BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024098
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5N2B2|HEMH_SYNP6 Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=hemH PE=3 SV=1
Length = 387
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 188 AEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDF 245
+++V QP DV + ++V++ E E +G + +E+ NG+ A +GFL LL
Sbjct: 315 SDLVEQTLEQPRFRLEDVTLLPKKVKLYPQERWE-WGITLNAEVWNGRIAMLGFLALL-V 372
Query: 246 ELLTGKGLLKGTGFL 260
ELLTG+G L G L
Sbjct: 373 ELLTGRGPLHALGLL 387
>sp|Q31S00|HEMH_SYNE7 Ferrochelatase OS=Synechococcus elongatus (strain PCC 7942) GN=hemH
PE=3 SV=1
Length = 387
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 188 AEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDF 245
+++V QP DV + ++V++ E E +G + +E+ NG+ A +GFL LL
Sbjct: 315 SDLVEQTLEQPRFRLEDVTLLPKKVKLYPQERWE-WGITLNAEVWNGRIAMLGFLALL-V 372
Query: 246 ELLTGKGLLKGTGFL 260
ELLTG+G L G L
Sbjct: 373 ELLTGRGPLHALGLL 387
>sp|P51355|YCF17_PORPU Uncharacterized protein ycf17 OS=Porphyra purpurea GN=ycf17 PE=3
SV=1
Length = 48
Score = 40.0 bits (92), Expect = 0.018, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 261
+GF ++E NG+ A IGF+ ++ EL+TGKGLL +G ++
Sbjct: 8 WGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLLYLSGLMN 48
>sp|B1XL79|HEMH_SYNP2 Ferrochelatase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=hemH PE=3 SV=1
Length = 386
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+G N ++E++NG+ A IGFL LL EL++G+G L G +
Sbjct: 348 WGMNTSAEVLNGRLAMIGFLALL-LELISGQGPLHFVGIM 386
>sp|B2J9P0|HEMH_NOSP7 Ferrochelatase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=hemH PE=3 SV=1
Length = 388
Score = 37.7 bits (86), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 185 DASAEIVFSGKAQPGVTATDV--NIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 242
+A AE+V P + + V+M E E +G ++E+ NG+ A +GF+ L
Sbjct: 312 NALAELVIDALKNPSFKLSQAAQMKKMVKMYPQERWE-WGLTTSAEVWNGRIAMLGFIAL 370
Query: 243 LDFELLTGKGLLKGTGFLD 261
+ EL+TG G L G L
Sbjct: 371 I-IELITGHGFLHMIGLLQ 388
>sp|Q10WR6|HEMH_TRIEI Ferrochelatase OS=Trichodesmium erythraeum (strain IMS101) GN=hemH
PE=3 SV=1
Length = 387
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 188 AEIVFSGKAQPGVTATD-VNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFE 246
A++V P +D + ++++ + ++ +G T+E+ NG+ A +GF+ LL E
Sbjct: 315 ADLVMEALDAPSRDFSDAIQMKKIIKMYPQERWQWGLTTTAEVWNGRLAMVGFMALL-LE 373
Query: 247 LLTGKGLLKGTGFL 260
L+TG G L G L
Sbjct: 374 LITGYGPLHFAGLL 387
>sp|Q8YQR8|HEMH_NOSS1 Ferrochelatase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=hemH
PE=3 SV=1
Length = 388
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 210 VRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 261
V+M E E +G ++E+ NG+ A +GF+ L+ EL+TG+GLL G L
Sbjct: 339 VKMYPPESWE-WGMTSSAEVWNGRIAMLGFIALI-IELVTGQGLLHMIGLLQ 388
>sp|Q3MCT9|HEMH_ANAVT Ferrochelatase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=hemH PE=3 SV=1
Length = 388
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 210 VRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 261
V+M E E +G ++E+ NG+ A +GF+ L+ EL+TG+GLL G L
Sbjct: 339 VKMYPPESWE-WGMTSSAEVWNGRIAMLGFIALI-IELVTGQGLLHMIGLLQ 388
>sp|Q84BZ1|ANDAB_BURCE Anthranilate 1,2-dioxygenase ferredoxin subunit OS=Burkholderia
cepacia GN=andAb PE=1 SV=1
Length = 108
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
W P+ + + E + + I + DE+FA+ + S SEG + +
Sbjct: 8 EWHPLGAIDEFTEDEPAARVAGQKPIAVFRIGDELFAMHDLCSHGHARLSEGYV-----E 62
Query: 149 DGCIVCPTTESTFDLRTGA 167
DGC+ CP + D+RTGA
Sbjct: 63 DGCVECPLHQGLIDIRTGA 81
>sp|Q8DGU6|HEMH_THEEB Ferrochelatase OS=Thermosynechococcus elongatus (strain BP-1)
GN=hemH PE=3 SV=2
Length = 388
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 186 ASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLL 243
A A++V A P T +VN + V++ E E +G +E NG+ A +GFL L+
Sbjct: 314 ALAQLVKEALAAPPRTFAEVNQSRKRVKLYPQERWE-WGMTSAAERWNGRLAMLGFLALM 372
Query: 244 DFELLTGKGLLKGTGFL 260
EL++G+G L G L
Sbjct: 373 -IELISGQGPLHMLGLL 388
>sp|Q31C09|HEMH_PROM9 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemH
PE=3 SV=1
Length = 391
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 188 AEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDF 245
+++V S +P V + + E+V++ E + +G+N +SE+ NG+ A I FL+L
Sbjct: 319 SDLVISCLEEPQVNIEEASKLPEKVKLYPQEKWQ-WGWNNSSEVWNGRVAMIVFLVLF-I 376
Query: 246 ELLTGKGLLKGTGFL 260
EL+ G G L G L
Sbjct: 377 ELIAGSGPLHRLGIL 391
>sp|P48439|OST3_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase
subunit 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=OST3 PE=1 SV=1
Length = 350
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 132 PAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVMEGGASSDASAEIV 191
P E AY L A + GC +C ES +D V W+ ++P SS++ I
Sbjct: 54 PHENAYIVALFTATAPEIGCSLCLELESEYD---TIVASWFDDHP---DAKSSNSDTSIF 107
Query: 192 FSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFN 224
F T VN+E+ + + + F N
Sbjct: 108 F----------TKVNLEDPSKTIPKAFQFFQLN 130
>sp|A2BVI7|HEMH_PROM5 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemH
PE=3 SV=1
Length = 391
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 208 EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
E+V++ E + +G+N +SE+ NG+ A I FL+L EL++G G L G L
Sbjct: 341 EKVKLYPQEKWQ-WGWNNSSEVWNGRVAMIVFLILF-IELISGSGPLHKLGIL 391
>sp|Q7V2F5|HEMH_PROMP Ferrochelatase OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=hemH PE=3 SV=1
Length = 391
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 208 EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
E+V++ E + +G+N +SE+ NG+ A I FL+L EL++G G L G L
Sbjct: 341 EKVKLYPQEKWQ-WGWNNSSEVWNGRVAMIVFLILF-IELISGSGPLHKLGIL 391
>sp|B7K399|HEMH_CYAP8 Ferrochelatase OS=Cyanothece sp. (strain PCC 8801) GN=hemH PE=3
SV=1
Length = 387
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 185 DASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 242
D+ A++V +P T V E ++M E + +G +E+ NG+ A +GF+ L
Sbjct: 312 DSLAQLVTKSLQEPPCTFNQVIHPKENMKMYPQERWQ-WGLTTAAEVWNGRLAMVGFIAL 370
Query: 243 LDFELLTGKGLLKGTGFL 260
L EL++G G L G L
Sbjct: 371 L-IELISGHGPLHFVGLL 387
>sp|A3PBP9|HEMH_PROM0 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemH
PE=3 SV=1
Length = 391
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 205 VNIEE-------VRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGT 257
VNIEE V++ E + +G+N +SE+ NG+ A I FL+L EL++G G L
Sbjct: 331 VNIEEASQLPEKVKLYPQEKWQ-WGWNNSSEVWNGRVAMIIFLVLF-IELISGSGPLHKL 388
Query: 258 GFL 260
G L
Sbjct: 389 GIL 391
>sp|A8G3P0|HEMH_PROM2 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemH
PE=3 SV=1
Length = 391
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 208 EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
E+V++ E + +G+N +SE+ NG+ A I FL+L EL++G G L G L
Sbjct: 341 EKVKLYPQEKWQ-WGWNNSSEVWNGRVAMIIFLVLF-IELISGSGPLHKLGIL 391
>sp|Q0I8L9|HEMH_SYNS3 Ferrochelatase OS=Synechococcus sp. (strain CC9311) GN=hemH PE=3
SV=1
Length = 391
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 210 VRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
V++ E E +G+N +SE+ NG+ A IGF L EL++G G L G L
Sbjct: 343 VKLYPQEKWE-WGWNNSSEVWNGRLAMIGFSAFL-LELISGHGPLHAVGLL 391
>sp|B7KGB9|HEMH_CYAP7 Ferrochelatase OS=Cyanothece sp. (strain PCC 7424) GN=hemH PE=3
SV=1
Length = 387
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 185 DASAEIVFSGKAQPGVTATDVN--IEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 242
D+ A++V + + T ++ + ++M E E +G +E+ NG+ A IGF+ L
Sbjct: 312 DSLAQLVINSLTENSYTFEEITRPKKNMKMYPQERWE-WGMTTAAEVWNGRLAMIGFIAL 370
Query: 243 LDFELLTGKGLLKGTGFL 260
L EL++G G L G L
Sbjct: 371 L-IELISGHGPLHFVGLL 387
>sp|Q1XDD2|YCF17_PORYE Uncharacterized protein ycf17 OS=Porphyra yezoensis GN=ycf17 PE=3
SV=1
Length = 48
Score = 35.0 bits (79), Expect = 0.50, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+GF ++E NG+ A IGF+ ++ E++TG+GLL G +
Sbjct: 8 WGFTDSAETWNGRFAMIGFISVIFIEVVTGQGLLYLIGMM 47
>sp|A2BQ06|HEMH_PROMS Ferrochelatase OS=Prochlorococcus marinus (strain AS9601) GN=hemH
PE=3 SV=1
Length = 391
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 208 EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
E+V++ E + +G+N +SE+ NG+ A I FL+L EL++G G L G L
Sbjct: 341 EKVKLYPQEKWQ-WGWNNSSEVWNGRVAMIIFLVLF-IELISGSGPLHKLGIL 391
>sp|P54225|HEMH_SYNY3 Ferrochelatase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=hemH PE=3 SV=1
Length = 387
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 185 DASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 242
DA A++V P T V + ++M E E +G +E+ NG+ A +GF+ L
Sbjct: 312 DALAQMVMDSLNDPPCTFETVPHPKKNMKMYPQERWE-WGLTTAAEVWNGRLAMLGFIAL 370
Query: 243 LDFELLTGKGLLKGTGFL 260
L EL++G+G L G L
Sbjct: 371 L-VELISGQGPLHFVGLL 387
>sp|Q3ALP2|HEMH_SYNSC Ferrochelatase OS=Synechococcus sp. (strain CC9605) GN=hemH PE=3
SV=1
Length = 391
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 209 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+V++ E E +G+N +SE+ NG+ A +GF L EL++G+G L G L
Sbjct: 342 KVKLYPQEKWE-WGWNNSSEVWNGRLAMVGFSAFL-LELISGQGPLHALGLL 391
>sp|Q9TM07|YCF17_CYACA Uncharacterized protein ycf17 OS=Cyanidium caldarium GN=ycf17 PE=3
SV=1
Length = 43
Score = 34.7 bits (78), Expect = 0.69, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+GF+ ++ELING+ A + F+L L E +T + +L FL
Sbjct: 4 YGFHQSTELINGRLAMLAFILSLFIEFITEQKILHFLKFL 43
>sp|B0JRN7|HEMH_MICAN Ferrochelatase OS=Microcystis aeruginosa (strain NIES-843) GN=hemH
PE=3 SV=1
Length = 387
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 210 VRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
++M E E +G +E+ NG+ A IGFL ++ EL+TG+G L G L
Sbjct: 339 MKMYPQERWE-WGMTTAAEVWNGRLAMIGFLAII-IELITGQGPLHFVGLL 387
>sp|O78425|YCF17_GUITH Uncharacterized protein ycf17 OS=Guillardia theta GN=ycf17 PE=3
SV=1
Length = 53
Score = 34.7 bits (78), Expect = 0.85, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 254
+GFNV +E NG+ A I FLL++ E +T K +L
Sbjct: 14 WGFNVYAENWNGRLAMISFLLIICVEFITNKNVL 47
>sp|O43063|PSB1_SCHPO Probable proteasome subunit beta type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre3 PE=3 SV=1
Length = 226
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 95 VPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
V ++A+ KGE R+ G TI L YKD V + GAY + KLTQ
Sbjct: 11 VDINAIKKGEIRM----GTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQ 60
>sp|Q7U5G0|HEMH_SYNPX Ferrochelatase OS=Synechococcus sp. (strain WH8102) GN=hemH PE=3
SV=1
Length = 391
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 209 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+V++ E E +G+N +SE+ NG+ A +GF L EL++G G L G L
Sbjct: 342 KVKLYPQEKWE-WGWNNSSEVWNGRLAMLGFSAFL-LELISGHGPLHALGLL 391
>sp|Q7V6C6|HEMH_PROMM Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemH
PE=3 SV=1
Length = 391
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+G N +SE NG+ A +GF L EL++G G L G L
Sbjct: 353 WGLNTSSEAWNGRIAMLGFAAFL-LELISGHGPLHAIGLL 391
>sp|A2C7Q7|HEMH_PROM3 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemH
PE=3 SV=1
Length = 391
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+G N +SE NG+ A +GF L EL++G G L G L
Sbjct: 353 WGLNTSSEAWNGRIAMLGFAAFL-LELISGHGPLHAIGLL 391
>sp|Q51493|NDOA_PSEAI Naphthalene 1,2-dioxygenase system ferredoxin subunit
OS=Pseudomonas aeruginosa GN=ndoA PE=3 SV=3
Length = 104
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
E W+ V L +P+G+ + +G+ + L + E++A +N A S+G + +
Sbjct: 3 EKWIDAVALYEIPEGDVLGVTVEGKELALYEVEGEIYATDNLCTHGAARMSDGFLEGRE- 61
Query: 148 QDGCIVCPTTESTFDLRTG 166
I CP + FD+ TG
Sbjct: 62 ----IECPLHQGRFDVCTG 76
>sp|A5GS98|HEMH_SYNR3 Ferrochelatase OS=Synechococcus sp. (strain RCC307) GN=hemH PE=3
SV=1
Length = 387
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+G+N +SE+ NG+ A +GF L EL++G G L G L
Sbjct: 349 WGWNNSSEVWNGRLAMLGFSAFL-VELISGHGPLHALGLL 387
>sp|O52381|NAGAB_RALSP Naphthalene 1,2-dioxygenase/salicylate 5-hydroxylase systems,
ferredoxin component OS=Ralstonia sp. GN=nagAb PE=1 SV=1
Length = 104
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
+NW+ L +P+G+ + +G+ I L + E++A +N A S+G + +
Sbjct: 3 QNWIDAACLDDIPEGDVVGVKVNGKEIALYEVEGEIYATDNLCTHGAARMSDGFLEGRE- 61
Query: 148 QDGCIVCPTTESTFDLRTG 166
I CP + FD+ TG
Sbjct: 62 ----IECPLHQGRFDVCTG 76
>sp|A5GJF5|HEMH_SYNPW Ferrochelatase OS=Synechococcus sp. (strain WH7803) GN=hemH PE=3
SV=1
Length = 391
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 209 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
+V++ E E +G+N +SE+ NG+ A +GF L EL++G G L G L
Sbjct: 342 KVKLYPQEKWE-WGWNNSSEVWNGRLAMLGFSGFL-LELISGHGPLHALGLL 391
>sp|Q31XV0|HCAC_SHIBS 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
OS=Shigella boydii serotype 4 (strain Sb227) GN=hcaC
PE=3 SV=1
Length = 106
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
N + P++ +P+GE + I I L E +AI +R S + SEG L
Sbjct: 2 NRIYACPVADVPEGEA-LRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGY----LED 56
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVMEGGASSDASAEIVFSGKAQP 198
D + CP ++F L+TG +P+ + S + +AQP
Sbjct: 57 DATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGSDIFIDLPEAQP 106
>sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophora paradoxa GN=ycf17 PE=3
SV=1
Length = 49
Score = 32.0 bits (71), Expect = 4.3, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 212 MVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 260
M + ++ +GF +E NG+ A +GF+ L E LTG+G L G L
Sbjct: 1 MQEERNIWNWGFTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLGIL 49
>sp|P14897|ELI9_HORVU Low molecular mass early light-inducible protein HV90,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 172
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 228 ELINGKAAAIGFLLLLDFELLTGKGLL----KGTGFLDFIYSVA 267
E ING+ A +GF+ L E G GLL GTG F Y+VA
Sbjct: 72 ERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVA 115
>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis
thaliana GN=PSBS PE=1 SV=1
Length = 265
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 220 GFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 254
G GF +EL G+ A IGF L E LTGKG+L
Sbjct: 82 GIGFTKANELFVGRVAMIGFAASLLGEALTGKGIL 116
>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea
GN=PSBS PE=1 SV=1
Length = 274
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 221 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 254
FGF ++EL G+ A +GF L E++TGKG L
Sbjct: 196 FGFTKSNELFVGRLAQLGFAFSLIGEIITGKGAL 229
>sp|P27516|CBR_DUNBA Carotene biosynthesis-related protein CBR, chloroplastic
OS=Dunaliella bardawil GN=CBR PE=1 SV=1
Length = 172
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 219 EGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTG 258
E GF+ E+ING+ A +GF+ L EL TG+ +L G
Sbjct: 69 EVMGFSGAPEIINGRLAMLGFVAALGAELSTGESVLTQLG 108
>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic OS=Solanum
sogarandinum GN=PSBS PE=2 SV=1
Length = 276
Score = 30.8 bits (68), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 220 GFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 254
G GF +EL G+ A IGF L E +TGKG+L
Sbjct: 92 GIGFTKQNELFVGRVAMIGFAASLLGEAITGKGIL 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,553,105
Number of Sequences: 539616
Number of extensions: 5109064
Number of successful extensions: 13587
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 13528
Number of HSP's gapped (non-prelim): 101
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)