similarity=0.097 Sum_probs=89.4
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-CeEEEEcccCCCC-----CCCCccEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQD-HIRFYLCDYRQLP-----KANKYDRII 106 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~-~i~~~~~d~~~~~-----~~~~fD~V~ 106 (272)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.|+++++.+++.+ +++++++|+.+.. ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5788999999999999999998633499999999999999999999999865 8999999987632 246899999
Q ss_pred Eechhh-----ccC--hhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 107 SCGMIE-----HVG--HDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 107 ~~~~~~-----~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+..... +.. .+....+++.+.++|+|||.++++...
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 965442 221 134556888899999999999986543
No 209
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.51 E-value=8.4e-14 Score=124.90 Aligned_cols=120 Identities=14% Similarity=0.145 Sum_probs=96.5
Q ss_pred HHHHHcCCCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCC
Q 024096 25 VLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KAN 100 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~ 100 (272)
.+...+...++.+|||+|||+|+.+..+++. . ..+|+++|+++.+++.++++++..|+. ++.+.++|..+++ .++
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~ 174 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSG 174 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTT
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccc
Confidence 3445567889999999999999999999987 3 479999999999999999999999985 7999999988765 457
Q ss_pred CccEEEEech------hhccCh--------------hhHHHHHHHHHhcCccCcEEEEEeecCCC
Q 024096 101 KYDRIISCGM------IEHVGH--------------DYMEEFFGCCESLLATHGLLVLQFISAPD 145 (272)
Q Consensus 101 ~fD~V~~~~~------~~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 145 (272)
.||+|++... +.+-++ .....+++++.++|||||++++++.+...
T Consensus 175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 8999998643 211110 11237899999999999999998776543
No 210
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.50 E-value=1.4e-13 Score=123.59 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=94.7
Q ss_pred HHHHHcCCCCCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCC
Q 024096 25 VLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KAN 100 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~ 100 (272)
.+...+...++.+|||+|||+|+.+..+++. . ..+|+++|+|+.+++.++++++..|+. +.++++|+.+++ .++
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~ 169 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGT 169 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCS
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccc
Confidence 3445667889999999999999999999987 3 369999999999999999999999985 999999988776 357
Q ss_pred CccEEEEech------hhccCh-------h-------hHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 101 KYDRIISCGM------IEHVGH-------D-------YMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 101 ~fD~V~~~~~------~~~~~~-------~-------~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
+||+|++... +.+.++ + ....+++++.++|||||++++++.+.
T Consensus 170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 8999997432 222111 1 12678999999999999999987664
No 211
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.50 E-value=5.2e-14 Score=110.04 Aligned_cols=109 Identities=19% Similarity=0.241 Sum_probs=87.1
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 22 KVSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 22 ~~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
.+..+++.+. ..++.+|||+|||+|.++..+++. ++.+++++|+++ +++. .++.+.++|+.+.+
T Consensus 9 ~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~ 76 (180)
T 1ej0_A 9 KLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELV 76 (180)
T ss_dssp HHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHH
T ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchh
Confidence 3455666665 678899999999999999999987 358999999998 6432 47899999998763
Q ss_pred --------CCCCccEEEEechhhccChhh---------HHHHHHHHHhcCccCcEEEEEeec
Q 024096 98 --------KANKYDRIISCGMIEHVGHDY---------MEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 98 --------~~~~fD~V~~~~~~~~~~~~~---------~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++++||+|++..++++.+... ...+++++.++|+|||.+++..+.
T Consensus 77 ~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 77 MKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred hhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 347899999988887764321 158899999999999999987654
No 212
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.50 E-value=2e-12 Score=113.82 Aligned_cols=102 Identities=18% Similarity=0.252 Sum_probs=87.1
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-CCC--CCCccEEEE
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-LPK--ANKYDRIIS 107 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~~~--~~~fD~V~~ 107 (272)
..++.+|||+| |+|.++..+++. +..+|+++|+++.+++.|+++++.+|+. +++++++|+.+ ++. +++||+|++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 34678999999 999999999887 4479999999999999999999998886 89999999988 652 468999999
Q ss_pred echhhccChhhHHHHHHHHHhcCccCcEE-EE
Q 024096 108 CGMIEHVGHDYMEEFFGCCESLLATHGLL-VL 138 (272)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l-~i 138 (272)
+.++... ....+++++.++|||||++ ++
T Consensus 248 ~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~ 276 (373)
T 2qm3_A 248 DPPETLE---AIRAFVGRGIATLKGPRCAGYF 276 (373)
T ss_dssp CCCSSHH---HHHHHHHHHHHTBCSTTCEEEE
T ss_pred CCCCchH---HHHHHHHHHHHHcccCCeEEEE
Confidence 8766543 2478999999999999965 44
No 213
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.49 E-value=3e-13 Score=119.03 Aligned_cols=112 Identities=29% Similarity=0.283 Sum_probs=88.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANK 101 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~ 101 (272)
..++... ..++.+|||+|||+|.++..++.. ...+++|+|+|+.+++.|++++..+|+.+++++.++|+.+++ ++++
T Consensus 208 ~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~ 286 (373)
T 3tm4_A 208 NAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDS 286 (373)
T ss_dssp HHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSC
T ss_pred HHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCC
Confidence 3344444 678899999999999999999987 334999999999999999999999998778999999999988 5689
Q ss_pred ccEEEEechhhccC-----hhh-HHHHHHHHHhcCccCcEEEE
Q 024096 102 YDRIISCGMIEHVG-----HDY-MEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 102 fD~V~~~~~~~~~~-----~~~-~~~~l~~~~~~LkpgG~l~i 138 (272)
||+|+++..+.... .++ ...+++++.++| +|.+++
T Consensus 287 fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~ 327 (373)
T 3tm4_A 287 VDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVF 327 (373)
T ss_dssp EEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEE
T ss_pred cCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEE
Confidence 99999987644321 012 367888888888 444444
No 214
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.49 E-value=4.4e-14 Score=116.09 Aligned_cols=103 Identities=10% Similarity=0.139 Sum_probs=91.2
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechh
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMI 111 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~ 111 (272)
.+..+|||||||+|-++..++.. +..+++++|+++.+++.+++++..+|+ +..+.+.|....++.+.||+|++.-++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCCCCCcchHHHHHHH
Confidence 45779999999999999999888 788999999999999999999999987 479999998887778899999999999
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
+|+.++.....+ ++...|+|+|.++-
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 999655445667 89999999998874
No 215
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.49 E-value=1.7e-13 Score=124.03 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=94.8
Q ss_pred HHHcCCC--CCCEEEEECCCchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCC
Q 024096 27 IEKARVS--KGQEVLDIGCGWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KAN 100 (272)
Q Consensus 27 ~~~l~~~--~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~ 100 (272)
...+... ++.+|||+|||+|+.+..+++. . ..+|+++|+++.+++.++++++..|+. ++.++++|+.+++ .++
T Consensus 108 ~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~ 186 (479)
T 2frx_A 108 VAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPE 186 (479)
T ss_dssp HHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTT
T ss_pred HHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccc
Confidence 3455666 8999999999999999999987 2 479999999999999999999998885 7999999998875 457
Q ss_pred CccEEEEec------hhhccCh-------h-------hHHHHHHHHHhcCccCcEEEEEeecCC
Q 024096 101 KYDRIISCG------MIEHVGH-------D-------YMEEFFGCCESLLATHGLLVLQFISAP 144 (272)
Q Consensus 101 ~fD~V~~~~------~~~~~~~-------~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~ 144 (272)
.||+|++.. ++.+.++ + ....+++++.++|||||++++++.+..
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 899999842 2322221 1 135789999999999999999877653
No 216
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.48 E-value=3.9e-14 Score=123.80 Aligned_cols=108 Identities=19% Similarity=0.225 Sum_probs=85.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC------chHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCG------WGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD 92 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G------~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d 92 (272)
..++.+++.+.. ++.+||||||| +|+.+..+++. ++++|+|+|+|+.+. . ..++++++++|
T Consensus 204 ~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~--~~~rI~fv~GD 272 (419)
T 3sso_A 204 PHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V--DELRIRTIQGD 272 (419)
T ss_dssp HHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G--CBTTEEEEECC
T ss_pred HHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h--cCCCcEEEEec
Confidence 345556666653 46899999999 77777777765 688999999999872 1 12589999999
Q ss_pred cCCCC-C------CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 93 YRQLP-K------ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 93 ~~~~~-~------~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+.+++ . +++||+|++..+ +++ .+....+++++++|||||++++.++.
T Consensus 273 a~dlpf~~~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 273 QNDAEFLDRIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TTCHHHHHHHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccccchhhhhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99876 3 589999998754 555 56789999999999999999998765
No 217
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.48 E-value=9e-14 Score=109.37 Aligned_cols=122 Identities=19% Similarity=0.159 Sum_probs=91.7
Q ss_pred HcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC----CCCccE
Q 024096 29 KARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----ANKYDR 104 (272)
Q Consensus 29 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----~~~fD~ 104 (272)
.+++++|.+|||+|||. +++|+|+.+++.|+++.. .++++.++|+.+++. +++||+
T Consensus 7 ~~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred ccCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeE
Confidence 45678999999999986 239999999999998753 258999999988763 578999
Q ss_pred EEEechhhcc-ChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCC
Q 024096 105 IISCGMIEHV-GHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSG 183 (272)
Q Consensus 105 V~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~G 183 (272)
|++..+++|+ ++ ...++++++++|||||++++......... . .....+.+++.+.+ +++|
T Consensus 67 V~~~~~l~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~--------~--------~~~~~~~~~~~~~l-~~aG 127 (176)
T 2ld4_A 67 ILSGLVPGSTTLH--SAEILAEIARILRPGGCLFLKEPVETAVD--------N--------NSKVKTASKLCSAL-TLSG 127 (176)
T ss_dssp EEECCSTTCCCCC--CHHHHHHHHHHEEEEEEEEEEEEEESSSC--------S--------SSSSCCHHHHHHHH-HHTT
T ss_pred EEECChhhhcccC--HHHHHHHHHHHCCCCEEEEEEcccccccc--------c--------ccccCCHHHHHHHH-HHCC
Confidence 9999999998 54 48999999999999999999654321100 0 11223567777554 5699
Q ss_pred cEEEEEEe
Q 024096 184 LCVEHLEN 191 (272)
Q Consensus 184 f~v~~~~~ 191 (272)
| +. +..
T Consensus 128 f-i~-~~~ 133 (176)
T 2ld4_A 128 L-VE-VKE 133 (176)
T ss_dssp C-EE-EEE
T ss_pred C-cE-eec
Confidence 9 55 444
No 218
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.48 E-value=2.9e-13 Score=108.69 Aligned_cols=92 Identities=20% Similarity=0.215 Sum_probs=74.2
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEech
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGM 110 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~ 110 (272)
...++.+|||+|||+|.++..+++....+++|+|+++.+++.+++++. +++++++|+.+++ ++||+|+++.+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~~~D~v~~~~p 119 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--GKYDTWIMNPP 119 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC--CCEEEEEECCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC--CCeeEEEECCC
Confidence 556788999999999999999998733489999999999999998853 6899999999876 78999999999
Q ss_pred hhccChhhHHHHHHHHHhcC
Q 024096 111 IEHVGHDYMEEFFGCCESLL 130 (272)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~~L 130 (272)
++|........+++++.+.+
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp C-------CHHHHHHHHHHE
T ss_pred chhccCchhHHHHHHHHHhc
Confidence 99986433457888888887
No 219
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.47 E-value=2.1e-15 Score=125.38 Aligned_cols=112 Identities=20% Similarity=0.326 Sum_probs=86.3
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C-C
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K-A 99 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~-~ 99 (272)
.++.+++.+.+.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++.. ..++++++++|+.+++ + +
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccC
Confidence 4577888888889999999999999999999987 6899999999999999887764 1258999999999987 3 3
Q ss_pred CCccEEEEechhhccChhhH----------HHHH----HHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGMIEHVGHDYM----------EEFF----GCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~----------~~~l----~~~~~~LkpgG~l~i~ 139 (272)
++| .|+++..... ..... ...+ +.+.++|+|||++.+.
T Consensus 93 ~~f-~vv~n~Py~~-~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 93 QRY-KIVGNIPYHL-STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp SEE-EEEEECCSSS-CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred CCc-EEEEeCCccc-cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 578 6777643221 11111 2233 6688999999998763
No 220
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.47 E-value=4.7e-13 Score=120.00 Aligned_cols=118 Identities=18% Similarity=0.211 Sum_probs=95.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KA 99 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~ 99 (272)
..+...+...++.+|||+|||+|..+..+++. ++.+++++|+++.+++.+++++...|+ ++.++++|+.+.+ ++
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~ 313 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGE 313 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTT
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhccc
Confidence 44556667889999999999999999999998 457999999999999999999998887 4799999998876 34
Q ss_pred CCccEEEEec------hhhccCh-------h-------hHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 100 NKYDRIISCG------MIEHVGH-------D-------YMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 100 ~~fD~V~~~~------~~~~~~~-------~-------~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
++||+|++.. ++.+.++ + ....+++++.++|||||++++++.+.
T Consensus 314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 6899999743 3333322 1 12578999999999999999987654
No 221
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.47 E-value=2e-13 Score=121.20 Aligned_cols=110 Identities=19% Similarity=0.118 Sum_probs=91.2
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC-CCCeEEEEcccCCCC-----CCCCccEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGL-QDHIRFYLCDYRQLP-----KANKYDRII 106 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~-~~~i~~~~~d~~~~~-----~~~~fD~V~ 106 (272)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.|+++++.+++ .++++++++|+.+.. ..++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 47889999999999999999986345999999999999999999999998 668999999987754 146899999
Q ss_pred EechhhccC-------hhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 107 SCGMIEHVG-------HDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 107 ~~~~~~~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+........ .+....++.++.+.|+|||.+++++..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 975432110 145678999999999999999986544
No 222
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=1.7e-13 Score=117.12 Aligned_cols=106 Identities=20% Similarity=0.197 Sum_probs=84.9
Q ss_pred CEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---CCCCccEEEEechh
Q 024096 36 QEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---KANKYDRIISCGMI 111 (272)
Q Consensus 36 ~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~~~~fD~V~~~~~~ 111 (272)
.+|||||||+|.++..+++. ++.+++++|+++.+++.|++++.... .++++++++|..+.. ++++||+|++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 49999999999999999995 78899999999999999999875432 358999999987653 35789999996433
Q ss_pred hccChhh--HHHHHHHHHhcCccCcEEEEEeec
Q 024096 112 EHVGHDY--MEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 112 ~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
....... ...++++++++|+|||++++....
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 2211111 268999999999999999987654
No 223
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.47 E-value=1.7e-13 Score=117.23 Aligned_cols=112 Identities=18% Similarity=0.223 Sum_probs=85.9
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCCeEEEEcccCCC-C-CCCCccE
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVRE--AGL-QDHIRFYLCDYRQL-P-KANKYDR 104 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~--~g~-~~~i~~~~~d~~~~-~-~~~~fD~ 104 (272)
....+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++.. .++ .++++++.+|+.+. + .+++||+
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 92 SHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred hCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 3456789999999999999999987 457999999999999999998765 333 36899999998763 2 4578999
Q ss_pred EEEechhhccChh--hHHHHHHHHHhcCccCcEEEEEeec
Q 024096 105 IISCGMIEHVGHD--YMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 105 V~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|++....+..+.. ....+++++.++|+|||++++....
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 9996543321111 1257899999999999999986543
No 224
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.46 E-value=1.3e-13 Score=122.32 Aligned_cols=110 Identities=20% Similarity=0.153 Sum_probs=91.3
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRIIS 107 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~~ 107 (272)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.+++++..+++.++++++++|+.+.. ..++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 47889999999999999999986334999999999999999999999998668999999987754 2578999999
Q ss_pred echhhccCh-------hhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 108 CGMIEHVGH-------DYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 108 ~~~~~~~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
.......+. +....++.++.++|+|||.+++.+..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 754322211 44578899999999999999886554
No 225
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.46 E-value=1.9e-13 Score=118.36 Aligned_cols=109 Identities=16% Similarity=0.185 Sum_probs=86.2
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCCeEEEEcccCCCC---CCCCcc
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREA--GL-QDHIRFYLCDYRQLP---KANKYD 103 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~~---~~~~fD 103 (272)
....+.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++... ++ .++++++++|+.+.. ++++||
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 3456789999999999999999987 5679999999999999999987652 33 358999999987642 347899
Q ss_pred EEEEechhhccChhh--HHHHHHHHHhcCccCcEEEEE
Q 024096 104 RIISCGMIEHVGHDY--MEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|++......-+.+. ...+++++.++|+|||++++.
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999965421111111 368999999999999999985
No 226
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.46 E-value=5.4e-15 Score=121.77 Aligned_cols=107 Identities=11% Similarity=0.134 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCC-CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEE-EcccCCCC--
Q 024096 22 KVSVLIEKARVS-KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFY-LCDYRQLP-- 97 (272)
Q Consensus 22 ~~~~l~~~l~~~-~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~-~~d~~~~~-- 97 (272)
++..+++.+.+. ++.+|||+|||+|.++..+++....+|+|+|+|+.|++.++++.. ++... ..++....
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~ 97 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLA 97 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGG
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHh
Confidence 456777777754 467999999999999999999732599999999999998776432 22211 11221111
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|.+.+..++.++ ..+++++.++|||||++++.
T Consensus 98 ~~~~~~~d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 98 DFEQGRPSFTSIDVSFISL-----DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp GCCSCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred HcCcCCCCEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEE
Confidence 11135666666555555 57999999999999999984
No 227
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.46 E-value=4.7e-13 Score=116.60 Aligned_cols=116 Identities=17% Similarity=0.142 Sum_probs=94.2
Q ss_pred HHHHHHc-CCCCCCEEEEECCCchHHHHHHHHc-cC-----CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC
Q 024096 24 SVLIEKA-RVSKGQEVLDIGCGWGTLAIEIVKQ-TG-----CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL 96 (272)
Q Consensus 24 ~~l~~~l-~~~~~~~vLDiG~G~G~~~~~l~~~-~~-----~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 96 (272)
..+++.+ ...++.+|||+|||+|.++..+++. .. .+++|+|+++.+++.|+.++...|+ ++.++++|....
T Consensus 119 ~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~ 196 (344)
T 2f8l_A 119 AYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLAN 196 (344)
T ss_dssp HHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSC
T ss_pred HHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCc
Confidence 4445444 4456789999999999999999887 32 7899999999999999999988776 689999998775
Q ss_pred CCCCCccEEEEechhhccChhhH----------------HHHHHHHHhcCccCcEEEEEee
Q 024096 97 PKANKYDRIISCGMIEHVGHDYM----------------EEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 97 ~~~~~fD~V~~~~~~~~~~~~~~----------------~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
...++||+|+++..+.+++.++. ..++.++.+.|+|||++++..+
T Consensus 197 ~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 197 LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 55678999999998877643322 2589999999999999998654
No 228
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.46 E-value=1.8e-12 Score=116.23 Aligned_cols=114 Identities=18% Similarity=0.262 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC
Q 024096 18 GQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP 97 (272)
Q Consensus 18 aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~ 97 (272)
.....++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.+++. +++++++|+.+..
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l 347 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHh
Confidence 34455677888888888899999999999999999987 789999999999999999999999885 8999999998732
Q ss_pred -----CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -----KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -----~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.+++||+|+++..-... ..+++.+.+ ++|++.++++
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEE
T ss_pred hhhhhhcCCCCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEE
Confidence 34689999997655443 245555543 6899888875
No 229
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.46 E-value=3.6e-13 Score=109.66 Aligned_cols=101 Identities=20% Similarity=0.159 Sum_probs=86.8
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
.++.+|||+|||+|.++..+. ++.+++++|+++.+++.+++++..++. +..+.++|....++.++||+|++.-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCCCCcchHHHHHHHH
Confidence 567899999999999999877 688999999999999999999988874 6899999999888777999999999999
Q ss_pred ccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 113 HVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
|+.+......+ ++.+.|+++|.++-
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEE
Confidence 98655445555 78889999977653
No 230
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.45 E-value=6.6e-14 Score=120.22 Aligned_cols=107 Identities=22% Similarity=0.311 Sum_probs=82.6
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCCeEEEEcccCCC-C-CCCCccEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREA--GL-QDHIRFYLCDYRQL-P-KANKYDRII 106 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~-~-~~~~fD~V~ 106 (272)
..+.+|||||||+|..+..+++. +..+++++|+++.+++.|++++... ++ .++++++.+|+.+. + .+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45679999999999999999987 5689999999999999999987543 33 45899999998764 2 457899999
Q ss_pred EechhhccCh-hhH--HHHHHHHHhcCccCcEEEEEe
Q 024096 107 SCGMIEHVGH-DYM--EEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 107 ~~~~~~~~~~-~~~--~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+... .++.. +.. ..+++++.++|+|||++++..
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8653 33321 222 689999999999999999864
No 231
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.45 E-value=2.5e-13 Score=115.20 Aligned_cols=110 Identities=18% Similarity=0.225 Sum_probs=87.3
Q ss_pred CCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcC--C-CCCeEEEEcccCCCC--CCCCccE
Q 024096 31 RVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAG--L-QDHIRFYLCDYRQLP--KANKYDR 104 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g--~-~~~i~~~~~d~~~~~--~~~~fD~ 104 (272)
...++.+|||+|||+|..+..+++. +..+++++|+++.+++.+++++...+ + .++++++.+|+.+.. .+++||+
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred cCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 3456789999999999999999987 56799999999999999999875432 1 358999999987643 3578999
Q ss_pred EEEechhhccChhhH--HHHHHHHHhcCccCcEEEEEe
Q 024096 105 IISCGMIEHVGHDYM--EEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 105 V~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~ 140 (272)
|++.....+.+.... ..+++++.+.|+|||++++..
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 999654332222222 689999999999999999864
No 232
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.45 E-value=1.8e-13 Score=117.69 Aligned_cols=109 Identities=21% Similarity=0.227 Sum_probs=87.4
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH--cC-C-CCCeEEEEcccCCC-C-CCCCccEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVRE--AG-L-QDHIRFYLCDYRQL-P-KANKYDRI 105 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~--~g-~-~~~i~~~~~d~~~~-~-~~~~fD~V 105 (272)
..+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++.. .+ + .++++++.+|+.+. + .+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999999987 567999999999999999998764 22 2 35899999998774 3 45789999
Q ss_pred EEechhhc---cChhh--HHHHHHHHHhcCccCcEEEEEee
Q 024096 106 ISCGMIEH---VGHDY--MEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 106 ~~~~~~~~---~~~~~--~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++....++ -+... ...+++++.++|||||++++...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99865543 11111 36899999999999999998643
No 233
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.45 E-value=9.9e-14 Score=119.63 Aligned_cols=107 Identities=21% Similarity=0.334 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCCeEEEEcccCCCC--CCCCccEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVRE--AGL-QDHIRFYLCDYRQLP--KANKYDRII 106 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~--~g~-~~~i~~~~~d~~~~~--~~~~fD~V~ 106 (272)
..+.+|||+|||+|.++..+++. +..+++++|+++.+++.+++++.. .++ .++++++++|+.+.. .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45689999999999999999987 568999999999999999998764 223 358999999987642 457899999
Q ss_pred EechhhccC-hhhH--HHHHHHHHhcCccCcEEEEEe
Q 024096 107 SCGMIEHVG-HDYM--EEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 107 ~~~~~~~~~-~~~~--~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+... .++. .... ..+++++.+.|+|||++++..
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9753 2221 1222 689999999999999999864
No 234
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.44 E-value=2.5e-13 Score=119.97 Aligned_cols=107 Identities=21% Similarity=0.209 Sum_probs=89.8
Q ss_pred CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEEEe
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRIISC 108 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~~~ 108 (272)
++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.++++++.+++. +++++++|+.+.. ..++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 7789999999999999999997 779999999999999999999999986 4999999987754 15789999996
Q ss_pred chhhccCh-------hhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 109 GMIEHVGH-------DYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 109 ~~~~~~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
......+. +....++.++.++|+|||.+++++..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 54322111 44577999999999999999987554
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.44 E-value=3.8e-13 Score=107.42 Aligned_cols=110 Identities=24% Similarity=0.326 Sum_probs=83.2
Q ss_pred HHHHHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 20 MRKVSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 20 ~~~~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
..++..+.+++. +.++.+|||+|||+|.++..+++. +.+|+|+|+++.. .. .+++++++|+.+.+
T Consensus 10 ~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~ 76 (191)
T 3dou_A 10 AFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETI 76 (191)
T ss_dssp HHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSH
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cC-CCeEEEEccccCHHH
Confidence 345566777766 468899999999999999999997 8899999999741 22 47999999998865
Q ss_pred C-------C----CCccEEEEechhhccCh---------hhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 98 K-------A----NKYDRIISCGMIEHVGH---------DYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 98 ~-------~----~~fD~V~~~~~~~~~~~---------~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
. . ++||+|++.......+. +....+++.+.++|||||.+++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 77 FDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 1 1 48999999753322111 12356788899999999999986554
No 236
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.44 E-value=5e-13 Score=118.10 Aligned_cols=107 Identities=17% Similarity=0.130 Sum_probs=86.0
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccEEEEech
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDRIISCGM 110 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~V~~~~~ 110 (272)
.+|.+|||+|||+|.++..+++. +++|+++|+|+.+++.++++++.+++.. .+.++|+.+.. ..+.||+|++...
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEECCC
Confidence 46899999999999999999986 7779999999999999999999998853 56699987753 2344999999765
Q ss_pred hhccCh-------hhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 111 IEHVGH-------DYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 111 ~~~~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
...-+. +....+++.+.++|+|||.+++.+..
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 322111 34468899999999999999975544
No 237
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.44 E-value=1.2e-13 Score=117.09 Aligned_cols=108 Identities=20% Similarity=0.227 Sum_probs=83.7
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc--CC--------CCCeEEEEcccCCCC-CCCC
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA--GL--------QDHIRFYLCDYRQLP-KANK 101 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~--g~--------~~~i~~~~~d~~~~~-~~~~ 101 (272)
..+.+|||+|||+|.++..+++.+..+++++|+++.+++.|++++ .. ++ .++++++.+|+.+.. .+++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 456899999999999999999874569999999999999999987 33 22 358999999976532 2478
Q ss_pred ccEEEEechhhccChhh--HHHHHHHHHhcCccCcEEEEEee
Q 024096 102 YDRIISCGMIEHVGHDY--MEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
||+|++....+.-+.+. ...+++++.++|+|||++++...
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 99999976532211122 26789999999999999998643
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.43 E-value=5.8e-13 Score=125.92 Aligned_cols=107 Identities=18% Similarity=0.170 Sum_probs=90.2
Q ss_pred CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEcccCCCC--CCCCccEEEEech
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQ-DHIRFYLCDYRQLP--KANKYDRIISCGM 110 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~~--~~~~fD~V~~~~~ 110 (272)
+|.+|||+|||+|.++..++.....+|+++|+|+.+++.++++++.+++. ++++++++|+.+.. ..++||+|++...
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 68899999999999999999863347999999999999999999999986 58999999988743 4578999999764
Q ss_pred h-----------hccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 111 I-----------EHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 111 ~-----------~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
. .+. ++...+++.+.++|+|||.++++...
T Consensus 619 ~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2 222 45678899999999999999986543
No 239
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.43 E-value=3e-14 Score=120.20 Aligned_cols=116 Identities=14% Similarity=0.120 Sum_probs=83.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHH-HcCCCCCeEEE--EcccCCCCC
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVR-EAGLQDHIRFY--LCDYRQLPK 98 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~-~~g~~~~i~~~--~~d~~~~~~ 98 (272)
++..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+++ +...+++... ......++.++ ++|+.+++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~- 145 (276)
T 2wa2_A 70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME- 145 (276)
T ss_dssp HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-
T ss_pred HHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-
Confidence 3566666655678999999999999999999987 6899999998 4322221100 00111268899 99999887
Q ss_pred CCCccEEEEechhhccChhh---H--HHHHHHHHhcCccCc--EEEEEeec
Q 024096 99 ANKYDRIISCGMIEHVGHDY---M--EEFFGCCESLLATHG--LLVLQFIS 142 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~---~--~~~l~~~~~~LkpgG--~l~i~~~~ 142 (272)
+++||+|++..+ ++.+... . ..+++.+.++||||| .+++..+.
T Consensus 146 ~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999876 4432211 1 137899999999999 99886554
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.43 E-value=5.6e-13 Score=115.74 Aligned_cols=100 Identities=20% Similarity=0.236 Sum_probs=87.7
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
.++.+|||+|||+|.++.. ++ .+.+|+++|+|+.+++.++++++.+++.++++++++|+.+.. ++||+|++.....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKF 269 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHh
Confidence 4788999999999999999 87 478999999999999999999999998778999999998877 8899999964322
Q ss_pred ccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 113 HVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
. ..+++.+.++|+|||.+++.++.
T Consensus 270 ~------~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 270 A------HKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp G------GGGHHHHHHHEEEEEEEEEEEEE
T ss_pred H------HHHHHHHHHHcCCCCEEEEEEee
Confidence 1 37888899999999999987665
No 241
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.42 E-value=3.7e-14 Score=118.95 Aligned_cols=117 Identities=15% Similarity=0.104 Sum_probs=83.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHH-HHcCCCCCeEEE--EcccCCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKV-REAGLQDHIRFY--LCDYRQLP 97 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~-~~~g~~~~i~~~--~~d~~~~~ 97 (272)
.++..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+++ +...+++.. .......++.++ ++|+.+++
T Consensus 61 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 61 AKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp HHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 33566667655678999999999999999999986 6899999998 432221110 000011168889 99999887
Q ss_pred CCCCccEEEEechhhccChhh---H--HHHHHHHHhcCccCc--EEEEEeec
Q 024096 98 KANKYDRIISCGMIEHVGHDY---M--EEFFGCCESLLATHG--LLVLQFIS 142 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~---~--~~~l~~~~~~LkpgG--~l~i~~~~ 142 (272)
+++||+|++..+ ++.+... . ..+++.+.++||||| .+++..+.
T Consensus 138 -~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 -VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 578999999876 4433221 1 137899999999999 99886554
No 242
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.42 E-value=2.2e-13 Score=116.21 Aligned_cols=108 Identities=20% Similarity=0.287 Sum_probs=83.2
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCCeEEEEcccCCC-C-CCCCccEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVRE--AGL-QDHIRFYLCDYRQL-P-KANKYDRII 106 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~--~g~-~~~i~~~~~d~~~~-~-~~~~fD~V~ 106 (272)
..+.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++++.. .++ .++++++++|+.+. + .+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 35689999999999999999987 568999999999999999998754 233 35899999997663 3 457899999
Q ss_pred EechhhccChh---hHHHHHHHHHhcCccCcEEEEEe
Q 024096 107 SCGMIEHVGHD---YMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 107 ~~~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+...-.+.... ....+++++.+.|+|||++++..
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 86432212110 12689999999999999999863
No 243
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.42 E-value=2.1e-13 Score=115.07 Aligned_cols=108 Identities=20% Similarity=0.236 Sum_probs=85.2
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCCeEEEEcccCCC-C-CCCCccEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREA--GL-QDHIRFYLCDYRQL-P-KANKYDRII 106 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~-~-~~~~fD~V~ 106 (272)
..+.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. + .+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35689999999999999999987 4579999999999999999987542 33 35899999998763 2 357899999
Q ss_pred EechhhccChh--hHHHHHHHHHhcCccCcEEEEEe
Q 024096 107 SCGMIEHVGHD--YMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 107 ~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+.......+.. ....+++++.+.|+|||++++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 96543222111 12579999999999999999863
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.41 E-value=1.3e-12 Score=111.55 Aligned_cols=90 Identities=19% Similarity=0.278 Sum_probs=74.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 100 (272)
..++.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...++ ++++++++|+.+.+. .
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-P 105 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-C
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-c
Confidence 45677888888889999999999999999999986 78999999999999999999887776 589999999988774 4
Q ss_pred CccEEEEechhhc
Q 024096 101 KYDRIISCGMIEH 113 (272)
Q Consensus 101 ~fD~V~~~~~~~~ 113 (272)
+||+|+++...+.
T Consensus 106 ~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 106 KFDVCTANIPYKI 118 (299)
T ss_dssp CCSEEEEECCGGG
T ss_pred cCCEEEEcCCccc
Confidence 8999999766543
No 245
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.41 E-value=4.3e-12 Score=113.29 Aligned_cols=106 Identities=18% Similarity=0.250 Sum_probs=86.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCc
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKY 102 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~f 102 (272)
++.+.+ +.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..+++. ++++++|+.+..+. +|
T Consensus 282 ~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~-~f 354 (425)
T 2jjq_A 282 VRKVSE---LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVK-GF 354 (425)
T ss_dssp HHHHHH---HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCT-TC
T ss_pred HHHhhc---cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCcc-CC
Confidence 344444 467889999999999999999986 779999999999999999999988874 99999999987643 89
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
|+|++...-.... ..+++.+. .|+|+|.++++.
T Consensus 355 D~Vv~dPPr~g~~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 355 DTVIVDPPRAGLH----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp SEEEECCCTTCSC----HHHHHHHH-HHCCSEEEEEES
T ss_pred CEEEEcCCccchH----HHHHHHHH-hcCCCcEEEEEC
Confidence 9999976644332 24555554 489999999863
No 246
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.37 E-value=2.2e-12 Score=102.89 Aligned_cols=107 Identities=18% Similarity=0.170 Sum_probs=78.9
Q ss_pred HHHHHHcC-CCCCCEEEEECCCchHHHHHHHHc-cC---------CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEE-Ec
Q 024096 24 SVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQ-TG---------CKYTGITLSEEQLKYAEIKVREAGLQDHIRFY-LC 91 (272)
Q Consensus 24 ~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~-~~---------~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~-~~ 91 (272)
..+.+.+. +.++.+|||+|||+|.++..+++. +. .+|+|+|+++.. .. .+++++ .+
T Consensus 11 ~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~ 78 (196)
T 2nyu_A 11 LEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPA 78 (196)
T ss_dssp HHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSC
T ss_pred HHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEec
Confidence 33444444 578899999999999999999988 33 799999999831 12 368889 89
Q ss_pred ccCCCC---------CCCCccEEEEechhhccCh--hhH-------HHHHHHHHhcCccCcEEEEEeec
Q 024096 92 DYRQLP---------KANKYDRIISCGMIEHVGH--DYM-------EEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 92 d~~~~~---------~~~~fD~V~~~~~~~~~~~--~~~-------~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|+.+.+ ++++||+|++..+++.... .+. ..+++++.++|||||++++..+.
T Consensus 79 d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 79 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp CTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 976643 2358999999765443211 111 47899999999999999987553
No 247
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.36 E-value=5.4e-12 Score=111.33 Aligned_cols=118 Identities=21% Similarity=0.260 Sum_probs=96.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cC--------------------------------------CEEEE
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TG--------------------------------------CKYTG 62 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~--------------------------------------~~v~g 62 (272)
....++...+..++.+|||++||+|.+++.++.. .+ .+|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 3455777778888999999999999999988775 22 57999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhhc-cC-hhhHHHHHHHHHhcCcc--CcEEEE
Q 024096 63 ITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIEH-VG-HDYMEEFFGCCESLLAT--HGLLVL 138 (272)
Q Consensus 63 vd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~-~~-~~~~~~~l~~~~~~Lkp--gG~l~i 138 (272)
+|+++.+++.|++++..+|+.+++++.++|+.+++.+.+||+|+++..+.. ++ .++...+.+++.+.||+ |+.+++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 999999999999999999987789999999999886679999999887532 22 13456777777777776 888777
Q ss_pred E
Q 024096 139 Q 139 (272)
Q Consensus 139 ~ 139 (272)
.
T Consensus 343 i 343 (385)
T 3ldu_A 343 I 343 (385)
T ss_dssp E
T ss_pred E
Confidence 4
No 248
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.35 E-value=2e-12 Score=116.43 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=96.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--------------cCCEEEEEcCCHHHHHHHHHHHHHcCCCC-Ce
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--------------TGCKYTGITLSEEQLKYAEIKVREAGLQD-HI 86 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--------------~~~~v~gvd~s~~~~~~a~~~~~~~g~~~-~i 86 (272)
..+.+++.+...++.+|||.|||+|+++..+++. ...+++|+|+++.+++.|+.++...|+.. ++
T Consensus 159 v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~ 238 (445)
T 2okc_A 159 LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRS 238 (445)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCC
Confidence 3456667777778889999999999999888764 23679999999999999999998888743 67
Q ss_pred EEEEcccCCCCCCCCccEEEEechhhccChhh---------------HHHHHHHHHhcCccCcEEEEEee
Q 024096 87 RFYLCDYRQLPKANKYDRIISCGMIEHVGHDY---------------MEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 87 ~~~~~d~~~~~~~~~fD~V~~~~~~~~~~~~~---------------~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
.+.++|....+...+||+|+++..+.+..... ...++.++.+.|||||++++..+
T Consensus 239 ~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 239 PIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp SEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 89999988877556899999998877643211 13789999999999999988654
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.35 E-value=1.2e-11 Score=105.08 Aligned_cols=89 Identities=21% Similarity=0.254 Sum_probs=77.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K 98 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~ 98 (272)
...++.+++.+.+.++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++... ++++++++|+.+++ +
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCcc
Confidence 345678899999999999999999999999999997 789999999999999999998743 48999999999987 4
Q ss_pred CCCccEEEEechhh
Q 024096 99 ANKYDRIISCGMIE 112 (272)
Q Consensus 99 ~~~fD~V~~~~~~~ 112 (272)
+..||+|+++...+
T Consensus 112 ~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 112 KLDFNKVVANLPYQ 125 (295)
T ss_dssp GSCCSEEEEECCGG
T ss_pred cCCccEEEEeCccc
Confidence 56799999886544
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.35 E-value=7.3e-12 Score=110.71 Aligned_cols=118 Identities=15% Similarity=0.206 Sum_probs=95.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cC--------------------------------------CEEEE
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TG--------------------------------------CKYTG 62 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~--------------------------------------~~v~g 62 (272)
....++...+..++.+|||.+||+|.+++.++.. .+ .+|+|
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 3455777778888999999999999999888875 22 46999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhhc-cCh-hhHHHHHHHHHhcCcc--CcEEEE
Q 024096 63 ITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIEH-VGH-DYMEEFFGCCESLLAT--HGLLVL 138 (272)
Q Consensus 63 vd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~-~~~-~~~~~~l~~~~~~Lkp--gG~l~i 138 (272)
+|+++.+++.|++++..+|+.+++++.++|+.+++.+++||+|+++..+.. +++ ++...+.+.+.+.||+ ||.+++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 999999999999999999998789999999999886679999999976532 221 3455667777777766 888887
Q ss_pred E
Q 024096 139 Q 139 (272)
Q Consensus 139 ~ 139 (272)
.
T Consensus 349 i 349 (393)
T 3k0b_A 349 L 349 (393)
T ss_dssp E
T ss_pred E
Confidence 4
No 251
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.35 E-value=1.8e-11 Score=107.85 Aligned_cols=118 Identities=15% Similarity=0.194 Sum_probs=96.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cC--------------------------------------CEEEE
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TG--------------------------------------CKYTG 62 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~--------------------------------------~~v~g 62 (272)
....++......++..|||.+||+|.+++.++.. .+ .+++|
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 3455677778888999999999999999988865 22 46999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhhc-cC-hhhHHHHHHHHHhcCcc--CcEEEE
Q 024096 63 ITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIEH-VG-HDYMEEFFGCCESLLAT--HGLLVL 138 (272)
Q Consensus 63 vd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~-~~-~~~~~~~l~~~~~~Lkp--gG~l~i 138 (272)
+|+++.+++.|++++..+|+.+++++.++|+.+++...+||+|+++..+.. ++ .++...+.+.+.+.||+ ||.+++
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 999999999999999999998889999999999886579999999976532 22 24567777777777776 888887
Q ss_pred E
Q 024096 139 Q 139 (272)
Q Consensus 139 ~ 139 (272)
.
T Consensus 342 i 342 (384)
T 3ldg_A 342 L 342 (384)
T ss_dssp E
T ss_pred E
Confidence 4
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.33 E-value=4.9e-12 Score=104.89 Aligned_cols=86 Identities=20% Similarity=0.334 Sum_probs=70.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K 98 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~ 98 (272)
...++.+++.++..++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++.... ++++++++|+.+++ +
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCC
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcc
Confidence 455677888888888999999999999999999987 689999999999999999887532 48999999999987 3
Q ss_pred C-CCccEEEEech
Q 024096 99 A-NKYDRIISCGM 110 (272)
Q Consensus 99 ~-~~fD~V~~~~~ 110 (272)
+ ..| .|+++..
T Consensus 92 ~~~~~-~vv~nlP 103 (244)
T 1qam_A 92 KNQSY-KIFGNIP 103 (244)
T ss_dssp SSCCC-EEEEECC
T ss_pred cCCCe-EEEEeCC
Confidence 2 345 4565543
No 253
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.33 E-value=5.3e-11 Score=101.87 Aligned_cols=117 Identities=13% Similarity=0.050 Sum_probs=89.6
Q ss_pred HHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC---
Q 024096 25 VLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA--- 99 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~--- 99 (272)
.+...+...++.+|||+|||+|+.+..+++. ...+|+++|+++.+++.++++++..|+. +++++++|+.+++..
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~ 171 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPR 171 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGG
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccccc
Confidence 3445667889999999999999999999986 3479999999999999999999999884 799999999887622
Q ss_pred -CCccEEEEec------hhhccCh---------hh-------HHHHHHHHHhcCccCcEEEEEeecC
Q 024096 100 -NKYDRIISCG------MIEHVGH---------DY-------MEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 100 -~~fD~V~~~~------~~~~~~~---------~~-------~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
.+||.|++.. ++..-++ ++ ...+++.+.++++ ||+++.++.+.
T Consensus 172 ~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 5799999742 2221111 11 2356888888887 99998876653
No 254
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.31 E-value=5.4e-12 Score=112.63 Aligned_cols=111 Identities=19% Similarity=0.301 Sum_probs=87.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 99 (272)
..+.+++.+...++.+|||+|||+|.++..++++ .+.+++|+|+++.+++.| .++.++++|+.+....
T Consensus 27 l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~~ 96 (421)
T 2ih2_A 27 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEPG 96 (421)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCCS
T ss_pred HHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCcc
Confidence 3456777776656779999999999999999986 468999999999988776 3789999999887766
Q ss_pred CCccEEEEechhhcc----------Chhh-----------------HHHHHHHHHhcCccCcEEEEEeec
Q 024096 100 NKYDRIISCGMIEHV----------GHDY-----------------MEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~----------~~~~-----------------~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++||+|+++..+... .++. ...+++++.++|+|||++++..+.
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 799999997654322 1111 126789999999999999986554
No 255
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.30 E-value=4.2e-12 Score=106.31 Aligned_cols=98 Identities=14% Similarity=-0.025 Sum_probs=80.5
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCCeEEEEcccCCCCCCCCccEEEEec
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVRE--AGL-QDHIRFYLCDYRQLPKANKYDRIISCG 109 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~--~g~-~~~i~~~~~d~~~~~~~~~fD~V~~~~ 109 (272)
..+.+|||||||+|.++..+++. +.+++++|+++.+++.|++++.. .++ .++++++.+|..+.. ++||+|++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~ 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQ 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECC
Confidence 45689999999999999999887 48999999999999999886532 111 258999999998876 7899999862
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
++ +..+++++.+.|+|||.+++..
T Consensus 148 -----~d--p~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 -----EP--DIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----CC--CHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CC--hHHHHHHHHHhcCCCcEEEEEc
Confidence 21 2458999999999999999864
No 256
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.29 E-value=1.1e-12 Score=112.20 Aligned_cols=113 Identities=13% Similarity=0.158 Sum_probs=78.5
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcC----CHHHHHHHHHHHHHcCCCCCeEEEEc-ccCCCC
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITL----SEEQLKYAEIKVREAGLQDHIRFYLC-DYRQLP 97 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~----s~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~ 97 (272)
+..+.++..+.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. .+..+ .+++.++++ |+..++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 71 LRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP 145 (305)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC
T ss_pred HHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC
Confidence 344555544578899999999999999999987 58999998 554332111 01111 147899999 888775
Q ss_pred CCCCccEEEEechhh---ccChhh-HHHHHHHHHhcCccCcEEEEEee
Q 024096 98 KANKYDRIISCGMIE---HVGHDY-MEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~---~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
.++||+|+|..++. +..+.. ...+++.+.++|||||.+++..+
T Consensus 146 -~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 146 -PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp -CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred -cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 46899999976653 211111 11578889999999999988544
No 257
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.29 E-value=1.7e-11 Score=103.65 Aligned_cols=98 Identities=19% Similarity=0.219 Sum_probs=73.2
Q ss_pred HcCCCCCCEEEEECC------CchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEE-EEcccCCCCCC
Q 024096 29 KARVSKGQEVLDIGC------GWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRF-YLCDYRQLPKA 99 (272)
Q Consensus 29 ~l~~~~~~~vLDiG~------G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~-~~~d~~~~~~~ 99 (272)
.+.+.++.+|||+|| |+|. ..+++. + +.+|+|+|+++. + .++++ +++|+.+++..
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHTA 121 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCCS
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCcc
Confidence 346788999999999 5577 444544 3 589999999987 1 26788 99999987755
Q ss_pred CCccEEEEechhhc--------cC-hhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 100 NKYDRIISCGMIEH--------VG-HDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 100 ~~fD~V~~~~~~~~--------~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++||+|+++...+. .. ......+++++.++|||||++++..+.
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 78999999743221 10 123458999999999999999986543
No 258
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.26 E-value=5.2e-11 Score=104.64 Aligned_cols=110 Identities=8% Similarity=0.169 Sum_probs=85.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-- 97 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-- 97 (272)
...+..+++.+... +.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|+++++.+++ ++++++++|+.+..
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHHHH
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHHHH
Confidence 44567777777654 578999999999999999885 67999999999999999999999998 48999999987653
Q ss_pred -CC--------------CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 98 -KA--------------NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 98 -~~--------------~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
.. .+||+|++...-.. +.+++.+.|+++|++++.+
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g--------~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSG--------LDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTC--------CCHHHHHHHTTSSEEEEEE
T ss_pred HhhccccccccccccccCCCCEEEECcCccc--------cHHHHHHHHhCCCEEEEEE
Confidence 11 37999998754332 2234455566888887643
No 259
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.25 E-value=3.4e-11 Score=105.88 Aligned_cols=100 Identities=17% Similarity=0.079 Sum_probs=84.3
Q ss_pred CCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc---------------CCCCCeEEEEcccCCCC
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREA---------------GLQDHIRFYLCDYRQLP 97 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~---------------g~~~~i~~~~~d~~~~~ 97 (272)
++.+|||+|||+|..+..++++ ++.+|+++|+++..++.+++|++.+ ++. +++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 6789999999999999999998 5679999999999999999999998 774 4999999987764
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
..+.||+|+... ... ...+++.+.+.|||||.++++.
T Consensus 126 ~~~~~~fD~I~lDP-~~~-----~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDP-FGS-----PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECC-SSC-----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC-CCC-----HHHHHHHHHHhcCCCCEEEEEe
Confidence 246899999754 221 2578888999999999888854
No 260
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.24 E-value=1.5e-11 Score=108.29 Aligned_cols=102 Identities=12% Similarity=0.074 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCC-eEEEEcccCCCCC---CCCccEEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TG-CKYTGITLSEEQLKYAEIKVREAGLQDH-IRFYLCDYRQLPK---ANKYDRII 106 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~-~~v~gvd~s~~~~~~a~~~~~~~g~~~~-i~~~~~d~~~~~~---~~~fD~V~ 106 (272)
.++.+|||++||+|.+++.++++ .+ .+|+++|+++..++.+++|++.+++.++ ++++++|+.+... .+.||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46889999999999999999986 35 5899999999999999999999999766 9999999865421 35799999
Q ss_pred EechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+.. . .. ...+++.+.+.|+|||.++++.
T Consensus 131 lDP-~-g~----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F-GT----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S-SC----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C-cC----HHHHHHHHHHHhCCCCEEEEEe
Confidence 876 1 11 2468888999999999888865
No 261
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.23 E-value=7.9e-09 Score=90.26 Aligned_cols=219 Identities=10% Similarity=0.097 Sum_probs=123.5
Q ss_pred HHHHHHHHHHcCCCC-----CCEEEEECCCchHHHHHHHHc----------------cCCEEEEEcCCHHHHHHHHHHHH
Q 024096 20 MRKVSVLIEKARVSK-----GQEVLDIGCGWGTLAIEIVKQ----------------TGCKYTGITLSEEQLKYAEIKVR 78 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~-----~~~vLDiG~G~G~~~~~l~~~----------------~~~~v~gvd~s~~~~~~a~~~~~ 78 (272)
...+...++.+...+ ..+|+|+|||+|.++..++.. +..+|...|+-.......=+.+.
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 444555666666543 579999999999999887321 34677788875543322211111
Q ss_pred Hc-----------CC--CC-CeEEEEcccCCCC-CCCCccEEEEechhhccCh---------------------------
Q 024096 79 EA-----------GL--QD-HIRFYLCDYRQLP-KANKYDRIISCGMIEHVGH--------------------------- 116 (272)
Q Consensus 79 ~~-----------g~--~~-~i~~~~~d~~~~~-~~~~fD~V~~~~~~~~~~~--------------------------- 116 (272)
.. +. .. -+..+.+.+-.-. +++++|+|+|+.++|++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v 192 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKT 192 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHH
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHH
Confidence 10 00 00 1222333333333 6799999999999999851
Q ss_pred ---------hhHHHHHHHHHhcCccCcEEEEEeecCCCCcccc-----------ccC------cc-----hhhhhcccCC
Q 024096 117 ---------DYMEEFFGCCESLLATHGLLVLQFISAPDQCYDE-----------YRL------SP-----GFIKEYIFPG 165 (272)
Q Consensus 117 ---------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------~~~------~~-----~~~~~~~~p~ 165 (272)
+|+..+++..++.|+|||+++++....++..... +.. .. ..+.....|
T Consensus 193 ~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P- 271 (374)
T 3b5i_A 193 TTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIP- 271 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCcc-
Confidence 2566789999999999999999887765431100 000 00 001111112
Q ss_pred CCCCCHHHHHHHhhcCCCcEEEEEEecCccH----------HHHHHHHHHHHHhhHHHHHhccCChHHHH-HHHHHHHHH
Q 024096 166 GCLPSLGRVTSAMTSSSGLCVEHLENIGIHY----------YQTLRCWRKNFMGKQSEILALGFNEKFIR-TWEYYFDYC 234 (272)
Q Consensus 166 ~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~w~~~~~~~ 234 (272)
.+.|+.+++...+.++.||.+..++.+...+ ...-..+...+.+..+-+....|++.... ++..|....
T Consensus 272 ~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~~~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~ 351 (374)
T 3b5i_A 272 VYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDDASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRA 351 (374)
T ss_dssp BCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTCHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccchhHHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHH
Confidence 2458899998777657999998877653110 11112222222222333344457765544 366665555
Q ss_pred HHHHh
Q 024096 235 AASFK 239 (272)
Q Consensus 235 ~~~f~ 239 (272)
+....
T Consensus 352 ~~~~~ 356 (374)
T 3b5i_A 352 TSHAK 356 (374)
T ss_dssp HHTCH
T ss_pred HHhHH
Confidence 55444
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=9.6e-11 Score=97.53 Aligned_cols=86 Identities=14% Similarity=0.220 Sum_probs=72.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C-
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K- 98 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~- 98 (272)
..++.+++.+++.++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .++++++++|+.+++ +
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHH
Confidence 45677889999999999999999999999999987 68999999999999999998764 258999999999987 2
Q ss_pred ---CCCccEEEEechh
Q 024096 99 ---ANKYDRIISCGMI 111 (272)
Q Consensus 99 ---~~~fD~V~~~~~~ 111 (272)
+++|| |+++...
T Consensus 92 ~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 92 VKTDKPLR-VVGNLPY 106 (255)
T ss_dssp SCCSSCEE-EEEECCH
T ss_pred hccCCCeE-EEecCCc
Confidence 34688 6666543
No 263
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.19 E-value=2.1e-11 Score=101.79 Aligned_cols=88 Identities=13% Similarity=0.104 Sum_probs=71.2
Q ss_pred HHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCH-------HHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 26 LIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSE-------EQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~-------~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
+.+.+...++.+|||+|||+|..+..+++. +++|+++|+++ .+++.++++++.+++.++++++++|+.+..
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP 153 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH
Confidence 344445567789999999999999999996 78999999999 999999998887776557999999998753
Q ss_pred --CC--CCccEEEEechhhcc
Q 024096 98 --KA--NKYDRIISCGMIEHV 114 (272)
Q Consensus 98 --~~--~~fD~V~~~~~~~~~ 114 (272)
++ ++||+|++..++.+.
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHHHHHCCCSEEEECCCC---
T ss_pred hhhccCCCccEEEECCCCCCc
Confidence 22 689999998776653
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.18 E-value=1.3e-10 Score=97.43 Aligned_cols=87 Identities=18% Similarity=0.231 Sum_probs=74.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K 98 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~ 98 (272)
...++.+++.+++.++ +|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .+++++++|+.+.+ +
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGG
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChh
Confidence 3456788899999999 9999999999999999997 68999999999999999988752 48999999999887 2
Q ss_pred C-CCccEEEEechhh
Q 024096 99 A-NKYDRIISCGMIE 112 (272)
Q Consensus 99 ~-~~fD~V~~~~~~~ 112 (272)
+ ..+|.|+++...+
T Consensus 107 ~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 107 EVPQGSLLVANLPYH 121 (271)
T ss_dssp GSCTTEEEEEEECSS
T ss_pred hccCccEEEecCccc
Confidence 2 3689999886644
No 265
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.16 E-value=1.5e-10 Score=107.26 Aligned_cols=103 Identities=16% Similarity=0.170 Sum_probs=82.8
Q ss_pred CCCEEEEECCCchHHHHHHHH---ccCC--EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEe
Q 024096 34 KGQEVLDIGCGWGTLAIEIVK---QTGC--KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISC 108 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~---~~~~--~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~ 108 (272)
.+..|||+|||+|.++...++ +.+. +|++||.|+ +...+++..+.+++.++|+++++|++++..++++|+|+|.
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEE
Confidence 346899999999998544433 3333 789999997 6778888899999999999999999999877899999997
Q ss_pred chhhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 109 GMIEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 109 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
.+-.....+.....+....+.|||||.++
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 65444444555677888889999999875
No 266
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.15 E-value=3.7e-10 Score=90.23 Aligned_cols=113 Identities=9% Similarity=0.074 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC--CCCeEEEEcc
Q 024096 15 LEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGL--QDHIRFYLCD 92 (272)
Q Consensus 15 l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~--~~~i~~~~~d 92 (272)
+...+.+.+...+ .+..+|||+||| ..+.++++..+.+|+.+|.+++..+.++++++..|+ .++++++.+|
T Consensus 16 v~~~~~~~L~~~l-----~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gd 88 (202)
T 3cvo_A 16 MPPAEAEALRMAY-----EEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTD 88 (202)
T ss_dssp SCHHHHHHHHHHH-----HHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECC
T ss_pred CCHHHHHHHHHHh-----hCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 3344555444422 246799999985 677888875578999999999999999999999998 7899999999
Q ss_pred cCCC---------------C----------CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEee
Q 024096 93 YRQL---------------P----------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 93 ~~~~---------------~----------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
+.+. + ..++||+|++..-. ....+..+.+.|+|||++++.++
T Consensus 89 a~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 89 IGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp CSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEEEETTG
T ss_pred chhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEEEEeCC
Confidence 6542 1 23689999997521 13566667799999999987443
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.14 E-value=6e-11 Score=101.03 Aligned_cols=86 Identities=29% Similarity=0.432 Sum_probs=74.2
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---C
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---K 98 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~ 98 (272)
++.+++.+.+.++.+|||+|||+|..+..+++. ++.+|+|+|+|+.+++.|++++...+ ++++++++|+.+++ .
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHH
Confidence 456777788889999999999999999999998 56899999999999999999988776 58999999998875 1
Q ss_pred ---CCCccEEEEech
Q 024096 99 ---ANKYDRIISCGM 110 (272)
Q Consensus 99 ---~~~fD~V~~~~~ 110 (272)
..+||.|++...
T Consensus 93 ~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 93 TLGIEKVDGILMDLG 107 (301)
T ss_dssp HTTCSCEEEEEEECS
T ss_pred hcCCCCCCEEEEcCc
Confidence 158999998654
No 268
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.11 E-value=1.2e-10 Score=100.66 Aligned_cols=110 Identities=21% Similarity=0.196 Sum_probs=81.9
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC---CC----CCeEEEEcccCCCC-----CCC
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAG---LQ----DHIRFYLCDYRQLP-----KAN 100 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g---~~----~~i~~~~~d~~~~~-----~~~ 100 (272)
..+.+||+||||.|.++..+++++..+|+++|+++.+++.|++++...+ +. ++++++.+|+.+.. ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 3568999999999999999998855799999999999999999865321 22 27999999987754 247
Q ss_pred CccEEEEechh-hc--cCh-hhHHHHHHHH----HhcCccCcEEEEEeec
Q 024096 101 KYDRIISCGMI-EH--VGH-DYMEEFFGCC----ESLLATHGLLVLQFIS 142 (272)
Q Consensus 101 ~fD~V~~~~~~-~~--~~~-~~~~~~l~~~----~~~LkpgG~l~i~~~~ 142 (272)
+||+|++...- .. .+. -.-..+++.+ .++|+|||.+++....
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 89999997542 10 110 0124566665 8999999999986543
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.09 E-value=7.9e-10 Score=91.73 Aligned_cols=73 Identities=18% Similarity=0.277 Sum_probs=63.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP 97 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~ 97 (272)
...++.+++.+...++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++ . ..+++++++|+.+++
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~---~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--G---DERLEVINEDASKFP 89 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--C---CTTEEEECSCTTTCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--c---CCCeEEEEcchhhCC
Confidence 345678899999889999999999999999999987448999999999999999876 1 248999999999987
No 270
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.08 E-value=7.2e-09 Score=90.63 Aligned_cols=154 Identities=17% Similarity=0.169 Sum_probs=96.5
Q ss_pred CCEEEEECCCchHHHHHHHHc------------------cCCEEEEEcCC-----------HHHHHHHHHHHHHcCCCCC
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ------------------TGCKYTGITLS-----------EEQLKYAEIKVREAGLQDH 85 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~------------------~~~~v~gvd~s-----------~~~~~~a~~~~~~~g~~~~ 85 (272)
..+|+|+||++|.++..+.+. +..+|+..|+- +...+..+ ...|...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 579999999999998877653 34678888886 43333221 12232112
Q ss_pred eEEEEcccCC---CC-CCCCccEEEEechhhccChh-------------------------------------hHHHHHH
Q 024096 86 IRFYLCDYRQ---LP-KANKYDRIISCGMIEHVGHD-------------------------------------YMEEFFG 124 (272)
Q Consensus 86 i~~~~~d~~~---~~-~~~~fD~V~~~~~~~~~~~~-------------------------------------~~~~~l~ 124 (272)
..|+.+.... -. +++++|+|+|+.++||+++. |+..+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3555554333 22 77999999999999997432 1223477
Q ss_pred HHHhcCccCcEEEEEeecCCCC--ccc---cccCcc-----------hhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEE
Q 024096 125 CCESLLATHGLLVLQFISAPDQ--CYD---EYRLSP-----------GFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEH 188 (272)
Q Consensus 125 ~~~~~LkpgG~l~i~~~~~~~~--~~~---~~~~~~-----------~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~ 188 (272)
..++.|+|||+++++....+.. .+. .+.... ..+.....| .+.|+.+++...+.++.+|.+..
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P-~y~ps~~E~~~~le~~g~F~i~~ 288 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVP-IYAPSTEEVKRIVEEEGSFEILY 288 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCS-BCCCCHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCc-ccCCCHHHHHHHHHHcCCceEEE
Confidence 7799999999999987776554 111 110000 011112223 35689999987676656799888
Q ss_pred EEec
Q 024096 189 LENI 192 (272)
Q Consensus 189 ~~~~ 192 (272)
++.+
T Consensus 289 le~~ 292 (384)
T 2efj_A 289 LETF 292 (384)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.07 E-value=7.1e-10 Score=93.46 Aligned_cols=71 Identities=14% Similarity=0.300 Sum_probs=62.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCE----EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCK----YTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL 96 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~----v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 96 (272)
..++.+++.+.+.++.+|||||||+|.++..+++. +.+ |+++|+++.+++.++++. ..+++++++|+.++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIAR-LATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHH-HCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHh-CCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 45677888999899999999999999999999987 334 999999999999999883 25899999999998
Q ss_pred C
Q 024096 97 P 97 (272)
Q Consensus 97 ~ 97 (272)
+
T Consensus 103 ~ 103 (279)
T 3uzu_A 103 D 103 (279)
T ss_dssp C
T ss_pred C
Confidence 7
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.06 E-value=4.6e-10 Score=103.16 Aligned_cols=118 Identities=12% Similarity=0.036 Sum_probs=92.8
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-c------------------CCEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-T------------------GCKYTGITLSEEQLKYAEIKVREAGLQD 84 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~------------------~~~v~gvd~s~~~~~~a~~~~~~~g~~~ 84 (272)
+.|++.+...++.+|||.|||+|+++..+++. . ...++|+|+++.++..|+.++...|+..
T Consensus 159 ~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~ 238 (541)
T 2ar0_A 159 KTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEG 238 (541)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCc
Confidence 45666677778899999999999999887764 1 2479999999999999999998887753
Q ss_pred ----CeEEEEcccCCCC--CCCCccEEEEechhhccCh------------hhHHHHHHHHHhcCccCcEEEEEee
Q 024096 85 ----HIRFYLCDYRQLP--KANKYDRIISCGMIEHVGH------------DYMEEFFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 85 ----~i~~~~~d~~~~~--~~~~fD~V~~~~~~~~~~~------------~~~~~~l~~~~~~LkpgG~l~i~~~ 141 (272)
++.+.++|....+ ...+||+|+++..+..... +....++.++.+.|+|||++++..+
T Consensus 239 ~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 239 NLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp BGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 2788999987654 4578999999987765421 1123789999999999999988644
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.04 E-value=2.1e-09 Score=101.70 Aligned_cols=119 Identities=20% Similarity=0.241 Sum_probs=91.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-------------------------------------------cCC
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-------------------------------------------TGC 58 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-------------------------------------------~~~ 58 (272)
....++...+..++.+|||.+||+|.+++.++.. +..
T Consensus 178 LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 178 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 3455677777788899999999999999887754 125
Q ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C--CCCccEEEEechhhc-cC-hhhHHHHHHHHHhcC---
Q 024096 59 KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K--ANKYDRIISCGMIEH-VG-HDYMEEFFGCCESLL--- 130 (272)
Q Consensus 59 ~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~--~~~fD~V~~~~~~~~-~~-~~~~~~~l~~~~~~L--- 130 (272)
+++|+|+++.+++.|+.++..+|+.+.+++.++|+.++. + .++||+|+++..... ++ .++...+.+.+.+.|
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999878999999999875 2 238999999976532 22 234455555555444
Q ss_pred ccCcEEEEEe
Q 024096 131 ATHGLLVLQF 140 (272)
Q Consensus 131 kpgG~l~i~~ 140 (272)
.|||.+++.+
T Consensus 338 ~~g~~~~ilt 347 (703)
T 3v97_A 338 FGGWNLSLFS 347 (703)
T ss_dssp CTTCEEEEEE
T ss_pred CCCCeEEEEe
Confidence 5799998843
No 274
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.01 E-value=2.7e-10 Score=100.52 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=77.7
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc--CCCC
Q 024096 7 IFKSEHEDLEVGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA--GLQD 84 (272)
Q Consensus 7 ~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~--g~~~ 84 (272)
+|-.+...++++..+.+...... .+.+|.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|+.+++.+ |+ +
T Consensus 67 l~~p~~~~~eQat~e~vA~~~a~-~l~~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~ 143 (410)
T 3ll7_A 67 LYIPSRLSLEQSSGAVTSSYKSR-FIREGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-K 143 (410)
T ss_dssp CCCCCHHHHHHSCCHHHHHHGGG-GSCTTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-C
T ss_pred eecCCCCChhhcCHHHHHHHHHH-hcCCCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-C
Confidence 33333445666655555433222 1235899999999999999999986 789999999999999999999988 77 6
Q ss_pred CeEEEEcccCCC-CC--CCCccEEEEech
Q 024096 85 HIRFYLCDYRQL-PK--ANKYDRIISCGM 110 (272)
Q Consensus 85 ~i~~~~~d~~~~-~~--~~~fD~V~~~~~ 110 (272)
+++++++|+.+. +. +++||+|++...
T Consensus 144 ~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 144 DVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp EEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred cEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 899999999885 32 358999999754
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.01 E-value=1.4e-10 Score=96.58 Aligned_cols=90 Identities=13% Similarity=0.199 Sum_probs=71.9
Q ss_pred HHHHHHcCCCCC--CEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc-------C-CCCCeEEEEccc
Q 024096 24 SVLIEKARVSKG--QEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA-------G-LQDHIRFYLCDY 93 (272)
Q Consensus 24 ~~l~~~l~~~~~--~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~-------g-~~~~i~~~~~d~ 93 (272)
+.+++.+.+.++ .+|||+|||+|..+..+++. +++|+++|+++.+.+.++++++.. + +.++++++++|.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 566777777777 89999999999999999997 779999999999877777665432 1 224799999998
Q ss_pred CCC-C-CCCCccEEEEechhhcc
Q 024096 94 RQL-P-KANKYDRIISCGMIEHV 114 (272)
Q Consensus 94 ~~~-~-~~~~fD~V~~~~~~~~~ 114 (272)
.++ + ..++||+|++..++.+-
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHK 177 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCC
T ss_pred HHHHHhCcccCCEEEEcCCCCCc
Confidence 774 3 23579999999888663
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.01 E-value=6.5e-10 Score=102.06 Aligned_cols=117 Identities=15% Similarity=0.062 Sum_probs=89.2
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-c---------------CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeE
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-T---------------GCKYTGITLSEEQLKYAEIKVREAGLQDHIR 87 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~---------------~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~ 87 (272)
+.|++.+...++ +|||.+||+|++...+++. . ...++|+|+++.++..|+.++...|+..++.
T Consensus 235 ~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~ 313 (544)
T 3khk_A 235 TLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFG 313 (544)
T ss_dssp HHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCC
T ss_pred HHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccc
Confidence 445556665555 9999999999998877543 1 4689999999999999999999888865665
Q ss_pred EEEcccCCCC--CCCCccEEEEechhhcc-------------------------Chh--hHHHHHHHHHhcCccCcEEEE
Q 024096 88 FYLCDYRQLP--KANKYDRIISCGMIEHV-------------------------GHD--YMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 88 ~~~~d~~~~~--~~~~fD~V~~~~~~~~~-------------------------~~~--~~~~~l~~~~~~LkpgG~l~i 138 (272)
+.++|....+ ...+||+|+++..+..- +.. .--.++..+.+.|+|||++++
T Consensus 314 i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 314 KKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMAL 393 (544)
T ss_dssp SSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEE
T ss_pred eeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEE
Confidence 6889976655 45789999999876531 110 012589999999999999887
Q ss_pred Eee
Q 024096 139 QFI 141 (272)
Q Consensus 139 ~~~ 141 (272)
..+
T Consensus 394 VlP 396 (544)
T 3khk_A 394 LLA 396 (544)
T ss_dssp EEE
T ss_pred Eec
Confidence 543
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.96 E-value=2e-09 Score=99.76 Aligned_cols=102 Identities=15% Similarity=0.149 Sum_probs=78.0
Q ss_pred CCEEEEECCCchHHHHHHHHc---c-----------CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC--
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ---T-----------GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-- 98 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~---~-----------~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-- 98 (272)
+..|||+|||+|.++...++. . ..+|++||.++..+...+.... +++.++|+++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 468999999999997543221 1 2399999999977766555544 7888899999999999873
Q ss_pred ----CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 99 ----ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 99 ----~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
.++.|+|+|..+-.....+-..+.+..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 689999999766443333445678888899999999866
No 278
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.95 E-value=4.4e-09 Score=91.42 Aligned_cols=121 Identities=13% Similarity=0.114 Sum_probs=94.9
Q ss_pred HHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCC-----CCeEEEEcccCCCC--
Q 024096 26 LIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQ-----DHIRFYLCDYRQLP-- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~-----~~i~~~~~d~~~~~-- 97 (272)
....++..+|.+|||+++|.|+-+.++++. .+..++++|+++..+...+++++..+.. .++.+...|...++
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 445568899999999999999999999987 4458999999999999999999877642 47899999988876
Q ss_pred CCCCccEEEEechhhc---------------cCh-------hhHHHHHHHHHhcCccCcEEEEEeecCCCC
Q 024096 98 KANKYDRIISCGMIEH---------------VGH-------DYMEEFFGCCESLLATHGLLVLQFISAPDQ 146 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~---------------~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 146 (272)
..+.||.|++...... ... .-...++++..+.|||||+|+.++.+....
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 4578999998543111 000 112468889999999999999988775443
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.94 E-value=1.1e-09 Score=90.86 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=67.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCE--EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCK--YTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~--v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
..++.+++.+.+.++.+|||||||+|.++. +.+ +.+ |+++|+++.+++.++++.... ++++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCH
Confidence 456788888888899999999999999999 654 356 999999999999999876432 47999999999887
Q ss_pred CC-----CCccEEEEechh
Q 024096 98 KA-----NKYDRIISCGMI 111 (272)
Q Consensus 98 ~~-----~~fD~V~~~~~~ 111 (272)
++ +..|.|+++...
T Consensus 82 ~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHHHHHTSCEEEEEECCT
T ss_pred HHhhcccCCceEEEECCCC
Confidence 21 234677776553
No 280
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.90 E-value=6.7e-09 Score=87.48 Aligned_cols=110 Identities=18% Similarity=0.250 Sum_probs=86.0
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--C--CCCCeEEEEcccCCCC--CCCCccEE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREA--G--LQDHIRFYLCDYRQLP--KANKYDRI 105 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~--g--~~~~i~~~~~d~~~~~--~~~~fD~V 105 (272)
....+||-||.|.|+.++.+.+. +..+|+.+|+++..++.+++.+... + -.++++++.+|....- ..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45679999999999999999988 4579999999999999999987531 2 1368999999988866 55789999
Q ss_pred EEechhhccChh--hHHHHHHHHHhcCccCcEEEEEeec
Q 024096 106 ISCGMIEHVGHD--YMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 106 ~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++...-..-+.. .-.++++.+.+.|+|||.++.+..+
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 986432111101 1257999999999999999986544
No 281
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.90 E-value=9.8e-09 Score=94.11 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=86.9
Q ss_pred CCCCCEEEEECCCchHHHHHHHHc----cCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEcccCCC--C--CCCCc
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQ----TGCKYTGITLSEEQLKYAEIKVREAGLQ-DHIRFYLCDYRQL--P--KANKY 102 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~----~~~~v~gvd~s~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~--~--~~~~f 102 (272)
..++.+|+|.+||+|++...+++. ....++|+|+++.+...|+.++...|+. +++.+.++|.... + ...+|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 357789999999999998888776 2578999999999999999999888875 4789999998766 4 45789
Q ss_pred cEEEEechhhccC-------------------h--hhHHHHHHHHHhcCc-cCcEEEEEee
Q 024096 103 DRIISCGMIEHVG-------------------H--DYMEEFFGCCESLLA-THGLLVLQFI 141 (272)
Q Consensus 103 D~V~~~~~~~~~~-------------------~--~~~~~~l~~~~~~Lk-pgG~l~i~~~ 141 (272)
|+|+++..+..-. . +.--.++..+.+.|+ |||++.+..+
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 9999997653210 0 001248999999999 9999987543
No 282
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.89 E-value=9.3e-09 Score=89.20 Aligned_cols=157 Identities=15% Similarity=0.204 Sum_probs=98.8
Q ss_pred CCEEEEECCCchHHHHHHHHc-----------------cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEE---cccC
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ-----------------TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYL---CDYR 94 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~-----------------~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~---~d~~ 94 (272)
..+|+|+||++|.++..+.+. +..+|+..|+..+.....-+.+.......+..|+. +.+-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 468999999999877654332 34678899987766655544432210001223444 4443
Q ss_pred CCC-CCCCccEEEEechhhccCh-------------------------------hhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 95 QLP-KANKYDRIISCGMIEHVGH-------------------------------DYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 95 ~~~-~~~~fD~V~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
.-. +++++|+|+|+.++||+++ +|+..+|+..++.|+|||++++....
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~g 211 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG 211 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEE
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEec
Confidence 333 7899999999999999743 24556799999999999999998877
Q ss_pred CCCCcc---------ccccCcc------hh-----hhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEec
Q 024096 143 APDQCY---------DEYRLSP------GF-----IKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENI 192 (272)
Q Consensus 143 ~~~~~~---------~~~~~~~------~~-----~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~ 192 (272)
.+.... +.+.... +. +.....| .+.|+.+++...+.++.+|.+..++.+
T Consensus 212 r~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P-~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 212 RRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIP-QYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp CSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCC-CBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred CCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCC-ccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 655321 0010000 00 1111222 356888998877776667788776554
No 283
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.82 E-value=2.9e-09 Score=88.08 Aligned_cols=118 Identities=17% Similarity=0.159 Sum_probs=77.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-C
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQT-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-K 98 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~ 98 (272)
.++..+.++..++++.+|||+|||+|+++..+++.. ...+.|+|++..+....... ...+ .++.....++.... .
T Consensus 61 ~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv~~l~ 137 (277)
T 3evf_A 61 AKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDIHRLE 137 (277)
T ss_dssp HHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCTTTSC
T ss_pred HHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC--CCeEEEeccceehhcC
Confidence 456677777667899999999999999999988763 34788888874321000000 0001 14455666654444 4
Q ss_pred CCCccEEEEechhhccChhhH-----HHHHHHHHhcCccC-cEEEEEeec
Q 024096 99 ANKYDRIISCGMIEHVGHDYM-----EEFFGCCESLLATH-GLLVLQFIS 142 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~-----~~~l~~~~~~Lkpg-G~l~i~~~~ 142 (272)
+++||+|+|..+.+ .+.... ..+++.+.++|+|| |.+++..+.
T Consensus 138 ~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 138 PVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 57899999986554 332221 23568889999999 999985444
No 284
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.77 E-value=8.8e-09 Score=85.69 Aligned_cols=134 Identities=14% Similarity=0.135 Sum_probs=82.2
Q ss_pred cccccCCCCCCHHHHHHHHHH--HHHHHcC--CCCCCEEEEECCCchHHHHHHHHc--------c-----CCEEEEEcCC
Q 024096 4 SCAIFKSEHEDLEVGQMRKVS--VLIEKAR--VSKGQEVLDIGCGWGTLAIEIVKQ--------T-----GCKYTGITLS 66 (272)
Q Consensus 4 ~~~~~~~~~~~l~~aq~~~~~--~l~~~l~--~~~~~~vLDiG~G~G~~~~~l~~~--------~-----~~~v~gvd~s 66 (272)
.-.|++.. ..+.++....+. .+-.+.. ..++.+|||+|+|+|..+..+++. + ..+++++|..
T Consensus 27 ~e~y~s~~-~~l~E~~~vF~~~~~lp~r~~~~~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~ 105 (257)
T 2qy6_A 27 DDVYFSND-NGLEETRYVFLGGNQLEARFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKF 105 (257)
T ss_dssp TEESSCTT-THHHHHHHHHHHHTTHHHHGGGCSSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESS
T ss_pred CccccCCC-CHHHHHHHHHHhccchHHHHHhcCCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECC
Confidence 33455443 346666555432 1222222 345679999999999988776542 2 2589999987
Q ss_pred H---HH-----------HHHHHHHHHHc----------CCC---CCeEEEEcccCC-CC-CC----CCccEEEEechhh-
Q 024096 67 E---EQ-----------LKYAEIKVREA----------GLQ---DHIRFYLCDYRQ-LP-KA----NKYDRIISCGMIE- 112 (272)
Q Consensus 67 ~---~~-----------~~~a~~~~~~~----------g~~---~~i~~~~~d~~~-~~-~~----~~fD~V~~~~~~~- 112 (272)
| +. .+.+++.+... .+. .+++++.+|+.+ ++ .+ ..||+|+....-.
T Consensus 106 p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~ 185 (257)
T 2qy6_A 106 PLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA 185 (257)
T ss_dssp CCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT
T ss_pred cCCHHHHHHHHhcChhHHHHHHHHHHhccccccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc
Confidence 6 33 33566665431 011 367899999877 33 22 2799999864211
Q ss_pred ccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 113 HVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
..++--...+++.+.+.|+|||+++.
T Consensus 186 ~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 186 KNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp TCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred cChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 11100126799999999999999874
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.69 E-value=5e-08 Score=81.95 Aligned_cols=123 Identities=10% Similarity=0.098 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHcC-CCCCCEEEEECCCchHHHHHHHHc------cCCEEEEEcCCHH-------------------
Q 024096 15 LEVGQMRKVSVLIEKAR-VSKGQEVLDIGCGWGTLAIEIVKQ------TGCKYTGITLSEE------------------- 68 (272)
Q Consensus 15 l~~aq~~~~~~l~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~------~~~~v~gvd~s~~------------------- 68 (272)
+...+...+..+++.+. ......|||+|+..|..+..+++. ++.+++++|..+.
T Consensus 86 v~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~ 165 (282)
T 2wk1_A 86 IGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHR 165 (282)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGG
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccc
Confidence 33455555666666653 234459999999999999988764 2678999996421
Q ss_pred -------HHHHHHHHHHHcCCC-CCeEEEEcccCC-CC--CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 69 -------QLKYAEIKVREAGLQ-DHIRFYLCDYRQ-LP--KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 69 -------~~~~a~~~~~~~g~~-~~i~~~~~d~~~-~~--~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
..+.+++++++.|+. ++++++.+|+.+ ++ ++++||+|+...-.. +.....++.+...|+|||.++
T Consensus 166 ~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv 241 (282)
T 2wk1_A 166 RNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVI 241 (282)
T ss_dssp GHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEE
T ss_pred ccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEE
Confidence 367789999999984 899999999865 34 346899999875321 334688999999999999999
Q ss_pred EEee
Q 024096 138 LQFI 141 (272)
Q Consensus 138 i~~~ 141 (272)
+.++
T Consensus 242 ~DD~ 245 (282)
T 2wk1_A 242 VDDY 245 (282)
T ss_dssp ESSC
T ss_pred EcCC
Confidence 8654
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.63 E-value=1.5e-07 Score=88.62 Aligned_cols=110 Identities=10% Similarity=0.012 Sum_probs=78.4
Q ss_pred CCCCEEEEECCCchHHHHHHHHcc----CCEEEEEcCCHHHHHHH--HHHHHHcCCC---CCeEEEEcccCCCC--CCCC
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQT----GCKYTGITLSEEQLKYA--EIKVREAGLQ---DHIRFYLCDYRQLP--KANK 101 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~----~~~v~gvd~s~~~~~~a--~~~~~~~g~~---~~i~~~~~d~~~~~--~~~~ 101 (272)
.++.+|||.|||+|.++..+++.. ..+++|+|+++.+++.| +.++..+++. ....+...|+.... ...+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 467899999999999999998863 25799999999999999 5444332221 12356666666643 4578
Q ss_pred ccEEEEechhhc-cCh-h-------------------------hHHHHHHHHHhcCccCcEEEEEeec
Q 024096 102 YDRIISCGMIEH-VGH-D-------------------------YMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 102 fD~V~~~~~~~~-~~~-~-------------------------~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
||+|+++..+.. ... . ....++..+.+.|+|||++++..+.
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 999999987722 110 0 1234788899999999999985443
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.62 E-value=1.3e-08 Score=84.41 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=76.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc--ccCCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC--DYRQLP 97 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~--d~~~~~ 97 (272)
.++..+.++..+.++.+|||+|||+|+++..+++. ....++|+|++..+...+... ...+ .++..... |+..+
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv~~l- 152 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDVFNM- 152 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCGGGS-
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcchhhc-
Confidence 45667777777889999999999999999998876 345789999976432111100 0001 13333332 33333
Q ss_pred CCCCccEEEEechhhccChhhH-----HHHHHHHHhcCccC--cEEEEEeec
Q 024096 98 KANKYDRIISCGMIEHVGHDYM-----EEFFGCCESLLATH--GLLVLQFIS 142 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~-----~~~l~~~~~~Lkpg--G~l~i~~~~ 142 (272)
+..++|+|+|..+.. .+.... ..+++-+.++|+|| |.+++-.+.
T Consensus 153 ~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 153 EVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 357899999987655 333221 23577778999999 999986554
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.61 E-value=8.3e-08 Score=79.88 Aligned_cols=83 Identities=17% Similarity=0.188 Sum_probs=71.2
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----- 97 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----- 97 (272)
++.+++.+.+.++..+||.+||.|+.+..++++ +.+|+|+|.++.+++.+++ +.. +++.++++++.+++
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHH
Confidence 467888888999999999999999999999998 7899999999999999988 533 48999999999875
Q ss_pred -CCCCccEEEEechh
Q 024096 98 -KANKYDRIISCGMI 111 (272)
Q Consensus 98 -~~~~fD~V~~~~~~ 111 (272)
..+++|.|+....+
T Consensus 85 ~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 85 LGVERVDGILADLGV 99 (285)
T ss_dssp TTCSCEEEEEEECSC
T ss_pred cCCCCcCEEEeCCcc
Confidence 22579999986543
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.53 E-value=3.3e-07 Score=68.44 Aligned_cols=98 Identities=12% Similarity=0.034 Sum_probs=68.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCch-HHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWG-TLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK 98 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G-~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~ 98 (272)
....+.+.+.+. ++.+|||||||.| ..+..|++..+..|+++|+++..++ +++.|+.+...
T Consensus 23 e~LaeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~ 84 (153)
T 2k4m_A 23 NDLAVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRM 84 (153)
T ss_dssp HHHHHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCH
T ss_pred HHHHHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCcc
Confidence 334455666653 5679999999999 6999999855899999999885444 88889877442
Q ss_pred C--CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 99 A--NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 99 ~--~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
+ +.||+|.+...- .++...+-++++ +-|.-++|....
T Consensus 85 ~~Y~~~DLIYsirPP-----~El~~~i~~lA~--~v~adliI~pL~ 123 (153)
T 2k4m_A 85 EIYRGAALIYSIRPP-----AEIHSSLMRVAD--AVGARLIIKPLT 123 (153)
T ss_dssp HHHTTEEEEEEESCC-----TTTHHHHHHHHH--HHTCEEEEECBT
T ss_pred cccCCcCEEEEcCCC-----HHHHHHHHHHHH--HcCCCEEEEcCC
Confidence 2 589999886532 233445555554 456777775443
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.47 E-value=2.3e-07 Score=80.60 Aligned_cols=108 Identities=18% Similarity=0.198 Sum_probs=80.9
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc-----CC--CCCeEEEEcccCCCC-----CCC
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA-----GL--QDHIRFYLCDYRQLP-----KAN 100 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~-----g~--~~~i~~~~~d~~~~~-----~~~ 100 (272)
.++.+||-||.|.|..++.+.+.+..+|+.+|+++..++.+++.+... .. .++++++.+|..+.- ..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 456899999999999999999876679999999999999999875321 11 135899999976542 346
Q ss_pred CccEEEEechhh-------ccCh-hhHHHHHHHHHhcCccCcEEEEEe
Q 024096 101 KYDRIISCGMIE-------HVGH-DYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 101 ~fD~V~~~~~~~-------~~~~-~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+||+|+....-. .... .....+++.+.+.|+|||.++.+.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 899999863211 1111 123578999999999999998754
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.47 E-value=1.8e-06 Score=79.03 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=87.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--------------cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeE
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--------------TGCKYTGITLSEEQLKYAEIKVREAGLQDHIR 87 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--------------~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~ 87 (272)
.++.|++.+...++.+|+|.+||+|++...+.+. ....++|+|+++.+...|+.++-..|.. ...
T Consensus 205 Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~ 283 (530)
T 3ufb_A 205 VVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPR 283 (530)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCE
T ss_pred HHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-ccc
Confidence 3456677778888999999999999998776543 1246999999999999999988887774 457
Q ss_pred EEEcccCCCC-----CCCCccEEEEechhhccCh--------------hhHHHHHHHHHhcCc-------cCcEEEEEee
Q 024096 88 FYLCDYRQLP-----KANKYDRIISCGMIEHVGH--------------DYMEEFFGCCESLLA-------THGLLVLQFI 141 (272)
Q Consensus 88 ~~~~d~~~~~-----~~~~fD~V~~~~~~~~~~~--------------~~~~~~l~~~~~~Lk-------pgG~l~i~~~ 141 (272)
+.++|....+ ...+||+|+++..+.--.. +.-..++..+.+.|| |||++.+..+
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 8888876654 2357999999988742110 111246777777776 7999888544
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.45 E-value=1.1e-06 Score=72.91 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=81.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc-ccCCCC
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC-DYRQLP 97 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~ 97 (272)
..++..+.++..+.++.+|||+||++|+++.+++...++ +|+|+|+...-.+.= ......++ +.+.+..+ |+..++
T Consensus 80 ~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~l~ 157 (321)
T 3lkz_A 80 TAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFYRP 157 (321)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTSSC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhhCC
Confidence 456677888878889999999999999999988887454 699999965411000 00001122 24788888 887777
Q ss_pred CCCCccEEEEechhhccChhhH-----HHHHHHHHhcCccC-cEEEEEeec
Q 024096 98 KANKYDRIISCGMIEHVGHDYM-----EEFFGCCESLLATH-GLLVLQFIS 142 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~-----~~~l~~~~~~Lkpg-G~l~i~~~~ 142 (272)
+ .++|+|+|.-. +--+.... ..+|+-+..+|++| |-+++-.+.
T Consensus 158 ~-~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 158 S-ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp C-CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred C-CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 5 67999999755 44433221 22666667889999 888885444
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.39 E-value=3.5e-06 Score=67.74 Aligned_cols=119 Identities=16% Similarity=0.201 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc-ccCCC
Q 024096 19 QMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTG-CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC-DYRQL 96 (272)
Q Consensus 19 q~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~ 96 (272)
...++..+.++..+.++.+|||+||++|+++.+++...+ .+|+|+|+-..-.+.= ......|+ +.++|..+ |+..+
T Consensus 63 a~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gw-n~v~fk~gvDv~~~ 140 (267)
T 3p8z_A 63 GSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGW-NIVKLMSGKDVFYL 140 (267)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTT-TSEEEECSCCGGGC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCc-CceEEEeccceeec
Confidence 345677888888889999999999999999998888744 4799999965422100 00112244 47999999 98777
Q ss_pred CCCCCccEEEEechhhccChhh--H---HHHHHHHHhcCccCcEEEEEeec
Q 024096 97 PKANKYDRIISCGMIEHVGHDY--M---EEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 97 ~~~~~fD~V~~~~~~~~~~~~~--~---~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
++ .++|+|+|.-.= .-+... . ..+|+-+.++|++ |-+++-.+.
T Consensus 141 ~~-~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 141 PP-EKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp CC-CCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred CC-ccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 65 679999996432 222111 1 2367777899998 788775444
No 294
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.38 E-value=1.3e-06 Score=75.63 Aligned_cols=71 Identities=10% Similarity=0.117 Sum_probs=56.2
Q ss_pred CCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEech
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGM 110 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~ 110 (272)
+.+|++|||+||.+|+++..++++ +.+|++||+.+- ... +.. .++|.++++|..... ...++|+|+|..+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~l-~~~----l~~---~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGPM-AQS----LMD---TGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSCC-CHH----HHT---TTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhhc-Chh----hcc---CCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 578999999999999999999997 789999998641 111 111 148999999988877 4568999999654
Q ss_pred h
Q 024096 111 I 111 (272)
Q Consensus 111 ~ 111 (272)
.
T Consensus 280 ~ 280 (375)
T 4auk_A 280 E 280 (375)
T ss_dssp S
T ss_pred C
Confidence 3
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.29 E-value=4.9e-06 Score=67.90 Aligned_cols=114 Identities=16% Similarity=0.171 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCC---CC---eEEEEc
Q 024096 19 QMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQ---DH---IRFYLC 91 (272)
Q Consensus 19 q~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~---~~---i~~~~~ 91 (272)
...++.+|-++.-++|+.+|||+||+.|+++..+++..+. .|.|.++.... . ...+. .. +.+.++
T Consensus 58 AayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i~~~~G 129 (269)
T 2px2_A 58 GTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIVTMKSG 129 (269)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGEEEECS
T ss_pred HHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEEEeecc
Confidence 3445677777766789999999999999999999886222 33444443220 0 00111 12 355557
Q ss_pred -ccCCCCCCCCccEEEEechhhccChhhHH-----HHHHHHHhcCccCc-EEEEEeec
Q 024096 92 -DYRQLPKANKYDRIISCGMIEHVGHDYME-----EFFGCCESLLATHG-LLVLQFIS 142 (272)
Q Consensus 92 -d~~~~~~~~~fD~V~~~~~~~~~~~~~~~-----~~l~~~~~~LkpgG-~l~i~~~~ 142 (272)
|+.+++ +.++|+|+|.-.-. .+....+ ..++-+.++|+||| .+++-.+.
T Consensus 130 ~Df~~~~-~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 130 VDVFYKP-SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCGGGSC-CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCccCCC-CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 988754 35799999975332 3222111 25666779999999 88886554
No 296
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.26 E-value=9.6e-07 Score=73.64 Aligned_cols=116 Identities=16% Similarity=0.159 Sum_probs=71.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc--ccCCCCC
Q 024096 22 KVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC--DYRQLPK 98 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~--d~~~~~~ 98 (272)
++..+.++--+.++.+|||+||++|+++..+++. .-..|+|+|+.......... ....+ .++..... |+..+ .
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~--~~iv~~~~~~di~~l-~ 144 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLG--WNIVKFKDKSNVFTM-P 144 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTT--GGGEEEECSCCTTTS-C
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccC--CceEEeecCceeeec-C
Confidence 4555666633578899999999999999999986 33478899986432100000 00001 12222222 33332 3
Q ss_pred CCCccEEEEechhhccChhhH-----HHHHHHHHhcCccC-cEEEEEeec
Q 024096 99 ANKYDRIISCGMIEHVGHDYM-----EEFFGCCESLLATH-GLLVLQFIS 142 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~-----~~~l~~~~~~Lkpg-G~l~i~~~~ 142 (272)
.+.+|+|+|..+-. .+..+. ..+++-+.++|+|| |.+++-.+.
T Consensus 145 ~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 145 TEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 47899999976544 433221 24577778999999 999986554
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.20 E-value=6.8e-06 Score=69.72 Aligned_cols=58 Identities=22% Similarity=0.216 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA 80 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~ 80 (272)
..+..+++... .+++.|||++||+|..+..+++. +.+++|+|+++.+++.|++++...
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 45567777766 68899999999999999998875 889999999999999999998765
No 298
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.14 E-value=8.5e-05 Score=63.90 Aligned_cols=154 Identities=16% Similarity=0.217 Sum_probs=106.7
Q ss_pred CCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcC--------------------CCCCeEEEEc
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAG--------------------LQDHIRFYLC 91 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g--------------------~~~~i~~~~~ 91 (272)
.+...|+.+|||.......+... ++.+++-+|. |..++.-++.+...+ .+++.+++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 45679999999999999998875 5678888887 888888888877652 1357899999
Q ss_pred ccCCCC----------CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCC---CCccccccCcchhh
Q 024096 92 DYRQLP----------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAP---DQCYDEYRLSPGFI 158 (272)
Q Consensus 92 d~~~~~----------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~---~~~~~~~~~~~~~~ 158 (272)
|+.+.. ..+...++++..++.+++.+....+++.+.+.. |+|.+++-+...+ ...+... ....+
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~--m~~~l 251 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAI--MQSNL 251 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHH--HHHHH
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHH--HHHHh
Confidence 988732 124678999999999999998999999999877 7777766566555 2222110 00111
Q ss_pred hh---cccCC-CCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 159 KE---YIFPG-GCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 159 ~~---~~~p~-~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
.. ...++ ..+++.++..+. +.++||. ...++.
T Consensus 252 ~~~rg~~l~~~~~y~s~~~~~~r-l~~~Gf~--~a~d~~ 287 (334)
T 1rjd_A 252 KESRNLEMPTLMTYNSKEKYASR-WSAAPNV--IVNDMW 287 (334)
T ss_dssp HHHHCCCCTTTTTTCSHHHHHGG-GTTSSEE--EEEEHH
T ss_pred hcccCCcccccccCCCHHHHHHH-HHHCCCC--cccCHH
Confidence 11 11222 245788876644 5579997 445544
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.95 E-value=1e-05 Score=68.98 Aligned_cols=85 Identities=13% Similarity=0.105 Sum_probs=70.4
Q ss_pred HHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---
Q 024096 23 VSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--- 97 (272)
Q Consensus 23 ~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--- 97 (272)
++.+++.+.+.+|..++|..||.|+.+..+++. +..+|+|+|.++.+++.++ ++ ..+++.++++++.++.
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYV 120 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHH
Confidence 477889999999999999999999999999987 4679999999999999884 33 1368999999998875
Q ss_pred C----CCCccEEEEechhh
Q 024096 98 K----ANKYDRIISCGMIE 112 (272)
Q Consensus 98 ~----~~~fD~V~~~~~~~ 112 (272)
. .+++|.|+....+.
T Consensus 121 ~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 121 AERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHTTCTTCEEEEEEECSCC
T ss_pred HhcCCCCcccEEEECCccC
Confidence 1 13699999876543
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.83 E-value=6.4e-05 Score=65.01 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=60.1
Q ss_pred HHHHHHHHHHcCCCC------CCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc
Q 024096 20 MRKVSVLIEKARVSK------GQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD 92 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~------~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d 92 (272)
.+.++.+++.+++.+ +..|||||.|.|.++..|++. ...+++++|+++..+...++.. . .++++++++|
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D 113 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRD 113 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSC
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECC
Confidence 345677888887653 589999999999999999986 3569999999999999888775 2 2589999999
Q ss_pred cCCC
Q 024096 93 YRQL 96 (272)
Q Consensus 93 ~~~~ 96 (272)
+.++
T Consensus 114 ~l~~ 117 (353)
T 1i4w_A 114 PYDW 117 (353)
T ss_dssp TTCH
T ss_pred ccch
Confidence 9654
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.82 E-value=0.00055 Score=58.22 Aligned_cols=106 Identities=16% Similarity=0.166 Sum_probs=83.2
Q ss_pred CCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC--CCCeEEEEcccCCCC----------CCCCc
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGL--QDHIRFYLCDYRQLP----------KANKY 102 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~~----------~~~~f 102 (272)
...|+++|||.=.....+....+.+++-+| .|..++..++.+...+. .++.+++.+|+.+ . ..+.-
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 357999999976665555432247899999 59999999999976542 4578999999886 3 01345
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
-++++..+++++++++...+++.+.+.+.||+.+++....
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 6888889999999988899999999999999999886554
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.77 E-value=6.7e-05 Score=62.25 Aligned_cols=59 Identities=24% Similarity=0.290 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAG 81 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g 81 (272)
..++.+++... .+++.|||..||+|..+....+. +.+++|+|+++..++.++++++.++
T Consensus 200 ~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL-GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 34566666654 68899999999999999988775 8899999999999999999987654
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.60 E-value=9.4e-05 Score=61.45 Aligned_cols=109 Identities=21% Similarity=0.199 Sum_probs=70.7
Q ss_pred HHHHHHHHc-----CCCCCCEEEEECC------CchHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEE
Q 024096 22 KVSVLIEKA-----RVSKGQEVLDIGC------GWGTLAIEIVKQ-T-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRF 88 (272)
Q Consensus 22 ~~~~l~~~l-----~~~~~~~vLDiG~------G~G~~~~~l~~~-~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~ 88 (272)
++..+++-+ ..+.+++|||+|+ -+|+. .+.+. + ++.++++|+.+-.. ..-.+
T Consensus 92 kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-------------da~~~ 156 (344)
T 3r24_A 92 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-------------DADST 156 (344)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-------------SSSEE
T ss_pred HHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-------------CCCeE
Confidence 344555544 3568899999996 67773 33333 4 36999999976321 11255
Q ss_pred EEcccCCCCCCCCccEEEEechhhccCh---------hhHHHHHHHHHhcCccCcEEEEEeecCCC
Q 024096 89 YLCDYRQLPKANKYDRIISCGMIEHVGH---------DYMEEFFGCCESLLATHGLLVLQFISAPD 145 (272)
Q Consensus 89 ~~~d~~~~~~~~~fD~V~~~~~~~~~~~---------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 145 (272)
+++|..+.....+||+|+|.-.-...+. .-.+.+++-+.+.|+|||.+++-.+-.+.
T Consensus 157 IqGD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 157 LIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp EESCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EEccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 9999876665688999999743221111 12345666678899999999986555443
No 304
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.52 E-value=2.8e-05 Score=82.83 Aligned_cols=104 Identities=20% Similarity=0.214 Sum_probs=56.0
Q ss_pred CCCCEEEEECCCchHHHHHHHHcc------CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C-CCCCccE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQT------GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P-KANKYDR 104 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~------~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~-~~~~fD~ 104 (272)
.+..+|||||.|+|..+..+.+.. ..+++..|+|+...+.++++++.. .+....-|..+. + ....||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 356899999999998766655431 237899999988887787776543 233322243332 1 2467999
Q ss_pred EEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeec
Q 024096 105 IISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFIS 142 (272)
Q Consensus 105 V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 142 (272)
|++.+++|.. ++....+++++++|||||++++.+..
T Consensus 1315 via~~vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1315 LVCNCALATL--GDPAVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp EEEECC----------------------CCEEEEEEC-
T ss_pred EEEccccccc--ccHHHHHHHHHHhcCCCcEEEEEecc
Confidence 9999999765 45678999999999999999986543
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.34 E-value=0.00073 Score=57.00 Aligned_cols=156 Identities=17% Similarity=0.144 Sum_probs=89.3
Q ss_pred ccccCCCCCCHHHHHHHHHH--HHHHHcCCCCCCEEEEECCCchHHHHHHH----Hc-cCC--EEEEEcCCH--------
Q 024096 5 CAIFKSEHEDLEVGQMRKVS--VLIEKARVSKGQEVLDIGCGWGTLAIEIV----KQ-TGC--KYTGITLSE-------- 67 (272)
Q Consensus 5 ~~~~~~~~~~l~~aq~~~~~--~l~~~l~~~~~~~vLDiG~G~G~~~~~l~----~~-~~~--~v~gvd~s~-------- 67 (272)
-.||+..+..+.+++.-.+. .+.++..-.+.-+|||+|-|+|.+..... +. +.. +++.+|..+
T Consensus 65 e~YhS~~~GAl~Es~hVFi~~~~L~~r~~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~ 144 (308)
T 3vyw_A 65 EPYHSQTAGAIRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILP 144 (308)
T ss_dssp EESSCTTTCHHHHHHHHTHHHHTHHHHHHHCSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCC
T ss_pred CccCCCCCcHHHHHHHHHhccCCchHHhcCCCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhch
Confidence 34555455568888877664 23334333445689999999998654322 22 344 556776421
Q ss_pred H-HHHHHHHHHHHcC-C-CC--CeEEEEcccCCC-C--CCCCccEEEEechhhccChhhH----HHHHHHHHhcCccCcE
Q 024096 68 E-QLKYAEIKVREAG-L-QD--HIRFYLCDYRQL-P--KANKYDRIISCGMIEHVGHDYM----EEFFGCCESLLATHGL 135 (272)
Q Consensus 68 ~-~~~~a~~~~~~~g-~-~~--~i~~~~~d~~~~-~--~~~~fD~V~~~~~~~~~~~~~~----~~~l~~~~~~LkpgG~ 135 (272)
. ..+.......... . .. .+.+..+|+.+. + ....+|+|+...-- |.+++ ..+++.+++.++|||.
T Consensus 145 ~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~~l~~l~~~~~Da~flDgFs---P~kNPeLWs~e~f~~l~~~~~pgg~ 221 (308)
T 3vyw_A 145 EPYREIHEFLLERVPEYEGERLSLKVLLGDARKRIKEVENFKADAVFHDAFS---PYKNPELWTLDFLSLIKERIDEKGY 221 (308)
T ss_dssp TTSHHHHHHHHHHCSEEECSSEEEEEEESCHHHHGGGCCSCCEEEEEECCSC---TTTSGGGGSHHHHHHHHTTEEEEEE
T ss_pred HhHHHHHHHHHHhCccccCCcEEEEEEechHHHHHhhhcccceeEEEeCCCC---cccCcccCCHHHHHHHHHHhCCCcE
Confidence 1 1122222222211 0 12 346788887653 3 23479999986521 11222 5899999999999998
Q ss_pred EEEEeecCCCCccccccCcchhhhhcccCCCCCCCHHHHHHHhhcCCCcEEEEEEecC
Q 024096 136 LVLQFISAPDQCYDEYRLSPGFIKEYIFPGGCLPSLGRVTSAMTSSSGLCVEHLENIG 193 (272)
Q Consensus 136 l~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~ 193 (272)
++ +++ ... .++..++++||.|....-.+
T Consensus 222 la--TYt---------------------------aag-~VRR~L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 222 WV--SYS---------------------------SSL-SVRKSLLTLGFKVGSSREIG 249 (308)
T ss_dssp EE--ESC---------------------------CCH-HHHHHHHHTTCEEEEEECC-
T ss_pred EE--EEe---------------------------CcH-HHHHHHHHCCCEEEecCCCC
Confidence 86 222 122 23344456999998876654
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.32 E-value=0.0011 Score=57.59 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=69.9
Q ss_pred HHHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC----C-
Q 024096 25 VLIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL----P- 97 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~----~- 97 (272)
.+.+...++++++||-+|+|. |..+..+++..++ +|+++|.++...+.+++. |.. .++..+-.+. .
T Consensus 181 al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~ 253 (371)
T 1f8f_A 181 ACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKTQDPVAAIKE 253 (371)
T ss_dssp HHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCccCHHHHHHH
Confidence 344666788999999999986 7888888887677 799999999988888654 431 2332221111 1
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+.+|+|+-. .+. ...++...+.|+++|++++.
T Consensus 254 ~~~gg~D~vid~-----~g~---~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 254 ITDGGVNFALES-----TGS---PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp HTTSCEEEEEEC-----SCC---HHHHHHHHHTEEEEEEEEEC
T ss_pred hcCCCCcEEEEC-----CCC---HHHHHHHHHHHhcCCEEEEe
Confidence 12379999854 221 35677888999999999873
No 307
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.29 E-value=5.5e-05 Score=62.99 Aligned_cols=104 Identities=13% Similarity=0.024 Sum_probs=80.2
Q ss_pred CCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-C----CCCCCccEEEEec
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-L----PKANKYDRIISCG 109 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~----~~~~~fD~V~~~~ 109 (272)
+..+||+=+|+|.+++.+.+. +.+++.+|.++..++..+++++. .++++++..|... + ++..+||+|++..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 457999999999999998884 68999999999999999988764 3589999999644 2 2446799999998
Q ss_pred hhhccChhhHHHHHHHHHh--cCccCcEEEEEeecCC
Q 024096 110 MIEHVGHDYMEEFFGCCES--LLATHGLLVLQFISAP 144 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~--~LkpgG~l~i~~~~~~ 144 (272)
..+.- .+...+++.+.+ .+.|+|.+++.-+...
T Consensus 168 PYe~k--~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 168 SYERK--EEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp CCCST--THHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred CCCCC--cHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 87743 244555655543 4569999998655533
No 308
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.25 E-value=0.0016 Score=57.21 Aligned_cols=105 Identities=16% Similarity=0.061 Sum_probs=70.3
Q ss_pred HHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C------
Q 024096 27 IEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P------ 97 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~------ 97 (272)
++...+.+|++||-+|+|. |..+..+++..++ +|+++|.+++..+.+++. |. .++..+-.+. .
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga----~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 178 CVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----GF----ETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----TC----EEEETTSSSCHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CC----cEEcCCCcchHHHHHHHH
Confidence 4667889999999999986 8888888887777 999999999888777542 42 2332222222 1
Q ss_pred -CCCCccEEEEechhhccC------hhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIEHVG------HDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~------~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-.-.-.... .......++.+.+.|+++|++++.
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 123699998653322100 000124678888999999998863
No 309
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.10 E-value=0.002 Score=55.48 Aligned_cols=97 Identities=26% Similarity=0.282 Sum_probs=69.5
Q ss_pred HHHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCcc
Q 024096 25 VLIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYD 103 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD 103 (272)
..+....+.+|++||-+|+|. |..+..+++..+++|++++.+++..+.+++ .|.. .++ .+...+. +.+|
T Consensus 167 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~-~~~~~~~--~~~D 236 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVK---HFY-TDPKQCK--EELD 236 (348)
T ss_dssp HHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCS---EEE-SSGGGCC--SCEE
T ss_pred HHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCC---eec-CCHHHHh--cCCC
Confidence 345566889999999999985 788888888788899999999988887765 3432 223 3333332 3799
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|+-.- +.. ..++...+.|+|+|++++.
T Consensus 237 ~vid~~-----g~~---~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 237 FIISTI-----PTH---YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEEECC-----CSC---CCHHHHHTTEEEEEEEEEC
T ss_pred EEEECC-----CcH---HHHHHHHHHHhcCCEEEEE
Confidence 998642 211 2466677899999999874
No 310
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.08 E-value=0.0025 Score=52.42 Aligned_cols=114 Identities=9% Similarity=0.045 Sum_probs=76.4
Q ss_pred HHHHHHcCCCCCCEEEEECCCchHHHHHHHHc--------cCCEEEEEc-----CCHH-------------------HHH
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ--------TGCKYTGIT-----LSEE-------------------QLK 71 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--------~~~~v~gvd-----~s~~-------------------~~~ 71 (272)
..+.+++.--+| .|+|+|+-.|..+..+++. +..+++++| +.+. ..+
T Consensus 60 ~~l~~~i~~vpG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~ 138 (257)
T 3tos_A 60 DALYRQVLDVPG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPA 138 (257)
T ss_dssp HHHHHHTTTSCS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHH
T ss_pred HHHHHHhhCCCC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHH
Confidence 355555443455 8999999999988887652 347899999 3210 011
Q ss_pred HHHHHH------HHcCC-CCCeEEEEcccCCCC-------CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 72 YAEIKV------REAGL-QDHIRFYLCDYRQLP-------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 72 ~a~~~~------~~~g~-~~~i~~~~~d~~~~~-------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
..++.+ +..+. .++++++.|++.+.- +..++|+|....-. - +.....++.+...|+|||.++
T Consensus 139 ~l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y--~~t~~~le~~~p~l~~GGvIv 214 (257)
T 3tos_A 139 YLKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--Y--EPTKAVLEAIRPYLTKGSIVA 214 (257)
T ss_dssp HHHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--H--HHHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--c--chHHHHHHHHHHHhCCCcEEE
Confidence 122211 12344 478999999986632 23579999987632 1 344678999999999999999
Q ss_pred EEeec
Q 024096 138 LQFIS 142 (272)
Q Consensus 138 i~~~~ 142 (272)
+.++.
T Consensus 215 ~DD~~ 219 (257)
T 3tos_A 215 FDELD 219 (257)
T ss_dssp ESSTT
T ss_pred EcCCC
Confidence 97764
No 311
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.05 E-value=0.0029 Score=55.50 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=70.5
Q ss_pred HHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-----CC--
Q 024096 27 IEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-----LP-- 97 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-----~~-- 97 (272)
+....+++|++||-+|+|. |.++..+++..++ +|+++|.+++..+.+++. |. ..+...-.+ +.
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----Ga----~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----GF----EIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TC----EEEETTSSSCHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----CC----cEEccCCcchHHHHHHHH
Confidence 3466788999999999875 7888888887777 899999999888887653 43 223221111 11
Q ss_pred -CCCCccEEEEechhh---------ccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIE---------HVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~---------~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-.-... |. .+....++...+.|+++|++++.
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKH--EAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGS--BCTTHHHHHHHHHEEEEEEEEEC
T ss_pred hCCCCCCEEEECCCCcccccccccccc--cchHHHHHHHHHHHhcCCEEEEe
Confidence 224699998754321 11 11235788888999999999863
No 312
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.03 E-value=0.0029 Score=54.65 Aligned_cols=98 Identities=23% Similarity=0.274 Sum_probs=68.2
Q ss_pred HHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc---cCC----CC
Q 024096 27 IEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD---YRQ----LP 97 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d---~~~----~~ 97 (272)
++...+.+|++||-+|+|. |..+..+++..++ +|+++|.++...+.+++. |.. .++..+ ..+ +.
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----GAD---LVLQISKESPQEIARKVE 236 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS---EEEECSSCCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEEcCcccccchHHHHHH
Confidence 4667889999999999985 7888888887787 999999999888777643 432 233221 011 11
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-. .+. ...++...+.|+|+|++++.
T Consensus 237 ~~~~~g~D~vid~-----~g~---~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 237 GQLGCKPEVTIEC-----TGA---EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHTSCCSEEEEC-----SCC---HHHHHHHHHHSCTTCEEEEC
T ss_pred HHhCCCCCEEEEC-----CCC---hHHHHHHHHHhcCCCEEEEE
Confidence 11569999864 221 24567788899999999863
No 313
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.00 E-value=0.002 Score=55.25 Aligned_cols=99 Identities=14% Similarity=0.198 Sum_probs=69.5
Q ss_pred HHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CC
Q 024096 26 LIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KA 99 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~ 99 (272)
.++...+.+|++||-+|+|. |..+..+++..+++|+++|.+++..+.+++. |.. .++..+-.+.. ..
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL----GAE---VAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TCS---EEEETTTSCHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc----CCC---EEEeCCCcCHHHHHHHhC
Confidence 44666788999999999984 8889999988888999999999988877653 432 22222111111 11
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+.+|+|+... +. ...++.+.+.|+++|++++.
T Consensus 231 g~~d~vid~~-----g~---~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 231 GGAHGVLVTA-----VS---PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SSEEEEEESS-----CC---HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEEeC-----CC---HHHHHHHHHHhccCCEEEEe
Confidence 3688887542 11 35677888899999999873
No 314
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.99 E-value=0.0029 Score=55.92 Aligned_cols=66 Identities=14% Similarity=0.101 Sum_probs=53.5
Q ss_pred CCCCCEEEEECCCchHHHHHHH-Hc-cC-CEEEEEcCCHHHHHHHHHHHHH--cCCC-CCeEEEEcccCCCC
Q 024096 32 VSKGQEVLDIGCGWGTLAIEIV-KQ-TG-CKYTGITLSEEQLKYAEIKVRE--AGLQ-DHIRFYLCDYRQLP 97 (272)
Q Consensus 32 ~~~~~~vLDiG~G~G~~~~~l~-~~-~~-~~v~gvd~s~~~~~~a~~~~~~--~g~~-~~i~~~~~d~~~~~ 97 (272)
++++..|+|+|++.|..+..++ +. +. .+|+++|++|...+..++++.. ++.. +++++++.-+.+-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~~~ 295 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGENT 295 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECSSC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEECCC
Confidence 4788999999999999999888 43 32 7999999999999999999987 3322 58888877665543
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.97 E-value=0.006 Score=53.03 Aligned_cols=98 Identities=19% Similarity=0.246 Sum_probs=69.3
Q ss_pred HHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC--------
Q 024096 27 IEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-------- 96 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-------- 96 (272)
++...+.+|++||-+|+|. |..+..+++..|+ +|+++|.++...+.+++. |.. .++...-.+.
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~i~~~~ 247 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATVDPSAGDVVEAIAGPV 247 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTSSCHHHHHHSTT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEECCCCcCHHHHHHhhh
Confidence 4677889999999999974 7788888888787 999999999888887764 432 2222111111
Q ss_pred -CCCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 97 -PKANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 97 -~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
...+.+|+|+-. .+. ...++.+.+.|+++|++++.
T Consensus 248 ~~~~gg~Dvvid~-----~G~---~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 248 GLVPGGVDVVIEC-----AGV---AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp SSSTTCEEEEEEC-----SCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred hccCCCCCEEEEC-----CCC---HHHHHHHHHHhccCCEEEEE
Confidence 112379999863 221 35677888899999999874
No 316
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.97 E-value=0.022 Score=48.78 Aligned_cols=158 Identities=9% Similarity=0.081 Sum_probs=102.1
Q ss_pred CCCEEEEECCCchHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcC----------------------CCCCeEEE
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ--TGCKYTGITLSEEQLKYAEIKVREAG----------------------LQDHIRFY 89 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~g----------------------~~~~i~~~ 89 (272)
+...|+-+|||.=.....+... .+.+++=+|. |+.++.=++.+...+ ..++.+.+
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4579999999988888887764 3667888886 666666555554311 13578999
Q ss_pred EcccCCCC-----------CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccccccCcchhh
Q 024096 90 LCDYRQLP-----------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYDEYRLSPGFI 158 (272)
Q Consensus 90 ~~d~~~~~-----------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 158 (272)
.+|+.+.. ..+..-++++-.++.+++.+....+++.+.+... +|.+++-+...+.+.+... ....+
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d~fg~~--M~~~l 245 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGDRFGQI--MIENL 245 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTSHHHHH--HHHHH
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCCHHHHH--HHHHH
Confidence 99987631 1245568899999999999889999999998765 4555555666554432211 00111
Q ss_pred hhccc--CC-CCCCCHHHHHHHhhcCCCcEEEEEEecCccH
Q 024096 159 KEYIF--PG-GCLPSLGRVTSAMTSSSGLCVEHLENIGIHY 196 (272)
Q Consensus 159 ~~~~~--p~-~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~~ 196 (272)
...-. ++ ..+++.++..+.+ .++||......++..-|
T Consensus 246 ~~~g~pl~sl~~y~t~~~~~~r~-~~~Gw~~~~~~d~~~~~ 285 (334)
T 3iei_A 246 RRRQCDLAGVETCKSLESQKERL-LSNGWETASAVDMMELY 285 (334)
T ss_dssp HTTTCCCTTGGGGGCHHHHHHHH-HTTTCSEEEEEEHHHHH
T ss_pred HHhCCCCcccccCCCHHHHHHHH-HHcCCCcceeecHHHHH
Confidence 11111 11 1346667776555 46999988777765444
No 317
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.96 E-value=0.0032 Score=54.27 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=70.0
Q ss_pred HHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC------
Q 024096 26 LIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------ 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------ 97 (272)
.++...+++|++||-+|+|. |..+..+++..++ +|+++|.++...+.+++. |.. .++..+-.+..
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT---DIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC---EEECGGGSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc---eEEcCCCcCHHHHHHHH
Confidence 45777889999999999984 7788888888777 899999999888887764 431 23322111111
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-. .+. ...++.+.+.|+|+|++++.
T Consensus 231 t~g~g~D~v~d~-----~g~---~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 231 TDGKGVDKVVIA-----GGD---VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp TTTCCEEEEEEC-----SSC---TTHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCCEEEEC-----CCC---hHHHHHHHHHHhcCCEEEEe
Confidence 23469999863 221 24667788899999999874
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.86 E-value=0.0066 Score=47.59 Aligned_cols=93 Identities=23% Similarity=0.246 Sum_probs=62.8
Q ss_pred HHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--------
Q 024096 28 EKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------- 97 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------- 97 (272)
+...+.++++||..|+ |.|.....++...|++|++++.+++..+.+++ .|. . ... |..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~-~~~--d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGV--E-YVG--DSRSVDFADEILEL 102 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCC--S-EEE--ETTCSTHHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC--C-EEe--eCCcHHHHHHHHHH
Confidence 4457889999999994 46666666666668899999999887766543 242 1 222 322211
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
....+|+|+.+. + ...++.+.+.|+|+|++++
T Consensus 103 ~~~~~~D~vi~~~-----g----~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 103 TDGYGVDVVLNSL-----A----GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp TTTCCEEEEEECC-----C----THHHHHHHHTEEEEEEEEE
T ss_pred hCCCCCeEEEECC-----c----hHHHHHHHHHhccCCEEEE
Confidence 124699998643 2 1356778889999999986
No 319
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.85 E-value=0.0038 Score=54.10 Aligned_cols=97 Identities=21% Similarity=0.150 Sum_probs=68.3
Q ss_pred HHcCCCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------CC
Q 024096 28 EKARVSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------KA 99 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------~~ 99 (272)
+...+++|++||-+|+|. |..+..+++..|++|++++.++...+.+++. |.. .++..+..++. ..
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GAD---HGINRLEEDWVERVYALTGD 255 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCC---EEEcCCcccHHHHHHHHhCC
Confidence 566788999999999884 7788888887889999999999888887654 432 23332211211 23
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
..+|+|+-.-. . ..+..+.+.|+++|++++..
T Consensus 256 ~g~D~vid~~g-----~----~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 256 RGADHILEIAG-----G----AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CCEEEEEEETT-----S----SCHHHHHHHEEEEEEEEEEC
T ss_pred CCceEEEECCC-----h----HHHHHHHHHhhcCCEEEEEe
Confidence 47999986533 1 23556777899999998753
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.80 E-value=0.01 Score=51.02 Aligned_cols=98 Identities=24% Similarity=0.303 Sum_probs=68.0
Q ss_pred HHHcCCCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc-CCCC-------
Q 024096 27 IEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY-RQLP------- 97 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~-~~~~------- 97 (272)
++...+.+|++||-+|+|. |..+..+++..+++|++++.+++..+.+++ .|.. .++..+- .+..
T Consensus 161 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 161 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHh
Confidence 4666788999999999874 777888888778899999999988887764 3432 2222210 1111
Q ss_pred C---CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 K---ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ~---~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
. ...+|+|+-. .+. ...++...+.|+++|++++.
T Consensus 234 ~~~~g~g~D~vid~-----~g~---~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 234 RSAIGDLPNVTIDC-----SGN---EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHSSSCCSEEEEC-----SCC---HHHHHHHHHHSCTTCEEEEC
T ss_pred ccccCCCCCEEEEC-----CCC---HHHHHHHHHHHhcCCEEEEE
Confidence 1 2469999864 221 24567778899999999873
No 321
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.74 E-value=0.005 Score=53.26 Aligned_cols=100 Identities=18% Similarity=0.190 Sum_probs=70.5
Q ss_pred HHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCCE-EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc------cCC-C
Q 024096 26 LIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGCK-YTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD------YRQ-L 96 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~-v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d------~~~-~ 96 (272)
.++...+.+|++||-+|+|. |..+..+++..|++ |+++|.+++..+.+++. . +.+..+..+ +.+ +
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-----~~~~~~~~~~~~~~~~~~~v 244 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-----PEVVTHKVERLSAEESAKKI 244 (363)
T ss_dssp HHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-----TTCEEEECCSCCHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-----hhcccccccccchHHHHHHH
Confidence 34677889999999999874 77888888887886 99999999999888765 2 122222221 111 1
Q ss_pred ---CCCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 97 ---PKANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 97 ---~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.....+|+|+-. .+. ...++.+.+.|+++|++++.
T Consensus 245 ~~~t~g~g~Dvvid~-----~g~---~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 245 VESFGGIEPAVALEC-----TGV---ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHTSSCCCSEEEEC-----SCC---HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHhCCCCCCEEEEC-----CCC---hHHHHHHHHHhcCCCEEEEE
Confidence 123579999864 322 34677788899999999874
No 322
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.72 E-value=0.0051 Score=52.74 Aligned_cols=100 Identities=14% Similarity=0.092 Sum_probs=67.3
Q ss_pred HHHHHHcCCCCCCEEEEECCC--chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----
Q 024096 24 SVLIEKARVSKGQEVLDIGCG--WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---- 97 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G--~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---- 97 (272)
..+.+...+++|++||-+|+| .|..+..+++..|++|++++.+++..+.+++. |.. .++...-.+..
T Consensus 134 ~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga~---~~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 134 VTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GAA---YVIDTSTAPLYETVM 206 (340)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEETTTSCHHHHHH
T ss_pred HHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CCc---EEEeCCcccHHHHHH
Confidence 344566788999999999986 67788888887789999999998888877653 431 22222111111
Q ss_pred ---CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 ---KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ---~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-.- +.. . .....+.|+++|++++.
T Consensus 207 ~~~~~~g~Dvvid~~-----g~~---~-~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 207 ELTNGIGADAAIDSI-----GGP---D-GNELAFSLRPNGHFLTI 242 (340)
T ss_dssp HHTTTSCEEEEEESS-----CHH---H-HHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCcEEEECC-----CCh---h-HHHHHHHhcCCCEEEEE
Confidence 234799998643 222 1 22344789999999873
No 323
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.68 E-value=0.0059 Score=53.10 Aligned_cols=96 Identities=19% Similarity=0.252 Sum_probs=66.7
Q ss_pred HHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc----cCCCCCCC
Q 024096 26 LIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD----YRQLPKAN 100 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d----~~~~~~~~ 100 (272)
.+....+++|++||-+|+|. |..+..+++..+++|++++.+++..+.+++. |.. .++... ..++ ..
T Consensus 186 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~--~~ 256 (369)
T 1uuf_A 186 PLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL----GAD---EVVNSRNADEMAAH--LK 256 (369)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS---EEEETTCHHHHHTT--TT
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEeccccHHHHHHh--hc
Confidence 34456788999999999984 7788888887788999999999888887653 431 222211 1111 15
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.+|+|+-.-.. ...++...+.|+++|+++.
T Consensus 257 g~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 257 SFDFILNTVAA--------PHNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp CEEEEEECCSS--------CCCHHHHHTTEEEEEEEEE
T ss_pred CCCEEEECCCC--------HHHHHHHHHHhccCCEEEE
Confidence 79999864321 1235567789999999886
No 324
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.65 E-value=0.023 Score=49.85 Aligned_cols=97 Identities=15% Similarity=0.117 Sum_probs=63.6
Q ss_pred CCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------CCCC
Q 024096 31 RVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------KANK 101 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------~~~~ 101 (272)
.+.+|++||=+|+|. |..+..+++..++ +|+++|.++...+.+++. |.. .++..+-.+.. ....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD---HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEEcCCCCCHHHHHHHHhCCCC
Confidence 678999999999873 7788888887787 999999999988888754 421 23322111111 2347
Q ss_pred ccEEEEechhhccChh--hHHHHHHHHHhcCccCcEEEEE
Q 024096 102 YDRIISCGMIEHVGHD--YMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|+|+-. .+.. .....++.+.+.++++|++++.
T Consensus 283 ~D~vid~-----~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 283 AKLFLEA-----TGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CSEEEEC-----SSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCEEEEC-----CCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 9999864 2222 1223333334555999999873
No 325
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.63 E-value=0.0098 Score=50.81 Aligned_cols=103 Identities=21% Similarity=0.307 Sum_probs=69.7
Q ss_pred HHHHHHHHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--
Q 024096 22 KVSVLIEKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-- 97 (272)
Q Consensus 22 ~~~~l~~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-- 97 (272)
.+..+.+...+.+|++||-.|+ |.|..+..+++..+++|++++.+++..+.+.+ ..|.. .++...-.+..
T Consensus 137 A~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 137 AYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGFD---GAIDYKNEDLAAG 210 (336)
T ss_dssp HHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCCS---EEEETTTSCHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCC---EEEECCCHHHHHH
Confidence 3444557778899999999998 56788888887778899999999987777622 22431 22221111111
Q ss_pred ----CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 ----KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ----~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+.+|+|+.+ .+ ...++.+.+.|+++|++++.
T Consensus 211 ~~~~~~~~~d~vi~~-----~g----~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 211 LKRECPKGIDVFFDN-----VG----GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHHCTTCEEEEEES-----SC----HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHhcCCCceEEEEC-----CC----cchHHHHHHHHhhCCEEEEE
Confidence 12469998864 32 13677788999999999873
No 326
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.59 E-value=0.0078 Score=52.41 Aligned_cols=99 Identities=20% Similarity=0.303 Sum_probs=69.0
Q ss_pred HHHHcCCCCCCEEEEECCC-chHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc--cCCCC----
Q 024096 26 LIEKARVSKGQEVLDIGCG-WGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD--YRQLP---- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G-~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~~---- 97 (272)
+.+...+++|++||-+|+| .|..+..+++..++ +|+++|.+++..+.+++. |.. .++... -.++.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----GVN---EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----TCC---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---EEEccccCchhHHHHHH
Confidence 4566778899999999997 47788888887777 899999999888877643 432 222221 11111
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccC-cEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATH-GLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 139 (272)
..+.+|+|+-. .+. ...++.+.+.|++| |++++.
T Consensus 258 ~~~~gg~D~vid~-----~g~---~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 258 DLTDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHTTSCBSEEEEC-----SCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhcCCCCCEEEEC-----CCC---HHHHHHHHHHhhccCCEEEEE
Confidence 12379999864 322 35678888999997 999874
No 327
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.58 E-value=0.012 Score=51.08 Aligned_cols=99 Identities=19% Similarity=0.213 Sum_probs=67.9
Q ss_pred HHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc--CCCC----
Q 024096 26 LIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY--RQLP---- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~--~~~~---- 97 (272)
+.+...+.+|++||-+|+|. |..+..+++..++ +|+++|.++...+.+++ .|.. .++..+- .++.
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHH
Confidence 44566788999999999874 7788888887777 89999999988877764 3432 2222111 1111
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccC-cEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATH-GLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 139 (272)
..+.+|+|+-. .+. ...++...+.|+++ |++++.
T Consensus 256 ~~t~gg~Dvvid~-----~g~---~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 256 EKTNGGVDYAVEC-----AGR---IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHTTSCBSEEEEC-----SCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEEC-----CCC---HHHHHHHHHHHhcCCCEEEEE
Confidence 12379999854 221 35677888999999 999863
No 328
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.57 E-value=0.0062 Score=51.58 Aligned_cols=93 Identities=22% Similarity=0.311 Sum_probs=64.7
Q ss_pred HHHcCCCCCCEEEEECCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEE
Q 024096 27 IEKARVSKGQEVLDIGCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRI 105 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V 105 (272)
++...+++|++||-+|+| .|..+..+++..|++|++++ +++..+.+++. |. ..++. |..++ ...+|+|
T Consensus 135 l~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----Ga---~~v~~-d~~~v--~~g~Dvv 203 (315)
T 3goh_A 135 FEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----GV---RHLYR-EPSQV--TQKYFAI 203 (315)
T ss_dssp HTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----TE---EEEES-SGGGC--CSCEEEE
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----CC---CEEEc-CHHHh--CCCccEE
Confidence 367778899999999997 57888888888788999999 88888877653 42 22332 42223 4679998
Q ss_pred EEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 106 ISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+-. .+.+ .+..+.+.|+++|+++..
T Consensus 204 ~d~-----~g~~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDA-----VNSQ----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ECC----------------TTGGGEEEEEEEEEE
T ss_pred EEC-----CCch----hHHHHHHHhcCCCEEEEE
Confidence 853 2211 235678899999999874
No 329
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.55 E-value=0.018 Score=48.99 Aligned_cols=98 Identities=21% Similarity=0.187 Sum_probs=67.1
Q ss_pred HHHHcCCCCCCEEEEEC-C-CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC------
Q 024096 26 LIEKARVSKGQEVLDIG-C-GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------ 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG-~-G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------ 97 (272)
+.+...+++|++||-.| + |.|..+..+++..|++|++++.+++..+.+++. |.. .++..+-.+..
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GAW---ETIDYSHEDVAKRVLEL 204 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEeCCCccHHHHHHHH
Confidence 33445788999999998 3 467888888887788999999999888877653 421 22322211111
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+..-. . ..+....+.|+++|++++.
T Consensus 205 ~~~~g~Dvvid~~g-----~----~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 205 TDGKKCPVVYDGVG-----Q----DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp TTTCCEEEEEESSC-----G----GGHHHHHTTEEEEEEEEEC
T ss_pred hCCCCceEEEECCC-----h----HHHHHHHHHhcCCCEEEEE
Confidence 2347999986432 1 2456678899999999874
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.50 E-value=0.018 Score=49.88 Aligned_cols=99 Identities=16% Similarity=0.255 Sum_probs=67.9
Q ss_pred HHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc--CCCC----
Q 024096 26 LIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY--RQLP---- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~--~~~~---- 97 (272)
+.+...+++|++||-+|+|. |..+..+++..++ +|++++.++...+.+++. |.. .++..+- .++.
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~ 254 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLI 254 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHH
Confidence 34556788999999999874 7778888887777 899999999888887653 432 2222110 1111
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccC-cEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATH-GLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 139 (272)
..+.+|+|+-. .+. ...++.+.+.|+++ |++++.
T Consensus 255 ~~~~~g~D~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 255 EMTDGGVDYSFEC-----IGN---VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHTTSCBSEEEEC-----SCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEEC-----CCc---HHHHHHHHHhhccCCcEEEEE
Confidence 12379999854 221 34677888999999 999863
No 331
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.44 E-value=0.016 Score=50.36 Aligned_cols=99 Identities=19% Similarity=0.283 Sum_probs=67.6
Q ss_pred HHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc--CCCC----
Q 024096 26 LIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY--RQLP---- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~--~~~~---- 97 (272)
+.+...+.+|++||-+|+|. |..+..+++..++ +|+++|.+++..+.+++. |.. .++..+- .++.
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GAT---DFVNPNDHSEPISQVLS 256 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCC---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----CCc---eEEeccccchhHHHHHH
Confidence 34556788999999999874 7788888887787 899999999888877643 431 2222110 1111
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccC-cEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATH-GLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 139 (272)
..+.+|+|+-. .+. ...++.+.+.|+++ |++++.
T Consensus 257 ~~~~~g~D~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 257 KMTNGGVDFSLEC-----VGN---VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHTSCBSEEEEC-----SCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEEC-----CCC---HHHHHHHHHHhhcCCcEEEEE
Confidence 12379999864 221 34677888999999 999863
No 332
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.39 E-value=0.02 Score=49.68 Aligned_cols=99 Identities=17% Similarity=0.228 Sum_probs=67.3
Q ss_pred HHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc--CCCC----
Q 024096 26 LIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY--RQLP---- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~--~~~~---- 97 (272)
+.+...+.+|++||-+|+|. |..+..+++..++ +|++++.+++..+.+++. |.. .++..+- .++.
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~ 255 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GAT---ECVNPQDYKKPIQEVLT 255 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCc---eEecccccchhHHHHHH
Confidence 34556788999999999874 7778888887777 899999999888777542 431 2222111 1111
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccC-cEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATH-GLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 139 (272)
..+.+|+|+-. .+. ...++...+.|+++ |++++.
T Consensus 256 ~~~~~g~D~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 256 EMSNGGVDFSFEV-----IGR---LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHTTSCBSEEEEC-----SCC---HHHHHHHHHHBCTTTCEEEEC
T ss_pred HHhCCCCcEEEEC-----CCC---HHHHHHHHHHhhcCCcEEEEe
Confidence 12379999854 221 34667788899999 998863
No 333
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.39 E-value=0.021 Score=48.69 Aligned_cols=98 Identities=27% Similarity=0.415 Sum_probs=66.3
Q ss_pred HHHHHHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC---CC-
Q 024096 24 SVLIEKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ---LP- 97 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~---~~- 97 (272)
..+.+...+.++++||-.|+ |.|..+..+++..+++|++++.+++..+.+++ .|. . .. .|..+ ..
T Consensus 135 ~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~-~~--~d~~~~~~~~~ 205 (333)
T 1v3u_A 135 FGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGF--D-AA--FNYKTVNSLEE 205 (333)
T ss_dssp HHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--S-EE--EETTSCSCHHH
T ss_pred HHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--c-EE--EecCCHHHHHH
Confidence 33445667889999999997 56777777777678899999999887777633 232 1 12 23322 10
Q ss_pred -----CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -----KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -----~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+.+|+|+.+- +. ..++...+.|+++|++++.
T Consensus 206 ~~~~~~~~~~d~vi~~~-----g~----~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 206 ALKKASPDGYDCYFDNV-----GG----EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHHHCTTCEEEEEESS-----CH----HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhCCCCeEEEECC-----Ch----HHHHHHHHHHhcCCEEEEE
Confidence 124699988653 21 2467788999999999863
No 334
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.39 E-value=0.017 Score=49.22 Aligned_cols=96 Identities=21% Similarity=0.237 Sum_probs=65.6
Q ss_pred HHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------C
Q 024096 28 EKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------K 98 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------~ 98 (272)
+...+.+|++||-+|+ |.|..+..+++..|++|++++.+++..+.+++. |. ..++..+-.+.. .
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----GA---EYLINASKEDILRQVLKFTN 214 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC---SEEEETTTSCHHHHHHHHTT
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---cEEEeCCCchHHHHHHHHhC
Confidence 3457889999999994 467788888877789999999999888777553 42 123322212111 2
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
...+|+|+..-.- ..++.+.+.|+++|++++.
T Consensus 215 ~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 215 GKGVDASFDSVGK---------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp TSCEEEEEECCGG---------GGHHHHHHHEEEEEEEEEC
T ss_pred CCCceEEEECCCh---------HHHHHHHHHhccCCEEEEE
Confidence 3479999865321 3456677889999999874
No 335
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.38 E-value=0.0026 Score=54.67 Aligned_cols=93 Identities=24% Similarity=0.233 Sum_probs=64.8
Q ss_pred CCCCCCEEEEECCCc-hHHHHHHHHcc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc----cc-CCCCCCCCc
Q 024096 31 RVSKGQEVLDIGCGW-GTLAIEIVKQT--GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC----DY-RQLPKANKY 102 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~-G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~----d~-~~~~~~~~f 102 (272)
.+ +|++||-+|+|. |..+..+++.. +++|++++.+++..+.+++. |.. .++.. |. .++.....+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GAD---YVSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TCS---EEECHHHHHHHHHHHHTTCCE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CCC---EEeccccchHHHHHhhcCCCc
Confidence 67 999999999974 77788888876 99999999999888887653 431 22211 11 111123479
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
|+|+-. .+. ...++.+.+.|+++|++++.
T Consensus 240 D~vid~-----~g~---~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDL-----VGT---EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEES-----SCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred cEEEEC-----CCC---hHHHHHHHHHhhcCCEEEEe
Confidence 999864 221 24677788899999998863
No 336
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.34 E-value=0.012 Score=50.39 Aligned_cols=93 Identities=16% Similarity=0.298 Sum_probs=66.5
Q ss_pred CCCCCCEEEEECCCc-hHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------CCCC
Q 024096 31 RVSKGQEVLDIGCGW-GTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------KANK 101 (272)
Q Consensus 31 ~~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------~~~~ 101 (272)
.+.++++||-+|+|. |..+..+++. .+.+|+++|.+++..+.+++. |.. .++..+- +.. ....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----Ga~---~~i~~~~-~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----GAD---AAVKSGA-GAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----TCS---EEEECST-THHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CCC---EEEcCCC-cHHHHHHHHhCCCC
Confidence 678999999999975 7888888887 478999999999988887653 432 2232221 111 1237
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|+|+-. .+. ...++.+.+.|+++|++++.
T Consensus 240 ~d~v~d~-----~G~---~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 240 ATAVFDF-----VGA---QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEEEES-----SCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred CeEEEEC-----CCC---HHHHHHHHHHHhcCCEEEEE
Confidence 9998863 332 34778888999999999874
No 337
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.34 E-value=0.021 Score=49.78 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=55.9
Q ss_pred CEEEEECCCchHHHHHHHHccCCE-EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC---------CCCccEE
Q 024096 36 QEVLDIGCGWGTLAIEIVKQTGCK-YTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK---------ANKYDRI 105 (272)
Q Consensus 36 ~~vLDiG~G~G~~~~~l~~~~~~~-v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~---------~~~fD~V 105 (272)
.+++|+-||.|+++.-+.+. |.+ +.++|+++..++..+.+. ++..++++|+.++.. ...+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999998886 554 669999999888777663 256788999988751 3579999
Q ss_pred EEechhhc
Q 024096 106 ISCGMIEH 113 (272)
Q Consensus 106 ~~~~~~~~ 113 (272)
+.......
T Consensus 76 ~ggpPCQ~ 83 (376)
T 3g7u_A 76 IGGPPCQG 83 (376)
T ss_dssp EECCCCCT
T ss_pred EecCCCCC
Confidence 98765443
No 338
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.33 E-value=0.013 Score=51.04 Aligned_cols=99 Identities=20% Similarity=0.219 Sum_probs=67.2
Q ss_pred HHHHcC-CCCCCEEEEECCC-chHHHHHHHHccC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc---cCC----
Q 024096 26 LIEKAR-VSKGQEVLDIGCG-WGTLAIEIVKQTG-CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD---YRQ---- 95 (272)
Q Consensus 26 l~~~l~-~~~~~~vLDiG~G-~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d---~~~---- 95 (272)
.++... +.+|++||-+|+| .|..+..+++..+ .+|++++.+++..+.+++ .|.. .++..+ -.+
T Consensus 186 al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~ 258 (380)
T 1vj0_A 186 AFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKA 258 (380)
T ss_dssp HHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHH
Confidence 345667 8899999999977 5777888888778 599999999988887764 3431 233221 011
Q ss_pred C---CCCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 96 L---PKANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 96 ~---~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+ .....+|+|+-.- +. ...++...+.|+++|++++.
T Consensus 259 v~~~~~g~g~Dvvid~~-----g~---~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 259 IMDITHGRGADFILEAT-----GD---SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHHTTTSCEEEEEECS-----SC---TTHHHHHHHHEEEEEEEEEC
T ss_pred HHHHhCCCCCcEEEECC-----CC---HHHHHHHHHHHhcCCEEEEE
Confidence 1 1223699998642 21 23566778889999999863
No 339
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.33 E-value=0.019 Score=49.90 Aligned_cols=99 Identities=20% Similarity=0.242 Sum_probs=67.6
Q ss_pred HHHHcCCCCCCEEEEECCC-chHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc--CCCC----
Q 024096 26 LIEKARVSKGQEVLDIGCG-WGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY--RQLP---- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G-~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~--~~~~---- 97 (272)
+.+...+.+|++||-+|+| .|..+..+++..++ +|+++|.+++..+.+++. |.. .++..+- .++.
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~v~ 259 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----GAT---DCLNPRELDKPVQDVIT 259 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCc---EEEccccccchHHHHHH
Confidence 4456678899999999987 47788888887787 899999999888777543 431 2222110 1111
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccC-cEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATH-GLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 139 (272)
..+.+|+|+-. .+. ...++.+.+.|+++ |++++.
T Consensus 260 ~~~~~g~Dvvid~-----~G~---~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 260 ELTAGGVDYSLDC-----AGT---AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHHTSCBSEEEES-----SCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCccEEEEC-----CCC---HHHHHHHHHHhhcCCCEEEEE
Confidence 12379999853 321 35677888999999 999863
No 340
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.30 E-value=0.0061 Score=52.05 Aligned_cols=73 Identities=12% Similarity=0.133 Sum_probs=54.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC
Q 024096 21 RKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP 97 (272)
Q Consensus 21 ~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~ 97 (272)
..+..+++.. ..+|+.|||.-||+|..+....+. +.+.+|+|+++...+.++++++..+. ....++.|+.+++
T Consensus 240 ~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~-gr~~ig~e~~~~~~~~~~~r~~~~~~--~~~~~~~~~~~i~ 312 (323)
T 1boo_A 240 KLPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERE-SRKWISFEMKPEYVAASAFRFLDNNI--SEEKITDIYNRIL 312 (323)
T ss_dssp HHHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHGGGSCSCS--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHc-CCCEEEEeCCHHHHHHHHHHHHhccc--chHHHHHHHHHHH
Confidence 3445566554 468899999999999999887775 89999999999999999998765543 2344444444433
No 341
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.28 E-value=0.012 Score=50.51 Aligned_cols=96 Identities=21% Similarity=0.266 Sum_probs=67.5
Q ss_pred HHHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------
Q 024096 27 IEKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------- 97 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------- 97 (272)
.+...+++|++||-.|+ |.|..+..+++..|++|++++.+++..+.+++. |.. .++..+ .+..
T Consensus 152 ~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~---~v~~~~-~~~~~~v~~~~ 223 (342)
T 4eye_A 152 ARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GAD---IVLPLE-EGWAKAVREAT 223 (342)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS---EEEESS-TTHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc---EEecCc-hhHHHHHHHHh
Confidence 35667889999999997 468888888888889999999998888777653 431 233222 2211
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-.-.. ..++.+.+.|+++|++++.
T Consensus 224 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 224 GGAGVDMVVDPIGG---------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp TTSCEEEEEESCC-----------CHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCch---------hHHHHHHHhhcCCCEEEEE
Confidence 22479999864321 2456777899999999874
No 342
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.23 E-value=0.039 Score=47.49 Aligned_cols=94 Identities=27% Similarity=0.286 Sum_probs=64.5
Q ss_pred HHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--------
Q 024096 28 EKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------- 97 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------- 97 (272)
+...++++++||-.|+ |.|..+..+++..|++|++++.+++..+.+++ .|.. .++ |..+..
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~--d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGAH---EVF--NHREVNYIDKIKKY 234 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEE--ETTSTTHHHHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCCC---EEE--eCCCchHHHHHHHH
Confidence 4567889999999996 56777777777778999999999987776543 2421 222 222211
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+.+-. ...+....+.|+++|++++.
T Consensus 235 ~~~~~~D~vi~~~G---------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 235 VGEKGIDIIIEMLA---------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HCTTCEEEEEESCH---------HHHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCcEEEEECCC---------hHHHHHHHHhccCCCEEEEE
Confidence 1247999986532 12456678899999999863
No 343
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.21 E-value=0.028 Score=48.53 Aligned_cols=98 Identities=24% Similarity=0.340 Sum_probs=67.3
Q ss_pred HHHHcCCCCCCEEEEEC--CCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC------
Q 024096 26 LIEKARVSKGQEVLDIG--CGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------ 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG--~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------ 97 (272)
+.+...+++|++||-.| .|.|..+..+++..+++|++++.+++..+.+++ .|.. .++..+-.+..
T Consensus 155 l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~ 227 (362)
T 2c0c_A 155 LKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQE 227 (362)
T ss_dssp HHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHh
Confidence 33455788999999999 457888888888778899999999888777764 3431 22222211111
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-.- +. ..++.+.+.|+++|++++.
T Consensus 228 ~~~g~D~vid~~-----g~----~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 228 YPEGVDVVYESV-----GG----AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp CTTCEEEEEECS-----CT----HHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCEEEECC-----CH----HHHHHHHHHHhcCCEEEEE
Confidence 124689998643 21 3567788899999998863
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.20 E-value=0.018 Score=49.41 Aligned_cols=97 Identities=18% Similarity=0.154 Sum_probs=65.9
Q ss_pred HHHcCCCCCCEEEEECCC-chHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------
Q 024096 27 IEKARVSKGQEVLDIGCG-WGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------- 97 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~G-~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------- 97 (272)
++..++ +|++||-+|+| .|..+..+++..++ +|++++.+++..+.+++. |.. .++..+-.++.
T Consensus 161 l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 161 VLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD---YVINPFEEDVVKEVMDIT 232 (348)
T ss_dssp HTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHT
T ss_pred HHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEECCCCcCHHHHHHHHc
Confidence 355677 99999999986 47777888877787 899999999888877643 431 22221111111
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+..-. . ...++.+.+.|+++|+++..
T Consensus 233 ~g~g~D~vid~~g-----~---~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 233 DGNGVDVFLEFSG-----A---PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp TTSCEEEEEECSC-----C---HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCEEEECCC-----C---HHHHHHHHHHHhcCCEEEEE
Confidence 1236999986422 1 35667788899999998863
No 345
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.20 E-value=0.019 Score=49.22 Aligned_cols=99 Identities=23% Similarity=0.375 Sum_probs=67.2
Q ss_pred HHHHcCCCCCCEEEEECCC--chHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC----C-
Q 024096 26 LIEKARVSKGQEVLDIGCG--WGTLAIEIVKQT-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL----P- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G--~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~----~- 97 (272)
.+....++++++||-.|+| .|..+..+++.. +++|+++|.+++..+.+++. |.. .++...-.+. .
T Consensus 162 ~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~ 234 (347)
T 1jvb_A 162 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD---YVINASMQDPLAEIRR 234 (347)
T ss_dssp HHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCC---EEecCCCccHHHHHHH
Confidence 3455778899999999987 566777777776 99999999999888777543 321 2222111111 1
Q ss_pred -CC-CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KA-NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~-~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.. +.+|+|+..- +. ...++...+.|+++|++++.
T Consensus 235 ~~~~~~~d~vi~~~-----g~---~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 235 ITESKGVDAVIDLN-----NS---EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp HTTTSCEEEEEESC-----CC---HHHHTTGGGGEEEEEEEEEC
T ss_pred HhcCCCceEEEECC-----CC---HHHHHHHHHHHhcCCEEEEE
Confidence 11 4799988642 21 34677788999999998863
No 346
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.19 E-value=0.04 Score=47.21 Aligned_cols=98 Identities=18% Similarity=0.306 Sum_probs=67.2
Q ss_pred HHHHHcCCC------CCCEEEEE-CCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC
Q 024096 25 VLIEKARVS------KGQEVLDI-GCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL 96 (272)
Q Consensus 25 ~l~~~l~~~------~~~~vLDi-G~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 96 (272)
.+.+...+. +|++||-+ |+| .|..+..+++..|++|++++.+++..+.+++. |.. .++..+ .+.
T Consensus 135 ~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~-~~~ 206 (346)
T 3fbg_A 135 TLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GAD---IVLNHK-ESL 206 (346)
T ss_dssp HHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TCS---EEECTT-SCH
T ss_pred HHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc---EEEECC-ccH
Confidence 344566676 89999999 454 67788888887889999999999888887763 421 222111 111
Q ss_pred C------CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 97 P------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 97 ~------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
. ....+|+|+-. .+. ...++.+.+.|+++|+++.
T Consensus 207 ~~~~~~~~~~g~Dvv~d~-----~g~---~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 207 LNQFKTQGIELVDYVFCT-----FNT---DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HHHHHHHTCCCEEEEEES-----SCH---HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHhCCCCccEEEEC-----CCc---hHHHHHHHHHhccCCEEEE
Confidence 1 23579998863 221 3566778889999999975
No 347
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.18 E-value=0.0088 Score=50.95 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHccCCEEEEEcCCH---HHHHHHHHHHHHcC
Q 024096 20 MRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSE---EQLKYAEIKVREAG 81 (272)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~---~~~~~a~~~~~~~g 81 (272)
...++.+++... .+|+.|||.-||+|..+....+. +.+.+|+|+++ ..++.++++++..+
T Consensus 229 ~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 445566776654 68899999999999999987775 88999999999 99999999876543
No 348
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.16 E-value=0.016 Score=49.52 Aligned_cols=71 Identities=14% Similarity=0.100 Sum_probs=54.7
Q ss_pred CCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccEEEEechh
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDRIISCGMI 111 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~V~~~~~~ 111 (272)
+.+++|+.||.|+++.-+.+. |. .+.++|+++..++..+.+... .. ++|+.++. .-..+|+|+.....
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~-----~~---~~Di~~~~~~~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGE-----KP---EGDITQVNEKTIPDHDILCAGFPC 81 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSC-----CC---BSCGGGSCGGGSCCCSEEEEECCC
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCC-----CC---cCCHHHcCHhhCCCCCEEEECCCC
Confidence 579999999999999998886 54 577899999998888887632 11 68888776 22469999998655
Q ss_pred hcc
Q 024096 112 EHV 114 (272)
Q Consensus 112 ~~~ 114 (272)
..+
T Consensus 82 Q~f 84 (327)
T 2c7p_A 82 QAF 84 (327)
T ss_dssp TTT
T ss_pred CCc
Confidence 444
No 349
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.16 E-value=0.017 Score=49.91 Aligned_cols=101 Identities=18% Similarity=0.193 Sum_probs=66.4
Q ss_pred HHHHcCCCCCCEEEEECCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccC-CCC--CCCC
Q 024096 26 LIEKARVSKGQEVLDIGCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYR-QLP--KANK 101 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~-~~~--~~~~ 101 (272)
.+...++.+|++||-+|+| .|..+..+++..+++|++++.++...+.+++. |.. .++..+-. +.. -.+.
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~~~ 243 (360)
T 1piw_A 171 PLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GAD---HYIATLEEGDWGEKYFDT 243 (360)
T ss_dssp HHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEEGGGTSCHHHHSCSC
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----CCC---EEEcCcCchHHHHHhhcC
Confidence 3445788899999999986 47778888877788999999998888877653 431 22322111 111 1147
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|+|+-.-... + ...++.+.+.|+++|+++..
T Consensus 244 ~D~vid~~g~~--~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 244 FDLIVVCASSL--T----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEEEECCSCS--T----TCCTTTGGGGEEEEEEEEEC
T ss_pred CCEEEECCCCC--c----HHHHHHHHHHhcCCCEEEEe
Confidence 99998653320 0 12344567889999998863
No 350
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.12 E-value=0.024 Score=48.79 Aligned_cols=97 Identities=23% Similarity=0.246 Sum_probs=66.3
Q ss_pred HHHcCCCCCCEEEEEC--CCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC------C
Q 024096 27 IEKARVSKGQEVLDIG--CGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------K 98 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG--~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------~ 98 (272)
.+...++++++||-.| .|.|..+..+++..|++|++++.+++..+.+++. |.. .++..+-.+.. .
T Consensus 160 ~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 160 FQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAK---RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp TTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEeCCchHHHHHHHHHh
Confidence 3556788999999995 3467788888887889999999999988887653 421 22222211111 1
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
...+|+|+..-. . ..+....+.|+++|++++.
T Consensus 233 ~~g~Dvvid~~g-----~----~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 233 GQGVDIILDMIG-----A----AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp SSCEEEEEESCC-----G----GGHHHHHHTEEEEEEEEEC
T ss_pred CCCceEEEECCC-----H----HHHHHHHHHhccCCEEEEE
Confidence 246999886432 2 2456677889999998873
No 351
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.06 E-value=0.0055 Score=52.79 Aligned_cols=72 Identities=11% Similarity=0.110 Sum_probs=54.9
Q ss_pred CEEEEECCCchHHHHHHHHccC---CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC----CCCccEEEEe
Q 024096 36 QEVLDIGCGWGTLAIEIVKQTG---CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----ANKYDRIISC 108 (272)
Q Consensus 36 ~~vLDiG~G~G~~~~~l~~~~~---~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----~~~fD~V~~~ 108 (272)
.+|+|+.||.|+++.-+.+. | ..+.++|+++..++..+.+.. ...++++|+.++.. ...+|+|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 58999999999999998886 4 368999999999988888752 34578899988762 1269999998
Q ss_pred chhhcc
Q 024096 109 GMIEHV 114 (272)
Q Consensus 109 ~~~~~~ 114 (272)
.....+
T Consensus 76 pPCq~f 81 (343)
T 1g55_A 76 PPCQPF 81 (343)
T ss_dssp CC----
T ss_pred CCCcch
Confidence 764433
No 352
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.05 E-value=0.041 Score=47.05 Aligned_cols=99 Identities=20% Similarity=0.312 Sum_probs=67.5
Q ss_pred HHHHHHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC---CC-
Q 024096 24 SVLIEKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ---LP- 97 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~---~~- 97 (272)
..+.+..++.+|++||-.|+ |.|..+..+++..+++|++++.++...+.+++. .|.. .++ |..+ ..
T Consensus 145 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~~~~~ 216 (345)
T 2j3h_A 145 AGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFD---DAF--NYKEESDLTA 216 (345)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCS---EEE--ETTSCSCSHH
T ss_pred HHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCCHHHHHH
Confidence 33445667889999999997 577777888877788999999998877776532 2321 222 3221 11
Q ss_pred -----CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -----KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -----~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+.+- + ...++...+.|+++|++++.
T Consensus 217 ~~~~~~~~~~d~vi~~~-----g----~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 217 ALKRCFPNGIDIYFENV-----G----GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHHHHCTTCEEEEEESS-----C----HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhCCCCcEEEECC-----C----HHHHHHHHHHHhcCCEEEEE
Confidence 124689988642 2 13677788899999999863
No 353
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.99 E-value=0.073 Score=46.37 Aligned_cols=79 Identities=11% Similarity=0.221 Sum_probs=49.7
Q ss_pred HHcCCCCCCEEEEECCCchHHHHHHHHc--------cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCC
Q 024096 28 EKARVSKGQEVLDIGCGWGTLAIEIVKQ--------TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~--------~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 99 (272)
+.+.....-.|+|+|.|.|.++..+.+. ...+++.||+|+...+.=++++... +++.+. .++.++|.
T Consensus 74 ~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~---~~v~W~-~~l~~lp~- 148 (387)
T 1zkd_A 74 KAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI---RNIHWH-DSFEDVPE- 148 (387)
T ss_dssp HHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC---SSEEEE-SSGGGSCC-
T ss_pred HHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC---CCeEEe-CChhhcCC-
Confidence 3455455568999999999998877643 1348999999999888666555332 245544 23444441
Q ss_pred CCccEEEEechhh
Q 024096 100 NKYDRIISCGMIE 112 (272)
Q Consensus 100 ~~fD~V~~~~~~~ 112 (272)
..-+|++++.+.
T Consensus 149 -~~~~viANE~fD 160 (387)
T 1zkd_A 149 -GPAVILANEYFD 160 (387)
T ss_dssp -SSEEEEEESSGG
T ss_pred -CCeEEEeccccc
Confidence 133555555443
No 354
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=95.98 E-value=0.022 Score=48.26 Aligned_cols=96 Identities=18% Similarity=0.288 Sum_probs=65.3
Q ss_pred HHcCCCCCC-EEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEE-cccCCCC--CCCC
Q 024096 28 EKARVSKGQ-EVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYL-CDYRQLP--KANK 101 (272)
Q Consensus 28 ~~l~~~~~~-~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~-~d~~~~~--~~~~ 101 (272)
.+..+.++. +||=.|+ |.|..+..+++..|++|++++.+++..+.+++. |.. .++. .+..... ..+.
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~ 211 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GAN---RILSRDEFAESRPLEKQL 211 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TCS---EEEEGGGSSCCCSSCCCC
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEecCCHHHHHhhcCCC
Confidence 455565532 4999986 478888999988888999999999888888653 432 2221 1211111 2357
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|+|+-. .+. ..++.+.+.|+++|+++..
T Consensus 212 ~d~v~d~-----~g~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 212 WAGAIDT-----VGD----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEEEEES-----SCH----HHHHHHHHTEEEEEEEEEC
T ss_pred ccEEEEC-----CCc----HHHHHHHHHHhcCCEEEEE
Confidence 8987753 332 3778888999999999873
No 355
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.98 E-value=0.02 Score=48.93 Aligned_cols=97 Identities=18% Similarity=0.220 Sum_probs=67.0
Q ss_pred HHHHcCCCCCCEEEEECCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--C----
Q 024096 26 LIEKARVSKGQEVLDIGCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--K---- 98 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~---- 98 (272)
.+....+.++++||-+|+| .|..+..+++..+++|++++.++...+.+++ .|.. .++ |..+.. .
T Consensus 156 ~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~--d~~~~~~~~~~~~ 226 (339)
T 1rjw_A 156 ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD---LVV--NPLKEDAAKFMKE 226 (339)
T ss_dssp HHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EEE--CTTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC---EEe--cCCCccHHHHHHH
Confidence 3445578899999999986 5777888887778899999999988887754 3431 222 332211 0
Q ss_pred -CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 99 -ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 -~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
...+|+|+..- +. ...++...+.|+++|++++.
T Consensus 227 ~~~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 227 KVGGVHAAVVTA-----VS---KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HHSSEEEEEESS-----CC---HHHHHHHHHHEEEEEEEEEC
T ss_pred HhCCCCEEEECC-----CC---HHHHHHHHHHhhcCCEEEEe
Confidence 04689888642 21 24667788899999998863
No 356
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.97 E-value=0.021 Score=49.03 Aligned_cols=97 Identities=22% Similarity=0.318 Sum_probs=66.3
Q ss_pred HHHHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC---CC---
Q 024096 26 LIEKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ---LP--- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~---~~--- 97 (272)
.+....+.++++||-+|+ |.|..+..+++..+++|++++.++...+.+++ .|.. .++ |..+ ..
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~ 231 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGE---VFI--DFTKEKDIVGAV 231 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCC---EEE--ETTTCSCHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCc---eEE--ecCccHhHHHHH
Confidence 445557889999999998 46777777777678899999998877766654 2421 222 3321 11
Q ss_pred ---CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 ---KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ---~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+.+|+|+..-. . ...++.+.+.|+++|++++.
T Consensus 232 ~~~~~~~~D~vi~~~g-----~---~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 232 LKATDGGAHGVINVSV-----S---EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHHHTSCEEEEEECSS-----C---HHHHHHHTTSEEEEEEEEEC
T ss_pred HHHhCCCCCEEEECCC-----c---HHHHHHHHHHHhcCCEEEEE
Confidence 0126899886532 1 35678888999999998863
No 357
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.96 E-value=0.049 Score=46.20 Aligned_cols=94 Identities=18% Similarity=0.197 Sum_probs=64.4
Q ss_pred HHcCCCCCCEEEEEC--CCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--------
Q 024096 28 EKARVSKGQEVLDIG--CGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------- 97 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG--~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------- 97 (272)
+...++++++||-.| +|.|..+..+++..+++|++++.+++..+.+++. |.. .++ |..+..
T Consensus 134 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----g~~---~~~--~~~~~~~~~~~~~~ 204 (327)
T 1qor_A 134 KTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GAW---QVI--NYREEDLVERLKEI 204 (327)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCccHHHHHHHH
Confidence 356788999999999 4567777777776788999999998887777652 321 222 222111
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+.+-. ...++.+.+.|+++|++++.
T Consensus 205 ~~~~~~D~vi~~~g---------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 205 TGGKKVRVVYDSVG---------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp TTTCCEEEEEECSC---------GGGHHHHHHTEEEEEEEEEC
T ss_pred hCCCCceEEEECCc---------hHHHHHHHHHhcCCCEEEEE
Confidence 1246999987533 13466778899999998863
No 358
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.95 E-value=0.061 Score=39.57 Aligned_cols=90 Identities=12% Similarity=0.075 Sum_probs=57.9
Q ss_pred CCEEEEECCCc-hHH-HHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEEE
Q 024096 35 GQEVLDIGCGW-GTL-AIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRIIS 107 (272)
Q Consensus 35 ~~~vLDiG~G~-G~~-~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~~ 107 (272)
..+|+=+|+|. |.. +..|.+ .+.+|+++|.+++.++.+++. .+.++.+|..+.. ....+|+|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~~--------g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRER--------GVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHHT--------TCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHc--------CCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 35899999974 332 233333 578999999999888776542 4678999986643 2357898887
Q ss_pred echhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 108 CGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.. ++......+-...+.+.|+.+++.
T Consensus 78 ~~-----~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 78 TI-----PNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp CC-----SCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EC-----CChHHHHHHHHHHHHHCCCCeEEE
Confidence 42 222222333345566678887665
No 359
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.94 E-value=0.048 Score=47.14 Aligned_cols=98 Identities=17% Similarity=0.258 Sum_probs=67.8
Q ss_pred HHHHcCCC-----CCCEEEEEC-CC-chHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc-----
Q 024096 26 LIEKARVS-----KGQEVLDIG-CG-WGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD----- 92 (272)
Q Consensus 26 l~~~l~~~-----~~~~vLDiG-~G-~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d----- 92 (272)
+.+...+. +|++||-+| +| .|..+..+++. .+++|++++.+++..+.+++ .|.. .++...
T Consensus 158 l~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~~~~~~ 230 (363)
T 4dvj_A 158 FFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVIDHSKPLAA 230 (363)
T ss_dssp HHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEECTTSCHHH
T ss_pred HHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCCHHH
Confidence 34556666 789999998 55 68888999987 68999999999988887765 3431 222211
Q ss_pred -cCCCCCCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 93 -YRQLPKANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 93 -~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+.+. ..+.+|+|+-. .+. ...++.+.+.|+++|++++.
T Consensus 231 ~v~~~-~~~g~Dvvid~-----~g~---~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 231 EVAAL-GLGAPAFVFST-----THT---DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHTT-CSCCEEEEEEC-----SCH---HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHh-cCCCceEEEEC-----CCc---hhhHHHHHHHhcCCCEEEEE
Confidence 0111 23579988863 321 35677888999999999874
No 360
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.90 E-value=0.024 Score=48.57 Aligned_cols=103 Identities=20% Similarity=0.213 Sum_probs=65.1
Q ss_pred HHHHHcCCCCCCEEEEECCCch-HHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-C---CC
Q 024096 25 VLIEKARVSKGQEVLDIGCGWG-TLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-L---PK 98 (272)
Q Consensus 25 ~l~~~l~~~~~~~vLDiG~G~G-~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~---~~ 98 (272)
..++....++|++||=+|+|.+ .++..+++. .+++|+++|.+++..+.+++. |...-+.....|..+ + ..
T Consensus 154 ~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~~~i~~~~~~~~~~v~~~t~ 229 (348)
T 4eez_A 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GADVTINSGDVNPVDEIKKITG 229 (348)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCSEEEEC-CCCHHHHHHHHTT
T ss_pred eeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCeEEEeCCCCCHHHHhhhhcC
Confidence 3456667889999999999864 455566655 688999999999877766643 432111111112111 1 12
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
...+|.++.... . ...+....+.|+++|++++.
T Consensus 230 g~g~d~~~~~~~----~----~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 230 GLGVQSAIVCAV----A----RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp SSCEEEEEECCS----C----HHHHHHHHHTEEEEEEEEEC
T ss_pred CCCceEEEEecc----C----cchhheeheeecCCceEEEE
Confidence 235666664321 1 45677788899999999874
No 361
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.89 E-value=0.042 Score=47.05 Aligned_cols=93 Identities=24% Similarity=0.334 Sum_probs=64.8
Q ss_pred HHHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------
Q 024096 27 IEKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------- 97 (272)
Q Consensus 27 ~~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------- 97 (272)
.+...+.+|++||-+|+ |.|..+..+++..+++|+++ .++...+.+++. |.. . +. +-.+..
T Consensus 143 ~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----Ga~---~-i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 143 VDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----GAT---P-ID-ASREPEDYAAEHT 212 (343)
T ss_dssp TTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----TSE---E-EE-TTSCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----CCC---E-ec-cCCCHHHHHHHHh
Confidence 36677889999999993 46788888888888999999 888877776553 432 1 22 212111
Q ss_pred CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 98 KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
....+|+|+-. .+. ..+....+.|+++|++++
T Consensus 213 ~~~g~D~vid~-----~g~----~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 213 AGQGFDLVYDT-----LGG----PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp TTSCEEEEEES-----SCT----HHHHHHHHHEEEEEEEEE
T ss_pred cCCCceEEEEC-----CCc----HHHHHHHHHHhcCCeEEE
Confidence 23479998864 321 356677788999999986
No 362
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.77 E-value=0.054 Score=46.31 Aligned_cols=91 Identities=22% Similarity=0.304 Sum_probs=64.3
Q ss_pred cCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---------C
Q 024096 30 ARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---------K 98 (272)
Q Consensus 30 l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---------~ 98 (272)
..+.++++||-.|+ |.|..+..+++..+++|++++.++...+.+++. |.. .++ |..+.. .
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----ga~---~~~--d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL----GAD---ETV--NYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCC---EEE--cCCcccHHHHHHHHhC
Confidence 46789999999998 578888888887788999999999888877642 421 222 322211 1
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
...+|+|+..-. . ..++.+.+.|+++|++++
T Consensus 233 ~~~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 233 GKGADKVVDHTG-A--------LYFEGVIKATANGGRIAI 263 (343)
T ss_dssp TTCEEEEEESSC-S--------SSHHHHHHHEEEEEEEEE
T ss_pred CCCceEEEECCC-H--------HHHHHHHHhhccCCEEEE
Confidence 247999987543 1 245667788999999886
No 363
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.77 E-value=0.059 Score=46.33 Aligned_cols=96 Identities=24% Similarity=0.229 Sum_probs=63.8
Q ss_pred HHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-------CC
Q 024096 28 EKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-------PK 98 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-------~~ 98 (272)
+..++.++++||-.|+ |.|..+..+++..+++|++++.+++..+.+++. |.. .++..+-.+. ..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GAA---AGFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCc---EEEecCChHHHHHHHHHhc
Confidence 4567889999999983 567777777777788999999999888777443 321 2222111111 01
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
...+|+|+.+-. .. .+....+.|+++|++++.
T Consensus 229 ~~~~d~vi~~~G-----~~----~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 229 GAGVNLILDCIG-----GS----YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TSCEEEEEESSC-----GG----GHHHHHHHEEEEEEEEEC
T ss_pred CCCceEEEECCC-----ch----HHHHHHHhccCCCEEEEE
Confidence 246999986532 11 355667889999999873
No 364
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.72 E-value=0.077 Score=45.10 Aligned_cols=94 Identities=17% Similarity=0.204 Sum_probs=65.0
Q ss_pred HHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--------
Q 024096 28 EKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------- 97 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------- 97 (272)
+...+.++.+||-.|+ |.|..+..+++..+++|++++.+++..+.+++. |.. .++ |..+..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~~---~~~--d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GCH---HTI--NYSTQDFAEVVREI 209 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCHHHHHHHHHH
Confidence 4567889999999994 678888887777788999999999877777542 321 222 222211
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+.+-.- ..++.+.+.|+++|+++..
T Consensus 210 ~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 210 TGGKGVDVVYDSIGK---------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HTTCCEEEEEECSCT---------TTHHHHHHTEEEEEEEEEC
T ss_pred hCCCCCeEEEECCcH---------HHHHHHHHhhccCCEEEEE
Confidence 12469999865321 3456777899999998863
No 365
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.63 E-value=0.092 Score=44.78 Aligned_cols=101 Identities=23% Similarity=0.269 Sum_probs=67.7
Q ss_pred HHHHHHcCCCCCCEEEEECCCc-hHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----
Q 024096 24 SVLIEKARVSKGQEVLDIGCGW-GTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---- 97 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---- 97 (272)
-.+.......++++||=.|+|. |.++..+++..++ .++++|.+++..+.+++. |. ..++..+-.+.+
T Consensus 150 ~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga---~~~i~~~~~~~~~~~~ 222 (346)
T 4a2c_A 150 LHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GA---MQTFNSSEMSAPQMQS 222 (346)
T ss_dssp HHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TC---SEEEETTTSCHHHHHH
T ss_pred HHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CC---eEEEeCCCCCHHHHHH
Confidence 4456777888999999999984 5566777777554 678999999888877654 43 233322211111
Q ss_pred ---CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 ---KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ---~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-. .+. ...++.+.+.|+++|++++.
T Consensus 223 ~~~~~~g~d~v~d~-----~G~---~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 223 VLRELRFNQLILET-----AGV---PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp HHGGGCSSEEEEEC-----SCS---HHHHHHHHHHCCTTCEEEEC
T ss_pred hhcccCCccccccc-----ccc---cchhhhhhheecCCeEEEEE
Confidence 23457877753 221 35677788899999999874
No 366
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.56 E-value=0.093 Score=44.36 Aligned_cols=96 Identities=24% Similarity=0.280 Sum_probs=64.1
Q ss_pred HHHHcCCCCCCEEEEEC-CC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-CC-CCCC
Q 024096 26 LIEKARVSKGQEVLDIG-CG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-LP-KANK 101 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG-~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~~-~~~~ 101 (272)
.++...+++|++||=+| +| .|..+..+++..+++|++++ ++...+.+++ .|.. .++..+-.+ .. ....
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~g 215 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE---QCINYHEEDFLLAISTP 215 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS---EEEETTTSCHHHHCCSC
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC---EEEeCCCcchhhhhccC
Confidence 34777889999999996 55 68888888888889999997 5544555544 3542 233222121 11 2257
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
+|+|+-. .+. ..+....+.|+++|+++.
T Consensus 216 ~D~v~d~-----~g~----~~~~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 216 VDAVIDL-----VGG----DVGIQSIDCLKETGCIVS 243 (321)
T ss_dssp EEEEEES-----SCH----HHHHHHGGGEEEEEEEEE
T ss_pred CCEEEEC-----CCc----HHHHHHHHhccCCCEEEE
Confidence 8988853 332 223778899999999986
No 367
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.52 E-value=0.022 Score=49.15 Aligned_cols=94 Identities=21% Similarity=0.267 Sum_probs=63.6
Q ss_pred HHcCCCCC------CEEEEECCC-chHHH-HHHH-HccCCE-EEEEcCCHH---HHHHHHHHHHHcCCCCCeEEEEcccC
Q 024096 28 EKARVSKG------QEVLDIGCG-WGTLA-IEIV-KQTGCK-YTGITLSEE---QLKYAEIKVREAGLQDHIRFYLCDYR 94 (272)
Q Consensus 28 ~~l~~~~~------~~vLDiG~G-~G~~~-~~l~-~~~~~~-v~gvd~s~~---~~~~a~~~~~~~g~~~~i~~~~~d~~ 94 (272)
+...+++| ++||-+|+| .|.++ ..++ +..+++ |++++.+++ ..+.+++ .|. ..+ |..
T Consensus 160 ~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa----~~v--~~~ 229 (357)
T 2b5w_A 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA----TYV--DSR 229 (357)
T ss_dssp HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC----EEE--ETT
T ss_pred HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC----ccc--CCC
Confidence 55566788 999999986 47777 8888 767776 999999887 6777654 242 222 322
Q ss_pred CCC--C----CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 95 QLP--K----ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 95 ~~~--~----~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+.. . .+.+|+|+-. .+. ...++.+.+.|+++|+++..
T Consensus 230 ~~~~~~i~~~~gg~Dvvid~-----~g~---~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 230 QTPVEDVPDVYEQMDFIYEA-----TGF---PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp TSCGGGHHHHSCCEEEEEEC-----SCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred ccCHHHHHHhCCCCCEEEEC-----CCC---hHHHHHHHHHHhcCCEEEEE
Confidence 211 0 1268988753 322 24577788899999999863
No 368
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.24 E-value=0.12 Score=44.35 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=66.9
Q ss_pred HHHHHHHcCCCCC--CEEEEECC--CchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC
Q 024096 23 VSVLIEKARVSKG--QEVLDIGC--GWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP 97 (272)
Q Consensus 23 ~~~l~~~l~~~~~--~~vLDiG~--G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~ 97 (272)
+..+.+...+.++ .+||-.|+ |.|..+..+++..|+ +|++++.+++..+.+++. .|.. .++ |..+..
T Consensus 147 ~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~ 218 (357)
T 2zb4_A 147 LIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD---AAI--NYKKDN 218 (357)
T ss_dssp HHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS---EEE--ETTTSC
T ss_pred HHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCchH
Confidence 3344467788899 99999997 466677777776788 999999998777666542 2321 222 322211
Q ss_pred --------CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 --------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 --------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+.+|+|+.+-. ...++.+.+.|+++|++++.
T Consensus 219 ~~~~~~~~~~~~~d~vi~~~G---------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 219 VAEQLRESCPAGVDVYFDNVG---------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHHHHHCTTCEEEEEESCC---------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCEEEECCC---------HHHHHHHHHHhccCcEEEEE
Confidence 1126898886432 14567788899999999863
No 369
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.20 E-value=0.12 Score=46.07 Aligned_cols=94 Identities=18% Similarity=0.243 Sum_probs=65.7
Q ss_pred cCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-----------
Q 024096 30 ARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL----------- 96 (272)
Q Consensus 30 l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~----------- 96 (272)
..+++|++||=+|+ |.|..+..+++..|+++++++.++...+.+++. |.. .++...-.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM----GAE---AIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCC---EEEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh----CCc---EEEecCcCcccccccccccch
Confidence 56789999999997 467888888888889999999999888887653 432 2222111111
Q ss_pred -------------CCCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 97 -------------PKANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 97 -------------~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.....+|+|+-. .+. ..+....+.|+++|++++.
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~-----~G~----~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEH-----PGR----ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEEC-----SCH----HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEc-----CCc----hhHHHHHHHhhCCcEEEEE
Confidence 022579988853 321 4567778899999999873
No 370
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.12 E-value=0.0032 Score=54.12 Aligned_cols=94 Identities=21% Similarity=0.202 Sum_probs=62.9
Q ss_pred HcCCCCCCEEEEECCC-chHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC------CCC
Q 024096 29 KARVSKGQEVLDIGCG-WGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------KAN 100 (272)
Q Consensus 29 ~l~~~~~~~vLDiG~G-~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------~~~ 100 (272)
..++ +|++||-+|+| .|..+..+++..++ +|++++.+++..+.+++. . + .++..+-.++. ...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l---a---~--~v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY---A---D--RLVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT---C---S--EEECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh---H---H--hccCcCccCHHHHHHHhcCC
Confidence 6677 99999999986 36777888877788 899999998877766542 1 1 12211111110 024
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.+|+|+-. .+. ...++...+.|+++|++++.
T Consensus 231 g~D~vid~-----~g~---~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 231 GVEVLLEF-----SGN---EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp CEEEEEEC-----SCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEC-----CCC---HHHHHHHHHHHhcCCEEEEE
Confidence 68999864 221 24567788899999998863
No 371
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.12 E-value=0.072 Score=45.42 Aligned_cols=72 Identities=8% Similarity=0.051 Sum_probs=55.0
Q ss_pred CCEEEEECCCchHHHHHHHHccC---CEE-EEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC----CCCccEEE
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQTG---CKY-TGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----ANKYDRII 106 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~~~---~~v-~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----~~~fD~V~ 106 (272)
..+++|+.||.|+++.-+.+. | ..+ .++|+++...+..+.+.. .. ++++|+.++.. ...+|+++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~-----~~--~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFK-----EE--VQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHC-----CC--CBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCC-----CC--cccCChhhcCHHHhccCCCCEEE
Confidence 469999999999999988886 4 356 799999998888877752 12 57789888862 23689999
Q ss_pred Eechhhcc
Q 024096 107 SCGMIEHV 114 (272)
Q Consensus 107 ~~~~~~~~ 114 (272)
.......+
T Consensus 82 ggpPCQ~f 89 (327)
T 3qv2_A 82 MSPPCQPY 89 (327)
T ss_dssp ECCCCTTC
T ss_pred ecCCccCc
Confidence 87664444
No 372
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=95.07 E-value=0.025 Score=48.09 Aligned_cols=96 Identities=18% Similarity=0.301 Sum_probs=62.6
Q ss_pred HHcCCCCCC-EEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc-cc-CC-CC--CC
Q 024096 28 EKARVSKGQ-EVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC-DY-RQ-LP--KA 99 (272)
Q Consensus 28 ~~l~~~~~~-~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~-d~-~~-~~--~~ 99 (272)
++..+.++. +||-+|+ |.|..+..+++..+++|++++.+++..+.+++ .|.. .++.. +. .+ .. ..
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~~ 214 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK---EVLAREDVMAERIRPLDK 214 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS---EEEECC---------CCS
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc---EEEecCCcHHHHHHHhcC
Confidence 445677875 8999997 57788888888778899999998877777654 3432 12211 11 01 11 22
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+|+|+-. .+. ..+....+.|+++|++++.
T Consensus 215 ~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 215 QRWAAAVDP-----VGG----RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CCEEEEEEC-----STT----TTHHHHHHTEEEEEEEEEC
T ss_pred CcccEEEEC-----CcH----HHHHHHHHhhccCCEEEEE
Confidence 468988754 221 2356677889999999863
No 373
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.98 E-value=0.014 Score=55.08 Aligned_cols=131 Identities=16% Similarity=0.178 Sum_probs=72.9
Q ss_pred cccCCCCCCHHHHHHHHHH--HHHHHcC--CCCCCEEEEECCCchHHHHHHHHc--------c-----CCEEEEEcC---
Q 024096 6 AIFKSEHEDLEVGQMRKVS--VLIEKAR--VSKGQEVLDIGCGWGTLAIEIVKQ--------T-----GCKYTGITL--- 65 (272)
Q Consensus 6 ~~~~~~~~~l~~aq~~~~~--~l~~~l~--~~~~~~vLDiG~G~G~~~~~l~~~--------~-----~~~v~gvd~--- 65 (272)
.||...+ .+.+++.-.+. .+-++.. ..+.-+|+|+|.|+|.....+.+. + ..+++.+|.
T Consensus 27 ~y~s~~~-~~~e~~~~f~~~~~l~~~~~~~~~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~ 105 (689)
T 3pvc_A 27 IYFSNED-GLEETHHVFLKGNGFPARFASHPQQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPL 105 (689)
T ss_dssp --CCSTT-SHHHHHHHTTTTTTTTHHHHHCCSSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred cccCCcC-HHHhhHhhccccCCHHHHHhhCCCCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCC
Confidence 3444443 57666553331 1111111 234569999999999977665442 1 157999999
Q ss_pred CHHHHHHHH-----------HHHHHc-----C-----CC---CCeEEEEcccCCCC--C----CCCccEEEEechhhccC
Q 024096 66 SEEQLKYAE-----------IKVREA-----G-----LQ---DHIRFYLCDYRQLP--K----ANKYDRIISCGMIEHVG 115 (272)
Q Consensus 66 s~~~~~~a~-----------~~~~~~-----g-----~~---~~i~~~~~d~~~~~--~----~~~fD~V~~~~~~~~~~ 115 (272)
+...+..+- +.+... | +. -.+++..+|+.+.- . ...+|.++...--....
T Consensus 106 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~n 185 (689)
T 3pvc_A 106 HVADLASAHARWPELASFAEQLRAQWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKN 185 (689)
T ss_dssp CHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--C
T ss_pred CHHHHHHHHHhCcchhHHHHHHHHhCcccCCCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCC
Confidence 444443321 112111 1 01 14567888875432 1 46899999865221110
Q ss_pred hh-hHHHHHHHHHhcCccCcEEE
Q 024096 116 HD-YMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 116 ~~-~~~~~l~~~~~~LkpgG~l~ 137 (272)
++ =...++..+.++++|||.+.
T Consensus 186 p~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 186 PDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp CTTCSHHHHHHHHHHEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEE
Confidence 00 01678999999999999876
No 374
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.97 E-value=0.12 Score=43.46 Aligned_cols=73 Identities=18% Similarity=0.247 Sum_probs=55.2
Q ss_pred CCCCEEEEECCCchHHHHHHHHccCCE---EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----CCCccE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQTGCK---YTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----ANKYDR 104 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~~~~~---v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----~~~fD~ 104 (272)
..+.+++|+-||.|+++.-+.+. |.+ +.++|+++..++..+.+. +...+..+|+.++.. ...+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~------~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH------QGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT------TTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC------CCCceeCCChHHccHHHhcccCCcCE
Confidence 45679999999999999988876 433 589999998877666553 234688999988861 146999
Q ss_pred EEEechhh
Q 024096 105 IISCGMIE 112 (272)
Q Consensus 105 V~~~~~~~ 112 (272)
++......
T Consensus 87 l~ggpPCQ 94 (295)
T 2qrv_A 87 VIGGSPCN 94 (295)
T ss_dssp EEECCCCG
T ss_pred EEecCCCc
Confidence 99876433
No 375
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=94.85 E-value=0.026 Score=48.04 Aligned_cols=96 Identities=20% Similarity=0.278 Sum_probs=64.1
Q ss_pred HHcCCCCCC-EEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc-cc--CCCC--CC
Q 024096 28 EKARVSKGQ-EVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC-DY--RQLP--KA 99 (272)
Q Consensus 28 ~~l~~~~~~-~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~-d~--~~~~--~~ 99 (272)
++..+.++. +||-.|+ |.|..+..+++..++++++++.+++..+.+++. |.. .++.. +. .... ..
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~~~ 215 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GAS---EVISREDVYDGTLKALSK 215 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCS---EEEEHHHHCSSCCCSSCC
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEEECCCchHHHHHHhhc
Confidence 445677875 8999997 477788888887788999999988777777643 432 22221 11 1111 23
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+|+|+-. .+. ..+....+.|+++|++++.
T Consensus 216 ~~~d~vid~-----~g~----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 216 QQWQGAVDP-----VGG----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCEEEEEES-----CCT----HHHHHHHTTEEEEEEEEEC
T ss_pred CCccEEEEC-----CcH----HHHHHHHHhhcCCCEEEEE
Confidence 468988754 332 2567788899999999863
No 376
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.79 E-value=0.22 Score=42.99 Aligned_cols=91 Identities=19% Similarity=0.234 Sum_probs=60.6
Q ss_pred CCCCEEEEECC-C-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC------CCCCccE
Q 024096 33 SKGQEVLDIGC-G-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------KANKYDR 104 (272)
Q Consensus 33 ~~~~~vLDiG~-G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------~~~~fD~ 104 (272)
.+|.+||=+|+ | .|..+..+++..|++|+++. ++...+.+++ .|.. .++...-.+.. ..+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGAE---EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCCc---EEEECCCchHHHHHHHHccCCccE
Confidence 78999999998 3 78899999988888999885 7776666654 3532 33322211111 1245999
Q ss_pred EEEechhhccChhhHHHHHHHHHhcC-ccCcEEEEE
Q 024096 105 IISCGMIEHVGHDYMEEFFGCCESLL-ATHGLLVLQ 139 (272)
Q Consensus 105 V~~~~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~ 139 (272)
|+-. .+. ...++.+.+.| +++|+++..
T Consensus 235 v~d~-----~g~---~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 235 ALDC-----ITN---VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEES-----SCS---HHHHHHHHHHSCTTCEEEEES
T ss_pred EEEC-----CCc---hHHHHHHHHHhhcCCCEEEEE
Confidence 8853 322 34566677778 699999863
No 377
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.73 E-value=0.1 Score=45.05 Aligned_cols=92 Identities=24% Similarity=0.278 Sum_probs=61.2
Q ss_pred HcCCC--C-------CCEEEEECCC-chHHHHHHHHccCCEEEEEcCCH---HHHHHHHHHHHHcCCCCCeEEEEcccCC
Q 024096 29 KARVS--K-------GQEVLDIGCG-WGTLAIEIVKQTGCKYTGITLSE---EQLKYAEIKVREAGLQDHIRFYLCDYRQ 95 (272)
Q Consensus 29 ~l~~~--~-------~~~vLDiG~G-~G~~~~~l~~~~~~~v~gvd~s~---~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 95 (272)
...++ + |++||-+|+| .|..+..+++..|++|++++.++ +..+.+++. |. ..+ | .+
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~----ga----~~v--~-~~ 234 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET----KT----NYY--N-SS 234 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH----TC----EEE--E-CT
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh----CC----cee--c-hH
Confidence 55677 7 9999999985 35566666766788999999987 666666543 32 222 2 22
Q ss_pred -CCC-----CCCccEEEEechhhccChhhHHHHH-HHHHhcCccCcEEEEE
Q 024096 96 -LPK-----ANKYDRIISCGMIEHVGHDYMEEFF-GCCESLLATHGLLVLQ 139 (272)
Q Consensus 96 -~~~-----~~~fD~V~~~~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~i~ 139 (272)
... ...+|+|+..-. . ...+ +.+.+.|+++|++++.
T Consensus 235 ~~~~~~~~~~~~~d~vid~~g-----~---~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 235 NGYDKLKDSVGKFDVIIDATG-----A---DVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp TCSHHHHHHHCCEEEEEECCC-----C---CTHHHHHHGGGEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCCEEEECCC-----C---hHHHHHHHHHHHhcCCEEEEE
Confidence 110 146899986432 1 1245 7788999999998863
No 378
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.71 E-value=0.054 Score=45.40 Aligned_cols=93 Identities=18% Similarity=0.146 Sum_probs=62.5
Q ss_pred HcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc-CCCC-CCCCccE
Q 024096 29 KARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY-RQLP-KANKYDR 104 (272)
Q Consensus 29 ~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~-~~~~-~~~~fD~ 104 (272)
.. +++|++||-+|+ |.|..+..+++..+++|++++.+++..+.+++ .|.. .++..+- .+.. .-..+|+
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~d~ 192 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAWGGLDL 192 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHTTSEEE
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHhcCceE
Confidence 44 789999999997 46778888887778899999998887777654 3431 2222111 1111 1156899
Q ss_pred EEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 105 IISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 105 V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
|+. -.- ..++...+.|+++|+++..
T Consensus 193 vid-~g~---------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 193 VLE-VRG---------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEE-CSC---------TTHHHHHTTEEEEEEEEEC
T ss_pred EEE-CCH---------HHHHHHHHhhccCCEEEEE
Confidence 886 321 2456678899999998863
No 379
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.69 E-value=0.12 Score=45.66 Aligned_cols=92 Identities=13% Similarity=0.183 Sum_probs=62.4
Q ss_pred CCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEEEe
Q 024096 35 GQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRIISC 108 (272)
Q Consensus 35 ~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~~~ 108 (272)
..+|+=+|+|. |..........+..|+++|.++..++.++.. .+.++.+|..+.. .....|+|++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--------g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--------GMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--------TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--------CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 45799999874 3222222222578999999999998877642 4678999988754 34678998874
Q ss_pred chhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 109 GMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 109 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+++......+....+.+.|...+++.
T Consensus 76 -----~~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 76 -----IDDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp -----CSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred -----CCChHHHHHHHHHHHHhCCCCeEEEE
Confidence 33333455566667777888887763
No 380
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.68 E-value=0.21 Score=38.30 Aligned_cols=91 Identities=16% Similarity=0.069 Sum_probs=54.0
Q ss_pred CCEEEEECCCc-hHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----C--CCCccEEE
Q 024096 35 GQEVLDIGCGW-GTLAIEIVKQT-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----K--ANKYDRII 106 (272)
Q Consensus 35 ~~~vLDiG~G~-G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----~--~~~fD~V~ 106 (272)
+.+|+=+|+|. |.......... +.+|+++|.+++..+.+++ . .+.++.+|..+.. . ...+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 56899999874 33222222235 7899999999987766543 2 3456777765422 1 35689988
Q ss_pred EechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
..- ++......+-...+.+.|++.++.
T Consensus 111 ~~~-----~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 111 LAM-----PHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp ECC-----SSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred EeC-----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 742 212222233334555677777765
No 381
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.63 E-value=0.15 Score=47.89 Aligned_cols=130 Identities=15% Similarity=0.165 Sum_probs=74.4
Q ss_pred ccCCCCCCHHHHHHHHHH--HHHHHcC--CCCCCEEEEECCCchHHHHHHHHc-----------c--CCEEEEEcC---C
Q 024096 7 IFKSEHEDLEVGQMRKVS--VLIEKAR--VSKGQEVLDIGCGWGTLAIEIVKQ-----------T--GCKYTGITL---S 66 (272)
Q Consensus 7 ~~~~~~~~l~~aq~~~~~--~l~~~l~--~~~~~~vLDiG~G~G~~~~~l~~~-----------~--~~~v~gvd~---s 66 (272)
||+..+ .+.+++.-.+. .+-++.. ..+.-+|||+|-|+|.+.....+. . ..+++++|. +
T Consensus 36 y~s~~~-~~~e~~~vf~~~~~l~~~~~~~~~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~ 114 (676)
T 3ps9_A 36 YFSNDN-GLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLT 114 (676)
T ss_dssp SSCTTT-HHHHHHHHTTGGGTHHHHGGGCSSSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCC
T ss_pred ccCCcC-HHHhhHhhhhccCChhHHHHhCCCCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCC
Confidence 444333 56666554442 2333332 234469999999999876655432 1 146899999 6
Q ss_pred HHHHHHHHH-----------HHHHcCC--C-----------CCeEEEEcccCCCC------CCCCccEEEEechhhccCh
Q 024096 67 EEQLKYAEI-----------KVREAGL--Q-----------DHIRFYLCDYRQLP------KANKYDRIISCGMIEHVGH 116 (272)
Q Consensus 67 ~~~~~~a~~-----------~~~~~g~--~-----------~~i~~~~~d~~~~~------~~~~fD~V~~~~~~~~~~~ 116 (272)
++.+..+-. ....... + -.++...+|+.+.- ....||+|+...--....+
T Consensus 115 ~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np 194 (676)
T 3ps9_A 115 RADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNP 194 (676)
T ss_dssp HHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCG
T ss_pred HHHHHHHHHhChhhHHHHHHHHHhCcccCCCceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCCh
Confidence 666653322 2221110 0 12456667765422 1367999998652221111
Q ss_pred hh-HHHHHHHHHhcCccCcEEE
Q 024096 117 DY-MEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 117 ~~-~~~~l~~~~~~LkpgG~l~ 137 (272)
+- -..+++.+.++++|||.+.
T Consensus 195 ~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 195 DMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp GGSCHHHHHHHHHHEEEEEEEE
T ss_pred hhhhHHHHHHHHHHhCCCCEEE
Confidence 10 1678999999999999876
No 382
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.59 E-value=1.8 Score=40.63 Aligned_cols=158 Identities=10% Similarity=0.168 Sum_probs=97.1
Q ss_pred CCCEEEEECCCchHHHHHHHHc-c--------CCEEEEEcCCHHHHHHHHHHHHHcC--------------C--------
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ-T--------GCKYTGITLSEEQLKYAEIKVREAG--------------L-------- 82 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~-~--------~~~v~gvd~s~~~~~~a~~~~~~~g--------------~-------- 82 (272)
+...|+-+|||.=.....|... + +.+++=+|. |+.++.=++.+...+ .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 4578999999988888887654 2 445666664 666666555554221 0
Q ss_pred -CCCeEEEEcccCCCC------------CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCccc
Q 024096 83 -QDHIRFYLCDYRQLP------------KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQCYD 149 (272)
Q Consensus 83 -~~~i~~~~~d~~~~~------------~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 149 (272)
.++.+.+.+|+.+.. ..+.--++++..++.+++.+....+++.+.+. +++.+++-+...+.....
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d 263 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFE 263 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTS
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCC
Confidence 037889999998742 11334578888999999999999999999864 677777656554432111
Q ss_pred cccC-cchhhhhcccC---CCCCCCHHHHHHHhhcCCCcEEEEEEecCcc
Q 024096 150 EYRL-SPGFIKEYIFP---GGCLPSLGRVTSAMTSSSGLCVEHLENIGIH 195 (272)
Q Consensus 150 ~~~~-~~~~~~~~~~p---~~~~~~~~~~~~~l~~~~Gf~v~~~~~~~~~ 195 (272)
.+.. ....+...-.| -..+++.++..+.+. ++||..+...++..-
T Consensus 264 ~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~-~~Gw~~v~~~~~~~~ 312 (695)
T 2zwa_A 264 PFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFN-KLGFAYVNVGDMFQL 312 (695)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHH-HTTCCEEEEEEHHHH
T ss_pred hHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHH-HCCCCCcceeeHHHH
Confidence 1110 01111111011 123467777776655 599987777766543
No 383
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.56 E-value=0.19 Score=42.59 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=53.1
Q ss_pred CEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccEEEEechhh
Q 024096 36 QEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDRIISCGMIE 112 (272)
Q Consensus 36 ~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~V~~~~~~~ 112 (272)
++|||+-||.|+++.-+.+. |. .+.++|+++..++.-+.+. .-.++.+|+.++. .-...|+++......
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~-------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNH-------SAKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHC-------CSEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHC-------CCCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 47999999999999888776 54 4669999998777766652 2367889999887 235789998876444
Q ss_pred c
Q 024096 113 H 113 (272)
Q Consensus 113 ~ 113 (272)
.
T Consensus 73 ~ 73 (331)
T 3ubt_Y 73 S 73 (331)
T ss_dssp G
T ss_pred C
Confidence 3
No 384
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.49 E-value=0.054 Score=46.63 Aligned_cols=100 Identities=22% Similarity=0.265 Sum_probs=63.6
Q ss_pred HHHHcCCC-CCCEEEEECCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc-ccCCCC-CCCC
Q 024096 26 LIEKARVS-KGQEVLDIGCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC-DYRQLP-KANK 101 (272)
Q Consensus 26 l~~~l~~~-~~~~vLDiG~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~-~~~~ 101 (272)
.+....+. +|++||-+|+| .|..+..+++..+++|++++.+++..+.+++ ..|.. .++.. +...+. ..+.
T Consensus 171 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~---~vi~~~~~~~~~~~~~g 244 (357)
T 2cf5_A 171 PLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGAD---DYVIGSDQAKMSELADS 244 (357)
T ss_dssp HHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCS---CEEETTCHHHHHHSTTT
T ss_pred HHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCc---eeeccccHHHHHHhcCC
Confidence 34556777 99999999987 4667777887778899999998876666552 23432 12211 111111 1246
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|+|+-.-.-. ..++...+.|+++|+++..
T Consensus 245 ~D~vid~~g~~--------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 245 LDYVIDTVPVH--------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEEEECCCSC--------CCSHHHHTTEEEEEEEEEC
T ss_pred CCEEEECCCCh--------HHHHHHHHHhccCCEEEEe
Confidence 89988643211 2344566789999999863
No 385
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=94.43 E-value=0.25 Score=43.60 Aligned_cols=45 Identities=22% Similarity=0.280 Sum_probs=36.4
Q ss_pred CCEEEEECCCchHHHHHHHHc---c---CCEEEEEcCCHHHHHHHHHHHHH
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ---T---GCKYTGITLSEEQLKYAEIKVRE 79 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~---~---~~~v~gvd~s~~~~~~a~~~~~~ 79 (272)
..+|+|+|.|+|.++..+.+. . ..+++.||+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 469999999999988877653 1 24899999999988887777764
No 386
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.26 E-value=0.071 Score=45.58 Aligned_cols=70 Identities=13% Similarity=0.151 Sum_probs=53.2
Q ss_pred CEEEEECCCchHHHHHHHHccC---CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----CCCCccEEEEe
Q 024096 36 QEVLDIGCGWGTLAIEIVKQTG---CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----KANKYDRIISC 108 (272)
Q Consensus 36 ~~vLDiG~G~G~~~~~l~~~~~---~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----~~~~fD~V~~~ 108 (272)
.+++|+-||.|+++.-+.+. | ..+.++|+++...+..+.|.. ...+..+|+.++. +...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEec
Confidence 48999999999999988876 4 357899999988877776642 3457788998876 12368999977
Q ss_pred chhh
Q 024096 109 GMIE 112 (272)
Q Consensus 109 ~~~~ 112 (272)
....
T Consensus 77 pPCQ 80 (333)
T 4h0n_A 77 PPCQ 80 (333)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 6443
No 387
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.25 E-value=0.25 Score=42.73 Aligned_cols=92 Identities=20% Similarity=0.216 Sum_probs=59.3
Q ss_pred CCCCCEEEEEC-CC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----CCCCccEE
Q 024096 32 VSKGQEVLDIG-CG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----KANKYDRI 105 (272)
Q Consensus 32 ~~~~~~vLDiG-~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----~~~~fD~V 105 (272)
+.+|++||-.| +| .|..+..+++..+++|++++ ++...+.++ ..|.. .++..+-.+.. ....+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~----~lGa~---~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR----KLGAD---DVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH----HTTCS---EEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH----HcCCC---EEEECCchHHHHHHhhcCCCCEE
Confidence 78899999999 34 67788888887788999998 665555553 33432 22222111111 22469998
Q ss_pred EEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 106 ISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
+-.- +.. ...+....+.|+++|+++.
T Consensus 253 id~~-----g~~--~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 253 LDNV-----GGS--TETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp EESS-----CTT--HHHHGGGGBCSSSCCEEEE
T ss_pred EECC-----CCh--hhhhHHHHHhhcCCcEEEE
Confidence 8642 211 1345667789999999986
No 388
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.24 E-value=0.049 Score=48.45 Aligned_cols=97 Identities=22% Similarity=0.224 Sum_probs=64.3
Q ss_pred cCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC------------
Q 024096 30 ARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ------------ 95 (272)
Q Consensus 30 l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~------------ 95 (272)
..+.+|++||-.|+ |.|..+..+++..++++++++.+++..+.+++ .|...-+.....|+.+
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchh
Confidence 57889999999996 46778888888788999999999988877754 3432111111111100
Q ss_pred -------CC--CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 96 -------LP--KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 96 -------~~--~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+. ....+|+|+-. .+. ..++...+.|+++|++++.
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~-----~G~----~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEH-----TGR----VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEEC-----SCH----HHHHHHHHHSCTTCEEEES
T ss_pred hhHHHHHHHHHhCCCceEEEEC-----CCc----hHHHHHHHHHhcCCEEEEE
Confidence 00 12468999864 321 3466777889999999873
No 389
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.22 E-value=0.34 Score=35.26 Aligned_cols=89 Identities=16% Similarity=0.140 Sum_probs=54.4
Q ss_pred CCEEEEECCCc-hH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEEE
Q 024096 35 GQEVLDIGCGW-GT-LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRIIS 107 (272)
Q Consensus 35 ~~~vLDiG~G~-G~-~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~~ 107 (272)
..+|+=+|+|. |. ++..|.+ .+.+|+++|.+++.++.+++. .+.++.+|..+.. ....+|.|+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~-~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA-AGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 45799999974 22 2233333 478999999999877666542 4678889987643 2357898887
Q ss_pred echhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 108 CGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
... +......+....+.+. ..+++.
T Consensus 77 ~~~-----~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 77 TGS-----DDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CCS-----CHHHHHHHHHHHHHHC-CCCEEE
T ss_pred ecC-----CHHHHHHHHHHHHHhC-CceEEE
Confidence 532 2222333444444445 555554
No 390
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.19 E-value=0.45 Score=41.26 Aligned_cols=98 Identities=10% Similarity=0.100 Sum_probs=68.3
Q ss_pred CCCEEEEECCCchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-CeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQD-HIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~-~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
.+.+||.++.+.|.++..++.. + ++.+.=|-......+.|+..++++. ++++... ... ....+|+|+.... .
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-~--~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~~~~~~~v~~~lp-k 110 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-K--PYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD--YPQQPGVVLIKVP-K 110 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-C--CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC--CCSSCSEEEEECC-S
T ss_pred CCCCEEEECCCCCHHHHhhccC-C--ceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc--cccCCCEEEEEcC-C
Confidence 5568999999999999888754 3 3444336666667788888888854 3565433 222 2368999987533 2
Q ss_pred ccChhhHHHHHHHHHhcCccCcEEEEEe
Q 024096 113 HVGHDYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+. ......+..+...|+||+.+++..
T Consensus 111 ~~--~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 111 TL--ALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CH--HHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CH--HHHHHHHHHHHhhCCCCCEEEEEe
Confidence 22 455678889999999999988644
No 391
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.17 E-value=0.025 Score=47.49 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=40.9
Q ss_pred CCeEEEEcccCCC-C--CCCCccEEEEechhhccCh------------------hhHHHHHHHHHhcCccCcEEEEE
Q 024096 84 DHIRFYLCDYRQL-P--KANKYDRIISCGMIEHVGH------------------DYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 84 ~~i~~~~~d~~~~-~--~~~~fD~V~~~~~~~~~~~------------------~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
.++.++++|..+. . ++++||+|+++.......+ ..+..+++++.++|||||.+++.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3678999998773 3 4679999999987642210 11345788999999999999885
No 392
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.13 E-value=0.12 Score=44.64 Aligned_cols=100 Identities=25% Similarity=0.272 Sum_probs=62.7
Q ss_pred HHHHcCCC-CCCEEEEECCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcc-cCCCC-CCCC
Q 024096 26 LIEKARVS-KGQEVLDIGCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCD-YRQLP-KANK 101 (272)
Q Consensus 26 l~~~l~~~-~~~~vLDiG~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d-~~~~~-~~~~ 101 (272)
.+....+. +|++||-+|+| .|..+..+++..+++|++++.++...+.+++ ..|.. .++..+ ...+. ..+.
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~~~~ 251 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAAAGT 251 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHTTTC
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHhhCC
Confidence 34556777 89999999987 3667777777778899999998877666542 22421 222111 10111 1246
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|+|+..-... ..++...+.|+++|+++..
T Consensus 252 ~D~vid~~g~~--------~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 252 LDGIIDTVSAV--------HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEEEECCSSC--------CCSHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCcH--------HHHHHHHHHHhcCCEEEEE
Confidence 99998653221 1234456778999998863
No 393
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.93 E-value=0.14 Score=38.41 Aligned_cols=112 Identities=16% Similarity=0.095 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCCchHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC
Q 024096 17 VGQMRKVSVLIEKARVSKGQEVLDIGCGWGTLAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ 95 (272)
Q Consensus 17 ~aq~~~~~~l~~~l~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 95 (272)
.+|+.-+++++++....+| -|||+|-|+|..=.+|.+. ++.+|+.+|-.-.. .- . -.|+.-.++.+|+.+
T Consensus 24 taQR~~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~------hp-~-~~P~~e~~ilGdi~~ 94 (174)
T 3iht_A 24 VSQRACLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS------HP-D-STPPEAQLILGDIRE 94 (174)
T ss_dssp HHHHHHHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC------CG-G-GCCCGGGEEESCHHH
T ss_pred HHHHHHHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc------CC-C-CCCchHheecccHHH
Confidence 5788888999999886666 6999999999999999998 88999999952100 00 0 012233556666554
Q ss_pred CC-C-----CCCccEEEEechhhccChhh---HHHHHHHHHhcCccCcEEEE
Q 024096 96 LP-K-----ANKYDRIISCGMIEHVGHDY---MEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 96 ~~-~-----~~~fD~V~~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~i 138 (272)
.- . ..+.-++......++- +++ ...+-.-+..+|.|||.++-
T Consensus 95 tL~~~~~r~g~~a~LaHaD~G~g~~-~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 95 TLPATLERFGATASLVHADLGGHNR-EKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHHHHHHCSCEEEEEECCCCSCH-HHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHhcCCceEEEEeecCCCCc-chhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 32 1 2233333333222221 111 12233446789999998874
No 394
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=93.72 E-value=0.21 Score=42.89 Aligned_cols=95 Identities=17% Similarity=0.229 Sum_probs=57.3
Q ss_pred HHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEE-cCCHH---HHHHHHHHHHHcCCCCCeEEEEc------ccCC
Q 024096 28 EKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGI-TLSEE---QLKYAEIKVREAGLQDHIRFYLC------DYRQ 95 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gv-d~s~~---~~~~a~~~~~~~g~~~~i~~~~~------d~~~ 95 (272)
+...+.+|++||-+|+ |.|..+..+++..|++++++ +.++. ..+.+ +..|.. .++.. ++.+
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~----~~lGa~---~vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRL----KSLGAE---HVITEEELRRPEMKN 233 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHH----HHTTCS---EEEEHHHHHSGGGGG
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHH----HhcCCc---EEEecCcchHHHHHH
Confidence 3457889999999996 47888889998778876655 44332 23333 334532 22221 1222
Q ss_pred CCCC-CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 96 LPKA-NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 96 ~~~~-~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.... ..+|+|+-. .+.. .. ....+.|+++|++++
T Consensus 234 ~~~~~~~~Dvvid~-----~g~~---~~-~~~~~~l~~~G~iv~ 268 (357)
T 1zsy_A 234 FFKDMPQPRLALNC-----VGGK---SS-TELLRQLARGGTMVT 268 (357)
T ss_dssp TTSSSCCCSEEEES-----SCHH---HH-HHHHTTSCTTCEEEE
T ss_pred HHhCCCCceEEEEC-----CCcH---HH-HHHHHhhCCCCEEEE
Confidence 2111 248998753 3322 22 356789999999986
No 395
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.17 E-value=1.6 Score=31.09 Aligned_cols=90 Identities=13% Similarity=0.089 Sum_probs=52.4
Q ss_pred CCEEEEECCCchH--HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEEE
Q 024096 35 GQEVLDIGCGWGT--LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRIIS 107 (272)
Q Consensus 35 ~~~vLDiG~G~G~--~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~~ 107 (272)
+++|+=+|+|.=+ ++..|.+ .+.+|+++|.++...+..++. . .+.++.+|..+.. ....+|+|+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-KGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 4689999886422 2223333 478999999998766554432 1 3466777765432 1357899988
Q ss_pred echhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 108 CGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.-. .......+..+.+.+.++ .+++
T Consensus 76 ~~~-----~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 76 VTG-----KEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CCS-----CHHHHHHHHHHHHHTTCC-CEEE
T ss_pred eeC-----CchHHHHHHHHHHHcCCC-EEEE
Confidence 632 222234455555567775 5544
No 396
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.96 E-value=1.1 Score=35.21 Aligned_cols=88 Identities=16% Similarity=0.006 Sum_probs=57.3
Q ss_pred EEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEEEe
Q 024096 37 EVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRIISC 108 (272)
Q Consensus 37 ~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~~~ 108 (272)
+|+=+|+ |..+..+++. .+.+|+.+|.+++.++...+. ..+.++.+|..+.. .-..+|+|++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 5777776 4455544443 478999999999877664432 14678999987643 23678999875
Q ss_pred chhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 109 GMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 109 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.+++.....+....+.+.|...++.
T Consensus 73 -----~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 73 -----TPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp -----CSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred -----cCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 2333334556666666667766664
No 397
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.93 E-value=1.4 Score=35.85 Aligned_cols=92 Identities=11% Similarity=0.095 Sum_probs=58.4
Q ss_pred CEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 36 QEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 36 ~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
++||=.|+ |.++..+++. .+.+|++++-++........ .+++++.+|+.++. ...+|+|+......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~-~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS-LDGVTHLLISTAPD 74 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC-CTTCCEEEECCCCB
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc-cCCCCEEEECCCcc
Confidence 68999995 7777776654 47899999988755433321 36899999998876 56789998876544
Q ss_pred ccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 113 HVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.........+++.+.+.-..-.++++
T Consensus 75 ~~~~~~~~~l~~a~~~~~~~~~~~v~ 100 (286)
T 3ius_A 75 SGGDPVLAALGDQIAARAAQFRWVGY 100 (286)
T ss_dssp TTBCHHHHHHHHHHHHTGGGCSEEEE
T ss_pred ccccHHHHHHHHHHHhhcCCceEEEE
Confidence 33222223444444432122245554
No 398
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.59 E-value=1.1 Score=33.10 Aligned_cols=92 Identities=20% Similarity=0.200 Sum_probs=57.6
Q ss_pred CCEEEEECCCchHHHHHHHHc---cCCEEEEEcCC-HHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEE
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLS-EEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRI 105 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s-~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V 105 (272)
..+|+=+|+| ..+..+++. .+.+|+.+|.+ ++..+...... +..+.++.+|..+.. .-+..|+|
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 4578888875 444444433 47899999997 45444433321 135789999986643 24678998
Q ss_pred EEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 106 ISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
++.. ++......+....+.+.|..+++.
T Consensus 76 i~~~-----~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 76 LALS-----DNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp EECS-----SCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred EEec-----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 8753 223345556666666777777765
No 399
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.58 E-value=2.1 Score=34.91 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=67.7
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCC------------HHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLS------------EEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s------------~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~ 98 (272)
.+.+||=.|++.|. ++..|+++ |++|+.+|.+ ....+.+...+...+ .++.++.+|+.+...
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE-GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 46789988887653 44455554 8999999987 666666665555544 478999999877540
Q ss_pred -----------CCCccEEEEechhhc----cChhhHHH-----------HHHHHHhcCccCcEEEEE
Q 024096 99 -----------ANKYDRIISCGMIEH----VGHDYMEE-----------FFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 -----------~~~fD~V~~~~~~~~----~~~~~~~~-----------~l~~~~~~LkpgG~l~i~ 139 (272)
-++.|+++.+..+.. .+.+++.. +.+.+...|+.+|.++..
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 137899998765432 22233322 445566777788887764
No 400
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.46 E-value=0.25 Score=36.79 Aligned_cols=94 Identities=15% Similarity=0.177 Sum_probs=53.2
Q ss_pred CCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---C--CCCccEEE
Q 024096 33 SKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---K--ANKYDRII 106 (272)
Q Consensus 33 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~--~~~fD~V~ 106 (272)
.++.+|+=+|+|. |......+...+.+|+++|.++...+.++. . ....++.+|..+.. . ...+|+|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 4678999999874 332222222357899999998865443321 1 13456667754422 1 24689988
Q ss_pred EechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
..-. .......+..+.+.+.+...++.
T Consensus 90 ~~~~-----~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 90 AFTN-----DDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp ECSS-----CHHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEeC-----CcHHHHHHHHHHHHHCCCCeEEE
Confidence 7532 22233444445555555555554
No 401
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.36 E-value=0.2 Score=42.75 Aligned_cols=97 Identities=12% Similarity=0.160 Sum_probs=60.1
Q ss_pred HHHHcCCCCC-CEEEEE-CCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----
Q 024096 26 LIEKARVSKG-QEVLDI-GCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----- 97 (272)
Q Consensus 26 l~~~l~~~~~-~~vLDi-G~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----- 97 (272)
+++... .++ .+||=. |+| .|..+..+++..|++|++++.+++..+.+++. |.. .++..+-.+..
T Consensus 156 ~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~ 227 (349)
T 3pi7_A 156 MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI----GAA---HVLNEKAPDFEATLRE 227 (349)
T ss_dssp HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH----TCS---EEEETTSTTHHHHHHH
T ss_pred HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEECCcHHHHHHHHH
Confidence 444444 455 566654 443 56777777877788999999999888877653 421 23322211111
Q ss_pred --CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 --KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
....+|+|+-. .+. ..+..+.+.|+++|++++.
T Consensus 228 ~~~~~g~D~vid~-----~g~----~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 228 VMKAEQPRIFLDA-----VTG----PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HHHHHCCCEEEES-----SCH----HHHHHHHHHSCTTCEEEEC
T ss_pred HhcCCCCcEEEEC-----CCC----hhHHHHHhhhcCCCEEEEE
Confidence 11369999864 222 2236677889999999873
No 402
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.13 E-value=2.7 Score=34.72 Aligned_cols=104 Identities=17% Similarity=0.124 Sum_probs=67.3
Q ss_pred CCCCEEEEECCCc----hH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----------
Q 024096 33 SKGQEVLDIGCGW----GT-LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---------- 97 (272)
Q Consensus 33 ~~~~~vLDiG~G~----G~-~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---------- 97 (272)
-.++++|=.|++. |. ++..+++. |++|+.++.++...+.+.+.....+ ++.++.+|+.+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHH
Confidence 4577999999663 32 45556664 8899999998766666555555443 6889999987754
Q ss_pred -CCCCccEEEEechhhc----------cChhhHH-----------HHHHHHHhcCccCcEEEEEe
Q 024096 98 -KANKYDRIISCGMIEH----------VGHDYME-----------EFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~----------~~~~~~~-----------~~l~~~~~~LkpgG~l~i~~ 140 (272)
.-++.|+++.+..+.. .+.+++. .+.+.+...|+.+|+++...
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 1147899998765432 2222222 24455566777788887643
No 403
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.97 E-value=0.48 Score=42.66 Aligned_cols=88 Identities=16% Similarity=0.173 Sum_probs=55.5
Q ss_pred CCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEech
Q 024096 32 VSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGM 110 (272)
Q Consensus 32 ~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~ 110 (272)
..+|++|+=+|+|. |......++..|.+|+++|.++...+.+++ .|. .+ .++.+. -...|+|+..-.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e~--l~~aDvVi~atg 338 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM----EGF----DV--VTVEEA--IGDADIVVTATG 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTC----EE--CCHHHH--GGGCSEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC----EE--ecHHHH--HhCCCEEEECCC
Confidence 56889999999973 444444444478899999999987666543 232 22 232222 146799988643
Q ss_pred hhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 111 IEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
-.++ +-.+..+.||+||+++.
T Consensus 339 t~~~-------i~~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 339 NKDI-------IMLEHIKAMKDHAILGN 359 (494)
T ss_dssp SSCS-------BCHHHHHHSCTTCEEEE
T ss_pred CHHH-------HHHHHHHhcCCCcEEEE
Confidence 2232 11245566899999875
No 404
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.88 E-value=2 Score=34.72 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=67.9
Q ss_pred CCCEEEEECCC----chH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC----------
Q 024096 34 KGQEVLDIGCG----WGT-LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK---------- 98 (272)
Q Consensus 34 ~~~~vLDiG~G----~G~-~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~---------- 98 (272)
.+.++|=.|++ .|. ++..|+++ |++|+.++.++...+.+.+.....+- .++.++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHH
Confidence 46789999865 332 45556664 88999998887665666555554432 268999999987640
Q ss_pred -CCCccEEEEechhhc----------cChhhHH-----------HHHHHHHhcCccCcEEEEEe
Q 024096 99 -ANKYDRIISCGMIEH----------VGHDYME-----------EFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 99 -~~~fD~V~~~~~~~~----------~~~~~~~-----------~~l~~~~~~LkpgG~l~i~~ 140 (272)
-+..|.++.+..+.. .+.++.. .+.+.+...++++|+++...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 137898888754432 2222222 24556677788888887643
No 405
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.34 E-value=0.14 Score=43.55 Aligned_cols=57 Identities=16% Similarity=0.267 Sum_probs=42.3
Q ss_pred CCeEEEEcccCC-CC--CCCCccEEEEechhhccCh------------hhHHHHHHHHHhcCccCcEEEEEe
Q 024096 84 DHIRFYLCDYRQ-LP--KANKYDRIISCGMIEHVGH------------DYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 84 ~~i~~~~~d~~~-~~--~~~~fD~V~~~~~~~~~~~------------~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
+...++++|..+ +. ++++||+|++......... ......++++.++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 367889999765 33 5678999999876543210 235678899999999999999853
No 406
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.28 E-value=0.22 Score=42.73 Aligned_cols=97 Identities=18% Similarity=0.245 Sum_probs=57.9
Q ss_pred cCCCCC-CEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc---CCCC------
Q 024096 30 ARVSKG-QEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDY---RQLP------ 97 (272)
Q Consensus 30 l~~~~~-~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~---~~~~------ 97 (272)
..+++| ++||-.|+ |.|..+..+++..+++++++..+++..+..++.++..|.. .++..+- .++.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~ 238 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEW 238 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHH
Confidence 468899 99999986 4777888888877889888865443311111222333532 2222110 1111
Q ss_pred ---CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 98 ---KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 98 ---~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
....+|+|+-. .+.. ... ...+.|+++|+++.
T Consensus 239 t~~~~~g~Dvvid~-----~G~~---~~~-~~~~~l~~~G~~v~ 273 (364)
T 1gu7_A 239 IKQSGGEAKLALNC-----VGGK---SST-GIARKLNNNGLMLT 273 (364)
T ss_dssp HHHHTCCEEEEEES-----SCHH---HHH-HHHHTSCTTCEEEE
T ss_pred hhccCCCceEEEEC-----CCch---hHH-HHHHHhccCCEEEE
Confidence 12468998853 3322 223 56789999999986
No 407
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=90.92 E-value=0.48 Score=40.44 Aligned_cols=95 Identities=21% Similarity=0.265 Sum_probs=57.7
Q ss_pred HHHHcCCCCCCEEEEECC--CchHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----
Q 024096 26 LIEKARVSKGQEVLDIGC--GWGTLAIEIVKQT-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----- 97 (272)
Q Consensus 26 l~~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----- 97 (272)
+.+...+++|++||=.|+ +.|..+..+++.. +.+|++++ ++...+.++ .|.. .++. +-.+..
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~---~~~~-~~~~~~~~~~~ 203 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVT---HLFD-RNADYVQEVKR 203 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSS---EEEE-TTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCc---EEEc-CCccHHHHHHH
Confidence 345567889999999998 3677888888774 57899988 554444433 2331 2332 111111
Q ss_pred -CCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+.+|+|+-. .+.+ .+..+.+.|+++|++++.
T Consensus 204 ~~~~g~Dvv~d~-----~g~~----~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 204 ISAEGVDIVLDC-----LCGD----NTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp HCTTCEEEEEEE-----CC-----------CTTEEEEEEEEEE
T ss_pred hcCCCceEEEEC-----CCch----hHHHHHHHhhcCCEEEEE
Confidence 23579999864 2221 236678999999999874
No 408
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.90 E-value=1.3 Score=35.84 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=65.2
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
.++++|=.|++.|. ++..|+++ |++|+.++.++...+...+.+ + .++.++.+|+.+... -
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG-GAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 56789988876653 44445554 889999999987766655443 2 478999999877541 1
Q ss_pred CCccEEEEechhhc------cChhhHHH-----------HHHHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGMIEH------VGHDYMEE-----------FFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~~~~------~~~~~~~~-----------~l~~~~~~LkpgG~l~i~ 139 (272)
+..|+++.+..+.. .+.+++.. +.+.+...++++|+++..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 37899888754322 23333322 345556667778887764
No 409
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.73 E-value=3.3 Score=34.11 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=64.6
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHH-HHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEE-QLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------K 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~-~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~ 98 (272)
.++++|=.|++.|. ++..|+++ |++|+.++.++. ..+...+.++..+ .++.++.+|+.+.. .
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE-GANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789988876653 44445554 889999988754 3444444444443 47899999987753 0
Q ss_pred CCCccEEEEechhh-------ccChhhHHH-----------HHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIE-------HVGHDYMEE-----------FFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~-------~~~~~~~~~-----------~l~~~~~~LkpgG~l~i~ 139 (272)
-+..|+++.+.... .++.+++.. +.+.+...|+.+|+++..
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 13789998874332 123233322 455666777888887763
No 410
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=90.72 E-value=1.2 Score=36.16 Aligned_cols=105 Identities=11% Similarity=0.094 Sum_probs=65.5
Q ss_pred CCCCCEEEEECCC-chH----HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---------
Q 024096 32 VSKGQEVLDIGCG-WGT----LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--------- 97 (272)
Q Consensus 32 ~~~~~~vLDiG~G-~G~----~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--------- 97 (272)
..++.+||=.|++ +|+ ++..|+++ +++|+.++.+....+.+++.....+ ++.++.+|+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHc-CCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHH
Confidence 3467899999964 233 34444554 8899999888655555555544443 5788999987754
Q ss_pred --CCCCccEEEEechhhc-----------cChhhHHH-----------HHHHHHhcCccCcEEEEEe
Q 024096 98 --KANKYDRIISCGMIEH-----------VGHDYMEE-----------FFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 98 --~~~~fD~V~~~~~~~~-----------~~~~~~~~-----------~l~~~~~~LkpgG~l~i~~ 140 (272)
.-++.|+++.+..+.. .+.+++.. +.+.+...++++|++++..
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 1147899998765432 33333322 3455566677788877643
No 411
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=90.56 E-value=0.21 Score=44.82 Aligned_cols=76 Identities=9% Similarity=0.044 Sum_probs=53.7
Q ss_pred CCEEEEECCCchHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC---------------
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQTGC-KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK--------------- 98 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~--------------- 98 (272)
..+++|+-||.|+++.-+.+. |. .+.++|+++..++.-+.+.. ..+...++++|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhhhhccccccchhhHHhhh
Confidence 468999999999999988776 54 47899999987776665531 11234667788766531
Q ss_pred ---CCCccEEEEechhhcc
Q 024096 99 ---ANKYDRIISCGMIEHV 114 (272)
Q Consensus 99 ---~~~fD~V~~~~~~~~~ 114 (272)
...+|+|+.......+
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC
T ss_pred hhcCCCCCEEEecCCCcch
Confidence 1368999887655443
No 412
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.46 E-value=1.9 Score=35.10 Aligned_cols=75 Identities=16% Similarity=0.105 Sum_probs=56.1
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.|+++|=-|++.|. .+..+++. |++|+..|.+++..+...+.+...+ .++.++.+|+.+.. .-
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 57788888877663 44555654 8999999999998888777777766 47889999987643 23
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
++.|+++.+-.+
T Consensus 85 G~iDiLVNNAG~ 96 (255)
T 4g81_D 85 IHVDILINNAGI 96 (255)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 678999887543
No 413
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.33 E-value=0.19 Score=43.35 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=56.0
Q ss_pred CCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechh
Q 024096 34 KGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMI 111 (272)
Q Consensus 34 ~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~ 111 (272)
++.+|+=+|+|. |.....++...|++|+++|.++...+.+.+.... .+.....+..++. .-..+|+|+..-..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 348999999973 3344444544688999999999887777654321 2222222211111 11368999875443
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.... .+.-+.+...+.|+|||+++.
T Consensus 241 ~~~~--~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 241 PGRR--APILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp TTSS--CCCCBCHHHHTTSCTTCEEEE
T ss_pred CCCC--CCeecCHHHHhhCCCCCEEEE
Confidence 2210 000113345677899998775
No 414
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.31 E-value=0.19 Score=43.69 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=55.1
Q ss_pred CCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechh
Q 024096 34 KGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMI 111 (272)
Q Consensus 34 ~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~ 111 (272)
++.+|+=+|+|. |.....+++..|++|+++|.++...+.+++.. |. .+.....+..++. .-...|+|+..-..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999973 33444444447889999999998777665432 21 2222111111111 11357999874322
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
... +...-+.++..+.|||||+++.
T Consensus 242 p~~--~t~~li~~~~l~~mk~g~~iV~ 266 (377)
T 2vhw_A 242 PGA--KAPKLVSNSLVAHMKPGAVLVD 266 (377)
T ss_dssp TTS--CCCCCBCHHHHTTSCTTCEEEE
T ss_pred CCC--CCcceecHHHHhcCCCCcEEEE
Confidence 110 0001123456677899998875
No 415
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=90.19 E-value=0.79 Score=39.22 Aligned_cols=95 Identities=20% Similarity=0.251 Sum_probs=61.4
Q ss_pred cCCCCCCEEEEECCC-chHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccC------CCCCCCC
Q 024096 30 ARVSKGQEVLDIGCG-WGTLAIEIVKQT-GCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYR------QLPKANK 101 (272)
Q Consensus 30 l~~~~~~~vLDiG~G-~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~------~~~~~~~ 101 (272)
..+++|++||-+|+| .|..+..+++.. +++|+++|.+++..+.+++. |.. .++..+-. ++.....
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~v~~~~~g~g 254 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL----GAD---HVVDARRDPVKQVMELTRGRG 254 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT----TCS---EEEETTSCHHHHHHHHTTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh----CCC---EEEeccchHHHHHHHHhCCCC
Confidence 678899999999986 456777788776 99999999999888877642 431 22322111 1112237
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+|+|+-. .+... ...++...+. ++|++++.
T Consensus 255 ~Dvvid~-----~G~~~-~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 255 VNVAMDF-----VGSQA-TVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp EEEEEES-----SCCHH-HHHHGGGGEE--EEEEEEEC
T ss_pred CcEEEEC-----CCCch-HHHHHHHhhc--CCCEEEEE
Confidence 9999854 32210 1155556666 99998863
No 416
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.05 E-value=2.8 Score=35.23 Aligned_cols=88 Identities=17% Similarity=0.141 Sum_probs=56.8
Q ss_pred CCEEEEECCCch--HHHHHHHHccCC--EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC-CCCCCCccEEEEec
Q 024096 35 GQEVLDIGCGWG--TLAIEIVKQTGC--KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ-LPKANKYDRIISCG 109 (272)
Q Consensus 35 ~~~vLDiG~G~G--~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~-~~~~~~fD~V~~~~ 109 (272)
..+|.=||+|.= .++..+.+. +. +|+++|.+++.++.+.+ .|.. .-...|..+ .. ...|+|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~----~G~~---~~~~~~~~~~~~--~~aDvVila- 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD----LGII---DEGTTSIAKVED--FSPDFVMLS- 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH----TTSC---SEEESCTTGGGG--GCCSEEEEC-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHH----CCCc---chhcCCHHHHhh--ccCCEEEEe-
Confidence 368999999843 344455554 65 99999999987776653 2431 112233333 21 457999875
Q ss_pred hhhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 110 MIEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 110 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
++......+++++...++|+..++
T Consensus 102 ----vp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 102 ----SPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp ----SCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred ----CCHHHHHHHHHHHhhccCCCcEEE
Confidence 444455778889988898886553
No 417
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.03 E-value=0.33 Score=41.93 Aligned_cols=98 Identities=17% Similarity=0.172 Sum_probs=54.0
Q ss_pred CCCEEEEECCC-chHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-CCCCccEEEEechh
Q 024096 34 KGQEVLDIGCG-WGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-KANKYDRIISCGMI 111 (272)
Q Consensus 34 ~~~~vLDiG~G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-~~~~fD~V~~~~~~ 111 (272)
++.+|+=+|+| .|.....++...|++|+++|.++...+.+.+.. +. .+.....+..++. .-..+|+|+..-..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 46899999986 233334444446889999999998766654422 22 2222222211111 11357999875433
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
... +...-+.+...+.||+||.++.
T Consensus 240 ~~~--~~~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 240 PGA--KAPKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp --------CCSCHHHHTTSCTTCEEEE
T ss_pred Ccc--ccchhHHHHHHHhhcCCCEEEE
Confidence 210 0011124566778899998775
No 418
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.83 E-value=5.9 Score=32.18 Aligned_cols=112 Identities=13% Similarity=0.171 Sum_probs=68.8
Q ss_pred HHHHHHcCCCCCCEEEEECCCchH---HHHHHHHccCCEEEEEcC-CHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--
Q 024096 24 SVLIEKARVSKGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITL-SEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-- 97 (272)
Q Consensus 24 ~~l~~~l~~~~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~-s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-- 97 (272)
+.+...+.+ .++++|=.|++.|. ++..|+++ |++|+.++. +....+...+.++..+ .++.++.+|+.+..
T Consensus 21 ~~mm~~~~l-~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v 96 (271)
T 3v2g_A 21 QSMMTSISL-AGKTAFVTGGSRGIGAAIAKRLALE-GAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAI 96 (271)
T ss_dssp HHHHTTTCC-TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred hhhccccCC-CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHH
Confidence 334443343 46789999987653 44555554 889988855 4455555555555544 47899999987754
Q ss_pred ---------CCCCccEEEEechhhc------cChhhHH-----------HHHHHHHhcCccCcEEEEE
Q 024096 98 ---------KANKYDRIISCGMIEH------VGHDYME-----------EFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ---------~~~~fD~V~~~~~~~~------~~~~~~~-----------~~l~~~~~~LkpgG~l~i~ 139 (272)
.-++.|+++.+..+.. .+.+++. .+++.+...|+++|+++..
T Consensus 97 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 97 EQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 0137899998754322 2222222 2455566777888888764
No 419
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.69 E-value=0.11 Score=45.14 Aligned_cols=42 Identities=29% Similarity=0.359 Sum_probs=32.5
Q ss_pred CCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHH
Q 024096 34 KGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEI 75 (272)
Q Consensus 34 ~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~ 75 (272)
++.+|+=+|+|. |..+..++...|++|+++|.++...+.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 678999999994 445555555578999999999987776654
No 420
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.53 E-value=2.3 Score=34.23 Aligned_cols=103 Identities=16% Similarity=0.071 Sum_probs=63.1
Q ss_pred CCCEEEEECCCchHHHHHH----HHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------
Q 024096 34 KGQEVLDIGCGWGTLAIEI----VKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l----~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------- 98 (272)
.+.+||=.|+. |.++..+ ++..+.+|+.++.++...+...+.+...+ .++.++.+|+.+...
T Consensus 3 ~~k~vlITGas-ggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTGGN-KGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 45678877754 4444444 44137899999999877766666665544 468899999877530
Q ss_pred CCCccEEEEechhhccC------hhhHH-----------HHHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIEHVG------HDYME-----------EFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~------~~~~~-----------~~l~~~~~~LkpgG~l~i~ 139 (272)
-+.+|+|+.+....... .++.. .+++.+...++++|++++.
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 12789998765432211 12221 2445556666667777763
No 421
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.33 E-value=3.8 Score=33.76 Aligned_cols=103 Identities=16% Similarity=0.140 Sum_probs=65.4
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCC--HHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLS--EEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----------- 97 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s--~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----------- 97 (272)
.++++|=.|++.|. ++..|+++ |++|+.++.+ +...+...+.++..+ .++.++.+|+.+..
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE-GADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 46789988876553 44445554 8899998876 344555555555544 47899999987753
Q ss_pred CCCCccEEEEechhhc-------cChhhHH-----------HHHHHHHhcCccCcEEEEE
Q 024096 98 KANKYDRIISCGMIEH-------VGHDYME-----------EFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 ~~~~fD~V~~~~~~~~-------~~~~~~~-----------~~l~~~~~~LkpgG~l~i~ 139 (272)
.-+..|+++.+..... ++.+++. .+.+.+...++++|+++..
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 0147899988765422 2222222 2455566778888888764
No 422
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=89.30 E-value=2.3 Score=34.34 Aligned_cols=103 Identities=12% Similarity=0.098 Sum_probs=64.4
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEE-cCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGI-TLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gv-d~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------- 98 (272)
.+.++|=.|++.|. ++..|+++ |++|+.+ +.++...+...+.+...+ .++.++.+|+.+...
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQE-GANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789988887663 44555554 8899887 666666665555555444 478999999877540
Q ss_pred CCCccEEEEechhh-------ccChhhHH-----------HHHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIE-------HVGHDYME-----------EFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~-------~~~~~~~~-----------~~l~~~~~~LkpgG~l~i~ 139 (272)
-++.|+++.+.... ..+.+++. .+.+.+...|+++|+++..
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 13789998765432 22222222 2344555667777887763
No 423
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.19 E-value=4 Score=33.11 Aligned_cols=105 Identities=20% Similarity=0.227 Sum_probs=66.0
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcC-CHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITL-SEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~-s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------- 98 (272)
.+.++|=.|++.|. ++..|++. |++|+.++. ++...+...+.+...+ .++.++.+|+.+...
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRL-GAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876553 44445554 889988765 4555555555555544 478999999887540
Q ss_pred CCCccEEEEechhhc------cChhhHHH-----------HHHHHHhcCccCcEEEEEee
Q 024096 99 ANKYDRIISCGMIEH------VGHDYMEE-----------FFGCCESLLATHGLLVLQFI 141 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~------~~~~~~~~-----------~l~~~~~~LkpgG~l~i~~~ 141 (272)
-++.|+++.+..+.. .+.+++.. +.+.+...|+++|++++...
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 136899887654432 22233222 44566677788888876433
No 424
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=89.13 E-value=2.7 Score=34.23 Aligned_cols=74 Identities=18% Similarity=0.205 Sum_probs=56.8
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.|+.+|=-|.+.|. .+..+++. |++|+.+|.+++..+...+.++..| .++.++.+|+.+.. .-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47788888887774 45556664 8999999999998888888887766 47899999997754 12
Q ss_pred CCccEEEEech
Q 024096 100 NKYDRIISCGM 110 (272)
Q Consensus 100 ~~fD~V~~~~~ 110 (272)
++.|+++.+-.
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57899988653
No 425
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=88.85 E-value=2.1 Score=36.14 Aligned_cols=88 Identities=9% Similarity=-0.001 Sum_probs=59.5
Q ss_pred CCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEE
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRII 106 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~ 106 (272)
..+|+=+|+ |..+..+++. .+. ++.+|.+++.++ +++ ..+.++.+|..+.. .-+.+|.|+
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 458888887 5566666654 356 999999998777 543 25789999987654 246789888
Q ss_pred EechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
+.. ++++..-......+.+.|..+++..
T Consensus 183 ~~~-----~~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 183 VDL-----ESDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp ECC-----SSHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred EcC-----CccHHHHHHHHHHHHHCCCCeEEEE
Confidence 742 3233344555566777888777763
No 426
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.76 E-value=1.8 Score=34.37 Aligned_cols=88 Identities=10% Similarity=0.019 Sum_probs=57.2
Q ss_pred CCCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEE
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRI 105 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V 105 (272)
...+|+=+|+| ..+..+++. .+. |+++|.+++.++.++ . .+.++.+|..+.. .-...|.|
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhcCcchhcEE
Confidence 45689999885 555555554 356 999999987665543 1 4788999987643 23678998
Q ss_pred EEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 106 ISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
++.. +++.....+....+.+.|+..++.
T Consensus 76 i~~~-----~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 76 IVDL-----ESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp EECC-----SCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEcC-----CCcHHHHHHHHHHHHHCCCCeEEE
Confidence 8752 223334455556666778777765
No 427
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.70 E-value=5.2 Score=31.75 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=53.6
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.++++|=.|++.|. ++..|+++ |.+|+.++.++...+...+.++..+ .++.++.+|+.+.. ..
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK-GATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35678888866552 44445554 8899999999988877777776655 47899999987743 12
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
++.|+++.+..+
T Consensus 81 ~~id~li~~Ag~ 92 (247)
T 3lyl_A 81 LAIDILVNNAGI 92 (247)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999887654
No 428
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.31 E-value=0.18 Score=44.16 Aligned_cols=42 Identities=14% Similarity=0.252 Sum_probs=32.6
Q ss_pred CCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHH
Q 024096 34 KGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEI 75 (272)
Q Consensus 34 ~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~ 75 (272)
++.+|+=+|+|. |..+..++...|++|+++|.++...+.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 578999999994 445555565578999999999987776654
No 429
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.19 E-value=3.9 Score=33.64 Aligned_cols=100 Identities=18% Similarity=0.133 Sum_probs=67.1
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.|+.+|=-|++.|. .+..|++. |++|+.++.+++.++.+.+.+ + .+...+.+|+.+.. .-
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~-Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE-GARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57788888987774 45556664 899999999988776554433 3 46788899987753 12
Q ss_pred CCccEEEEechh------hccChhhHHH-----------HHHHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGMI------EHVGHDYMEE-----------FFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~~------~~~~~~~~~~-----------~l~~~~~~LkpgG~l~i~ 139 (272)
++.|+++.+-.+ ..++++++.. ..+.+...|+.+|.++..
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 578988877543 2233344333 445556778888887764
No 430
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.14 E-value=3.8 Score=33.84 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=65.8
Q ss_pred CCCEEEEECCC----chH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC----------
Q 024096 34 KGQEVLDIGCG----WGT-LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK---------- 98 (272)
Q Consensus 34 ~~~~vLDiG~G----~G~-~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~---------- 98 (272)
.+.++|=.|++ .|. ++..|++. |++|+.++.++...+...+.....+ ++.++.+|+.+...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999874 332 45555654 8999999998765555555554443 46889999877540
Q ss_pred -CCCccEEEEechhhc----------cChhhHHH-----------HHHHHHhcCccCcEEEEEe
Q 024096 99 -ANKYDRIISCGMIEH----------VGHDYMEE-----------FFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 99 -~~~fD~V~~~~~~~~----------~~~~~~~~-----------~l~~~~~~LkpgG~l~i~~ 140 (272)
-+..|+++.+..+.. .+.+++.. +.+.+...|+.+|+++...
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 147899998765432 22222222 4455566777788887643
No 431
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.98 E-value=2.1 Score=35.66 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=51.2
Q ss_pred CCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEE-cccCCCCCCCCccEEEEech
Q 024096 33 SKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYL-CDYRQLPKANKYDRIISCGM 110 (272)
Q Consensus 33 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~-~d~~~~~~~~~fD~V~~~~~ 110 (272)
-.+.+|+=+|+|. |......+...+.+|+++|.++...+.+.+ .| +.... .+..+. -...|+|+..-.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g----~~~~~~~~l~~~--l~~aDvVi~~~p 224 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE----MG----LVPFHTDELKEH--VKDIDICINTIP 224 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT----CEEEEGGGHHHH--STTCSEEEECCS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CC----CeEEchhhHHHH--hhCCCEEEECCC
Confidence 3678999999874 332233333368899999999865443322 23 23221 222222 256899998766
Q ss_pred hhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 111 IEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
.+.+. + .....+|||+.++
T Consensus 225 ~~~i~-~-------~~~~~mk~g~~li 243 (300)
T 2rir_A 225 SMILN-Q-------TVLSSMTPKTLIL 243 (300)
T ss_dssp SCCBC-H-------HHHTTSCTTCEEE
T ss_pred hhhhC-H-------HHHHhCCCCCEEE
Confidence 54332 1 2346789988765
No 432
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.84 E-value=2.5 Score=35.01 Aligned_cols=95 Identities=17% Similarity=0.137 Sum_probs=53.5
Q ss_pred HHHHcC-CCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEE-cccCCCCCCCCc
Q 024096 26 LIEKAR-VSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYL-CDYRQLPKANKY 102 (272)
Q Consensus 26 l~~~l~-~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~-~d~~~~~~~~~f 102 (272)
++.... .-.+.+|+=+|+|. |......+...|.+|+++|.++...+.+. ..| +.... .+..+. -...
T Consensus 145 ~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g----~~~~~~~~l~~~--l~~a 214 (293)
T 3d4o_A 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA----EMG----MEPFHISKAAQE--LRDV 214 (293)
T ss_dssp HHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----SEEEEGGGHHHH--TTTC
T ss_pred HHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC----CeecChhhHHHH--hcCC
Confidence 344433 23678999999874 33333333336889999999986544432 223 23221 122221 2568
Q ss_pred cEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 103 DRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 103 D~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
|+|+..-..+.+. .. ....+|||+.++-
T Consensus 215 DvVi~~~p~~~i~----~~----~l~~mk~~~~lin 242 (293)
T 3d4o_A 215 DVCINTIPALVVT----AN----VLAEMPSHTFVID 242 (293)
T ss_dssp SEEEECCSSCCBC----HH----HHHHSCTTCEEEE
T ss_pred CEEEECCChHHhC----HH----HHHhcCCCCEEEE
Confidence 9999865543332 12 3346789887653
No 433
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.71 E-value=0.25 Score=43.02 Aligned_cols=42 Identities=24% Similarity=0.253 Sum_probs=31.1
Q ss_pred CCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHH
Q 024096 34 KGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEI 75 (272)
Q Consensus 34 ~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~ 75 (272)
++.+|+=+|+|. |..+..+++..|++|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 688999999984 444555555578899999998866655543
No 434
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=87.56 E-value=0.62 Score=50.26 Aligned_cols=99 Identities=22% Similarity=0.312 Sum_probs=66.9
Q ss_pred HHcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc---ccC----CCCC
Q 024096 28 EKARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLC---DYR----QLPK 98 (272)
Q Consensus 28 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~---d~~----~~~~ 98 (272)
+...+++|.+||=.|+ |.|..+..+++..|++|++++.+++..+.+++.....|.. +++.. ++. +...
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~---~v~~~~~~~~~~~i~~~t~ 1737 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDET---CFANSRDTSFEQHVLRHTA 1737 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCST---TEEESSSSHHHHHHHHTTT
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCce---EEecCCCHHHHHHHHHhcC
Confidence 4456789999999964 5788888999888899999999988777776543222221 12211 111 1112
Q ss_pred CCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 99 ANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
...+|+|+-. .+ ...+....+.|+++|+++.
T Consensus 1738 g~GvDvVld~-----~g----~~~l~~~l~~L~~~Gr~V~ 1768 (2512)
T 2vz8_A 1738 GKGVDLVLNS-----LA----EEKLQASVRCLAQHGRFLE 1768 (2512)
T ss_dssp SCCEEEEEEC-----CC----HHHHHHHHTTEEEEEEEEE
T ss_pred CCCceEEEEC-----CC----chHHHHHHHhcCCCcEEEE
Confidence 3469999863 22 3457888899999999886
No 435
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.39 E-value=6.4 Score=31.93 Aligned_cols=85 Identities=16% Similarity=0.137 Sum_probs=53.4
Q ss_pred EEEEECCCchH--HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhhcc
Q 024096 37 EVLDIGCGWGT--LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIEHV 114 (272)
Q Consensus 37 ~vLDiG~G~G~--~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~~ 114 (272)
+|.=||+|.=+ ++..+.+ .+.+|+++|.+++..+.+.+ .|... . ...|..+. ...|+|+.. +
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~~~~~~~~~----~g~~~--~-~~~~~~~~---~~~D~vi~a-----v 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-RGHYLIGVSRQQSTCEKAVE----RQLVD--E-AGQDLSLL---QTAKIIFLC-----T 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHH----TTSCS--E-EESCGGGG---TTCSEEEEC-----S
T ss_pred EEEEEcCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHh----CCCCc--c-ccCCHHHh---CCCCEEEEE-----C
Confidence 67889988532 3334444 36799999999887766542 34321 1 12333332 468999875 4
Q ss_pred ChhhHHHHHHHHHhcCccCcEEE
Q 024096 115 GHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 115 ~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
+......+++++...++++..++
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 66 PIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEE
Confidence 44455778888888888876553
No 436
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=87.04 E-value=6.6 Score=31.72 Aligned_cols=72 Identities=14% Similarity=0.216 Sum_probs=49.2
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC------CCCCccE
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP------KANKYDR 104 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~------~~~~fD~ 104 (272)
.|+++|=-|.+.|. .+..|++. |++|+..|.+.. +.+.+.++..+ .++.++.+|+.+.. ...+.|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAA-GAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 47778877877764 45566665 899999998743 23334444545 47889999987654 2367899
Q ss_pred EEEech
Q 024096 105 IISCGM 110 (272)
Q Consensus 105 V~~~~~ 110 (272)
++.+-.
T Consensus 83 LVNNAG 88 (247)
T 4hp8_A 83 LVNNAG 88 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 888754
No 437
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.99 E-value=8.8 Score=29.46 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=53.6
Q ss_pred CEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccEEEEech
Q 024096 36 QEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDRIISCGM 110 (272)
Q Consensus 36 ~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~V~~~~~ 110 (272)
++||=.|+ +|.++..+++. .+.+|++++-++...... . .+++++.+|+.+.. .-..+|+|+....
T Consensus 1 MkvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 1 MKIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------H--KDINILQKDIFDLTLSDLSDQNVVVDAYG 70 (221)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------C--SSSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CeEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------c--CCCeEEeccccChhhhhhcCCCEEEECCc
Confidence 36787775 34444444332 478999999887543322 1 36899999998765 2246899998765
Q ss_pred hhccChhhHHHHHHHHHhcCcc--CcEEEEE
Q 024096 111 IEHVGHDYMEEFFGCCESLLAT--HGLLVLQ 139 (272)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~~Lkp--gG~l~i~ 139 (272)
...-..+.......++.+.++. .+++++.
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CCccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 4221111122333444444443 3566653
No 438
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=86.85 E-value=2.3 Score=29.21 Aligned_cols=66 Identities=14% Similarity=0.118 Sum_probs=42.4
Q ss_pred CCCEEEEECCCchHHHHHHHHc---cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----CCCCccEE
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ---TG-CKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP----KANKYDRI 105 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~---~~-~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~----~~~~fD~V 105 (272)
.+.+|+=+|+| ..+..+++. .+ .+|+++|.++...+... . ..+.+...|..+.. .-..+|+|
T Consensus 4 ~~~~v~I~G~G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGAG--KIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TCEEEEEECCS--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CcCeEEEECCC--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEE
Confidence 35689999995 333333322 36 78999999987666554 1 25677888876533 12467888
Q ss_pred EEec
Q 024096 106 ISCG 109 (272)
Q Consensus 106 ~~~~ 109 (272)
+..-
T Consensus 74 i~~~ 77 (118)
T 3ic5_A 74 ISAA 77 (118)
T ss_dssp EECS
T ss_pred EECC
Confidence 8754
No 439
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.29 E-value=3 Score=35.70 Aligned_cols=94 Identities=16% Similarity=0.256 Sum_probs=57.6
Q ss_pred CCEEEEECCCc-hH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH------cCCCCCeEEEEcccCCCCCCCCccEEE
Q 024096 35 GQEVLDIGCGW-GT-LAIEIVKQTGCKYTGITLSEEQLKYAEIKVRE------AGLQDHIRFYLCDYRQLPKANKYDRII 106 (272)
Q Consensus 35 ~~~vLDiG~G~-G~-~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~------~g~~~~i~~~~~d~~~~~~~~~fD~V~ 106 (272)
.++|.=||+|. |. ++..+++ .+.+|+.++.+++.++..++.-.. ..++.++.+. .|..+. -...|+|+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~-~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea--~~~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR-KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS--LEGVTDIL 104 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT-TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH--HTTCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH--HhcCCEEE
Confidence 46899999984 33 4444554 377899999999887766553110 0111223221 222111 14578888
Q ss_pred EechhhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
.. ++......+++++...++|+..++
T Consensus 105 la-----Vp~~~~~~vl~~i~~~l~~~~ivv 130 (356)
T 3k96_A 105 IV-----VPSFAFHEVITRMKPLIDAKTRIA 130 (356)
T ss_dssp EC-----CCHHHHHHHHHHHGGGCCTTCEEE
T ss_pred EC-----CCHHHHHHHHHHHHHhcCCCCEEE
Confidence 74 444556888999999998887654
No 440
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.21 E-value=8 Score=31.60 Aligned_cols=88 Identities=22% Similarity=0.228 Sum_probs=54.1
Q ss_pred CEEEEECCCchH--HHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 36 QEVLDIGCGWGT--LAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 36 ~~vLDiG~G~G~--~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
.+|.=||+|.=+ ++..+++. .+.+|+++|.++...+.+.+ .|... ....|..+.. ...|+|+..
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~---~~~~~~~~~~--~~aDvVila---- 73 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD---EATADFKVFA--ALADVIILA---- 73 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS---EEESCTTTTG--GGCSEEEEC----
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc---cccCCHHHhh--cCCCEEEEc----
Confidence 579999998533 34445544 36799999999887765543 23211 1222332221 457998875
Q ss_pred ccChhhHHHHHHHHHhc-CccCcEEE
Q 024096 113 HVGHDYMEEFFGCCESL-LATHGLLV 137 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~-LkpgG~l~ 137 (272)
++......+++++... ++++..++
T Consensus 74 -vp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 74 -VPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp -SCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred -CCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 4444446778888877 88775554
No 441
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=85.71 E-value=1.3 Score=38.97 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=55.3
Q ss_pred HHHHHHcC-CCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCC
Q 024096 24 SVLIEKAR-VSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANK 101 (272)
Q Consensus 24 ~~l~~~l~-~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 101 (272)
+.+.+..+ .-.|.+|+=+|+|. |......++..|++|+++|.++.....+. ..| ..+ .++.+.- ..
T Consensus 208 ~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~----~~G----~~v--~~Leeal--~~ 275 (435)
T 3gvp_A 208 DGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC----MDG----FRL--VKLNEVI--RQ 275 (435)
T ss_dssp HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTT----CEE--CCHHHHT--TT
T ss_pred HHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH----HcC----CEe--ccHHHHH--hc
Confidence 34444443 34789999999995 33333344447999999999986444332 222 222 2333322 46
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.|+|+....-.++- -++....||+|+.++-
T Consensus 276 ADIVi~atgt~~lI-------~~e~l~~MK~gailIN 305 (435)
T 3gvp_A 276 VDIVITCTGNKNVV-------TREHLDRMKNSCIVCN 305 (435)
T ss_dssp CSEEEECSSCSCSB-------CHHHHHHSCTTEEEEE
T ss_pred CCEEEECCCCcccC-------CHHHHHhcCCCcEEEE
Confidence 79998853323321 1234556899987764
No 442
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.66 E-value=2.8 Score=37.32 Aligned_cols=90 Identities=11% Similarity=0.057 Sum_probs=58.5
Q ss_pred CCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----CCCCccEEE
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----KANKYDRII 106 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----~~~~fD~V~ 106 (272)
.++|+=+|||. .+..+++. .+..|+.+|.+++.++.+.+.+ .+..++||..+.. .-+..|+++
T Consensus 3 ~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 57888888873 44445543 3678999999999888776542 4788999988765 347899998
Q ss_pred EechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
+.. ++++..-+...+.+.+-+.-+.+.
T Consensus 74 a~t-----~~De~Nl~~~~~Ak~~~~~~~~ia 100 (461)
T 4g65_A 74 AVT-----NTDETNMAACQVAFTLFNTPNRIA 100 (461)
T ss_dssp ECC-----SCHHHHHHHHHHHHHHHCCSSEEE
T ss_pred EEc-----CChHHHHHHHHHHHHhcCCcccee
Confidence 742 112233344445555544444443
No 443
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.35 E-value=3.7 Score=33.24 Aligned_cols=77 Identities=22% Similarity=0.176 Sum_probs=52.9
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------CCCCcc
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------KANKYD 103 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------~~~~fD 103 (272)
.++++|=.|++.|. ++..++++ |++|+.++.++...+...+.+...+....+.++.+|+.+.. .-++.|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAE-GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 46788888876542 34444554 89999999998877776666655543346788899987643 124789
Q ss_pred EEEEechh
Q 024096 104 RIISCGMI 111 (272)
Q Consensus 104 ~V~~~~~~ 111 (272)
+++.+..+
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99887544
No 444
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.09 E-value=8.7 Score=31.19 Aligned_cols=88 Identities=19% Similarity=0.241 Sum_probs=53.4
Q ss_pred CEEEEECCCc-hH-HHHHHHHccCC--EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC-CccEEEEech
Q 024096 36 QEVLDIGCGW-GT-LAIEIVKQTGC--KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN-KYDRIISCGM 110 (272)
Q Consensus 36 ~~vLDiG~G~-G~-~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~-~fD~V~~~~~ 110 (272)
.+|.=||+|. |. ++..+++. +. +|+++|.++...+.+++ .|... . ...|..+.. . ..|+|+..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~----~g~~~--~-~~~~~~~~~--~~~aDvVila-- 69 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD----LGIID--E-GTTSIAKVE--DFSPDFVMLS-- 69 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH----TTSCS--E-EESCGGGGG--GTCCSEEEEC--
T ss_pred cEEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHH----CCCcc--c-ccCCHHHHh--cCCCCEEEEc--
Confidence 3688899884 32 33344443 55 89999999987766543 34311 1 122332221 3 67999874
Q ss_pred hhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 111 IEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
++......+++++...++++..++.
T Consensus 70 ---vp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 70 ---SPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp ---SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ---CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 4444456788888888888875543
No 445
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.90 E-value=5.2 Score=33.45 Aligned_cols=91 Identities=18% Similarity=0.193 Sum_probs=55.2
Q ss_pred CCCEEEEECCCc-hH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC---CCeEEE-----EcccCCCCCCCCcc
Q 024096 34 KGQEVLDIGCGW-GT-LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQ---DHIRFY-----LCDYRQLPKANKYD 103 (272)
Q Consensus 34 ~~~~vLDiG~G~-G~-~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~---~~i~~~-----~~d~~~~~~~~~fD 103 (272)
...+|.=||+|. |. ++..|++. +.+|+.+ .+++.++..++. |+. ....+. ..|.. ....+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~~~~~~~i~~~----g~~~~~~~~~~~~~~~~~~~~~---~~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA-GHEVILI-ARPQHVQAIEAT----GLRLETQSFDEQVKVSASSDPS---AVQGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CCHHHHHHHHHH----CEEEECSSCEEEECCEEESCGG---GGTTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC-CCeEEEE-EcHhHHHHHHhC----CeEEEcCCCcEEEeeeeeCCHH---HcCCCC
Confidence 346899999994 32 44555554 7799999 888777766543 210 001110 11111 125689
Q ss_pred EEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 104 RIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 104 ~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
+|+..- +......+++.+...++|+..++.
T Consensus 89 ~vilav-----k~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 89 LVLFCV-----KSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp EEEECC-----CGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred EEEEEc-----ccccHHHHHHHHHHhcCCCCEEEE
Confidence 998753 333457889999999998876654
No 446
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=84.89 E-value=5.4 Score=32.18 Aligned_cols=103 Identities=12% Similarity=0.101 Sum_probs=61.9
Q ss_pred CCCEEEEECCCchHHHHHHHHc---cCCEEEEEcCC---HHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----------
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLS---EEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---------- 97 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s---~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---------- 97 (272)
.+.++|=.|++.| ++..+++. .|++|+.++.+ ....+...+.+...+ .++.++.+|+.+..
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 4678898887655 33333333 48899988654 344444444444433 47899999988754
Q ss_pred -CCCCccEEEEechhh------ccChhhHHH-----------HHHHHHhcCccCcEEEEE
Q 024096 98 -KANKYDRIISCGMIE------HVGHDYMEE-----------FFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 98 -~~~~fD~V~~~~~~~------~~~~~~~~~-----------~l~~~~~~LkpgG~l~i~ 139 (272)
.-++.|+++.+..+. ..+.+++.. +.+.+...|+++|++++.
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 014789998875432 222233222 344555666778887763
No 447
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.82 E-value=3 Score=35.18 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=63.3
Q ss_pred CCCEEEEECCCchH--HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc-------CC-CC---------CeEEEEcccC
Q 024096 34 KGQEVLDIGCGWGT--LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA-------GL-QD---------HIRFYLCDYR 94 (272)
Q Consensus 34 ~~~~vLDiG~G~G~--~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~-------g~-~~---------~i~~~~~d~~ 94 (272)
...+|-=||+|+=+ ++..++. .|.+|+.+|++++.++.+.+++++. +. .. ++.+ ..|+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH-TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchH
Confidence 34689999999654 4444555 4899999999999988887766432 21 11 1222 12221
Q ss_pred CCCCCCCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecC
Q 024096 95 QLPKANKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISA 143 (272)
Q Consensus 95 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 143 (272)
+ .-...|+|+ -.+.+.+ +-..++++++..+++|+..|.-++.+.
T Consensus 83 ~--a~~~ad~Vi-Eav~E~l--~iK~~lf~~l~~~~~~~aIlaSNTSsl 126 (319)
T 3ado_A 83 E--AVEGVVHIQ-ECVPENL--DLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp H--HTTTEEEEE-ECCCSCH--HHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred h--HhccCcEEe-eccccHH--HHHHHHHHHHHHHhhhcceeehhhhhc
Confidence 1 113456654 3344544 445789999999999988776544443
No 448
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=84.68 E-value=3 Score=40.86 Aligned_cols=74 Identities=14% Similarity=0.140 Sum_probs=52.1
Q ss_pred CCCEEEEECCCchHHHHHHHHccCC--EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCC----------------
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQTGC--KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQ---------------- 95 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~---------------- 95 (272)
...+++|+-||.|+++.-+.+. |. .+.++|+++..++.-+.|. +...++.+|+.+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~------p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNN------PGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHC------TTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC------CCCccccccHHHHhhhccchhhhhhhhh
Confidence 4469999999999999988876 64 5779999998877766553 244566666422
Q ss_pred -CCCCCCccEEEEechhhcc
Q 024096 96 -LPKANKYDRIISCGMIEHV 114 (272)
Q Consensus 96 -~~~~~~fD~V~~~~~~~~~ 114 (272)
++..+.+|+|+....-..+
T Consensus 612 ~lp~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTTC
T ss_pred hcccCCCeeEEEEcCCCcch
Confidence 2223578999987654433
No 449
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.67 E-value=15 Score=30.04 Aligned_cols=89 Identities=15% Similarity=0.186 Sum_probs=54.3
Q ss_pred CEEEEECCCchH--HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEE--------c---ccCCCC-CCCC
Q 024096 36 QEVLDIGCGWGT--LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYL--------C---DYRQLP-KANK 101 (272)
Q Consensus 36 ~~vLDiG~G~G~--~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~--------~---d~~~~~-~~~~ 101 (272)
++|.=||+|.-+ ++..|++ .+.+|+.+|.+++..+..++. |. .... . +..+.. .-..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~----g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ-GGNDVTLIDQWPAHIEAIRKN----GL----IADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHH----CE----EEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHh-CCCcEEEEECCHHHHHHHHhC----CE----EEEeCCCeeEecceeecchhhcccCCC
Confidence 479999998433 3344554 377999999998877665543 31 1111 0 111111 1126
Q ss_pred ccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 102 YDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 102 fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
.|+|+..- +......+++.+...++|+..++.
T Consensus 75 ~d~vi~~v-----~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 75 VDLIIALT-----KAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CSEEEECS-----CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCEEEEEe-----ccccHHHHHHHHHHhcCCCCEEEE
Confidence 89998853 334457788888888888766553
No 450
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.54 E-value=6.2 Score=31.99 Aligned_cols=77 Identities=19% Similarity=0.269 Sum_probs=52.9
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
.+.+||=.|++.|. ++..|++ .|.+|++++.++...+...+.+...+.+.++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQ-QGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 46788888865442 3334444 4889999999988777666666665554578889999876541 1
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+.+|+|+.+..+
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999887543
No 451
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=84.47 E-value=5.6 Score=32.03 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=43.9
Q ss_pred CCCEEEEECCCc-hHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------C
Q 024096 34 KGQEVLDIGCGW-GTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------K 98 (272)
Q Consensus 34 ~~~~vLDiG~G~-G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~ 98 (272)
.+.++|=.|++. |+++..+++. .+++|+.++.++...+...+.....+ ...++.+|+.+.. .
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHHH
Confidence 467888888651 4444444332 48899999887622222222222222 3478889987643 1
Q ss_pred CCCccEEEEechh
Q 024096 99 ANKYDRIISCGMI 111 (272)
Q Consensus 99 ~~~fD~V~~~~~~ 111 (272)
-+..|+++.+..+
T Consensus 85 ~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 85 WPKFDGFVHSIGF 97 (265)
T ss_dssp CSSEEEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1378999887654
No 452
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=84.37 E-value=0.38 Score=39.35 Aligned_cols=54 Identities=7% Similarity=0.020 Sum_probs=37.1
Q ss_pred eEEEEcccCCCC---CCCCccEEEEechhhcc--------Ch----hhHHHHHHHHHhcCccCcEEEEE
Q 024096 86 IRFYLCDYRQLP---KANKYDRIISCGMIEHV--------GH----DYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 86 i~~~~~d~~~~~---~~~~fD~V~~~~~~~~~--------~~----~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..++++|..+.. ++++||+|++......- .. +.....++++.++|+|+|.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 456778864432 45689999998765322 01 13456788889999999999886
No 453
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=84.35 E-value=6.1 Score=31.45 Aligned_cols=75 Identities=13% Similarity=0.153 Sum_probs=54.2
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
.+.+||=.|++.|. ++..|+++ |.+|+.++.++...+...+.+...+ .++.++.+|+.+... -
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALARE-GAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789988876552 44455554 8899999999988877777666554 478899999887540 1
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+..|+++.+..+
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987654
No 454
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.35 E-value=6.6 Score=31.62 Aligned_cols=74 Identities=19% Similarity=0.157 Sum_probs=54.8
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.++++|=.|++.|. ++..|+++ |++|+.++.++...+...+.+...+ .++.++.+|+.+.. .-
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789988887653 44555554 8899999999988877777776654 47899999988754 12
Q ss_pred CCccEEEEech
Q 024096 100 NKYDRIISCGM 110 (272)
Q Consensus 100 ~~fD~V~~~~~ 110 (272)
++.|+++.+..
T Consensus 87 g~id~lv~nAg 97 (264)
T 3ucx_A 87 GRVDVVINNAF 97 (264)
T ss_dssp SCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 47899988753
No 455
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=84.26 E-value=9.1 Score=31.12 Aligned_cols=103 Identities=17% Similarity=0.221 Sum_probs=60.8
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHH-HHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEE-QLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~-~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------- 98 (272)
.+.++|=.|++.|. ++..|++ .|.+|+.++.++. ..+...+.+...+ .++.++.+|+.+...
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGR-RGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35678877775542 3334444 4889999987753 2344334444433 368889999876430
Q ss_pred CCCccEEEEechhhcc------ChhhHHH-----------HHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIEHV------GHDYMEE-----------FFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~~------~~~~~~~-----------~l~~~~~~LkpgG~l~i~ 139 (272)
-+..|+++.+..+... +.+++.. +++.+...|+.+|+++..
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 1368999887654322 2232222 345556666677888764
No 456
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.26 E-value=5 Score=33.55 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=55.6
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.+.+||=.|++.|. ++..|+++ |.+|++++.++...+.+.+.+...+...++.++.+|+.+.. .-
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ-GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 46789999887553 44445554 88999999999888877777766554347899999987753 01
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+..|+++.+..+
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987654
No 457
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=83.94 E-value=2 Score=35.50 Aligned_cols=55 Identities=16% Similarity=-0.068 Sum_probs=36.4
Q ss_pred EcccCCCCCCCCccEEEEechhhccChh---------hHHHHHHHHHhcCccCcEEEEEeecCC
Q 024096 90 LCDYRQLPKANKYDRIISCGMIEHVGHD---------YMEEFFGCCESLLATHGLLVLQFISAP 144 (272)
Q Consensus 90 ~~d~~~~~~~~~fD~V~~~~~~~~~~~~---------~~~~~l~~~~~~LkpgG~l~i~~~~~~ 144 (272)
..|+...+..+++|+|++.-.-..-+.. ...-+++...++|+|||.+++-.+...
T Consensus 195 ~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 195 RLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred ccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 6666664444779999998543222222 122356777899999999999766654
No 458
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=83.68 E-value=2.9 Score=37.00 Aligned_cols=97 Identities=10% Similarity=0.029 Sum_probs=56.2
Q ss_pred HHHHHHHcC-CCCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC
Q 024096 23 VSVLIEKAR-VSKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 23 ~~~l~~~l~-~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 100 (272)
++.+.+..+ .-.|.+|+=+|+|. |......++..|++|+++|.++.....+. ..| +++. ++.+.- .
T Consensus 234 vdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~----~~G----~~vv--~LeElL--~ 301 (464)
T 3n58_A 234 VDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA----MDG----FEVV--TLDDAA--S 301 (464)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH----HTT----CEEC--CHHHHG--G
T ss_pred HHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH----hcC----ceec--cHHHHH--h
Confidence 344444443 34789999999985 44444444447999999999986443332 222 2332 333322 4
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
..|+|+....-.|+ +-++....||||++++-
T Consensus 302 ~ADIVv~atgt~~l-------I~~e~l~~MK~GAILIN 332 (464)
T 3n58_A 302 TADIVVTTTGNKDV-------ITIDHMRKMKDMCIVGN 332 (464)
T ss_dssp GCSEEEECCSSSSS-------BCHHHHHHSCTTEEEEE
T ss_pred hCCEEEECCCCccc-------cCHHHHhcCCCCeEEEE
Confidence 57998875332333 11344566899988764
No 459
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.67 E-value=7.2 Score=31.56 Aligned_cols=103 Identities=13% Similarity=0.104 Sum_probs=64.2
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEE-cCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGI-TLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gv-d~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------- 98 (272)
.+.++|=.|++.|. ++..|++. |++|+.+ ..++...+...+.+...+ .++.++.+|+.+...
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789988877663 44555554 8888876 445555555555555544 478999999877540
Q ss_pred CCCccEEEEechhhc------cChhhHH-----------HHHHHHHhcCccCcEEEEE
Q 024096 99 ANKYDRIISCGMIEH------VGHDYME-----------EFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 99 ~~~fD~V~~~~~~~~------~~~~~~~-----------~~l~~~~~~LkpgG~l~i~ 139 (272)
-++.|+++.+..+.. .+.+++. .+++.+...++++|+++..
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 147899988764432 2222222 2445566667778888764
No 460
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.58 E-value=8.4 Score=29.75 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=56.2
Q ss_pred CEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC--CCCCccEEEEech
Q 024096 36 QEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP--KANKYDRIISCGM 110 (272)
Q Consensus 36 ~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~fD~V~~~~~ 110 (272)
++||=.|+ +|.++..+++. .+.+|++++-++...... ...+++++.+|+.+.. .-..+|+|+....
T Consensus 1 MkilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhhcccCCEEEECCc
Confidence 36787875 45544444443 478999999987654322 1247899999998765 2246899988765
Q ss_pred hhccC--hhhHHHHHHHHHhcCcc-CcEEEEE
Q 024096 111 IEHVG--HDYMEEFFGCCESLLAT-HGLLVLQ 139 (272)
Q Consensus 111 ~~~~~--~~~~~~~l~~~~~~Lkp-gG~l~i~ 139 (272)
..+-+ .........++.+.++. |+++++.
T Consensus 72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 43111 11123344555555544 4566553
No 461
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.41 E-value=0.58 Score=39.58 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=40.0
Q ss_pred CeEEE-EcccCCCC---CCCCccEEEEechhhcc------Ch---hhHHHHHHHHHhcCccCcEEEEEe
Q 024096 85 HIRFY-LCDYRQLP---KANKYDRIISCGMIEHV------GH---DYMEEFFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 85 ~i~~~-~~d~~~~~---~~~~fD~V~~~~~~~~~------~~---~~~~~~l~~~~~~LkpgG~l~i~~ 140 (272)
...++ ++|..+.. +++++|+|++......- .. ......+.++.++|+|||.+++..
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 45777 99976532 45789999998765421 00 134677888999999999999853
No 462
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.38 E-value=7.2 Score=32.19 Aligned_cols=76 Identities=22% Similarity=0.275 Sum_probs=55.8
Q ss_pred CCCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------
Q 024096 33 SKGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------- 98 (272)
-.+.+||=.|++.|. ++..|+++ |.+|+.++.++...+.+.+.+...+ .++.++.+|+.+...
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARR-GARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 357789999987653 44455554 8899999999988887777776654 478999999887540
Q ss_pred CCCccEEEEechh
Q 024096 99 ANKYDRIISCGMI 111 (272)
Q Consensus 99 ~~~fD~V~~~~~~ 111 (272)
.+..|+++.+..+
T Consensus 106 ~g~id~lvnnAg~ 118 (301)
T 3tjr_A 106 LGGVDVVFSNAGI 118 (301)
T ss_dssp HSSCSEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 1378999987554
No 463
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.16 E-value=16 Score=29.73 Aligned_cols=84 Identities=13% Similarity=0.185 Sum_probs=53.4
Q ss_pred CEEEEECC-Cc-hH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 36 QEVLDIGC-GW-GT-LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 36 ~~vLDiG~-G~-G~-~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
.+|.=||+ |. |. ++..+++ .+.+|+++|.+++..+.+.+ .|. .. .+..+ .....|+|+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~----~g~----~~--~~~~~--~~~~aDvVi~a---- 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-SAHHLAAIEIAPEGRDRLQG----MGI----PL--TDGDG--WIDEADVVVLA---- 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-SSSEEEEECCSHHHHHHHHH----TTC----CC--CCSSG--GGGTCSEEEEC----
T ss_pred CEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHh----cCC----Cc--CCHHH--HhcCCCEEEEc----
Confidence 48999999 84 32 3444554 47799999999887766544 232 11 12221 12468999875
Q ss_pred ccChhhHHHHHHHHHhcCccCcEEE
Q 024096 113 HVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
+++.....+++++...++++..++
T Consensus 75 -v~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 75 -LPDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp -SCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred -CCchHHHHHHHHHHHhCCCCCEEE
Confidence 444445778888888888776544
No 464
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.97 E-value=3.9 Score=32.81 Aligned_cols=75 Identities=19% Similarity=0.088 Sum_probs=54.4
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------AN 100 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------~~ 100 (272)
.+.++|=.|++.|. ++..++++ |++|+.++.++...+...+.+...+ .++.++.+|+.+... .+
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 46788888887663 44555554 8899999999887777777766654 478999999877540 04
Q ss_pred CccEEEEechh
Q 024096 101 KYDRIISCGMI 111 (272)
Q Consensus 101 ~fD~V~~~~~~ 111 (272)
..|+++.+..+
T Consensus 83 ~id~lv~nAg~ 93 (252)
T 3h7a_A 83 PLEVTIFNVGA 93 (252)
T ss_dssp CEEEEEECCCC
T ss_pred CceEEEECCCc
Confidence 78999887654
No 465
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.95 E-value=6.7 Score=31.44 Aligned_cols=75 Identities=16% Similarity=0.152 Sum_probs=54.2
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
.+.++|=.|++.|. ++..++++ |++|+.++.++...+...+.+...+ .++.++.+|+.+... -
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888876653 44455554 8899999999988777777666654 478999999877540 1
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
++.|+++.+..+
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999887654
No 466
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=82.49 E-value=0.21 Score=47.87 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=58.8
Q ss_pred HcCCCCCCEEEEECC--CchHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-------CCC
Q 024096 29 KARVSKGQEVLDIGC--GWGTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-------PKA 99 (272)
Q Consensus 29 ~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-------~~~ 99 (272)
...+++|++||=.|+ |.|..+..+++..|++|++++.++ ..+..+ .|. -+++...-.++ ...
T Consensus 340 ~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~-----lga---~~v~~~~~~~~~~~i~~~t~g 410 (795)
T 3slk_A 340 LAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE-----LSR---EHLASSRTCDFEQQFLGATGG 410 (795)
T ss_dssp CTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC-----SCG---GGEECSSSSTHHHHHHHHSCS
T ss_pred HhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh-----cCh---hheeecCChhHHHHHHHHcCC
Confidence 345789999999984 578899999998889999998554 211111 221 11121111111 123
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEE
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQ 139 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 139 (272)
..+|+|+-.- +. ..++...+.|+|+|+++..
T Consensus 411 ~GvDvVld~~-----gg----~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 411 RGVDVVLNSL-----AG----EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SCCSEEEECC-----CT----TTTHHHHTSCTTCEEEEEC
T ss_pred CCeEEEEECC-----Cc----HHHHHHHHHhcCCCEEEEe
Confidence 5799998742 21 2456778899999999863
No 467
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=82.11 E-value=2.5 Score=30.20 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=49.3
Q ss_pred CCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC---C--CCCccEEE
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---K--ANKYDRII 106 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---~--~~~fD~V~ 106 (272)
+.+|+=+|+| ..+..+++. .+.+|+.+|.++...+.+++ . ...++.+|..+.. . ...+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y----ATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----T----CSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h----CCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 4579999985 344333332 47789999998865543321 1 2456777765432 1 24689988
Q ss_pred EechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 107 SCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
..-.-. ......+....+.+.+. .++.
T Consensus 76 ~~~~~~----~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 76 VAIGAN----IQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp ECCCSC----HHHHHHHHHHHHHTTCS-EEEE
T ss_pred ECCCCc----hHHHHHHHHHHHHcCCC-eEEE
Confidence 753221 11222344444445665 5554
No 468
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=82.10 E-value=6.7 Score=31.52 Aligned_cols=76 Identities=18% Similarity=0.258 Sum_probs=54.0
Q ss_pred CCCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------
Q 024096 33 SKGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------- 98 (272)
-.+.+||=.|++.|. ++..|++ .|.+|+.++.++...+...+.+...+ .++.++.+|+.+...
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGS-LGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 356788888876542 3344444 48899999999988877777776654 478999999877540
Q ss_pred CCCccEEEEechh
Q 024096 99 ANKYDRIISCGMI 111 (272)
Q Consensus 99 ~~~fD~V~~~~~~ 111 (272)
-++.|+++.+..+
T Consensus 104 ~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 104 HGRCDVLVNNAGV 116 (262)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468999987654
No 469
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=81.60 E-value=7.8 Score=31.55 Aligned_cols=75 Identities=16% Similarity=0.193 Sum_probs=53.1
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.+.++|=.|++.|. ++..|+++ |++|+.++.++...+...+.+...+ .++.++.+|+.+.. .-
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46789989876653 44455554 8999999999988777776666544 47899999987753 01
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
++.|+++.+..+
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 478999887544
No 470
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.59 E-value=15 Score=29.49 Aligned_cols=87 Identities=18% Similarity=0.204 Sum_probs=53.4
Q ss_pred CCEEEEECCCc-hH-HHHHHHHccCCE-EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechh
Q 024096 35 GQEVLDIGCGW-GT-LAIEIVKQTGCK-YTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMI 111 (272)
Q Consensus 35 ~~~vLDiG~G~-G~-~~~~l~~~~~~~-v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~ 111 (272)
+.+|.=||+|. |. ++..+++. +.+ |+.+|.+++..+...+.. + +.. ..|..+.. ...|+|+..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~~~~~~~~~~~---g----~~~-~~~~~~~~--~~~Dvvi~a--- 75 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTEESARELAQKV---E----AEY-TTDLAEVN--PYAKLYIVS--- 75 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSHHHHHHHHHHT---T----CEE-ESCGGGSC--SCCSEEEEC---
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHc---C----Cce-eCCHHHHh--cCCCEEEEe---
Confidence 45799999984 32 33444443 566 899999988776554431 2 232 23433322 457999875
Q ss_pred hccChhhHHHHHHHHHhcCccCcEEE
Q 024096 112 EHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
+++.....+++.+...+++|..++
T Consensus 76 --v~~~~~~~v~~~l~~~~~~~~ivv 99 (266)
T 3d1l_A 76 --LKDSAFAELLQGIVEGKREEALMV 99 (266)
T ss_dssp --CCHHHHHHHHHHHHTTCCTTCEEE
T ss_pred --cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 343444677788887787775544
No 471
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=81.42 E-value=8.8 Score=30.38 Aligned_cols=73 Identities=23% Similarity=0.267 Sum_probs=50.1
Q ss_pred CCCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-------CCCCc
Q 024096 33 SKGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-------KANKY 102 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-------~~~~f 102 (272)
.++.+||=.|++.|. ++..|+++ |.+|+.++.++...+...+.+ ..++.+..+|+.+.. .....
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 467889988876552 34444554 889999999987766655443 247889999987643 22478
Q ss_pred cEEEEechh
Q 024096 103 DRIISCGMI 111 (272)
Q Consensus 103 D~V~~~~~~ 111 (272)
|+++.+..+
T Consensus 86 d~li~~Ag~ 94 (249)
T 3f9i_A 86 DILVCNAGI 94 (249)
T ss_dssp SEEEECCC-
T ss_pred CEEEECCCC
Confidence 999887654
No 472
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.29 E-value=9.5 Score=30.44 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=54.2
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEcccCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQ-DHIRFYLCDYRQLP-----------K 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~~-----------~ 98 (272)
.+.++|=.|++.|. ++..|+++ |++|+.++.++...+...+.+...... .++.++.+|+.+.. .
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 46788888887653 44555554 889999999998877776666554221 46889999988754 0
Q ss_pred CCCccEEEEechh
Q 024096 99 ANKYDRIISCGMI 111 (272)
Q Consensus 99 ~~~fD~V~~~~~~ 111 (272)
-++.|+++.+..+
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1478999887654
No 473
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=81.09 E-value=7.5 Score=31.48 Aligned_cols=75 Identities=16% Similarity=0.167 Sum_probs=53.1
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.+.++|=.|++.|. ++..|++. |++|+.++.++...+...+.+...+ .++.++.+|+.+.. .-
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVA-GAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35678888876553 34445554 8999999999988877777776654 46888999987753 01
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+..|+++.+..+
T Consensus 80 g~iD~lVnnAG~ 91 (264)
T 3tfo_A 80 GRIDVLVNNAGV 91 (264)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999887543
No 474
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=81.08 E-value=22 Score=33.61 Aligned_cols=152 Identities=15% Similarity=0.157 Sum_probs=86.5
Q ss_pred CEEEEECCCchHHH--HHHHHccCCEEEEEcCCHHHHHHHHHHHHHc-----------C---CCCCeEEEEcccCCCCCC
Q 024096 36 QEVLDIGCGWGTLA--IEIVKQTGCKYTGITLSEEQLKYAEIKVREA-----------G---LQDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 36 ~~vLDiG~G~G~~~--~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~-----------g---~~~~i~~~~~d~~~~~~~ 99 (272)
.+|-=||+|+-+.. ..++. .|..|+.+|++++.++.+++.+... . ...++. ...|...+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~-aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFAR-VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR-FSSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEE-EESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHh-CCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhc-ccCcHHHH---
Confidence 69999999976544 44444 5899999999999998887765432 0 001111 22223222
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEEEeecCCCCc-cccccCcchhhhhccc-CCCCCC--------
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVLQFISAPDQC-YDEYRLSPGFIKEYIF-PGGCLP-------- 169 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-~~~~~~~~~~~~~~~~-p~~~~~-------- 169 (272)
...|+|+= .+++.+ +-..++++++..+++|+..|.-.+.+.+-.. .....+...++..++| |-..++
T Consensus 392 ~~aDlVIE-AV~E~l--~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~ 468 (742)
T 3zwc_A 392 STVDLVVE-AVFEDM--NLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSR 468 (742)
T ss_dssp GSCSEEEE-CCCSCH--HHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECS
T ss_pred hhCCEEEE-eccccH--HHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCC
Confidence 34677663 455655 4557899999999999987765444433221 1111233445555444 333222
Q ss_pred --CH---HHHHHHhhcCCCcEEEEEEecCccH
Q 024096 170 --SL---GRVTSAMTSSSGLCVEHLENIGIHY 196 (272)
Q Consensus 170 --~~---~~~~~~l~~~~Gf~v~~~~~~~~~~ 196 (272)
+. +... .+.++-|-..+.+.+....+
T Consensus 469 ~Ts~e~~~~~~-~~~~~lgK~pV~vkd~pGFi 499 (742)
T 3zwc_A 469 YSSPTTIATVM-SLSKKIGKIGVVVGNCYGFV 499 (742)
T ss_dssp SCCHHHHHHHH-HHHHHTTCEEEECCCSTTTT
T ss_pred CCCHHHHHHHH-HHHHHhCCCCcccCCCCCcc
Confidence 11 2222 34445676666666654433
No 475
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=81.08 E-value=24 Score=31.23 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=58.0
Q ss_pred CEEEEECCCchH--HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH-------cC-C------CCCeEEEEcccCCCCCC
Q 024096 36 QEVLDIGCGWGT--LAIEIVKQTGCKYTGITLSEEQLKYAEIKVRE-------AG-L------QDHIRFYLCDYRQLPKA 99 (272)
Q Consensus 36 ~~vLDiG~G~G~--~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~-------~g-~------~~~i~~~~~d~~~~~~~ 99 (272)
.+|.=||+|.-+ ++..+++ .|.+|+++|.+++.++.+++.+.. .| + .....+ ..|...+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~--- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFAR-VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG---
T ss_pred CEEEEECcCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH---
Confidence 579999999633 4444555 478999999999988877664321 11 0 011222 3444222
Q ss_pred CCccEEEEechhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 100 NKYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 100 ~~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
...|+|+..-. +.. +....+++++...++|+..++-
T Consensus 113 ~~aDlVIeaVp-e~~--~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 STVDLVVEAVF-EDM--NLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TTCSEEEECCC-SCH--HHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEEcCC-CCH--HHHHHHHHHHHhhCCCCeEEEe
Confidence 45798887432 111 2236788888888888866543
No 476
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=80.96 E-value=11 Score=30.36 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=53.6
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.+.++|=.|++.|. ++..++++ |++|+.++.++...+...+.+....-..++.++.+|+.+.. .-
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEA-GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 46788988887653 44555554 88999999998887777666655221235899999987753 01
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
++.|+++.+..+
T Consensus 86 g~id~lvnnAg~ 97 (265)
T 3lf2_A 86 GCASILVNNAGQ 97 (265)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999887654
No 477
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=80.66 E-value=9.6 Score=31.22 Aligned_cols=77 Identities=16% Similarity=0.099 Sum_probs=53.3
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCC---EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC----------
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGC---KYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP---------- 97 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~---------- 97 (272)
.+.++|=.|++.|. ++..+++. ++ +|+.++.++...+...+.+.......++.++.+|+.+..
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~-G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEA-SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCCChHHHHHHHHHHHc-CCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46789999876553 33444444 44 999999998888777766655432347899999987754
Q ss_pred -CCCCccEEEEechh
Q 024096 98 -KANKYDRIISCGMI 111 (272)
Q Consensus 98 -~~~~fD~V~~~~~~ 111 (272)
.-+..|+++.+..+
T Consensus 111 ~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 111 QEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGCSCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 11478999987654
No 478
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=80.61 E-value=13 Score=30.10 Aligned_cols=75 Identities=17% Similarity=0.120 Sum_probs=45.2
Q ss_pred CCCEEEEECCCc-hHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------C
Q 024096 34 KGQEVLDIGCGW-GTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------K 98 (272)
Q Consensus 34 ~~~~vLDiG~G~-G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~ 98 (272)
.+.++|=.|++. |+++..+++. .|++|+.++.++...+...+.....+ ++.++.+|+.+.. .
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG---SDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899888752 4444443332 48899999987742222222222222 3678889987643 0
Q ss_pred CCCccEEEEechh
Q 024096 99 ANKYDRIISCGMI 111 (272)
Q Consensus 99 ~~~fD~V~~~~~~ 111 (272)
-+..|+++.+..+
T Consensus 97 ~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 97 WGSLDIIVHSIAY 109 (285)
T ss_dssp TSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1478999887654
No 479
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=80.57 E-value=19 Score=29.84 Aligned_cols=96 Identities=14% Similarity=0.077 Sum_probs=56.2
Q ss_pred CCCEEEEECCCchH--HHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEec-
Q 024096 34 KGQEVLDIGCGWGT--LAIEIVKQ-TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCG- 109 (272)
Q Consensus 34 ~~~~vLDiG~G~G~--~~~~l~~~-~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~- 109 (272)
+..+|.=+|+|..+ ++..++.. ...++..+|++++....+.+.... .. .++... .|...+ ...|+|+...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~-~~-~~i~~t-~d~~~l---~~aD~Vi~aag 86 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIF-NL-PNVEIS-KDLSAS---AHSKVVIFTVN 86 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHH-TC-TTEEEE-SCGGGG---TTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhh-cC-CCeEEe-CCHHHH---CCCCEEEEcCC
Confidence 34689999999633 55555554 334899999998644455544432 22 256553 555333 4679998864
Q ss_pred -----------hhhccChhhHHHHHHHHHhcCccCcEEEE
Q 024096 110 -----------MIEHVGHDYMEEFFGCCESLLATHGLLVL 138 (272)
Q Consensus 110 -----------~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 138 (272)
....+ +-..++++++.+.- |++.+++
T Consensus 87 ~~~pG~tR~dl~~~n~--~i~~~i~~~i~~~~-p~a~iiv 123 (303)
T 2i6t_A 87 SLGSSQSYLDVVQSNV--DMFRALVPALGHYS-QHSVLLV 123 (303)
T ss_dssp C----CCHHHHHHHHH--HHHHHHHHHHHHHT-TTCEEEE
T ss_pred CCCCCCCHHHHHHHHH--HHHHHHHHHHHHhC-CCeEEEE
Confidence 22333 23456777777764 9999876
No 480
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=80.54 E-value=8.2 Score=30.97 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=54.5
Q ss_pred CCCEEEEECC-CchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------
Q 024096 34 KGQEVLDIGC-GWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 34 ~~~~vLDiG~-G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~----------- 98 (272)
.+.++|=.|+ |.|. ++..++++ +.+|+.++.++...+...+.+...+ ..++.++.+|+.+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4678998887 5442 45556665 8999999999888777776665443 2479999999987540
Q ss_pred CCCccEEEEechh
Q 024096 99 ANKYDRIISCGMI 111 (272)
Q Consensus 99 ~~~fD~V~~~~~~ 111 (272)
-++.|+++.+..+
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 1378999887654
No 481
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=80.43 E-value=11 Score=29.80 Aligned_cols=75 Identities=15% Similarity=0.214 Sum_probs=50.6
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
.+.+||=.|++.|. ++..|++ .+.+|++++.++...+...+.++..+ .++.++.+|+.+... .
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAE-AGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46789988875442 3334444 38899999999877666555555443 468999999877540 1
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+..|+|+.+..+
T Consensus 89 ~~id~vi~~Ag~ 100 (260)
T 3awd_A 89 GRVDILVACAGI 100 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999887543
No 482
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=80.43 E-value=4.9 Score=35.38 Aligned_cols=96 Identities=9% Similarity=0.062 Sum_probs=54.9
Q ss_pred HHHHHHHcCC-CCCCEEEEECCCc-hHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCC
Q 024096 23 VSVLIEKARV-SKGQEVLDIGCGW-GTLAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKAN 100 (272)
Q Consensus 23 ~~~l~~~l~~-~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 100 (272)
++.+.+..+. -.|.+|.=+|.|. |.....+++..|++|+++|+++.....+.. .| ..+ .++.+.- .
T Consensus 198 ldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~----~G----~~~--~sL~eal--~ 265 (436)
T 3h9u_A 198 VDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM----EG----YQV--LLVEDVV--E 265 (436)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHHHHT--T
T ss_pred HHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH----hC----Cee--cCHHHHH--h
Confidence 3444444443 3688999999885 333333344478999999999865544432 22 222 2333322 4
Q ss_pred CccEEEEechhhccChhhHHHHHHHHHhcCccCcEEE
Q 024096 101 KYDRIISCGMIEHVGHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 101 ~fD~V~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
..|+|+....-.++-. ++....||||..++
T Consensus 266 ~ADVVilt~gt~~iI~-------~e~l~~MK~gAIVI 295 (436)
T 3h9u_A 266 EAHIFVTTTGNDDIIT-------SEHFPRMRDDAIVC 295 (436)
T ss_dssp TCSEEEECSSCSCSBC-------TTTGGGCCTTEEEE
T ss_pred hCCEEEECCCCcCccC-------HHHHhhcCCCcEEE
Confidence 5798887443333311 13456678887665
No 483
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=80.26 E-value=11 Score=30.29 Aligned_cols=75 Identities=15% Similarity=0.230 Sum_probs=51.7
Q ss_pred CCCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.+.+||=.|++.| ++..+++. .|.+|++++.++...+...+.+...+ .++.++.+|+.+.. .-
T Consensus 30 ~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGAGHG-IGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 5678998887544 44444332 48899999999877766666665544 47899999987643 01
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+.+|+|+.+..+
T Consensus 107 g~iD~li~~Ag~ 118 (272)
T 1yb1_A 107 GDVSILVNNAGV 118 (272)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 368999887654
No 484
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=80.25 E-value=8.9 Score=31.01 Aligned_cols=104 Identities=16% Similarity=0.139 Sum_probs=59.0
Q ss_pred CCCEEEEECCC-chHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------C
Q 024096 34 KGQEVLDIGCG-WGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------K 98 (272)
Q Consensus 34 ~~~~vLDiG~G-~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~ 98 (272)
.+.++|=.|++ +|+++..+++. .|++|+.++.++...+...+.....+ ++.++.+|+.+.. .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999875 24444444433 48899999887652222222222222 4688899987643 0
Q ss_pred CCCccEEEEechhh----------ccChhhHHH-----------HHHHHHhcCccCcEEEEEe
Q 024096 99 ANKYDRIISCGMIE----------HVGHDYMEE-----------FFGCCESLLATHGLLVLQF 140 (272)
Q Consensus 99 ~~~fD~V~~~~~~~----------~~~~~~~~~-----------~l~~~~~~LkpgG~l~i~~ 140 (272)
-++.|+++.+..+. ..+.+++.. +.+.+...|+++|+++...
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 13789998876433 222222222 3344556666678877643
No 485
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=80.07 E-value=6.7 Score=31.92 Aligned_cols=83 Identities=14% Similarity=-0.058 Sum_probs=49.3
Q ss_pred EEEEECCCc-hH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhhcc
Q 024096 37 EVLDIGCGW-GT-LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIEHV 114 (272)
Q Consensus 37 ~vLDiG~G~-G~-~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~~~ 114 (272)
+|.=||+|. |. ++..++ . +.+|+.+|.++...+...+. |. ... +..+. -...|+|+..-.-.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-~-g~~V~~~~~~~~~~~~~~~~----g~----~~~--~~~~~--~~~~D~vi~~v~~~-- 66 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-R-RFPTLVWNRTFEKALRHQEE----FG----SEA--VPLER--VAEARVIFTCLPTT-- 66 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-T-TSCEEEECSSTHHHHHHHHH----HC----CEE--CCGGG--GGGCSEEEECCSSH--
T ss_pred eEEEEcccHHHHHHHHHHh-C-CCeEEEEeCCHHHHHHHHHC----CC----ccc--CHHHH--HhCCCEEEEeCCCh--
Confidence 577889985 43 333444 3 77899999998776655443 22 111 11111 13579998753211
Q ss_pred ChhhHHHHHHHHHhcCccCcEEE
Q 024096 115 GHDYMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 115 ~~~~~~~~l~~~~~~LkpgG~l~ 137 (272)
.....+++.+...+++|..++
T Consensus 67 --~~~~~v~~~l~~~l~~~~~vv 87 (289)
T 2cvz_A 67 --REVYEVAEALYPYLREGTYWV 87 (289)
T ss_dssp --HHHHHHHHHHTTTCCTTEEEE
T ss_pred --HHHHHHHHHHHhhCCCCCEEE
Confidence 124567777878888876554
No 486
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=79.94 E-value=6.9 Score=31.31 Aligned_cols=72 Identities=18% Similarity=0.182 Sum_probs=47.0
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
.++++|=.|++.|. ++..|+++ |.+|+.++.++...+...+.+ ..++.++.+|+.+... -
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788888876542 34444554 889999999876554433222 2468889999876430 1
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+..|+++.+..+
T Consensus 78 g~iD~lv~nAg~ 89 (254)
T 1hdc_A 78 GSVDGLVNNAGI 89 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999887543
No 487
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=79.86 E-value=11 Score=31.07 Aligned_cols=87 Identities=14% Similarity=0.097 Sum_probs=53.3
Q ss_pred CCEEEEECCCchH--HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCCCCCccEEEEechhh
Q 024096 35 GQEVLDIGCGWGT--LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPKANKYDRIISCGMIE 112 (272)
Q Consensus 35 ~~~vLDiG~G~G~--~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~fD~V~~~~~~~ 112 (272)
..+|.=||+|.=+ ++..+++ .+.+|+++|.+++..+.+.+. |. .....+..+.. ...|+|+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~~~~~~~~~~----g~----~~~~~~~~e~~--~~aDvvi~~---- 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR-AGLSTWGADLNPQACANLLAE----GA----CGAAASAREFA--GVVDALVIL---- 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHT----TC----SEEESSSTTTT--TTCSEEEEC----
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCeEEEEECCHHHHHHHHHc----CC----ccccCCHHHHH--hcCCEEEEE----
Confidence 3689999998433 3444555 478999999999877665542 32 11233433332 457999875
Q ss_pred ccCh-hhHHHHH---HHHHhcCccCcEEE
Q 024096 113 HVGH-DYMEEFF---GCCESLLATHGLLV 137 (272)
Q Consensus 113 ~~~~-~~~~~~l---~~~~~~LkpgG~l~ 137 (272)
+++ .....++ +.+...++||..++
T Consensus 72 -vp~~~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 72 -VVNAAQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp -CSSHHHHHHHHC--CCCGGGSCTTCEEE
T ss_pred -CCCHHHHHHHHhChhhHHhhCCCCCEEE
Confidence 332 2334555 66667788876654
No 488
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=79.81 E-value=13 Score=29.92 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=51.5
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
.+.++|=.|++.|. ++..|+++ |.+|+.++.++...+...+.+.......++.++.+|+.+... -
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789988876552 34445554 889999999987776665555443112468899999877540 1
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+..|+++.+..+
T Consensus 91 g~id~lv~nAg~ 102 (267)
T 1iy8_A 91 GRIDGFFNNAGI 102 (267)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368999887543
No 489
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=79.80 E-value=5.8 Score=31.82 Aligned_cols=74 Identities=22% Similarity=0.261 Sum_probs=51.8
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.+.++|=.|++.|. ++..|+++ |++|+.++.++...+.+.+.+...+ .++.++.+|+.+.. .-
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46688888876552 34445554 8899999999988777766654433 47899999987753 01
Q ss_pred CCccEEEEech
Q 024096 100 NKYDRIISCGM 110 (272)
Q Consensus 100 ~~fD~V~~~~~ 110 (272)
+..|+++.+..
T Consensus 82 g~id~lv~nAg 92 (257)
T 3imf_A 82 GRIDILINNAA 92 (257)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37899988754
No 490
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=79.70 E-value=13 Score=29.47 Aligned_cols=75 Identities=17% Similarity=0.179 Sum_probs=51.7
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
.+.++|=.|++.|. ++..|+++ |.+|+.++.++...+...+.+...+ .++.++.+|+.+... -
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAE-GAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888876552 34444554 8899999999877776666655543 368899999877530 1
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+..|+++.+..+
T Consensus 83 g~id~lv~nAg~ 94 (247)
T 2jah_A 83 GGLDILVNNAGI 94 (247)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999886543
No 491
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=79.23 E-value=19 Score=29.72 Aligned_cols=78 Identities=18% Similarity=0.150 Sum_probs=49.7
Q ss_pred CCCCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEE-EcccCCCC----CCCCccE
Q 024096 33 SKGQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFY-LCDYRQLP----KANKYDR 104 (272)
Q Consensus 33 ~~~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~-~~d~~~~~----~~~~fD~ 104 (272)
.++++||=.|+ +|.++..+++. .+.+|++++.++...+.....+.... ..+++++ .+|+.+.. .-..+|+
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCE
Confidence 45779998886 45554444433 47899999998776554444333211 1368888 79987654 1236899
Q ss_pred EEEechhh
Q 024096 105 IISCGMIE 112 (272)
Q Consensus 105 V~~~~~~~ 112 (272)
|+......
T Consensus 87 vih~A~~~ 94 (342)
T 1y1p_A 87 VAHIASVV 94 (342)
T ss_dssp EEECCCCC
T ss_pred EEEeCCCC
Confidence 98876543
No 492
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=79.22 E-value=9.5 Score=31.15 Aligned_cols=75 Identities=16% Similarity=0.178 Sum_probs=53.0
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.+.++|=.|++.|. ++..|++. |++|+.++.++...+...+.+...+ .++.++.+|+.+.. .-
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAAD-GVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56788988876653 44445554 8899999999887776666654433 47899999987753 01
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
++.|+++.+..+
T Consensus 104 g~iD~lVnnAg~ 115 (283)
T 3v8b_A 104 GHLDIVVANAGI 115 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999887654
No 493
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=79.18 E-value=13 Score=30.57 Aligned_cols=75 Identities=19% Similarity=0.318 Sum_probs=52.3
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCC------------HHHHHHHHHHHHHcCCCCCeEEEEcccCCCCC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLS------------EEQLKYAEIKVREAGLQDHIRFYLCDYRQLPK 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s------------~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~ 98 (272)
.+.++|=.|++.|. ++..|++. |++|+.+|.+ +...+...+.+...+ .++.++.+|+.+...
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLARE-GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDA 103 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHH
Confidence 46789988887663 44555554 8999999986 666666555555544 478999999987540
Q ss_pred -----------CCCccEEEEechh
Q 024096 99 -----------ANKYDRIISCGMI 111 (272)
Q Consensus 99 -----------~~~fD~V~~~~~~ 111 (272)
-+..|+++.+..+
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 1478999887543
No 494
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=79.01 E-value=8.7 Score=30.33 Aligned_cols=73 Identities=14% Similarity=0.137 Sum_probs=46.9
Q ss_pred CCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHH-HHcCCCCCeEEEEcccCCCCC-----------C
Q 024096 35 GQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKV-REAGLQDHIRFYLCDYRQLPK-----------A 99 (272)
Q Consensus 35 ~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~-~~~g~~~~i~~~~~d~~~~~~-----------~ 99 (272)
+.++|=.|++ |.++..+++. .+.+|+.++.++...+...+.+ ... ..++.++.+|+.+... -
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY--ADKVLRVRADVADEGDVNAAIAATMEQF 78 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT--GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4578888865 4444444332 4789999999887665554443 221 2468999999877540 1
Q ss_pred CCccEEEEech
Q 024096 100 NKYDRIISCGM 110 (272)
Q Consensus 100 ~~fD~V~~~~~ 110 (272)
+..|+|+.+..
T Consensus 79 ~~id~li~~Ag 89 (250)
T 2cfc_A 79 GAIDVLVNNAG 89 (250)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36899988754
No 495
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=78.98 E-value=12 Score=30.39 Aligned_cols=77 Identities=18% Similarity=0.252 Sum_probs=53.9
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEcccCCCCC-----------
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQ-DHIRFYLCDYRQLPK----------- 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~~~----------- 98 (272)
.+.++|=.|++.|. ++..|+++ |++|+.++.++...+...+.++..+.. .++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAA-GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46789988876553 44455554 889999999998877777766654421 268899999877540
Q ss_pred CCCccEEEEechh
Q 024096 99 ANKYDRIISCGMI 111 (272)
Q Consensus 99 ~~~fD~V~~~~~~ 111 (272)
-++.|+++.+...
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1368999887654
No 496
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=78.88 E-value=13 Score=30.04 Aligned_cols=75 Identities=24% Similarity=0.271 Sum_probs=51.5
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-----------CC
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQLP-----------KA 99 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~-----------~~ 99 (272)
.+.++|=.|++.|. ++..|++ .|.+|+.++.++...+...+.++..+ .++.++.+|+.+.. .-
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46789988876552 3344444 48899999999877766655555544 36889999987643 01
Q ss_pred CCccEEEEechh
Q 024096 100 NKYDRIISCGMI 111 (272)
Q Consensus 100 ~~fD~V~~~~~~ 111 (272)
+..|+++.+..+
T Consensus 98 g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 98 GPVDVLVNNAGR 109 (277)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999887543
No 497
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=78.71 E-value=8.5 Score=30.14 Aligned_cols=70 Identities=16% Similarity=0.190 Sum_probs=45.3
Q ss_pred CCCEEEEECCCchHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCe-EEEEcccCC-CC-CCCCccEEEE
Q 024096 34 KGQEVLDIGCGWGTLAIEIVKQ---TGCKYTGITLSEEQLKYAEIKVREAGLQDHI-RFYLCDYRQ-LP-KANKYDRIIS 107 (272)
Q Consensus 34 ~~~~vLDiG~G~G~~~~~l~~~---~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i-~~~~~d~~~-~~-~~~~fD~V~~ 107 (272)
.+++||=.|+ +|.++..+++. .+.+|++++.++...+.... .++ +++.+|+.+ +. .-...|+|+.
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 5789998886 44444444433 47899999988765443322 257 899999862 22 2257899998
Q ss_pred echhh
Q 024096 108 CGMIE 112 (272)
Q Consensus 108 ~~~~~ 112 (272)
+....
T Consensus 91 ~ag~~ 95 (236)
T 3e8x_A 91 AAGSG 95 (236)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 76543
No 498
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=78.68 E-value=14 Score=30.17 Aligned_cols=93 Identities=18% Similarity=0.249 Sum_probs=57.5
Q ss_pred CEEEEECCCchH--HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc---------CCC--------CCeEEEEcccCCC
Q 024096 36 QEVLDIGCGWGT--LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREA---------GLQ--------DHIRFYLCDYRQL 96 (272)
Q Consensus 36 ~~vLDiG~G~G~--~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~---------g~~--------~~i~~~~~d~~~~ 96 (272)
.+|.=||+|.=+ ++..+++ .|.+|+.+|.+++.++.+.+.+... ++. .++.+ ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~-~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF-HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 578889998533 3444455 4889999999999888877664221 110 01222 2233221
Q ss_pred CCCCCccEEEEechhhccChh--hHHHHHHHHHhcCccCcEEE
Q 024096 97 PKANKYDRIISCGMIEHVGHD--YMEEFFGCCESLLATHGLLV 137 (272)
Q Consensus 97 ~~~~~fD~V~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~ 137 (272)
-...|+|+.. ++.. ....+++++...++|+..++
T Consensus 83 --~~~aDlVi~a-----v~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 --VKDADLVIEA-----VPESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp --TTTCSEEEEC-----CCSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred --hccCCEEEEe-----ccCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 1457988864 3322 44678889999998887654
No 499
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=78.62 E-value=13 Score=30.01 Aligned_cols=76 Identities=20% Similarity=0.292 Sum_probs=52.5
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCC------------HHHHHHHHHHHHHcCCCCCeEEEEcccCCCC-
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLS------------EEQLKYAEIKVREAGLQDHIRFYLCDYRQLP- 97 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s------------~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 97 (272)
.+.++|=.|++.|. ++..|+++ |++|+.++.+ ++..+...+.+...+ .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAAD-GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 46789988876553 44555554 8999999976 666665555555544 47999999998754
Q ss_pred -C---------CCCccEEEEechhh
Q 024096 98 -K---------ANKYDRIISCGMIE 112 (272)
Q Consensus 98 -~---------~~~fD~V~~~~~~~ 112 (272)
. -++.|+++.+..+.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 0 13789999876554
No 500
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=78.48 E-value=10 Score=30.95 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=53.6
Q ss_pred CCCEEEEECCCchH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccCCC-C-----------C
Q 024096 34 KGQEVLDIGCGWGT---LAIEIVKQTGCKYTGITLSEEQLKYAEIKVREAGLQDHIRFYLCDYRQL-P-----------K 98 (272)
Q Consensus 34 ~~~~vLDiG~G~G~---~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-~-----------~ 98 (272)
.+.+||=.|++.|. ++..|++ .|++|+.++.++...+.+.+.+...+- .++.++.+|+.+. . .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSS-NGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 46788888876552 3444454 488999999998877776666655432 4799999999886 2 0
Q ss_pred CCCccEEEEechhh
Q 024096 99 ANKYDRIISCGMIE 112 (272)
Q Consensus 99 ~~~fD~V~~~~~~~ 112 (272)
.+..|+++.+..+.
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 14789998876543
Done!