Query 024100
Match_columns 272
No_of_seqs 275 out of 2033
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 18:12:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024100.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024100hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xtp_A LMAJ004091AAA; SGPP, st 99.9 7.9E-27 2.7E-31 204.1 13.9 187 66-270 12-198 (254)
2 2ex4_A Adrenal gland protein A 99.9 1.8E-23 6E-28 182.6 12.1 160 102-270 27-186 (241)
3 4gek_A TRNA (CMO5U34)-methyltr 99.8 3.6E-20 1.2E-24 165.5 14.7 118 140-270 58-179 (261)
4 3hnr_A Probable methyltransfer 99.8 4.5E-19 1.5E-23 151.7 14.4 102 157-270 45-146 (220)
5 1pjz_A Thiopurine S-methyltran 99.8 1.6E-19 5.3E-24 154.7 10.7 109 155-264 20-135 (203)
6 3h2b_A SAM-dependent methyltra 99.8 4.7E-19 1.6E-23 150.0 12.6 100 158-269 42-141 (203)
7 3l8d_A Methyltransferase; stru 99.8 3.7E-19 1.3E-23 154.2 11.4 102 156-269 52-153 (242)
8 4hg2_A Methyltransferase type 99.8 2.5E-19 8.4E-24 159.9 10.5 96 157-268 39-134 (257)
9 1vl5_A Unknown conserved prote 99.8 6.1E-19 2.1E-23 155.2 12.9 106 155-269 35-140 (260)
10 2p7i_A Hypothetical protein; p 99.8 5.8E-19 2E-23 152.5 12.4 99 157-269 42-141 (250)
11 2o57_A Putative sarcosine dime 99.8 2E-18 6.9E-23 154.7 15.9 108 155-269 80-187 (297)
12 2gb4_A Thiopurine S-methyltran 99.8 1.2E-18 4E-23 154.9 14.0 111 156-267 67-189 (252)
13 3ou2_A SAM-dependent methyltra 99.8 1.3E-18 4.3E-23 148.1 13.5 103 155-269 44-146 (218)
14 3bus_A REBM, methyltransferase 99.8 2.2E-18 7.7E-23 152.2 15.0 108 155-269 59-166 (273)
15 3e23_A Uncharacterized protein 99.8 1.2E-18 4.2E-23 148.5 11.4 99 156-268 42-140 (211)
16 3dtn_A Putative methyltransfer 99.8 1.3E-18 4.3E-23 150.5 11.4 105 156-270 43-149 (234)
17 3ofk_A Nodulation protein S; N 99.8 4.8E-18 1.7E-22 145.1 15.0 104 156-269 50-154 (216)
18 3ujc_A Phosphoethanolamine N-m 99.8 3.7E-18 1.3E-22 149.4 14.3 107 155-269 53-159 (266)
19 1kpg_A CFA synthase;, cyclopro 99.8 7.1E-18 2.4E-22 150.4 16.0 107 155-269 62-168 (287)
20 3dmg_A Probable ribosomal RNA 99.8 1.2E-18 4.2E-23 163.7 11.4 219 35-269 101-340 (381)
21 3jwh_A HEN1; methyltransferase 99.8 7E-18 2.4E-22 144.5 14.2 112 156-269 28-141 (217)
22 1xxl_A YCGJ protein; structura 99.8 5.7E-18 2E-22 147.7 13.3 106 155-269 19-124 (239)
23 1nkv_A Hypothetical protein YJ 99.8 2.9E-18 1E-22 149.9 11.4 107 155-269 34-140 (256)
24 3g5l_A Putative S-adenosylmeth 99.8 7.3E-18 2.5E-22 147.5 13.8 101 156-268 43-144 (253)
25 3jwg_A HEN1, methyltransferase 99.8 9.9E-18 3.4E-22 143.6 13.7 112 156-269 28-141 (219)
26 3ggd_A SAM-dependent methyltra 99.8 4.4E-18 1.5E-22 148.2 11.4 105 155-269 54-163 (245)
27 3dlc_A Putative S-adenosyl-L-m 99.7 6.3E-18 2.2E-22 143.4 12.0 105 159-270 45-149 (219)
28 3mgg_A Methyltransferase; NYSG 99.7 5.2E-18 1.8E-22 150.3 11.9 117 141-269 24-142 (276)
29 2p8j_A S-adenosylmethionine-de 99.7 7.6E-18 2.6E-22 142.7 12.3 107 156-269 22-128 (209)
30 4htf_A S-adenosylmethionine-de 99.7 6.4E-18 2.2E-22 150.7 11.8 105 157-269 68-173 (285)
31 2fk8_A Methoxy mycolic acid sy 99.7 3E-17 1E-21 148.8 15.9 107 155-269 88-194 (318)
32 3bkw_A MLL3908 protein, S-aden 99.7 1.6E-17 5.4E-22 143.7 13.1 102 156-269 42-144 (243)
33 2pxx_A Uncharacterized protein 99.7 3.1E-17 1.1E-21 138.9 14.6 105 156-269 41-159 (215)
34 3hem_A Cyclopropane-fatty-acyl 99.7 4E-17 1.4E-21 147.0 16.2 107 155-269 70-183 (302)
35 1ve3_A Hypothetical protein PH 99.7 4E-17 1.4E-21 139.8 15.2 105 157-269 38-142 (227)
36 2xvm_A Tellurite resistance pr 99.7 1.4E-17 4.6E-22 139.7 11.9 105 157-269 32-136 (199)
37 3f4k_A Putative methyltransfer 99.7 1.6E-17 5.4E-22 145.3 12.7 106 155-269 44-150 (257)
38 2yqz_A Hypothetical protein TT 99.7 1.6E-17 5.4E-22 145.4 12.6 104 155-268 37-140 (263)
39 3pfg_A N-methyltransferase; N, 99.7 3E-17 1E-21 144.6 14.1 99 157-268 50-150 (263)
40 3vc1_A Geranyl diphosphate 2-C 99.7 2.8E-17 9.4E-22 149.1 14.1 107 155-269 115-221 (312)
41 3kkz_A Uncharacterized protein 99.7 1.3E-17 4.6E-22 147.3 11.7 106 155-269 44-150 (267)
42 3dh0_A SAM dependent methyltra 99.7 9.4E-18 3.2E-22 143.4 10.1 106 155-269 35-143 (219)
43 2gs9_A Hypothetical protein TT 99.7 2.3E-17 7.9E-22 140.3 12.5 97 157-269 36-132 (211)
44 2p35_A Trans-aconitate 2-methy 99.7 1.9E-17 6.3E-22 144.8 11.5 100 155-269 31-132 (259)
45 3ccf_A Cyclopropane-fatty-acyl 99.7 2E-17 7E-22 147.2 11.7 99 156-269 56-154 (279)
46 3ege_A Putative methyltransfer 99.7 1.3E-17 4.3E-22 147.5 10.2 99 155-269 32-130 (261)
47 3gu3_A Methyltransferase; alph 99.7 4.2E-17 1.4E-21 146.0 13.5 105 155-270 20-127 (284)
48 3sm3_A SAM-dependent methyltra 99.7 6.7E-17 2.3E-21 138.7 14.0 112 156-269 29-141 (235)
49 3bxo_A N,N-dimethyltransferase 99.7 4.4E-17 1.5E-21 140.6 12.8 100 157-269 40-141 (239)
50 3lcc_A Putative methyl chlorid 99.7 1.9E-17 6.7E-22 143.4 10.3 106 157-269 66-171 (235)
51 3m70_A Tellurite resistance pr 99.7 3.1E-17 1.1E-21 146.3 11.3 104 157-269 120-223 (286)
52 3dli_A Methyltransferase; PSI- 99.7 2E-17 6.9E-22 144.0 9.8 100 155-269 39-140 (240)
53 3thr_A Glycine N-methyltransfe 99.7 9.2E-18 3.1E-22 149.9 7.7 122 138-269 45-175 (293)
54 1wzn_A SAM-dependent methyltra 99.7 8.6E-17 3E-21 140.4 13.6 117 139-268 27-144 (252)
55 2aot_A HMT, histamine N-methyl 99.7 1.5E-17 5.2E-22 149.4 8.5 107 156-269 51-172 (292)
56 1ri5_A MRNA capping enzyme; me 99.7 1.4E-16 4.7E-21 141.8 14.3 108 156-269 63-174 (298)
57 2pjd_A Ribosomal RNA small sub 99.7 4.2E-17 1.4E-21 150.5 11.3 210 35-269 76-303 (343)
58 3g5t_A Trans-aconitate 3-methy 99.7 5E-17 1.7E-21 146.2 11.5 105 156-267 35-147 (299)
59 1y8c_A S-adenosylmethionine-de 99.7 6.7E-17 2.3E-21 139.6 11.7 115 139-267 24-140 (246)
60 3iv6_A Putative Zn-dependent a 99.7 6.1E-17 2.1E-21 145.0 11.5 100 155-268 43-147 (261)
61 2a14_A Indolethylamine N-methy 99.7 2.7E-17 9.2E-22 146.0 9.1 115 155-269 53-197 (263)
62 4dcm_A Ribosomal RNA large sub 99.7 1.2E-16 3.9E-21 149.9 13.0 217 35-268 100-333 (375)
63 3orh_A Guanidinoacetate N-meth 99.7 2E-17 7E-22 144.9 6.5 103 156-268 59-169 (236)
64 3i9f_A Putative type 11 methyl 99.7 4.5E-17 1.5E-21 134.0 8.2 97 156-269 16-112 (170)
65 1zx0_A Guanidinoacetate N-meth 99.7 3.5E-17 1.2E-21 142.4 7.8 106 156-269 59-170 (236)
66 2kw5_A SLR1183 protein; struct 99.7 7.8E-17 2.7E-21 136.1 9.5 102 157-269 30-131 (202)
67 3cgg_A SAM-dependent methyltra 99.7 3E-16 1E-20 130.4 12.8 100 157-268 46-146 (195)
68 3mti_A RRNA methylase; SAM-dep 99.7 2E-16 6.7E-21 132.0 11.3 117 140-268 10-134 (185)
69 4fsd_A Arsenic methyltransfera 99.7 1.8E-16 6.3E-21 148.2 11.9 113 155-269 81-203 (383)
70 3g2m_A PCZA361.24; SAM-depende 99.7 2E-16 6.9E-21 142.2 11.7 108 157-269 82-190 (299)
71 3d2l_A SAM-dependent methyltra 99.7 4.1E-16 1.4E-20 134.8 12.9 101 157-267 33-135 (243)
72 2vdw_A Vaccinia virus capping 99.7 1.1E-16 3.7E-21 145.8 9.4 112 157-268 48-168 (302)
73 3g07_A 7SK snRNA methylphospha 99.7 2.6E-16 8.9E-21 141.9 11.4 112 157-269 46-220 (292)
74 2avn_A Ubiquinone/menaquinone 99.7 9E-16 3.1E-20 135.3 13.9 97 157-268 54-151 (260)
75 3e8s_A Putative SAM dependent 99.7 2.1E-16 7.1E-21 134.6 9.1 98 157-270 52-153 (227)
76 2i62_A Nicotinamide N-methyltr 99.7 2.1E-16 7.1E-21 138.4 9.0 113 156-269 55-198 (265)
77 3ocj_A Putative exported prote 99.7 2.2E-16 7.7E-21 142.6 9.3 109 155-269 116-227 (305)
78 3dp7_A SAM-dependent methyltra 99.6 1.5E-15 5.1E-20 141.0 13.9 107 157-271 179-289 (363)
79 2qe6_A Uncharacterized protein 99.6 2.6E-15 8.8E-20 134.7 14.1 121 137-269 60-196 (274)
80 2g72_A Phenylethanolamine N-me 99.6 5.1E-16 1.7E-20 139.0 8.6 112 157-269 71-215 (289)
81 3cc8_A Putative methyltransfer 99.6 1.1E-15 3.6E-20 130.5 10.3 97 157-269 32-130 (230)
82 3htx_A HEN1; HEN1, small RNA m 99.6 3.9E-15 1.3E-19 150.3 15.2 110 157-268 721-833 (950)
83 3i53_A O-methyltransferase; CO 99.6 4.7E-15 1.6E-19 135.5 14.5 108 155-271 167-276 (332)
84 3uwp_A Histone-lysine N-methyl 99.6 6.9E-16 2.4E-20 145.9 8.8 144 122-272 141-291 (438)
85 3bgv_A MRNA CAP guanine-N7 met 99.6 1.5E-15 5.1E-20 137.5 10.3 112 157-268 34-154 (313)
86 3m33_A Uncharacterized protein 99.6 1.5E-15 5.2E-20 131.3 9.7 91 156-266 47-139 (226)
87 3bkx_A SAM-dependent methyltra 99.6 1.7E-15 5.8E-20 133.8 9.8 108 155-269 41-159 (275)
88 2r3s_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 135.7 11.8 108 156-271 164-273 (335)
89 3p9n_A Possible methyltransfer 99.6 1.1E-15 3.8E-20 128.3 7.5 107 156-269 43-153 (189)
90 1vlm_A SAM-dependent methyltra 99.6 3.2E-15 1.1E-19 128.4 10.0 92 158-269 48-139 (219)
91 3e05_A Precorrin-6Y C5,15-meth 99.6 7.8E-15 2.7E-19 124.4 11.9 103 155-269 38-142 (204)
92 3lbf_A Protein-L-isoaspartate 99.6 3E-15 1E-19 127.3 9.3 99 155-268 75-173 (210)
93 3mcz_A O-methyltransferase; ad 99.6 4.3E-15 1.5E-19 136.5 10.7 106 158-271 180-289 (352)
94 3gwz_A MMCR; methyltransferase 99.6 7.7E-15 2.6E-19 136.5 12.3 108 155-271 200-309 (369)
95 3fpf_A Mtnas, putative unchara 99.6 4.7E-15 1.6E-19 134.8 10.5 102 155-269 120-222 (298)
96 1dus_A MJ0882; hypothetical pr 99.6 7.8E-15 2.7E-19 121.7 10.8 105 156-269 51-157 (194)
97 1qzz_A RDMB, aclacinomycin-10- 99.6 1.1E-14 3.8E-19 134.6 13.0 107 155-270 180-288 (374)
98 1x19_A CRTF-related protein; m 99.6 8.5E-15 2.9E-19 135.3 11.9 107 155-270 188-296 (359)
99 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.1E-14 3.8E-19 119.9 11.0 102 155-269 23-127 (178)
100 1af7_A Chemotaxis receptor met 99.6 8.4E-15 2.9E-19 131.9 10.4 110 157-267 105-250 (274)
101 4e2x_A TCAB9; kijanose, tetron 99.6 6.9E-16 2.4E-20 145.2 3.3 104 155-269 105-208 (416)
102 3gdh_A Trimethylguanosine synt 99.6 1.6E-16 5.6E-21 138.1 -1.7 102 157-267 78-179 (241)
103 3eey_A Putative rRNA methylase 99.6 1.2E-14 4.1E-19 122.3 9.8 109 156-269 21-139 (197)
104 3njr_A Precorrin-6Y methylase; 99.6 2.1E-14 7.1E-19 123.0 11.3 102 155-269 53-154 (204)
105 2ift_A Putative methylase HI07 99.5 3.9E-15 1.3E-19 127.0 6.5 104 157-269 53-163 (201)
106 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.9E-14 9.8E-19 122.1 11.9 106 157-269 41-156 (214)
107 3grz_A L11 mtase, ribosomal pr 99.5 1.1E-14 3.8E-19 123.4 9.2 100 156-269 59-159 (205)
108 2ip2_A Probable phenazine-spec 99.5 1E-14 3.6E-19 133.0 9.6 104 159-271 169-274 (334)
109 1fbn_A MJ fibrillarin homologu 99.5 3.4E-14 1.2E-18 123.2 12.2 99 155-268 72-177 (230)
110 1tw3_A COMT, carminomycin 4-O- 99.5 3.1E-14 1E-18 131.2 12.4 108 155-271 181-290 (360)
111 2y1w_A Histone-arginine methyl 99.5 2.8E-14 9.7E-19 131.9 11.7 104 156-267 49-153 (348)
112 3evz_A Methyltransferase; NYSG 99.5 2.8E-14 9.4E-19 122.9 10.8 105 156-268 54-178 (230)
113 3dxy_A TRNA (guanine-N(7)-)-me 99.5 6.2E-15 2.1E-19 127.9 6.8 106 157-269 34-150 (218)
114 1nt2_A Fibrillarin-like PRE-rR 99.5 3.3E-14 1.1E-18 122.6 10.9 101 155-268 55-160 (210)
115 3q7e_A Protein arginine N-meth 99.5 2.5E-14 8.5E-19 132.4 10.9 105 156-267 65-171 (349)
116 1xdz_A Methyltransferase GIDB; 99.5 8.9E-15 3E-19 127.7 7.3 102 156-269 69-174 (240)
117 1vbf_A 231AA long hypothetical 99.5 2.5E-14 8.5E-19 123.3 9.9 98 155-269 68-165 (231)
118 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.7E-14 5.8E-19 124.2 8.7 105 157-268 38-152 (213)
119 2fyt_A Protein arginine N-meth 99.5 6.2E-14 2.1E-18 129.4 13.1 103 155-266 62-168 (340)
120 3mq2_A 16S rRNA methyltransfer 99.5 1.4E-14 4.8E-19 123.9 8.1 107 156-268 26-139 (218)
121 3ckk_A TRNA (guanine-N(7)-)-me 99.5 2E-14 6.8E-19 126.1 9.1 112 156-268 45-167 (235)
122 4azs_A Methyltransferase WBDD; 99.5 1.2E-14 4E-19 142.9 8.3 104 157-267 66-171 (569)
123 3reo_A (ISO)eugenol O-methyltr 99.5 2.8E-14 9.7E-19 132.8 10.4 100 155-271 201-302 (368)
124 4a6d_A Hydroxyindole O-methylt 99.5 5.3E-14 1.8E-18 130.3 12.1 108 155-272 177-286 (353)
125 3r0q_C Probable protein argini 99.5 4.2E-14 1.4E-18 132.2 11.4 107 155-269 61-169 (376)
126 2zfu_A Nucleomethylin, cerebra 99.5 2.6E-14 9E-19 121.8 9.1 86 156-269 66-151 (215)
127 3fzg_A 16S rRNA methylase; met 99.5 8.8E-15 3E-19 125.1 6.0 103 156-269 48-152 (200)
128 3lst_A CALO1 methyltransferase 99.5 3.6E-14 1.2E-18 130.7 10.5 105 155-271 182-288 (348)
129 3p9c_A Caffeic acid O-methyltr 99.5 3.2E-14 1.1E-18 132.3 10.2 100 155-271 199-300 (364)
130 1g6q_1 HnRNP arginine N-methyl 99.5 9.4E-14 3.2E-18 127.4 12.8 103 157-266 38-142 (328)
131 1fp1_D Isoliquiritigenin 2'-O- 99.5 2.1E-14 7E-19 133.5 8.3 99 155-270 207-307 (372)
132 2fpo_A Methylase YHHF; structu 99.5 2.5E-14 8.4E-19 122.1 7.7 103 157-268 54-159 (202)
133 1l3i_A Precorrin-6Y methyltran 99.5 9.5E-14 3.3E-18 114.9 11.0 104 155-269 31-134 (192)
134 2yxe_A Protein-L-isoaspartate 99.5 4.6E-14 1.6E-18 120.3 9.3 99 155-268 75-176 (215)
135 1dl5_A Protein-L-isoaspartate 99.5 3.9E-14 1.3E-18 129.1 9.1 100 155-269 73-175 (317)
136 3ntv_A MW1564 protein; rossman 99.5 6.7E-14 2.3E-18 121.8 9.9 101 157-268 71-175 (232)
137 2esr_A Methyltransferase; stru 99.5 2.8E-14 9.7E-19 118.0 7.0 106 156-269 30-138 (177)
138 1fp2_A Isoflavone O-methyltran 99.5 5.4E-14 1.8E-18 129.6 9.6 98 156-270 187-289 (352)
139 3u81_A Catechol O-methyltransf 99.5 3.9E-14 1.3E-18 122.0 7.9 104 157-269 58-170 (221)
140 1jsx_A Glucose-inhibited divis 99.5 9.4E-14 3.2E-18 117.5 9.8 99 157-269 65-165 (207)
141 3dr5_A Putative O-methyltransf 99.5 6.7E-14 2.3E-18 121.6 9.0 102 158-269 57-163 (221)
142 3giw_A Protein of unknown func 99.5 8.4E-14 2.9E-18 125.3 9.7 125 136-269 60-200 (277)
143 1ws6_A Methyltransferase; stru 99.5 2.1E-14 7.2E-19 117.3 5.2 101 157-269 41-147 (171)
144 3lpm_A Putative methyltransfer 99.5 7.5E-14 2.6E-18 123.3 9.1 108 155-268 46-175 (259)
145 1o9g_A RRNA methyltransferase; 99.5 9.4E-14 3.2E-18 121.7 9.6 110 157-269 51-214 (250)
146 2ozv_A Hypothetical protein AT 99.5 2.1E-13 7.2E-18 121.0 11.9 110 156-268 35-169 (260)
147 3q87_B N6 adenine specific DNA 99.5 8.1E-14 2.8E-18 115.7 8.7 94 157-269 23-123 (170)
148 1p91_A Ribosomal RNA large sub 99.5 1.6E-13 5.5E-18 121.0 10.9 92 157-269 85-178 (269)
149 2fhp_A Methylase, putative; al 99.5 3E-14 1E-18 118.2 5.6 105 156-268 43-153 (187)
150 2ld4_A Anamorsin; methyltransf 99.5 2.2E-14 7.4E-19 119.0 4.5 89 154-269 9-101 (176)
151 4df3_A Fibrillarin-like rRNA/T 99.5 5.9E-13 2E-17 117.2 13.8 108 149-268 69-181 (233)
152 2yxd_A Probable cobalt-precorr 99.5 2E-13 6.9E-18 112.2 10.2 99 155-269 33-131 (183)
153 3b3j_A Histone-arginine methyl 99.5 2.1E-13 7.2E-18 131.6 11.9 104 156-267 157-261 (480)
154 3tfw_A Putative O-methyltransf 99.5 2E-13 6.9E-18 120.1 10.6 102 157-269 63-170 (248)
155 3duw_A OMT, O-methyltransferas 99.5 1.6E-13 5.5E-18 117.7 9.4 102 157-269 58-167 (223)
156 3tr6_A O-methyltransferase; ce 99.5 1E-13 3.6E-18 118.9 8.2 103 157-270 64-175 (225)
157 3p2e_A 16S rRNA methylase; met 99.5 6.9E-14 2.4E-18 121.8 7.1 104 156-267 23-137 (225)
158 1yb2_A Hypothetical protein TA 99.5 1.9E-13 6.5E-18 121.8 10.1 102 155-270 108-212 (275)
159 3g89_A Ribosomal RNA small sub 99.5 8E-14 2.7E-18 123.3 7.2 100 156-268 79-183 (249)
160 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.1E-13 1.1E-17 117.1 10.7 102 155-268 75-181 (233)
161 4dzr_A Protein-(glutamine-N5) 99.4 1.6E-14 5.3E-19 121.9 2.2 103 156-267 29-163 (215)
162 3c3p_A Methyltransferase; NP_9 99.4 2E-13 6.8E-18 116.4 8.8 101 157-269 56-160 (210)
163 1g8a_A Fibrillarin-like PRE-rR 99.4 7.3E-13 2.5E-17 114.0 12.3 102 155-268 71-177 (227)
164 2gpy_A O-methyltransferase; st 99.4 2.8E-13 9.7E-18 117.2 9.7 102 157-269 54-160 (233)
165 2frn_A Hypothetical protein PH 99.4 2.7E-13 9.1E-18 121.5 9.8 100 157-269 125-225 (278)
166 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.6E-13 8.7E-18 118.5 9.2 103 155-270 94-199 (258)
167 2vdv_E TRNA (guanine-N(7)-)-me 99.4 2.9E-13 1E-17 118.6 9.6 107 156-268 48-172 (246)
168 3mb5_A SAM-dependent methyltra 99.4 2.6E-13 8.9E-18 118.7 9.2 101 155-269 91-194 (255)
169 2pbf_A Protein-L-isoaspartate 99.4 1.9E-13 6.4E-18 117.6 8.1 104 155-268 78-192 (227)
170 2nxc_A L11 mtase, ribosomal pr 99.4 1.5E-13 5.1E-18 121.6 7.2 100 156-269 119-218 (254)
171 3adn_A Spermidine synthase; am 99.4 3.8E-13 1.3E-17 122.1 9.5 111 156-268 82-197 (294)
172 3bwc_A Spermidine synthase; SA 99.4 2.3E-13 8E-18 123.6 8.1 110 156-268 94-209 (304)
173 2oxt_A Nucleoside-2'-O-methylt 99.4 1.6E-13 5.4E-18 122.8 6.7 104 155-268 72-184 (265)
174 1jg1_A PIMT;, protein-L-isoasp 99.4 4.5E-13 1.6E-17 116.3 9.5 98 155-268 89-188 (235)
175 1zg3_A Isoflavanone 4'-O-methy 99.4 2.8E-13 9.7E-18 125.1 8.5 97 157-270 193-294 (358)
176 3bzb_A Uncharacterized protein 99.4 1.2E-12 4.3E-17 117.2 12.3 109 156-267 78-203 (281)
177 2b3t_A Protein methyltransfera 99.4 6.8E-13 2.3E-17 118.2 10.4 105 157-268 109-237 (276)
178 3r3h_A O-methyltransferase, SA 99.4 7.6E-14 2.6E-18 122.8 4.1 102 157-269 60-170 (242)
179 2wa2_A Non-structural protein 99.4 2.2E-13 7.4E-18 122.7 7.1 113 142-268 71-192 (276)
180 2hnk_A SAM-dependent O-methylt 99.4 3.3E-13 1.1E-17 117.4 7.9 102 157-269 60-181 (239)
181 1ej0_A FTSJ; methyltransferase 99.4 1.5E-13 5.1E-18 111.7 5.3 97 156-269 21-136 (180)
182 1i9g_A Hypothetical protein RV 99.4 4.6E-13 1.6E-17 118.7 8.7 104 155-269 97-203 (280)
183 1r18_A Protein-L-isoaspartate( 99.4 2.3E-13 7.9E-18 117.4 6.4 105 155-268 82-193 (227)
184 2yvl_A TRMI protein, hypotheti 99.4 1.5E-12 5.3E-17 112.8 11.7 103 155-270 89-191 (248)
185 1i1n_A Protein-L-isoaspartate 99.4 6.6E-13 2.3E-17 114.0 9.2 105 155-269 75-182 (226)
186 1u2z_A Histone-lysine N-methyl 99.4 8.2E-13 2.8E-17 125.9 10.7 110 155-271 240-361 (433)
187 3a27_A TYW2, uncharacterized p 99.4 5.7E-13 1.9E-17 119.1 8.5 102 155-270 117-220 (272)
188 1sui_A Caffeoyl-COA O-methyltr 99.4 6.2E-13 2.1E-17 117.2 8.6 102 157-269 79-190 (247)
189 2bm8_A Cephalosporin hydroxyla 99.4 4.1E-13 1.4E-17 117.6 7.3 96 157-269 81-187 (236)
190 3gjy_A Spermidine synthase; AP 99.4 8.6E-13 3E-17 121.0 9.4 105 158-268 90-199 (317)
191 1ne2_A Hypothetical protein TA 99.4 1.3E-12 4.5E-17 110.3 9.5 94 156-266 50-144 (200)
192 3cbg_A O-methyltransferase; cy 99.4 1.7E-12 5.8E-17 112.9 9.3 102 157-269 72-182 (232)
193 3c3y_A Pfomt, O-methyltransfer 99.4 1.8E-12 6.3E-17 113.3 9.6 103 157-269 70-181 (237)
194 2i7c_A Spermidine synthase; tr 99.4 8E-13 2.8E-17 118.9 7.3 110 156-268 77-191 (283)
195 2avd_A Catechol-O-methyltransf 99.4 1.1E-12 3.7E-17 112.8 7.8 103 156-269 68-179 (229)
196 1xj5_A Spermidine synthase 1; 99.4 1.3E-12 4.5E-17 120.6 8.8 110 156-268 119-234 (334)
197 2cmg_A Spermidine synthase; tr 99.4 1.2E-12 4.2E-17 116.8 8.3 99 157-268 72-170 (262)
198 2plw_A Ribosomal RNA methyltra 99.4 1.8E-12 6E-17 109.1 8.8 96 156-268 21-153 (201)
199 1o54_A SAM-dependent O-methylt 99.4 2.4E-12 8.3E-17 114.5 9.9 103 155-270 110-214 (277)
200 1uir_A Polyamine aminopropyltr 99.3 8.8E-13 3E-17 120.4 7.2 110 157-268 77-194 (314)
201 4hc4_A Protein arginine N-meth 99.3 2.4E-12 8.1E-17 120.7 9.9 102 157-266 83-186 (376)
202 1mjf_A Spermidine synthase; sp 99.3 8.1E-13 2.8E-17 118.7 6.5 108 157-268 75-192 (281)
203 3sso_A Methyltransferase; macr 99.3 5.5E-13 1.9E-17 125.7 5.3 95 157-269 216-324 (419)
204 3id6_C Fibrillarin-like rRNA/T 99.3 7.6E-12 2.6E-16 110.0 12.2 101 154-268 73-180 (232)
205 3tma_A Methyltransferase; thum 99.3 2.4E-12 8.2E-17 118.8 9.3 107 155-268 201-316 (354)
206 1ixk_A Methyltransferase; open 99.3 3.1E-12 1.1E-16 116.7 9.9 108 155-268 116-245 (315)
207 1iy9_A Spermidine synthase; ro 99.3 1.4E-12 4.9E-17 116.9 7.5 109 157-268 75-188 (275)
208 2o07_A Spermidine synthase; st 99.3 1.3E-12 4.5E-17 118.9 6.9 111 156-269 94-209 (304)
209 3opn_A Putative hemolysin; str 99.3 4.4E-13 1.5E-17 117.5 3.6 98 157-268 37-136 (232)
210 2h00_A Methyltransferase 10 do 99.3 5.2E-13 1.8E-17 117.0 3.6 106 157-267 65-190 (254)
211 3hp7_A Hemolysin, putative; st 99.3 9.1E-13 3.1E-17 119.5 5.3 96 157-268 85-184 (291)
212 2b25_A Hypothetical protein; s 99.3 4.4E-12 1.5E-16 116.0 9.6 107 155-269 103-219 (336)
213 2pt6_A Spermidine synthase; tr 99.3 2.6E-12 9E-17 117.8 8.0 108 157-268 116-229 (321)
214 2b2c_A Spermidine synthase; be 99.3 1.8E-12 6.2E-17 118.6 6.9 108 157-268 108-221 (314)
215 1nv8_A HEMK protein; class I a 99.3 7.4E-12 2.5E-16 112.7 10.5 102 157-267 123-247 (284)
216 2igt_A SAM dependent methyltra 99.3 2.9E-12 9.8E-17 118.1 7.9 104 157-268 153-271 (332)
217 1wy7_A Hypothetical protein PH 99.3 1.5E-11 5.1E-16 104.0 11.3 99 156-267 48-147 (207)
218 1inl_A Spermidine synthase; be 99.3 4.2E-12 1.4E-16 115.0 8.0 109 157-268 90-204 (296)
219 2p41_A Type II methyltransfera 99.3 4.1E-12 1.4E-16 115.8 7.1 102 155-268 80-190 (305)
220 1zq9_A Probable dimethyladenos 99.3 1.1E-11 3.7E-16 111.6 9.5 103 155-266 26-144 (285)
221 2qm3_A Predicted methyltransfe 99.3 1.4E-11 4.7E-16 114.8 10.1 97 157-264 172-272 (373)
222 3frh_A 16S rRNA methylase; met 99.3 1.4E-11 4.8E-16 108.9 9.5 103 156-269 104-206 (253)
223 3ajd_A Putative methyltransfer 99.3 8.4E-12 2.9E-16 111.4 8.1 108 155-268 81-210 (274)
224 2nyu_A Putative ribosomal RNA 99.2 5.4E-12 1.9E-16 105.5 5.7 98 155-269 20-145 (196)
225 3lec_A NADB-rossmann superfami 99.2 1.6E-11 5.6E-16 107.7 8.9 103 156-268 20-124 (230)
226 2yxl_A PH0851 protein, 450AA l 99.2 5.5E-11 1.9E-15 113.6 12.9 108 155-268 257-388 (450)
227 3gnl_A Uncharacterized protein 99.2 2E-11 7E-16 108.0 8.8 103 156-268 20-124 (244)
228 3kr9_A SAM-dependent methyltra 99.2 2.2E-11 7.4E-16 106.6 8.8 102 156-268 14-118 (225)
229 3lcv_B Sisomicin-gentamicin re 99.2 1.9E-11 6.6E-16 109.1 8.1 104 156-269 131-236 (281)
230 3tm4_A TRNA (guanine N2-)-meth 99.2 2.9E-11 1E-15 112.8 9.4 106 156-268 216-329 (373)
231 3dou_A Ribosomal RNA large sub 99.2 5.2E-11 1.8E-15 101.0 9.0 96 155-268 23-138 (191)
232 2b78_A Hypothetical protein SM 99.2 1.7E-11 5.8E-16 114.9 6.2 107 157-269 212-331 (385)
233 1wxx_A TT1595, hypothetical pr 99.2 1.1E-11 3.7E-16 115.9 4.9 106 157-269 209-325 (382)
234 2h1r_A Dimethyladenosine trans 99.2 5.2E-11 1.8E-15 107.9 9.1 99 155-263 40-153 (299)
235 2as0_A Hypothetical protein PH 99.2 2.4E-11 8.2E-16 113.9 6.8 106 157-268 217-334 (396)
236 2frx_A Hypothetical protein YE 99.2 1.1E-10 3.7E-15 112.7 11.4 106 157-268 117-245 (479)
237 3c0k_A UPF0064 protein YCCW; P 99.2 3.6E-11 1.2E-15 112.8 7.0 107 157-269 220-339 (396)
238 1sqg_A SUN protein, FMU protei 99.1 1.7E-10 5.8E-15 109.4 10.6 107 155-269 244-374 (429)
239 2f8l_A Hypothetical protein LM 99.1 2.1E-10 7.3E-15 105.4 10.8 104 157-268 130-255 (344)
240 3k6r_A Putative transferase PH 99.1 1.6E-10 5.6E-15 104.0 9.6 100 156-267 124-223 (278)
241 1yub_A Ermam, rRNA methyltrans 99.1 1.1E-12 3.9E-17 115.0 -5.1 101 155-267 27-143 (245)
242 3gru_A Dimethyladenosine trans 99.1 9E-11 3.1E-15 106.6 7.2 89 155-253 48-136 (295)
243 2yx1_A Hypothetical protein MJ 99.1 1.4E-10 4.8E-15 106.6 8.7 97 157-269 195-291 (336)
244 1qam_A ERMC' methyltransferase 99.1 3.5E-10 1.2E-14 99.4 10.7 74 155-238 28-102 (244)
245 4dmg_A Putative uncharacterize 99.1 8.8E-11 3E-15 110.6 7.2 104 157-268 214-325 (393)
246 3v97_A Ribosomal RNA large sub 99.1 1.2E-10 4.1E-15 117.2 8.2 107 157-270 539-658 (703)
247 1uwv_A 23S rRNA (uracil-5-)-me 99.1 8.3E-10 2.8E-14 104.9 13.2 101 156-269 285-389 (433)
248 3m6w_A RRNA methylase; rRNA me 99.1 1.1E-10 3.9E-15 112.0 6.8 107 155-268 99-228 (464)
249 3fut_A Dimethyladenosine trans 99.1 2.8E-10 9.7E-15 102.1 8.4 88 155-254 45-133 (271)
250 2jjq_A Uncharacterized RNA met 99.1 6.9E-10 2.3E-14 105.5 11.3 97 157-268 290-386 (425)
251 3m4x_A NOL1/NOP2/SUN family pr 99.0 2.7E-10 9.1E-15 109.3 6.8 107 155-267 103-232 (456)
252 3tqs_A Ribosomal RNA small sub 99.0 1.1E-09 3.7E-14 97.4 9.0 88 155-253 27-118 (255)
253 2qfm_A Spermine synthase; sper 99.0 8.8E-10 3E-14 102.6 7.9 112 156-268 187-313 (364)
254 3bt7_A TRNA (uracil-5-)-methyl 98.9 5.5E-10 1.9E-14 103.9 5.7 96 158-268 214-325 (369)
255 3k0b_A Predicted N6-adenine-sp 98.9 1.9E-09 6.6E-14 101.4 8.9 106 155-267 199-348 (393)
256 3ldg_A Putative uncharacterize 98.9 4.8E-09 1.6E-13 98.4 10.7 106 155-267 192-341 (384)
257 2ih2_A Modification methylase 98.9 2.1E-09 7.2E-14 100.5 7.8 95 157-267 39-162 (421)
258 2okc_A Type I restriction enzy 98.9 3.7E-09 1.3E-13 100.6 9.3 107 156-267 170-305 (445)
259 3ldu_A Putative methylase; str 98.8 8.8E-09 3E-13 96.6 8.9 106 155-267 193-342 (385)
260 2xyq_A Putative 2'-O-methyl tr 98.8 9.7E-09 3.3E-13 93.0 7.5 91 155-268 61-170 (290)
261 2r6z_A UPF0341 protein in RSP 98.8 2.9E-09 1E-13 94.6 3.4 80 157-242 83-173 (258)
262 1qyr_A KSGA, high level kasuga 98.7 8.5E-09 2.9E-13 91.3 6.0 86 155-252 19-111 (252)
263 2b9e_A NOL1/NOP2/SUN domain fa 98.7 4E-08 1.4E-12 89.6 10.0 76 155-236 100-180 (309)
264 3ftd_A Dimethyladenosine trans 98.7 1.3E-08 4.5E-13 89.9 6.2 81 155-247 29-111 (249)
265 3o4f_A Spermidine synthase; am 98.7 8.6E-08 2.9E-12 86.8 11.4 108 156-268 82-197 (294)
266 3uzu_A Ribosomal RNA small sub 98.7 1.8E-08 6.1E-13 90.6 6.4 80 155-246 40-129 (279)
267 3b5i_A S-adenosyl-L-methionine 98.7 1.6E-07 5.6E-12 87.7 12.9 112 157-268 52-224 (374)
268 3evf_A RNA-directed RNA polyme 98.7 2.8E-08 9.7E-13 88.9 7.0 117 140-268 61-183 (277)
269 2dul_A N(2),N(2)-dimethylguano 98.6 2.5E-08 8.4E-13 93.4 6.0 106 157-268 47-163 (378)
270 1m6y_A S-adenosyl-methyltransf 98.6 2.6E-08 9E-13 90.5 5.7 76 155-237 24-105 (301)
271 3axs_A Probable N(2),N(2)-dime 98.6 4.5E-08 1.5E-12 92.1 6.7 101 157-268 52-157 (392)
272 2oyr_A UPF0341 protein YHIQ; a 98.6 1.6E-08 5.4E-13 90.1 3.0 83 159-242 90-176 (258)
273 4gqb_A Protein arginine N-meth 98.6 1.9E-07 6.5E-12 92.7 10.9 103 157-266 357-464 (637)
274 3gcz_A Polyprotein; flavivirus 98.6 4.6E-08 1.6E-12 87.7 5.5 182 68-268 9-200 (282)
275 3ll7_A Putative methyltransfer 98.5 3E-08 1E-12 93.8 3.5 76 157-237 93-170 (410)
276 3cvo_A Methyltransferase-like 98.5 1.1E-06 3.9E-11 75.4 12.9 95 158-267 31-152 (202)
277 3v97_A Ribosomal RNA large sub 98.5 2.7E-07 9.2E-12 92.8 9.9 109 155-268 188-346 (703)
278 2ar0_A M.ecoki, type I restric 98.5 3.7E-07 1.2E-11 89.2 9.2 106 156-267 168-310 (541)
279 2efj_A 3,7-dimethylxanthine me 98.5 8.5E-07 2.9E-11 83.1 10.9 103 158-268 53-224 (384)
280 3ua3_A Protein arginine N-meth 98.4 1E-07 3.6E-12 95.0 4.2 103 158-266 410-531 (745)
281 3c6k_A Spermine synthase; sper 98.3 4.6E-07 1.6E-11 84.7 6.3 113 156-268 204-330 (381)
282 1m6e_X S-adenosyl-L-methionnin 98.3 1.7E-06 5.7E-11 80.5 9.3 108 156-268 50-208 (359)
283 3eld_A Methyltransferase; flav 98.2 4.4E-06 1.5E-10 75.3 8.6 104 155-268 79-190 (300)
284 2qy6_A UPF0209 protein YFCK; s 98.2 1.5E-06 5.2E-11 77.1 5.4 109 157-267 60-211 (257)
285 3s1s_A Restriction endonucleas 98.1 7.1E-06 2.4E-10 83.1 9.8 108 157-267 321-463 (878)
286 3lkd_A Type I restriction-modi 98.1 1E-05 3.6E-10 78.9 10.7 105 157-266 221-355 (542)
287 4auk_A Ribosomal RNA large sub 98.1 7.9E-06 2.7E-10 76.1 9.3 72 155-240 209-280 (375)
288 2px2_A Genome polyprotein [con 98.0 1.1E-05 3.8E-10 71.5 7.7 115 140-268 60-182 (269)
289 3khk_A Type I restriction-modi 98.0 6.1E-06 2.1E-10 80.6 6.7 105 158-267 245-393 (544)
290 3lkz_A Non-structural protein 98.0 4.1E-05 1.4E-09 69.1 10.9 181 66-267 11-202 (321)
291 1wg8_A Predicted S-adenosylmet 98.0 9.1E-06 3.1E-10 73.0 6.7 81 155-246 20-107 (285)
292 2k4m_A TR8_protein, UPF0146 pr 97.9 5.8E-06 2E-10 67.4 3.6 77 156-258 34-112 (153)
293 4fzv_A Putative methyltransfer 97.8 6E-05 2.1E-09 70.0 8.9 111 155-266 146-281 (359)
294 2wk1_A NOVP; transferase, O-me 97.8 7.5E-05 2.6E-09 67.1 8.6 105 156-269 105-244 (282)
295 3p8z_A Mtase, non-structural p 97.7 0.00023 7.9E-09 62.4 10.3 114 139-267 64-184 (267)
296 2vz8_A Fatty acid synthase; tr 97.7 6.7E-06 2.3E-10 92.6 0.8 102 157-269 1240-1348(2512)
297 2zig_A TTHA0409, putative modi 97.3 0.00021 7.2E-09 64.0 5.6 46 156-202 234-279 (297)
298 1rjd_A PPM1P, carboxy methyl t 97.1 0.0029 1E-07 57.9 10.2 112 157-270 97-233 (334)
299 3ufb_A Type I restriction-modi 96.9 0.0053 1.8E-07 59.6 11.2 106 156-267 216-360 (530)
300 1i4w_A Mitochondrial replicati 96.8 0.0022 7.4E-08 59.3 7.0 59 158-225 59-118 (353)
301 2uyo_A Hypothetical protein ML 96.5 0.032 1.1E-06 50.4 12.3 103 160-267 105-216 (310)
302 1g60_A Adenine-specific methyl 96.4 0.0067 2.3E-07 53.1 7.1 45 156-201 211-255 (260)
303 3r24_A NSP16, 2'-O-methyl tran 96.3 0.0055 1.9E-07 55.3 6.2 92 155-268 107-216 (344)
304 2oo3_A Protein involved in cat 96.3 0.0039 1.3E-07 55.9 5.1 99 158-267 92-196 (283)
305 3tka_A Ribosomal RNA small sub 95.9 0.0097 3.3E-07 54.6 5.9 73 155-237 55-135 (347)
306 1g55_A DNA cytosine methyltran 95.9 0.0076 2.6E-07 55.1 5.2 70 159-239 3-77 (343)
307 3g7u_A Cytosine-specific methy 95.9 0.033 1.1E-06 51.6 9.3 68 159-237 3-78 (376)
308 2dph_A Formaldehyde dismutase; 95.6 0.038 1.3E-06 51.0 8.5 98 155-268 183-298 (398)
309 1f8f_A Benzyl alcohol dehydrog 95.0 0.09 3.1E-06 47.8 9.0 94 155-268 188-288 (371)
310 2py6_A Methyltransferase FKBM; 94.4 0.051 1.7E-06 50.8 5.9 48 155-202 224-274 (409)
311 1pqw_A Polyketide synthase; ro 94.2 0.16 5.6E-06 41.6 8.1 91 155-268 36-136 (198)
312 1kol_A Formaldehyde dehydrogen 94.2 0.3 1E-05 44.7 10.7 98 155-268 183-299 (398)
313 3qv2_A 5-cytosine DNA methyltr 94.2 0.057 1.9E-06 49.1 5.6 101 157-270 9-130 (327)
314 2c7p_A Modification methylase 94.2 0.065 2.2E-06 48.7 5.9 67 158-237 11-78 (327)
315 1v3u_A Leukotriene B4 12- hydr 93.8 0.17 5.7E-06 45.2 7.9 91 155-268 143-243 (333)
316 3two_A Mannitol dehydrogenase; 93.7 0.084 2.9E-06 47.6 5.8 90 155-268 174-264 (348)
317 2j3h_A NADP-dependent oxidored 93.6 0.21 7.2E-06 44.7 8.3 94 155-268 153-254 (345)
318 3tos_A CALS11; methyltransfera 93.4 0.24 8.3E-06 43.5 8.0 149 105-269 22-217 (257)
319 3s2e_A Zinc-containing alcohol 93.2 0.22 7.5E-06 44.6 7.6 94 155-268 164-262 (340)
320 1zkd_A DUF185; NESG, RPR58, st 93.1 0.33 1.1E-05 45.2 8.9 46 156-201 79-132 (387)
321 1pl8_A Human sorbitol dehydrog 93.1 0.29 9.9E-06 44.2 8.4 94 155-268 169-272 (356)
322 3fwz_A Inner membrane protein 93.0 0.61 2.1E-05 36.2 9.1 92 158-267 7-103 (140)
323 1lss_A TRK system potassium up 92.9 1.4 4.7E-05 33.2 10.9 92 159-267 5-101 (140)
324 4ej6_A Putative zinc-binding d 92.9 0.51 1.7E-05 42.9 9.7 97 155-268 180-283 (370)
325 1e3j_A NADP(H)-dependent ketos 92.9 0.57 2E-05 42.1 10.0 94 155-268 166-270 (352)
326 4b7c_A Probable oxidoreductase 92.8 0.32 1.1E-05 43.3 8.2 94 155-268 147-247 (336)
327 1boo_A Protein (N-4 cytosine-s 92.8 0.24 8.1E-06 44.6 7.2 46 156-202 251-296 (323)
328 3fpc_A NADP-dependent alcohol 92.7 0.36 1.2E-05 43.5 8.3 94 155-268 164-265 (352)
329 1uuf_A YAHK, zinc-type alcohol 92.6 0.073 2.5E-06 48.7 3.6 94 155-268 192-287 (369)
330 3m6i_A L-arabinitol 4-dehydrog 92.5 0.45 1.6E-05 42.9 8.7 95 155-268 177-282 (363)
331 2h6e_A ADH-4, D-arabinose 1-de 92.3 0.075 2.6E-06 47.9 3.1 94 157-268 170-268 (344)
332 3c85_A Putative glutathione-re 91.9 1.1 3.8E-05 36.0 9.6 92 158-267 39-137 (183)
333 1jvb_A NAD(H)-dependent alcoho 91.7 0.34 1.2E-05 43.5 6.9 94 155-268 168-270 (347)
334 3uog_A Alcohol dehydrogenase; 91.4 0.6 2.1E-05 42.2 8.2 93 155-268 187-286 (363)
335 3gms_A Putative NADPH:quinone 91.3 0.52 1.8E-05 42.2 7.7 93 155-268 142-242 (340)
336 3nx4_A Putative oxidoreductase 91.2 0.36 1.2E-05 42.7 6.4 89 160-268 149-240 (324)
337 2hcy_A Alcohol dehydrogenase 1 91.1 0.3 1E-05 43.9 5.8 92 155-268 167-268 (347)
338 3qwb_A Probable quinone oxidor 90.9 0.59 2E-05 41.6 7.6 93 155-268 146-246 (334)
339 3ubt_Y Modification methylase 90.8 0.3 1E-05 43.5 5.5 64 160-236 2-67 (331)
340 1rjw_A ADH-HT, alcohol dehydro 90.7 0.94 3.2E-05 40.5 8.8 92 155-268 162-260 (339)
341 2qrv_A DNA (cytosine-5)-methyl 90.5 0.33 1.1E-05 43.4 5.4 70 155-236 13-89 (295)
342 1yb5_A Quinone oxidoreductase; 90.5 0.9 3.1E-05 40.9 8.5 93 155-268 168-268 (351)
343 3llv_A Exopolyphosphatase-rela 90.2 1.9 6.4E-05 33.0 9.1 68 159-239 7-79 (141)
344 4h0n_A DNMT2; SAH binding, tra 89.9 0.21 7.1E-06 45.5 3.7 66 159-236 4-75 (333)
345 2d8a_A PH0655, probable L-thre 89.9 1.1 3.7E-05 40.2 8.4 93 155-268 166-266 (348)
346 1eg2_A Modification methylase 89.9 0.5 1.7E-05 42.6 6.2 46 156-202 241-289 (319)
347 2zig_A TTHA0409, putative modi 89.9 0.18 6E-06 44.8 3.1 57 212-268 20-96 (297)
348 2eih_A Alcohol dehydrogenase; 89.8 0.88 3E-05 40.7 7.7 93 155-268 164-264 (343)
349 3uko_A Alcohol dehydrogenase c 89.7 0.2 6.9E-06 45.6 3.5 94 155-268 191-294 (378)
350 3goh_A Alcohol dehydrogenase, 89.7 0.44 1.5E-05 42.1 5.6 89 154-268 139-228 (315)
351 4eye_A Probable oxidoreductase 89.7 0.71 2.4E-05 41.4 7.1 92 155-268 157-256 (342)
352 2c0c_A Zinc binding alcohol de 89.5 1.4 4.9E-05 39.7 9.0 93 155-268 161-260 (362)
353 3jyn_A Quinone oxidoreductase; 89.5 1 3.4E-05 40.0 7.8 93 155-268 138-238 (325)
354 2zb4_A Prostaglandin reductase 89.4 1.3 4.5E-05 39.7 8.6 94 155-268 156-259 (357)
355 2b5w_A Glucose dehydrogenase; 89.3 0.92 3.1E-05 40.8 7.5 89 159-268 174-272 (357)
356 3jv7_A ADH-A; dehydrogenase, n 89.1 1 3.5E-05 40.2 7.7 93 155-268 169-269 (345)
357 1qor_A Quinone oxidoreductase; 89.0 0.86 2.9E-05 40.3 7.0 93 155-268 138-238 (327)
358 3l9w_A Glutathione-regulated p 88.9 1.8 6.3E-05 40.2 9.5 92 159-268 5-101 (413)
359 1cdo_A Alcohol dehydrogenase; 88.8 1 3.5E-05 40.8 7.5 94 155-268 190-293 (374)
360 1p0f_A NADP-dependent alcohol 88.6 1.2 4E-05 40.3 7.7 94 155-268 189-292 (373)
361 2fzw_A Alcohol dehydrogenase c 88.6 1.2 4.1E-05 40.2 7.7 94 155-268 188-291 (373)
362 2jhf_A Alcohol dehydrogenase E 88.4 1.4 4.7E-05 39.9 8.1 94 155-268 189-292 (374)
363 1vj0_A Alcohol dehydrogenase, 88.4 1.1 3.9E-05 40.7 7.5 93 155-268 193-297 (380)
364 2j8z_A Quinone oxidoreductase; 88.1 1.7 5.8E-05 39.1 8.5 93 155-268 160-260 (354)
365 1xa0_A Putative NADPH dependen 88.1 0.59 2E-05 41.5 5.3 94 155-268 146-245 (328)
366 3vyw_A MNMC2; tRNA wobble urid 87.8 1.4 4.7E-05 39.7 7.5 105 157-266 96-223 (308)
367 3ip1_A Alcohol dehydrogenase, 87.8 2.8 9.4E-05 38.4 9.8 45 155-199 211-257 (404)
368 1id1_A Putative potassium chan 87.7 4.3 0.00015 31.5 9.7 92 159-267 4-103 (153)
369 1pjc_A Protein (L-alanine dehy 87.6 0.27 9.1E-06 45.0 2.7 99 158-268 167-266 (361)
370 2dq4_A L-threonine 3-dehydroge 87.4 0.77 2.6E-05 41.1 5.7 92 155-268 163-261 (343)
371 3krt_A Crotonyl COA reductase; 87.2 3 0.0001 38.9 9.8 94 154-268 225-343 (456)
372 1tt7_A YHFP; alcohol dehydroge 87.0 0.69 2.3E-05 41.0 5.0 96 155-268 147-246 (330)
373 3ius_A Uncharacterized conserv 87.0 4.7 0.00016 34.3 10.3 82 159-257 6-90 (286)
374 2cdc_A Glucose dehydrogenase g 86.9 1.3 4.6E-05 39.9 7.0 88 158-268 181-277 (366)
375 1piw_A Hypothetical zinc-type 86.5 0.32 1.1E-05 44.0 2.6 95 155-268 177-275 (360)
376 1e3i_A Alcohol dehydrogenase, 86.5 1.7 5.7E-05 39.4 7.4 94 155-268 193-296 (376)
377 2cf5_A Atccad5, CAD, cinnamyl 86.4 0.27 9.3E-06 44.5 2.1 95 155-268 177-274 (357)
378 4dup_A Quinone oxidoreductase; 86.3 1.6 5.4E-05 39.2 7.1 93 155-268 165-264 (353)
379 2eez_A Alanine dehydrogenase; 86.1 0.4 1.4E-05 43.9 3.0 100 157-268 165-265 (369)
380 1iz0_A Quinone oxidoreductase; 86.1 0.39 1.3E-05 42.1 2.9 92 155-268 123-217 (302)
381 1yqd_A Sinapyl alcohol dehydro 86.0 0.42 1.4E-05 43.4 3.1 93 157-268 187-281 (366)
382 4a0s_A Octenoyl-COA reductase/ 85.9 2 6.9E-05 39.8 7.8 97 154-268 217-335 (447)
383 2vhw_A Alanine dehydrogenase; 85.7 0.39 1.3E-05 44.2 2.7 100 157-268 167-267 (377)
384 2g1u_A Hypothetical protein TM 85.6 1.6 5.4E-05 34.3 6.0 95 156-267 17-116 (155)
385 1wly_A CAAR, 2-haloacrylate re 85.5 1.9 6.6E-05 38.2 7.2 93 155-268 143-243 (333)
386 3gaz_A Alcohol dehydrogenase s 85.4 2.8 9.4E-05 37.5 8.2 90 155-268 148-245 (343)
387 3l4b_C TRKA K+ channel protien 84.8 5.7 0.0002 32.8 9.5 89 160-267 2-97 (218)
388 3me5_A Cytosine-specific methy 84.8 0.93 3.2E-05 43.3 5.0 60 157-225 87-147 (482)
389 3ggo_A Prephenate dehydrogenas 84.6 6.8 0.00023 34.8 10.4 91 159-270 34-129 (314)
390 4f3n_A Uncharacterized ACR, CO 84.5 1.2 4.2E-05 42.0 5.5 44 158-201 138-187 (432)
391 3fbg_A Putative arginate lyase 84.4 3.3 0.00011 36.9 8.3 91 157-268 150-247 (346)
392 3oig_A Enoyl-[acyl-carrier-pro 83.9 3.4 0.00012 35.0 7.9 107 158-270 7-148 (266)
393 4eso_A Putative oxidoreductase 83.4 3.5 0.00012 35.0 7.7 103 158-270 8-139 (255)
394 4dvj_A Putative zinc-dependent 83.4 5.6 0.00019 35.8 9.5 93 157-268 171-269 (363)
395 3pxx_A Carveol dehydrogenase; 83.1 3.5 0.00012 35.2 7.7 106 158-270 10-154 (287)
396 1boo_A Protein (N-4 cytosine-s 83.1 0.66 2.3E-05 41.6 3.0 57 212-268 13-83 (323)
397 3iei_A Leucine carboxyl methyl 82.8 12 0.00042 33.7 11.4 112 158-270 91-230 (334)
398 3tqh_A Quinone oxidoreductase; 82.6 3.3 0.00011 36.5 7.4 92 155-268 150-244 (321)
399 4eez_A Alcohol dehydrogenase 1 81.2 2.7 9.2E-05 37.3 6.3 97 155-268 161-262 (348)
400 4a2c_A Galactitol-1-phosphate 80.8 10 0.00036 33.3 10.1 94 155-268 158-259 (346)
401 3pvc_A TRNA 5-methylaminomethy 80.7 1.5 5.2E-05 43.2 4.9 109 157-266 58-208 (689)
402 4dcm_A Ribosomal RNA large sub 79.8 8.7 0.0003 35.0 9.4 98 157-268 38-135 (375)
403 3iht_A S-adenosyl-L-methionine 79.1 0.35 1.2E-05 39.6 -0.3 30 157-187 40-71 (174)
404 2ew2_A 2-dehydropantoate 2-red 78.3 18 0.00063 30.9 10.7 98 160-268 5-107 (316)
405 3ps9_A TRNA 5-methylaminomethy 77.6 2.9 9.8E-05 41.0 5.7 109 157-266 66-216 (676)
406 2g5c_A Prephenate dehydrogenas 77.4 14 0.00046 31.6 9.5 89 160-268 3-95 (281)
407 3d1l_A Putative NADP oxidoredu 77.0 10 0.00034 32.2 8.5 89 159-268 11-101 (266)
408 3d4o_A Dipicolinate synthase s 75.6 5.6 0.00019 34.8 6.6 88 157-268 154-243 (293)
409 2f1k_A Prephenate dehydrogenas 75.6 14 0.00047 31.5 9.0 88 160-268 2-90 (279)
410 2zwa_A Leucine carboxyl methyl 75.2 9.4 0.00032 37.6 8.8 111 158-271 108-256 (695)
411 3qiv_A Short-chain dehydrogena 74.2 12 0.00042 31.1 8.2 74 158-239 9-95 (253)
412 3p2y_A Alanine dehydrogenase/p 73.2 1 3.5E-05 41.8 1.1 42 157-198 183-225 (381)
413 3gqv_A Enoyl reductase; medium 73.1 13 0.00043 33.5 8.5 92 156-268 163-262 (371)
414 2rir_A Dipicolinate synthase, 73.0 6.3 0.00021 34.5 6.2 88 157-268 156-245 (300)
415 3rkr_A Short chain oxidoreduct 73.0 13 0.00044 31.4 8.1 74 158-239 29-115 (262)
416 1l7d_A Nicotinamide nucleotide 72.8 1.6 5.5E-05 40.0 2.4 42 157-198 171-213 (384)
417 3o26_A Salutaridine reductase; 72.8 27 0.00093 29.6 10.3 76 158-240 12-101 (311)
418 2vn8_A Reticulon-4-interacting 72.7 1.2 4.2E-05 40.3 1.5 94 155-268 181-279 (375)
419 1zcj_A Peroxisomal bifunctiona 72.4 16 0.00055 34.2 9.3 99 159-267 38-148 (463)
420 3swr_A DNA (cytosine-5)-methyl 72.3 3.6 0.00012 42.8 5.0 44 157-201 539-584 (1002)
421 4dio_A NAD(P) transhydrogenase 72.2 3.9 0.00013 38.2 4.8 42 157-198 189-231 (405)
422 2ae2_A Protein (tropinone redu 72.2 21 0.0007 30.0 9.2 75 158-239 9-96 (260)
423 3ce6_A Adenosylhomocysteinase; 72.0 6.5 0.00022 37.5 6.5 88 156-268 272-360 (494)
424 3k31_A Enoyl-(acyl-carrier-pro 71.9 8.8 0.0003 33.3 6.9 105 158-270 30-169 (296)
425 3g0o_A 3-hydroxyisobutyrate de 71.6 13 0.00043 32.5 7.9 90 159-268 8-101 (303)
426 3k96_A Glycerol-3-phosphate de 71.5 18 0.00061 32.7 9.1 102 158-268 29-132 (356)
427 2aef_A Calcium-gated potassium 71.2 12 0.00041 31.0 7.4 88 158-267 9-103 (234)
428 3ek2_A Enoyl-(acyl-carrier-pro 71.2 7.8 0.00027 32.6 6.2 107 156-270 12-154 (271)
429 4e6p_A Probable sorbitol dehyd 70.9 16 0.00054 30.7 8.2 71 158-239 8-91 (259)
430 3dmg_A Probable ribosomal RNA 70.8 20 0.00067 32.7 9.3 93 158-268 46-138 (381)
431 3tjr_A Short chain dehydrogena 70.6 13 0.00045 32.2 7.8 74 158-239 31-117 (301)
432 1hdc_A 3-alpha, 20 beta-hydrox 70.6 17 0.00058 30.5 8.3 72 158-239 5-88 (254)
433 3uve_A Carveol dehydrogenase ( 70.4 23 0.00078 30.1 9.2 75 158-239 11-113 (286)
434 3grk_A Enoyl-(acyl-carrier-pro 70.3 18 0.00063 31.2 8.6 105 158-270 31-170 (293)
435 3hwr_A 2-dehydropantoate 2-red 70.1 26 0.00091 30.7 9.7 96 157-268 18-119 (318)
436 3dfz_A SIRC, precorrin-2 dehyd 69.7 24 0.00081 29.9 8.9 66 157-237 30-98 (223)
437 3gvc_A Oxidoreductase, probabl 69.6 14 0.00049 31.6 7.7 72 158-240 29-113 (277)
438 3edm_A Short chain dehydrogena 69.2 8.8 0.0003 32.5 6.2 73 158-238 8-94 (259)
439 4ft4_B DNA (cytosine-5)-methyl 68.8 11 0.00038 37.6 7.6 44 157-201 211-261 (784)
440 1wma_A Carbonyl reductase [NAD 67.8 12 0.0004 31.2 6.6 73 158-238 4-90 (276)
441 3awd_A GOX2181, putative polyo 67.6 16 0.00055 30.3 7.5 75 158-239 13-99 (260)
442 4g65_A TRK system potassium up 67.3 7.1 0.00024 36.7 5.6 67 158-236 3-74 (461)
443 1spx_A Short-chain reductase f 67.3 13 0.00043 31.6 6.8 77 159-239 7-95 (278)
444 1eg2_A Modification methylase 67.2 2.2 7.5E-05 38.3 1.9 56 213-268 38-105 (319)
445 1ja9_A 4HNR, 1,3,6,8-tetrahydr 67.0 14 0.00048 30.9 7.0 74 158-239 21-108 (274)
446 3ijr_A Oxidoreductase, short c 66.8 18 0.00063 31.1 7.9 105 158-270 47-183 (291)
447 4dkj_A Cytosine-specific methy 66.5 5.8 0.0002 36.8 4.7 43 158-201 10-59 (403)
448 2a4k_A 3-oxoacyl-[acyl carrier 66.4 35 0.0012 28.8 9.5 72 159-240 7-90 (263)
449 3t7c_A Carveol dehydrogenase; 66.3 20 0.00068 31.0 8.0 74 158-239 28-126 (299)
450 3is3_A 17BETA-hydroxysteroid d 65.9 25 0.00086 29.7 8.4 105 158-270 18-153 (270)
451 3ak4_A NADH-dependent quinucli 65.8 22 0.00077 29.7 8.1 72 158-239 12-95 (263)
452 1ae1_A Tropinone reductase-I; 65.6 23 0.0008 30.0 8.2 75 158-239 21-108 (273)
453 3trk_A Nonstructural polyprote 65.4 3.3 0.00011 36.7 2.6 45 224-268 205-258 (324)
454 2hmt_A YUAA protein; RCK, KTN, 64.8 29 0.001 25.5 7.8 90 159-266 7-101 (144)
455 2cfc_A 2-(R)-hydroxypropyl-COM 64.2 35 0.0012 28.0 8.9 74 160-239 4-89 (250)
456 2h7i_A Enoyl-[acyl-carrier-pro 63.7 13 0.00043 31.6 6.1 72 158-239 7-96 (269)
457 1qsg_A Enoyl-[acyl-carrier-pro 63.4 15 0.00051 31.0 6.4 70 159-239 10-96 (265)
458 3tri_A Pyrroline-5-carboxylate 61.9 17 0.00057 31.5 6.6 86 159-266 4-95 (280)
459 3c24_A Putative oxidoreductase 61.9 40 0.0014 28.8 9.1 85 160-267 13-99 (286)
460 4e12_A Diketoreductase; oxidor 61.6 27 0.00091 30.0 7.9 102 160-268 6-120 (283)
461 1xq1_A Putative tropinone redu 61.6 27 0.00093 29.1 7.8 75 158-239 14-101 (266)
462 3v2g_A 3-oxoacyl-[acyl-carrier 61.6 33 0.0011 29.1 8.5 106 157-270 30-166 (271)
463 4da9_A Short-chain dehydrogena 61.5 31 0.001 29.5 8.2 76 158-240 29-117 (280)
464 4e21_A 6-phosphogluconate dehy 60.7 9 0.00031 34.8 4.8 91 159-269 23-115 (358)
465 1lnq_A MTHK channels, potassiu 60.7 27 0.00093 30.6 7.9 88 158-267 115-209 (336)
466 3abi_A Putative uncharacterize 60.5 8.3 0.00028 34.7 4.5 66 157-237 15-84 (365)
467 1bg6_A N-(1-D-carboxylethyl)-L 60.4 20 0.00067 31.5 6.9 101 159-268 5-108 (359)
468 2km1_A Protein DRE2; yeast, an 60.0 4.2 0.00014 32.2 2.0 41 226-267 55-96 (136)
469 1yxm_A Pecra, peroxisomal tran 59.7 34 0.0012 29.1 8.2 79 158-239 18-109 (303)
470 3ew7_A LMO0794 protein; Q8Y8U8 59.6 30 0.001 27.6 7.5 96 160-269 2-102 (221)
471 1geg_A Acetoin reductase; SDR 59.2 22 0.00074 29.8 6.7 73 160-239 4-88 (256)
472 3gt0_A Pyrroline-5-carboxylate 58.4 5.4 0.00018 33.7 2.7 85 160-266 4-94 (247)
473 3gg2_A Sugar dehydrogenase, UD 58.4 26 0.0009 32.6 7.7 102 160-267 4-120 (450)
474 3o38_A Short chain dehydrogena 58.0 30 0.001 28.9 7.5 76 158-239 22-110 (266)
475 1zsy_A Mitochondrial 2-enoyl t 57.8 36 0.0012 30.1 8.2 96 155-268 165-269 (357)
476 2v6b_A L-LDH, L-lactate dehydr 57.4 82 0.0028 27.4 10.4 100 160-268 2-115 (304)
477 1g60_A Adenine-specific methyl 57.2 9.6 0.00033 32.6 4.2 21 248-268 53-73 (260)
478 1nff_A Putative oxidoreductase 57.0 35 0.0012 28.7 7.7 72 158-239 7-90 (260)
479 1cyd_A Carbonyl reductase; sho 56.5 79 0.0027 25.6 10.3 71 158-239 7-85 (244)
480 3pi7_A NADH oxidoreductase; gr 56.4 14 0.00046 32.8 5.1 89 159-268 166-262 (349)
481 3e8x_A Putative NAD-dependent 56.3 30 0.001 28.3 7.0 70 158-240 21-94 (236)
482 2gdz_A NAD+-dependent 15-hydro 56.3 47 0.0016 27.7 8.4 77 159-240 8-96 (267)
483 2pd4_A Enoyl-[acyl-carrier-pro 56.0 24 0.0008 29.9 6.5 74 158-239 6-93 (275)
484 3u5t_A 3-oxoacyl-[acyl-carrier 55.9 29 0.00098 29.5 7.0 105 158-270 27-162 (267)
485 3ado_A Lambda-crystallin; L-gu 55.7 16 0.00054 32.7 5.4 104 158-268 6-122 (319)
486 2cvz_A Dehydrogenase, 3-hydrox 55.5 31 0.0011 29.2 7.2 85 160-268 3-89 (289)
487 3ksu_A 3-oxoacyl-acyl carrier 55.4 37 0.0013 28.6 7.6 106 158-270 11-148 (262)
488 2hwk_A Helicase NSP2; rossman 55.4 6.6 0.00023 35.1 2.7 85 165-268 149-253 (320)
489 1iy8_A Levodione reductase; ox 55.0 32 0.0011 28.9 7.1 76 158-239 13-101 (267)
490 2pd6_A Estradiol 17-beta-dehyd 54.8 31 0.0011 28.6 7.0 65 159-224 8-75 (264)
491 3r3s_A Oxidoreductase; structu 54.4 30 0.001 29.7 7.0 106 158-270 49-186 (294)
492 3gvp_A Adenosylhomocysteinase 54.3 19 0.00064 33.9 5.8 87 157-268 219-306 (435)
493 3pwz_A Shikimate dehydrogenase 54.2 54 0.0018 28.4 8.5 94 157-268 119-214 (272)
494 4ezb_A Uncharacterized conserv 54.1 43 0.0015 29.3 8.1 87 159-269 25-121 (317)
495 4fs3_A Enoyl-[acyl-carrier-pro 53.8 31 0.0011 29.1 6.9 75 158-238 6-94 (256)
496 3asu_A Short-chain dehydrogena 53.8 94 0.0032 25.7 11.1 69 161-239 3-83 (248)
497 1xhl_A Short-chain dehydrogena 53.4 33 0.0011 29.5 7.1 78 158-239 26-115 (297)
498 2i6t_A Ubiquitin-conjugating e 53.1 35 0.0012 30.0 7.3 97 158-268 14-124 (303)
499 1lld_A L-lactate dehydrogenase 53.1 84 0.0029 27.0 9.7 101 158-268 7-123 (319)
500 4fgs_A Probable dehydrogenase 51.6 45 0.0015 28.9 7.6 124 130-270 8-160 (273)
No 1
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.94 E-value=7.9e-27 Score=204.11 Aligned_cols=187 Identities=39% Similarity=0.758 Sum_probs=151.3
Q ss_pred CCceeecccCCCCcccCCHHHHHHHHhcccccchhhhhHHHHHHHhhhhcchhhhhccccCCCCCcchhhhhHHHHHHHH
Q 024100 66 SSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQML 145 (272)
Q Consensus 66 ~~~~~~~g~~~~G~~~~~~~e~W~~~~~~~~~~~~~~~~~y~~~~~YW~~~~~~~~~~lggy~~~s~~d~~~s~~~L~~l 145 (272)
+..+.+.|.|++|+.|.+++++|++.+..... .....||....+||+.....++++++++...+..+......++..+
T Consensus 12 ~~~~~~~g~d~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 89 (254)
T 1xtp_A 12 SRNLPISGRDTNGKTYRSTDEMWKAELTGDLY--DPEKGWYGKALEYWRTVPATVSGVLGGMDHVHDVDIEGSRNFIASL 89 (254)
T ss_dssp -CCCCCCEEETTSCEESCHHHHHHHHSCSCTT--CTTTCHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHTS
T ss_pred cccccccccCCCCcccccHHHHHHHHHhcccc--ccchhhhhhhhhHHhcCCccccceecCcCccCHHHHHHHHHHHHhh
Confidence 45678999999999999999999998765322 1223599999999999998888888887765544444333333322
Q ss_pred HhccCCCccCCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC
Q 024100 146 LSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (272)
Q Consensus 146 l~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~ 225 (272)
...++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++.. ..+++++++|+.+++
T Consensus 90 --------~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 90 --------PGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG--------MPVGKFILASMETAT 153 (254)
T ss_dssp --------TTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT--------SSEEEEEESCGGGCC
T ss_pred --------cccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc--------CCceEEEEccHHHCC
Confidence 1346779999999999999988644466799999999999999998742 257999999999887
Q ss_pred CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+++++||+|++.++++|+++++...+|+++.++|+|||.+++.+.
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 766799999999999999887788999999999999999998764
No 2
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.90 E-value=1.8e-23 Score=182.58 Aligned_cols=160 Identities=43% Similarity=0.866 Sum_probs=131.9
Q ss_pred hhHHHHHHHhhhhcchhhhhccccCCCCCcchhhhhHHHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcCC
Q 024100 102 KTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN 181 (272)
Q Consensus 102 ~~~~y~~~~~YW~~~~~~~~~~lggy~~~s~~d~~~s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~ 181 (272)
...||+...+||+.....+++++++|..++..+......++..++.... ...++.+|||+|||+|.++..++.....
T Consensus 27 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~~~ 103 (241)
T 2ex4_A 27 EKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGP---NKTGTSCALDCGAGIGRITKRLLLPLFR 103 (241)
T ss_dssp HHHHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHGGGC-------CCCCSEEEEETCTTTHHHHHTTTTTCS
T ss_pred cchhHHHHHHHHhcCCccccccccCCCCcchhhHHhHHHHHHHHHHhcc---cCCCCCEEEEECCCCCHHHHHHHHhcCC
Confidence 4579999999999999988889888887777777777777777655321 1235779999999999999987544456
Q ss_pred cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEechhhhhcChhhHHHHHHHHHHhccc
Q 024100 182 EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIAR 261 (272)
Q Consensus 182 ~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~Lkp 261 (272)
+|+++|+|+.|++.|++++... ...+++++++|+.++++++++||+|++.++++|++++++..+|+++.++|+|
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 177 (241)
T 2ex4_A 104 EVDMVDITEDFLVQAKTYLGEE------GKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRP 177 (241)
T ss_dssp EEEEEESCHHHHHHHHHHTGGG------GGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred EEEEEeCCHHHHHHHHHHhhhc------CCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999987431 1347899999998887766789999999999999998888999999999999
Q ss_pred CcEEEEecC
Q 024100 262 SGTFLLSHS 270 (272)
Q Consensus 262 gG~liv~E~ 270 (272)
||.+++.+.
T Consensus 178 gG~l~i~~~ 186 (241)
T 2ex4_A 178 NGIIVIKDN 186 (241)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEEEc
Confidence 999998763
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.83 E-value=3.6e-20 Score=165.54 Aligned_cols=118 Identities=12% Similarity=0.242 Sum_probs=97.9
Q ss_pred HHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcC----CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceE
Q 024100 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF----NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATN 215 (272)
Q Consensus 140 ~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~----~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~ 215 (272)
..+..++.+.+ .++.+|||+|||+|.++..|+ +.+ .+|++||+|+.||+.|++++... ....+++
T Consensus 58 ~~i~~l~~~~~-----~~~~~vLDlGcGtG~~~~~la-~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~-----~~~~~v~ 126 (261)
T 4gek_A 58 SMIGMLAERFV-----QPGTQVYDLGCSLGAATLSVR-RNIHHDNCKIIAIDNSPAMIERCRRHIDAY-----KAPTPVD 126 (261)
T ss_dssp HHHHHHHHHHC-----CTTCEEEEETCTTTHHHHHHH-HTCCSSSCEEEEEESCHHHHHHHHHHHHTS-----CCSSCEE
T ss_pred HHHHHHHHHhC-----CCCCEEEEEeCCCCHHHHHHH-HhcCCCCCEEEEEECCHHHHHHHHHHHHhh-----ccCceEE
Confidence 33444544433 467899999999999999885 543 37999999999999999987543 2345899
Q ss_pred EEEeCCCCCCCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 216 FFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 216 ~~~~d~~~~~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
|+++|+.+++++ +||+|++++++||+++++...+|++++++|+|||.+++.|.
T Consensus 127 ~~~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 127 VIEGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EEESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Eeeccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 999999998764 69999999999999998888999999999999999998874
No 4
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.80 E-value=4.5e-19 Score=151.72 Aligned_cols=102 Identities=22% Similarity=0.272 Sum_probs=91.6
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+.+++++|+|+.|++.|++++. .+++++++|+.+++++ ++||+|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~d~~~~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKL-LLAGRTVYGIEPSREMRMIAKEKLP----------KEFSITEGDFLSFEVP-TSIDTIVS 112 (220)
T ss_dssp CCSEEEEECCTTSHHHHHH-HHTTCEEEEECSCHHHHHHHHHHSC----------TTCCEESCCSSSCCCC-SCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHH-HhCCCeEEEEeCCHHHHHHHHHhCC----------CceEEEeCChhhcCCC-CCeEEEEE
Confidence 5679999999999999988 4668899999999999999999862 4789999999998776 79999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+.+++|+++++...+|+++.++|+|||.+++.+.
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 9999999999866699999999999999998753
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.80 E-value=1.6e-19 Score=154.68 Aligned_cols=109 Identities=10% Similarity=-0.000 Sum_probs=89.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCC---C---CCCCCceEEEEeCCCCCCCCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM---A---PDMHKATNFFCVPLQDFTPET 228 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~---~---~~~~~~v~~~~~d~~~~~~~~ 228 (272)
+.++.+|||+|||+|..+..| ++.+.+|++||+|+.|++.|+++....... . .....+++|+++|+.++++.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~l-a~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWL-SGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHH-HHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred cCCCCEEEEeCCCCcHhHHHH-HHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 346779999999999999988 566779999999999999999885320000 0 001357999999999987654
Q ss_pred -CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcE
Q 024100 229 -GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGT 264 (272)
Q Consensus 229 -~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~ 264 (272)
++||+|++..+++|+++++...++++++++|+|||.
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 689999999999999988878899999999999998
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.79 E-value=4.7e-19 Score=149.99 Aligned_cols=100 Identities=22% Similarity=0.382 Sum_probs=89.8
Q ss_pred CCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEec
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~ 237 (272)
+.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|+++. .+++++++|+.++++++++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHL-ASLGHQIEGLEPATRLVELARQTH-----------PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHH-HHTTCCEEEECCCHHHHHHHHHHC-----------TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHH-HhcCCeEEEEeCCHHHHHHHHHhC-----------CCCeEEeCcccccccCCCCeEEEEeh
Confidence 569999999999999988 466779999999999999999874 36899999999887777899999999
Q ss_pred hhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 238 WCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 238 ~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.+++|++..+...+|+++.++|+|||.+++..
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999986677799999999999999998764
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.79 E-value=3.7e-19 Score=154.18 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=90.8
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.++++. ...+++++++|+.++++++++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~~~d~~~~~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKL-SRTGYKAVGVDISEVMIQKGKERG---------EGPDLSFIKGDLSSLPFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHH-HHTTCEEEEEESCHHHHHHHHTTT---------CBTTEEEEECBTTBCSSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHH-HHcCCeEEEEECCHHHHHHHHhhc---------ccCCceEEEcchhcCCCCCCCccEEE
Confidence 35679999999999999988 466889999999999999999875 24589999999999887778999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+..+++|+++.. .+++++.++|+|||.+++.+
T Consensus 122 ~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 122 AINSLEWTEEPL--RALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EESCTTSSSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EcChHhhccCHH--HHHHHHHHHhCCCeEEEEEE
Confidence 999999997776 99999999999999998765
No 8
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=2.5e-19 Score=159.88 Aligned_cols=96 Identities=21% Similarity=0.332 Sum_probs=84.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
...+|||||||+|.++..| ++.+.+|++||+|+.|++.|++ .+++++.++|++++++++++||+|++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l-~~~~~~v~gvD~s~~ml~~a~~------------~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGL-AEFFERVHAVDPGEAQIRQALR------------HPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHH-HTTCSEEEEEESCHHHHHTCCC------------CTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHH-HHhCCEEEEEeCcHHhhhhhhh------------cCCceeehhhhhhhcccCCcccEEEE
Confidence 4568999999999999977 6889999999999999987753 25799999999999988899999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..++||++ .+ +++++++|+|||||.|++.
T Consensus 106 ~~~~h~~~-~~--~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 106 AQAMHWFD-LD--RFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp CSCCTTCC-HH--HHHHHHHHHEEEEEEEEEE
T ss_pred eeehhHhh-HH--HHHHHHHHHcCCCCEEEEE
Confidence 99998874 44 7999999999999998764
No 9
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=6.1e-19 Score=155.18 Aligned_cols=106 Identities=16% Similarity=0.289 Sum_probs=92.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... ...++.|.++|++++++++++||+|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~l~~a~~~~~~~------~~~~v~~~~~d~~~l~~~~~~fD~V 107 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAF-APFVKKVVAFDLTEDILKVARAFIEGN------GHQQVEYVQGDAEQMPFTDERFHIV 107 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHH-GGGSSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCC-CCCSCTTCEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHH-HHhCCEEEEEeCCHHHHHHHHHHHHhc------CCCceEEEEecHHhCCCCCCCEEEE
Confidence 346779999999999999977 577789999999999999999887432 2357999999999988777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++.++||++|+. .+|++++++|+|||.+++.+
T Consensus 108 ~~~~~l~~~~d~~--~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 108 TCRIAAHHFPNPA--SFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EEhhhhHhcCCHH--HHHHHHHHHcCCCCEEEEEE
Confidence 9999999998876 99999999999999998864
No 10
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.79 E-value=5.8e-19 Score=152.47 Aligned_cols=99 Identities=23% Similarity=0.346 Sum_probs=88.3
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||||||+|.++..+ ++.+.+|+++|+|+.|++.|+++.. . +++++++|++++. ++++||+|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~~~~a~~~~~---------~-~v~~~~~d~~~~~-~~~~fD~v~~ 109 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRL-QEHFNDITCVEASEEAISHAQGRLK---------D-GITYIHSRFEDAQ-LPRRYDNIVL 109 (250)
T ss_dssp CSSCEEEESCTTSHHHHHH-TTTCSCEEEEESCHHHHHHHHHHSC---------S-CEEEEESCGGGCC-CSSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHH-HHhCCcEEEEeCCHHHHHHHHHhhh---------C-CeEEEEccHHHcC-cCCcccEEEE
Confidence 5568999999999999977 5778899999999999999999862 1 7899999998874 4579999999
Q ss_pred chhhhhcChhhHHHHHHHHH-HhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAK-ENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~-r~LkpgG~liv~E 269 (272)
..+++|+++++ .+|++++ ++|+|||.+++.+
T Consensus 110 ~~~l~~~~~~~--~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 110 THVLEHIDDPV--ALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ESCGGGCSSHH--HHHHHHHHTTEEEEEEEEEEE
T ss_pred hhHHHhhcCHH--HHHHHHHHHhcCCCCEEEEEc
Confidence 99999998876 9999999 9999999998765
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.79 E-value=2e-18 Score=154.71 Aligned_cols=108 Identities=18% Similarity=0.242 Sum_probs=93.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ....+++++++|+.++++++++||+|
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA-----GLADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH-----TCTTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc-----CCCcceEEEEcCcccCCCCCCCEeEE
Confidence 4567899999999999999885444669999999999999999886432 12357999999999988777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+++.. .+|++++++|+|||.+++.+
T Consensus 155 ~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 155 WSQDAFLHSPDKL--KVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EecchhhhcCCHH--HHHHHHHHHcCCCeEEEEEE
Confidence 9999999998865 99999999999999998875
No 12
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.79 E-value=1.2e-18 Score=154.93 Aligned_cols=111 Identities=13% Similarity=0.110 Sum_probs=90.7
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccC------CCCC-----CCCCceEEEEeCCCCC
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPEN------HMAP-----DMHKATNFFCVPLQDF 224 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~------~~~~-----~~~~~v~~~~~d~~~~ 224 (272)
.++.+|||+|||+|+.+..| ++.+.+|++||+|+.||+.|+++..... .... ....+++|+++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~L-a~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWF-ADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHH-HHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHH-HHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 35679999999999999977 5778899999999999999987653100 0000 0135799999999998
Q ss_pred CCCC-CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 225 TPET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 225 ~~~~-~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
++.+ ++||+|++..+|+|+++++...+++++.++|+|||.+++
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 7653 799999999999999988888999999999999999853
No 13
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.78 E-value=1.3e-18 Score=148.07 Aligned_cols=103 Identities=20% Similarity=0.335 Sum_probs=90.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.|++. ...+++++++|+.++ +++++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~v~~~D~s~~~~~~a~~~----------~~~~~~~~~~d~~~~-~~~~~~D~v 111 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLS-GLADRVTALDGSAEMIAEAGRH----------GLDNVEFRQQDLFDW-TPDRQWDAV 111 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHH-HHSSEEEEEESCHHHHHHHGGG----------CCTTEEEEECCTTSC-CCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHH-hcCCeEEEEeCCHHHHHHHHhc----------CCCCeEEEecccccC-CCCCceeEE
Confidence 3456799999999999999884 6678999999999999999872 235799999999988 456799999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++.+++|++++++..+|+++.++|+|||.+++.+
T Consensus 112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 99999999999877899999999999999998875
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.78 E-value=2.2e-18 Score=152.21 Aligned_cols=108 Identities=17% Similarity=0.241 Sum_probs=93.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ....++++.++|+.++++++++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAA-----GLANRVTFSYADAMDLPFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc-----CCCcceEEEECccccCCCCCCCccEE
Confidence 4577899999999999999886445779999999999999999987532 12347999999999988777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+++.. .+|+++.++|+|||.+++.+
T Consensus 134 ~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 134 WALESLHHMPDRG--RALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEESCTTTSSCHH--HHHHHHHTTEEEEEEEEEEE
T ss_pred EEechhhhCCCHH--HHHHHHHHHcCCCeEEEEEE
Confidence 9999999998776 99999999999999998875
No 15
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.77 E-value=1.2e-18 Score=148.47 Aligned_cols=99 Identities=18% Similarity=0.324 Sum_probs=88.3
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++ ++.+.++|+.+++ .+++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAM-LAAGFDVDATDGSPELAAEASRRL------------GRPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHH-HHTTCEEEEEESCHHHHHHHHHHH------------TSCCEECCGGGCC-CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHH-HHcCCeEEEECCCHHHHHHHHHhc------------CCceEEeeeccCC-CCCcEEEEE
Confidence 45779999999999999988 466789999999999999999875 4677889998887 557999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++.+++|+++++...+|+++.++|+|||.+++.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999999999777889999999999999999876
No 16
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.77 E-value=1.3e-18 Score=150.49 Aligned_cols=105 Identities=21% Similarity=0.364 Sum_probs=93.2
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.++.+|||+|||+|.++..++ +. ..+++++|+|+.|++.|++++.. ..+++++++|+.+++++ ++||+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~-~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~~~-~~fD~ 112 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLM-EKYPEATFTLVDMSEKMLEIAKNRFRG--------NLKVKYIEADYSKYDFE-EKYDM 112 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHH-HHCTTCEEEEEESCHHHHHHHHHHTCS--------CTTEEEEESCTTTCCCC-SCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHH-HhCCCCeEEEEECCHHHHHHHHHhhcc--------CCCEEEEeCchhccCCC-CCceE
Confidence 466899999999999999885 65 55999999999999999998743 23899999999998876 79999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
|+++.+++|+++++...++++++++|+|||.+++.+.
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999999999988877899999999999999998763
No 17
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=4.8e-18 Score=145.05 Aligned_cols=104 Identities=13% Similarity=0.219 Sum_probs=91.2
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++.. ..+++++++|+.+++ ++++||+|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~-~~~~fD~v~ 119 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKL-APHCKRLTVIDVMPRAIGRACQRTKR--------WSHISWAATDILQFS-TAELFDLIV 119 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHH-GGGEEEEEEEESCHHHHHHHHHHTTT--------CSSEEEEECCTTTCC-CSCCEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHH-HHcCCEEEEEECCHHHHHHHHHhccc--------CCCeEEEEcchhhCC-CCCCccEEE
Confidence 45679999999999999977 57778999999999999999998742 348999999999987 457999999
Q ss_pred echhhhhcCh-hhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTD-DDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d-~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++.+++|+++ +++..+|+++.++|+|||.+++..
T Consensus 120 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 120 VAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999999997 455689999999999999998753
No 18
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.77 E-value=3.7e-18 Score=149.39 Aligned_cols=107 Identities=19% Similarity=0.252 Sum_probs=94.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+|||+|.++..++.....+|+++|+|+.|++.|+++... ..+++++++|+.++++++++||+|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 124 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG--------NNKIIFEANDILTKEFPENNFDLI 124 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS--------CTTEEEEECCTTTCCCCTTCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc--------CCCeEEEECccccCCCCCCcEEEE
Confidence 567789999999999999988544477999999999999999998742 168999999999988777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|++.++...+|+++.++|+|||.+++.+
T Consensus 125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999999977777799999999999999998875
No 19
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.77 E-value=7.1e-18 Score=150.41 Aligned_cols=107 Identities=18% Similarity=0.234 Sum_probs=92.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||||||+|.++..++...+.+|+++|+|+.|++.|++++... ....++++.++|+.+++ ++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS-----ENLRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC-----CCCSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-----CCCCCeEEEECChhhCC---CCeeEE
Confidence 5677899999999999999886466779999999999999999987532 12357999999998774 689999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+++++...+|+++.++|+|||.+++.+
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999999977667799999999999999998765
No 20
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.77 E-value=1.2e-18 Score=163.67 Aligned_cols=219 Identities=18% Similarity=0.182 Sum_probs=142.5
Q ss_pred CCeeEEEeccchh--HHHHHHHHhhcCCCCCCCCCceeecccCCCCcccCCHHHHHHHHh---ccc-cc-chhh-hhHHH
Q 024100 35 KPTLHLLHVGRRK--EKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQI---GED-GE-QQEK-KTQWY 106 (272)
Q Consensus 35 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~~~e~W~~~~---~~~-~~-~~~~-~~~~y 106 (272)
...+-|+.+||+| ++++.++++|++.. ++ ++.|++.|.+++| ++..-+..- +.. .. +.+. +..|+
T Consensus 101 ~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l-~~-g~~i~~~g~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (381)
T 3dmg_A 101 AYDLVVLALPAGRGTAYVQASLVAAARAL-RM-GGRLYLAGDKNKG-----FERYFKEARALLGYGVVVRREGPYRVALL 173 (381)
T ss_dssp CEEEEEEECCGGGCHHHHHHHHHHHHHHE-EE-EEEEEEEEEGGGT-----HHHHHHHHHHHHSCEEEEEEETTEEEEEE
T ss_pred CCCEEEEECCcchhHHHHHHHHHHHHHhC-CC-CCEEEEEEccHHH-----HHHHHHHHHhhhccccccccccCcEEEEE
Confidence 3467788899887 67899999988743 22 7888999999999 666665542 210 00 1111 11222
Q ss_pred H------HHHhhhhcchhhhhc----cccCCCCCcchhhhhHHHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHH
Q 024100 107 R------EGISYWEGVEASVDG----VLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLL 176 (272)
Q Consensus 107 ~------~~~~YW~~~~~~~~~----~lggy~~~s~~d~~~s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LL 176 (272)
. .....|......+.+ +...-..++....+....++...+.+.+.. ...++.+|||+|||+|.++..++
T Consensus 174 ~~~~~~p~~~~~w~~~~~~~~g~~~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~-~~~~~~~VLDlGcG~G~~~~~la 252 (381)
T 3dmg_A 174 EKEKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGP-EGVRGRQVLDLGAGYGALTLPLA 252 (381)
T ss_dssp ECCSCCCCCCCCCEEEEEEETTEEEEEEECTTCTTTTSCCHHHHHHHHHHHHHHCT-TTTTTCEEEEETCTTSTTHHHHH
T ss_pred EccCCCCCCccccceeeEEecCceEEEEeCCCceeCCCCCHHHHHHHHHHHHhhcc-cCCCCCEEEEEeeeCCHHHHHHH
Confidence 1 113445433222111 000001122222222333333333322210 01356699999999999999884
Q ss_pred HhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEechhhhh---cChhhHHHHHH
Q 024100 177 IRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH---LTDDDFVSFFK 253 (272)
Q Consensus 177 a~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~vl~h---l~d~~~~~~l~ 253 (272)
+.+.+|+++|+|+.|++.|++++... ...++|+++|+.+..+++++||+|+++..+|| ....+...+++
T Consensus 253 -~~g~~V~gvDis~~al~~A~~n~~~~-------~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~ 324 (381)
T 3dmg_A 253 -RMGAEVVGVEDDLASVLSLQKGLEAN-------ALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVN 324 (381)
T ss_dssp -HTTCEEEEEESBHHHHHHHHHHHHHT-------TCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHH
T ss_pred -HcCCEEEEEECCHHHHHHHHHHHHHc-------CCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHH
Confidence 66789999999999999999987532 23489999999988765579999999999987 34455669999
Q ss_pred HHHHhcccCcEEEEec
Q 024100 254 RAKENIARSGTFLLSH 269 (272)
Q Consensus 254 ~~~r~LkpgG~liv~E 269 (272)
++.+.|+|||.++++-
T Consensus 325 ~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 325 VAAARLRPGGVFFLVS 340 (381)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHhcCcCcEEEEEE
Confidence 9999999999988753
No 21
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.76 E-value=7e-18 Score=144.55 Aligned_cols=112 Identities=17% Similarity=0.109 Sum_probs=91.6
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.++.+|||+|||+|.++..+ ++.+ .+|+++|+|+.|++.|++++...... .....+++++++|+...+...++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l-~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~ 105 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKIL-LKDSFFEQITGVDVSYRSLEIAQERLDRLRLP-RNQWERLQLIQGALTYQDKRFHGYDA 105 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHH-HHCTTCSEEEEEESCHHHHHHHHHHHTTCCCC-HHHHTTEEEEECCTTSCCGGGCSCSE
T ss_pred cCCCEEEEeCCCCCHHHHHH-HhhCCCCEEEEEECCHHHHHHHHHHHHHhcCC-cccCcceEEEeCCcccccccCCCcCE
Confidence 35679999999999999987 4655 49999999999999999987532100 00012799999999777665579999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|++..+++|+++++...+++++.++|+|||.++...
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 106 ATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 999999999998878899999999999999887764
No 22
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.76 E-value=5.7e-18 Score=147.67 Aligned_cols=106 Identities=16% Similarity=0.254 Sum_probs=93.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... ...++++.++|++++++++++||+|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAF-SPYVQECIGVDATKEMVEVASSFAQEK------GVENVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHH-GGGSSEEEEEESCHHHHHHHHHHHHHH------TCCSEEEEECBTTBCCSCTTCEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHH-HHhCCEEEEEECCHHHHHHHHHHHHHc------CCCCeEEEecccccCCCCCCcEEEE
Confidence 457789999999999999977 577889999999999999999887432 2347999999999988777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+++.. .+|+++.++|+|||.+++.+
T Consensus 92 ~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 92 TCRYAAHHFSDVR--KAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhccCHH--HHHHHHHHHcCCCcEEEEEE
Confidence 9999999998766 99999999999999998865
No 23
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.76 E-value=2.9e-18 Score=149.91 Aligned_cols=107 Identities=13% Similarity=0.048 Sum_probs=92.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ....+++|.++|+.++++ +++||+|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEEL-----GVSERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEESCCTTCCC-SSCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc-----CCCcceEEEECChHhCCc-CCCCCEE
Confidence 4567899999999999999885444669999999999999999987532 123579999999999876 6799999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+++.. .+|++++++|+|||.+++.+
T Consensus 108 ~~~~~~~~~~~~~--~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 108 ACVGATWIAGGFA--GAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEESCGGGTSSSH--HHHHHHTTSEEEEEEEEEEE
T ss_pred EECCChHhcCCHH--HHHHHHHHHcCCCeEEEEec
Confidence 9999999998776 99999999999999998875
No 24
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.76 E-value=7.3e-18 Score=147.50 Aligned_cols=101 Identities=19% Similarity=0.245 Sum_probs=90.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..++ +.+. +|+++|+|+.|++.|++++. ..+++++++|+.++++++++||+|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~-~~~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAA-EHGAKKVLGIDLSERMLTEAKRKTT---------SPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHCC---------CTTEEEEECCGGGCCCCTTCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHH-HcCCCEEEEEECCHHHHHHHHHhhc---------cCCeEEEEcchhhCCCCCCCeEEE
Confidence 467899999999999999884 6666 99999999999999999863 358999999999888767899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++..+++|+.+.. .+|++++++|+|||.+++.
T Consensus 113 ~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 113 LSSLALHYIASFD--DICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEE
T ss_pred EEchhhhhhhhHH--HHHHHHHHHcCCCcEEEEE
Confidence 9999999997665 9999999999999999875
No 25
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=9.9e-18 Score=143.60 Aligned_cols=112 Identities=18% Similarity=0.168 Sum_probs=91.6
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.++.+|||+|||+|.++..+ ++.+ .+|+++|+|+.|++.|++++...... .....+++++++|+...+..+++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l-~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~ 105 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLL-LKDKSFEQITGVDVSYSVLERAKDRLKIDRLP-EMQRKRISLFQSSLVYRDKRFSGYDA 105 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHH-HTSTTCCEEEEEESCHHHHHHHHHHHTGGGSC-HHHHTTEEEEECCSSSCCGGGTTCSE
T ss_pred cCCCEEEEecCCCCHHHHHH-HhcCCCCEEEEEECCHHHHHHHHHHHHhhccc-cccCcceEEEeCcccccccccCCCCE
Confidence 35679999999999999977 4665 59999999999999999987432100 00012799999999877766679999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|++..+++|++++++..+++++.+.|+|||.++...
T Consensus 106 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 106 ATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 999999999998888899999999999999877653
No 26
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=4.4e-18 Score=148.24 Aligned_cols=105 Identities=16% Similarity=0.112 Sum_probs=90.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-----C
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~ 229 (272)
+.++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++. ..+++|+++|+.+++... .
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~l-a~~~~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~ 123 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFL-SQFFPRVIGLDVSKSALEIAAKENT---------AANISYRLLDGLVPEQAAQIHSEI 123 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHH-HHHSSCEEEEESCHHHHHHHHHHSC---------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHH-HHhCCCEEEEECCHHHHHHHHHhCc---------ccCceEEECccccccccccccccc
Confidence 346679999999999999988 5777799999999999999999862 347999999998865321 2
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.||+|+++.++||+++.+...+|++++++|+|||.+++.+
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 4999999999999997777899999999999999988765
No 27
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.75 E-value=6.3e-18 Score=143.36 Aligned_cols=105 Identities=15% Similarity=0.173 Sum_probs=90.4
Q ss_pred CeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEech
Q 024100 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQW 238 (272)
Q Consensus 159 ~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~ 238 (272)
.+|||+|||+|.++..++.....+++++|+|+.|++.|++++... ....+++++++|+.++++++++||+|+++.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADA-----NLNDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhc-----cccCceEEEEcCHHHCCCCcccccEEEECc
Confidence 399999999999999885433559999999999999999987542 123579999999999887778999999999
Q ss_pred hhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 239 CIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 239 vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+++|+.+.. .+|+++.++|+|||.+++.+.
T Consensus 120 ~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 120 SVFFWEDVA--TAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp CGGGCSCHH--HHHHHHHHHEEEEEEEEEEEC
T ss_pred hHhhccCHH--HHHHHHHHhCCCCCEEEEEec
Confidence 999997666 999999999999999998753
No 28
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.75 E-value=5.2e-18 Score=150.31 Aligned_cols=117 Identities=23% Similarity=0.294 Sum_probs=97.5
Q ss_pred HHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE
Q 024100 141 FLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (272)
Q Consensus 141 ~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~ 218 (272)
.+..++.... .+.++.+|||+|||+|.++..++ +. ..+|+++|+|+.|++.|++++... ...++++++
T Consensus 24 ~l~~~l~~~~---~~~~~~~vLDiG~G~G~~~~~l~-~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~ 93 (276)
T 3mgg_A 24 TLEKLLHHDT---VYPPGAKVLEAGCGIGAQTVILA-KNNPDAEITSIDISPESLEKARENTEKN------GIKNVKFLQ 93 (276)
T ss_dssp HHHHHHHTTC---CCCTTCEEEETTCTTSHHHHHHH-HHCTTSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEE
T ss_pred HHHHHHhhcc---cCCCCCeEEEecCCCCHHHHHHH-HhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCcEEEE
Confidence 3445544332 24577899999999999999885 55 458999999999999999987532 235799999
Q ss_pred eCCCCCCCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 219 VPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 219 ~d~~~~~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.|+.++++++++||+|+++.+++|+++++ .+++++.++|+|||.+++.+
T Consensus 94 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 94 ANIFSLPFEDSSFDHIFVCFVLEHLQSPE--EALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp CCGGGCCSCTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCCCCCCCeeEEEEechhhhcCCHH--HHHHHHHHHcCCCcEEEEEE
Confidence 99998887778999999999999998887 99999999999999998865
No 29
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=7.6e-18 Score=142.73 Aligned_cols=107 Identities=14% Similarity=0.111 Sum_probs=92.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..++++.+.+|+++|+|+.|++.|++++... ..+++++++|+.++++++++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------NFKLNISKGDIRKLPFKDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH-------TCCCCEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEECchhhCCCCCCceeEEE
Confidence 456799999999999866565677779999999999999999886431 2468999999998877667999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+..+++|++.++...+++++.++|+|||.+++.+
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999999977777799999999999999998764
No 30
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.74 E-value=6.4e-18 Score=150.72 Aligned_cols=105 Identities=19% Similarity=0.269 Sum_probs=90.8
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CCCCcceeeE
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fDlIv 235 (272)
++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... ....+++++++|+.+++ +.+++||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKM-AERGHQVILCDLSAQMIDRAKQAAEAK-----GVSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHC------CCGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHH-HHCCCEEEEEECCHHHHHHHHHHHHhc-----CCCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 3569999999999999988 466889999999999999999987532 12368999999999886 4567999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+..+++|++++. .+|+++.++|+|||.+++..
T Consensus 142 ~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 142 FHAVLEWVADPR--SVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EESCGGGCSCHH--HHHHHHHHTEEEEEEEEEEE
T ss_pred ECchhhcccCHH--HHHHHHHHHcCCCeEEEEEE
Confidence 999999998776 99999999999999998754
No 31
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.74 E-value=3e-17 Score=148.77 Aligned_cols=107 Identities=20% Similarity=0.260 Sum_probs=91.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+|||+|.++..++...+.+|+++|+|+.|++.|++++... ....++++.++|+.+++ ++||+|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~---~~fD~v 159 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASI-----DTNRSRQVLLQGWEDFA---EPVDRI 159 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTS-----CCSSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCCCceEEEECChHHCC---CCcCEE
Confidence 4577899999999999999885443779999999999999999987532 12356999999998774 689999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+++++...+|+++.++|+|||.+++.+
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99999999987777799999999999999998765
No 32
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=1.6e-17 Score=143.72 Aligned_cols=102 Identities=17% Similarity=0.234 Sum_probs=89.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..++ +.+. +|+++|+|+.|++.|+++.. ..+++++++|+.++++++++||+|
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~-~~~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAH-EHGASYVLGLDLSEKMLARARAAGP---------DTGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHTSC---------SSSEEEEECCGGGCCCCTTCEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHH-HCCCCeEEEEcCCHHHHHHHHHhcc---------cCCceEEEcChhhccCCCCCceEE
Confidence 456799999999999999884 6666 99999999999999998863 237899999998887666799999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+++.. .+|+++.++|+|||.+++..
T Consensus 112 ~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 112 YSSLALHYVEDVA--RLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EEeccccccchHH--HHHHHHHHhcCcCcEEEEEe
Confidence 9999999997665 99999999999999998754
No 33
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.74 E-value=3.1e-17 Score=138.88 Aligned_cols=105 Identities=12% Similarity=0.107 Sum_probs=89.9
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..++ +.+. +|+++|+|+.|++.|+++... ..++++.++|+.++++++++||+|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~-~~~~~~v~~~D~s~~~~~~a~~~~~~--------~~~i~~~~~d~~~~~~~~~~fD~v 111 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELF-LGGFPNVTSVDYSSVVVAAMQACYAH--------VPQLRWETMDVRKLDFPSASFDVV 111 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHH-HTTCCCEEEEESCHHHHHHHHHHTTT--------CTTCEEEECCTTSCCSCSSCEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHH-HcCCCcEEEEeCCHHHHHHHHHhccc--------CCCcEEEEcchhcCCCCCCcccEE
Confidence 456799999999999999885 5554 999999999999999998742 357899999999887666799999
Q ss_pred EechhhhhcC-------------hhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLT-------------DDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~-------------d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++.+++|+. ..+...+++++.++|+|||.+++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 9999998876 3455699999999999999998765
No 34
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.74 E-value=4e-17 Score=147.02 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=91.0
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||||||+|.++..++.....+|+++|+|+.|++.|++++... ....++++.++|+.++ +++||+|
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~---~~~fD~v 141 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV-----DSPRRKEVRIQGWEEF---DEPVDRI 141 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS-----CCSSCEEEEECCGGGC---CCCCSEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-----CCCCceEEEECCHHHc---CCCccEE
Confidence 4677899999999999999885443789999999999999999987542 1234799999999887 4699999
Q ss_pred EechhhhhcChh-------hHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDD-------DFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~-------~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|++++ ++..+|+++.++|+|||.+++.+
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999999999663 45699999999999999998765
No 35
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=4e-17 Score=139.77 Aligned_cols=105 Identities=20% Similarity=0.246 Sum_probs=90.1
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+++++++|+|+.|++.|++++.. ...+++++++|+.++++++++||+|++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLL-EDYGFEVVGVDISEDMIRKAREYAKS-------RESNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHH-HHcCCEEEEEECCHHHHHHHHHHHHh-------cCCCceEEECchhcCCCCCCcEEEEEE
Confidence 4679999999999999977 57788999999999999999998743 125789999999988766679999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+.++++...++...+++++.++|+|||.+++.+
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 999666656666799999999999999998764
No 36
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.74 E-value=1.4e-17 Score=139.71 Aligned_cols=105 Identities=18% Similarity=0.143 Sum_probs=91.2
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..++ +.+.+++++|+|+.|++.|++++... ...+++++++|+.++++ +++||+|++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~~~-~~~~D~v~~ 103 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLA-ANGYDVDAWDKNAMSIANVERIKSIE------NLDNLHTRVVDLNNLTF-DRQYDFILS 103 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEECCGGGCCC-CCCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHH-HCCCeEEEEECCHHHHHHHHHHHHhC------CCCCcEEEEcchhhCCC-CCCceEEEE
Confidence 56699999999999999884 66779999999999999999887432 23469999999988876 679999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+.+++|++.++...+++++.++|+|||.+++.+
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 999999987777899999999999999987654
No 37
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.74 E-value=1.6e-17 Score=145.31 Aligned_cols=106 Identities=14% Similarity=0.225 Sum_probs=90.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
+.++.+|||+|||+|.++..++ +.++ +|+++|+|+.|++.|++++... ....+++++++|+.++++++++||+
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~-~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~fD~ 117 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLA-DYVKGQITGIDLFPDFIEIFNENAVKA-----NCADRVKGITGSMDNLPFQNEELDL 117 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHH-HHCCSEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEECCTTSCSSCTTCEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHH-HhCCCeEEEEECCHHHHHHHHHHHHHc-----CCCCceEEEECChhhCCCCCCCEEE
Confidence 4567799999999999999885 6555 9999999999999999987542 1234599999999998877789999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+++.+++|+ +.. .+++++.++|+|||.+++.+
T Consensus 118 v~~~~~l~~~-~~~--~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 118 IWSEGAIYNI-GFE--RGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEEESCSCCC-CHH--HHHHHHHTTEEEEEEEEEEE
T ss_pred EEecChHhhc-CHH--HHHHHHHHHcCCCcEEEEEE
Confidence 9999999998 444 89999999999999998876
No 38
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.73 E-value=1.6e-17 Score=145.39 Aligned_cols=104 Identities=16% Similarity=0.167 Sum_probs=91.4
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.|++++. ....++++.++|++++++++++||+|
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLI-ARGYRYIALDADAAMLEVFRQKIA-------GVDRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHH-TTTCEEEEEESCHHHHHHHHHHTT-------TSCTTEEEEESCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhh-------ccCCceEEEEcccccCCCCCCCeeEE
Confidence 4567799999999999999884 668899999999999999999862 13468999999999988777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+++.++||+++.. .+++++.++|+|||.+++.
T Consensus 109 ~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVPDWP--KVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCTTHH--HHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcCCHH--HHHHHHHHHCCCCcEEEEE
Confidence 9999999998766 9999999999999998764
No 39
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.73 E-value=3e-17 Score=144.57 Aligned_cols=99 Identities=21% Similarity=0.346 Sum_probs=88.6
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++ .+++++++|+.++++ +++||+|++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHL-ADSFGTVEGLELSADMLAIARRRN-----------PDAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TCCEEEEETCTTSHHHHHH-TTTSSEEEEEESCHHHHHHHHHHC-----------TTSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCcEEEeCCcCCHHHHHH-HHcCCeEEEEECCHHHHHHHHhhC-----------CCCEEEECChHHCCc-cCCcCEEEE
Confidence 4579999999999999977 577889999999999999999975 268999999999876 579999999
Q ss_pred ch-hhhhcCh-hhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QW-CIGHLTD-DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~-vl~hl~d-~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.. +++|+.+ .+...+|+++.++|+|||.+++.
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 98 9999976 46679999999999999999885
No 40
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.73 E-value=2.8e-17 Score=149.08 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=91.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+|||+|.++..++...+.+|+++|+|+.|++.|++++... ....+++|+++|+.++++++++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL-----RIDDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-----CCCCceEEEECChhcCCCCCCCEeEE
Confidence 4567899999999999999885333789999999999999999987542 12347999999999988777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+ + ...+|+++.++|+|||.+++.+
T Consensus 190 ~~~~~l~~~-~--~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 190 WNNESTMYV-D--LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEESCGGGS-C--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhC-C--HHHHHHHHHHHcCCCcEEEEEE
Confidence 999999999 4 4599999999999999998765
No 41
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.73 E-value=1.3e-17 Score=147.28 Aligned_cols=106 Identities=17% Similarity=0.238 Sum_probs=91.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
+.++.+|||+|||+|.++..++ +.. .+|+++|+|+.|++.|++++... ....+++++++|+.++++++++||+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la-~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~fD~ 117 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLA-GHVTGQVTGLDFLSGFIDIFNRNARQS-----GLQNRVTGIVGSMDDLPFRNEELDL 117 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHH-TTCSSEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEECCTTSCCCCTTCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHH-hccCCEEEEEeCCHHHHHHHHHHHHHc-----CCCcCcEEEEcChhhCCCCCCCEEE
Confidence 4567899999999999999885 554 49999999999999999987542 1235799999999998877789999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|++..+++|+ +.. .+|+++.++|+|||.+++.+
T Consensus 118 i~~~~~~~~~-~~~--~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 118 IWSEGAIYNI-GFE--RGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp EEESSCGGGT-CHH--HHHHHHGGGEEEEEEEEEEE
T ss_pred EEEcCCceec-CHH--HHHHHHHHHcCCCCEEEEEE
Confidence 9999999998 444 89999999999999998875
No 42
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.73 E-value=9.4e-18 Score=143.36 Aligned_cols=106 Identities=14% Similarity=0.180 Sum_probs=91.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC---CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~---~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|.++..++ +.+ .+|+++|+|+.|++.|++++... ...+++++++|+.++++++++|
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~-~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~~~d~~~~~~~~~~f 107 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLS-KMVGEKGKVYAIDVQEEMVNYAWEKVNKL------GLKNVEVLKSEENKIPLPDNTV 107 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHH-HHHTTTCEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEECBTTBCSSCSSCE
T ss_pred CCCCCEEEEEecCCCHHHHHHH-HHhCCCcEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEecccccCCCCCCCe
Confidence 3567799999999999999885 554 68999999999999999987432 2347999999999988777899
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|+++.+++|+++.. .+++++.+.|+|||.+++.+
T Consensus 108 D~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 108 DFIFMAFTFHELSEPL--KFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEEEEESCGGGCSSHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEeehhhhhcCCHH--HHHHHHHHHhCCCeEEEEEE
Confidence 9999999999997766 99999999999999998875
No 43
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.73 E-value=2.3e-17 Score=140.34 Aligned_cols=97 Identities=14% Similarity=0.216 Sum_probs=85.6
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ...+++++|+|+.|++.|+++. .+++++++|+.++++++++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----------PEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----------TTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcccccCCCCCCcEEEEEE
Confidence 5679999999999999855 2348999999999999999875 3678999999988877779999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
..+++|+++.. .+++++.++|+|||.+++..
T Consensus 102 ~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 102 FTTLEFVEDVE--RVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp ESCTTTCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred cChhhhcCCHH--HHHHHHHHHcCCCCEEEEEe
Confidence 99999998766 99999999999999998764
No 44
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=1.9e-17 Score=144.81 Aligned_cols=100 Identities=18% Similarity=0.272 Sum_probs=88.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..++.+|||+|||+|.++..++ +. ..+|+++|+|+.|++.++++. .+++++++|+++++ ++++||
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~-~~~~fD 97 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLT-DRYGVNVITGIDSDDDMLEKAADRL-----------PNTNFGKADLATWK-PAQKAD 97 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHH-HHHCTTSEEEEESCHHHHHHHHHHS-----------TTSEEEECCTTTCC-CSSCEE
T ss_pred CCCCCEEEEecCcCCHHHHHHH-HhCCCCEEEEEECCHHHHHHHHHhC-----------CCcEEEECChhhcC-ccCCcC
Confidence 3567799999999999999885 55 679999999999999999873 36899999999887 557999
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|+++.++||+++.. .+|+++.++|+|||.+++..
T Consensus 98 ~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 98 LLYANAVFQWVPDHL--AVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEEEESCGGGSTTHH--HHHHHHGGGEEEEEEEEEEE
T ss_pred EEEEeCchhhCCCHH--HHHHHHHHhcCCCeEEEEEe
Confidence 999999999997766 99999999999999998764
No 45
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=2e-17 Score=147.20 Aligned_cols=99 Identities=15% Similarity=0.271 Sum_probs=88.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.|++++ .++.+.++|++++++ +++||+|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~-~~~fD~v~ 122 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIA-QSGAEVLGTDNAATMIEKARQNY-----------PHLHFDVADARNFRV-DKPLDAVF 122 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHC-----------TTSCEEECCTTTCCC-SSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHH-hCCCeEEEEECCHHHHHHHHhhC-----------CCCEEEECChhhCCc-CCCcCEEE
Confidence 456799999999999999885 67789999999999999999875 368899999999876 47999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++.+++|++++. .+|++++++|+|||.+++..
T Consensus 123 ~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 123 SNAMLHWVKEPE--AAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhhCcCHH--HHHHHHHHhcCCCcEEEEEe
Confidence 999999998777 99999999999999998753
No 46
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=1.3e-17 Score=147.47 Aligned_cols=99 Identities=19% Similarity=0.169 Sum_probs=86.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|+++ .+++|+++|++++++++++||+|
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~~~~a~~~------------~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVAL-ANQGLFVYAVEPSIVMRQQAVVH------------PQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHH-HTTTCEEEEECSCHHHHHSSCCC------------TTEEEECCCTTSCCSCTTCBSEE
T ss_pred CCCCCEEEEEcCcccHHHHHH-HhCCCEEEEEeCCHHHHHHHHhc------------cCCEEEECchhhCCCCCCCEeEE
Confidence 356789999999999999988 46778999999999999887653 17999999999988777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++.++++|+++.. .++++++++|+ ||.+++.+
T Consensus 99 ~~~~~l~~~~~~~--~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 99 ISILAIHHFSHLE--KSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEESCGGGCSSHH--HHHHHHHHHBC-SSCEEEEE
T ss_pred EEcchHhhccCHH--HHHHHHHHHhC-CcEEEEEE
Confidence 9999999997766 99999999999 99776654
No 47
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.72 E-value=4.2e-17 Score=145.99 Aligned_cols=105 Identities=14% Similarity=0.257 Sum_probs=91.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
+.++.+|||+|||+|.++..+ ++. ..+|+++|+|+.|++.|++++.. ...+++|.++|+.+++++ ++|
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l-~~~~~~~~~v~gvD~s~~~~~~a~~~~~~-------~~~~v~~~~~d~~~~~~~-~~f 90 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVL-MPLLPEGSKYTGIDSGETLLAEARELFRL-------LPYDSEFLEGDATEIELN-DKY 90 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHH-TTTSCTTCEEEEEESCHHHHHHHHHHHHS-------SSSEEEEEESCTTTCCCS-SCE
T ss_pred cCCCCeEEEecCCCCHHHHHH-HHhCCCCCEEEEEECCHHHHHHHHHHHHh-------cCCceEEEEcchhhcCcC-CCe
Confidence 456789999999999999988 465 35899999999999999998743 234899999999998764 699
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
|+|++..+++|+++.. .++++++++|+|||.+++.+.
T Consensus 91 D~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 91 DIAICHAFLLHMTTPE--TMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp EEEEEESCGGGCSSHH--HHHHHHHHTEEEEEEEEEEEC
T ss_pred eEEEECChhhcCCCHH--HHHHHHHHHcCCCCEEEEEec
Confidence 9999999999998877 999999999999999998763
No 48
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.72 E-value=6.7e-17 Score=138.65 Aligned_cols=112 Identities=14% Similarity=0.115 Sum_probs=93.4
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.|++++...... .....++++.++|+.++++++++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELA-SKGYSVTGIDINSEAIRLAETAARSPGLN-QKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTTCCSCC-SSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHhcCCc-cccCcceEEEEecccccCCCCCceeEEE
Confidence 356799999999999999884 66789999999999999999987542110 0112478999999999887778999999
Q ss_pred echhhhhcChhh-HHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDD-FVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~-~~~~l~~~~r~LkpgG~liv~E 269 (272)
++.+++|+++++ ...+++++.++|+|||.+++.+
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 999999998754 6689999999999999998864
No 49
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.72 E-value=4.4e-17 Score=140.59 Aligned_cols=100 Identities=17% Similarity=0.281 Sum_probs=87.0
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..++ +.+.+++++|+|+.|++.|++++ .+++++++|+.++++ +++||+|+|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFT-KEFGDTAGLELSEDMLTHARKRL-----------PDATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHH-HHHSEEEEEESCHHHHHHHHHHC-----------TTCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHH-HhCCcEEEEeCCHHHHHHHHHhC-----------CCCEEEECCHHHccc-CCCCcEEEE
Confidence 56799999999999999884 66779999999999999999875 358999999998876 569999996
Q ss_pred c-hhhhhcCh-hhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 Q-WCIGHLTD-DDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~-~vl~hl~d-~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
. .+++|+.+ ++...+|+++.++|+|||.+++.+
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 4 59999965 567799999999999999998864
No 50
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.72 E-value=1.9e-17 Score=143.42 Aligned_cols=106 Identities=16% Similarity=0.077 Sum_probs=91.6
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... ....+++|+++|+.++++. ++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAM-ASPERFVVGLDISESALAKANETYGSS-----PKAEYFSFVKEDVFTWRPT-ELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHH-CBTTEEEEEECSCHHHHHHHHHHHTTS-----GGGGGEEEECCCTTTCCCS-SCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHH-HhCCCeEEEEECCHHHHHHHHHHhhcc-----CCCcceEEEECchhcCCCC-CCeeEEEE
Confidence 3469999999999999977 577789999999999999999987531 1235799999999998754 59999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+.+++|+++++...+++++.++|+|||.+++.+
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 999999997777799999999999999998754
No 51
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.71 E-value=3.1e-17 Score=146.33 Aligned_cols=104 Identities=19% Similarity=0.138 Sum_probs=91.5
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... ..+++++++|+.++++ +++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l-~~~g~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYL-SLLGYDVTSWDHNENSIAFLNETKEKE-------NLNISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCGGGCCC-CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHH-HHCCCeEEEEECCHHHHHHHHHHHHHc-------CCceEEEEeccccccc-cCCccEEEE
Confidence 5679999999999999988 466779999999999999999987532 2279999999998876 579999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+.+++|+++++...+++++.+.|+|||.+++..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999999998888899999999999999976653
No 52
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.71 E-value=2e-17 Score=143.96 Aligned_cols=100 Identities=11% Similarity=0.087 Sum_probs=86.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC--CCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD 232 (272)
+.++.+|||||||+|.++..+ ++.+.+|+++|+|+.|++.|+++ ++++++|+.++ ++++++||
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~~~~a~~~--------------~~~~~~d~~~~~~~~~~~~fD 103 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELC-KEEGIESIGVDINEDMIKFCEGK--------------FNVVKSDAIEYLKSLPDKYLD 103 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHH-HHHTCCEEEECSCHHHHHHHHTT--------------SEEECSCHHHHHHTSCTTCBS
T ss_pred hcCCCeEEEEeCCCCHHHHHH-HhCCCcEEEEECCHHHHHHHHhh--------------cceeeccHHHHhhhcCCCCee
Confidence 345679999999999999977 56678999999999999999863 57788887765 55567999
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|++..+++|++++++..+|+++.++|+|||.+++..
T Consensus 104 ~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 104 GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 9999999999998888899999999999999988754
No 53
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.71 E-value=9.2e-18 Score=149.93 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=95.4
Q ss_pred HHHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE
Q 024100 138 SEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF 217 (272)
Q Consensus 138 s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~ 217 (272)
...++..++. ..++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|+++...... .....++.+.
T Consensus 45 ~~~~l~~~l~-------~~~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~~~ 114 (293)
T 3thr_A 45 YKAWLLGLLR-------QHGCHRVLDVACGTGVDSIML-VEEGFSVTSVDASDKMLKYALKERWNRRK--EPAFDKWVIE 114 (293)
T ss_dssp HHHHHHHHHH-------HTTCCEEEETTCTTSHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHHTTT--SHHHHTCEEE
T ss_pred HHHHHHHHhc-------ccCCCEEEEecCCCCHHHHHH-HHCCCeEEEEECCHHHHHHHHHhhhhccc--ccccceeeEe
Confidence 3445555544 235679999999999999988 47777999999999999999887522100 0112467899
Q ss_pred EeCCCCCC---CCCCcceeeEec-hhhhhcCh-----hhHHHHHHHHHHhcccCcEEEEec
Q 024100 218 CVPLQDFT---PETGRYDVIWVQ-WCIGHLTD-----DDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 218 ~~d~~~~~---~~~~~fDlIvs~-~vl~hl~d-----~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++|+.+++ +.+++||+|++. .+++|+++ .+...+|++++++|+|||.+++..
T Consensus 115 ~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 115 EANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp ECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 99988765 556799999998 89999998 556699999999999999998653
No 54
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=8.6e-17 Score=140.37 Aligned_cols=117 Identities=18% Similarity=0.244 Sum_probs=94.0
Q ss_pred HHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE
Q 024100 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (272)
Q Consensus 139 ~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~ 218 (272)
..++..++.... ..++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... ..++++++
T Consensus 27 ~~~~~~~~~~~~----~~~~~~vLDlGcG~G~~~~~l-~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~ 94 (252)
T 1wzn_A 27 IDFVEEIFKEDA----KREVRRVLDLACGTGIPTLEL-AERGYEVVGLDLHEEMLRVARRKAKER-------NLKIEFLQ 94 (252)
T ss_dssp HHHHHHHHHHTC----SSCCCEEEEETCTTCHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHHT-------TCCCEEEE
T ss_pred HHHHHHHHHHhc----ccCCCEEEEeCCCCCHHHHHH-HHCCCeEEEEECCHHHHHHHHHHHHhc-------CCceEEEE
Confidence 455666665332 245679999999999999988 466789999999999999999987431 23689999
Q ss_pred eCCCCCCCCCCcceeeEec-hhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 219 VPLQDFTPETGRYDVIWVQ-WCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 219 ~d~~~~~~~~~~fDlIvs~-~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+.+++++ ++||+|++. .+++|++.++...+|+++.++|+|||.+++.
T Consensus 95 ~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 95 GDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 999887754 689999987 4566777777889999999999999998753
No 55
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.71 E-value=1.5e-17 Score=149.43 Aligned_cols=107 Identities=17% Similarity=0.258 Sum_probs=80.4
Q ss_pred CCCCeeeEeecccchHHHHHHH---hcCCcE----EEEeCCHHHHHHHHHhccccCCCCCCCCCceEE--EEeCCCCCC-
Q 024100 156 NQHLVALDCGSGIGRITKNLLI---RYFNEV----DLLEPVSHFLDAARESLAPENHMAPDMHKATNF--FCVPLQDFT- 225 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa---~~~~~v----~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~--~~~d~~~~~- 225 (272)
.++.+|||||||+|.++..++. ..++.+ +++|+|+.|++.|++++... ....++.+ .++++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~-----~~~~~v~~~~~~~~~~~~~~ 125 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT-----SNLENVKFAWHKETSSEYQS 125 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC-----SSCTTEEEEEECSCHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc-----cCCCcceEEEEecchhhhhh
Confidence 4567999999999987764432 233433 99999999999999987421 11234444 455554443
Q ss_pred -----CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 226 -----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 226 -----~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++++||+|++++++||++|++ ++|++++++|||||.+++.+
T Consensus 126 ~~~~~~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 126 RMLEKKELQKWDFIHMIQMLYYVKDIP--ATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HHHTTTCCCCEEEEEEESCGGGCSCHH--HHHHHHHHTEEEEEEEEEEE
T ss_pred hhccccCCCceeEEEEeeeeeecCCHH--HHHHHHHHHcCCCcEEEEEE
Confidence 3457999999999999998887 99999999999999998753
No 56
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.70 E-value=1.4e-16 Score=141.85 Aligned_cols=108 Identities=16% Similarity=0.070 Sum_probs=89.8
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-CCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fDl 233 (272)
.++.+|||+|||+|.++..++ +.. .+|+++|+|+.|++.|++++... ....+++++++|+.+.++ .+++||+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~-~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~fD~ 136 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYE-RAGIGEYYGVDIAEVSINDARVRARNM-----KRRFKVFFRAQDSYGRHMDLGKEFDV 136 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHH-HHTCSEEEEEESCHHHHHHHHHHHHTS-----CCSSEEEEEESCTTTSCCCCSSCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHhc-----CCCccEEEEECCccccccCCCCCcCE
Confidence 466799999999999999874 544 49999999999999999987532 122478999999998765 4579999
Q ss_pred eEechhhhh--cChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGH--LTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~h--l~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|++..++|| .+.++...+|+++.++|+|||.+++..
T Consensus 137 v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 137 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999988 445667799999999999999998753
No 57
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.70 E-value=4.2e-17 Score=150.50 Aligned_cols=210 Identities=16% Similarity=0.192 Sum_probs=132.3
Q ss_pred CCeeEEEeccchhHHHHHHHHhhcCCCCCCCCCceeecccCCCCcccCCHHHHHHHHhccccc---chhhhhHHHH----
Q 024100 35 KPTLHLLHVGRRKEKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQIGEDGE---QQEKKTQWYR---- 107 (272)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~~~e~W~~~~~~~~~---~~~~~~~~y~---- 107 (272)
...+-++.+||.|++++.+++++++.. .| ++.+.+.|....| ..++.++... +..... ..++...|..
T Consensus 76 ~~~~~~~~~pk~~~~~~~~l~~~~~~~-~~-~~~~~~~g~~~~~--~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~ 150 (343)
T 2pjd_A 76 DCDTLIYYWPKNKPEAQFQLMNLLSLL-PV-GTDIFVVGENRSG--VRSAEQMLAD-YAPLNKVDSARRCGLYFGRLEKQ 150 (343)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHHHTTS-CT-TCEEEEEEEGGGT--GGGHHHHHTT-TSCCEEECCCTTEEEEEEECCSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHHhC-CC-CCEEEEEEecCCC--HHhHHHHHHH-hcCcchhhhhhcceeEEeecccC
Confidence 457889999999999999999999854 23 6677888888877 2234333322 221000 0111111110
Q ss_pred ---HHHhhhhcchh---hhhccccCCCCCcchhhhhHHHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcC-
Q 024100 108 ---EGISYWEGVEA---SVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF- 180 (272)
Q Consensus 108 ---~~~~YW~~~~~---~~~~~lggy~~~s~~d~~~s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~- 180 (272)
....||..-.. .+. ...|. ++....+....++...+. ..++.+|||+|||+|.++..++ +.+
T Consensus 151 ~~~~~~~~~~~y~~~~~~~~-~~~gv--f~~~~~d~~~~~ll~~l~-------~~~~~~VLDlGcG~G~~~~~la-~~~~ 219 (343)
T 2pjd_A 151 PVFDAEKFWGEYSVDGLTVK-TLPGV--FSRDGLDVGSQLLLSTLT-------PHTKGKVLDVGCGAGVLSVAFA-RHSP 219 (343)
T ss_dssp CCCCGGGGCEEEEETTEEEE-ECTTC--TTSSSCCHHHHHHHHHSC-------TTCCSBCCBTTCTTSHHHHHHH-HHCT
T ss_pred CCCCchhhcceeeccceEEE-ecCCc--cCCCCCcHHHHHHHHhcC-------cCCCCeEEEecCccCHHHHHHH-HHCC
Confidence 01223322110 000 00111 111222222333333321 1245699999999999999885 555
Q ss_pred -CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEechhhhhc---ChhhHHHHHHHHH
Q 024100 181 -NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHL---TDDDFVSFFKRAK 256 (272)
Q Consensus 181 -~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~vl~hl---~d~~~~~~l~~~~ 256 (272)
.+|+++|+|+.|++.|++++... ...++++++|+.++. +++||+|+++.++|+. ...+...+++++.
T Consensus 220 ~~~v~~vD~s~~~l~~a~~~~~~~-------~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~ 290 (343)
T 2pjd_A 220 KIRLTLCDVSAPAVEASRATLAAN-------GVEGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAV 290 (343)
T ss_dssp TCBCEEEESBHHHHHHHHHHHHHT-------TCCCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHG
T ss_pred CCEEEEEECCHHHHHHHHHHHHHh-------CCCCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHH
Confidence 38999999999999999987531 224678899987754 4689999999998752 3345669999999
Q ss_pred HhcccCcEEEEec
Q 024100 257 ENIARSGTFLLSH 269 (272)
Q Consensus 257 r~LkpgG~liv~E 269 (272)
++|+|||.+++..
T Consensus 291 ~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 291 RHLNSGGELRIVA 303 (343)
T ss_dssp GGEEEEEEEEEEE
T ss_pred HhCCCCcEEEEEE
Confidence 9999999988764
No 58
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.70 E-value=5e-17 Score=146.22 Aligned_cols=105 Identities=21% Similarity=0.287 Sum_probs=89.6
Q ss_pred CCCCeeeEeecccchHHHHHHH--hcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-----
Q 024100 156 NQHLVALDCGSGIGRITKNLLI--RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET----- 228 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa--~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~----- 228 (272)
.++.+|||+|||+|.++..++. ..+.+|+++|+|+.|++.|++++... .....+++|+++|++++++..
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~~~~v~~~~~d~~~~~~~~~~~~~ 110 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS----PDTYKNVSFKISSSDDFKFLGADSVD 110 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC----C-CCTTEEEEECCTTCCGGGCTTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc----cCCCCceEEEEcCHHhCCcccccccc
Confidence 3677999999999999998853 35779999999999999999987431 012468999999999987665
Q ss_pred -CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 229 -GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 229 -~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
++||+|+++.++||+ +.. .+++++.++|+|||.+++
T Consensus 111 ~~~fD~V~~~~~l~~~-~~~--~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 111 KQKIDMITAVECAHWF-DFE--KFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SSCEEEEEEESCGGGS-CHH--HHHHHHHHHEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHh-CHH--HHHHHHHHhcCCCcEEEE
Confidence 799999999999999 555 999999999999999987
No 59
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.70 E-value=6.7e-17 Score=139.59 Aligned_cols=115 Identities=19% Similarity=0.343 Sum_probs=94.2
Q ss_pred HHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE
Q 024100 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (272)
Q Consensus 139 ~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~ 218 (272)
..++..++... ..++.+|||+|||+|.++..+ ++.+.+++++|+|+.|++.|++++... ..++++++
T Consensus 24 ~~~~~~~l~~~-----~~~~~~vLdiG~G~G~~~~~l-~~~~~~~~~~D~s~~~~~~a~~~~~~~-------~~~~~~~~ 90 (246)
T 1y8c_A 24 SDFIIEKCVEN-----NLVFDDYLDLACGTGNLTENL-CPKFKNTWAVDLSQEMLSEAENKFRSQ-------GLKPRLAC 90 (246)
T ss_dssp HHHHHHHHHTT-----TCCTTEEEEETCTTSTTHHHH-GGGSSEEEEECSCHHHHHHHHHHHHHT-------TCCCEEEC
T ss_pred HHHHHHHHHHh-----CCCCCeEEEeCCCCCHHHHHH-HHCCCcEEEEECCHHHHHHHHHHHhhc-------CCCeEEEe
Confidence 34455555422 125679999999999999977 577789999999999999999987431 22789999
Q ss_pred eCCCCCCCCCCcceeeEech-hhhhcCh-hhHHHHHHHHHHhcccCcEEEE
Q 024100 219 VPLQDFTPETGRYDVIWVQW-CIGHLTD-DDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 219 ~d~~~~~~~~~~fDlIvs~~-vl~hl~d-~~~~~~l~~~~r~LkpgG~liv 267 (272)
+|+.+++++ ++||+|++.. +++|+++ ++...+|++++++|+|||.+++
T Consensus 91 ~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 91 QDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999888765 7999999998 9999954 5677999999999999999886
No 60
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.70 E-value=6.1e-17 Score=144.95 Aligned_cols=100 Identities=17% Similarity=0.141 Sum_probs=82.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----CCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----ETG 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~ 229 (272)
+.++.+|||+|||+|.++..| ++.+.+|+++|+|+.|++.|++++.. . +++.++.+++. .++
T Consensus 43 l~~g~~VLDlGcGtG~~a~~L-a~~g~~V~gvD~S~~ml~~Ar~~~~~-------~-----~v~~~~~~~~~~~~~~~~~ 109 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKA-LERGASVTVFDFSQRMCDDLAEALAD-------R-----CVTIDLLDITAEIPKELAG 109 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHH-HHTTCEEEEEESCHHHHHHHHHHTSS-------S-----CCEEEECCTTSCCCGGGTT
T ss_pred CCCcCEEEEEeCcchHHHHHH-HhcCCEEEEEECCHHHHHHHHHHHHh-------c-----cceeeeeecccccccccCC
Confidence 456789999999999999988 57788999999999999999998742 1 22333333322 136
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+||+|+++.++||++.++...+++++.++| |||.++++
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 899999999999999888889999999999 99999876
No 61
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.70 E-value=2.7e-17 Score=145.96 Aligned_cols=115 Identities=12% Similarity=0.068 Sum_probs=84.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCC------------CC-----------CC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMA------------PD-----------MH 211 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~------------~~-----------~~ 211 (272)
..++.+|||||||+|.++..++...+.+|+++|+|+.|++.|++++......- .. ..
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 34667999999999988875533344579999999999999998763210000 00 00
Q ss_pred CceE-EEEeCCCCCCC----CCCcceeeEechhhhhcC-h-hhHHHHHHHHHHhcccCcEEEEec
Q 024100 212 KATN-FFCVPLQDFTP----ETGRYDVIWVQWCIGHLT-D-DDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 212 ~~v~-~~~~d~~~~~~----~~~~fDlIvs~~vl~hl~-d-~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.++. ++++|+.+..+ ..++||+|+++++|||+. + +++..+|++++++|||||.+++..
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1233 88999987422 235899999999999973 3 567799999999999999998874
No 62
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.69 E-value=1.2e-16 Score=149.87 Aligned_cols=217 Identities=13% Similarity=0.132 Sum_probs=133.9
Q ss_pred CCeeEEEeccchhHHHHHHHHhhcCCCCCCCCCceeecccCCCCcccCCHHHHHHHHhccc---ccchhhhhHHHHHHH-
Q 024100 35 KPTLHLLHVGRRKEKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQIGED---GEQQEKKTQWYREGI- 110 (272)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~~~e~W~~~~~~~---~~~~~~~~~~y~~~~- 110 (272)
...+-++.+||++++++..+++.++.- ++ +..+++.|.+..|. .+..++..+..+.. ....+....|.....
T Consensus 100 ~~~~v~~~lpk~~~~l~~~L~~l~~~l-~~-~~~i~~~g~~~~~~--~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~ 175 (375)
T 4dcm_A 100 QPGVVLIKVPKTLALLEQQLRALRKVV-TS-DTRIIAGAKARDIH--TSTLELFEKVLGPTTTTLAWKKARLINCTFNEP 175 (375)
T ss_dssp SCSEEEEECCSCHHHHHHHHHHHHTTC-CT-TSEEEEEEEGGGCC--HHHHHHHHHHTCCEEECCCBTTEEEEEECCCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHhhC-CC-CCEEEEEecccchH--HHHHHHHHhhcCccchhhhhceeEEEEEeCCCC
Confidence 466789999999999999999998854 23 66888888888883 34555555543331 111111111111000
Q ss_pred --------hhhhcchhhhhccccCCCCCcchhhhhHHHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhc--C
Q 024100 111 --------SYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY--F 180 (272)
Q Consensus 111 --------~YW~~~~~~~~~~lggy~~~s~~d~~~s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~--~ 180 (272)
..|.-....+ .+...-..++...+.....++...+. ..++.+|||+|||+|.++..++ +. .
T Consensus 176 ~~~~~~~~~~~~~~~~~~-~~~~~pg~Fs~~~~d~~~~~ll~~l~-------~~~~~~VLDlGcG~G~~s~~la-~~~p~ 246 (375)
T 4dcm_A 176 QLADAPQTVSWKLEGTDW-TIHNHANVFSRTGLDIGARFFMQHLP-------ENLEGEIVDLGCGNGVIGLTLL-DKNPQ 246 (375)
T ss_dssp CCCCCCSCEEEEETTTTE-EEEECTTCTTCSSCCHHHHHHHHTCC-------CSCCSEEEEETCTTCHHHHHHH-HHCTT
T ss_pred CCCCCCCceEEEecCCce-EEEeCCCcccCCcccHHHHHHHHhCc-------ccCCCeEEEEeCcchHHHHHHH-HHCCC
Confidence 0111000000 00000011222233333333333222 2345799999999999999885 55 4
Q ss_pred CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEechhhhh---cChhhHHHHHHHHHH
Q 024100 181 NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH---LTDDDFVSFFKRAKE 257 (272)
Q Consensus 181 ~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~vl~h---l~d~~~~~~l~~~~r 257 (272)
.+|+++|+|+.|++.|++++..... ....+++|+++|+.+.. ++++||+|+++..+|+ +++....++|+++.+
T Consensus 247 ~~V~gvD~s~~al~~Ar~n~~~ngl---~~~~~v~~~~~D~~~~~-~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~ 322 (375)
T 4dcm_A 247 AKVVFVDESPMAVASSRLNVETNMP---EALDRCEFMINNALSGV-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARR 322 (375)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCG---GGGGGEEEEECSTTTTC-CTTCEEEEEECCCC-------CCHHHHHHHHHHH
T ss_pred CEEEEEECcHHHHHHHHHHHHHcCC---CcCceEEEEechhhccC-CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHH
Confidence 6899999999999999998753210 01135889999998743 4468999999999876 334445579999999
Q ss_pred hcccCcEEEEe
Q 024100 258 NIARSGTFLLS 268 (272)
Q Consensus 258 ~LkpgG~liv~ 268 (272)
.|+|||.++++
T Consensus 323 ~LkpgG~l~iv 333 (375)
T 4dcm_A 323 CLKINGELYIV 333 (375)
T ss_dssp HEEEEEEEEEE
T ss_pred hCCCCcEEEEE
Confidence 99999998774
No 63
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=2e-17 Score=144.86 Aligned_cols=103 Identities=14% Similarity=0.070 Sum_probs=83.6
Q ss_pred CCCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC--CCCCCcce
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD 232 (272)
.++.+|||||||+|..+..+ ++. ..++++||+|+.|++.|+++... ...++.++.+|+++. ++++++||
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~-~~~~~~~v~~id~~~~~~~~a~~~~~~-------~~~~~~~~~~~a~~~~~~~~~~~FD 130 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKV-QEAPIDEHWIIECNDGVFQRLRDWAPR-------QTHKVIPLKGLWEDVAPTLPDGHFD 130 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHH-TTSCEEEEEEEECCHHHHHHHHHHGGG-------CSSEEEEEESCHHHHGGGSCTTCEE
T ss_pred cCCCeEEEECCCccHHHHHH-HHhCCcEEEEEeCCHHHHHHHHHHHhh-------CCCceEEEeehHHhhcccccccCCc
Confidence 46779999999999999977 455 45899999999999999998753 346788999988654 34557899
Q ss_pred eeE-----echhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIW-----VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIv-----s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.|+ +.++++|+.+.+ .++++++|+|||||.|+..
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~--~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFN--FIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHH--HHHHTHHHHEEEEEEEEEC
T ss_pred eEEEeeeecccchhhhcchh--hhhhhhhheeCCCCEEEEE
Confidence 987 466777876665 9999999999999998754
No 64
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.69 E-value=4.5e-17 Score=134.00 Aligned_cols=97 Identities=16% Similarity=0.224 Sum_probs=84.3
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..++ +.+.+++++|+|+.|++.++++. .++++.++| .++++++||+|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~-~~~~~v~~vD~s~~~~~~a~~~~-----------~~v~~~~~d---~~~~~~~~D~v~ 80 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLL-EFATKLYCIDINVIALKEVKEKF-----------DSVITLSDP---KEIPDNSVDFIL 80 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHH-TTEEEEEEECSCHHHHHHHHHHC-----------TTSEEESSG---GGSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHH-hhcCeEEEEeCCHHHHHHHHHhC-----------CCcEEEeCC---CCCCCCceEEEE
Confidence 466799999999999999884 66569999999999999999873 378899888 444567999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++.+++|+++.. .+++++.+.|+|||.+++.+
T Consensus 81 ~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 81 FANSFHDMDDKQ--HVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp EESCSTTCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EccchhcccCHH--HHHHHHHHhcCCCCEEEEEE
Confidence 999999997766 99999999999999998875
No 65
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=3.5e-17 Score=142.40 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=85.2
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC--CCCCCcce
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD 232 (272)
.++.+|||+|||+|.++..+ ++.. .+|+++|+|+.|++.|+++... ...++.++++|++++ ++++++||
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l-~~~~~~~v~gvD~s~~~l~~a~~~~~~-------~~~~v~~~~~d~~~~~~~~~~~~fD 130 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKV-QEAPIDEHWIIECNDGVFQRLRDWAPR-------QTHKVIPLKGLWEDVAPTLPDGHFD 130 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHH-HTSCEEEEEEEECCHHHHHHHHHHGGG-------CSSEEEEEESCHHHHGGGSCTTCEE
T ss_pred CCCCeEEEEeccCCHHHHHH-HhcCCCeEEEEcCCHHHHHHHHHHHHh-------cCCCeEEEecCHHHhhcccCCCceE
Confidence 35679999999999999987 4644 4899999999999999998743 236799999999887 66668999
Q ss_pred eeEe-chhh--hhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWV-QWCI--GHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs-~~vl--~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|++ .+.+ ++....++..++++++++|+|||.+++.+
T Consensus 131 ~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 9999 6653 22223445588999999999999998654
No 66
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.68 E-value=7.8e-17 Score=136.14 Aligned_cols=102 Identities=20% Similarity=0.170 Sum_probs=86.5
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
+. +|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... ..++.++++|+.++++++++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFL-ASLGYEVTAVDQSSVGLAKAKQLAQEK-------GVKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHH-HTTTCEEEEECSSHHHHHHHHHHHHHH-------TCCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHH-HhCCCeEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcChhhcCCCcCCccEEEE
Confidence 44 9999999999999977 466779999999999999999987431 23789999999988766679999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++ .|++..+...+++++.++|+|||.+++..
T Consensus 101 ~~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 101 IF--CHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp EC--CCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred Eh--hcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 64 46666677799999999999999998764
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=3e-16 Score=130.43 Aligned_cols=100 Identities=18% Similarity=0.220 Sum_probs=88.8
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..++ +.+.+++++|+|+.|++.+++++ .++.++++|+.++++++++||+|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~-~~~~~v~~~D~~~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLS-KQGHDVLGTDLDPILIDYAKQDF-----------PEARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHH-HTTCEEEEEESCHHHHHHHHHHC-----------TTSEEEECCTTTSCCCCCCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHH-HCCCcEEEEcCCHHHHHHHHHhC-----------CCCcEEEcccccCCCCCCceeEEEE
Confidence 56799999999999999884 66789999999999999999875 2589999999987766679999999
Q ss_pred c-hhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 Q-WCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~-~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+ .+++|+++++...+++++.+.|+|||.+++.
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 8 7899998887889999999999999998874
No 68
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.68 E-value=2e-16 Score=132.04 Aligned_cols=117 Identities=9% Similarity=0.049 Sum_probs=87.0
Q ss_pred HHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEe
Q 024100 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV 219 (272)
Q Consensus 140 ~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~ 219 (272)
.+...++... +.++.+|||+|||+|.++..+ ++...+|+++|+|+.|++.|++++... ...++++++.
T Consensus 10 ~~~~~~l~~~-----~~~~~~vLDiGcG~G~~~~~l-a~~~~~v~~vD~s~~~l~~a~~~~~~~------~~~~v~~~~~ 77 (185)
T 3mti_A 10 HMSHDFLAEV-----LDDESIVVDATMGNGNDTAFL-AGLSKKVYAFDVQEQALGKTSQRLSDL------GIENTELILD 77 (185)
T ss_dssp HHHHHHHHTT-----CCTTCEEEESCCTTSHHHHHH-HTTSSEEEEEESCHHHHHHHHHHHHHH------TCCCEEEEES
T ss_pred HHHHHHHHHh-----CCCCCEEEEEcCCCCHHHHHH-HHhCCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEeC
Confidence 3444555433 346779999999999999988 466889999999999999999987532 2257999998
Q ss_pred CCCCCC-CCCCcceeeEechhhhhc-------ChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 220 PLQDFT-PETGRYDVIWVQWCIGHL-------TDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 220 d~~~~~-~~~~~fDlIvs~~vl~hl-------~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+.+.++ +.+++||+|+++....+. ...+...+++++.+.|+|||.+++.
T Consensus 78 ~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 78 GHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp CGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 877742 235689999987422221 1244558999999999999998765
No 69
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.67 E-value=1.8e-16 Score=148.23 Aligned_cols=113 Identities=15% Similarity=0.167 Sum_probs=90.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCC--CCCCCCceEEEEeCCCCC------
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHM--APDMHKATNFFCVPLQDF------ 224 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~--~~~~~~~v~~~~~d~~~~------ 224 (272)
..++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|++++...... ......+++|+++|++++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3467799999999999999885433 349999999999999999876321000 000125899999999987
Q ss_pred CCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 225 ~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++++++||+|+++.+++|+++.. .+|++++++|+|||.+++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKL--ALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCCHH--HHHHHHHHHcCCCCEEEEEE
Confidence 66668999999999999998766 99999999999999998865
No 70
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.67 E-value=2e-16 Score=142.23 Aligned_cols=108 Identities=24% Similarity=0.341 Sum_probs=89.1
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
.+.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++..... ....+++|+++|+.++++ +++||+|++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l-~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~v~~~~~d~~~~~~-~~~fD~v~~ 156 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPF-LDLGWEVTALELSTSVLAAFRKRLAEAPA---DVRDRCTLVQGDMSAFAL-DKRFGTVVI 156 (299)
T ss_dssp CCSCEEEETCTTTTTHHHH-HTTTCCEEEEESCHHHHHHHHHHHHTSCH---HHHTTEEEEECBTTBCCC-SCCEEEEEE
T ss_pred CCCcEEEEeccCCHHHHHH-HHcCCeEEEEECCHHHHHHHHHHHhhccc---ccccceEEEeCchhcCCc-CCCcCEEEE
Confidence 3459999999999999988 46688999999999999999998753100 000579999999999876 579999986
Q ss_pred c-hhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 Q-WCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~-~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
. .+++|+++++...+|+++.++|+|||.+++..
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4 77888877778899999999999999998753
No 71
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=4.1e-16 Score=134.80 Aligned_cols=101 Identities=20% Similarity=0.279 Sum_probs=86.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
+..+|||+|||+|.++..+ ++. .+|+++|+|+.|++.|++++... ..+++++++|+.+++++ ++||+|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l-~~~-~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLL-ADH-YEVTGVDLSEEMLEIAQEKAMET-------NRHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHH-TTT-SEEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHH-hhC-CeEEEEECCHHHHHHHHHhhhhc-------CCceEEEEcChhhcCCC-CCcCEEEE
Confidence 4579999999999999977 466 89999999999999999987431 24789999999888765 68999999
Q ss_pred ch-hhhhcC-hhhHHHHHHHHHHhcccCcEEEE
Q 024100 237 QW-CIGHLT-DDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 237 ~~-vl~hl~-d~~~~~~l~~~~r~LkpgG~liv 267 (272)
.. +++|+. .++...+++++.++|+|||.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 87 999994 45677999999999999999876
No 72
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.67 E-value=1.1e-16 Score=145.78 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=82.9
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCC------CC--CCCC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ------DF--TPET 228 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~------~~--~~~~ 228 (272)
++.+|||||||+|..+..++...+.+|+|+|+|+.||+.|+++............-+++|.+.|+. ++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 467999999999987776655556799999999999999999864321000000013678888872 21 1234
Q ss_pred CcceeeEechhhhhc-ChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 229 GRYDVIWVQWCIGHL-TDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl-~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++||+|+|.+++||+ .+++...+|++++++|+|||.+++.
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 699999999999986 3345679999999999999999865
No 73
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.67 E-value=2.6e-16 Score=141.88 Aligned_cols=112 Identities=17% Similarity=0.197 Sum_probs=88.0
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCC----------------------------
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHM---------------------------- 206 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~---------------------------- 206 (272)
++.+|||||||+|.++..++ +. ..+|++||+|+.|++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la-~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIA-CKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHH-HHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHH-HHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 56799999999999999885 55 459999999999999999986532100
Q ss_pred ------------------------CCCCCCceEEEEeCCCCCC-----CCCCcceeeEechhhhhc----ChhhHHHHHH
Q 024100 207 ------------------------APDMHKATNFFCVPLQDFT-----PETGRYDVIWVQWCIGHL----TDDDFVSFFK 253 (272)
Q Consensus 207 ------------------------~~~~~~~v~~~~~d~~~~~-----~~~~~fDlIvs~~vl~hl----~d~~~~~~l~ 253 (272)
......+++|.++|+.... +..++||+|+|..+++|+ .+++...+|+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 0001158999999997654 345799999999999887 5667789999
Q ss_pred HHHHhcccCcEEEEec
Q 024100 254 RAKENIARSGTFLLSH 269 (272)
Q Consensus 254 ~~~r~LkpgG~liv~E 269 (272)
+++++|+|||.+++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999998753
No 74
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.66 E-value=9e-16 Score=135.31 Aligned_cols=97 Identities=21% Similarity=0.262 Sum_probs=83.2
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|+++.. . .++++|+.++++++++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l-~~~~~~v~gvD~s~~~l~~a~~~~~----------~--~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFL-QERGFEVVLVDPSKEMLEVAREKGV----------K--NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHH-HTTTCEEEEEESCHHHHHHHHHHTC----------S--CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHH-HHcCCeEEEEeCCHHHHHHHHhhcC----------C--CEEECcHHHCCCCCCCEEEEEE
Confidence 5679999999999999988 4667899999999999999998752 1 2889999988876789999999
Q ss_pred chhhhhc-ChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHL-TDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl-~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..+++|+ ++ ...+|+++.++|+|||.+++.
T Consensus 121 ~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 121 LGDVLSYVEN--KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp CSSHHHHCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhcccc--HHHHHHHHHHHcCCCeEEEEE
Confidence 8877776 44 459999999999999999875
No 75
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.66 E-value=2.1e-16 Score=134.65 Aligned_cols=98 Identities=18% Similarity=0.217 Sum_probs=81.3
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC---CCCC-Ccce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPET-GRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~---~~~~-~~fD 232 (272)
++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|+++ .++.+.+.|+.++ ++.. ++||
T Consensus 52 ~~~~vLdiG~G~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~------------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRAL-ADRGIEAVGVDGDRTLVDAARAA------------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp CCSEEEEETCTTCHHHHHH-HTTTCEEEEEESCHHHHHHHHHT------------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCEEEEeCCCCCHHHHHH-HHCCCEEEEEcCCHHHHHHHHHh------------cccccchhhHHhhcccccccCCCcc
Confidence 4579999999999999988 46688999999999999999986 2467778777665 3333 4699
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+|+++.+++ ..+.. .++++++++|+|||.+++.+.
T Consensus 119 ~v~~~~~l~-~~~~~--~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALL-HQDII--ELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCC-SSCCH--HHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECchhh-hhhHH--HHHHHHHHHhCCCeEEEEEec
Confidence 999999997 55555 999999999999999998653
No 76
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.65 E-value=2.1e-16 Score=138.37 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=87.5
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCC------------CC-----------CC
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMA------------PD-----------MH 211 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~------------~~-----------~~ 211 (272)
.++.+|||+|||+|.++..+ ++.+. +|+++|+|+.|++.|++++....... .+ ..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l-~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLS-ACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTT-GGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHH-hhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 45679999999999999966 56666 99999999999999999874310000 00 00
Q ss_pred Cce-EEEEeCCCCCCC-CC---CcceeeEechhhhhcChh--hHHHHHHHHHHhcccCcEEEEec
Q 024100 212 KAT-NFFCVPLQDFTP-ET---GRYDVIWVQWCIGHLTDD--DFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 212 ~~v-~~~~~d~~~~~~-~~---~~fDlIvs~~vl~hl~d~--~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.++ .++++|+.+..+ ++ ++||+|++.++++|++.. +...+|+++.++|+|||.+++.+
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 127 899999988654 44 689999999999966543 66799999999999999998865
No 77
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.65 E-value=2.2e-16 Score=142.62 Aligned_cols=109 Identities=13% Similarity=0.025 Sum_probs=90.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
+.++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|++++... ....+++|+++|+.+++++ ++||
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~-~~fD 189 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH-----ALAGQITLHRQDAWKLDTR-EGYD 189 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS-----TTGGGEEEEECCGGGCCCC-SCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc-----CCCCceEEEECchhcCCcc-CCeE
Confidence 3567799999999999999773122 459999999999999999998542 1234699999999998766 7999
Q ss_pred eeEechhhhhcChhh-HHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDDD-FVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~~-~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|+++.+++|+++++ ...+++++.++|+|||.+++.+
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 190 LLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 999999999998765 3468999999999999999865
No 78
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.64 E-value=1.5e-15 Score=141.01 Aligned_cols=107 Identities=17% Similarity=0.318 Sum_probs=91.2
Q ss_pred CCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 232 (272)
...+|||||||+|.++..++ +.++ +++++|. +.|++.|++++... ....+++|..+|+.+.. ++ ++||
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~p-~~~D 250 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCV-QYNKEVEVTIVDL-PQQLEMMRKQTAGL-----SGSERIHGHGANLLDRDVPFP-TGFD 250 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHH-HHSTTCEEEEEEC-HHHHHHHHHHHTTC-----TTGGGEEEEECCCCSSSCCCC-CCCS
T ss_pred CCCEEEEeCCCcCHHHHHHH-HhCCCCEEEEEeC-HHHHHHHHHHHHhc-----CcccceEEEEccccccCCCCC-CCcC
Confidence 45699999999999999885 5443 7999999 99999999987532 12358999999998763 33 6899
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
+|++.+++||+++++...+|++++++|+|||.+++.|.+
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 999999999999998889999999999999999998864
No 79
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.63 E-value=2.6e-15 Score=134.70 Aligned_cols=121 Identities=16% Similarity=0.083 Sum_probs=93.1
Q ss_pred hHHHHHHHHHhccCCCccCCCCCeeeEeeccc---chHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCC
Q 024100 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGI---GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMH 211 (272)
Q Consensus 137 ~s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGt---G~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~ 211 (272)
..+.|+..++..... .....+|||||||+ |.++..+ .+. ..+|+++|.|+.|++.|++++.. .
T Consensus 60 ~~~~~~~~~~~~l~~---~~~~~~vLDlGcG~pt~G~~~~~~-~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--------~ 127 (274)
T 2qe6_A 60 ENRKVLVRGVRFLAG---EAGISQFLDLGSGLPTVQNTHEVA-QSVNPDARVVYVDIDPMVLTHGRALLAK--------D 127 (274)
T ss_dssp HHHHHHHHHHHHHHT---TTCCCEEEEETCCSCCSSCHHHHH-HHHCTTCEEEEEESSHHHHHHHHHHHTT--------C
T ss_pred HHhHHHHHHHHHHhh---ccCCCEEEEECCCCCCCChHHHHH-HHhCCCCEEEEEECChHHHHHHHHhcCC--------C
Confidence 334556555442211 12346999999999 9988744 454 35899999999999999998732 3
Q ss_pred CceEEEEeCCCCCC-----------CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 212 KATNFFCVPLQDFT-----------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 212 ~~v~~~~~d~~~~~-----------~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.+++|+++|+.+.. ++..+||+|+++.+|||+++.+...+|++++++|+|||++++.+
T Consensus 128 ~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 128 PNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp TTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 57999999997631 12247999999999999998777799999999999999998875
No 80
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.63 E-value=5.1e-16 Score=138.96 Aligned_cols=112 Identities=13% Similarity=0.152 Sum_probs=81.9
Q ss_pred CCCeeeEeecccchHHHHHHHh-cCCcEEEEeCCHHHHHHHHHhccccCCCC------------CCC------------C
Q 024100 157 QHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMA------------PDM------------H 211 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~-~~~~v~~vD~S~~mld~A~~~l~~~~~~~------------~~~------------~ 211 (272)
++.+|||||||+|.++. +++. .+.+|+++|+|+.|++.|++++....... ... .
T Consensus 71 ~~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56799999999999655 4333 46799999999999999998764210000 000 0
Q ss_pred CceEEEEeCCCC-CCC-----CCCcceeeEechhhhhcChh--hHHHHHHHHHHhcccCcEEEEec
Q 024100 212 KATNFFCVPLQD-FTP-----ETGRYDVIWVQWCIGHLTDD--DFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 212 ~~v~~~~~d~~~-~~~-----~~~~fDlIvs~~vl~hl~d~--~~~~~l~~~~r~LkpgG~liv~E 269 (272)
..+.++.+|+.+ .++ ++++||+|+++++|+|+... +...+|++++++|+|||.+++.+
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 125677788877 332 23579999999999996543 66699999999999999998763
No 81
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.63 E-value=1.1e-15 Score=130.47 Aligned_cols=97 Identities=20% Similarity=0.249 Sum_probs=83.9
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC--CCCCCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD--FTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fDlI 234 (272)
++.+|||+|||+|.++..++ +...+++++|+|+.|++.++++. .++.++|+.+ .++++++||+|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~-~~~~~~~~~D~~~~~~~~~~~~~-------------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIK-ENGTRVSGIEAFPEAAEQAKEKL-------------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHH-TTTCEEEEEESSHHHHHHHHTTS-------------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHH-hcCCeEEEEeCCHHHHHHHHHhC-------------CcEEEcchhhcCCCCCCCccCEE
Confidence 56799999999999999885 55789999999999999998754 2688899876 34455799999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++.+++|++++. .+++++.++|+|||.+++..
T Consensus 98 ~~~~~l~~~~~~~--~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEHLFDPW--AVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGGSSCHH--HHHHHTGGGEEEEEEEEEEE
T ss_pred EECChhhhcCCHH--HHHHHHHHHcCCCCEEEEEe
Confidence 9999999998876 99999999999999998764
No 82
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.62 E-value=3.9e-15 Score=150.35 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=91.6
Q ss_pred CCCeeeEeecccchHHHHHHHhcC---CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~---~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
++.+|||||||+|.++..| ++.+ .+|++||+|+.|++.|++++............+++|+++|+.++++.+++||+
T Consensus 721 ~g~rVLDVGCGTG~lai~L-Ar~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSL-LDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHH-TSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHH-HHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 5679999999999999977 5776 69999999999999999865421100011345899999999999887789999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|++..+++|++++....+++++.++|+|| .+++.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEE
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEE
Confidence 99999999999988888999999999999 55554
No 83
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.62 E-value=4.7e-15 Score=135.47 Aligned_cols=108 Identities=15% Similarity=0.140 Sum_probs=90.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..+..+|||+|||+|.++..++ +.++ +++++|+ +.|++.|++++... ....+++|..+|+.+ +.+ .+||
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~-~~p-~~~D 237 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALL-TAHEDLSGTVLDL-QGPASAAHRRFLDT-----GLSGRAQVVVGSFFD-PLP-AGAG 237 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-HHHHHHHHHHHHHT-----TCTTTEEEEECCTTS-CCC-CSCS
T ss_pred CCCCCEEEEeCCChhHHHHHHH-HHCCCCeEEEecC-HHHHHHHHHhhhhc-----CcCcCeEEecCCCCC-CCC-CCCc
Confidence 3456799999999999999885 5444 6899999 99999999987532 123679999999973 223 2899
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
+|++.+++||+++++..++|++++++|+|||++++.|..
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 999999999999998889999999999999999998864
No 84
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.62 E-value=6.9e-16 Score=145.92 Aligned_cols=144 Identities=12% Similarity=0.037 Sum_probs=102.8
Q ss_pred ccccCCCCCcchhhhh-HHHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHh
Q 024100 122 GVLGGFGNVNEVDIKG-SEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (272)
Q Consensus 122 ~~lggy~~~s~~d~~~-s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~ 199 (272)
..+.+|..++..-+.. ...++..++... .+.++.+|||||||+|.++..++..... +|+|||+|+.|++.|+++
T Consensus 141 ~~L~~Ye~Fs~~vYGEt~~~~i~~il~~l----~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n 216 (438)
T 3uwp_A 141 EKLNNYEPFSPEVYGETSFDLVAQMIDEI----KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETM 216 (438)
T ss_dssp GGSCCCSSSCGGGGGGTHHHHHHHHHHHH----CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHH
T ss_pred HHhcCcccCCCcccCCCCHHHHHHHHHhc----CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 3455676655554433 344555665532 2567889999999999999988544444 599999999999999886
Q ss_pred ccccCCC--CCC-CCCceEEEEeCCCCCCCCC--CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCCC
Q 024100 200 LAPENHM--APD-MHKATNFFCVPLQDFTPET--GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSLI 272 (272)
Q Consensus 200 l~~~~~~--~~~-~~~~v~~~~~d~~~~~~~~--~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~~ 272 (272)
...++.. ..+ ...+++|+++|+.+.++.+ ..||+|+++..+ | ++++...|+++.+.|+|||.||..|.+.
T Consensus 217 ~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F--~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 217 DREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-F--GPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp HHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-C--CHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred HHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEcccc-c--CchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 4221000 000 1258999999998876532 379999998776 3 3566689999999999999999998763
No 85
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.61 E-value=1.5e-15 Score=137.53 Aligned_cols=112 Identities=12% Similarity=0.111 Sum_probs=87.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCC-CCCCCCceEEEEeCCCCCC----C--CCC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-APDMHKATNFFCVPLQDFT----P--ETG 229 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~-~~~~~~~v~~~~~d~~~~~----~--~~~ 229 (272)
++.+|||+|||+|.++..++.....+++++|+|+.|++.|+++....... ......+++++++|+++.+ + +++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 56799999999999999886444669999999999999999886421000 0002247899999998865 3 235
Q ss_pred cceeeEechhhhhc-Ch-hhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHL-TD-DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl-~d-~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+||+|+++.++||+ .+ ++...+|+++.++|+|||.+++.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 89999999999998 33 55679999999999999999875
No 86
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.61 E-value=1.5e-15 Score=131.29 Aligned_cols=91 Identities=15% Similarity=0.153 Sum_probs=78.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCC-CCCCCC-CCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFTPE-TGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~-~~~~~~-~~~fDl 233 (272)
.++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|+++. .+++|+++|+ +.++++ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l-~~~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARF-GPQAARWAAYDFSPELLKLARANA-----------PHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHH-GGGSSEEEEEESCHHHHHHHHHHC-----------TTSEEEECCSCSSCCTTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHH-HHcCCEEEEEECCHHHHHHHHHhC-----------CCceEEEcchhhccCCcCCCCEEE
Confidence 35679999999999999977 577889999999999999999873 3689999999 456655 679999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEE
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~li 266 (272)
|+++ .+.. .+++++.++|+|||.++
T Consensus 115 v~~~------~~~~--~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 115 IVSR------RGPT--SVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEE------SCCS--GGGGGHHHHEEEEEEEE
T ss_pred EEeC------CCHH--HHHHHHHHHcCCCcEEE
Confidence 9987 2444 89999999999999987
No 87
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.61 E-value=1.7e-15 Score=133.77 Aligned_cols=108 Identities=13% Similarity=0.051 Sum_probs=86.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHH------HHHHHHHhccccCCCCCCCCCceEEEEeC-C--CC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSH------FLDAARESLAPENHMAPDMHKATNFFCVP-L--QD 223 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~------mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~--~~ 223 (272)
+.++.+|||||||+|.++..++...+ .+|+++|+|+. |++.|++++... ....+++++++| + ..
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG-----PLGDRLTVHFNTNLSDDL 115 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-----TTGGGEEEECSCCTTTCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc-----CCCCceEEEECChhhhcc
Confidence 45678999999999999998853323 69999999997 999999987532 123579999998 3 34
Q ss_pred CCCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 224 ~~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.++++++||+|++..+++|+++++ .+++.+.++++|||.+++.+
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEE
Confidence 444557999999999999998887 67777778888899998865
No 88
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.60 E-value=3.5e-15 Score=135.70 Aligned_cols=108 Identities=13% Similarity=0.155 Sum_probs=91.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.+..+|||+|||+|.++..++ +. ..+++++|+| .|++.|++++... ....+++|..+|+.+.+++. .||+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~~-~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~-~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVA-QHNPNAEIFGVDWA-SVLEVAKENARIQ-----GVASRYHTIAGSAFEVDYGN-DYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHH-HHCTTCEEEEEECH-HHHHHHHHHHHHH-----TCGGGEEEEESCTTTSCCCS-CEEE
T ss_pred CCCCEEEEECCCcCHHHHHHH-HHCCCCeEEEEecH-HHHHHHHHHHHhc-----CCCcceEEEecccccCCCCC-CCcE
Confidence 466799999999999999885 55 3489999999 9999999987432 12346999999998765543 5999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
|++.+++||+++++...++++++++|+|||.+++.|..
T Consensus 236 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 236 VLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 99999999999888889999999999999999887753
No 89
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.60 E-value=1.1e-15 Score=128.33 Aligned_cols=107 Identities=11% Similarity=0.008 Sum_probs=86.8
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fDl 233 (272)
.++.+|||+|||+|.++..+++....+|+++|+|+.|++.|++++... ...+++++++|+.++. +++++||+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL------GLSGATLRRGAVAAVVAAGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH------TCSCEEEEESCHHHHHHHCCSSCCSE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc------CCCceEEEEccHHHHHhhccCCCccE
Confidence 356799999999999999876544558999999999999999987542 2257999999998763 23468999
Q ss_pred eEechhhhhcChhhHHHHHHHHHH--hcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKE--NIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r--~LkpgG~liv~E 269 (272)
|+++..+++. .++..++++++.+ +|+|||.+++..
T Consensus 117 i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 117 VLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp EEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred EEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 9999887653 3456699999999 999999998754
No 90
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.59 E-value=3.2e-15 Score=128.37 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=81.4
Q ss_pred CCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEec
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~ 237 (272)
+.+|||+|||+|.++..++ .. +++|+|+.|++.++++ +++++++|+.++++++++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~-~~----~~vD~s~~~~~~a~~~-------------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLK-IK----IGVEPSERMAEIARKR-------------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHT-CC----EEEESCHHHHHHHHHT-------------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHH-HH----hccCCCHHHHHHHHhc-------------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 6699999999999999774 44 9999999999999874 4789999998887766799999999
Q ss_pred hhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 238 WCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 238 ~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.+++|++++. .+|+++.++|+|||.+++.+
T Consensus 110 ~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 110 TTICFVDDPE--RALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp SCGGGSSCHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred chHhhccCHH--HHHHHHHHHcCCCcEEEEEE
Confidence 9999997776 99999999999999998764
No 91
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.59 E-value=7.8e-15 Score=124.44 Aligned_cols=103 Identities=14% Similarity=0.186 Sum_probs=85.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..++.+|||+|||+|.++..++ +.+ .+|+++|+|+.|++.|++++... ...+++++++|+.+.....++||
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la-~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~D 110 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEAS-NLMPNGRIFALERNPQYLGFIRDNLKKF------VARNVTLVEAFAPEGLDDLPDPD 110 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHH-HHCTTSEEEEEECCHHHHHHHHHHHHHH------TCTTEEEEECCTTTTCTTSCCCS
T ss_pred CCCCCEEEEECCCCCHHHHHHH-HHCCCCEEEEEeCCHHHHHHHHHHHHHh------CCCcEEEEeCChhhhhhcCCCCC
Confidence 4567899999999999999884 666 68999999999999999987532 23579999999976544436899
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|++..+++ +...+++++.+.|+|||.+++..
T Consensus 111 ~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 111 RVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp EEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEe
Confidence 999998874 34589999999999999998764
No 92
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.59 E-value=3e-15 Score=127.28 Aligned_cols=99 Identities=16% Similarity=0.080 Sum_probs=84.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..+ ++...+|+++|+|+.+++.|++++... ...+++++++|+.+..+..++||+|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l-a~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAIL-AHLVQHVCSVERIKGLQWQARRRLKNL------DLHNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHH-HHHSSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHH-HHhCCEEEEEecCHHHHHHHHHHHHHc------CCCceEEEECCcccCCccCCCccEE
Confidence 456789999999999999977 466889999999999999999987542 2347999999998765555799999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+++.+++|+++ ++.+.|+|||.+++.
T Consensus 148 ~~~~~~~~~~~--------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 148 IVTAAPPEIPT--------ALMTQLDEGGILVLP 173 (210)
T ss_dssp EESSBCSSCCT--------HHHHTEEEEEEEEEE
T ss_pred EEccchhhhhH--------HHHHhcccCcEEEEE
Confidence 99999999875 478999999998875
No 93
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.59 E-value=4.3e-15 Score=136.47 Aligned_cols=106 Identities=20% Similarity=0.275 Sum_probs=90.2
Q ss_pred CCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCccee
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fDl 233 (272)
..+|||||||+|.++..++ +.++ +++++|+ +.|++.|++++... ....+++|..+|+.+.+ ++ +.||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~-~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVL-RRHPQLTGQIWDL-PTTRDAARKTIHAH-----DLGGRVEFFEKNLLDARNFEG-GAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHH-HHCTTCEEEEEEC-GGGHHHHHHHHHHT-----TCGGGEEEEECCTTCGGGGTT-CCEEE
T ss_pred CCEEEEeCCCcCHHHHHHH-HhCCCCeEEEEEC-HHHHHHHHHHHHhc-----CCCCceEEEeCCcccCcccCC-CCccE
Confidence 7799999999999999885 5543 7899999 88999999887532 12357999999998875 33 57999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
|++.+++||+++++...+|+++++.|+|||.+++.|.+
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99999999999988889999999999999999998754
No 94
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.58 E-value=7.7e-15 Score=136.46 Aligned_cols=108 Identities=22% Similarity=0.309 Sum_probs=90.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..+..+|||+|||+|.++..++ +.++ +++++|+ +.+++.|++++... ....+++|..+|+.+ +.+ ..||
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~~~~~-----~l~~~v~~~~~d~~~-~~p-~~~D 270 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVL-DAFPGLRGTLLER-PPVAEEARELLTGR-----GLADRCEILPGDFFE-TIP-DGAD 270 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-HHHHHHHHHHHHHT-----TCTTTEEEEECCTTT-CCC-SSCS
T ss_pred CccCcEEEEeCCCccHHHHHHH-HHCCCCeEEEEcC-HHHHHHHHHhhhhc-----CcCCceEEeccCCCC-CCC-CCce
Confidence 4567899999999999999885 5554 7899999 99999999987532 124679999999973 223 3799
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
+|++.+++||+++++..++|+++++.|+|||++++.|.+
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 999999999999998889999999999999999998754
No 95
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.58 E-value=4.7e-15 Score=134.84 Aligned_cols=102 Identities=15% Similarity=0.096 Sum_probs=84.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHh-cCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~-~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
+.++.+|||||||+|.++..++++ ...+|++||+|+.|++.|++++... ...+++|.++|+.+++ +++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~------gl~~v~~v~gDa~~l~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL------GVDGVNVITGDETVID--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH------TCCSEEEEESCGGGGG--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc------CCCCeEEEECchhhCC--CCCcCE
Confidence 678899999999999887656566 4679999999999999999987543 1268999999998875 479999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|++... . ++..++++++.+.|+|||.+++.+
T Consensus 192 V~~~a~---~--~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAAL---A--EPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EEECTT---C--SCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEECCC---c--cCHHHHHHHHHHHcCCCcEEEEEc
Confidence 998654 3 344599999999999999998764
No 96
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.58 E-value=7.8e-15 Score=121.67 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=86.5
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCc--eEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA--TNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~--v~~~~~d~~~~~~~~~~fDl 233 (272)
.++.+|||+|||+|.++..++ +...+++++|+|+.|++.|++++... ...+ ++++++|+.+... +++||+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~------~~~~~~~~~~~~d~~~~~~-~~~~D~ 122 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALA-DEVKSTTMADINRRAIKLAKENIKLN------NLDNYDIRVVHSDLYENVK-DRKYNK 122 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHG-GGSSEEEEEESCHHHHHHHHHHHHHT------TCTTSCEEEEECSTTTTCT-TSCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHH-HcCCeEEEEECCHHHHHHHHHHHHHc------CCCccceEEEECchhcccc-cCCceE
Confidence 466799999999999999884 55889999999999999999987532 2234 9999999987543 468999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+++.+++| ...+...+++++.+.|+|||.+++..
T Consensus 123 v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 123 IITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp EEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999998865 23455699999999999999998764
No 97
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.58 E-value=1.1e-14 Score=134.61 Aligned_cols=107 Identities=15% Similarity=0.157 Sum_probs=89.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..+..+|||+|||+|.++..++ +.+ .+++++|+ +.|++.|++++... ....+++|+++|+.+. .+ ..||
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~-~~~~~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~-~~-~~~D 250 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIA-LRAPHLRGTLVEL-AGPAERARRRFADA-----GLADRVTVAEGDFFKP-LP-VTAD 250 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-HHHHHHHHHHHHHT-----TCTTTEEEEECCTTSC-CS-CCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHH-HHCCCCEEEEEeC-HHHHHHHHHHHHhc-----CCCCceEEEeCCCCCc-CC-CCCC
Confidence 3467799999999999999885 554 47899999 99999999987432 1234799999998762 23 2599
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+|++++++||+++++...+|++++++|+|||.+++.|.
T Consensus 251 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 251 VVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99999999999998888999999999999999998775
No 98
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.58 E-value=8.5e-15 Score=135.25 Aligned_cols=107 Identities=17% Similarity=0.215 Sum_probs=90.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..+..+|||||||+|.++..++ +.++ +++++|+ +.|++.|++++... ....+++|+.+|+.+.++++ +|
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~--~D 258 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAML-KHFPELDSTILNL-PGAIDLVNENAAEK-----GVADRMRGIAVDIYKESYPE--AD 258 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHH-HHCTTCEEEEEEC-GGGHHHHHHHHHHT-----TCTTTEEEEECCTTTSCCCC--CS
T ss_pred CCCCCEEEEECCcccHHHHHHH-HHCCCCeEEEEec-HHHHHHHHHHHHhc-----CCCCCEEEEeCccccCCCCC--CC
Confidence 4567799999999999999885 6554 8899999 99999999987532 12346999999998875543 49
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+|++.+++||+++++..++|+++++.|+|||.+++.|.
T Consensus 259 ~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 259 AVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred EEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 99999999999998888999999999999999988774
No 99
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.57 E-value=1.1e-14 Score=119.86 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=80.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC-CCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~f 231 (272)
..++.+|||+|||+|.++..++ +. ..+|+++|+|+.|++.|++++... ....++ ++++|..+ ++..+++|
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~-~~~~d~~~~~~~~~~~~ 95 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWL-RSTPQTTAVCFEISEERRERILSNAINL-----GVSDRI-AVQQGAPRAFDDVPDNP 95 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHH-TTSSSEEEEEECSCHHHHHHHHHHHHTT-----TCTTSE-EEECCTTGGGGGCCSCC
T ss_pred ccCCCeEEEeCCCCCHHHHHHH-HHCCCCeEEEEeCCHHHHHHHHHHHHHh-----CCCCCE-EEecchHhhhhccCCCC
Confidence 3567799999999999999884 55 468999999999999999987532 122367 88888754 33222689
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|+++.+++| . .+++++.+.|+|||.+++..
T Consensus 96 D~i~~~~~~~~----~--~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 96 DVIFIGGGLTA----P--GVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp SEEEECC-TTC----T--THHHHHHHTCCTTCEEEEEE
T ss_pred CEEEECCcccH----H--HHHHHHHHhcCCCCEEEEEe
Confidence 99999999977 3 79999999999999998765
No 100
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.56 E-value=8.4e-15 Score=131.87 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=84.4
Q ss_pred CCCeeeEeecccch----HHHHHHHhc-C-----CcEEEEeCCHHHHHHHHHhccccCC----------------CCCCC
Q 024100 157 QHLVALDCGSGIGR----ITKNLLIRY-F-----NEVDLLEPVSHFLDAARESLAPENH----------------MAPDM 210 (272)
Q Consensus 157 ~~~~VLDiGcGtG~----~t~~LLa~~-~-----~~v~~vD~S~~mld~A~~~l~~~~~----------------~~~~~ 210 (272)
++.+|||+|||||. ++..| ++. . .+|+++|+|+.||+.|++..-.... .....
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L-~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITL-ADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHH-HHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred CCcEEEEeeccCChhHHHHHHHH-HHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 35699999999998 55534 343 1 3899999999999999987521000 00000
Q ss_pred ---------CCceEEEEeCCCCCCCC-CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 211 ---------HKATNFFCVPLQDFTPE-TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 211 ---------~~~v~~~~~d~~~~~~~-~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
..++.|.+.|+.+.+++ .++||+|+|.++++|++++...++++++++.|+|||++++
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 13689999999885433 4689999999999999988788999999999999999987
No 101
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.56 E-value=6.9e-16 Score=145.16 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=81.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||||||+|.++..+ ++.+.+|+++|+|+.|++.|+++-. ......|...+.+.+++++++||+|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l-~~~g~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTI-QEAGVRHLGFEPSSGVAAKAREKGI--------RVRTDFFEKATADDVRRTEGPANVI 175 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHH-HHTTCEEEEECCCHHHHHHHHTTTC--------CEECSCCSHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHH-HHcCCcEEEECCCHHHHHHHHHcCC--------CcceeeechhhHhhcccCCCCEEEE
Confidence 456779999999999999988 5777899999999999999987610 0111112233334444445799999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++.++++|++++. .+|++++++|+|||.+++..
T Consensus 176 ~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 176 YAANTLCHIPYVQ--SVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEESCGGGCTTHH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EECChHHhcCCHH--HHHHHHHHHcCCCeEEEEEe
Confidence 9999999998766 99999999999999998753
No 102
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.55 E-value=1.6e-16 Score=138.05 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=84.0
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... ....+++|+++|+.++++ +++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~l-a~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~-~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQF-ALTGMRVIAIDIDPVKIALARNNAEVY-----GIADKIEFICGDFLLLAS-FLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHHT-----TCGGGEEEEESCHHHHGG-GCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHH-HHcCCEEEEEECCHHHHHHHHHHHHHc-----CCCcCeEEEECChHHhcc-cCCCCEEEE
Confidence 5679999999999999988 577899999999999999999987542 112589999999988763 469999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+.+++|+.+.. ..+.+++++|+|||.+++
T Consensus 151 ~~~~~~~~~~~--~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 151 SPPWGGPDYAT--AETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CCCCSSGGGGG--SSSBCTTTSCSSCHHHHH
T ss_pred CCCcCCcchhh--hHHHHHHhhcCCcceeHH
Confidence 99998877665 567778888888887543
No 103
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.55 E-value=1.2e-14 Score=122.28 Aligned_cols=109 Identities=10% Similarity=0.011 Sum_probs=84.4
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CCCCcce
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 232 (272)
.++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|++++... ....+++++++|+.+++ ..+++||
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~fD 95 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL-----NLIDRVTLIKDGHQNMDKYIDCPVK 95 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT-----TCGGGEEEECSCGGGGGGTCCSCEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCCeEEEECCHHHHhhhccCCce
Confidence 466799999999999999885432 249999999999999999987542 12358999999988774 3447899
Q ss_pred eeEechhhh------hc-ChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIG------HL-TDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~------hl-~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|+++..+. +. ...+...+++++.+.|+|||.+++..
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 999887541 11 12244579999999999999988763
No 104
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.55 E-value=2.1e-14 Score=122.96 Aligned_cols=102 Identities=9% Similarity=0.065 Sum_probs=82.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..++ +...+|+++|+|+.|++.|++++... ....+++++++|+.+......+||+|
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la-~~~~~v~~vD~s~~~~~~a~~~~~~~-----g~~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWC-LAGGRAITIEPRADRIENIQKNIDTY-----GLSPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEESCTTGGGTTSCCCSEE
T ss_pred CCCCCEEEEecCCCCHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHHc-----CCCCCEEEEeCchhhhcccCCCCCEE
Confidence 4567799999999999999885 66889999999999999999987542 11237999999998843333589999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++...+ +.. +++++.+.|+|||.+++..
T Consensus 127 ~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 127 FIGGGG------SQA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp EECSCC------CHH-HHHHHHHHSCTTCEEEEEE
T ss_pred EECCcc------cHH-HHHHHHHhcCCCcEEEEEe
Confidence 988754 233 9999999999999998753
No 105
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.55 E-value=3.9e-15 Score=126.99 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=81.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCC--CceEEEEeCCCCCCCC--CCc-c
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH--KATNFFCVPLQDFTPE--TGR-Y 231 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~--~~v~~~~~d~~~~~~~--~~~-f 231 (272)
++.+|||+|||+|.++..++++....|+++|+|+.|++.|++++... .. .+++++++|+.++.+. +++ |
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~------~~~~~~v~~~~~d~~~~~~~~~~~~~f 126 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL------KCSSEQAEVINQSSLDFLKQPQNQPHF 126 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT------TCCTTTEEEECSCHHHHTTSCCSSCCE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh------CCCccceEEEECCHHHHHHhhccCCCC
Confidence 35689999999999999876555568999999999999999987542 12 5799999998765332 468 9
Q ss_pred eeeEechhhhhcChhhHHHHHHHH--HHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRA--KENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~--~r~LkpgG~liv~E 269 (272)
|+|+++..++ .. +...+++.+ .++|+|||.+++..
T Consensus 127 D~I~~~~~~~-~~--~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 127 DVVFLDPPFH-FN--LAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp EEEEECCCSS-SC--HHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CEEEECCCCC-Cc--cHHHHHHHHHhcCccCCCcEEEEEE
Confidence 9999988853 33 344888888 56799999987653
No 106
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.55 E-value=2.9e-14 Score=122.11 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=83.4
Q ss_pred CCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 232 (272)
++.+|||+|||+|.++..++ +.+ .+++++|+|+.|++.|++++... ...++.++++|+.+++ +++++||
T Consensus 41 ~~~~vLDiGcG~G~~~~~la-~~~p~~~v~gvD~s~~~l~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~D 113 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMA-KQNPDINYIGIDIQKSVLSYALDKVLEV------GVPNIKLLWVDGSDLTDYFEDGEID 113 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHH-HHCTTSEEEEEESCHHHHHHHHHHHHHH------CCSSEEEEECCSSCGGGTSCTTCCS
T ss_pred CCCeEEEEccCcCHHHHHHH-HHCCCCCEEEEEcCHHHHHHHHHHHHHc------CCCCEEEEeCCHHHHHhhcCCCCCC
Confidence 45689999999999999884 553 58999999999999999987532 2358999999998865 4567899
Q ss_pred eeEechhhhhcChh------hHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDD------DFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~------~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|++++...+.... ....+++++.+.|+|||.+++.-
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 99998764322111 12479999999999999987653
No 107
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.55 E-value=1.1e-14 Score=123.43 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=83.2
Q ss_pred CCCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..+ ++. ..+|+++|+|+.|++.|++++... ...++++.++|+.++. +++||+|
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l-~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~--~~~fD~i 129 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAA-HKLGAKSVLATDISDESMTAAEENAALN------GIYDIALQKTSLLADV--DGKFDLI 129 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHH-HHTTCSEEEEEESCHHHHHHHHHHHHHT------TCCCCEEEESSTTTTC--CSCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHH-HHCCCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEeccccccC--CCCceEE
Confidence 35679999999999999987 465 449999999999999999987532 2234999999998764 3689999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++.+++| +..+++++.+.|+|||.+++.+
T Consensus 130 ~~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 130 VANILAEI-----LLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp EEESCHHH-----HHHHGGGSGGGEEEEEEEEEEE
T ss_pred EECCcHHH-----HHHHHHHHHHhcCCCCEEEEEe
Confidence 99998876 3589999999999999998753
No 108
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.55 E-value=1e-14 Score=132.98 Aligned_cols=104 Identities=18% Similarity=0.249 Sum_probs=88.2
Q ss_pred CeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 159 LVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 159 ~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
.+|||+|||+|.++..++ +.+ .+++++|+ +.|++.|++++... ....+++|..+|+.+ +++ ++||+|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~-~~~-~~~D~v~~ 239 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAIL-QAEPSARGVMLDR-EGSLGVARDNLSSL-----LAGERVSLVGGDMLQ-EVP-SNGDIYLL 239 (334)
T ss_dssp CEEEEETCTTCHHHHHHH-HHCTTCEEEEEEC-TTCTHHHHHHTHHH-----HHTTSEEEEESCTTT-CCC-SSCSEEEE
T ss_pred CEEEEeCCCchHHHHHHH-HHCCCCEEEEeCc-HHHHHHHHHHHhhc-----CCCCcEEEecCCCCC-CCC-CCCCEEEE
Confidence 799999999999999885 553 37999999 99999999886431 112479999999977 333 57999999
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
.+++||+++++...+++++++.|+|||.+++.|..
T Consensus 240 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 240 SRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred chhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999999988889999999999999999998754
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.55 E-value=3.4e-14 Score=123.22 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=81.4
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC----CCCCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD----FTPET 228 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~----~~~~~ 228 (272)
+.++.+|||+|||+|.++..++ +.+ .+|+++|+|+.|++.|+++... ..++.++++|+.+ .++.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la-~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~v~~~~~d~~~~~~~~~~~- 141 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVA-DIADKGIVYAIEYAPRIMRELLDACAE--------RENIIPILGDANKPQEYANIV- 141 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHH-HHTTTSEEEEEESCHHHHHHHHHHTTT--------CTTEEEEECCTTCGGGGTTTS-
T ss_pred CCCCCEEEEEcccCCHHHHHHH-HHcCCcEEEEEECCHHHHHHHHHHhhc--------CCCeEEEECCCCCcccccccC-
Confidence 4567799999999999999884 554 6899999999999999988632 2689999999988 6655
Q ss_pred CcceeeEechhhhhcChhh-HHHHHHHHHHhcccCcEEEEe
Q 024100 229 GRYDVIWVQWCIGHLTDDD-FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl~d~~-~~~~l~~~~r~LkpgG~liv~ 268 (272)
++||+|+ |++++++ ...+++++.+.|+|||.+++.
T Consensus 142 ~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 142 EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 6899999 4555552 247899999999999999873
No 110
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.54 E-value=3.1e-14 Score=131.16 Aligned_cols=108 Identities=20% Similarity=0.256 Sum_probs=88.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..+..+|||+|||+|.++..++ +.++ +++++|+ +.|++.|++++... ....+++|+++|+.+. .+ ..||
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~-~~~~~~~~~~~D~-~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~-~~-~~~D 251 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIA-RRAPHVSATVLEM-AGTVDTARSYLKDE-----GLSDRVDVVEGDFFEP-LP-RKAD 251 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-TTHHHHHHHHHHHT-----TCTTTEEEEECCTTSC-CS-SCEE
T ss_pred CccCcEEEEeCCcCcHHHHHHH-HhCCCCEEEEecC-HHHHHHHHHHHHhc-----CCCCceEEEeCCCCCC-CC-CCcc
Confidence 3466799999999999999885 5544 6778888 99999999987432 1234799999998763 23 2599
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
+|++.+++||+++++...+++++++.|+|||.+++.|..
T Consensus 252 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 252 AIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999999999999988889999999999999999988754
No 111
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.54 E-value=2.8e-14 Score=131.91 Aligned_cols=104 Identities=13% Similarity=0.151 Sum_probs=87.5
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..++ +.+ .+|+++|+|+ |++.|++++... +...+++++++|+++++++ ++||+|
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la-~~g~~~V~~vD~s~-~~~~a~~~~~~~-----~l~~~v~~~~~d~~~~~~~-~~~D~I 120 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAA-QAGARKIYAVEAST-MAQHAEVLVKSN-----NLTDRIVVIPGKVEEVSLP-EQVDII 120 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHH-HTTCSEEEEEECST-HHHHHHHHHHHT-----TCTTTEEEEESCTTTCCCS-SCEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHH-hCCCCEEEEECCHH-HHHHHHHHHHHc-----CCCCcEEEEEcchhhCCCC-CceeEE
Confidence 467799999999999999774 554 5999999996 999999887432 1235799999999998755 589999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
++.+.++|+..+....++.++++.|+|||.++.
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 999999999887777899999999999999874
No 112
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.54 E-value=2.8e-14 Score=122.90 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=81.6
Q ss_pred CCCCeeeEeecc-cchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CCCCcce
Q 024100 156 NQHLVALDCGSG-IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcG-tG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 232 (272)
.++.+|||+||| +|.++..++ +. ..+|+++|+|+.|++.|++++... ..+++++++|+..+. .++++||
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la-~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~fD 125 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAE-KFFNCKVTATEVDEEFFEYARRNIERN-------NSNVRLVKSNGGIIKGVVEGTFD 125 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHH-HHHCCEEEEEECCHHHHHHHHHHHHHT-------TCCCEEEECSSCSSTTTCCSCEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHH-HhcCCEEEEEECCHHHHHHHHHHHHHh-------CCCcEEEeCCchhhhhcccCcee
Confidence 467799999999 999999874 65 789999999999999999987542 227899999975442 2347999
Q ss_pred eeEechhhhhcChhh-----------------HHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDD-----------------FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~-----------------~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+++..+++..+.+ ...+++++.+.|+|||.+++.
T Consensus 126 ~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 126 VIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp EEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 999987765544321 358999999999999998763
No 113
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.54 E-value=6.2e-15 Score=127.90 Aligned_cols=106 Identities=15% Similarity=0.120 Sum_probs=81.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-C--CCCCcc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T--PETGRY 231 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~~f 231 (272)
+..+|||||||+|.++..+ ++.++ .|++||+|+.|++.|++++... ...++.|+++|+.++ + +++++|
T Consensus 34 ~~~~vLDiGcG~G~~~~~l-A~~~p~~~v~giD~s~~~l~~a~~~~~~~------~l~nv~~~~~Da~~~l~~~~~~~~~ 106 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAM-AKDRPEQDFLGIEVHSPGVGACLASAHEE------GLSNLRVMCHDAVEVLHKMIPDNSL 106 (218)
T ss_dssp CCCEEEEESCTTCHHHHHH-HHHCTTSEEEEECSCHHHHHHHHHHHHHT------TCSSEEEECSCHHHHHHHHSCTTCE
T ss_pred CCCeEEEEeeeChHHHHHH-HHHCCCCeEEEEEecHHHHHHHHHHHHHh------CCCcEEEEECCHHHHHHHHcCCCCh
Confidence 4568999999999999988 56655 5999999999999999987532 345799999998774 2 456799
Q ss_pred eeeEechhhhhcChhhH------HHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDF------VSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~------~~~l~~~~r~LkpgG~liv~E 269 (272)
|.|++++...+...... ..+++++.++|+|||.+++.-
T Consensus 107 d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 107 RMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred heEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 99999865433222111 159999999999999987653
No 114
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.53 E-value=3.3e-14 Score=122.57 Aligned_cols=101 Identities=10% Similarity=0.047 Sum_probs=75.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC---CCCCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPETG 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~ 229 (272)
+.++.+|||+|||+|.++..+ ++.. .+|+++|+|+.|++.+.+.... ..++.++++|+... .+..+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~l-a~~~~~~~V~gvD~s~~~l~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~~ 125 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHL-ADIVDEGIIYAVEYSAKPFEKLLELVRE--------RNNIIPLLFDASKPWKYSGIVE 125 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHH-HHHTTTSEEEEECCCHHHHHHHHHHHHH--------CSSEEEECSCTTCGGGTTTTCC
T ss_pred CCCCCEEEEECCcCCHHHHHH-HHHcCCCEEEEEECCHHHHHHHHHHHhc--------CCCeEEEEcCCCCchhhccccc
Confidence 456779999999999999977 4554 5899999999988766554321 23688888888763 22236
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+||+|+++. .++ .+...++++++++|||||.+++.
T Consensus 126 ~fD~V~~~~-~~~---~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 126 KVDLIYQDI-AQK---NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CEEEEEECC-CST---THHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEEec-cCh---hHHHHHHHHHHHHhCCCCEEEEE
Confidence 899999973 222 23335799999999999998875
No 115
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.53 E-value=2.5e-14 Score=132.41 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=84.8
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..++ +.+ .+|+++|+| +|++.|++++... ....+++++++|++++++++++||+|
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la-~~g~~~v~gvD~s-~~l~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~fD~I 137 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAA-KAGARKVIGIECS-SISDYAVKIVKAN-----KLDHVVTIIKGKVEEVELPVEKVDII 137 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHH-HTTCSEEEEEECS-THHHHHHHHHHHT-----TCTTTEEEEESCTTTCCCSSSCEEEE
T ss_pred CCCCEEEEEeccchHHHHHHH-HCCCCEEEEECcH-HHHHHHHHHHHHc-----CCCCcEEEEECcHHHccCCCCceEEE
Confidence 356799999999999999774 654 499999999 5999999987532 22346999999999987776899999
Q ss_pred EechhhhhcC-hhhHHHHHHHHHHhcccCcEEEE
Q 024100 235 WVQWCIGHLT-DDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 235 vs~~vl~hl~-d~~~~~~l~~~~r~LkpgG~liv 267 (272)
++.++.+++. ...+..++..+.++|+|||.++.
T Consensus 138 is~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 138 ISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 9987655542 24455899999999999999863
No 116
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.53 E-value=8.9e-15 Score=127.72 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=81.6
Q ss_pred CCCCeeeEeecccchHHHHHHH-hcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC---CCcc
Q 024100 156 NQHLVALDCGSGIGRITKNLLI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa-~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~f 231 (272)
.++.+|||+|||+|.++..++. ....+|+++|+|+.|++.|++++... ...+++++++|++++++. +++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL------QLENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH------TCSSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCEEEEeccHHHhcccccccCCc
Confidence 3567999999999999997742 23568999999999999999987532 234699999999877542 4689
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|++..+ .+ +..+++.+.++|+|||.+++..
T Consensus 143 D~V~~~~~----~~--~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 143 DIVTARAV----AR--LSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEEEECC----SC--HHHHHHHHGGGEEEEEEEEEEE
T ss_pred cEEEEecc----CC--HHHHHHHHHHhcCCCCEEEEEe
Confidence 99999763 23 4589999999999999998754
No 117
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.53 E-value=2.5e-14 Score=123.27 Aligned_cols=98 Identities=18% Similarity=0.136 Sum_probs=81.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++... . +++++++|+.+..+.+++||+|
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l-~~~~~~v~~vD~~~~~~~~a~~~~~~~-------~-~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALI-AEIVDKVVSVEINEKMYNYASKLLSYY-------N-NIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHH-HHHSSEEEEEESCHHHHHHHHHHHTTC-------S-SEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHH-HHHcCEEEEEeCCHHHHHHHHHHHhhc-------C-CeEEEECCcccccccCCCccEE
Confidence 456779999999999999977 466789999999999999999987431 2 7999999997733334689999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++|+.+ ++.+.|+|||.+++..
T Consensus 139 ~~~~~~~~~~~--------~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 139 VVWATAPTLLC--------KPYEQLKEGGIMILPI 165 (231)
T ss_dssp EESSBBSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred EECCcHHHHHH--------HHHHHcCCCcEEEEEE
Confidence 99999999863 5789999999988764
No 118
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.53 E-value=1.7e-14 Score=124.22 Aligned_cols=105 Identities=11% Similarity=0.243 Sum_probs=81.3
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD 232 (272)
+..+|||||||+|.++..++ +. ..++++||+|+.|++.|++++... ...++.++++|+.+++ +++++||
T Consensus 38 ~~~~vLDiGcG~G~~~~~la-~~~p~~~v~giD~s~~~l~~a~~~~~~~------~~~nv~~~~~d~~~l~~~~~~~~~d 110 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMA-KQNPDINYIGIELFKSVIVTAVQKVKDS------EAQNVKLLNIDADTLTDVFEPGEVK 110 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHH-HHCTTSEEEEECSCHHHHHHHHHHHHHS------CCSSEEEECCCGGGHHHHCCTTSCC
T ss_pred CCceEEEEecCCCHHHHHHH-HHCCCCCEEEEEechHHHHHHHHHHHHc------CCCCEEEEeCCHHHHHhhcCcCCcC
Confidence 45689999999999999884 55 458999999999999999987532 2357999999998754 4557899
Q ss_pred eeEechhhhhcChh------hHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDD------DFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~------~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.|++++...+.... ....+++++.++|+|||.+++.
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 99987643222110 0247999999999999998765
No 119
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.53 E-value=6.2e-14 Score=129.36 Aligned_cols=103 Identities=16% Similarity=0.202 Sum_probs=83.4
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
..++.+|||+|||+|.++..+ ++.+ .+|+++|+|+ |++.|++++... ....+++++++|++++++++++||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~l-a~~g~~~v~gvD~s~-~~~~a~~~~~~~-----~~~~~i~~~~~d~~~~~~~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFA-AKAGAKKVLGVDQSE-ILYQAMDIIRLN-----KLEDTITLIKGKIEEVHLPVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHH-HHTTCSEEEEEESST-HHHHHHHHHHHT-----TCTTTEEEEESCTTTSCCSCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHH-HHcCCCEEEEEChHH-HHHHHHHHHHHc-----CCCCcEEEEEeeHHHhcCCCCcEEE
Confidence 356779999999999999977 4654 4899999996 999999887532 1236899999999998776679999
Q ss_pred eEech---hhhhcChhhHHHHHHHHHHhcccCcEEE
Q 024100 234 IWVQW---CIGHLTDDDFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 234 Ivs~~---vl~hl~d~~~~~~l~~~~r~LkpgG~li 266 (272)
|++.+ .++|. ..+..++.++.+.|+|||.++
T Consensus 135 Ivs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMGYFLLFE--SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCBTTBTTT--CHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCchhhccCH--HHHHHHHHHHHhhcCCCcEEE
Confidence 99877 34443 344589999999999999987
No 120
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.53 E-value=1.4e-14 Score=123.92 Aligned_cols=107 Identities=16% Similarity=0.182 Sum_probs=79.9
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.++.+|||+|||+|.++..++ +. ..+|+++|+|+.|++.+.++..... ......+++|+++|++++++.+++ |.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la-~~~p~~~v~gvD~s~~~l~~~~~~a~~~~--~~~~~~~v~~~~~d~~~l~~~~~~-d~ 101 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVA-RQNPSRLVVALDADKSRMEKISAKAAAKP--AKGGLPNLLYLWATAERLPPLSGV-GE 101 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHH-HHCTTEEEEEEESCGGGGHHHHHHHTSCG--GGTCCTTEEEEECCSTTCCSCCCE-EE
T ss_pred cCCCEEEEecCCCCHHHHHHH-HHCCCCEEEEEECCHHHHHHHHHHHHHhh--hhcCCCceEEEecchhhCCCCCCC-CE
Confidence 456799999999999999884 65 4689999999999996433221100 012345899999999998876555 66
Q ss_pred eE---echhh--hhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 234 IW---VQWCI--GHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Iv---s~~vl--~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+ +...+ ||++++. .+|+++.++|+|||.+++.
T Consensus 102 v~~~~~~~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 102 LHVLMPWGSLLRGVLGSSP--EMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp EEEESCCHHHHHHHHTSSS--HHHHHHHHTEEEEEEEEEE
T ss_pred EEEEccchhhhhhhhccHH--HHHHHHHHHcCCCcEEEEE
Confidence 55 33344 3777777 9999999999999999874
No 121
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.53 E-value=2e-14 Score=126.14 Aligned_cols=112 Identities=11% Similarity=0.080 Sum_probs=80.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC-CC--CCCCc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT--PETGR 230 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~-~~--~~~~~ 230 (272)
.+..+|||||||+|.++..+ ++.+ ..|+|||+|+.|++.|++++...+........++.++++|+.+ ++ +++++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~l-a~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVEL-SPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHH-GGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHH-HHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 35568999999999999987 5664 4799999999999999887532110001134689999999987 44 45679
Q ss_pred ceeeEechhhhhcChhh------HHHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHLTDDD------FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~------~~~~l~~~~r~LkpgG~liv~ 268 (272)
||.|++++.-.+..... ...+|+++.++|+|||.|++.
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 99999765432211000 136999999999999998764
No 122
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.52 E-value=1.2e-14 Score=142.89 Aligned_cols=104 Identities=15% Similarity=0.133 Sum_probs=85.2
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC--CCCCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fDlI 234 (272)
++.+|||||||+|.++..| ++.+.+|+|||+|+.+|+.|+...... ...+++|.+++++++ ..++++||+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~l-a~~ga~V~giD~~~~~i~~a~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSL-ASKGATIVGIDFQQENINVCRALAEEN------PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp SCCEEEEETCTTSHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHTS------TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCeEEEECCCCcHHHHHH-HhCCCEEEEECCCHHHHHHHHHHHHhc------CCCceEEEECCHHHHhhhccCCCccEE
Confidence 5679999999999999988 688999999999999999999876421 234799999999887 3445789999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+|..+|+|++|++....+..+.+.|+++|..++
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 999999999988744555667777888775443
No 123
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.52 E-value=2.8e-14 Score=132.77 Aligned_cols=100 Identities=13% Similarity=0.307 Sum_probs=83.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
+.+..+|||||||+|.++..++ +.++ +++++|. +.|++.|++ ..+++|+.+|+.+ +.+. . |
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~p~-~-D 263 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIV-AKYPSINAINFDL-PHVIQDAPA------------FSGVEHLGGDMFD-GVPK-G-D 263 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCC-C-S
T ss_pred ccCCCEEEEeCCCcCHHHHHHH-HhCCCCEEEEEeh-HHHHHhhhh------------cCCCEEEecCCCC-CCCC-C-C
Confidence 4566899999999999999885 5544 6788899 888876643 2479999999987 4443 3 9
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
+|++.+++||+++++..++|++++++|+|||.+++.|.+
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 999999999999998889999999999999999998864
No 124
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.52 E-value=5.3e-14 Score=130.29 Aligned_cols=108 Identities=13% Similarity=0.185 Sum_probs=89.4
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcE--EEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEV--DLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v--~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
.....+|+|||||+|.++..++ +.++++ ++.|. +.+++.|++.+.. ....+++|..+|+.+.++ ..+|
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~-~~~p~~~~~~~dl-p~v~~~a~~~~~~------~~~~rv~~~~gD~~~~~~--~~~D 246 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECM-SLYPGCKITVFDI-PEVVWTAKQHFSF------QEEEQIDFQEGDFFKDPL--PEAD 246 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHH-HHCSSCEEEEEEC-HHHHHHHHHHSCC--------CCSEEEEESCTTTSCC--CCCS
T ss_pred cccCCeEEeeCCCCCHHHHHHH-HhCCCceeEeccC-HHHHHHHHHhhhh------cccCceeeecCccccCCC--CCce
Confidence 4456799999999999999884 777755 45565 8899999998753 235789999999976543 3589
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCCC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSLI 272 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~~ 272 (272)
+|++.++||+++|++..++|+++++.|+|||.+++.|.++
T Consensus 247 ~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 247 LYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred EEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 9999999999999998999999999999999999998764
No 125
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.52 E-value=4.2e-14 Score=132.23 Aligned_cols=107 Identities=20% Similarity=0.238 Sum_probs=87.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
..++.+|||+|||+|.++..+ ++.+. +|++||+| .|++.|++++... ....+++++++|+++++++ ++||+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~l-a~~g~~~V~gvD~s-~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~-~~~D~ 132 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWS-AQAGARKVYAVEAT-KMADHARALVKAN-----NLDHIVEVIEGSVEDISLP-EKVDV 132 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHH-HHTTCSEEEEEESS-TTHHHHHHHHHHT-----TCTTTEEEEESCGGGCCCS-SCEEE
T ss_pred cCCCCEEEEeccCcCHHHHHH-HhcCCCEEEEEccH-HHHHHHHHHHHHc-----CCCCeEEEEECchhhcCcC-CcceE
Confidence 456789999999999999977 46655 99999999 9999999987532 2235699999999998766 79999
Q ss_pred eEechhhhhcCh-hhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTD-DDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d-~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|++.++.+++.. ..+..+++.+.+.|+|||.++..+
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 999887666643 346689999999999999997654
No 126
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.52 E-value=2.6e-14 Score=121.82 Aligned_cols=86 Identities=19% Similarity=0.234 Sum_probs=72.3
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..+ ..+++++|+|+. ++++.++|+.++++++++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~---------------------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI----RNPVHCFDLASL---------------------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS---------------------STTEEESCTTSCSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC---------------------CceEEEeccccCCCCCCCEeEEE
Confidence 45679999999999999866 268999999886 24678899988877677999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++.++|| .+ ...+|+++.++|+|||.+++.+
T Consensus 121 ~~~~l~~-~~--~~~~l~~~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 121 FCLSLMG-TN--IRDFLEEANRVLKPGGLLKVAE 151 (215)
T ss_dssp EESCCCS-SC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eehhccc-cC--HHHHHHHHHHhCCCCeEEEEEE
Confidence 9999964 44 4499999999999999999875
No 127
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.52 E-value=8.8e-15 Score=125.14 Aligned_cols=103 Identities=11% Similarity=0.024 Sum_probs=81.2
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.++.+|||+|||+|-++..++ .. ..++.++|+|+.|++.+++++... +...++++ .|..... ++++||+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~-~~~p~a~~~A~Di~~~~leiar~~~~~~-----g~~~~v~~--~d~~~~~-~~~~~Dv 118 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQW-NENEKIIYHAYDIDRAEIAFLSSIIGKL-----KTTIKYRF--LNKESDV-YKGTYDV 118 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHH-CSSCCCEEEEECSCHHHHHHHHHHHHHS-----CCSSEEEE--ECCHHHH-TTSEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHH-hcCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCccEEE--ecccccC-CCCCcCh
Confidence 467899999999999999774 44 448999999999999999998542 11225555 6665443 3478999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|++..++||+.+.+ ..+.++.+.|+|||.||--+
T Consensus 119 VLa~k~LHlL~~~~--~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 119 VFLLKMLPVLKQQD--VNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEETCHHHHHHTT--CCHHHHHHTCEEEEEEEEEE
T ss_pred hhHhhHHHhhhhhH--HHHHHHHHHhCCCCEEEEeC
Confidence 99999999994444 67779999999999998765
No 128
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.52 E-value=3.6e-14 Score=130.69 Aligned_cols=105 Identities=18% Similarity=0.212 Sum_probs=82.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
+.+..+|||||||+|.++..++ +.++ +++++|. +.++. +++... .....+++|..+|+.+. .+ +||
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~--~~~~~~-----~~~~~~v~~~~~d~~~~--~p-~~D 249 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVL-REHPGLQGVLLDR-AEVVA--RHRLDA-----PDVAGRWKVVEGDFLRE--VP-HAD 249 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHH-HHCTTEEEEEEEC-HHHHT--TCCCCC-----GGGTTSEEEEECCTTTC--CC-CCS
T ss_pred ccCCceEEEECCccCHHHHHHH-HHCCCCEEEEecC-HHHhh--cccccc-----cCCCCCeEEEecCCCCC--CC-CCc
Confidence 4567899999999999999885 6555 5677888 44554 333221 12245799999999632 22 899
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
+|++.+++||+++++..++|++++++|+|||.+++.|.+
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 999999999999998889999999999999999998754
No 129
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.52 E-value=3.2e-14 Score=132.34 Aligned_cols=100 Identities=13% Similarity=0.270 Sum_probs=84.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..+..+|||||||+|.++..++ +.++ +++++|. +.|++.|++ ..+++|+.+|+.+ +.+. . |
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~D~~~-~~p~-~-D 261 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIA-AHYPTIKGVNFDL-PHVISEAPQ------------FPGVTHVGGDMFK-EVPS-G-D 261 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCC-C-S
T ss_pred ccCCCEEEEeCCCCCHHHHHHH-HHCCCCeEEEecC-HHHHHhhhh------------cCCeEEEeCCcCC-CCCC-C-C
Confidence 4466799999999999999885 5544 6788899 888876643 2479999999987 4444 3 9
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
+|++.+++||+++++..++|++++++|+|||.+++.|.+
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 999999999999999899999999999999999998864
No 130
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.51 E-value=9.4e-14 Score=127.42 Aligned_cols=103 Identities=15% Similarity=0.213 Sum_probs=83.1
Q ss_pred CCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
++.+|||+|||+|.++..+ ++.+ .+|+++|+| .|++.|++++... ....+++++++|++++++++++||+|+
T Consensus 38 ~~~~VLDiGcGtG~ls~~l-a~~g~~~v~~vD~s-~~~~~a~~~~~~~-----~~~~~i~~~~~d~~~~~~~~~~~D~Iv 110 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFA-AKHGAKHVIGVDMS-SIIEMAKELVELN-----GFSDKITLLRGKLEDVHLPFPKVDIII 110 (328)
T ss_dssp TTCEEEEETCTTSHHHHHH-HHTCCSEEEEEESS-THHHHHHHHHHHT-----TCTTTEEEEESCTTTSCCSSSCEEEEE
T ss_pred CCCEEEEecCccHHHHHHH-HHCCCCEEEEEChH-HHHHHHHHHHHHc-----CCCCCEEEEECchhhccCCCCcccEEE
Confidence 5669999999999999977 4654 489999999 6999999887532 223579999999999876657999999
Q ss_pred echhhhhcC-hhhHHHHHHHHHHhcccCcEEE
Q 024100 236 VQWCIGHLT-DDDFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 236 s~~vl~hl~-d~~~~~~l~~~~r~LkpgG~li 266 (272)
+.+..+++. ...+..++.++.+.|+|||.++
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 987655543 2345589999999999999987
No 131
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.51 E-value=2.1e-14 Score=133.50 Aligned_cols=99 Identities=10% Similarity=0.172 Sum_probs=82.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
+.+..+|||||||+|.++..++ +.++ +++++|+ +.|++.|++ ..+++|+.+|+.+ +++ . ||
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~-~~~~~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~-~-~D 269 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELII-SKYPLIKGINFDL-PQVIENAPP------------LSGIEHVGGDMFA-SVP-Q-GD 269 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCC-C-EE
T ss_pred cCCCCEEEEeCCCCcHHHHHHH-HHCCCCeEEEeCh-HHHHHhhhh------------cCCCEEEeCCccc-CCC-C-CC
Confidence 3466799999999999999885 6655 4566799 889876653 1369999999977 444 3 99
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+|++.++|||+++++...+|++++++|+|||.+++.|.
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 99999999999999888999999999999999998763
No 132
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.50 E-value=2.5e-14 Score=122.11 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=80.9
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCcceeeE
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fDlIv 235 (272)
++.+|||+|||+|.++..++++...+|+++|.|+.|++.|++++... ...+++++++|+.++ +...++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~------~~~~v~~~~~D~~~~~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL------KAGNARVVNSNAMSFLAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT------TCCSEEEECSCHHHHHSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEECCHHHHHhhcCCCCCEEE
Confidence 35699999999999999876555569999999999999999987542 225799999998774 33446899999
Q ss_pred echhhhhcChhhHHHHHHHHHH--hcccCcEEEEe
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKE--NIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r--~LkpgG~liv~ 268 (272)
++..++ .. ....+++.+.+ +|+|||.+++.
T Consensus 128 ~~~p~~-~~--~~~~~l~~l~~~~~L~pgG~l~i~ 159 (202)
T 2fpo_A 128 VDPPFR-RG--LLEETINLLEDNGWLADEALIYVE 159 (202)
T ss_dssp ECCSSS-TT--THHHHHHHHHHTTCEEEEEEEEEE
T ss_pred ECCCCC-CC--cHHHHHHHHHhcCccCCCcEEEEE
Confidence 987753 33 33478888876 49999998765
No 133
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.50 E-value=9.5e-14 Score=114.86 Aligned_cols=104 Identities=14% Similarity=0.203 Sum_probs=83.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..++ +.+.+|+++|+|+.+++.+++++... ....+++++++|+.+..+..++||+|
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~-~~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~D~v 104 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELA-GRVRRVYAIDRNPEAISTTEMNLQRH-----GLGDNVTLMEGDAPEALCKIPDIDIA 104 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHH-TTSSEEEEEESCHHHHHHHHHHHHHT-----TCCTTEEEEESCHHHHHTTSCCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHH-HhcCEEEEEECCHHHHHHHHHHHHHc-----CCCcceEEEecCHHHhcccCCCCCEE
Confidence 4567799999999999999884 66689999999999999999987532 12257899999987621222589999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++..+++| +..+++++.+.|+|||.+++..
T Consensus 105 ~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 105 VVGGSGGE-----LQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EESCCTTC-----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCchHH-----HHHHHHHHHHhcCCCcEEEEEe
Confidence 99988765 3589999999999999998754
No 134
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=4.6e-14 Score=120.28 Aligned_cols=99 Identities=13% Similarity=0.095 Sum_probs=80.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC---CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~---~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|.++..++ +.+ .+|+++|+|+.|++.|++++... ...++++.++|+....+..++|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~~~~~f 147 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTA-EIVGEDGLVVSIERIPELAEKAERTLRKL------GYDNVIVIVGDGTLGYEPLAPY 147 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHHCTTSEEEEEESCHHHHHHHHHHHHHH------TCTTEEEEESCGGGCCGGGCCE
T ss_pred CCCCCEEEEECCCccHHHHHHH-HHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCeEEEECCcccCCCCCCCe
Confidence 4567799999999999999885 544 68999999999999999987432 2346899999985443334689
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|++..+++|+. .++.+.|+|||.+++.
T Consensus 148 D~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 148 DRIYTTAAGPKIP--------EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp EEEEESSBBSSCC--------HHHHHTEEEEEEEEEE
T ss_pred eEEEECCchHHHH--------HHHHHHcCCCcEEEEE
Confidence 9999999999986 3679999999998765
No 135
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.50 E-value=3.9e-14 Score=129.06 Aligned_cols=100 Identities=19% Similarity=0.235 Sum_probs=82.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCc---EEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNE---VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~---v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|.++..+ ++.+.. |+++|+|+.|++.|++++... ...++++.++|+.+..+..++|
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~l-a~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------g~~~v~~~~~d~~~~~~~~~~f 145 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVM-SRVVGEKGLVVSVEYSRKICEIAKRNVERL------GIENVIFVCGDGYYGVPEFSPY 145 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHH-HHHHCTTCEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGGCCGGGCCE
T ss_pred CCCcCEEEEecCCchHHHHHH-HHhcCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCeEEEECChhhccccCCCe
Confidence 456789999999999999977 465555 999999999999999987532 2346999999998765445789
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|++..+++|+. +++.+.|+|||.+++..
T Consensus 146 D~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 146 DVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEEEECSBBSCCC--------HHHHHHEEEEEEEEEEB
T ss_pred EEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEE
Confidence 9999999999986 46788999999998753
No 136
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.50 E-value=6.7e-14 Score=121.77 Aligned_cols=101 Identities=15% Similarity=0.178 Sum_probs=81.6
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC--CCCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD 232 (272)
++.+|||+|||+|..+..++ +. ..+|+++|+|+.|++.|++++... ....+++++++|+.++.+ .+++||
T Consensus 71 ~~~~vLDiG~G~G~~~~~la-~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~fD 144 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFA-SISDDIHVTTIERNETMIQYAKQNLATY-----HFENQVRIIEGNALEQFENVNDKVYD 144 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHH-TTCTTCEEEEEECCHHHHHHHHHHHHHT-----TCTTTEEEEESCGGGCHHHHTTSCEE
T ss_pred CCCEEEEEeCchhHHHHHHH-HhCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEECCHHHHHHhhccCCcc
Confidence 46699999999999999885 53 569999999999999999988543 123489999999977633 246899
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|++.... .....+++++.+.|+|||.+++.
T Consensus 145 ~V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 145 MIFIDAAK-----AQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEEEETTS-----SSHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEcCcH-----HHHHHHHHHHHHhcCCCeEEEEe
Confidence 99977543 33558999999999999999873
No 137
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.49 E-value=2.8e-14 Score=118.01 Aligned_cols=106 Identities=11% Similarity=0.114 Sum_probs=80.9
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ....+++++++|+.++ +..+++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT-----KAENRFTLLKMEAERAIDCLTGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT-----TCGGGEEEECSCHHHHHHHBCSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCceEEEECcHHHhHHhhcCCCCEE
Confidence 356799999999999999885332469999999999999999987532 1224799999998774 2233579999
Q ss_pred EechhhhhcChhhHHHHHHHHH--HhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAK--ENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~--r~LkpgG~liv~E 269 (272)
+++..+++ .....+++.+. ++|+|||.+++..
T Consensus 105 ~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 105 FLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp EECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred EECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 99877643 22346777776 9999999988653
No 138
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.49 E-value=5.4e-14 Score=129.64 Aligned_cols=98 Identities=15% Similarity=0.291 Sum_probs=83.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.+..+|||||||+|.++..++ +.++ +++++|+ +.|++.|++. .+++|..+|+.+ +.+ .||+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~p--~~D~ 249 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIIC-ETFPKLKCIVFDR-PQVVENLSGS------------NNLTYVGGDMFT-SIP--NADA 249 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHH-HHCTTCEEEEEEC-HHHHTTCCCB------------TTEEEEECCTTT-CCC--CCSE
T ss_pred ccCceEEEeCCCccHHHHHHH-HHCCCCeEEEeeC-HHHHhhcccC------------CCcEEEeccccC-CCC--CccE
Confidence 456799999999999999885 5543 7999999 9998877541 359999999966 333 3999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhccc---CcEEEEecC
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIAR---SGTFLLSHS 270 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~Lkp---gG~liv~E~ 270 (272)
|++.+++||+++++...+|++++++|+| ||.+++.|.
T Consensus 250 v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred EEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 9999999999998888999999999999 999998874
No 139
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.49 E-value=3.9e-14 Score=121.96 Aligned_cols=104 Identities=11% Similarity=0.155 Sum_probs=81.1
Q ss_pred CCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CC-C----
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP-E---- 227 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~-~---- 227 (272)
++.+|||+|||+|..+..++ +. ..+|+++|+|+.|++.|++++... ....+++++++|+.++ +. .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la-~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~l~~~~~~~~ 131 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMA-RLLQPGARLLTMEINPDCAAITQQMLNFA-----GLQDKVTILNGASQDLIPQLKKKYD 131 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHH-TTSCTTCEEEEEESCHHHHHHHHHHHHHH-----TCGGGEEEEESCHHHHGGGTTTTSC
T ss_pred CCCEEEEECCCCCHHHHHHH-HhCCCCCEEEEEeCChHHHHHHHHHHHHc-----CCCCceEEEECCHHHHHHHHHHhcC
Confidence 45699999999999999884 53 458999999999999999987543 1234699999997543 21 1
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.++||+|++....++..+. ..++..+ +.|+|||.+++.+
T Consensus 132 ~~~fD~V~~d~~~~~~~~~--~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 132 VDTLDMVFLDHWKDRYLPD--TLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CCCCSEEEECSCGGGHHHH--HHHHHHT-TCCCTTCEEEESC
T ss_pred CCceEEEEEcCCcccchHH--HHHHHhc-cccCCCeEEEEeC
Confidence 1589999998877665333 3788888 9999999998754
No 140
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.48 E-value=9.4e-14 Score=117.51 Aligned_cols=99 Identities=13% Similarity=0.099 Sum_probs=80.4
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
++.+|||+|||+|.++..++ .. ..+++++|+|+.|++.|++++... ...+++++++|+.++++ .++||+|
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~-~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~-~~~~D~i 136 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLS-IVRPEAHFTLLDSLGKRVRFLRQVQHEL------KLENIEPVQSRVEEFPS-EPPFDGV 136 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHH-HHCTTSEEEEEESCHHHHHHHHHHHHHT------TCSSEEEEECCTTTSCC-CSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHH-HHCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCeEEEecchhhCCc-cCCcCEE
Confidence 35699999999999999885 54 459999999999999999987532 23459999999988763 4689999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++.+ .+ ...+++++.+.|+|||.+++..
T Consensus 137 ~~~~~----~~--~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 137 ISRAF----AS--LNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ECSCS----SS--HHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEecc----CC--HHHHHHHHHHhcCCCcEEEEEe
Confidence 98643 22 4489999999999999988763
No 141
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.48 E-value=6.7e-14 Score=121.61 Aligned_cols=102 Identities=15% Similarity=0.186 Sum_probs=80.8
Q ss_pred CCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCC-CceEEEEeCCCCCC--CCCCcce
Q 024100 158 HLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCVPLQDFT--PETGRYD 232 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~-~~v~~~~~d~~~~~--~~~~~fD 232 (272)
..+|||+|||+|..+..++... ..+|+++|+|+.|++.|++++... +.. .+++++++|+.++. ..+++||
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----g~~~~~i~~~~gda~~~l~~~~~~~fD 131 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA-----GYSPSRVRFLLSRPLDVMSRLANDSYQ 131 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT-----TCCGGGEEEECSCHHHHGGGSCTTCEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCcCcEEEEEcCHHHHHHHhcCCCcC
Confidence 3489999999999999885332 468999999999999999998643 122 58999999987653 2247999
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|++.... .....+++++.+.|+|||.+++.+
T Consensus 132 ~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 132 LVFGQVSP-----MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp EEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred eEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 99987653 234579999999999999998754
No 142
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.48 E-value=8.4e-14 Score=125.32 Aligned_cols=125 Identities=15% Similarity=0.157 Sum_probs=91.2
Q ss_pred hhHHHHHHHHHhccCCCccCCCCCeeeEeeccc--chHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCC
Q 024100 136 KGSEAFLQMLLSDRFPNARNNQHLVALDCGSGI--GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMH 211 (272)
Q Consensus 136 ~~s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGt--G~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~ 211 (272)
...+.|+...+..... ......|||||||+ +..+..++.+. ..+|++||.|+.||+.|++++... ..
T Consensus 60 ~~nr~fl~rav~~l~~---~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~------~~ 130 (277)
T 3giw_A 60 RANRDWMNRAVAHLAK---EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST------PE 130 (277)
T ss_dssp HHHHHHHHHHHHHHHH---TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC------SS
T ss_pred HHHHHHHHHHHHHhcc---ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC------CC
Confidence 4456777766553221 01235899999997 44445464443 458999999999999999998531 23
Q ss_pred CceEEEEeCCCCCCC----C--CCcce-----eeEechhhhhcChhh-HHHHHHHHHHhcccCcEEEEec
Q 024100 212 KATNFFCVPLQDFTP----E--TGRYD-----VIWVQWCIGHLTDDD-FVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 212 ~~v~~~~~d~~~~~~----~--~~~fD-----lIvs~~vl~hl~d~~-~~~~l~~~~r~LkpgG~liv~E 269 (272)
.+++|+++|+.++.. + .+.|| .|+++.+|||+++.+ ...+++++.+.|+|||+|++++
T Consensus 131 ~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 131 GRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp SEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred CcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 479999999987521 0 13455 588999999999865 4689999999999999999874
No 143
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.48 E-value=2.1e-14 Score=117.29 Aligned_cols=101 Identities=18% Similarity=0.202 Sum_probs=78.8
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD 232 (272)
++.+|||+|||+|.++..+ ++.++.|+++|+|+.|++.|++++... .. +++++++|+.++.+ ..++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l-~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~-~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEA-ASEGWEAVLVEKDPEAVRLLKENVRRT------GL-GARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHH-HHTTCEEEEECCCHHHHHHHHHHHHHH------TC-CCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHH-HHCCCeEEEEeCCHHHHHHHHHHHHHc------CC-ceEEEeccHHHHHHhhhccCCceE
Confidence 4569999999999999988 577778999999999999999987532 12 78999999876421 123799
Q ss_pred eeEechhhhhcChhhHHHHHHHHH--HhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAK--ENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~--r~LkpgG~liv~E 269 (272)
+|+++.+++ .+.+ .+++.+. ++|+|||.+++.-
T Consensus 113 ~i~~~~~~~--~~~~--~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 113 VAFMAPPYA--MDLA--ALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp EEEECCCTT--SCTT--HHHHHHHHHTCEEEEEEEEEEE
T ss_pred EEEECCCCc--hhHH--HHHHHHHhhcccCCCcEEEEEe
Confidence 999998765 3333 5666666 9999999987653
No 144
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.48 E-value=7.5e-14 Score=123.28 Aligned_cols=108 Identities=16% Similarity=0.060 Sum_probs=83.7
Q ss_pred CC-CCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCc
Q 024100 155 NN-QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGR 230 (272)
Q Consensus 155 ~~-~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~ 230 (272)
.. ++.+|||+|||+|.++..+ ++.++ +|+++|+++.|++.|++++... ....+++++++|+.++. +++++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~l-a~~~~~~v~gvDi~~~~~~~a~~n~~~~-----~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLL-STRTKAKIVGVEIQERLADMAKRSVAYN-----QLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHH-HTTCCCEEEEECCSHHHHHHHHHHHHHT-----TCTTTEEEECSCGGGGGGTSCTTC
T ss_pred CCCCCCEEEEcCCchhHHHHHH-HHhcCCcEEEEECCHHHHHHHHHHHHHC-----CCcccEEEEECcHHHhhhhhccCC
Confidence 34 6779999999999999977 46655 9999999999999999987542 12346999999998875 23579
Q ss_pred ceeeEechhhhhc------------------ChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHL------------------TDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl------------------~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
||+|+++-.+.+. ....+..+++.+.+.|+|||.+++.
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 9999997544322 1134568999999999999998764
No 145
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.48 E-value=9.4e-14 Score=121.75 Aligned_cols=110 Identities=13% Similarity=0.085 Sum_probs=83.0
Q ss_pred CCCeeeEeecccchHHHHHHHhc----CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCc-------------------
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY----FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA------------------- 213 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~----~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~------------------- 213 (272)
++.+|||+|||+|.++..++ +. ..+|+++|+|+.|++.|++++...... .....
T Consensus 51 ~~~~vLD~gcGsG~~~~~la-~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLG-LLHRRSLRQVIASDVDPAPLELAAKNLALLSPA--GLTARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHH-HHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHH--HHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHH-HHhccCCCeEEEEECCHHHHHHHHHHHHHhhhc--cccccchhhhhhhhhcccccchhh
Confidence 56799999999999999885 44 458999999999999999876431000 00001
Q ss_pred ------eE-------------EEEeCCCCCCC-----CCCcceeeEechhhhhcCh-------hhHHHHHHHHHHhcccC
Q 024100 214 ------TN-------------FFCVPLQDFTP-----ETGRYDVIWVQWCIGHLTD-------DDFVSFFKRAKENIARS 262 (272)
Q Consensus 214 ------v~-------------~~~~d~~~~~~-----~~~~fDlIvs~~vl~hl~d-------~~~~~~l~~~~r~Lkpg 262 (272)
++ |.++|+.+... ..++||+|+++..+++..+ .....+++++.++|+||
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 56 99999987542 2348999999987776654 44568999999999999
Q ss_pred cEEEEec
Q 024100 263 GTFLLSH 269 (272)
Q Consensus 263 G~liv~E 269 (272)
|.+++..
T Consensus 208 G~l~~~~ 214 (250)
T 1o9g_A 208 AVIAVTD 214 (250)
T ss_dssp CEEEEEE
T ss_pred cEEEEeC
Confidence 9988753
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.48 E-value=2.1e-13 Score=120.97 Aligned_cols=110 Identities=15% Similarity=0.190 Sum_probs=81.9
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-------C
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------P 226 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-------~ 226 (272)
.++.+|||+|||+|.++..++ +.+ .+|++||+++.|++.|++++..... .....+++++++|+.++. +
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la-~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~--~~l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVA-ARLEKAEVTLYERSQEMAEFARRSLELPDN--AAFSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHH-HHCTTEEEEEEESSHHHHHHHHHHTTSGGG--TTTGGGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHH-HhCCCCeEEEEECCHHHHHHHHHHHHhhhh--CCCcceEEEEeCCHHHHhhhhhhhcc
Confidence 456799999999999999774 654 4899999999999999999753000 012236999999998872 3
Q ss_pred CCCcceeeEechhhh----------------hcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIG----------------HLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~----------------hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++++||+|+++-.+. |.....+..+++.+.+.|+|||.+++.
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 456899999983321 222334668999999999999998753
No 147
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.48 E-value=8.1e-14 Score=115.73 Aligned_cols=94 Identities=20% Similarity=0.116 Sum_probs=77.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+ +|+++|+|+.|++. . .+++++++|+.+. .++++||+|++
T Consensus 23 ~~~~vLD~GcG~G~~~~~l-~~~~-~v~gvD~s~~~~~~----~-----------~~~~~~~~d~~~~-~~~~~fD~i~~ 84 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQL-RKRN-TVVSTDLNIRALES----H-----------RGGNLVRADLLCS-INQESVDVVVF 84 (170)
T ss_dssp CSCEEEEETCTTCHHHHHH-TTTS-EEEEEESCHHHHHT----C-----------SSSCEEECSTTTT-BCGGGCSEEEE
T ss_pred CCCeEEEeccCccHHHHHH-HhcC-cEEEEECCHHHHhc----c-----------cCCeEEECChhhh-cccCCCCEEEE
Confidence 4569999999999999977 5777 99999999999987 1 2578999999874 33479999999
Q ss_pred chhhhhcChh-------hHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDD-------DFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~-------~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+..+++.++. +...+++++.+.| |||.+++.+
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 9998876554 3347899999999 999998754
No 148
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.48 E-value=1.6e-13 Score=120.96 Aligned_cols=92 Identities=14% Similarity=0.086 Sum_probs=78.5
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
++.+|||+|||+|.++..++ +. +.+|+++|+|+.|++.|+++. .++.+..+|++++++.+++||+|
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~-~~~~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v 152 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFA-DALPEITTFGLDVSKVAIKAAAKRY-----------PQVTFCVASSHRLPFSDTSMDAI 152 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHH-HTCTTSEEEEEESCHHHHHHHHHHC-----------TTSEEEECCTTSCSBCTTCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHH-HhCCCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcchhhCCCCCCceeEE
Confidence 56799999999999999885 54 569999999999999999874 35789999999887777899999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++.++. .+++++.++|+|||.+++..
T Consensus 153 ~~~~~~---------~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 153 IRIYAP---------CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp EEESCC---------CCHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCh---------hhHHHHHHhcCCCcEEEEEE
Confidence 987652 36899999999999988764
No 149
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.47 E-value=3e-14 Score=118.19 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=80.3
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCcc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRY 231 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~f 231 (272)
.++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ....+++++++|+.++.. .+++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAIT-----KEPEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH-----TCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHh-----CCCcceEEEECcHHHHHHHHHhcCCCC
Confidence 356799999999999999885433469999999999999999987532 112479999999876432 14689
Q ss_pred eeeEechhhhhcChhhHHHHHHHH--HHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRA--KENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~--~r~LkpgG~liv~ 268 (272)
|+|+++..+++ .+. ..+++.+ .++|+|||.+++.
T Consensus 118 D~i~~~~~~~~-~~~--~~~~~~l~~~~~L~~gG~l~~~ 153 (187)
T 2fhp_A 118 DLVLLDPPYAK-QEI--VSQLEKMLERQLLTNEAVIVCE 153 (187)
T ss_dssp EEEEECCCGGG-CCH--HHHHHHHHHTTCEEEEEEEEEE
T ss_pred CEEEECCCCCc-hhH--HHHHHHHHHhcccCCCCEEEEE
Confidence 99999988543 222 2566666 7889999998764
No 150
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.47 E-value=2.2e-14 Score=118.95 Aligned_cols=89 Identities=8% Similarity=0.095 Sum_probs=76.3
Q ss_pred cCCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC---CCCc
Q 024100 154 RNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGR 230 (272)
Q Consensus 154 ~~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~ 230 (272)
+..++.+|||+|||. | .+|+|+.|++.|+++.. .++++.++|++++++ ++++
T Consensus 9 g~~~g~~vL~~~~g~--------------v-~vD~s~~ml~~a~~~~~----------~~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS--------------S-PVEALKGLVDKLQALTG----------NEGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp TCCTTSEEEEEECTT--------------S-CHHHHHHHHHHHHHHTT----------TTSEEEEEEGGGGGGGCCCSSC
T ss_pred CCCCCCEEEEecCCc--------------e-eeeCCHHHHHHHHHhcc----------cCcEEEEechhcCccccCCCCC
Confidence 356788999999996 1 38999999999999862 248999999998876 5679
Q ss_pred ceeeEechhhhhc-ChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 231 YDVIWVQWCIGHL-TDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 231 fDlIvs~~vl~hl-~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
||+|++++++||+ ++.+ .+|++++++|+|||.+++.+
T Consensus 64 fD~V~~~~~l~~~~~~~~--~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSA--EILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEEEEECCSTTCCCCCCH--HHHHHHHHHEEEEEEEEEEE
T ss_pred EeEEEECChhhhcccCHH--HHHHHHHHHCCCCEEEEEEc
Confidence 9999999999999 7766 99999999999999998754
No 151
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.47 E-value=5.9e-13 Score=117.15 Aligned_cols=108 Identities=7% Similarity=-0.047 Sum_probs=83.2
Q ss_pred cCCCccCCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC--
Q 024100 149 RFPNARNNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-- 224 (272)
Q Consensus 149 ~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-- 224 (272)
.+...++.++.+|||+|||+|.++..++...++ .|+++|+|+.|++.++++... ..|+..+..|....
T Consensus 69 gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--------~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 69 GLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--------RRNIFPILGDARFPEK 140 (233)
T ss_dssp TCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--------CTTEEEEESCTTCGGG
T ss_pred chhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--------hcCeeEEEEeccCccc
Confidence 333345788999999999999999988433343 799999999999999988642 35888888888653
Q ss_pred -CCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 225 -TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 225 -~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+...+++|+|++... |..+. ..++.++++.|||||.+++.
T Consensus 141 ~~~~~~~vDvVf~d~~--~~~~~--~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 141 YRHLVEGVDGLYADVA--QPEQA--AIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp GTTTCCCEEEEEECCC--CTTHH--HHHHHHHHHHEEEEEEEEEE
T ss_pred cccccceEEEEEEecc--CChhH--HHHHHHHHHhccCCCEEEEE
Confidence 233468999987543 33334 48999999999999998875
No 152
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=2e-13 Score=112.22 Aligned_cols=99 Identities=12% Similarity=0.174 Sum_probs=81.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..++ +...+++++|+|+.|++.|++++... ...+++++++|+.+ ++++++||+|
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~~d~~~-~~~~~~~D~i 104 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIA-KRCKFVYAIDYLDGAIEVTKQNLAKF------NIKNCQIIKGRAED-VLDKLEFNKA 104 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHH-TTSSEEEEEECSHHHHHHHHHHHHHT------TCCSEEEEESCHHH-HGGGCCCSEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHH-hcCCeEEEEeCCHHHHHHHHHHHHHc------CCCcEEEEECCccc-cccCCCCcEE
Confidence 3466799999999999999884 67779999999999999999987532 22579999999877 3344689999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++.+ .+...+++++.+. |||.+++..
T Consensus 105 ~~~~~------~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 105 FIGGT------KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp EECSC------SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred EECCc------ccHHHHHHHHhhC--CCCEEEEEe
Confidence 99988 2244899999988 999998765
No 153
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.47 E-value=2.1e-13 Score=131.60 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=87.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..+ ++.+ .+|+++|+|+ |++.|++++... +...+++++.+|+.+++++ ++||+|
T Consensus 157 ~~~~~VLDiGcGtG~la~~l-a~~~~~~V~gvD~s~-~l~~A~~~~~~~-----gl~~~v~~~~~d~~~~~~~-~~fD~I 228 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFA-AQAGARKIYAVEAST-MAQHAEVLVKSN-----NLTDRIVVIPGKVEEVSLP-EQVDII 228 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHH-HHTTCSEEEEEECHH-HHHHHHHHHHHT-----TCTTTEEEEESCTTTCCCS-SCEEEE
T ss_pred cCCCEEEEecCcccHHHHHH-HHcCCCEEEEEEcHH-HHHHHHHHHHHc-----CCCCcEEEEECchhhCccC-CCeEEE
Confidence 45679999999999999977 4553 5899999998 999999887532 1235799999999987654 589999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+++..++|+.+++....+.++++.|+|||.++.
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 999998898877777888899999999999874
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.46 E-value=2e-13 Score=120.07 Aligned_cols=102 Identities=18% Similarity=0.127 Sum_probs=80.9
Q ss_pred CCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CC--CCCc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP--ETGR 230 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~--~~~~ 230 (272)
++.+|||||||+|..+..++ +. ..+|+++|+|+.|++.|++++... ....+++++++|+.++ +. ..++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la-~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----g~~~~v~~~~~d~~~~l~~~~~~~~ 136 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMA-RELPADGQLLTLEADAHHAQVARENLQLA-----GVDQRVTLREGPALQSLESLGECPA 136 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHH-TTSCTTCEEEEEECCHHHHHHHHHHHHHT-----TCTTTEEEEESCHHHHHHTCCSCCC
T ss_pred CCCEEEEecCCchHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEEcCHHHHHHhcCCCCC
Confidence 46799999999999999884 65 458999999999999999998543 1235799999998663 21 1248
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
||+|++.... .....+|+++.+.|+|||.+++.+
T Consensus 137 fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 137 FDLIFIDADK-----PNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp CSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred eEEEEECCch-----HHHHHHHHHHHHhcCCCeEEEEeC
Confidence 9999986542 345589999999999999888754
No 155
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.46 E-value=1.6e-13 Score=117.71 Aligned_cols=102 Identities=17% Similarity=0.097 Sum_probs=80.5
Q ss_pred CCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-----C
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-----T 228 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~-----~ 228 (272)
++.+|||+|||+|..+..++ +. ..+|+++|+++.+++.|++++... ....+++++++|+.+..+. .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la-~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~~ 131 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLA-RGLSSGGRVVTLEASEKHADIARSNIERA-----NLNDRVEVRTGLALDSLQQIENEKY 131 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHH-TTCCSSCEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEESCHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCccHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEEcCHHHHHHHHHhcCC
Confidence 46799999999999999884 65 458999999999999999988543 1234699999998654211 1
Q ss_pred CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++||+|++.... .....+|+++.+.|+|||.+++.+
T Consensus 132 ~~fD~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 132 EPFDFIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp CCCSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred CCcCEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 579999987663 335589999999999999887654
No 156
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.46 E-value=1e-13 Score=118.87 Aligned_cols=103 Identities=12% Similarity=0.088 Sum_probs=80.9
Q ss_pred CCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC--CC---
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ET--- 228 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~--~~--- 228 (272)
++.+|||+|||+|..+..++ +. ..+|+++|+|+.|++.|++++... ....+++++++|+.+..+ ..
T Consensus 64 ~~~~vLdiG~G~G~~~~~la-~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~~ 137 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMG-LALPKDGTLITCDVDEKSTALAKEYWEKA-----GLSDKIGLRLSPAKDTLAELIHAGQ 137 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHH-TTCCTTCEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEESCHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCcchHHHHHHH-HhCCCCCEEEEEeCCHHHHHHHHHHHHHC-----CCCCceEEEeCCHHHHHHHhhhccC
Confidence 45699999999999999884 65 568999999999999999988543 123469999999865421 11
Q ss_pred -CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 229 -GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 229 -~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
++||+|++.... .+...+++++.+.|+|||.+++.+-
T Consensus 138 ~~~fD~v~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 138 AWQYDLIYIDADK-----ANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp TTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCCccEEEECCCH-----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 689999976542 3455899999999999999987553
No 157
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.46 E-value=6.9e-14 Score=121.83 Aligned_cols=104 Identities=16% Similarity=0.185 Sum_probs=74.2
Q ss_pred CCCCeeeEeecccchHHHHHHHh-cCCcEEEEeCC-HHHHHHH---HHhccccCCCCCCCCCceEEEEeCCCCCCCC-CC
Q 024100 156 NQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPV-SHFLDAA---RESLAPENHMAPDMHKATNFFCVPLQDFTPE-TG 229 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~-~~~~v~~vD~S-~~mld~A---~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 229 (272)
.++.+|||||||+|.++..++.. ....|++||+| +.|++.| +++... ....++.|.++|+++++.. .+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~------~~~~~v~~~~~d~~~l~~~~~d 96 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSK------GGLSNVVFVIAAAESLPFELKN 96 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGG------TCCSSEEEECCBTTBCCGGGTT
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHH------cCCCCeEEEEcCHHHhhhhccC
Confidence 35679999999999999987422 24579999999 7888877 655432 1345799999999988531 13
Q ss_pred cceeeEechhhhh----c-ChhhHHHHHHHHHHhcccCcEEEE
Q 024100 230 RYDVIWVQWCIGH----L-TDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 230 ~fDlIvs~~vl~h----l-~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
.+|.|++++...+ . .+. ..+|++++++|||||.+++
T Consensus 97 ~v~~i~~~~~~~~~~~~~~~~~--~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 97 IADSISILFPWGTLLEYVIKPN--RDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp CEEEEEEESCCHHHHHHHHTTC--HHHHHHHHTTEEEEEEEEE
T ss_pred eEEEEEEeCCCcHHhhhhhcch--HHHHHHHHHhcCCCcEEEE
Confidence 5666665543221 1 122 3689999999999999987
No 158
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.46 E-value=1.9e-13 Score=121.80 Aligned_cols=102 Identities=14% Similarity=0.131 Sum_probs=83.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|.++..++ +. ..+|+++|+|+.+++.|++++... ....+++++++|+.+. +++++|
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la-~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~g~~~v~~~~~d~~~~-~~~~~f 180 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYIL-YALNGKGTLTVVERDEDNLKKAMDNLSEF-----YDIGNVRTSRSDIADF-ISDQMY 180 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHHTTSSEEEEECSCHHHHHHHHHHHHTT-----SCCTTEEEECSCTTTC-CCSCCE
T ss_pred CCCcCEEEEecCCCCHHHHHHH-HHcCCCCEEEEEECCHHHHHHHHHHHHhc-----CCCCcEEEEECchhcc-CcCCCc
Confidence 4567799999999999999885 54 569999999999999999987431 0135799999999874 344689
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
|+|++ |+++++ .+++++.+.|+|||.+++...
T Consensus 181 D~Vi~-----~~~~~~--~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 181 DAVIA-----DIPDPW--NHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EEEEE-----CCSCGG--GSHHHHHHTEEEEEEEEEEES
T ss_pred cEEEE-----cCcCHH--HHHHHHHHHcCCCCEEEEEeC
Confidence 99998 566666 899999999999999987653
No 159
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.45 E-value=8e-14 Score=123.30 Aligned_cols=100 Identities=13% Similarity=0.037 Sum_probs=81.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC---CCc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGR 230 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~ 230 (272)
.++.+|||+|||+|..+..+ +.. ..+|+++|+|+.|++.|++++... ...+++++++|++++.+. .++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~l-a~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~l~~v~~~~~d~~~~~~~~~~~~~ 151 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPL-KIVRPELELVLVDATRKKVAFVERAIEVL------GLKGARALWGRAEVLAREAGHREA 151 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHH-HHHCTTCEEEEEESCHHHHHHHHHHHHHH------TCSSEEEEECCHHHHTTSTTTTTC
T ss_pred CCCCEEEEEcCCCCHHHHHH-HHHCCCCEEEEEECCHHHHHHHHHHHHHh------CCCceEEEECcHHHhhcccccCCC
Confidence 45679999999999999977 454 458999999999999999987543 234699999999887643 368
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
||+|++..+ . ++..+++.+.+.|+|||.++..
T Consensus 152 fD~I~s~a~----~--~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 152 YARAVARAV----A--PLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp EEEEEEESS----C--CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ceEEEECCc----C--CHHHHHHHHHHHcCCCeEEEEE
Confidence 999999754 2 2448999999999999988764
No 160
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.45 E-value=3.1e-13 Score=117.09 Aligned_cols=102 Identities=13% Similarity=-0.031 Sum_probs=78.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC---CCCCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPETG 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~ 229 (272)
+.++.+|||+|||+|.++..++... ..+|+++|+|+.|++.+.++... ..++.++++|+.+. +..++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--------RTNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------CTTEEEECSCTTCGGGGGGGCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------cCCeEEEEcccCChhhhcccCC
Confidence 4567899999999999999885433 26899999999988877766532 15799999999873 33456
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+||+|++... . ......++.++.+.|+|||.+++.
T Consensus 147 ~~D~V~~~~~--~--~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 147 MVDVIFADVA--Q--PDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CEEEEEECCC--C--TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCC--C--ccHHHHHHHHHHHHcCCCeEEEEE
Confidence 8999999655 1 222346789999999999998873
No 161
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=1.6e-14 Score=121.94 Aligned_cols=103 Identities=14% Similarity=0.048 Sum_probs=62.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-----
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET----- 228 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~----- 228 (272)
.++.+|||+|||+|.++..++ +.++ +++++|+|+.|++.|++++... ..+++++++|+.+ ++++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------~~~~~~~~~d~~~-~~~~~~~~~ 99 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIA-LACPGVSVTAVDLSMDALAVARRNAERF-------GAVVDWAAADGIE-WLIERAERG 99 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHH-HHCTTEEEEEEECC--------------------------CCHHHHHH-HHHHHHHTT
T ss_pred CCCCEEEEecCCHhHHHHHHH-HhCCCCeEEEEECCHHHHHHHHHHHHHh-------CCceEEEEcchHh-hhhhhhhcc
Confidence 467799999999999999885 6543 8999999999999999887432 1168888888876 3233
Q ss_pred CcceeeEechhh------hhcChhhH------------------HHHHHHHHHhcccCcE-EEE
Q 024100 229 GRYDVIWVQWCI------GHLTDDDF------------------VSFFKRAKENIARSGT-FLL 267 (272)
Q Consensus 229 ~~fDlIvs~~vl------~hl~d~~~------------------~~~l~~~~r~LkpgG~-liv 267 (272)
++||+|+++..+ +|++.... ..+++++.++|+|||. +++
T Consensus 100 ~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 100 RPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp CCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred CcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 689999996443 33332211 5899999999999999 444
No 162
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.44 E-value=2e-13 Score=116.36 Aligned_cols=101 Identities=13% Similarity=0.197 Sum_probs=79.6
Q ss_pred CCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD 232 (272)
++.+|||+|||+|..+..++ +. ..+|+++|+|+.|++.|++++... ....+++++++|+.++ +..++ ||
T Consensus 56 ~~~~vLdiG~G~G~~~~~la-~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~-fD 128 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFA-RAISISSRVVMIDPDRDNVEHARRMLHDN-----GLIDRVELQVGDPLGIAAGQRD-ID 128 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHH-TTSCTTCEEEEEESCHHHHHHHHHHHHHH-----SGGGGEEEEESCHHHHHTTCCS-EE
T ss_pred CCCEEEEEcCCccHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHHHHHC-----CCCceEEEEEecHHHHhccCCC-CC
Confidence 45699999999999999884 55 459999999999999999987542 1234699999998664 33345 99
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|++.... .+...+++++.++|+|||.+++.+
T Consensus 129 ~v~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 129 ILFMDCDV-----FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEEETTT-----SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEEEcCCh-----hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 99987432 335589999999999999998743
No 163
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.44 E-value=7.3e-13 Score=114.02 Aligned_cols=102 Identities=11% Similarity=0.008 Sum_probs=79.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC---CCCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~ 229 (272)
+.++.+|||+|||+|.++..++... ..+|+++|+|+.|++.++++... ..+++++++|+.+.. ..++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--------~~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--------RRNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--------CTTEEEEECCTTCGGGGTTTCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--------cCCCEEEEccCCCcchhhcccC
Confidence 4567799999999999999885332 26899999999999999988742 258999999998732 1235
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+||+|++... + ......++.++.+.|+|||.+++.
T Consensus 143 ~~D~v~~~~~--~--~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVA--Q--PTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCC--S--TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC--C--HhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999997655 1 122235699999999999998764
No 164
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.44 E-value=2.8e-13 Score=117.19 Aligned_cols=102 Identities=13% Similarity=0.189 Sum_probs=82.4
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCC--CCcc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPE--TGRY 231 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~--~~~f 231 (272)
++.+|||+|||+|..+..++ +. ..+|+++|+|+.+++.|++++... ....+++++++|+.+. +.. +++|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la-~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~~f 127 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMA-QALPEATIVSIERDERRYEEAHKHVKAL-----GLESRIELLFGDALQLGEKLELYPLF 127 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHH-HHCTTCEEEEECCCHHHHHHHHHHHHHT-----TCTTTEEEECSCGGGSHHHHTTSCCE
T ss_pred CCCEEEEecCCCcHHHHHHH-HHCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEECCHHHHHHhcccCCCc
Confidence 45699999999999999875 55 468999999999999999987542 1224699999998775 221 3689
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|++....+ +...+++++.+.|+|||.+++.+
T Consensus 128 D~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 128 DVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEET
T ss_pred cEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 9999988753 35589999999999999998864
No 165
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.44 E-value=2.7e-13 Score=121.54 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=81.4
Q ss_pred CCCeeeEeecccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
++.+|||+|||+|.++..++ +.+. +|+++|.|+.|++.|++++... ....+++|+++|+.++.+ +++||+|+
T Consensus 125 ~~~~VLDlgcG~G~~~~~la-~~~~~~V~~vD~s~~~~~~a~~n~~~n-----~~~~~v~~~~~D~~~~~~-~~~fD~Vi 197 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIA-VYGKAKVIAIEKDPYTFKFLVENIHLN-----KVEDRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHH-HHTCCEEEEECCCHHHHHHHHHHHHHT-----TCTTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred CCCEEEEecccCCHHHHHHH-HhCCCEEEEEECCHHHHHHHHHHHHHc-----CCCceEEEEECCHHHhcc-cCCccEEE
Confidence 56799999999999999884 6655 5999999999999999987532 123458999999999876 56999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++... +.. .++.++.++|+|||.+++.+
T Consensus 198 ~~~p~----~~~--~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 198 MGYVV----RTH--EFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp ECCCS----SGG--GGHHHHHHHEEEEEEEEEEE
T ss_pred ECCch----hHH--HHHHHHHHHCCCCeEEEEEE
Confidence 96542 233 79999999999999998754
No 166
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.44 E-value=2.6e-13 Score=118.47 Aligned_cols=103 Identities=18% Similarity=0.183 Sum_probs=83.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|.++..++ +. ..+|+++|+|+.+++.|++++.... ...++++.++|+.+.++++++|
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-----g~~~v~~~~~d~~~~~~~~~~~ 167 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLA-RAVGEKGLVESYEARPHHLAQAERNVRAFW-----QVENVRFHLGKLEEAELEEAAY 167 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHHCTTSEEEEEESCHHHHHHHHHHHHHHC-----CCCCEEEEESCGGGCCCCTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHH-HHhCCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCCCEEEEECchhhcCCCCCCc
Confidence 4567799999999999999885 54 5699999999999999999874310 1357999999998875555789
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
|+|++ +++++. .+++++.+.|+|||.+++...
T Consensus 168 D~v~~-----~~~~~~--~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 168 DGVAL-----DLMEPW--KVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp EEEEE-----ESSCGG--GGHHHHHHHEEEEEEEEEEES
T ss_pred CEEEE-----CCcCHH--HHHHHHHHhCCCCCEEEEEeC
Confidence 99998 345555 899999999999999987653
No 167
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.44 E-value=2.9e-13 Score=118.58 Aligned_cols=107 Identities=12% Similarity=0.172 Sum_probs=79.5
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCC--CCCceEEEEeCCCC-CC--CCC
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPD--MHKATNFFCVPLQD-FT--PET 228 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~--~~~~v~~~~~d~~~-~~--~~~ 228 (272)
.++.+|||||||+|.++..++ +.++ .|++||+|+.|++.|++++...+..... ...++.++++|+.+ ++ ++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la-~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLS-PAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHH-HHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHH-HhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 456799999999999999884 6553 6999999999999998876432100000 23579999999987 33 445
Q ss_pred CcceeeEechhhhhcChhhH-----------HHHHHHHHHhcccCcEEEEe
Q 024100 229 GRYDVIWVQWCIGHLTDDDF-----------VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl~d~~~-----------~~~l~~~~r~LkpgG~liv~ 268 (272)
+++|.|++.+ +++.. ..+++++.++|+|||.+++.
T Consensus 127 ~~~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 127 GQLSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TCEEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 7899998543 34321 37999999999999998874
No 168
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.43 E-value=2.6e-13 Score=118.69 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=82.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|.++..++ +. ..+|+++|+|+.+++.|++++... ....+++++++|+.+.. ++++|
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~-~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~-~~~~~ 163 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLA-NIVGPEGRVVSYEIREDFAKLAWENIKWA-----GFDDRVTIKLKDIYEGI-EEENV 163 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHHCTTSEEEEECSCHHHHHHHHHHHHHH-----TCTTTEEEECSCGGGCC-CCCSE
T ss_pred CCCCCEEEEecCCchHHHHHHH-HHhCCCeEEEEEecCHHHHHHHHHHHHHc-----CCCCceEEEECchhhcc-CCCCc
Confidence 4567899999999999999885 54 569999999999999999987542 12234999999998653 44689
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|+++ ++++. .+++++.+.|+|||.+++..
T Consensus 164 D~v~~~-----~~~~~--~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 164 DHVILD-----LPQPE--RVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp EEEEEC-----SSCGG--GGHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEC-----CCCHH--HHHHHHHHHcCCCCEEEEEE
Confidence 999983 44555 89999999999999998764
No 169
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.43 E-value=1.9e-13 Score=117.61 Aligned_cols=104 Identities=20% Similarity=0.200 Sum_probs=80.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC-------cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN-------EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-- 225 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~-------~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-- 225 (272)
+.++.+|||+|||+|.++..+ ++.+. +|+++|+|+.+++.|++++...... .....+++++++|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~l-a~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCM-AIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPE-LLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHH-HHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGG-GGSSTTEEEEECCGGGCCHH
T ss_pred CCCCCEEEEECCCCCHHHHHH-HHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcc-ccccCCEEEEECChHhcccc
Confidence 346679999999999999977 46543 9999999999999999987532100 000357999999987754
Q ss_pred --CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 --PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 --~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+..++||+|++..+++|+ ++++.+.|+|||.+++.
T Consensus 156 ~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIP 192 (227)
T ss_dssp HHHHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEE
Confidence 344689999999998765 36778999999998764
No 170
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.43 E-value=1.5e-13 Score=121.55 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=81.5
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..+ ++.+.+|+++|+|+.+++.|++++... ... ++++++|+.+. +++++||+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~l-a~~g~~v~gvDi~~~~v~~a~~n~~~~------~~~-v~~~~~d~~~~-~~~~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAA-EKLGGKALGVDIDPMVLPQAEANAKRN------GVR-PRFLEGSLEAA-LPFGPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHH-HHTTCEEEEEESCGGGHHHHHHHHHHT------TCC-CEEEESCHHHH-GGGCCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHH-HHhCCeEEEEECCHHHHHHHHHHHHHc------CCc-EEEEECChhhc-CcCCCCCEEE
Confidence 35679999999999999977 577779999999999999999987431 122 88999988663 2346899999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++...++ +..++.++.+.|+|||.++++.
T Consensus 190 ~n~~~~~-----~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 190 ANLYAEL-----HAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp EECCHHH-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCcHHH-----HHHHHHHHHHHcCCCCEEEEEe
Confidence 9877654 4589999999999999998764
No 171
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.42 E-value=3.8e-13 Score=122.08 Aligned_cols=111 Identities=15% Similarity=0.208 Sum_probs=79.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-CCCcce
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 232 (272)
..+.+|||||||+|.++..++ +. ..+|++||+|+.|++.|++++..... ..-..++++++.+|..++.. .+++||
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~-~~~~~~~V~~VDid~~vi~~ar~~~~~~~~-~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVT-RHKNVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHH-TCTTCCEEEEECSCTTHHHHHHHHCHHHHS-SCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCCEEEEEeCChhHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHhhhhccc-ccccCCceEEEEChHHHHHhhcCCCcc
Confidence 356799999999999999885 55 45899999999999999998753210 00124689999999887632 346899
Q ss_pred eeEechhhhhcChhhH--HHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDDF--VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~--~~~l~~~~r~LkpgG~liv~ 268 (272)
+|++...-...+...+ .++++.++++|+|||.+++.
T Consensus 160 vIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 9999665433223222 58999999999999998874
No 172
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.42 E-value=2.3e-13 Score=123.65 Aligned_cols=110 Identities=14% Similarity=0.169 Sum_probs=80.8
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC--CCCcc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRY 231 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~f 231 (272)
.++.+|||||||+|.++..++ +. ..+|++||+|+.|++.|++++..... ....++++++.+|+.++.. .+++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVL-RHGTVEHCDLVDIDGEVMEQSKQHFPQISR--SLADPRATVRVGDGLAFVRQTPDNTY 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHH-TCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHSSCTTCE
T ss_pred CCCCeEEEEcCCCCHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHHhccCCce
Confidence 356799999999999999885 55 45899999999999999998732100 0124679999999877643 25689
Q ss_pred eeeEechhhhhcChhhH--HHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTDDDF--VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~--~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|++....++.+...+ .+++++++++|+|||.+++.
T Consensus 171 DvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 171 DVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp EEEEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99999876655433333 48999999999999998874
No 173
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.42 E-value=1.6e-13 Score=122.82 Aligned_cols=104 Identities=13% Similarity=0.043 Sum_probs=74.4
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE--EeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~fD 232 (272)
+.++.+|||+|||+|.++..+ ++. .+|++||+|+ |+..+++.... ......++.|+ ++|+.+++ +++||
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~l-a~~-~~V~gvD~s~-m~~~a~~~~~~----~~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYA-ASR-PHVMDVRAYT-LGVGGHEVPRI----TESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHH-HTS-TTEEEEEEEC-CCCSSCCCCCC----CCBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCEEEEeCcCCCHHHHHH-HHc-CcEEEEECch-hhhhhhhhhhh----hhccCCCeEEEecccCHhHCC--CCCCc
Confidence 456789999999999999977 466 8999999998 64333221100 00112278999 89998875 46899
Q ss_pred eeEechhhhhcChhh-----HHHHHHHHHHhcccCc--EEEEe
Q 024100 233 VIWVQWCIGHLTDDD-----FVSFFKRAKENIARSG--TFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~-----~~~~l~~~~r~LkpgG--~liv~ 268 (272)
+|+|..+ ++..++. ...+|..+.++|+||| .+++.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 9999877 4443321 1248999999999999 88764
No 174
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.42 E-value=4.5e-13 Score=116.31 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=78.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCC-CCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ-DFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD 232 (272)
..++.+|||+|||+|.++..++ +.+ .+|+++|+|+.+++.|++++... ...++++.++|+. .++ ...+||
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la-~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~v~~~~~d~~~~~~-~~~~fD 160 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALIS-EIVKTDVYTIERIPELVEFAKRNLERA------GVKNVHVILGDGSKGFP-PKAPYD 160 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHH-HHHCSCEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCGGGCCG-GGCCEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHH-HHhCCEEEEEeCCHHHHHHHHHHHHHc------CCCCcEEEECCcccCCC-CCCCcc
Confidence 3567799999999999999774 655 79999999999999999987532 2346899999973 222 223699
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|++..+++|+.+ ++.+.|+|||.+++.
T Consensus 161 ~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 161 VIIVTAGAPKIPE--------PLIEQLKIGGKLIIP 188 (235)
T ss_dssp EEEECSBBSSCCH--------HHHHTEEEEEEEEEE
T ss_pred EEEECCcHHHHHH--------HHHHhcCCCcEEEEE
Confidence 9999999988764 578999999998765
No 175
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.42 E-value=2.8e-13 Score=125.05 Aligned_cols=97 Identities=18% Similarity=0.358 Sum_probs=81.4
Q ss_pred CCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
...+|||||||+|.++..++ +.++ +++++|+ +.|++.|++ ..+++|..+|+.+ +.+ .||+|
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~--~~D~v 255 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIH-EIFPHLKCTVFDQ-PQVVGNLTG------------NENLNFVGGDMFK-SIP--SADAV 255 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHH-HHCTTSEEEEEEC-HHHHSSCCC------------CSSEEEEECCTTT-CCC--CCSEE
T ss_pred CCCEEEEECCCcCHHHHHHH-HHCCCCeEEEecc-HHHHhhccc------------CCCcEEEeCccCC-CCC--CceEE
Confidence 45699999999999999885 6555 6788899 788866543 1359999999977 443 49999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhccc---CcEEEEecC
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIAR---SGTFLLSHS 270 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~Lkp---gG~liv~E~ 270 (272)
+++++|||+++++..++|++++++|+| ||.+++.|.
T Consensus 256 ~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 256 LLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred EEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 999999999998888999999999999 999998774
No 176
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.41 E-value=1.2e-12 Score=117.25 Aligned_cols=109 Identities=10% Similarity=0.071 Sum_probs=80.3
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC-cEEEEeC-CHHHHHHHHHhccccCCCCCCCC----CceEEEEeCCCCCC--C-
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEP-VSHFLDAARESLAPENHMAPDMH----KATNFFCVPLQDFT--P- 226 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~-~v~~vD~-S~~mld~A~~~l~~~~~~~~~~~----~~v~~~~~d~~~~~--~- 226 (272)
.++.+|||+|||+|.++..+ ++.+. +|+++|+ |+.|++.|++++..-........ .++++...++.+.. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~-a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVA-FLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHH-HHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHH-HHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 35679999999999999976 56655 8999999 89999999998721000000011 36888877765531 1
Q ss_pred ---CCCcceeeEechhhhhcChhhHHHHHHHHHHhcc---c--CcEEEE
Q 024100 227 ---ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIA---R--SGTFLL 267 (272)
Q Consensus 227 ---~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~Lk---p--gG~liv 267 (272)
.+++||+|+++.+++|..+. ..+++.+.++|+ | ||.+++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~~--~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQAH--DALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGGH--HHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred hhccCCCCCEEEEeCcccChHHH--HHHHHHHHHHhcccCCCCCCEEEE
Confidence 24689999999999886544 499999999999 9 997654
No 177
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.41 E-value=6.8e-13 Score=118.15 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=81.7
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|++++... ...+++++++|+.+.. ++++||+|+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~------~~~~v~~~~~d~~~~~-~~~~fD~Iv 181 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL------AIKNIHILQSDWFSAL-AGQQFAMIV 181 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH------TCCSEEEECCSTTGGG-TTCCEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEEcchhhhc-ccCCccEEE
Confidence 45699999999999999885333 458999999999999999987532 2237999999997743 246899999
Q ss_pred ech-------------hhhhcCh----------hhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQW-------------CIGHLTD----------DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~-------------vl~hl~d----------~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++. +++|-+. .....+++++.+.|+|||.+++.
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 983 4444331 23568999999999999998875
No 178
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.41 E-value=7.6e-14 Score=122.79 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=81.5
Q ss_pred CCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
++.+|||+|||+|..+..++ +. ..+|+++|+|+.|++.|++++... ....+++++++|+.++.+.
T Consensus 60 ~~~~VLDiG~G~G~~t~~la-~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----g~~~~i~~~~gda~~~l~~~~~~~~ 133 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMS-LALPDDGQVITCDINEGWTKHAHPYWREA-----KQEHKIKLRLGPALDTLHSLLNEGG 133 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHH-HTSCTTCEEEEEECCCSSCCCSHHHHHHT-----TCTTTEEEEESCHHHHHHHHHHHHC
T ss_pred CcCEEEEeeCCcCHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEEcCHHHHHHHHhhccC
Confidence 45699999999999999884 54 458999999999999999988643 1235899999998765322
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++||+|++.... .....+|+++.+.|+|||.+++.+
T Consensus 134 ~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 134 EHQFDFIFIDADK-----TNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp SSCEEEEEEESCG-----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCEeEEEEcCCh-----HHhHHHHHHHHHhcCCCeEEEEEC
Confidence 3689999987652 345589999999999999998754
No 179
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.41 E-value=2.2e-13 Score=122.66 Aligned_cols=113 Identities=10% Similarity=0.030 Sum_probs=78.5
Q ss_pred HHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE--Ee
Q 024100 142 LQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CV 219 (272)
Q Consensus 142 L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~--~~ 219 (272)
+..+..+. .+.++.+|||+|||+|.++..+ ++. .+|++||+|+ |+..++++... ......++.|+ ++
T Consensus 71 L~~i~~~~----~~~~g~~VLDlGcGtG~~s~~l-a~~-~~V~gVD~s~-m~~~a~~~~~~----~~~~~~~v~~~~~~~ 139 (276)
T 2wa2_A 71 LAWIDERG----GVELKGTVVDLGCGRGSWSYYA-ASQ-PNVREVKAYT-LGTSGHEKPRL----VETFGWNLITFKSKV 139 (276)
T ss_dssp HHHHHHTT----SCCCCEEEEEESCTTCHHHHHH-HTS-TTEEEEEEEC-CCCTTSCCCCC----CCCTTGGGEEEECSC
T ss_pred HHHHHHcC----CCCCCCEEEEeccCCCHHHHHH-HHc-CCEEEEECch-hhhhhhhchhh----hhhcCCCeEEEeccC
Confidence 45555432 2456789999999999999977 466 7999999998 75443322100 01112378999 88
Q ss_pred CCCCCCCCCCcceeeEechhhhhcChhh-----HHHHHHHHHHhcccCc--EEEEe
Q 024100 220 PLQDFTPETGRYDVIWVQWCIGHLTDDD-----FVSFFKRAKENIARSG--TFLLS 268 (272)
Q Consensus 220 d~~~~~~~~~~fDlIvs~~vl~hl~d~~-----~~~~l~~~~r~LkpgG--~liv~ 268 (272)
|+.+++ +++||+|+|.++ ++..++. ...+|+.+.++|+||| .+++.
T Consensus 140 D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 140 DVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 998875 468999999887 4433321 1247899999999999 87764
No 180
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.41 E-value=3.3e-13 Score=117.45 Aligned_cols=102 Identities=6% Similarity=0.071 Sum_probs=80.3
Q ss_pred CCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-------
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~------- 226 (272)
++.+|||+|||+|..+..++ +. ..+|+++|+|+.+++.|++++... ....+++++++|+.+..+
T Consensus 60 ~~~~VLdiG~G~G~~~~~la-~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----g~~~~v~~~~~d~~~~~~~~~~~~~ 133 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFA-SALPEDGKILCCDVSEEWTNVARKYWKEN-----GLENKIFLKLGSALETLQVLIDSKS 133 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHH-HHSCTTCEEEEEESCHHHHHHHHHHHHHT-----TCGGGEEEEESCHHHHHHHHHHCSS
T ss_pred CcCEEEEEeCCCCHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCCEEEEECCHHHHHHHHHhhcc
Confidence 46699999999999999885 54 469999999999999999987542 122459999998755311
Q ss_pred --------C-C-CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 227 --------E-T-GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 227 --------~-~-~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+ + ++||+|++.... +....+|+++.+.|+|||.+++.+
T Consensus 134 ~~~~~~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 134 APSWASDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp CCGGGTTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 1 689999998654 335589999999999999998754
No 181
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.41 E-value=1.5e-13 Score=111.70 Aligned_cols=97 Identities=9% Similarity=0.137 Sum_probs=77.4
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--------
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------- 225 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-------- 225 (272)
.++.+|||+|||+|.++..++... ..+++++|+|+ |++. .++++.++|+.+.+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------~~~~~~~~d~~~~~~~~~~~~~ 83 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------VGVDFLQGDFRDELVMKALLER 83 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------TTEEEEESCTTSHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------CcEEEEEcccccchhhhhhhcc
Confidence 466799999999999999885442 36999999998 7522 36889999998865
Q ss_pred CCCCcceeeEechhhhhcChhh---------HHHHHHHHHHhcccCcEEEEec
Q 024100 226 PETGRYDVIWVQWCIGHLTDDD---------FVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~---------~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++++||+|+++.++++..+.. ...+++++.+.|+|||.+++..
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4557899999998887765541 1489999999999999998754
No 182
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.40 E-value=4.6e-13 Score=118.66 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=83.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhcccc-CCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++... . ....++++.++|+.+.++++++|
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g----~~~~~v~~~~~d~~~~~~~~~~~ 172 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG----QPPDNWRLVVSDLADSELPDGSV 172 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT----SCCTTEEEECSCGGGCCCCTTCE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC----CCCCcEEEEECchHhcCCCCCce
Confidence 4567799999999999999885333 569999999999999999987421 0 01357999999998876556789
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|++ +++++. .+++++.++|+|||.+++..
T Consensus 173 D~v~~-----~~~~~~--~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 173 DRAVL-----DMLAPW--EVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp EEEEE-----ESSCGG--GGHHHHHHHEEEEEEEEEEE
T ss_pred eEEEE-----CCcCHH--HHHHHHHHhCCCCCEEEEEe
Confidence 99998 444565 89999999999999998764
No 183
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.40 E-value=2.3e-13 Score=117.45 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=79.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC-------CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF-------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE 227 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~-------~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~ 227 (272)
+.++.+|||+|||+|.++..++.... .+|+++|+++.+++.|++++...... .....+++++++|+.+..+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS-MLDSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH-HHHHTSEEEEESCGGGCCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcc-ccCCCceEEEECCcccCCCc
Confidence 34667999999999999997753233 48999999999999999987431000 00024789999998763222
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.++||+|++..+++|+. +++.+.|+|||.+++.
T Consensus 161 ~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 161 NAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVP 193 (227)
T ss_dssp GCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEE
T ss_pred CCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEE
Confidence 36899999999998864 5679999999998764
No 184
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.40 E-value=1.5e-12 Score=112.82 Aligned_cols=103 Identities=19% Similarity=0.317 Sum_probs=83.0
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..++ +...+|+++|+|+.+++.|++++... ....++++...|+.+..+++++||+|
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~-~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~D~v 162 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLS-EVAGEVWTFEAVEEFYKTAQKNLKKF-----NLGKNVKFFNVDFKDAEVPEGIFHAA 162 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHSSEEEEECSCHHHHHHHHHHHHHT-----TCCTTEEEECSCTTTSCCCTTCBSEE
T ss_pred CCCCCEEEEeCCCccHHHHHHH-HhCCEEEEEecCHHHHHHHHHHHHHc-----CCCCcEEEEEcChhhcccCCCcccEE
Confidence 4567799999999999999885 44789999999999999999987432 12257899999998865244689999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+++ .+++. .+++++.+.|+|||.+++...
T Consensus 163 ~~~-----~~~~~--~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 163 FVD-----VREPW--HYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp EEC-----SSCGG--GGHHHHHHHBCTTCEEEEEES
T ss_pred EEC-----CcCHH--HHHHHHHHHcCCCCEEEEEeC
Confidence 973 44555 799999999999999987643
No 185
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.40 E-value=6.6e-13 Score=114.05 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=80.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc-C--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY-F--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~-~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|..+..++ +. . .+|+++|+|+.|++.|++++...... .....+++++++|+....+..++|
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la-~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~f 152 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFA-RMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT-LLSSGRVQLVVGDGRMGYAEEAPY 152 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHH-HHHCTTCEEEEEESCHHHHHHHHHHHHHHCTH-HHHTSSEEEEESCGGGCCGGGCCE
T ss_pred CCCCCEEEEEcCCcCHHHHHHH-HHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc-ccCCCcEEEEECCcccCcccCCCc
Confidence 3467799999999999999875 54 3 48999999999999999887431000 000247899999987654445689
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|++..+++++. +++.+.|+|||.+++..
T Consensus 153 D~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 153 DAIHVGAAAPVVP--------QALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEEEECSBBSSCC--------HHHHHTEEEEEEEEEEE
T ss_pred CEEEECCchHHHH--------HHHHHhcCCCcEEEEEE
Confidence 9999998886653 57789999999988753
No 186
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.40 E-value=8.2e-13 Score=125.91 Aligned_cols=110 Identities=15% Similarity=0.023 Sum_probs=81.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHH-------HHhccccCCCCCCCCCceEEEEeCCC-CC-
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAA-------RESLAPENHMAPDMHKATNFFCVPLQ-DF- 224 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A-------~~~l~~~~~~~~~~~~~v~~~~~d~~-~~- 224 (272)
+.++.+|||+|||+|.++..++.... ..|++||.|+.+++.| ++++.... ....+++++++|.. ..
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G----l~~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG----MRLNNVEFSLKKSFVDNN 315 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT----BCCCCEEEEESSCSTTCH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC----CCCCceEEEEcCcccccc
Confidence 45678999999999999998843333 4799999999999999 66653210 00258899987543 21
Q ss_pred CC--CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 225 TP--ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 225 ~~--~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
++ ..++||+|+++.++ +. ++...+|+++.+.|+|||.+++.+.+
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred ccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 11 13589999998776 32 45558999999999999999998765
No 187
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.39 E-value=5.7e-13 Score=119.11 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=83.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
+.++.+|||+|||+|.++..+ ++.++ +|+++|.|+.|++.|++++... ...++.++++|+.++ +..++||
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~l-a~~~~~~~V~~vD~s~~av~~a~~n~~~n------~l~~~~~~~~d~~~~-~~~~~~D 188 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPL-AKYSKPKLVYAIEKNPTAYHYLCENIKLN------KLNNVIPILADNRDV-ELKDVAD 188 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHH-HHHTCCSEEEEEECCHHHHHHHHHHHHHT------TCSSEEEEESCGGGC-CCTTCEE
T ss_pred cCCCCEEEEecCcCCHHHHHH-HHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCCEEEEECChHHc-CccCCce
Confidence 346679999999999999988 46654 9999999999999999987532 234788999999888 3356899
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+|++.... +.. .++.++.+.|+|||.++++.+
T Consensus 189 ~Vi~d~p~----~~~--~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 189 RVIMGYVH----KTH--KFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp EEEECCCS----SGG--GGHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCcc----cHH--HHHHHHHHHcCCCCEEEEEEc
Confidence 99998664 233 799999999999999987653
No 188
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.39 E-value=6.2e-13 Score=117.25 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=80.7
Q ss_pred CCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-------
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~------- 226 (272)
++.+|||||||+|..+..++ +. ..+|+++|+|+.|++.|++++... ....+++++++|+.++.+
T Consensus 79 ~~~~VLeiG~G~G~~~~~la-~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-----g~~~~i~~~~gda~~~l~~l~~~~~ 152 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATA-LAIPEDGKILAMDINKENYELGLPVIKKA-----GVDHKIDFREGPALPVLDEMIKDEK 152 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHH-HHSCTTCEEEEEESCCHHHHHHHHHHHHT-----TCGGGEEEEESCHHHHHHHHHHSGG
T ss_pred CcCEEEEeCCCcCHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCCeEEEECCHHHHHHHHHhccC
Confidence 45699999999999999885 54 468999999999999999988543 123579999999866421
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.+++||+|++.... .....+++++.+.|+|||.+++.+
T Consensus 153 ~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 153 NHGSYDFIFVDADK-----DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp GTTCBSEEEECSCS-----TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCCCEEEEEEcCch-----HHHHHHHHHHHHhCCCCeEEEEec
Confidence 14689999987542 335589999999999999987643
No 189
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.39 E-value=4.1e-13 Score=117.63 Aligned_cols=96 Identities=9% Similarity=0.014 Sum_probs=76.5
Q ss_pred CCCeeeEeecccchHHHHHHHhc------CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC---CCC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE 227 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~------~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~---~~~ 227 (272)
++.+|||||||+|..+..|+ +. ..+|++||+|+.|++.|+. + ..+++++++|+.++ +..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la-~~~~~~~~~~~V~gvD~s~~~l~~a~~-~----------~~~v~~~~gD~~~~~~l~~~ 148 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFR-DLTKIMGIDCQVIGIDRDLSRCQIPAS-D----------MENITLHQGDCSDLTTFEHL 148 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHH-HHHHHTTCCCEEEEEESCCTTCCCCGG-G----------CTTEEEEECCSSCSGGGGGG
T ss_pred CCCEEEEEeCCCCHHHHHHH-HhhhhcCCCCEEEEEeCChHHHHHHhc-c----------CCceEEEECcchhHHHHHhh
Confidence 35699999999999999774 54 5689999999999988862 1 25799999999885 332
Q ss_pred C-CcceeeEechhhhhcChhhHHHHHHHHHH-hcccCcEEEEec
Q 024100 228 T-GRYDVIWVQWCIGHLTDDDFVSFFKRAKE-NIARSGTFLLSH 269 (272)
Q Consensus 228 ~-~~fDlIvs~~vl~hl~d~~~~~~l~~~~r-~LkpgG~liv~E 269 (272)
. .+||+|++... |. +...+|.++.+ .|+|||.+++.+
T Consensus 149 ~~~~fD~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 149 REMAHPLIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSSCSSEEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred ccCCCCEEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 2 37999998765 42 44589999997 999999998854
No 190
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=8.6e-13 Score=121.00 Aligned_cols=105 Identities=17% Similarity=0.220 Sum_probs=79.9
Q ss_pred CCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCcceee
Q 024100 158 HLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVI 234 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fDlI 234 (272)
+.+|||||||+|.++..++... ..+|++||+++.|++.|++++... ...+++++.+|..++. ..+++||+|
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~------~~~rv~v~~~Da~~~l~~~~~~~fDvI 163 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP------RAPRVKIRVDDARMVAESFTPASRDVI 163 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC------CTTTEEEEESCHHHHHHTCCTTCEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc------CCCceEEEECcHHHHHhhccCCCCCEE
Confidence 3499999999999999886423 348999999999999999998531 3468999999987652 234689999
Q ss_pred EechhhhhcChhhH--HHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDF--VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~--~~~l~~~~r~LkpgG~liv~ 268 (272)
++....+.-....+ .+|+++|+++|+|||.+++.
T Consensus 164 i~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 164 IRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp EECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 98644322111111 47999999999999998764
No 191
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.38 E-value=1.3e-12 Score=110.26 Aligned_cols=94 Identities=16% Similarity=0.238 Sum_probs=72.6
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..++ +.+ .+|+++|+|+.|++.|++++. +++++++|+.+++ ++||+|
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~-~~~~~~v~~vD~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~---~~~D~v 114 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSY-LLGAESVTAFDIDPDAIETAKRNCG-----------GVNFMVADVSEIS---GKYDTW 114 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHH-HTTBSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCGGGCC---CCEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHH-HcCCCEEEEEECCHHHHHHHHHhcC-----------CCEEEECcHHHCC---CCeeEE
Confidence 356799999999999999874 554 469999999999999999861 6899999998864 589999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEE
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~li 266 (272)
+++..++|+.+.....+++++.+.+ |+.++
T Consensus 115 ~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~ 144 (200)
T 1ne2_A 115 IMNPPFGSVVKHSDRAFIDKAFETS--MWIYS 144 (200)
T ss_dssp EECCCC-------CHHHHHHHHHHE--EEEEE
T ss_pred EECCCchhccCchhHHHHHHHHHhc--CcEEE
Confidence 9999999987644457899999998 55443
No 192
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.36 E-value=1.7e-12 Score=112.93 Aligned_cols=102 Identities=10% Similarity=0.136 Sum_probs=79.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcC---CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC----CCCC-
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPET- 228 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~---~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~----~~~~- 228 (272)
++.+|||+|||+|..+..++ +.. .+|+++|+|+.+++.|++++... ....+++++++|+.+. +..+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la-~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----g~~~~i~~~~~d~~~~l~~l~~~~~ 145 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMA-LQLPPDGQIIACDQDPNATAIAKKYWQKA-----GVAEKISLRLGPALATLEQLTQGKP 145 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHH-TTSCTTCEEEEEESCHHHHHHHHHHHHHH-----TCGGGEEEEESCHHHHHHHHHTSSS
T ss_pred CCCEEEEecCCCCHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEEcCHHHHHHHHHhcCC
Confidence 45699999999999999885 553 48999999999999999987542 1234799999997542 1122
Q ss_pred -CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 229 -GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 229 -~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++||+|++.... .+...+++++.+.|+|||.+++.+
T Consensus 146 ~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 146 LPEFDLIFIDADK-----RNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp CCCEEEEEECSCG-----GGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CCCcCEEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEeC
Confidence 689999987552 345689999999999999998754
No 193
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.36 E-value=1.8e-12 Score=113.28 Aligned_cols=103 Identities=10% Similarity=0.093 Sum_probs=80.7
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-------C
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------E 227 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-------~ 227 (272)
++.+|||||||+|..+..++... ..+++++|+|+.+++.|++++... +...+++++++|+.++.+ +
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----g~~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA-----GVEHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-----TCGGGEEEEESCHHHHHHHHHHSTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEEcCHHHHHHHHHhccCC
Confidence 45699999999999999885332 469999999999999999988643 123479999999865421 1
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.++||+|++.... .....+++++.+.|+|||.+++.+
T Consensus 145 ~~~fD~I~~d~~~-----~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 145 EGSYDFGFVDADK-----PNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEECCch-----HHHHHHHHHHHHhcCCCeEEEEec
Confidence 4689999986432 345689999999999999987643
No 194
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.36 E-value=8e-13 Score=118.93 Aligned_cols=110 Identities=19% Similarity=0.262 Sum_probs=82.8
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CCCCcce
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 232 (272)
.++.+|||+|||+|.++..++ +. ..+|+++|+++.|++.|++++..... .-..++++++.+|+.++. ..+++||
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELC-KYKSVENIDICEIDETVIEVSKIYFKNISC--GYEDKRVNVFIEDASKFLENVTNTYD 153 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHT-TCTTCCEEEEEESCHHHHHHHHHHCTTTSG--GGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCeEEEEeCCcCHHHHHHH-HcCCCCEEEEEECCHHHHHHHHHHhHHhcc--ccCCCcEEEEECChHHHHHhCCCCce
Confidence 356799999999999999885 55 36899999999999999998753200 001468999999987642 1246899
Q ss_pred eeEechhhhhcChhhH--HHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDDF--VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~--~~~l~~~~r~LkpgG~liv~ 268 (272)
+|++....++.+...+ .+++++++++|+|||.+++.
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9998654333223333 58999999999999999865
No 195
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.36 E-value=1.1e-12 Score=112.79 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=80.6
Q ss_pred CCCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CC-C-
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PE-T- 228 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~-~- 228 (272)
.++.+|||+|||+|..+..++ +. ..+|+++|+|+.+++.|++++... ....+++++++|+.+.. .. .
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la-~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----g~~~~i~~~~~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALA-LALPADGRVVTCEVDAQPPELGRPLWRQA-----EAEHKIDLRLKPALETLDELLAAG 141 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHH-TTSCTTCEEEEEESCSHHHHHHHHHHHHT-----TCTTTEEEEESCHHHHHHHHHHTT
T ss_pred cCCCEEEEEcCCccHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHHHHHC-----CCCCeEEEEEcCHHHHHHHHHhcC
Confidence 356699999999999999885 54 458999999999999999987542 12357999999885541 11 1
Q ss_pred --CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 229 --GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 229 --~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++||+|++... ......+++++.+.|+|||.+++.+
T Consensus 142 ~~~~~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 142 EAGTFDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp CTTCEEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 58999998654 2345589999999999999998754
No 196
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.35 E-value=1.3e-12 Score=120.59 Aligned_cols=110 Identities=17% Similarity=0.208 Sum_probs=81.3
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCcc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~f 231 (272)
..+.+|||||||+|.++..++ +. ..+|++||+|+.|++.|++++..... .-...+++++++|+.++. ..+++|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la-~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~--gl~~~rv~~~~~D~~~~l~~~~~~~f 195 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVA-RHASIEQIDMCEIDKMVVDVSKQFFPDVAI--GYEDPRVNLVIGDGVAFLKNAAEGSY 195 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHT-TCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGSTTEEEEESCHHHHHHTSCTTCE
T ss_pred CCCCEEEEECCCccHHHHHHH-HcCCCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEECCHHHHHHhccCCCc
Confidence 356799999999999999884 65 35899999999999999998742100 001357999999987642 234689
Q ss_pred eeeEechh--hhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWC--IGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~v--l~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|++... +++..+.....++++++++|+|||.+++.
T Consensus 196 DlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 196 DAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99998654 22211111358999999999999999875
No 197
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.35 E-value=1.2e-12 Score=116.76 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=79.4
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
.+.+|||||||+|.++..++.. ..+|+++|+++.|++.|++++..... ....++++++.+|..++. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~--~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHE--VKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHH--HHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 4579999999999999988644 57899999999999999987642100 002357999999988775 68999998
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
. .+++. .+++++++.|+|||.+++.
T Consensus 146 d-----~~dp~--~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 146 L-----QEPDI--HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp S-----SCCCH--HHHHHHHTTEEEEEEEEEE
T ss_pred C-----CCChH--HHHHHHHHhcCCCcEEEEE
Confidence 6 34565 6999999999999999874
No 198
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.35 E-value=1.8e-12 Score=109.11 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=72.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-------
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------- 225 (272)
.+..+|||+|||+|.++..++... ..+|+++|+|+.. ...++.+.++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------------~~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------------PIPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------------CCTTCEEEECCTTTTSSCCC---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------------CCCCceEEEccccchhhhhhccc
Confidence 456799999999999999885333 2589999999821 1246889999998765
Q ss_pred ------------------CCCCcceeeEechhhhhcC----hhh-----HHHHHHHHHHhcccCcEEEEe
Q 024100 226 ------------------PETGRYDVIWVQWCIGHLT----DDD-----FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 ------------------~~~~~fDlIvs~~vl~hl~----d~~-----~~~~l~~~~r~LkpgG~liv~ 268 (272)
+++++||+|++..++++.. +.. ...+++++.++|+|||.+++.
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 3446899999988776532 211 124899999999999998864
No 199
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.35 E-value=2.4e-12 Score=114.48 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=82.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
+.++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++... ....+++++++|+.+. +++++||
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~-~~~~~~D 183 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW-----GLIERVTIKVRDISEG-FDEKDVD 183 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT-----TCGGGEEEECCCGGGC-CSCCSEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-----CCCCCEEEEECCHHHc-ccCCccC
Confidence 4567799999999999999885442 468999999999999999987532 1125799999998876 3446899
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+|+++ .+++. .+++++.+.|+|||.+++...
T Consensus 184 ~V~~~-----~~~~~--~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 184 ALFLD-----VPDPW--NYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp EEEEC-----CSCGG--GTHHHHHHHEEEEEEEEEEES
T ss_pred EEEEC-----CcCHH--HHHHHHHHHcCCCCEEEEEeC
Confidence 99983 44555 899999999999999987653
No 200
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.35 E-value=8.8e-13 Score=120.41 Aligned_cols=110 Identities=13% Similarity=0.198 Sum_probs=81.9
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCccee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fDl 233 (272)
.+.+|||||||+|.++..++ +. ..+|++||+|+.|++.|++++..... ..-..++++++.+|+.++ +..+++||+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVL-KHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-GAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHT-TSTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCeEEEEcCCcCHHHHHHH-hcCCCCEEEEEECCHHHHHHHHHHhHhhcc-ccccCCceEEEEchHHHHHHhcCCCccE
Confidence 45799999999999999885 55 45899999999999999998742100 000146899999998764 223468999
Q ss_pred eEechhhhh---cChhh--HHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGH---LTDDD--FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~h---l~d~~--~~~~l~~~~r~LkpgG~liv~ 268 (272)
|++....++ -+... ..+++++++++|+|||.+++.
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 999866533 11111 258999999999999998865
No 201
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.34 E-value=2.4e-12 Score=120.69 Aligned_cols=102 Identities=18% Similarity=0.236 Sum_probs=81.3
Q ss_pred CCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
++.+|||||||+|.++. ++++.+ .+|++||.|+ |++.|++.+.. ++...+|+++.+++++++++ ++||+||
T Consensus 83 ~~k~VLDvG~GtGiLs~-~Aa~aGA~~V~ave~s~-~~~~a~~~~~~-----n~~~~~i~~i~~~~~~~~lp-e~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSI-FCAQAGARRVYAVEASA-IWQQAREVVRF-----NGLEDRVHVLPGPVETVELP-EQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHH-HHHHTTCSEEEEEECST-THHHHHHHHHH-----TTCTTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCCEEEEeCCCccHHHH-HHHHhCCCEEEEEeChH-HHHHHHHHHHH-----cCCCceEEEEeeeeeeecCC-ccccEEE
Confidence 46699999999999998 546776 4799999996 89999987643 23456799999999999876 5899999
Q ss_pred echhhhhcChh-hHHHHHHHHHHhcccCcEEE
Q 024100 236 VQWCIGHLTDD-DFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 236 s~~vl~hl~d~-~~~~~l~~~~r~LkpgG~li 266 (272)
|.+.-..+..+ .+..++....+.|+|||.+|
T Consensus 155 sE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 155 SEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred eecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 96654444333 45688888999999999886
No 202
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.34 E-value=8.1e-13 Score=118.73 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=79.1
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCC-------CCCceEEEEeCCCCCCCCC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPD-------MHKATNFFCVPLQDFTPET 228 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~-------~~~~v~~~~~d~~~~~~~~ 228 (272)
.+.+|||+|||+|.++..++ +. ..+|++||+++.|++.|++++ ... ..- ..++++++++|..++...+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~-~~~~~~v~~vDid~~~i~~ar~~~-~~~--~~l~~~~~~~~~~~v~~~~~D~~~~l~~~ 150 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVL-QHDVDEVIMVEIDEDVIMVSKDLI-KID--NGLLEAMLNGKHEKAKLTIGDGFEFIKNN 150 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHT-TSCCSEEEEEESCHHHHHHHHHHT-CTT--TTHHHHHHTTCCSSEEEEESCHHHHHHHC
T ss_pred CCCeEEEEcCCcCHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHH-hhc--cccccccccCCCCcEEEEECchHHHhccc
Confidence 45799999999999999885 55 458999999999999999987 320 000 2467999999976542114
Q ss_pred CcceeeEechhhhhcChhhH--HHHHHHHHHhcccCcEEEEe
Q 024100 229 GRYDVIWVQWCIGHLTDDDF--VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl~d~~~--~~~l~~~~r~LkpgG~liv~ 268 (272)
++||+|++....+.-+...+ .++++++++.|+|||.+++.
T Consensus 151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 68999998765321111222 57999999999999998764
No 203
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.34 E-value=5.5e-13 Score=125.71 Aligned_cols=95 Identities=12% Similarity=0.100 Sum_probs=76.1
Q ss_pred CCCeeeEeecc------cchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-
Q 024100 157 QHLVALDCGSG------IGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE- 227 (272)
Q Consensus 157 ~~~~VLDiGcG------tG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~- 227 (272)
++.+||||||| +|..+..++.+. ..+|++||+|+.|. . ...+++|+++|+.++++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~---------~~~rI~fv~GDa~dlpf~~ 280 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V---------DELRIRTIQGDQNDAEFLD 280 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G---------CBTTEEEEECCTTCHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h---------cCCCcEEEEecccccchhh
Confidence 56799999999 777788786554 35899999999982 1 135899999999987655
Q ss_pred -----CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 228 -----TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 228 -----~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+++||+|++..+ ||. .+...+|++++++|||||.+++.|
T Consensus 281 ~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 281 RIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEe
Confidence 579999998754 554 445599999999999999998865
No 204
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.34 E-value=7.6e-12 Score=109.96 Aligned_cols=101 Identities=13% Similarity=0.007 Sum_probs=73.6
Q ss_pred cCCCCCeeeEeecccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC---CC
Q 024100 154 RNNQHLVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PE 227 (272)
Q Consensus 154 ~~~~~~~VLDiGcGtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~---~~ 227 (272)
++.++.+|||+|||+|.++..++ +. ...|+++|.|+.|++...+.... ..++.++++|+.... ..
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la-~~v~~~G~V~avD~s~~~l~~l~~~a~~--------r~nv~~i~~Da~~~~~~~~~ 143 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVS-DIIELNGKAYGVEFSPRVVRELLLVAQR--------RPNIFPLLADARFPQSYKSV 143 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHH-HHHTTTSEEEEEECCHHHHHHHHHHHHH--------CTTEEEEECCTTCGGGTTTT
T ss_pred CCCCCCEEEEEeecCCHHHHHHH-HHhCCCCEEEEEECcHHHHHHHHHHhhh--------cCCeEEEEcccccchhhhcc
Confidence 36778899999999999999774 54 23899999999987554433211 247999999987542 12
Q ss_pred CCcceeeEechhhhhcChhhHHH-HHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVS-FFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~-~l~~~~r~LkpgG~liv~ 268 (272)
.++||+|++..+. ++... ++..+.+.|+|||.++++
T Consensus 144 ~~~~D~I~~d~a~-----~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 144 VENVDVLYVDIAQ-----PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CCCEEEEEECCCC-----TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEEEecCCC-----hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 3589999998653 22224 455666799999999875
No 205
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.34 E-value=2.4e-12 Score=118.83 Aligned_cols=107 Identities=17% Similarity=0.071 Sum_probs=84.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC---CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~---~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
..++.+|||+|||+|.++..++ ..+ ..++++|+|+.|++.|++++... ...+++|.++|+.+++++.+.|
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a-~~~~~~~~v~g~Di~~~~i~~a~~n~~~~------g~~~i~~~~~D~~~~~~~~~~~ 273 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAA-STLGPTSPVYAGDLDEKRLGLAREAALAS------GLSWIRFLRADARHLPRFFPEV 273 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHH-HHHCTTSCEEEEESCHHHHHHHHHHHHHT------TCTTCEEEECCGGGGGGTCCCC
T ss_pred CCCCCEEEeCCCCcCHHHHHHH-HhhCCCceEEEEECCHHHHHHHHHHHHHc------CCCceEEEeCChhhCccccCCC
Confidence 4567799999999999999884 544 79999999999999999998643 2237999999999987666679
Q ss_pred eeeEechhhhhcCh------hhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTD------DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d------~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|+++-.++.-.. .....+++++.+.|+|||.+++.
T Consensus 274 D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 274 DRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp SEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred CEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999754432111 11358999999999999988764
No 206
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.33 E-value=3.1e-12 Score=116.73 Aligned_cols=108 Identities=15% Similarity=0.106 Sum_probs=81.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
..++.+|||+|||+|..+..++... ...|+++|+|+.|++.+++++... ...++.++++|+.+++..+++||
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~------g~~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL------GVLNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH------TCCSEEEESSCGGGGGGGCCCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh------CCCeEEEEECChhhcccccccCC
Confidence 3567799999999999999885332 258999999999999999988543 23478999999988764456899
Q ss_pred eeEec------hhhhhcCh-------hh-------HHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQ------WCIGHLTD-------DD-------FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~------~vl~hl~d-------~~-------~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|++. .++++.++ .+ ...+|+++.+.|+|||.++.+
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~s 245 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS 245 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 99974 22333221 11 148999999999999998864
No 207
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.33 E-value=1.4e-12 Score=116.89 Aligned_cols=109 Identities=14% Similarity=0.150 Sum_probs=81.2
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCccee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fDl 233 (272)
.+.+|||+|||+|.++..++ +. ..+|++||+++.|++.|++++..... ....++++++.+|..++ ...+++||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vEid~~~v~~ar~~~~~~~~--~~~~~rv~v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREIL-KHPSVKKATLVDIDGKVIEYSKKFLPSIAG--KLDDPRVDVQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHT-TCTTCSEEEEEESCHHHHHHHHHHCHHHHT--TTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCCEEEEECCchHHHHHHHH-hCCCCceEEEEECCHHHHHHHHHHhHhhcc--ccCCCceEEEECcHHHHHhhCCCCeeE
Confidence 46799999999999999885 55 35999999999999999998743100 01246899999998764 222468999
Q ss_pred eEechhhhhcChhh--HHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLTDDD--FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~d~~--~~~~l~~~~r~LkpgG~liv~ 268 (272)
|++....++.+... ..+++++++++|+|||.+++.
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99965432222111 137999999999999999875
No 208
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.33 E-value=1.3e-12 Score=118.94 Aligned_cols=111 Identities=13% Similarity=0.097 Sum_probs=79.5
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCcce
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD 232 (272)
..+.+|||||||+|.++..++ +.. .+|++||+|+.|++.|++++..... .-..++++++.+|..++ +..+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vDid~~~i~~ar~~~~~~~~--~~~~~rv~v~~~Da~~~l~~~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVV-KHPSVESVVQCEIDEDVIQVSKKFLPGMAI--GYSSSKLTLHVGDGFEFMKQNQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHT-TCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHTCSSCEE
T ss_pred CCCCEEEEECCCchHHHHHHH-HcCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHhhCCCCce
Confidence 356799999999999999885 554 6899999999999999998742100 00146799999998664 22346899
Q ss_pred eeEechhhhhcChhh--HHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLTDDD--FVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~d~~--~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|++....+.-+... ..+++++++++|+|||.+++..
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999865542211111 2379999999999999988653
No 209
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.33 E-value=4.4e-13 Score=117.51 Aligned_cols=98 Identities=16% Similarity=0.048 Sum_probs=65.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE-eCCCCCCCCCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~fDlI 234 (272)
++.+|||+|||||.++..++ +.+ .+|+++|+|+.|++.|+++...... ....++.+.. .++....+...+||++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la-~~g~~~V~gvDis~~ml~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~D~v 112 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVML-QNGAKLVYALDVGTNQLAWKIRSDERVVV---MEQFNFRNAVLADFEQGRPSFTSIDVS 112 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHH-HTTCSEEEEECSSCCCCCHHHHTCTTEEE---ECSCCGGGCCGGGCCSCCCSEEEECCS
T ss_pred CCCEEEEEccCCCHHHHHHH-hcCCCEEEEEcCCHHHHHHHHHhCccccc---cccceEEEeCHhHcCcCCCCEEEEEEE
Confidence 45699999999999999885 555 5999999999999998875432100 0011233333 3332211222356666
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+++. ..+|++++++|+|||.+++.
T Consensus 113 ~~~l----------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 113 FISL----------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SSCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred hhhH----------HHHHHHHHHhccCCCEEEEE
Confidence 5542 37999999999999988764
No 210
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.32 E-value=5.2e-13 Score=117.01 Aligned_cols=106 Identities=13% Similarity=0.021 Sum_probs=71.8
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC---CCC---CC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE---TG 229 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~---~~~---~~ 229 (272)
++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|++++... ....+++++++|+.+. +++ ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-----NLSDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc-----CCCccEEEEEcchhhhhhhhhhcccCC
Confidence 46699999999999999885433 469999999999999999987542 1223599999997652 222 25
Q ss_pred cceeeEechhhhhcC-h------------hhHHHHHHHHHHhcccCcEEEE
Q 024100 230 RYDVIWVQWCIGHLT-D------------DDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~-d------------~~~~~~l~~~~r~LkpgG~liv 267 (272)
+||+|+++-.+++.. + .....++.+++++|+|||.+.+
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 899999986554432 0 0112466777888888886543
No 211
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.32 E-value=9.1e-13 Score=119.51 Aligned_cols=96 Identities=10% Similarity=0.027 Sum_probs=69.2
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceE-EEEeCCCCCC---CCCCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATN-FFCVPLQDFT---PETGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~-~~~~d~~~~~---~~~~~fD 232 (272)
++.+|||+|||||.+|..++.....+|++||+|+.|++.+.++- .++. +...++..++ ++..+||
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~-----------~rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD-----------DRVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC-----------TTEEEECSCCGGGCCGGGCTTCCCS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------cccceecccCceecchhhCCCCCCC
Confidence 45699999999999999775333459999999999999865432 1111 1122322222 1223599
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|++..+++++ ..+|.++.++|+|||.+++.
T Consensus 154 ~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFISL-----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE
Confidence 99999888764 37999999999999998765
No 212
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.31 E-value=4.4e-12 Score=116.04 Aligned_cols=107 Identities=13% Similarity=0.100 Sum_probs=78.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc-C--CcEEEEeCCHHHHHHHHHhccccC----CC-CCCCCCceEEEEeCCCCC--
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY-F--NEVDLLEPVSHFLDAARESLAPEN----HM-APDMHKATNFFCVPLQDF-- 224 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~-~--~~v~~vD~S~~mld~A~~~l~~~~----~~-~~~~~~~v~~~~~d~~~~-- 224 (272)
+.++.+|||+|||+|.++..++ +. + .+|+++|+++.+++.|++++.... .. ......+++++++|+.+.
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la-~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLS-KAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCEEEEeCCCcCHHHHHHH-HHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 4567799999999999999885 54 3 689999999999999999875310 00 000125799999999876
Q ss_pred CCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 225 ~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
++++++||+|+++.. ++. .++.++.+.|+|||.+++..
T Consensus 182 ~~~~~~fD~V~~~~~-----~~~--~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 182 DIKSLTFDAVALDML-----NPH--VTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp ------EEEEEECSS-----STT--TTHHHHGGGEEEEEEEEEEE
T ss_pred ccCCCCeeEEEECCC-----CHH--HHHHHHHHhcCCCcEEEEEe
Confidence 334468999998543 344 58999999999999998654
No 213
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.31 E-value=2.6e-12 Score=117.78 Aligned_cols=108 Identities=19% Similarity=0.291 Sum_probs=80.5
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CCCCccee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fDl 233 (272)
.+.+|||+|||+|.++..++ +. ..+|+++|+|+.|++.|++++..... .-..++++++++|+.++. ..+++||+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vDis~~~l~~ar~~~~~~~~--~~~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELC-KYKSVENIDICEIDETVIEVSKIYFKNISC--GYEDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHT-TCTTCCEEEEEESCHHHHHHHHHHCTTTSG--GGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCEEEEEcCCccHHHHHHH-HcCCCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEEccHHHHHhhcCCCceE
Confidence 45799999999999999885 55 46899999999999999998753100 001457999999986642 12468999
Q ss_pred eEechhhhhcC-hhhH--HHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLT-DDDF--VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~-d~~~--~~~l~~~~r~LkpgG~liv~ 268 (272)
|++...- ++. ...+ .++++++++.|+|||.+++.
T Consensus 193 Ii~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 193 IIVDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EEEECCC-SSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCcC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9986531 221 1222 58999999999999998874
No 214
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.31 E-value=1.8e-12 Score=118.62 Aligned_cols=108 Identities=19% Similarity=0.283 Sum_probs=78.0
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCccee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fDl 233 (272)
.+.+|||||||+|.++..++ +. ..+|+++|+|+.|++.|++++..... .-..++++++.+|+.++ +..+++||+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~-~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~--~~~~~rv~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVL-KHESVEKVTMCEIDEMVIDVAKKFLPGMSC--GFSHPKLDLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHT-TCTTCCEEEEECSCHHHHHHHHHHCTTTSG--GGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHH-HcCCCCEEEEEECCHHHHHHHHHHHHHhcc--ccCCCCEEEEEChHHHHHHhcCCCceE
Confidence 45799999999999999885 55 46899999999999999998853200 00146799999998664 223468999
Q ss_pred eEechhhhhcC-hhhH--HHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLT-DDDF--VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~-d~~~--~~~l~~~~r~LkpgG~liv~ 268 (272)
|++...- ++. ...+ .+++++++++|+|||.+++.
T Consensus 185 Ii~d~~~-~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 185 IITDSSD-PVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp EEECCC--------------HHHHHHHHEEEEEEEEEE
T ss_pred EEEcCCC-CCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 9986543 332 2222 58999999999999999875
No 215
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.31 E-value=7.4e-12 Score=112.71 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=77.6
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc---e
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY---D 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f---D 232 (272)
++.+|||+|||+|.++..++ +. ..+|+++|+|+.+++.|++++... ....+++|+++|+.+.. + ++| |
T Consensus 123 ~~~~vLDlG~GsG~~~~~la-~~~~~~v~~vDis~~al~~A~~n~~~~-----~l~~~v~~~~~D~~~~~-~-~~f~~~D 194 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVA-KFSDAIVFATDVSSKAVEIARKNAERH-----GVSDRFFVRKGEFLEPF-K-EKFASIE 194 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHH-HHSSCEEEEEESCHHHHHHHHHHHHHT-----TCTTSEEEEESSTTGGG-G-GGTTTCC
T ss_pred CCCEEEEEeCchhHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCceEEEECcchhhc-c-cccCCCC
Confidence 44689999999999999885 55 568999999999999999987542 12235999999998742 2 479 9
Q ss_pred eeEech------------hhhhcChh------hHHHHHHHHH-HhcccCcEEEE
Q 024100 233 VIWVQW------------CIGHLTDD------DFVSFFKRAK-ENIARSGTFLL 267 (272)
Q Consensus 233 lIvs~~------------vl~hl~d~------~~~~~l~~~~-r~LkpgG~liv 267 (272)
+|+++- +. |-+.. +-..+++++. +.|+|||.+++
T Consensus 195 ~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 195 MILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp EEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred EEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 999972 22 22111 1127899999 99999999876
No 216
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.31 E-value=2.9e-12 Score=118.10 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=79.8
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCC-ceEEEEeCCCCCCCC----CCcc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTPE----TGRY 231 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~-~v~~~~~d~~~~~~~----~~~f 231 (272)
++.+|||+|||+|.++..++ +.+.+|++||.|+.|++.|++++.... ... +++++++|+.++... .++|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la-~~ga~V~~VD~s~~al~~a~~n~~~~g-----l~~~~v~~i~~D~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAA-AAGAEVTHVDASKKAIGWAKENQVLAG-----LEQAPIRWICEDAMKFIQREERRGSTY 226 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHT-----CTTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred CCCcEEEcccccCHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHHcC-----CCccceEEEECcHHHHHHHHHhcCCCc
Confidence 45699999999999999884 666699999999999999999875321 112 489999998775421 3589
Q ss_pred eeeEechh----------hhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWC----------IGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~v----------l~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|+++-. +++ ..+...+++++.++|+|||.+++.
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~--~~~~~~ll~~~~~~LkpgG~lli~ 271 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQL--FDHLPLMLDICREILSPKALGLVL 271 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEH--HHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred eEEEECCccccCCchHHHHHH--HHHHHHHHHHHHHhcCcCcEEEEE
Confidence 99998532 112 234568999999999999987654
No 217
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.30 E-value=1.5e-11 Score=103.99 Aligned_cols=99 Identities=20% Similarity=0.191 Sum_probs=79.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|||+|||+|.++..++ +.+ ..|+++|+|+.|++.|++++... ..+++++++|+.+++ ++||+|
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~-~~~~~~v~~vD~~~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~---~~~D~v 116 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGAL-LLGAKEVICVEVDKEAVDVLIENLGEF-------KGKFKVFIGDVSEFN---SRVDIV 116 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHTGGG-------TTSEEEEESCGGGCC---CCCSEE
T ss_pred CCcCEEEEeeCCCCHHHHHHH-HcCCCEEEEEECCHHHHHHHHHHHHHc-------CCCEEEEECchHHcC---CCCCEE
Confidence 356799999999999999874 554 47999999999999999987532 127899999998873 489999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+++..+++........+++++.+.+ ||.++.
T Consensus 117 ~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 117 IMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp EECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred EEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 9999887765444457899999888 665543
No 218
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.29 E-value=4.2e-12 Score=114.97 Aligned_cols=109 Identities=16% Similarity=0.161 Sum_probs=78.3
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCccee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fDl 233 (272)
.+.+|||+|||+|.++..++ +. ..+|++||+|+.+++.|++++..... .-..++++++++|+.++ +..+++||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~-~~~~~~~v~~vDid~~~~~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVL-KHDSVEKAILCEVDGLVIEAARKYLKQTSC--GFDDPRAEIVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHT-TSTTCSEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHH-hcCCCCEEEEEECCHHHHHHHHHHhHhhcc--ccCCCceEEEECcHHHHHhhCCCCceE
Confidence 45799999999999999885 55 46899999999999999998742100 00136899999997654 223468999
Q ss_pred eEechhhhhcCh-h--hHHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLTD-D--DFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~d-~--~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|++...-+.+.. . ...++++++++.|+|||.+++.
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 998643211211 1 1248999999999999998875
No 219
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.28 E-value=4.1e-12 Score=115.81 Aligned_cols=102 Identities=8% Similarity=0.016 Sum_probs=72.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeC----CHHHHHHHHHhccccCCCCCCCCCceEEEEe-CCCCCCCCCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP----VSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETG 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~----S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~-d~~~~~~~~~ 229 (272)
+.++.+|||+|||+|.++..+ ++. ..|++||. ++.+++.++ . .....+++.|+++ |+..++ ++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~l-a~~-~~V~gvD~~~~~~~~~~~~~~--~------~~~~~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYC-GGL-KNVREVKGLTKGGPGHEEPIP--M------STYGWNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHH-HTS-TTEEEEEEECCCSTTSCCCCC--C------CSTTGGGEEEECSCCTTTSC--CC
T ss_pred CCCCCEEEEEcCCCCHHHHHH-Hhc-CCEEEEeccccCchhHHHHHH--h------hhcCCCCeEEEeccccccCC--cC
Confidence 356679999999999999977 466 68999998 565542111 1 0112357899998 887764 35
Q ss_pred cceeeEechhhh---hcChhh-HHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIG---HLTDDD-FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~---hl~d~~-~~~~l~~~~r~LkpgG~liv~ 268 (272)
+||+|+|.++++ +..+.. ...+|..+.++|+|||.|++.
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 899999987652 222222 225899999999999988764
No 220
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.27 E-value=1.1e-11 Score=111.65 Aligned_cols=103 Identities=11% Similarity=0.100 Sum_probs=76.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.+++++... ....+++++++|+.+++++ +||+|
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~-~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~v~~~~~D~~~~~~~--~fD~v 97 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLL-EKAKKVVACELDPRLVAELHKRVQGT-----PVASKLQVLVGDVLKTDLP--FFDTC 97 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHH-HHSSEEEEEESCHHHHHHHHHHHTTS-----TTGGGEEEEESCTTTSCCC--CCSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHH-hhCCEEEEEECCHHHHHHHHHHHHhc-----CCCCceEEEEcceecccch--hhcEE
Confidence 4567799999999999999884 66789999999999999999987431 1125899999999887654 79999
Q ss_pred EechhhhhcChhhHHHHH--------------HHH--HHhcccCcEEE
Q 024100 235 WVQWCIGHLTDDDFVSFF--------------KRA--KENIARSGTFL 266 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l--------------~~~--~r~LkpgG~li 266 (272)
+++..+ |++.+.+..++ +++ +++|+|||.++
T Consensus 98 v~nlpy-~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 98 VANLPY-QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEecCc-ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 997554 33333333333 233 36899999653
No 221
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.26 E-value=1.4e-11 Score=114.84 Aligned_cols=97 Identities=8% Similarity=0.030 Sum_probs=78.3
Q ss_pred CCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC-CCC-CCCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTP-ETGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~~fD 232 (272)
++.+|||+| |+|.++..+ +..+ .+|+++|+|+.|++.|++++... ...+++++++|+.+ ++. .+++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~l-a~~~~~~~v~~vDi~~~~l~~a~~~~~~~------g~~~v~~~~~D~~~~l~~~~~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIAL-MLSGLPKRIAVLDIDERLTKFIEKAANEI------GYEDIEIFTFDLRKPLPDYALHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHH-HHHTCCSEEEEECSCHHHHHHHHHHHHHH------TCCCEEEECCCTTSCCCTTTSSCBS
T ss_pred CCCEEEEEC-CCCHHHHHH-HHhCCCCEEEEEECCHHHHHHHHHHHHHc------CCCCEEEEEChhhhhchhhccCCcc
Confidence 467999999 999999987 4654 48999999999999999997542 12279999999988 543 235899
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcE
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGT 264 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~ 264 (272)
+|+++..+++. ....+++++.+.|+|||.
T Consensus 244 ~Vi~~~p~~~~---~~~~~l~~~~~~LkpgG~ 272 (373)
T 2qm3_A 244 TFITDPPETLE---AIRAFVGRGIATLKGPRC 272 (373)
T ss_dssp EEEECCCSSHH---HHHHHHHHHHHTBCSTTC
T ss_pred EEEECCCCchH---HHHHHHHHHHHHcccCCe
Confidence 99998766443 246899999999999993
No 222
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.26 E-value=1.4e-11 Score=108.86 Aligned_cols=103 Identities=10% Similarity=-0.071 Sum_probs=86.8
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|-++..+. ....+.++|+|+.|++.+++++.. ...+.++..+|+..-+++ ++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~-------~g~~~~~~v~D~~~~~~~-~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFARE-------KDWDFTFALQDVLCAPPA-EAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHH-------TTCEEEEEECCTTTSCCC-CBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHh-------cCCCceEEEeecccCCCC-CCcchHH
Confidence 457799999999999999763 556999999999999999999753 246789999999877765 5999999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+.-++||+.+.+....+ ++.+.|+++|.+|-.+
T Consensus 174 llk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 174 IFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp EESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 99999999776555666 8888999999998765
No 223
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.26 E-value=8.4e-12 Score=111.42 Aligned_cols=108 Identities=11% Similarity=0.059 Sum_probs=80.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc-C-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ET 228 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~-~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~ 228 (272)
..++.+|||+|||+|..+..++... . ..|+++|+|+.+++.+++++... ...+++++++|+.+++. ..
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~------g~~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM------GVLNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEESCHHHHHHHHHHTT
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh------CCCcEEEEeCChHhcchhhhhcc
Confidence 3466799999999999999885332 2 68999999999999999987543 23479999999877653 24
Q ss_pred CcceeeEec------hhhh--------hcCh--hhHHHHHHHHHHhcccCcEEEEe
Q 024100 229 GRYDVIWVQ------WCIG--------HLTD--DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~------~vl~--------hl~d--~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++||+|++. .+++ ++.. .....+++++.+.|+|||.++.+
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~s 210 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYS 210 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 689999976 2221 1110 22358999999999999998764
No 224
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.25 E-value=5.4e-12 Score=105.54 Aligned_cols=98 Identities=20% Similarity=0.216 Sum_probs=70.0
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC----------CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE-EeCCCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF----------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-CVPLQD 223 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~----------~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~-~~d~~~ 223 (272)
+.++.+|||+|||+|.++..++.... .+|+++|+|+.+ ...++.++ .+|+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------------~~~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------------PLEGATFLCPADVTD 82 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------------CCTTCEEECSCCTTS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------------cCCCCeEEEeccCCC
Confidence 34677999999999999998853333 579999999831 12357888 888765
Q ss_pred CC--------CCCCcceeeEechhh----hhcChhh-----HHHHHHHHHHhcccCcEEEEec
Q 024100 224 FT--------PETGRYDVIWVQWCI----GHLTDDD-----FVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 224 ~~--------~~~~~fDlIvs~~vl----~hl~d~~-----~~~~l~~~~r~LkpgG~liv~E 269 (272)
.+ +++++||+|++..++ +|..+.. ...+++++.++|+|||.+++..
T Consensus 83 ~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 83 PRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 43 223589999986543 3322321 1478999999999999998763
No 225
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.24 E-value=1.6e-11 Score=107.73 Aligned_cols=103 Identities=14% Similarity=0.041 Sum_probs=80.8
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
+++.+|||||||+|.++..+ ++.++ +|+++|+++.+++.|++++... +...++++.++|..+...+.++||+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~l-a~~~~~~~V~AvDi~~~al~~A~~N~~~~-----gl~~~I~~~~gD~l~~~~~~~~~D~ 93 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFL-LQMGYCDFAIAGEVVNGPYQSALKNVSEH-----GLTSKIDVRLANGLSAFEEADNIDT 93 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHH-HHTTCEEEEEEEESSHHHHHHHHHHHHHT-----TCTTTEEEEECSGGGGCCGGGCCCE
T ss_pred CCCCEEEEECCchHHHHHHH-HHhCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEECchhhccccccccCE
Confidence 45679999999999999977 56654 7999999999999999998643 2235799999998765443337999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|++..... +-...++....+.|+++|.+|++
T Consensus 94 IviaGmGg----~lI~~IL~~~~~~l~~~~~lIlq 124 (230)
T 3lec_A 94 ITICGMGG----RLIADILNNDIDKLQHVKTLVLQ 124 (230)
T ss_dssp EEEEEECH----HHHHHHHHHTGGGGTTCCEEEEE
T ss_pred EEEeCCch----HHHHHHHHHHHHHhCcCCEEEEE
Confidence 98766542 23557888888899999988875
No 226
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.23 E-value=5.5e-11 Score=113.56 Aligned_cols=108 Identities=10% Similarity=0.046 Sum_probs=82.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGR 230 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~ 230 (272)
..++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++... ...++.++++|+.+++ +++++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~------g~~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM------GIKIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT------TCCSEEEECSCTTCCSSSSCSSC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc------CCCcEEEEEcChhhcchhhccCC
Confidence 35667999999999999998854322 58999999999999999987543 2347999999998875 33368
Q ss_pred ceeeEe------chhhhhcChh-------hH-------HHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWV------QWCIGHLTDD-------DF-------VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs------~~vl~hl~d~-------~~-------~~~l~~~~r~LkpgG~liv~ 268 (272)
||+|++ ..++++.++. ++ ..+|+++.+.|+|||.++.+
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~ 388 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYT 388 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999995 3345443332 11 47899999999999998864
No 227
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.23 E-value=2e-11 Score=107.97 Aligned_cols=103 Identities=11% Similarity=0.032 Sum_probs=80.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
+++.+|||||||+|.++..+ ++.++ .|+++|+++.+++.|++++... +...++++.++|..+...+..+||+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~l-a~~~~~~~V~avDi~~~al~~A~~N~~~~-----gl~~~I~v~~gD~l~~~~~~~~~D~ 93 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFA-VKNQTASFAIAGEVVDGPFQSAQKQVRSS-----GLTEQIDVRKGNGLAVIEKKDAIDT 93 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHH-HHTTSEEEEEEEESSHHHHHHHHHHHHHT-----TCTTTEEEEECSGGGGCCGGGCCCE
T ss_pred CCCCEEEEECCccHHHHHHH-HHhCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCceEEEEecchhhccCccccccE
Confidence 45679999999999999977 56654 7999999999999999998542 2234699999998765433235999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|++..... .-...++.+..+.|+++|.+|++
T Consensus 94 IviagmGg----~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 94 IVIAGMGG----TLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp EEEEEECH----HHHHHHHHHTGGGGTTCCEEEEE
T ss_pred EEEeCCch----HHHHHHHHHHHHHhCCCCEEEEE
Confidence 99765432 23557888889999999988875
No 228
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.23 E-value=2.2e-11 Score=106.61 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=79.6
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCC-CCCCCCCcce
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ-DFTPETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD 232 (272)
+++.+|||||||+|.++..+ ++.++ +|+++|+++.+++.|++++... +...++++.++|.. .+++. .+||
T Consensus 14 ~~g~~VlDIGtGsG~l~i~l-a~~~~~~~V~avDi~~~al~~A~~N~~~~-----gl~~~i~~~~~d~l~~l~~~-~~~D 86 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIEL-VERGQIKSAIAGEVVEGPYQSAVKNVEAH-----GLKEKIQVRLANGLAAFEET-DQVS 86 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHH-HHTTSEEEEEEEESSHHHHHHHHHHHHHT-----TCTTTEEEEECSGGGGCCGG-GCCC
T ss_pred CCCCEEEEeCCCcHHHHHHH-HHhCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCceEEEEECchhhhcccC-cCCC
Confidence 45679999999999999977 56654 7999999999999999998643 22347999999985 44432 2699
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|++...-. .-...++..+.+.|+|+|.+|++
T Consensus 87 ~IviaG~Gg----~~i~~Il~~~~~~L~~~~~lVlq 118 (225)
T 3kr9_A 87 VITIAGMGG----RLIARILEEGLGKLANVERLILQ 118 (225)
T ss_dssp EEEEEEECH----HHHHHHHHHTGGGCTTCCEEEEE
T ss_pred EEEEcCCCh----HHHHHHHHHHHHHhCCCCEEEEE
Confidence 999765532 22558999999999999998875
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.22 E-value=1.9e-11 Score=109.08 Aligned_cols=104 Identities=9% Similarity=-0.021 Sum_probs=86.4
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
..+.+|||+|||+|-++..++ .. ..++.++|+++.|++.+++++... ....++...|+..-+++ ++||+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~-~~~p~a~y~a~DId~~~le~a~~~l~~~-------g~~~~~~v~D~~~~~p~-~~~Dv 201 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWM-GLPAETVYIASDIDARLVGFVDEALTRL-------NVPHRTNVADLLEDRLD-EPADV 201 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTT-TCCTTCEEEEEESBHHHHHHHHHHHHHT-------TCCEEEEECCTTTSCCC-SCCSE
T ss_pred CCCceeeeeccCccHHHHHHH-hhCCCCEEEEEeCCHHHHHHHHHHHHhc-------CCCceEEEeeecccCCC-CCcch
Confidence 457799999999999999774 44 348999999999999999998542 34578899998766544 68999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|++.-++||+.+......| ++.+.|+|+|.+|..+
T Consensus 202 aL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 202 TLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp EEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 9999999999887666777 8999999999998654
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.21 E-value=2.9e-11 Score=112.76 Aligned_cols=106 Identities=15% Similarity=0.103 Sum_probs=80.7
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.++.+|||+|||+|.++..+ +..+. +|+++|+|+.|++.|++++... +...+++|.++|+.++++++++||+
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~-a~~~~~~~v~g~Dis~~~l~~A~~n~~~~-----gl~~~i~~~~~D~~~~~~~~~~fD~ 289 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIEL-ALRRYSGEIIGIEKYRKHLIGAEMNALAA-----GVLDKIKFIQGDATQLSQYVDSVDF 289 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHH-HHTTCCSCEEEEESCHHHHHHHHHHHHHT-----TCGGGCEEEECCGGGGGGTCSCEEE
T ss_pred CCCCEEEEccCcCcHHHHHH-HHhCCCCeEEEEeCCHHHHHHHHHHHHHc-----CCCCceEEEECChhhCCcccCCcCE
Confidence 35679999999999999988 57666 9999999999999999998543 1235899999999998766679999
Q ss_pred eEechhhhhcC-----hhh-HHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLT-----DDD-FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~-----d~~-~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+++-.++.-. -.+ ...++++++++| +|+.+++.
T Consensus 290 Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~ 329 (373)
T 3tm4_A 290 AISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT 329 (373)
T ss_dssp EEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred EEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 99976543321 112 357889999999 44444443
No 231
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.19 E-value=5.2e-11 Score=101.00 Aligned_cols=96 Identities=14% Similarity=0.033 Sum_probs=70.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
+.++.+|||+|||+|.++..+ ++....|++||+++.. ...+++++++|+.+.+..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~l-a~~~~~V~gvD~~~~~-----------------~~~~v~~~~~D~~~~~~~~~~~~~~ 84 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVL-NSLARKIISIDLQEME-----------------EIAGVRFIRCDIFKETIFDDIDRAL 84 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHH-TTTCSEEEEEESSCCC-----------------CCTTCEEEECCTTSSSHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHH-HHcCCcEEEEeccccc-----------------cCCCeEEEEccccCHHHHHHHHHHh
Confidence 346789999999999999977 5668899999998631 124789999999876421
Q ss_pred ----CCcceeeEechh--------hhhcCh-hhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 ----TGRYDVIWVQWC--------IGHLTD-DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ----~~~fDlIvs~~v--------l~hl~d-~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.++||+|++... ..|... .....+++.+.++|+|||.+++.
T Consensus 85 ~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 85 REEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp HHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 038999998542 222111 12347899999999999999864
No 232
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.18 E-value=1.7e-11 Score=114.95 Aligned_cols=107 Identities=9% Similarity=0.082 Sum_probs=80.0
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCC-ceEEEEeCCCCCCC----CCCc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTP----ETGR 230 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~-~v~~~~~d~~~~~~----~~~~ 230 (272)
++.+|||+|||+|.++..++ +. ..+|++||.|+.|++.|++++... .... +++|+++|+.++.. ..++
T Consensus 212 ~~~~VLDl~cGtG~~sl~la-~~ga~~V~~vD~s~~al~~A~~N~~~n-----~~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAA-MGGAMATTSVDLAKRSRALSLAHFEAN-----HLDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHH-HTTBSEEEEEESCTTHHHHHHHHHHHT-----TCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCeEEEEeeccCHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCccceEEEECCHHHHHHHHHHhCCC
Confidence 45699999999999999885 54 458999999999999999987532 1122 79999999876421 1348
Q ss_pred ceeeEechhh-----hhcCh--hhHHHHHHHHHHhcccCcEEEEec
Q 024100 231 YDVIWVQWCI-----GHLTD--DDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 231 fDlIvs~~vl-----~hl~d--~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
||+|++.-.. .++.+ ..+.++++.+.+.|+|||.+++..
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999985332 22222 335568889999999999998764
No 233
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.18 E-value=1.1e-11 Score=115.87 Aligned_cols=106 Identities=17% Similarity=0.072 Sum_probs=81.1
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC----CCcce
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~fD 232 (272)
++.+|||+|||+|.++..++ +...+|+++|+|+.+++.|++++... ...+++|+++|+.++.+. .++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la-~~~~~v~~vD~s~~~~~~a~~n~~~n------~~~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLA-LGFREVVAVDSSAEALRRAEENARLN------GLGNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHH-HHEEEEEEEESCHHHHHHHHHHHHHT------TCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHH-HhCCEEEEEECCHHHHHHHHHHHHHc------CCCCceEEECCHHHHHHHHHhcCCCee
Confidence 45699999999999999885 55779999999999999999987532 223589999998776321 45899
Q ss_pred eeEechhhhhcC-------hhhHHHHHHHHHHhcccCcEEEEec
Q 024100 233 VIWVQWCIGHLT-------DDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 233 lIvs~~vl~hl~-------d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
+|++.-.....+ ......++.++.+.|+|||.+++..
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999853211111 1334589999999999999988764
No 234
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.18 E-value=5.2e-11 Score=107.94 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=73.4
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.+++++... ...+++++++|+.++++ .+||+|
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~L-a~~~~~v~~vDi~~~~~~~a~~~~~~~------~~~~v~~~~~D~~~~~~--~~~D~V 110 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKL-LPLAKKVITIDIDSRMISEVKKRCLYE------GYNNLEVYEGDAIKTVF--PKFDVC 110 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHH-TTTSSEEEEECSCHHHHHHHHHHHHHT------TCCCEEC----CCSSCC--CCCSEE
T ss_pred CCCcCEEEEEcCcCcHHHHHH-HhcCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEECchhhCCc--ccCCEE
Confidence 346679999999999999987 577889999999999999999987421 23579999999988765 379999
Q ss_pred EechhhhhcChhhHHHHH---------------HHHHHhcccCc
Q 024100 235 WVQWCIGHLTDDDFVSFF---------------KRAKENIARSG 263 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l---------------~~~~r~LkpgG 263 (272)
+++... |++.+.+..++ ....++++++|
T Consensus 111 v~n~py-~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 111 TANIPY-KISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp EEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred EEcCCc-ccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 997665 45555545555 33567788776
No 235
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.17 E-value=2.4e-11 Score=113.91 Aligned_cols=106 Identities=9% Similarity=0.033 Sum_probs=80.4
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCcc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRY 231 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~f 231 (272)
++.+|||+|||+|.++..++ +. ..+|+++|.|+.+++.|++++... ....+++|+++|+.++.+ ..++|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la-~~g~~~v~~vD~s~~~l~~a~~n~~~n-----~~~~~v~~~~~d~~~~~~~~~~~~~~f 290 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAA-IAGADEVIGIDKSPRAIETAKENAKLN-----GVEDRMKFIVGSAFEEMEKLQKKGEKF 290 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHT-----TCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEecCCCCHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHHHHc-----CCCccceEEECCHHHHHHHHHhhCCCC
Confidence 56799999999999999884 65 459999999999999999987532 112379999999876532 14589
Q ss_pred eeeEechhhhhcC-------hhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLT-------DDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~-------d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|++.-.....+ ......++.++.+.|+|||.++..
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 334 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTC 334 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9999853221111 133558999999999999988765
No 236
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.17 E-value=1.1e-10 Score=112.67 Aligned_cols=106 Identities=12% Similarity=0.075 Sum_probs=81.0
Q ss_pred CCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-CCCccee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDV 233 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fDl 233 (272)
++.+|||+|||+|..|..++... ...|+++|+|+.+++.+++++... ...++.++++|+.+++. .+++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~------g~~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC------GISNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH------TCCSEEEECCCSTTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCCcEEEEeCCHHHhhhhccccCCE
Confidence 67799999999999999885433 258999999999999999998643 23478999999988753 3468999
Q ss_pred eEec------hhhhhcChh-------h-------HHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQ------WCIGHLTDD-------D-------FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~------~vl~hl~d~-------~-------~~~~l~~~~r~LkpgG~liv~ 268 (272)
|++. .++.+-++. + ..++|+++.+.|+|||.++.+
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvys 245 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYS 245 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 9972 233332221 1 246899999999999998764
No 237
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.15 E-value=3.6e-11 Score=112.81 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=81.2
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCC-CCceEEEEeCCCCCCCC----CCc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDM-HKATNFFCVPLQDFTPE----TGR 230 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~-~~~v~~~~~d~~~~~~~----~~~ 230 (272)
++.+|||+|||+|.++..++ +. ..+|+++|.|+.+++.|++++... .. ..+++|+++|+.++... .++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la-~~g~~~V~~vD~s~~al~~a~~n~~~n-----gl~~~~v~~~~~D~~~~~~~~~~~~~~ 293 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSAL-MGGCSQVVSVDTSQEALDIARQNVELN-----KLDLSKAEFVRDDVFKLLRTYRDRGEK 293 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHT-----TCCGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCeEEEeeccCCHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCccceEEEECCHHHHHHHHHhcCCC
Confidence 45699999999999999884 65 569999999999999999987531 11 22799999998776321 358
Q ss_pred ceeeEechhhhh-----cC--hhhHHHHHHHHHHhcccCcEEEEec
Q 024100 231 YDVIWVQWCIGH-----LT--DDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 231 fDlIvs~~vl~h-----l~--d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
||+|++.-.... +. ......++.++.+.|+|||.++++.
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999998632211 10 1345589999999999999998754
No 238
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.13 E-value=1.7e-10 Score=109.42 Aligned_cols=107 Identities=14% Similarity=0.058 Sum_probs=82.1
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CCCCc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGR 230 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~ 230 (272)
..++.+|||+|||+|..+..++ +.. ..|+++|+|+.+++.+++++... ..++.++++|+.+++ +++++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la-~~~~~~~v~a~D~~~~~l~~~~~~~~~~-------g~~~~~~~~D~~~~~~~~~~~~ 315 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHIL-EVAPEAQVVAVDIDEQRLSRVYDNLKRL-------GMKATVKQGDGRYPSQWCGEQQ 315 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHH-HHCTTCEEEEEESSTTTHHHHHHHHHHT-------TCCCEEEECCTTCTHHHHTTCC
T ss_pred CCCcCeEEEECCCchHHHHHHH-HHcCCCEEEEECCCHHHHHHHHHHHHHc-------CCCeEEEeCchhhchhhcccCC
Confidence 3467799999999999999885 544 48999999999999999987542 224789999998875 34468
Q ss_pred ceeeEe------chhhhhcChh-------h-------HHHHHHHHHHhcccCcEEEEec
Q 024100 231 YDVIWV------QWCIGHLTDD-------D-------FVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 231 fDlIvs------~~vl~hl~d~-------~-------~~~~l~~~~r~LkpgG~liv~E 269 (272)
||+|++ ..++++.++. + ...+++++.+.|+|||.++.+.
T Consensus 316 fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999995 2345443332 1 1478999999999999988653
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.13 E-value=2.1e-10 Score=105.39 Aligned_cols=104 Identities=11% Similarity=0.111 Sum_probs=80.8
Q ss_pred CCCeeeEeecccchHHHHHHHhcC------CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGR 230 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~------~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 230 (272)
+..+|||+|||+|.++..++.... .+++|+|+++.+++.|+.++... ..+++++++|.....+ .++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~-------g~~~~i~~~D~l~~~~-~~~ 201 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ-------RQKMTLLHQDGLANLL-VDP 201 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH-------TCCCEEEESCTTSCCC-CCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC-------CCCceEEECCCCCccc-cCC
Confidence 456999999999999997753321 57999999999999999986432 1257899999866443 368
Q ss_pred ceeeEechhhhhcChhhH----------------HHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHLTDDDF----------------VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~----------------~~~l~~~~r~LkpgG~liv~ 268 (272)
||+|+++-.+++++.++. ..++.++.+.|+|||.+++.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 999999988777654432 25899999999999987653
No 240
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.12 E-value=1.6e-10 Score=104.02 Aligned_cols=100 Identities=14% Similarity=0.166 Sum_probs=80.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.++.+|||+|||+|.++..++.....+|+++|.|+.+++.+++++..- +...+++++++|..++... +.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N-----~v~~~v~~~~~D~~~~~~~-~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN-----KVEDRMSAYNMDNRDFPGE-NIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHT-----TCTTTEEEECSCTTTCCCC-SCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEeCcHHHhccc-cCCCEEE
Confidence 467799999999999999885333468999999999999999998542 2345799999999988754 6899999
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
++... ... .++..+.+.|+|||.+.+
T Consensus 198 ~~~p~----~~~--~~l~~a~~~lk~gG~ih~ 223 (278)
T 3k6r_A 198 MGYVV----RTH--EFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp ECCCS----SGG--GGHHHHHHHEEEEEEEEE
T ss_pred ECCCC----cHH--HHHHHHHHHcCCCCEEEE
Confidence 87431 233 688888899999998854
No 241
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.11 E-value=1.1e-12 Score=115.04 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=76.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-Cccee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fDl 233 (272)
..++.+|||+|||+|.++..+ ++.+.+|+++|+|+.|++.|++++. ...+++++++|+.+++++. ++| .
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l-~~~~~~v~~id~~~~~~~~a~~~~~--------~~~~v~~~~~D~~~~~~~~~~~f-~ 96 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKL-AKISKQVTSIELDSHLFNLSSEKLK--------LNTRVTLIHQDILQFQFPNKQRY-K 96 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHH-HHHSSEEEESSSSCSSSSSSSCTTT--------TCSEEEECCSCCTTTTCCCSSEE-E
T ss_pred CCCCCEEEEEeCCCCHHHHHH-HHhCCeEEEEECCHHHHHHHHHHhc--------cCCceEEEECChhhcCcccCCCc-E
Confidence 346679999999999999988 4667899999999999999887653 2358999999999887653 588 6
Q ss_pred eEechh-----------hhhcChhhHHHHH----HHHHHhcccCcEEEE
Q 024100 234 IWVQWC-----------IGHLTDDDFVSFF----KRAKENIARSGTFLL 267 (272)
Q Consensus 234 Ivs~~v-----------l~hl~d~~~~~~l----~~~~r~LkpgG~liv 267 (272)
|+++-. +.|..+.. .+| +.+.++|+|||.+++
T Consensus 97 vv~n~Py~~~~~~~~~~~~~~~~~~--~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 97 IVGNIPYHLSTQIIKKVVFESRASD--IYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp EEEECCSSSCHHHHHHHHHHCCCEE--EEEEEESSHHHHHHCGGGSHHH
T ss_pred EEEeCCccccHHHHHHHHhCCCCCe--EEEEeeHHHHHHHhCCCCchhh
Confidence 666532 23322332 445 678999999997643
No 242
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.11 E-value=9e-11 Score=106.58 Aligned_cols=89 Identities=12% Similarity=0.082 Sum_probs=71.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
..++.+|||||||+|.+|..|+ +...+|++||.++.|++.+++++.. ..+++++++|+.++++++.+||+|
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La-~~~~~V~aVEid~~li~~a~~~~~~--------~~~v~vi~gD~l~~~~~~~~fD~I 118 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELA-KNAKKVYVIEIDKSLEPYANKLKEL--------YNNIEIIWGDALKVDLNKLDFNKV 118 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHSSEEEEEESCGGGHHHHHHHHHH--------CSSEEEEESCTTTSCGGGSCCSEE
T ss_pred CCCcCEEEEECCCchHHHHHHH-hcCCEEEEEECCHHHHHHHHHHhcc--------CCCeEEEECchhhCCcccCCccEE
Confidence 4567799999999999999885 6688999999999999999998742 358999999999987766689999
Q ss_pred EechhhhhcChhhHHHHHH
Q 024100 235 WVQWCIGHLTDDDFVSFFK 253 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~ 253 (272)
+++... |++.+-+.+++.
T Consensus 119 v~NlPy-~is~pil~~lL~ 136 (295)
T 3gru_A 119 VANLPY-QISSPITFKLIK 136 (295)
T ss_dssp EEECCG-GGHHHHHHHHHH
T ss_pred EEeCcc-cccHHHHHHHHh
Confidence 988765 444444334443
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.11 E-value=1.4e-10 Score=106.64 Aligned_cols=97 Identities=8% Similarity=0.144 Sum_probs=78.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++.. + +...+|+++|.|+.+++.|++++... ....+++++++|+.++. ++||+|++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a-~~~~~V~~vD~s~~ai~~a~~n~~~n-----~l~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-C-KNAKKIYAIDINPHAIELLKKNIKLN-----KLEHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-T-TTSSEEEEEESCHHHHHHHHHHHHHT-----TCTTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCEEEEccCccCHHHHh-c-cCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcEEEEECChHHhc---CCCcEEEE
Confidence 567999999999999997 5 56779999999999999999987542 12247999999998875 68999998
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.... + .. .++..+.+.|+|||.++..+
T Consensus 265 dpP~-~---~~--~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 265 NLPK-F---AH--KFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp CCTT-T---GG--GGHHHHHHHEEEEEEEEEEE
T ss_pred CCcH-h---HH--HHHHHHHHHcCCCCEEEEEE
Confidence 7432 1 12 68999999999999887653
No 244
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.10 E-value=3.5e-10 Score=99.40 Aligned_cols=74 Identities=22% Similarity=0.266 Sum_probs=59.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-Cccee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fDl 233 (272)
..++.+|||+|||+|.++..++ +.+.+|+++|+|+.|++.+++++.. ..+++++++|+.++++++ ..| .
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~-~~~~~v~~vD~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~~-~ 97 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELV-QRCNFVTAIEIDHKLCKTTENKLVD--------HDNFQVLNKDILQFKFPKNQSY-K 97 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHH-HHSSEEEEECSCHHHHHHHHHHTTT--------CCSEEEECCCGGGCCCCSSCCC-E
T ss_pred CCCCCEEEEEeCCchHHHHHHH-HcCCeEEEEECCHHHHHHHHHhhcc--------CCCeEEEEChHHhCCcccCCCe-E
Confidence 4567799999999999999885 6678999999999999999998742 257999999999887653 355 4
Q ss_pred eEech
Q 024100 234 IWVQW 238 (272)
Q Consensus 234 Ivs~~ 238 (272)
|+++.
T Consensus 98 vv~nl 102 (244)
T 1qam_A 98 IFGNI 102 (244)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 55543
No 245
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.10 E-value=8.8e-11 Score=110.58 Aligned_cols=104 Identities=13% Similarity=-0.023 Sum_probs=76.4
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CCCCcceeeE
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fDlIv 235 (272)
++.+|||+|||+|.++..+ ++.+..|+++|.|+.|++.|++++... ....++.++|+.++. ...+.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~-a~~ga~V~avDis~~al~~a~~n~~~n-------g~~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRA-ARKGAYALAVDKDLEALGVLDQAALRL-------GLRVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHHH-------TCCCEEEESCHHHHHHTCCCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHH-HHcCCeEEEEECCHHHHHHHHHHHHHh-------CCCCcEEEccHHHHHHHhcCCCCEEE
Confidence 4679999999999999988 466777999999999999999987532 112357788886642 1123599999
Q ss_pred echhhhhcC-------hhhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQWCIGHLT-------DDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~-------d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+.-....-+ -.+...++..+.+.|+|||.++..
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~ 325 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLS 325 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 864321110 123458999999999999999744
No 246
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.09 E-value=1.2e-10 Score=117.18 Aligned_cols=107 Identities=15% Similarity=0.187 Sum_probs=81.4
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCC-CceEEEEeCCCCC-CCCCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCVPLQDF-TPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~-~~v~~~~~d~~~~-~~~~~~fDlI 234 (272)
++.+|||+|||||.++..++.....+|++||.|+.|++.|++++... +.. .+++++++|+.++ +...++||+|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~n-----gl~~~~v~~i~~D~~~~l~~~~~~fD~I 613 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN-----GLTGRAHRLIQADCLAWLREANEQFDLI 613 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----TCCSTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc-----CCCccceEEEecCHHHHHHhcCCCccEE
Confidence 45699999999999999885333446999999999999999997532 112 4799999998774 2234689999
Q ss_pred Eechh-----------hhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 235 WVQWC-----------IGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 235 vs~~v-----------l~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
++.-. +.+ ..+...++..+.++|+|||.++++-+
T Consensus 614 i~DPP~f~~~~~~~~~~~~--~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDV--QRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp EECCCSBC-------CCBH--HHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCccccCCccchhHHHH--HHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 98542 112 13456899999999999999986543
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.09 E-value=8.3e-10 Score=104.88 Aligned_cols=101 Identities=13% Similarity=0.116 Sum_probs=75.4
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC----CCCCcc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~f 231 (272)
.+..+|||+|||+|.++..| ++...+|+++|+|+.|++.|++++... ...+++|+++|+.+.. ..+++|
T Consensus 285 ~~~~~VLDlgcG~G~~~~~l-a~~~~~V~gvD~s~~al~~A~~n~~~~------~~~~v~f~~~d~~~~l~~~~~~~~~f 357 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPL-ATQAASVVGVEGVPALVEKGQQNARLN------GLQNVTFYHENLEEDVTKQPWAKNGF 357 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHH-HTTSSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCTTSCCSSSGGGTTCC
T ss_pred CCCCEEEECCCCCCHHHHHH-HhhCCEEEEEeCCHHHHHHHHHHHHHc------CCCceEEEECCHHHHhhhhhhhcCCC
Confidence 45679999999999999988 577889999999999999999987432 2348999999998742 234689
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
|+|+++-.-.-+ ..+++.+.+ ++|++.++++-
T Consensus 358 D~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 358 DKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp SEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEES
T ss_pred CEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEEC
Confidence 999986442111 134444443 68888887764
No 248
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.08 E-value=1.1e-10 Score=112.01 Aligned_cols=107 Identities=11% Similarity=0.020 Sum_probs=79.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-CCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~f 231 (272)
..++.+|||+|||+|..|..+++... ..|+++|+|+.+++.+++++... ... +.++++|+.++.. .+++|
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~------G~~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW------GAP-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH------CCC-CEEECSCHHHHHHHHCSCE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------CCe-EEEEECCHHHhhhhccccC
Confidence 34677999999999999998854432 47999999999999999998643 234 8899999877642 34689
Q ss_pred eeeEec------hhhhhcChh-------h-------HHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQ------WCIGHLTDD-------D-------FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~------~vl~hl~d~-------~-------~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|++. .++.+-++. + ..++|+++.+.|+|||.++.+
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvys 228 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYS 228 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999951 233332221 1 157999999999999998753
No 249
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.06 E-value=2.8e-10 Score=102.07 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=71.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-Cccee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fDl 233 (272)
..++ +|||||||+|.+|..|+ +.+.+|+++|.++.|++.+++++. ..+++++++|+.++++++ ..+|.
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~-~~~~~V~avEid~~~~~~l~~~~~---------~~~v~vi~~D~l~~~~~~~~~~~~ 113 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALL-EAGAEVTAIEKDLRLRPVLEETLS---------GLPVRLVFQDALLYPWEEVPQGSL 113 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHH-HTTCCEEEEESCGGGHHHHHHHTT---------TSSEEEEESCGGGSCGGGSCTTEE
T ss_pred CCCC-eEEEEeCchHHHHHHHH-HcCCEEEEEECCHHHHHHHHHhcC---------CCCEEEEECChhhCChhhccCccE
Confidence 4556 99999999999999884 777899999999999999999873 257999999999887653 26899
Q ss_pred eEechhhhhcChhhHHHHHHH
Q 024100 234 IWVQWCIGHLTDDDFVSFFKR 254 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~ 254 (272)
|+++... +++.+-+.+++..
T Consensus 114 iv~NlPy-~iss~il~~ll~~ 133 (271)
T 3fut_A 114 LVANLPY-HIATPLVTRLLKT 133 (271)
T ss_dssp EEEEECS-SCCHHHHHHHHHH
T ss_pred EEecCcc-cccHHHHHHHhcC
Confidence 9988775 6666665566654
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.06 E-value=6.9e-10 Score=105.48 Aligned_cols=97 Identities=16% Similarity=0.137 Sum_probs=75.3
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
++.+|||+|||+|.++..+ ++.+.+|+++|.|+.|++.|++++... ... ++|+++|+.++.+. +||+|++
T Consensus 290 ~~~~VLDlgcG~G~~sl~l-a~~~~~V~gvD~s~~ai~~A~~n~~~n------gl~-v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYL-AKRGFNVKGFDSNEFAIEMARRNVEIN------NVD-AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp CSSEEEEETCTTTHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHHH------TCC-EEEEECCTTTCCCT--TCSEEEE
T ss_pred CCCEEEEeeccchHHHHHH-HHcCCEEEEEECCHHHHHHHHHHHHHc------CCc-EEEEECChHHcCcc--CCCEEEE
Confidence 5669999999999999987 577889999999999999999987431 123 89999999987533 8999998
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.-.-..+ .+ .+++.+. .|+|+|.++++
T Consensus 360 dPPr~g~--~~--~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 360 DPPRAGL--HP--RLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp CCCTTCS--CH--HHHHHHH-HHCCSEEEEEE
T ss_pred cCCccch--HH--HHHHHHH-hcCCCcEEEEE
Confidence 6542221 11 3555554 48999999886
No 251
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.02 E-value=2.7e-10 Score=109.27 Aligned_cols=107 Identities=12% Similarity=0.049 Sum_probs=79.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-CCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~f 231 (272)
..++.+|||+|||+|..|..+++.. ...|+++|+|+.+++.+++++... ...++.+.++|..++.. .+++|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~------g~~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW------GVSNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH------TCSSEEEECCCHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCceEEEeCCHHHhhhhccccC
Confidence 3567799999999999999885443 248999999999999999998653 23578999999877641 24689
Q ss_pred eeeEech------hhhhcCh-------h-------hHHHHHHHHHHhcccCcEEEE
Q 024100 232 DVIWVQW------CIGHLTD-------D-------DFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 232 DlIvs~~------vl~hl~d-------~-------~~~~~l~~~~r~LkpgG~liv 267 (272)
|+|++.- ++.+-++ . ...++|.++.+.|+|||.++.
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvY 232 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIY 232 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 9999632 2222111 0 112789999999999999875
No 252
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.99 E-value=1.1e-09 Score=97.36 Aligned_cols=88 Identities=11% Similarity=0.175 Sum_probs=68.0
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC----Cc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET----GR 230 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~----~~ 230 (272)
..++.+|||||||+|.+|..| ++.+.+|+++|.++.|++.+++++.. ..+++++++|+.+++++. ++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~L-a~~~~~V~avEid~~~~~~~~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~~~ 97 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYL-LTECDNLALVEIDRDLVAFLQKKYNQ--------QKNITIYQNDALQFDFSSVKTDKP 97 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHH-TTTSSEEEEEECCHHHHHHHHHHHTT--------CTTEEEEESCTTTCCGGGSCCSSC
T ss_pred CCCcCEEEEEcccccHHHHHH-HHhCCEEEEEECCHHHHHHHHHHHhh--------CCCcEEEEcchHhCCHHHhccCCC
Confidence 456779999999999999988 57778999999999999999998742 358999999999887532 46
Q ss_pred ceeeEechhhhhcChhhHHHHHH
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFK 253 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~ 253 (272)
|| |+++.-. +++.+-+.+++.
T Consensus 98 ~~-vv~NlPY-~is~~il~~ll~ 118 (255)
T 3tqs_A 98 LR-VVGNLPY-NISTPLLFHLFS 118 (255)
T ss_dssp EE-EEEECCH-HHHHHHHHHHHH
T ss_pred eE-EEecCCc-ccCHHHHHHHHh
Confidence 88 7777654 444444334443
No 253
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.97 E-value=8.8e-10 Score=102.56 Aligned_cols=112 Identities=12% Similarity=0.063 Sum_probs=78.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCC---CceEEEEeCCCCCCC----CC
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH---KATNFFCVPLQDFTP----ET 228 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~---~~v~~~~~d~~~~~~----~~ 228 (272)
+.+.+||+||||+|.++..+++....+|++||+++.+++.|++++...... .-.. .+++++.+|..++.. ..
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~-~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGD-VLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC-----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccc-cccccCCCcEEEEECcHHHHHHhhhccC
Confidence 357799999999999999986443458999999999999999998532100 0011 379999999877642 24
Q ss_pred CcceeeEechhh-hhcChh---hHHHHHHHH----HHhcccCcEEEEe
Q 024100 229 GRYDVIWVQWCI-GHLTDD---DFVSFFKRA----KENIARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~~vl-~hl~d~---~~~~~l~~~----~r~LkpgG~liv~ 268 (272)
++||+|++...- ..-..+ --.+|++.+ .++|+|||.++..
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 689999976431 100011 113566666 9999999998754
No 254
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.95 E-value=5.5e-10 Score=103.89 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=71.1
Q ss_pred CCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC--CC-------
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ET------- 228 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~--~~------- 228 (272)
+.+|||+|||+|.++..+ ++.+.+|+++|.|+.|++.|++++... ...+++|+++|++++.. ..
T Consensus 214 ~~~vLDl~cG~G~~~l~l-a~~~~~V~gvd~~~~ai~~a~~n~~~n------g~~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLAL-ARNFDRVLATEIAKPSVAAAQYNIAAN------HIDNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CSEEEEESCTTSHHHHHH-GGGSSEEEEECCCHHHHHHHHHHHHHT------TCCSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCEEEEccCCCCHHHHHH-HhcCCEEEEEECCHHHHHHHHHHHHHc------CCCceEEEECCHHHHHHHHhhccccccc
Confidence 468999999999999976 678889999999999999999987532 23579999999876521 11
Q ss_pred -------CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 229 -------GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 229 -------~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+||+|++.-.- ..+..++.+.|+++|.++..
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr--------~g~~~~~~~~l~~~g~ivyv 325 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPR--------SGLDSETEKMVQAYPRILYI 325 (369)
T ss_dssp GGSCGGGCCEEEEEECCCT--------TCCCHHHHHHHTTSSEEEEE
T ss_pred cccccccCCCCEEEECcCc--------cccHHHHHHHHhCCCEEEEE
Confidence 279999864321 12344566667788877643
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.93 E-value=1.9e-09 Score=101.38 Aligned_cols=106 Identities=13% Similarity=0.131 Sum_probs=79.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC----------------------------------------CcEEEEeCCHHHHH
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF----------------------------------------NEVDLLEPVSHFLD 194 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~----------------------------------------~~v~~vD~S~~mld 194 (272)
..+...+||.+||+|.++.+++ ... ..|+++|.|+.|++
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa-~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~ 277 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAA-LIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIE 277 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHH-HHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHH-HHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHH
Confidence 4566789999999999998774 332 24999999999999
Q ss_pred HHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEechhhh-hcC-hhhHHHHHHHHHHhccc--CcEEEE
Q 024100 195 AARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIG-HLT-DDDFVSFFKRAKENIAR--SGTFLL 267 (272)
Q Consensus 195 ~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~vl~-hl~-d~~~~~~l~~~~r~Lkp--gG~liv 267 (272)
.|++++... +....++|.++|+.+++++ .+||+|+++--++ .+. ..++..+.+.+.+.|++ ||.+++
T Consensus 278 ~Ar~Na~~~-----gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 278 IAKQNAVEA-----GLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp HHHHHHHHT-----TCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred HHHHHHHHc-----CCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 999998643 1234699999999988765 5899999994321 222 24566788888877776 776544
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.91 E-value=4.8e-09 Score=98.45 Aligned_cols=106 Identities=14% Similarity=0.115 Sum_probs=80.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC----------------------------------------CcEEEEeCCHHHHH
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF----------------------------------------NEVDLLEPVSHFLD 194 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~----------------------------------------~~v~~vD~S~~mld 194 (272)
..+...+||.+||+|.+..+.+ ... ..++++|.|+.|++
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa-~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~ 270 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAA-MIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVE 270 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHH-HHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHH-HHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHH
Confidence 4566799999999999998774 332 24999999999999
Q ss_pred HHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEechhhh-hc-ChhhHHHHHHHHHHhccc--CcEEEE
Q 024100 195 AARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIG-HL-TDDDFVSFFKRAKENIAR--SGTFLL 267 (272)
Q Consensus 195 ~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~vl~-hl-~d~~~~~~l~~~~r~Lkp--gG~liv 267 (272)
.|++++... +....++|.++|+.+++++ .+||+|+++--++ .+ ...++..+++.+.+.|++ ||.+++
T Consensus 271 ~Ar~Na~~~-----gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 271 IARKNAREV-----GLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp HHHHHHHHT-----TCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHc-----CCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 999998643 2234699999999998765 4899999984322 23 335677888888888876 776543
No 257
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.90 E-value=2.1e-09 Score=100.46 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=71.4
Q ss_pred CCCeeeEeecccchHHHHHHHh--cCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~--~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
++.+|||+|||+|.++..++.. ...+++++|+++.+++.| .+++++++|+.++.+. ++||+|
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------~~~~~~~~D~~~~~~~-~~fD~I 102 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------PWAEGILADFLLWEPG-EAFDLI 102 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------TTEEEEESCGGGCCCS-SCEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------CCCcEEeCChhhcCcc-CCCCEE
Confidence 4569999999999999988533 246899999999988655 2578999999887643 589999
Q ss_pred Eechhhh----------hcChhh-----------------HHHHHHHHHHhcccCcEEEE
Q 024100 235 WVQWCIG----------HLTDDD-----------------FVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 235 vs~~vl~----------hl~d~~-----------------~~~~l~~~~r~LkpgG~liv 267 (272)
+++-.+. |+.++. ...++.++.+.|+|||.+++
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 9962221 122221 22679999999999998754
No 258
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.89 E-value=3.7e-09 Score=100.59 Aligned_cols=107 Identities=12% Similarity=0.060 Sum_probs=79.5
Q ss_pred CCCCeeeEeecccchHHHHHHHh--------------cCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCC
Q 024100 156 NQHLVALDCGSGIGRITKNLLIR--------------YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~--------------~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~ 221 (272)
.+..+|||.|||+|.++..++.. ....+.|+|.++.+++.|+.++.... ....++++.++|.
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g----~~~~~~~i~~gD~ 245 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG----IGTDRSPIVCEDS 245 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT----CCSSCCSEEECCT
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC----CCcCCCCEeeCCC
Confidence 34569999999999999877432 13589999999999999998764321 0011678999998
Q ss_pred CCCCCCCCcceeeEechhhhhcChhh---------------HHHHHHHHHHhcccCcEEEE
Q 024100 222 QDFTPETGRYDVIWVQWCIGHLTDDD---------------FVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 222 ~~~~~~~~~fDlIvs~~vl~hl~d~~---------------~~~~l~~~~r~LkpgG~liv 267 (272)
...+.. .+||+|+++-.+++..+.+ -..|++++.+.|+|||.+.+
T Consensus 246 l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 246 LEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp TTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 776544 4899999987766543211 13799999999999998754
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.82 E-value=8.8e-09 Score=96.58 Aligned_cols=106 Identities=17% Similarity=0.144 Sum_probs=80.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC----------------------------------------CcEEEEeCCHHHHH
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF----------------------------------------NEVDLLEPVSHFLD 194 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~----------------------------------------~~v~~vD~S~~mld 194 (272)
..+..+|||.|||+|.++.+++ ... ..|+++|.|+.|++
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa-~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~ 271 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAA-MIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESID 271 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHH-HHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHH-HHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHH
Confidence 4567799999999999999874 332 36999999999999
Q ss_pred HHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEechhhh-hcC-hhhHHHHHHHHHHhccc--CcEEEE
Q 024100 195 AARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIG-HLT-DDDFVSFFKRAKENIAR--SGTFLL 267 (272)
Q Consensus 195 ~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~vl~-hl~-d~~~~~~l~~~~r~Lkp--gG~liv 267 (272)
.|++++... +...+++|.++|+.+++++ ++||+|+++-.++ .+. .+++..+++++.+.|++ ||.+++
T Consensus 272 ~Ar~Na~~~-----gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 272 IARENAEIA-----GVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp HHHHHHHHH-----TCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred HHHHHHHHc-----CCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 999997543 1234799999999998764 5899999976542 222 24566788888888876 776543
No 260
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.78 E-value=9.7e-09 Score=92.96 Aligned_cols=91 Identities=10% Similarity=0.093 Sum_probs=65.8
Q ss_pred CCCCCeeeEeec------ccchHHHHHHHhc---CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEE-EEeCCCCC
Q 024100 155 NNQHLVALDCGS------GIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF-FCVPLQDF 224 (272)
Q Consensus 155 ~~~~~~VLDiGc------GtG~~t~~LLa~~---~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~-~~~d~~~~ 224 (272)
+.++.+|||+|| |+|. . ++++. ...|+++|+|+. + .+++| +++|+.++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~-~~a~~~~~~~~V~gvDis~~--------v-----------~~v~~~i~gD~~~~ 118 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--A-VLRQWLPTGTLLVDSDLNDF--------V-----------SDADSTLIGDCATV 118 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--H-HHHHHSCTTCEEEEEESSCC--------B-----------CSSSEEEESCGGGC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--H-HHHHHcCCCCEEEEEECCCC--------C-----------CCCEEEEECccccC
Confidence 567789999999 5576 2 22343 358999999987 2 15778 99999887
Q ss_pred CCCCCcceeeEechhhh--------hcCh-hhHHHHHHHHHHhcccCcEEEEe
Q 024100 225 TPETGRYDVIWVQWCIG--------HLTD-DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 225 ~~~~~~fDlIvs~~vl~--------hl~d-~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++. ++||+|+++...+ |... ..+..+|+++.++|+|||.|++.
T Consensus 119 ~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 119 HTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp CCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ccc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 654 6899999874321 1111 22457999999999999999874
No 261
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.76 E-value=2.9e-09 Score=94.62 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=60.4
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCH-------HHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC--CC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PE 227 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~-------~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~--~~ 227 (272)
++.+|||+|||+|..+..+ ++.+.+|+++|.|+ .|++.|++++... ....+++++++|+.++. ++
T Consensus 83 ~~~~VLDlgcG~G~~a~~l-A~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~-----~~~~ri~~~~~d~~~~l~~~~ 156 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVL-ASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQ-----DTAARINLHFGNAAEQMPALV 156 (258)
T ss_dssp GCCCEEETTCTTCHHHHHH-HHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHH-----HHHTTEEEEESCHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHH-HHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhh-----CCccCeEEEECCHHHHHHhhh
Confidence 4568999999999999977 57788999999999 9999998775321 01134999999998752 22
Q ss_pred C--CcceeeEechhhhh
Q 024100 228 T--GRYDVIWVQWCIGH 242 (272)
Q Consensus 228 ~--~~fDlIvs~~vl~h 242 (272)
+ ++||+|++.-.++|
T Consensus 157 ~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHCCCSEEEECCCC--
T ss_pred ccCCCccEEEECCCCCC
Confidence 2 58999999655544
No 262
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.74 E-value=8.5e-09 Score=91.35 Aligned_cols=86 Identities=8% Similarity=0.096 Sum_probs=62.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCc--EEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC----
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---- 228 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~--v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~---- 228 (272)
..++.+|||||||+|.+|. + ++ +.+ |+++|+++.|++.+++++.. ..+++++++|+.++++++
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l-~~-~~~~~v~avEid~~~~~~a~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-P-VG-ERLDQLTVIELDRDLAARLQTHPFL--------GPKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-H-HH-TTCSCEEEECCCHHHHHHHHTCTTT--------GGGEEEECSCGGGCCHHHHHHH
T ss_pred CCCcCEEEEECCCCcHHHH-h-hh-CCCCeEEEEECCHHHHHHHHHHhcc--------CCceEEEECchhhCCHHHhhcc
Confidence 3466799999999999999 6 45 567 99999999999999987632 258999999998876532
Q ss_pred -CcceeeEechhhhhcChhhHHHHH
Q 024100 229 -GRYDVIWVQWCIGHLTDDDFVSFF 252 (272)
Q Consensus 229 -~~fDlIvs~~vl~hl~d~~~~~~l 252 (272)
+..|.|+++... +++.+-+.+++
T Consensus 88 ~~~~~~vvsNlPY-~i~~~il~~ll 111 (252)
T 1qyr_A 88 MGQPLRVFGNLPY-NISTPLMFHLF 111 (252)
T ss_dssp HTSCEEEEEECCT-TTHHHHHHHHH
T ss_pred cCCceEEEECCCC-CccHHHHHHHH
Confidence 124677776553 44444333333
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.73 E-value=4e-08 Score=89.56 Aligned_cols=76 Identities=12% Similarity=0.040 Sum_probs=60.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC---C
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---G 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~ 229 (272)
..++.+|||+|||+|..|..++... ...|+++|.++.+++.+++++... ...++.++++|+.++.... +
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~------g~~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA------GVSCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT------TCCSEEEEECCGGGSCTTCGGGT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------CCCeEEEEeCChHhcCccccccC
Confidence 3467799999999999999885432 358999999999999999998653 2357999999988765422 4
Q ss_pred cceeeEe
Q 024100 230 RYDVIWV 236 (272)
Q Consensus 230 ~fDlIvs 236 (272)
+||.|++
T Consensus 174 ~fD~Vl~ 180 (309)
T 2b9e_A 174 EVHYILL 180 (309)
T ss_dssp TEEEEEE
T ss_pred CCCEEEE
Confidence 7999996
No 264
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.71 E-value=1.3e-08 Score=89.91 Aligned_cols=81 Identities=10% Similarity=0.096 Sum_probs=60.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCC-cce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-RYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~fD 232 (272)
..++.+|||+|||+|.+|..+ ++. ..+|+++|.|+.|++.++++ . ..+++++++|+.++++++. ...
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L-~~~~~~~v~avEid~~~~~~~~~~-~---------~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVL-LQHPLKKLYVIELDREMVENLKSI-G---------DERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHH-TTSCCSEEEEECCCHHHHHHHTTS-C---------CTTEEEECSCTTTCCGGGSCSSE
T ss_pred CCCcCEEEEEcCchHHHHHHH-HHcCCCeEEEEECCHHHHHHHHhc-c---------CCCeEEEEcchhhCChhHccCCc
Confidence 456779999999999999988 466 47999999999999999875 2 2478999999998876531 122
Q ss_pred eeEechhhhhcChhh
Q 024100 233 VIWVQWCIGHLTDDD 247 (272)
Q Consensus 233 lIvs~~vl~hl~d~~ 247 (272)
.|+++... +++.+-
T Consensus 98 ~vv~NlPy-~i~~~i 111 (249)
T 3ftd_A 98 KVVGNLPY-NVASLI 111 (249)
T ss_dssp EEEEECCT-TTHHHH
T ss_pred EEEEECch-hccHHH
Confidence 55555544 554443
No 265
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.71 E-value=8.6e-08 Score=86.82 Aligned_cols=108 Identities=17% Similarity=0.230 Sum_probs=81.6
Q ss_pred CCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CCCCcce
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD 232 (272)
+.+.+||=||.|.|.++++++ +. ..+|++||+++.+++.|++.+..... ..-..++++++.+|...+- -..++||
T Consensus 82 p~pk~VLIiGgGdG~~~revl-k~~~v~~v~~VEID~~Vv~~a~~~lp~~~~-~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVT-RHKNVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHH-TCTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCeEEEECCCchHHHHHHH-HcCCcceEEEEcCCHHHHHHHHhcCccccc-cccCCCcEEEEechHHHHHhhccccCC
Confidence 457799999999999999996 54 46899999999999999998743210 0123578999999998763 2346999
Q ss_pred eeEechh-----hhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWC-----IGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~v-----l~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|++-.. -.++-.. +|++.|+++|+|||.++..
T Consensus 160 vIi~D~~dp~~~~~~L~t~---eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTS---AFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEESCCCCCCTTCCSSCC---HHHHHHHHTEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCH---HHHHHHHHHhCCCCEEEEe
Confidence 9995422 1122222 6999999999999998864
No 266
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.69 E-value=1.8e-08 Score=90.63 Aligned_cols=80 Identities=9% Similarity=0.088 Sum_probs=60.6
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCc----EEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCC-
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNE----VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG- 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~----v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~- 229 (272)
..++.+|||||||+|.+|..|+ +.+.. |+++|+|+.|++.++++. ..+++++++|+.++++++-
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La-~~~~~~~~~V~avDid~~~l~~a~~~~----------~~~v~~i~~D~~~~~~~~~~ 108 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVI-ARLATPGSPLHAVELDRDLIGRLEQRF----------GELLELHAGDALTFDFGSIA 108 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHH-HHHCBTTBCEEEEECCHHHHHHHHHHH----------GGGEEEEESCGGGCCGGGGS
T ss_pred CCCcCEEEEEccccHHHHHHHH-HhCCCcCCeEEEEECCHHHHHHHHHhc----------CCCcEEEECChhcCChhHhc
Confidence 4567799999999999999885 66666 999999999999999873 2479999999988876431
Q ss_pred -----cceeeEechhhhhcChh
Q 024100 230 -----RYDVIWVQWCIGHLTDD 246 (272)
Q Consensus 230 -----~fDlIvs~~vl~hl~d~ 246 (272)
..+.|+++.-. +++.+
T Consensus 109 ~~~~~~~~~vv~NlPY-~iss~ 129 (279)
T 3uzu_A 109 RPGDEPSLRIIGNLPY-NISSP 129 (279)
T ss_dssp CSSSSCCEEEEEECCH-HHHHH
T ss_pred ccccCCceEEEEccCc-cccHH
Confidence 22356666543 44333
No 267
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.68 E-value=1.6e-07 Score=87.74 Aligned_cols=112 Identities=15% Similarity=0.191 Sum_probs=66.8
Q ss_pred CCCeeeEeecccchHHHHHHHh-------cC-------C--cEEEEeCCHHHHHHHHHhccccCCCC------CCCCCce
Q 024100 157 QHLVALDCGSGIGRITKNLLIR-------YF-------N--EVDLLEPVSHFLDAARESLAPENHMA------PDMHKAT 214 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~-------~~-------~--~v~~vD~S~~mld~A~~~l~~~~~~~------~~~~~~v 214 (272)
.+.+|+|+|||+|..|..++.. .+ + +|...|.-...-+.-=+.+....... .......
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 4679999999999999966321 11 2 44555633333222222232211000 0000011
Q ss_pred EEEE---eCCCCCCCCCCcceeeEechhhhhcCh-h-----------------------------------hHHHHHHHH
Q 024100 215 NFFC---VPLQDFTPETGRYDVIWVQWCIGHLTD-D-----------------------------------DFVSFFKRA 255 (272)
Q Consensus 215 ~~~~---~d~~~~~~~~~~fDlIvs~~vl~hl~d-~-----------------------------------~~~~~l~~~ 255 (272)
.|.. +.+..-.+++++||+|+|+++||++.+ + |+..||+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333 333333456789999999999999873 1 566789999
Q ss_pred HHhcccCcEEEEe
Q 024100 256 KENIARSGTFLLS 268 (272)
Q Consensus 256 ~r~LkpgG~liv~ 268 (272)
++.|+|||.+++.
T Consensus 212 a~eL~pGG~mvl~ 224 (374)
T 3b5i_A 212 AAEVKRGGAMFLV 224 (374)
T ss_dssp HHHEEEEEEEEEE
T ss_pred HHHhCCCCEEEEE
Confidence 9999999998753
No 268
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.67 E-value=2.8e-08 Score=88.91 Aligned_cols=117 Identities=13% Similarity=0.035 Sum_probs=72.1
Q ss_pred HHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE
Q 024100 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (272)
Q Consensus 140 ~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~ 218 (272)
.-|.++..+.+ +.+..+|||+|||+|.++..++.+. ...|.++|++..+. ... .. ......++.++.
T Consensus 61 ~KL~ei~ek~~----l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~----~~p-i~---~~~~g~~ii~~~ 128 (277)
T 3evf_A 61 AKLRWFHERGY----VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH----EKP-MN---VQSLGWNIITFK 128 (277)
T ss_dssp HHHHHHHHTTS----SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC----CCC-CC---CCBTTGGGEEEE
T ss_pred HHHHHHHHhCC----CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc----ccc-cc---cCcCCCCeEEEe
Confidence 33555555432 5677899999999999999664222 33678888774431 000 00 000122555667
Q ss_pred eCCCCCCCCCCcceeeEechhhh---hcChh-hHHHHHHHHHHhcccC-cEEEEe
Q 024100 219 VPLQDFTPETGRYDVIWVQWCIG---HLTDD-DFVSFFKRAKENIARS-GTFLLS 268 (272)
Q Consensus 219 ~d~~~~~~~~~~fDlIvs~~vl~---hl~d~-~~~~~l~~~~r~Lkpg-G~liv~ 268 (272)
.+++...+.+++||+|+|..+.+ +..|. ....+|+.+.++|+|| |.|+++
T Consensus 129 ~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 129 DKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp CSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 76655555667899999987554 11121 1124578889999999 998863
No 269
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.64 E-value=2.5e-08 Score=93.40 Aligned_cols=106 Identities=13% Similarity=0.076 Sum_probs=76.0
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCC---C------CCCCceEEEEeCCCCCCC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMA---P------DMHKATNFFCVPLQDFTP 226 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~---~------~~~~~v~~~~~d~~~~~~ 226 (272)
++.+|||+|||+|..+..++... ..+|+++|.++.+++.+++++....... . ....+++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 35689999999999999886442 3579999999999999999985420000 0 012348999999866532
Q ss_pred -CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 -ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 -~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..++||+|++.- .. ... .++..+.+.|+|||.++++
T Consensus 127 ~~~~~fD~I~lDP-~~---~~~--~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 127 ERHRYFHFIDLDP-FG---SPM--EFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HSTTCEEEEEECC-SS---CCH--HHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-CC---CHH--HHHHHHHHhcCCCCEEEEE
Confidence 124799999642 21 123 7899999999999988764
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.63 E-value=2.6e-08 Score=90.49 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=60.4
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC--C---C
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--E---T 228 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~--~---~ 228 (272)
..++.+|||+|||+|..+..++... ..+|+++|.|+.|++.|++++... ..+++|+++|+.+++. . .
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-------g~~v~~v~~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-------SDRVSLFKVSYREADFLLKTLGI 96 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-------TTTEEEEECCGGGHHHHHHHTTC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEECCHHHHHHHHHhcCC
Confidence 3467799999999999999886433 469999999999999999987532 2589999999987641 1 1
Q ss_pred CcceeeEec
Q 024100 229 GRYDVIWVQ 237 (272)
Q Consensus 229 ~~fDlIvs~ 237 (272)
++||.|++.
T Consensus 97 ~~~D~Vl~D 105 (301)
T 1m6y_A 97 EKVDGILMD 105 (301)
T ss_dssp SCEEEEEEE
T ss_pred CCCCEEEEc
Confidence 479999974
No 271
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.60 E-value=4.5e-08 Score=92.08 Aligned_cols=101 Identities=12% Similarity=0.098 Sum_probs=76.5
Q ss_pred CCCeeeEeecccchHHHHHHHhc-C-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCc-eEEEEeCCCCCCC--CCCcc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCVPLQDFTP--ETGRY 231 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~-v~~~~~d~~~~~~--~~~~f 231 (272)
++.+|||++||+|.++..++.+. + ..|+++|.++.+++.+++++..- +...+ ++++++|+.++.. ..++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N-----gl~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN-----NIPEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT-----TCCGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCceEEEEeCCHHHHHHHhhCCCC
Confidence 45699999999999999886432 3 58999999999999999998542 11233 8999999865421 13579
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|++.- . .... .++..+.+.|+|||.++++
T Consensus 127 D~V~lDP-~---g~~~--~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 127 DYVDLDP-F---GTPV--PFIESVALSMKRGGILSLT 157 (392)
T ss_dssp EEEEECC-S---SCCH--HHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECC-C---cCHH--HHHHHHHHHhCCCCEEEEE
Confidence 9999875 1 1123 6888999999999988765
No 272
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.59 E-value=1.6e-08 Score=90.07 Aligned_cols=83 Identities=18% Similarity=0.086 Sum_probs=60.0
Q ss_pred CeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCC---CCceEEEEeCCCCCCC-CCCcceee
Q 024100 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDM---HKATNFFCVPLQDFTP-ETGRYDVI 234 (272)
Q Consensus 159 ~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~---~~~v~~~~~d~~~~~~-~~~~fDlI 234 (272)
.+|||+|||+|..+..+ ++.+.+|++||.++.+.+.+++++..++...... ..+++++++|..++.. ...+||+|
T Consensus 90 ~~VLDl~~G~G~dal~l-A~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVL-ASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHH-HHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHH-HHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 69999999999999977 4667799999999998777776654331110111 1479999999876421 12379999
Q ss_pred Eechhhhh
Q 024100 235 WVQWCIGH 242 (272)
Q Consensus 235 vs~~vl~h 242 (272)
++.-.+.+
T Consensus 169 ~lDP~y~~ 176 (258)
T 2oyr_A 169 YLDPMFPH 176 (258)
T ss_dssp EECCCCCC
T ss_pred EEcCCCCC
Confidence 99766644
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.59 E-value=1.9e-07 Score=92.66 Aligned_cols=103 Identities=10% Similarity=0.073 Sum_probs=73.1
Q ss_pred CCCeeeEeecccchHHH---HHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcc
Q 024100 157 QHLVALDCGSGIGRITK---NLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~---~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 231 (272)
....|||+|||+|-+.. ...++... +|.+||-|+ |...|++.... +.-...|+++.+|++++..+ +++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~-----N~~~dkVtVI~gd~eev~LP-EKV 429 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQF-----EEWGSQVTVVSSDMREWVAP-EKA 429 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHH-----HTTGGGEEEEESCTTTCCCS-SCE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHh-----ccCCCeEEEEeCcceeccCC-ccc
Confidence 34579999999998844 33223333 579999997 66777776532 23457899999999999876 599
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEE
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~li 266 (272)
|+|||-|.=..+-.+-....+....+.|||||.+|
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99998654222222333456666679999999875
No 274
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.57 E-value=4.6e-08 Score=87.71 Aligned_cols=182 Identities=12% Similarity=0.082 Sum_probs=89.0
Q ss_pred ceeecccCCC-CcccCCHHHHHHHHhcccccchhhhhHHHHHHHhhhhc-chhhhhccccCCCCCcchhhhhHHHHHHHH
Q 024100 68 AMEVSGLDSD-GKEFKNAEEMWREQIGEDGEQQEKKTQWYREGISYWEG-VEASVDGVLGGFGNVNEVDIKGSEAFLQML 145 (272)
Q Consensus 68 ~~~~~g~~~~-G~~~~~~~e~W~~~~~~~~~~~~~~~~~y~~~~~YW~~-~~~~~~~~lggy~~~s~~d~~~s~~~L~~l 145 (272)
.+.-+|+..- |-.-.++-+.||+.++.- +..+..-|.. ..-++- +....+....|-. . ..-...+..-|.++
T Consensus 9 ~~~~~~~~~g~~~~~~tlg~~wk~~ln~l---~k~~f~~y~~-~~i~e~~r~~ar~~l~~~~~-~-g~YrSRAAfKL~ei 82 (282)
T 3gcz_A 9 GLVPRGSHMGGTGSGMTPGEAWKKQLNKL---GKTQFEQYKR-SCILEVDRTHARDSLENGIQ-N-GIAVSRGSAKLRWM 82 (282)
T ss_dssp ---------------CCHHHHHHHHHHHC---CHHHHHHHHT-TTCEEECCHHHHHHHHHTCC-S-SBCSSTHHHHHHHH
T ss_pred CcccccccCCCCCCCCcHHHHHHHHHHhh---hHHHHHhhhh-hceeeccHHHHHHHHhcCCc-C-CCEecHHHHHHHHH
Confidence 3344555554 556677899999998751 0111122222 111111 0111111111111 1 11122333345566
Q ss_pred HhccCCCccCCCCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC
Q 024100 146 LSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (272)
Q Consensus 146 l~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~ 224 (272)
..+.+ +.+..+|||+|||+|.++..++.+. ...|+++|++..+...+... .....++.++..+.+..
T Consensus 83 ~eK~~----Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~--------~~~g~~ii~~~~~~dv~ 150 (282)
T 3gcz_A 83 EERGY----VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR--------TTLGWNLIRFKDKTDVF 150 (282)
T ss_dssp HHTTS----CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC--------CBTTGGGEEEECSCCGG
T ss_pred HHhcC----CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc--------ccCCCceEEeeCCcchh
Confidence 55432 5677899999999999999664232 23678888876542222110 00123444445444333
Q ss_pred CCCCCcceeeEechhhhhcC----hh-hHHHHHHHHHHhcccC--cEEEEe
Q 024100 225 TPETGRYDVIWVQWCIGHLT----DD-DFVSFFKRAKENIARS--GTFLLS 268 (272)
Q Consensus 225 ~~~~~~fDlIvs~~vl~hl~----d~-~~~~~l~~~~r~Lkpg--G~liv~ 268 (272)
.+.++++|+|+|..+.. -. |. ....+|.-+.++|+|| |.|+++
T Consensus 151 ~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 151 NMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp GSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred hcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 34557899999877654 21 11 1124577778999999 988764
No 275
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.54 E-value=3e-08 Score=93.81 Aligned_cols=76 Identities=18% Similarity=0.147 Sum_probs=60.7
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CC-CCCcceee
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP-ETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~-~~~~fDlI 234 (272)
++.+|||+|||+|..+..+ ++.+.+|++||.|+.|++.|++++.... ....+++++++|+.++ +. .+++||+|
T Consensus 93 ~g~~VLDLgcG~G~~al~L-A~~g~~V~~VD~s~~~l~~Ar~N~~~~~----~gl~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIAL-MSKASQGIYIERNDETAVAARHNIPLLL----NEGKDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp TTCEEEESSCSSSHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHHS----CTTCEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCCEEEEeCCCchHHHHHH-HhcCCEEEEEECCHHHHHHHHHhHHHhc----cCCCcEEEEECcHHHhhhhccCCCceEE
Confidence 3679999999999999976 6888899999999999999999975310 0125799999999876 21 12489999
Q ss_pred Eec
Q 024100 235 WVQ 237 (272)
Q Consensus 235 vs~ 237 (272)
++.
T Consensus 168 ~lD 170 (410)
T 3ll7_A 168 YVD 170 (410)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 276
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.53 E-value=1.1e-06 Score=75.36 Aligned_cols=95 Identities=20% Similarity=0.113 Sum_probs=71.1
Q ss_pred CCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCC--CCceEEEEeCCCCC----------
Q 024100 158 HLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDM--HKATNFFCVPLQDF---------- 224 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~--~~~v~~~~~d~~~~---------- 224 (272)
..+|||+||| +.|.-+ ++. ..+|+.+|.++++.+.|++++... +. ..+++++.+|+.+.
T Consensus 31 a~~VLEiGtG--ySTl~l-A~~~~g~VvtvE~d~~~~~~ar~~l~~~-----g~~~~~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVA-AELPGKHVTSVESDRAWARMMKAWLAAN-----PPAEGTEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp CSEEEEESCS--HHHHHH-HTSTTCEEEEEESCHHHHHHHHHHHHHS-----CCCTTCEEEEEECCCSSBCGGGCBSSST
T ss_pred CCEEEEECch--HHHHHH-HHcCCCEEEEEeCCHHHHHHHHHHHHHc-----CCCCCCceEEEEeCchhhhcccccccch
Confidence 4599999985 677755 565 579999999999999999998653 12 45899999996542
Q ss_pred -----C--------C-CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 225 -----T--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 225 -----~--------~-~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+ . ..++||+|++..-. ....+..+.+.|+|||.|++
T Consensus 103 ~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 103 KWRSYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp TGGGTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEEEE
T ss_pred hhhhHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEEEE
Confidence 1 1 12689999987642 12566667799999998854
No 277
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.52 E-value=2.7e-07 Score=92.80 Aligned_cols=109 Identities=12% Similarity=0.082 Sum_probs=76.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc-------------------------------------------CCcEEEEeCCHH
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY-------------------------------------------FNEVDLLEPVSH 191 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~-------------------------------------------~~~v~~vD~S~~ 191 (272)
..+...+||.+||+|.+..+++... ...+.|+|.++.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 3456789999999999998764221 147999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC--CCcceeeEechhhh-hc-ChhhHHHHHHHHHHhc---ccCcE
Q 024100 192 FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--TGRYDVIWVQWCIG-HL-TDDDFVSFFKRAKENI---ARSGT 264 (272)
Q Consensus 192 mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fDlIvs~~vl~-hl-~d~~~~~~l~~~~r~L---kpgG~ 264 (272)
|++.|+.++..+ +....++|.++|+.++..+ .++||+|+++--++ -+ ..+++..+.+.+.+.| .|||.
T Consensus 268 av~~A~~N~~~a-----gv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 268 VIQRARTNARLA-----GIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHHT-----TCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHc-----CCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 999999998653 2234699999999887433 23899999994332 12 2345556666555544 57997
Q ss_pred EEEe
Q 024100 265 FLLS 268 (272)
Q Consensus 265 liv~ 268 (272)
+++.
T Consensus 343 ~~il 346 (703)
T 3v97_A 343 LSLF 346 (703)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 278
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.47 E-value=3.7e-07 Score=89.19 Aligned_cols=106 Identities=10% Similarity=-0.037 Sum_probs=76.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhc-------------------CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCC----
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY-------------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHK---- 212 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~-------------------~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~---- 212 (272)
.+..+|||.+||+|.+...++... ...+.|+|.++.++..|+.++... ...
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~------gi~~~~~ 241 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH------DIEGNLD 241 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT------TCCCBGG
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh------CCCcccc
Confidence 345699999999999988764221 137999999999999999876421 112
Q ss_pred -ceEEEEeCCCCCC-CCCCcceeeEechhhhhcCh------------hhHHHHHHHHHHhcccCcEEEE
Q 024100 213 -ATNFFCVPLQDFT-PETGRYDVIWVQWCIGHLTD------------DDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 213 -~v~~~~~d~~~~~-~~~~~fDlIvs~~vl~hl~d------------~~~~~~l~~~~r~LkpgG~liv 267 (272)
..++.++|....+ ...++||+|+++-.+....+ ..-..|+.++.+.|+|||++.+
T Consensus 242 ~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 242 HGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp GTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEE
Confidence 2788999876543 22358999999865544321 1123799999999999998754
No 279
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.45 E-value=8.5e-07 Score=83.13 Aligned_cols=103 Identities=16% Similarity=0.203 Sum_probs=69.0
Q ss_pred CCeeeEeecccchHHHHHHHh-------------c---CC--cEEEEeCC-----------HHHHHHHHHhccccCCCCC
Q 024100 158 HLVALDCGSGIGRITKNLLIR-------------Y---FN--EVDLLEPV-----------SHFLDAARESLAPENHMAP 208 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~-------------~---~~--~v~~vD~S-----------~~mld~A~~~l~~~~~~~~ 208 (272)
..+|+|+|||+|..|..++.. . .+ +|...|.- +.+.+..++...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------- 125 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------- 125 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC-------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc-------
Confidence 578999999999999977644 0 13 44556755 555555444321
Q ss_pred CCCCceEEEEeCCCCC---CCCCCcceeeEechhhhhcChh-------------------------------------hH
Q 024100 209 DMHKATNFFCVPLQDF---TPETGRYDVIWVQWCIGHLTDD-------------------------------------DF 248 (272)
Q Consensus 209 ~~~~~v~~~~~d~~~~---~~~~~~fDlIvs~~vl~hl~d~-------------------------------------~~ 248 (272)
......|+.+....| .++++++|+|+|+++||++.+. |+
T Consensus 126 -~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~ 204 (384)
T 2efj_A 126 -RKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDF 204 (384)
T ss_dssp -CCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHH
T ss_pred -CCCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHH
Confidence 111235666555443 4567899999999999998652 12
Q ss_pred HHHHHHHHHhcccCcEEEEe
Q 024100 249 VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 249 ~~~l~~~~r~LkpgG~liv~ 268 (272)
..||+..++.|+|||.+++.
T Consensus 205 ~~FL~~Ra~eL~pGG~mvl~ 224 (384)
T 2efj_A 205 TTFLRIHSEELISRGRMLLT 224 (384)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHhccCCeEEEE
Confidence 23477778999999998764
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.43 E-value=1e-07 Score=95.03 Aligned_cols=103 Identities=11% Similarity=0.073 Sum_probs=72.9
Q ss_pred CCeeeEeecccchHHHHHH-H-h-cC-----------CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC
Q 024100 158 HLVALDCGSGIGRITKNLL-I-R-YF-----------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD 223 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LL-a-~-~~-----------~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~ 223 (272)
...|||+|||+|-++...+ + + .. .+|.+||-|+..+...+.+... +-...|+++.+|+++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N------g~~d~VtVI~gd~ee 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR------TWKRRVTIIESDMRS 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH------TTTTCSEEEESCGGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc------CCCCeEEEEeCchhh
Confidence 4589999999999974321 1 1 11 2899999999766555544321 234579999999999
Q ss_pred CCCC-----CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEE
Q 024100 224 FTPE-----TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 224 ~~~~-----~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~li 266 (272)
+..+ +++.|+|||-+.=..+.++-..+.|..+.+.|+|||.+|
T Consensus 484 v~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 484 LPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 8762 468999998776322233434568888889999999875
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.35 E-value=4.6e-07 Score=84.65 Aligned_cols=113 Identities=11% Similarity=0.054 Sum_probs=78.3
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCC--CCCCCceEEEEeCCCCCC----CCCC
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMA--PDMHKATNFFCVPLQDFT----PETG 229 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~--~~~~~~v~~~~~d~~~~~----~~~~ 229 (272)
.++.+||=||.|.|...++++.....+|++||+++.+++.|++.+....... ....++++++..|...+- ...+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 3467999999999999999975445689999999999999999875321100 011245889999876542 1235
Q ss_pred cceeeEechh-------hhhcChhhH-HHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWC-------IGHLTDDDF-VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~v-------l~hl~d~~~-~~~l~~~~r~LkpgG~liv~ 268 (272)
+||+|+.-.. -.......+ .+|++.|+++|+|||.++..
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 8999996421 111112222 47999999999999998763
No 282
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.32 E-value=1.7e-06 Score=80.47 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=74.8
Q ss_pred CCCCeeeEeecccchHHHHHHHh---------------cCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE
Q 024100 156 NQHLVALDCGSGIGRITKNLLIR---------------YFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~---------------~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~ 218 (272)
+...+|+|+||++|..|..++.. ..+ +|...|......+..-+.+.... ......|..
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-----~~~~~~f~~ 124 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-----DVDGVCFIN 124 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-----SCTTCEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-----ccCCCEEEE
Confidence 34568999999999888855433 123 56677877777777766664321 001234555
Q ss_pred eCCCC---CCCCCCcceeeEechhhhhcCh-------------------------------hhHHHHHHHHHHhcccCcE
Q 024100 219 VPLQD---FTPETGRYDVIWVQWCIGHLTD-------------------------------DDFVSFFKRAKENIARSGT 264 (272)
Q Consensus 219 ~d~~~---~~~~~~~fDlIvs~~vl~hl~d-------------------------------~~~~~~l~~~~r~LkpgG~ 264 (272)
+.... -.++++++|+|+|+++||.+.+ .|+..||+..++.|+|||.
T Consensus 125 gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~ 204 (359)
T 1m6e_X 125 GVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGR 204 (359)
T ss_dssp EEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCE
T ss_pred ecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 44333 3456789999999999999865 1455679999999999999
Q ss_pred EEEe
Q 024100 265 FLLS 268 (272)
Q Consensus 265 liv~ 268 (272)
++..
T Consensus 205 mvl~ 208 (359)
T 1m6e_X 205 MVLT 208 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
No 283
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.18 E-value=4.4e-06 Score=75.35 Aligned_cols=104 Identities=12% Similarity=-0.033 Sum_probs=62.9
Q ss_pred CCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
+.+..+|||+||++|.++..++ +. ...|+++|+...+...... . .....++.....+...+.+.++++|
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~-~~~gv~sV~Gvdlg~~~~~~P~~-~-------~~~~~~iv~~~~~~di~~l~~~~~D 149 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAA-AQKEVMSVKGYTLGIEGHEKPIH-M-------QTLGWNIVKFKDKSNVFTMPTEPSD 149 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHH-TSTTEEEEEEECCCCTTSCCCCC-C-------CBTTGGGEEEECSCCTTTSCCCCCS
T ss_pred CCCCCEEEEcCCCCCHHHHHHH-HhcCCceeeeEEecccccccccc-c-------cccCCceEEeecCceeeecCCCCcC
Confidence 4577899999999999999775 43 3367888876543111000 0 0012233334444433344456899
Q ss_pred eeEechhhhhcC----hh-hHHHHHHHHHHhcccC-cEEEEe
Q 024100 233 VIWVQWCIGHLT----DD-DFVSFFKRAKENIARS-GTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~----d~-~~~~~l~~~~r~Lkpg-G~liv~ 268 (272)
+|+|..+-. -. |. ....+|.-+.++|+|| |.|+++
T Consensus 150 lVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 150 TLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp EEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred EEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 999865543 11 11 1124577778999999 998864
No 284
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.17 E-value=1.5e-06 Score=77.09 Aligned_cols=109 Identities=13% Similarity=0.140 Sum_probs=68.4
Q ss_pred CCCeeeEeecccchHHHHHHHhc------CC-------cEEEEeCCH---HHHH-----------HHHHhccccCC----
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY------FN-------EVDLLEPVS---HFLD-----------AARESLAPENH---- 205 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~------~~-------~v~~vD~S~---~mld-----------~A~~~l~~~~~---- 205 (272)
+..+|||+|+|+|..+..++... .+ +++.+|..+ +++. .|++.+.....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 45699999999999998764321 33 678889654 5555 44544321000
Q ss_pred ----CCCCCCCceEEEEeCCCCC-CCCC----CcceeeEec-hhhhhcChhh--HHHHHHHHHHhcccCcEEEE
Q 024100 206 ----MAPDMHKATNFFCVPLQDF-TPET----GRYDVIWVQ-WCIGHLTDDD--FVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 206 ----~~~~~~~~v~~~~~d~~~~-~~~~----~~fDlIvs~-~vl~hl~d~~--~~~~l~~~~r~LkpgG~liv 267 (272)
.-.....+++++.+|+.+. +..+ ..||+|+.- ++-.. +++ -..+|+.+.+.|+|||.++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~--~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK--NPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT--CGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc--ChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0001224788999998763 2211 279999984 33211 222 23799999999999999874
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.13 E-value=7.1e-06 Score=83.15 Aligned_cols=108 Identities=14% Similarity=0.085 Sum_probs=70.1
Q ss_pred CCCeeeEeecccchHHHHHHHhcC-----CcEEEEeCCHHHHHHH--HHhccccCCCCCCCCCceEEEEeCCCCCCC-CC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF-----NEVDLLEPVSHFLDAA--RESLAPENHMAPDMHKATNFFCVPLQDFTP-ET 228 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~-----~~v~~vD~S~~mld~A--~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 228 (272)
++.+|||.|||+|.+...++ +.. .++.|+|+++.+++.| +.++..... ........+...|+..... ..
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA-~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~L--lhGi~~~~I~~dD~L~~~~~~~ 397 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVS-AGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQL--VSSNNAPTITGEDVCSLNPEDF 397 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHH-HTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTT--CBTTBCCEEECCCGGGCCGGGG
T ss_pred CCCEEEECCCCccHHHHHHH-HHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhh--hcCCCcceEEecchhccccccc
Confidence 46799999999999999774 544 3789999999999999 444321000 0111223555666654321 23
Q ss_pred CcceeeEechhhhh-cC-hh-------------------------hHHHHHHHHHHhcccCcEEEE
Q 024100 229 GRYDVIWVQWCIGH-LT-DD-------------------------DFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 229 ~~fDlIvs~~vl~h-l~-d~-------------------------~~~~~l~~~~r~LkpgG~liv 267 (272)
++||+|+++--+.. .. +. -...|+..+.+.|+|||.+.+
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISA 463 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEE
Confidence 58999998744311 00 00 123588999999999998754
No 286
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.13 E-value=1e-05 Score=78.93 Aligned_cols=105 Identities=14% Similarity=0.051 Sum_probs=74.6
Q ss_pred CCCeeeEeecccchHHHHHHHhc----CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC--C-CCCC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY----FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--T-PETG 229 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~----~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~--~-~~~~ 229 (272)
+..+|+|.+||+|.+...++... ...+.|+|.++.++..|+.++.... ....++.+.++|.... + ....
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g----i~~~~~~I~~gDtL~~d~p~~~~~ 296 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG----VPIENQFLHNADTLDEDWPTQEPT 296 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT----CCGGGEEEEESCTTTSCSCCSSCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC----CCcCccceEecceecccccccccc
Confidence 56699999999999988775331 3579999999999999998763321 0114678999997654 2 2346
Q ss_pred cceeeEechhhhh-------------------cC---hhhHHHHHHHHHHhcc-cCcEEE
Q 024100 230 RYDVIWVQWCIGH-------------------LT---DDDFVSFFKRAKENIA-RSGTFL 266 (272)
Q Consensus 230 ~fDlIvs~~vl~h-------------------l~---d~~~~~~l~~~~r~Lk-pgG~li 266 (272)
+||+|+++--+.. ++ +.+ -.|+..+.+.|+ |||++.
T Consensus 297 ~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 297 NFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp CBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEE
T ss_pred cccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEE
Confidence 8999998632210 10 111 258999999999 999874
No 287
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.12 E-value=7.9e-06 Score=76.09 Aligned_cols=72 Identities=13% Similarity=0.040 Sum_probs=57.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+.++.+|||+||++|.+|..+ .+.+..|++||+.+ |-.... ..++|+++.+|...+.++.++||+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l-~~rg~~V~aVD~~~-l~~~l~------------~~~~V~~~~~d~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQL-VKRNMWVYSVDNGP-MAQSLM------------DTGQVTWLREDGFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHH-HHTTCEEEEECSSC-CCHHHH------------TTTCEEEECSCTTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHH-HHCCCEEEEEEhhh-cChhhc------------cCCCeEEEeCccccccCCCCCcCEE
Confidence 457889999999999999977 57788999999764 322221 2468999999999988776789999
Q ss_pred Eechhh
Q 024100 235 WVQWCI 240 (272)
Q Consensus 235 vs~~vl 240 (272)
+|-.+.
T Consensus 275 vsDm~~ 280 (375)
T 4auk_A 275 VCDMVE 280 (375)
T ss_dssp EECCSS
T ss_pred EEcCCC
Confidence 998875
No 288
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.02 E-value=1.1e-05 Score=71.46 Aligned_cols=115 Identities=12% Similarity=0.027 Sum_probs=64.1
Q ss_pred HHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE
Q 024100 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF 217 (272)
Q Consensus 140 ~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~ 217 (272)
.-|.++-.+.+ +.+..+|||+||++|.++... ++. ...|.+..+.... ...+... ......-+.|.
T Consensus 60 yKL~EIdeK~l----ikpg~~VVDLGaAPGGWSQvA-a~~~~vg~V~G~vig~D~-----~~~P~~~--~~~Gv~~i~~~ 127 (269)
T 2px2_A 60 AKLRWLVERRF----VQPIGKVVDLGCGRGGWSYYA-ATMKNVQEVRGYTKGGPG-----HEEPMLM--QSYGWNIVTMK 127 (269)
T ss_dssp HHHHHHHHTTS----CCCCEEEEEETCTTSHHHHHH-TTSTTEEEEEEECCCSTT-----SCCCCCC--CSTTGGGEEEE
T ss_pred HHHHHHHHcCC----CCCCCEEEEcCCCCCHHHHHH-hhhcCCCCceeEEEcccc-----ccCCCcc--cCCCceEEEee
Confidence 33555555433 678899999999999999966 454 3344555433221 0111000 00011223555
Q ss_pred Ee-CCCCCCCCCCcceeeEechhh---hhcChhh-HHHHHHHHHHhcccCc-EEEEe
Q 024100 218 CV-PLQDFTPETGRYDVIWVQWCI---GHLTDDD-FVSFFKRAKENIARSG-TFLLS 268 (272)
Q Consensus 218 ~~-d~~~~~~~~~~fDlIvs~~vl---~hl~d~~-~~~~l~~~~r~LkpgG-~liv~ 268 (272)
++ |+.++. +.++|+|+|-.+= +...|.. -..+|.-+.++|+||| .|+++
T Consensus 128 ~G~Df~~~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 128 SGVDVFYKP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp CSCCGGGSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ccCCccCCC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 46 887653 3579999975421 1111111 1136777779999999 77653
No 289
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.02 E-value=6.1e-06 Score=80.64 Aligned_cols=105 Identities=10% Similarity=-0.100 Sum_probs=70.8
Q ss_pred CCeeeEeecccchHHHHHHHhc----------------CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCC
Q 024100 158 HLVALDCGSGIGRITKNLLIRY----------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~----------------~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~ 221 (272)
..+|||.+||+|.+...++... ...+.|+|+++.++..|+.++... +...++.+.++|.
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~-----gi~~~i~i~~gDt 319 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR-----GIDFNFGKKNADS 319 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT-----TCCCBCCSSSCCT
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh-----CCCcccceeccch
Confidence 3499999999999888663211 247899999999999999876432 1122344477776
Q ss_pred CCCC-CCCCcceeeEechhhhh-------------------------cCh--hhHHHHHHHHHHhcccCcEEEE
Q 024100 222 QDFT-PETGRYDVIWVQWCIGH-------------------------LTD--DDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 222 ~~~~-~~~~~fDlIvs~~vl~h-------------------------l~d--~~~~~~l~~~~r~LkpgG~liv 267 (272)
...+ ....+||+|+++-.+.. ++. ..--.|+..+.+.|+|||++.+
T Consensus 320 L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 320 FLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMAL 393 (544)
T ss_dssp TTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEE
T ss_pred hcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEE
Confidence 5443 23468999998744332 111 0112699999999999998643
No 290
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.99 E-value=4.1e-05 Score=69.06 Aligned_cols=181 Identities=14% Similarity=0.118 Sum_probs=89.7
Q ss_pred CCceeecccCCCCcccCCHHHHHHHHhcccccchhhhhHHH--HHHHhhhhc-chhhhhccccCCCCCcchhhhhHHHHH
Q 024100 66 SSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWY--REGISYWEG-VEASVDGVLGGFGNVNEVDIKGSEAFL 142 (272)
Q Consensus 66 ~~~~~~~g~~~~G~~~~~~~e~W~~~~~~~~~~~~~~~~~y--~~~~~YW~~-~~~~~~~~lggy~~~s~~d~~~s~~~L 142 (272)
++.+.-+|+..-|-.-.+.-+.||+.++. -.+.+|+ .. ..-++- +....+.+-.|-... ..-...+..-|
T Consensus 11 ~~~~~~~~~~rg~~~g~tlG~~wK~~LN~-----l~k~~F~~Yk~-~gi~Evdr~~ar~~l~~g~~~~-g~y~SR~~~KL 83 (321)
T 3lkz_A 11 SSGLVPRGSHMGGAKGRTLGEVWKERLNQ-----MTKEEFTRYRK-EAIIEVDRSAAKHARKEGNVTG-GHPVSRGTAKL 83 (321)
T ss_dssp ---------------CCSHHHHHHHHHTT-----SCHHHHHHHTT-TTCEEECCHHHHHHHHHTCCSS-CCCSSTHHHHH
T ss_pred ccCcccccCcCCCCCCCchHHHHHHHHhc-----cCHHHHHHHhh-cCceeechHHHHHHHhcCcCcC-CCccchHHHHH
Confidence 33444566666666778899999999886 2223332 21 111111 111111111111100 11122233345
Q ss_pred HHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEe-C
Q 024100 143 QMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-P 220 (272)
Q Consensus 143 ~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~-d 220 (272)
..+..+.+ +.+..+|||+||++|.++...+...+ ..|.++|.-...-+. .... .+-.-..+.|++. |
T Consensus 84 ~ei~~~~~----l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~------~ql~w~lV~~~~~~D 152 (321)
T 3lkz_A 84 RWLVERRF----LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLV------QSYGWNIVTMKSGVD 152 (321)
T ss_dssp HHHHHTTS----CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCC------CBTTGGGEEEECSCC
T ss_pred HHHHHhcC----CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchh------hhcCCcceEEEeccC
Confidence 56655432 56788999999999999996643443 368999855431100 0000 0112245888887 8
Q ss_pred CCCCCCCCCcceeeEechhhhhcChhhH-----HHHHHHHHHhcccC-cEEEE
Q 024100 221 LQDFTPETGRYDVIWVQWCIGHLTDDDF-----VSFFKRAKENIARS-GTFLL 267 (272)
Q Consensus 221 ~~~~~~~~~~fDlIvs~~vl~hl~d~~~-----~~~l~~~~r~Lkpg-G~liv 267 (272)
+..+++ .++|+|+|--. .--+++.. ..+|.-+.++|++| |-|++
T Consensus 153 v~~l~~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 153 VFYRPS--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp TTSSCC--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HhhCCC--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 877765 57999998655 33233222 23666667889888 76665
No 291
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.99 E-value=9.1e-06 Score=73.03 Aligned_cols=81 Identities=19% Similarity=0.090 Sum_probs=62.5
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----CCC
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----ETG 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~ 229 (272)
+.+++.+||++||.|..|..++.+ ...|+++|.++.+++.|++ +. . .+++++++++.+++. ..+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~--------~-~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LH--------L-PGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TC--------C-TTEEEEESCGGGHHHHHHHTTCS
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hc--------c-CCEEEEECCcchHHHHHHHcCCC
Confidence 456779999999999999998754 6799999999999999998 73 1 589999999987631 124
Q ss_pred cceeeEe--chhhhhcChh
Q 024100 230 RYDVIWV--QWCIGHLTDD 246 (272)
Q Consensus 230 ~fDlIvs--~~vl~hl~d~ 246 (272)
++|.|++ ..+.+++.++
T Consensus 89 ~vDgIL~DLGvSS~Qld~~ 107 (285)
T 1wg8_A 89 RVDGILADLGVSSFHLDDP 107 (285)
T ss_dssp CEEEEEEECSCCHHHHHCG
T ss_pred CcCEEEeCCcccccccccc
Confidence 7999995 3344444433
No 292
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.91 E-value=5.8e-06 Score=67.43 Aligned_cols=77 Identities=9% Similarity=-0.000 Sum_probs=54.7
Q ss_pred CCCCeeeEeecccc-hHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-Cccee
Q 024100 156 NQHLVALDCGSGIG-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (272)
Q Consensus 156 ~~~~~VLDiGcGtG-~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fDl 233 (272)
..+.+|||+|||.| +++..|..+.+.+|+++|+++..++ |++.|+.+..+.. ..||+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------------~v~dDiF~P~~~~Y~~~DL 92 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------------IVRDDITSPRMEIYRGAAL 92 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------------EECCCSSSCCHHHHTTEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------------eEEccCCCCcccccCCcCE
Confidence 35679999999999 7999774337889999998875433 6677776643321 37999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHh
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKEN 258 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~ 258 (272)
|++... .+|+...+-++.+.
T Consensus 93 IYsirP-----P~El~~~i~~lA~~ 112 (153)
T 2k4m_A 93 IYSIRP-----PAEIHSSLMRVADA 112 (153)
T ss_dssp EEEESC-----CTTTHHHHHHHHHH
T ss_pred EEEcCC-----CHHHHHHHHHHHHH
Confidence 987665 35666666666644
No 293
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.80 E-value=6e-05 Score=69.95 Aligned_cols=111 Identities=11% Similarity=-0.012 Sum_probs=76.7
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CCCCcc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~f 231 (272)
..++.+|||+.||+|.=|..++ .... .++++|.|+.-+...++++.+..........++.+.+.|...+. ...+.|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la-~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALL-QTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHH-HTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCEEEEecCCccHHHHHHH-HhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 4677899999999999999885 5544 68999999998888888775432211112357888888877653 234689
Q ss_pred eeeE----echh----hh-------hcChhh-------HHHHHHHHHHhcccCcEEE
Q 024100 232 DVIW----VQWC----IG-------HLTDDD-------FVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 232 DlIv----s~~v----l~-------hl~d~~-------~~~~l~~~~r~LkpgG~li 266 (272)
|.|+ |+.. +. ..+..+ ..++|.+..+.|||||.+|
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LV 281 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVV 281 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 9999 3431 11 111111 1367888889999999876
No 294
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.76 E-value=7.5e-05 Score=67.11 Aligned_cols=105 Identities=9% Similarity=0.028 Sum_probs=73.2
Q ss_pred CCCCeeeEeecccchHHHHHHHhc-------CCcEEEEeCCHH--------------------------HHHHHHHhccc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY-------FNEVDLLEPVSH--------------------------FLDAARESLAP 202 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~-------~~~v~~vD~S~~--------------------------mld~A~~~l~~ 202 (272)
..+++|||||+.+|..+..+ +.. ..+++++|..+. .++.+++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~m-a~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILM-RGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHH-HHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred CCCCcEEEeecCchHHHHHH-HHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 34679999999999999866 332 457899985421 46778888765
Q ss_pred cCCCCCCCCCceEEEEeCCCCC-C-CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 203 ENHMAPDMHKATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 203 ~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
... ...+++++.+++.+. + .+.++||+|++-.-. + .....+|..+...|+|||+|++-+
T Consensus 184 ~gl----~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y---~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 184 YDL----LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-Y---ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp TTC----CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-H---HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred cCC----CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-c---ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 311 136899999998653 2 223589999976532 2 123478999999999999887643
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.69 E-value=0.00023 Score=62.36 Aligned_cols=114 Identities=13% Similarity=0.042 Sum_probs=69.2
Q ss_pred HHHHHHHHhccCCCccCCCCCeeeEeecccchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE
Q 024100 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF 217 (272)
Q Consensus 139 ~~~L~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~ 217 (272)
..-|..+..+.+ +.+..+|||+||++|.++...+.+.+ ..|.++|.-...- +. .....+-.-..++|.
T Consensus 64 ~~KL~ei~ek~~----l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh----e~---P~~~~s~gwn~v~fk 132 (267)
T 3p8z_A 64 SAKLQWFVERNM----VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH----EE---PVPMSTYGWNIVKLM 132 (267)
T ss_dssp HHHHHHHHHTTS----SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS----CC---CCCCCCTTTTSEEEE
T ss_pred HHHHHHHHHhcC----CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc----cC---cchhhhcCcCceEEE
Confidence 334555655442 56788999999999999997754443 3689998554321 10 000011234679999
Q ss_pred Ee-CCCCCCCCCCcceeeEechhhhhcChh--hH---HHHHHHHHHhcccCcEEEE
Q 024100 218 CV-PLQDFTPETGRYDVIWVQWCIGHLTDD--DF---VSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 218 ~~-d~~~~~~~~~~fDlIvs~~vl~hl~d~--~~---~~~l~~~~r~LkpgG~liv 267 (272)
++ |+...++ .++|+|+|-..= --+++ |- ..+|.-+.++|++ |.+++
T Consensus 133 ~gvDv~~~~~--~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 133 SGKDVFYLPP--EKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CSCCGGGCCC--CCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred eccceeecCC--ccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 98 8866654 579999985431 11111 11 2356666788988 55544
No 296
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.69 E-value=6.7e-06 Score=92.63 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=54.8
Q ss_pred CCCeeeEeecccchHHHHHHHhc------CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETG 229 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~------~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 229 (272)
+..+||+||+|+|..+..++... +.+.+.+|+|+.+.+.|++++... .+..-..|.++. .+..+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---------di~~~~~d~~~~~~~~~~ 1310 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---------HVTQGQWDPANPAPGSLG 1310 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------TEEEECCCSSCCCC----
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------ccccccccccccccCCCC
Confidence 46799999999998887765432 347889999999988888876321 222221233222 11345
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.||+|++++++|-..+.. ..|+++++.|+|||+++..|
T Consensus 1311 ~ydlvia~~vl~~t~~~~--~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPA--VAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp -CCEEEEECC----------------------CCEEEEEE
T ss_pred ceeEEEEcccccccccHH--HHHHHHHHhcCCCcEEEEEe
Confidence 799999999995444444 89999999999999998765
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.34 E-value=0.00021 Score=64.05 Aligned_cols=46 Identities=24% Similarity=0.148 Sum_probs=41.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~ 202 (272)
.++..|||++||+|.++..+ ++.+.+++++|.++.+++.|++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a-~~~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAA-ARWGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHH-HHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 35679999999999999977 58889999999999999999998754
No 298
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.05 E-value=0.0029 Score=57.87 Aligned_cols=112 Identities=9% Similarity=0.127 Sum_probs=79.3
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCC-HHHHHHHHHhccccCCC----------CC-----CCCCceEEEEeC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPV-SHFLDAARESLAPENHM----------AP-----DMHKATNFFCVP 220 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S-~~mld~A~~~l~~~~~~----------~~-----~~~~~v~~~~~d 220 (272)
+...|+.+|||.......|. ..++.+..+|++ |.+++.-++.+...... .. -...+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~-~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLL-QMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHH-HHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhc-CcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 34689999999999999885 444567776644 77777776665432000 00 012578899999
Q ss_pred CCCCC--------C-CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 221 LQDFT--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 221 ~~~~~--------~-~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
+.+.. . ..+...++++-.++.|++.++..++|+.+.+.. |+|.+++.|.
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 97631 1 224678899999999999999899999999887 7887766654
No 299
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.92 E-value=0.0053 Score=59.59 Aligned_cols=106 Identities=14% Similarity=0.029 Sum_probs=68.6
Q ss_pred CCCCeeeEeecccchHHHHHHHh---c-----------CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCC
Q 024100 156 NQHLVALDCGSGIGRITKNLLIR---Y-----------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~---~-----------~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~ 221 (272)
.++.+|+|-.||+|.+....... . ...+.|+|.++.+...|+-++-.. .....++.++|.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh------g~~~~~I~~~dt 289 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH------GLEYPRIDPENS 289 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH------TCSCCEEECSCT
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc------CCcccccccccc
Confidence 45569999999999998765321 1 236899999999999998765321 122345677776
Q ss_pred CCCCC----CCCcceeeEechhhhh---------c----C-hhhHHHHHHHHHHhcc-------cCcEEEE
Q 024100 222 QDFTP----ETGRYDVIWVQWCIGH---------L----T-DDDFVSFFKRAKENIA-------RSGTFLL 267 (272)
Q Consensus 222 ~~~~~----~~~~fDlIvs~~vl~h---------l----~-d~~~~~~l~~~~r~Lk-------pgG~liv 267 (272)
...+. ...+||+|+++--+.- + + ...-..|+..+.+.|+ |||++.+
T Consensus 290 L~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~av 360 (530)
T 3ufb_A 290 LRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAV 360 (530)
T ss_dssp TCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEE
T ss_pred ccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEE
Confidence 54432 1247999998754421 1 0 1112257888888887 6897643
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.79 E-value=0.0022 Score=59.30 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=49.0
Q ss_pred CCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC
Q 024100 158 HLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~ 225 (272)
...|||||.|+|.+|..|+... ..+|++||+++.++...++.+. ..+++++.+|+.+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~---------~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE---------GSPLQILKRDPYDWS 118 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT---------TSSCEEECSCTTCHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc---------CCCEEEEECCccchh
Confidence 4789999999999999997442 5689999999999999988751 357899999996653
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.47 E-value=0.032 Score=50.40 Aligned_cols=103 Identities=11% Similarity=-0.030 Sum_probs=73.2
Q ss_pred eeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC---------CCCc
Q 024100 160 VALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---------ETGR 230 (272)
Q Consensus 160 ~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~---------~~~~ 230 (272)
-|+++|||-=.....+.......|.=|| -|..++..++.+..... ....+..++.+|+.+ .. ....
T Consensus 105 QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~---~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 105 QFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGV---TPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp EEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTC---CCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred eEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCC---CCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 5999999977666655211223566667 58899988888853210 124578899999875 21 1123
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
.=++++..+++|+++++...+++.+...+.||++++.
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~ 216 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAV 216 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4567788999999998888999999999999987764
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.39 E-value=0.0067 Score=53.07 Aligned_cols=45 Identities=18% Similarity=0.143 Sum_probs=40.6
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhcc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLA 201 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~ 201 (272)
.++..|||..||+|.++... .+.+.+++++|.++.+++.|++++.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a-~~~gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVA-KKLGRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHH-HHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 46779999999999999976 5888999999999999999999874
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.33 E-value=0.0055 Score=55.34 Aligned_cols=92 Identities=12% Similarity=0.178 Sum_probs=58.9
Q ss_pred CCCCCeeeEeec------ccchHHHHHHHhcCC---cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC
Q 024100 155 NNQHLVALDCGS------GIGRITKNLLIRYFN---EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (272)
Q Consensus 155 ~~~~~~VLDiGc------GtG~~t~~LLa~~~~---~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~ 225 (272)
.+.+.+|||+|| -+|.. ++++..+ .|+.+|+.+-- .... .++++|.....
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~---VLr~~~p~g~~VVavDL~~~~-----------------sda~-~~IqGD~~~~~ 165 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA---VLRQWLPTGTLLVDSDLNDFV-----------------SDAD-STLIGDCATVH 165 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH---HHHHHSCTTCEEEEEESSCCB-----------------CSSS-EEEESCGGGEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH---HHHHhCCCCcEEEEeeCcccc-----------------cCCC-eEEEccccccc
Confidence 567889999996 67774 3234333 67888865410 0112 45899976654
Q ss_pred CCCCcceeeEech---hhhhcChhh------HHHHHHHHHHhcccCcEEEEe
Q 024100 226 PETGRYDVIWVQW---CIGHLTDDD------FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~---vl~hl~d~~------~~~~l~~~~r~LkpgG~liv~ 268 (272)
.. ++||+|+|-. .-.+...+. .+.++.=+.+.|+|||.|+++
T Consensus 166 ~~-~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 166 TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp ES-SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cC-CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 43 6899999743 223322222 346777778899999999875
No 304
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.31 E-value=0.0039 Score=55.86 Aligned_cols=99 Identities=11% Similarity=0.027 Sum_probs=73.8
Q ss_pred CCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC----CCCCCCccee
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD----FTPETGRYDV 233 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fDl 233 (272)
+..+||+=+|+|.++.++++ .+.+++.+|.++..++.-++++.. ..++.++..|... +.++..+||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~--------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF--------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT--------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred CCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc--------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 34699999999999999974 668999999999999999988742 3578999998533 2233357999
Q ss_pred eEechhhhhcChhhHHHHHHHHHH--hcccCcEEEE
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKE--NIARSGTFLL 267 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r--~LkpgG~liv 267 (272)
|++-=..+. ..+..++++.+.+ .+.|+|.+++
T Consensus 163 VfiDPPYe~--k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 163 IFIDPSYER--KEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp EEECCCCCS--TTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEECCCCCC--CcHHHHHHHHHHHhCccCCCeEEEE
Confidence 999766532 1234466766665 4568898765
No 305
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.94 E-value=0.0097 Score=54.64 Aligned_cols=73 Identities=14% Similarity=0.185 Sum_probs=55.3
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC---C--
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---E-- 227 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~---~-- 227 (272)
+.+++.++|+.||.|..|..+|...+ ..|+++|.++.+++.|+ ++. ..+++++.+++.++.. .
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---------~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---------DPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---------CTTEEEEESCGGGHHHHHHHTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---------CCcEEEEeCCHHHHHHHHHhcC
Confidence 45778999999999999998875543 47999999999999994 551 3578899988876521 1
Q ss_pred -CCcceeeEec
Q 024100 228 -TGRYDVIWVQ 237 (272)
Q Consensus 228 -~~~fDlIvs~ 237 (272)
.+++|.|+..
T Consensus 125 ~~~~vDgILfD 135 (347)
T 3tka_A 125 LIGKIDGILLD 135 (347)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCcccEEEEC
Confidence 1258888853
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.91 E-value=0.0076 Score=55.15 Aligned_cols=70 Identities=17% Similarity=0.183 Sum_probs=53.0
Q ss_pred CeeeEeecccchHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC---Cccee
Q 024100 159 LVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---GRYDV 233 (272)
Q Consensus 159 ~~VLDiGcGtG~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~fDl 233 (272)
.+|+|+-||+|.++..+.... +..|.++|.++..++..+.++. ...++++|+.++.... ..+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----------~~~~~~~Di~~~~~~~~~~~~~D~ 71 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----------HTQLLAKTIEGITLEEFDRLSFDM 71 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----------TSCEECSCGGGCCHHHHHHHCCSE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----------ccccccCCHHHccHhHcCcCCcCE
Confidence 489999999999999885333 3478999999999999999873 2347788888775311 15899
Q ss_pred eEechh
Q 024100 234 IWVQWC 239 (272)
Q Consensus 234 Ivs~~v 239 (272)
|+...-
T Consensus 72 l~~gpP 77 (343)
T 1g55_A 72 ILMSPP 77 (343)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 996543
No 307
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.85 E-value=0.033 Score=51.64 Aligned_cols=68 Identities=15% Similarity=0.062 Sum_probs=52.7
Q ss_pred CeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC--------CCCc
Q 024100 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--------ETGR 230 (272)
Q Consensus 159 ~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~~ 230 (272)
.+++|+-||.|.++..+....+..|.++|.++..++..+.++. +..++++|+.++.. ....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~-----------~~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP-----------RSLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT-----------TSEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC-----------CCceEecChhhcCHHHHHhhcccCCC
Confidence 3799999999999998854445566799999999999988763 45677888877642 2357
Q ss_pred ceeeEec
Q 024100 231 YDVIWVQ 237 (272)
Q Consensus 231 fDlIvs~ 237 (272)
+|+|+..
T Consensus 72 ~D~i~gg 78 (376)
T 3g7u_A 72 IDGIIGG 78 (376)
T ss_dssp CCEEEEC
T ss_pred eeEEEec
Confidence 9999953
No 308
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.56 E-value=0.038 Score=50.99 Aligned_cols=98 Identities=9% Similarity=-0.088 Sum_probs=64.1
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-C-----C
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-----P 226 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~-----~ 226 (272)
+.++.+||-+|||. |..+..++...+. +|+++|.|++.++.+++ +. . +.+...-.++ . .
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG---------a---~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD-AG---------F---ETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT-TT---------C---EEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cC---------C---cEEcCCCcchHHHHHHHH
Confidence 56778999999986 8888888655566 89999999998888864 21 1 2222221221 0 0
Q ss_pred -CCCcceeeEechhhh---------hcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 -ETGRYDVIWVQWCIG---------HLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 -~~~~fDlIvs~~vl~---------hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....||+|+-.-.-. |+. +. ..+..+.+.|++||.++..
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTET-PN--GALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBC-TT--HHHHHHHHHEEEEEEEECC
T ss_pred hCCCCCCEEEECCCCccccccccccccc-cH--HHHHHHHHHHhcCCEEEEe
Confidence 112699998543321 111 12 4788889999999998753
No 309
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.98 E-value=0.09 Score=47.83 Aligned_cols=94 Identities=12% Similarity=0.015 Sum_probs=62.6
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-----CCC
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TPE 227 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-----~~~ 227 (272)
+.++.+||-+|||. |..+..++...+. .|+++|.+++-++.+++.= .. .++...-+++ ...
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lG----------a~--~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG----------AT--HVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT----------CS--EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC----------CC--EEecCCccCHHHHHHHhc
Confidence 56778999999985 8888878654566 6999999999999887541 11 1222111111 011
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++.+|+|+-.-.- . ..+..+.+.|+++|.++..
T Consensus 256 ~gg~D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 256 DGGVNFALESTGS------P--EILKQGVDALGILGKIAVV 288 (371)
T ss_dssp TSCEEEEEECSCC------H--HHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcEEEECCCC------H--HHHHHHHHHHhcCCEEEEe
Confidence 2369998854331 2 4678889999999998764
No 310
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.39 E-value=0.051 Score=50.77 Aligned_cols=48 Identities=23% Similarity=0.269 Sum_probs=39.8
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcC---CcEEEEeCCHHHHHHHHHhccc
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAP 202 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~---~~v~~vD~S~~mld~A~~~l~~ 202 (272)
+.++..++||||++|.++..++++.+ .+|.++||++...+..++++..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 35778999999999999997752433 5899999999999999988753
No 311
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.22 E-value=0.16 Score=41.56 Aligned_cols=91 Identities=11% Similarity=0.029 Sum_probs=61.0
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-------
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------- 225 (272)
+.++.+||..|+ |.|..+..++...+.+|.+++.+++.++.+++ +. .. ..+ |..+..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g---------~~--~~~--d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LG---------VE--YVG--DSRSVDFADEILE 101 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-TC---------CS--EEE--ETTCSTHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC---------CC--EEe--eCCcHHHHHHHHH
Confidence 456789999994 67888887766678899999999988877754 21 11 111 221111
Q ss_pred -CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 -~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...+.+|+|+.+-. . ..+..+.+.|+|||.++..
T Consensus 102 ~~~~~~~D~vi~~~g------~---~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 102 LTDGYGVDVVLNSLA------G---EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp HTTTCCEEEEEECCC------T---HHHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCCeEEEECCc------h---HHHHHHHHHhccCCEEEEE
Confidence 11236999986532 1 4678888999999998764
No 312
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.21 E-value=0.3 Score=44.74 Aligned_cols=98 Identities=10% Similarity=-0.018 Sum_probs=64.0
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC-CC------
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT------ 225 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~-~~------ 225 (272)
+.++.+||-+|||. |..+..++...+. .|+++|.+++-++.+++. . . +.+...-++ +.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-G---------a---~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-G---------F---EIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-T---------C---EEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-C---------C---cEEccCCcchHHHHHHHH
Confidence 56778999999875 8888888644565 699999999999988653 1 1 222211111 10
Q ss_pred CCCCcceeeEechh----------hhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 PETGRYDVIWVQWC----------IGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~v----------l~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.....+|+|+-.-. .|| .++. ..+..+.+.|++||.++..
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKH-EAPA--TVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGS-BCTT--HHHHHHHHHEEEEEEEEEC
T ss_pred hCCCCCCEEEECCCCcccccccccccc-cchH--HHHHHHHHHHhcCCEEEEe
Confidence 01136999985432 222 2333 5788999999999998753
No 313
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.20 E-value=0.057 Score=49.11 Aligned_cols=101 Identities=8% Similarity=0.003 Sum_probs=65.6
Q ss_pred CCCeeeEeecccchHHHHHHHhcC---CcE-EEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC---C
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF---NEV-DLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---G 229 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~---~~v-~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~ 229 (272)
...+++|+-||.|.++..+ .+.+ .-| .++|.++..++..+.++.. . +++.|+.++.... .
T Consensus 9 ~~~~vidLFaG~GG~~~G~-~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~----------~--~~~~DI~~~~~~~i~~~ 75 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSY-ERSSININATFIPFDINEIANKIYSKNFKE----------E--VQVKNLDSISIKQIESL 75 (327)
T ss_dssp CCEEEEEETCTTTHHHHHH-HHSSCCCCEEEEEECCCHHHHHHHHHHHCC----------C--CBCCCTTTCCHHHHHHT
T ss_pred CCCEEEEECCChhHHHHHH-HHcCCCceEEEEEEECCHHHHHHHHHHCCC----------C--cccCChhhcCHHHhccC
Confidence 3558999999999999988 4554 455 6999999999999988732 1 5677888775321 2
Q ss_pred cceeeEechhhhhc----------ChhhHHHHHHHHHH-hccc---CcEEEEecC
Q 024100 230 RYDVIWVQWCIGHL----------TDDDFVSFFKRAKE-NIAR---SGTFLLSHS 270 (272)
Q Consensus 230 ~fDlIvs~~vl~hl----------~d~~~~~~l~~~~r-~Lkp---gG~liv~E~ 270 (272)
.+|+++.+.-...+ .++....++.++.+ .++. .-.+++.|+
T Consensus 76 ~~Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lEN 130 (327)
T 3qv2_A 76 NCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIEN 130 (327)
T ss_dssp CCCEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEE
T ss_pred CCCEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEc
Confidence 58999954322222 11222356666666 5542 234555554
No 314
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.18 E-value=0.065 Score=48.68 Aligned_cols=67 Identities=13% Similarity=-0.018 Sum_probs=49.7
Q ss_pred CCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-CcceeeEe
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDVIWV 236 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fDlIvs 236 (272)
..+++|+.||+|.++..+....+..|.++|.++..++..+.++... . ++|+.++.... ..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~----------~---~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK----------P---EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC----------C---BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC----------C---cCCHHHcCHhhCCCCCEEEE
Confidence 3589999999999999885444566788999999999999987421 1 56776654321 25899995
Q ss_pred c
Q 024100 237 Q 237 (272)
Q Consensus 237 ~ 237 (272)
.
T Consensus 78 g 78 (327)
T 2c7p_A 78 G 78 (327)
T ss_dssp E
T ss_pred C
Confidence 4
No 315
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.79 E-value=0.17 Score=45.18 Aligned_cols=91 Identities=9% Similarity=0.085 Sum_probs=62.1
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC---CC----
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD---FT---- 225 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~---~~---- 225 (272)
+.++.+||-.|| |.|..+..++...+.+|.+++.+++.++.+++ +. . . ..+ |..+ +.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g---------~-~-~~~--d~~~~~~~~~~~~ 208 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IG---------F-D-AAF--NYKTVNSLEEALK 208 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT---------C-S-EEE--ETTSCSCHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC---------C-c-EEE--ecCCHHHHHHHHH
Confidence 566789999997 78888888876678899999999988888843 31 1 1 111 2221 10
Q ss_pred -CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 -~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...+.+|+++.+-.- ..+..+.+.|++||.++..
T Consensus 209 ~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 209 KASPDGYDCYFDNVGG---------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHCTTCEEEEEESSCH---------HHHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCeEEEECCCh---------HHHHHHHHHHhcCCEEEEE
Confidence 011469998865441 2467788999999998754
No 316
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.72 E-value=0.084 Score=47.62 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=62.6
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
+.++.+||-+|+|. |..+..++...+.+|++++.+++-++.+++ +. ... ++ .+.+.+. ..+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG---------a~~--v~-~~~~~~~---~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MG---------VKH--FY-TDPKQCK---EELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-TT---------CSE--EE-SSGGGCC---SCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cC---------CCe--ec-CCHHHHh---cCCCE
Confidence 56778999999874 888888865567899999999988888876 31 111 22 3333332 27999
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+-.-.- + ..+..+.+.|+|+|.++..
T Consensus 238 vid~~g~-----~---~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 238 IISTIPT-----H---YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEECCCS-----C---CCHHHHHTTEEEEEEEEEC
T ss_pred EEECCCc-----H---HHHHHHHHHHhcCCEEEEE
Confidence 9854331 2 2566778899999998864
No 317
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.63 E-value=0.21 Score=44.69 Aligned_cols=94 Identities=11% Similarity=0.029 Sum_probs=63.4
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEe-CCCCCC-----C
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFT-----P 226 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~-d~~~~~-----~ 226 (272)
+.++.+||-.|| |.|..+..++...+.+|.+++.+++-++.+++.+.. . ..+.. +..++. .
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~----------~-~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF----------D-DAFNYKEESDLTAALKRC 221 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC----------S-EEEETTSCSCSHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC----------c-eEEecCCHHHHHHHHHHH
Confidence 567789999997 688888888766778999999999888888754421 1 11111 111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..+.+|+|+.+-.- ..+..+.+.|++||.++..
T Consensus 222 ~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 222 FPNGIDIYFENVGG---------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CTTCEEEEEESSCH---------HHHHHHHTTEEEEEEEEEC
T ss_pred hCCCCcEEEECCCH---------HHHHHHHHHHhcCCEEEEE
Confidence 11369998865431 3677788999999998764
No 318
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.43 E-value=0.24 Score=43.51 Aligned_cols=149 Identities=7% Similarity=0.074 Sum_probs=83.2
Q ss_pred HHHHHHhhhhcchhhhhccccCCCCCcchhhhhHHHHH--HHHHhccCCCccCCCCCeeeEeecccchHHHHHHHh----
Q 024100 105 WYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFL--QMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIR---- 178 (272)
Q Consensus 105 ~y~~~~~YW~~~~~~~~~~lggy~~~s~~d~~~s~~~L--~~ll~~~l~~~~~~~~~~VLDiGcGtG~~t~~LLa~---- 178 (272)
.-.+-.+|+..-+.+....+..+..+... .....++ ..+.... ..-++.|+|+||-.|..+..+ +.
T Consensus 22 ~~~~l~~~~~~~~~~~~e~l~~~~~~~~~--~~l~~~l~~~~l~~~i-----~~vpG~ivE~GV~rG~S~~~~-a~~~~~ 93 (257)
T 3tos_A 22 TTQRLTKLLTNSPIPTEELVNNLPLFLRR--HQMTDLLSMDALYRQV-----LDVPGVIMEFGVRFGRHLGTF-AALRGV 93 (257)
T ss_dssp HHHHHHHHHHTCCSCGGGGGGCGGGGCCH--HHHHHHHHHHHHHHHT-----TTSCSEEEEECCTTCHHHHHH-HHHHHH
T ss_pred HHHHHHHHHhcCCCChHHHHHhHHhhhhH--HHHHHHHHHHHHHHHh-----hCCCCeEEEEecccCHHHHHH-HHHHHH
Confidence 33445667776555555555555422221 1111122 2333322 134679999999999988865 33
Q ss_pred -----cCCcEEEEe-----CCHH----------------------HHHHH---HHhccccCCCCCCCCCceEEEEeCCCC
Q 024100 179 -----YFNEVDLLE-----PVSH----------------------FLDAA---RESLAPENHMAPDMHKATNFFCVPLQD 223 (272)
Q Consensus 179 -----~~~~v~~vD-----~S~~----------------------mld~A---~~~l~~~~~~~~~~~~~v~~~~~d~~~ 223 (272)
...++.++| |.+. .++.. .++.... .....+++++.+++.+
T Consensus 94 l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~----g~~~~~i~li~G~~~d 169 (257)
T 3tos_A 94 YEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSDFF----GHVTQRSVLVEGDVRE 169 (257)
T ss_dssp HCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTSTT----TTSCCSEEEEESCHHH
T ss_pred hcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhhhhc----CCCCCcEEEEEecHHH
Confidence 135889998 3321 11111 1111111 0113689999999865
Q ss_pred CCC------CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 224 FTP------ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 224 ~~~------~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.-+ +..++|+|++-.-. + ..-...+..+...|+|||+|++-+
T Consensus 170 TL~~~l~~~~~~~~dlv~ID~D~-Y---~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 170 TVPRYLAENPQTVIALAYFDLDL-Y---EPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HHHHHHHHCTTCCEEEEEECCCC-H---HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHHHhCCCCceEEEEEcCcc-c---chHHHHHHHHHHHhCCCcEEEEcC
Confidence 321 23479999875532 2 223367888999999999988654
No 319
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.21 E-value=0.22 Score=44.61 Aligned_cols=94 Identities=18% Similarity=0.098 Sum_probs=63.2
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC----CCCC
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~ 229 (272)
..++.+||-.|+|. |..+..++...+.+|++++.+++-++.+++. . .. ..+...-+++. -..+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-G---------a~--~~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL-G---------AE--VAVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-T---------CS--EEEETTTSCHHHHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-C---------CC--EEEeCCCcCHHHHHHHhCC
Confidence 56778999999874 8888888766788999999999999988763 1 11 12221111110 0012
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+|+|+-... .. ..++.+.+.|+|+|.++..
T Consensus 232 ~~d~vid~~g------~~--~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 232 GAHGVLVTAV------SP--KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SEEEEEESSC------CH--HHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEeCC------CH--HHHHHHHHHhccCCEEEEe
Confidence 6888875432 12 4778888999999998764
No 320
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.14 E-value=0.33 Score=45.16 Aligned_cols=46 Identities=24% Similarity=0.338 Sum_probs=36.1
Q ss_pred CCCCeeeEeecccchHHHHHHHhc------CC--cEEEEeCCHHHHHHHHHhcc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRY------FN--EVDLLEPVSHFLDAARESLA 201 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~------~~--~v~~vD~S~~mld~A~~~l~ 201 (272)
+.+-.|+|+|+|.|.++..+|... +. ++.+||+|+...+.-++.+.
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 445689999999999999887321 12 78999999999887777764
No 321
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.12 E-value=0.29 Score=44.19 Aligned_cols=94 Identities=16% Similarity=0.100 Sum_probs=61.3
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC---CCC----CC
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP---LQD----FT 225 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d---~~~----~~ 225 (272)
+.++.+||-+|+|. |..+..++...+. +|++++.++.-++.+++. . .. .++..+ -.+ +.
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-G---------a~--~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI-G---------AD--LVLQISKESPQEIARKVE 236 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-T---------CS--EEEECSSCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-C---------CC--EEEcCcccccchHHHHHH
Confidence 56778999999884 8888888655666 899999999988888753 1 11 122211 000 00
Q ss_pred -CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 -~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.....+|+|+-.-.- + ..+..+.+.|+|||.++..
T Consensus 237 ~~~~~g~D~vid~~g~-----~---~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 237 GQLGCKPEVTIECTGA-----E---ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHTSCCSEEEECSCC-----H---HHHHHHHHHSCTTCEEEEC
T ss_pred HHhCCCCCEEEECCCC-----h---HHHHHHHHHhcCCCEEEEE
Confidence 001368998854321 1 3677788999999998764
No 322
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.02 E-value=0.61 Score=36.17 Aligned_cols=92 Identities=11% Similarity=-0.046 Sum_probs=58.6
Q ss_pred CCeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCcce
Q 024100 158 HLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (272)
Q Consensus 158 ~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD 232 (272)
..+|+=+|||. |......|.+.+..|+++|.+++-++.+++. .+.++.+|..+... .-..+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-------------g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-------------GVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------------TCEEEESCTTSHHHHHHTTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-------------CCCEEECCCCCHHHHHhcCcccCC
Confidence 34788899873 5444445456788999999999988877652 35677788754321 113688
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+|++... +++....+....+.+.|+..++.
T Consensus 74 ~vi~~~~-----~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 74 WLILTIP-----NGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp EEEECCS-----CHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEEEECC-----ChHHHHHHHHHHHHHCCCCeEEE
Confidence 8876533 22222334445666778877764
No 323
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.93 E-value=1.4 Score=33.23 Aligned_cols=92 Identities=9% Similarity=0.005 Sum_probs=52.4
Q ss_pred CeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC----CCCCccee
Q 024100 159 LVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYDV 233 (272)
Q Consensus 159 ~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fDl 233 (272)
.+|+=+|+|. |......|.+.+.+|.++|.++..++..++.. .+.++.+|..+.. .....+|+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~------------~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI------------DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------------SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc------------CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 4788888763 33332233456778999999988776665432 2345566654321 11236898
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
|+..-- +++....+..+.+.+.++-.++.
T Consensus 73 vi~~~~-----~~~~~~~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 73 YIAVTG-----KEEVNLMSSLLAKSYGINKTIAR 101 (140)
T ss_dssp EEECCS-----CHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEeeC-----CchHHHHHHHHHHHcCCCEEEEE
Confidence 887632 22333455555666777644443
No 324
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.91 E-value=0.51 Score=42.95 Aligned_cols=97 Identities=15% Similarity=0.016 Sum_probs=62.9
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCC----CC-CCCC
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL----QD-FTPE 227 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~----~~-~~~~ 227 (272)
+.++.+||=+|+|. |..+..++...+. .|.+++.++.-++.+++. .. ...+++...|+ .+ ....
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga--------~~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV-GA--------TATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-TC--------SEEECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-CC--------CEEECCCCcCHHHHHHhhhhcc
Confidence 56778999999874 8888878655666 899999999988888764 11 11111111111 01 0012
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+.+|+|+-.-. .. ..+..+.+.|++||.++..
T Consensus 251 ~gg~Dvvid~~G------~~--~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIECAG------VA--ETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEECSC------CH--HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCC------CH--HHHHHHHHHhccCCEEEEE
Confidence 247999986432 12 4778889999999998864
No 325
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.90 E-value=0.57 Score=42.08 Aligned_cols=94 Identities=14% Similarity=0.017 Sum_probs=61.8
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-CCCCC------C
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~~~~~------~ 226 (272)
+.++.+||-+|+|. |..+..++...+.+|.+++.+++-++.+++. . .. ..+..+ -.++. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-G---------a~--~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC-G---------AD--VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-T---------CS--EEEECCTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh-C---------CC--EEEcCcccccHHHHHHHHh
Confidence 45778999999874 7888878655677899999999988888753 1 11 122211 01110 0
Q ss_pred C---CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 E---TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~---~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
. ...+|+|+-+-.- . ..++.+.+.|+++|.++..
T Consensus 234 ~~~~g~g~D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGN------E--KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHSSSCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEEC
T ss_pred ccccCCCCCEEEECCCC------H--HHHHHHHHHHhcCCEEEEE
Confidence 0 1369998854331 1 3677788999999998764
No 326
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.84 E-value=0.32 Score=43.33 Aligned_cols=94 Identities=12% Similarity=0.006 Sum_probs=63.4
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-----CC
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-----~~ 227 (272)
+.++.+||-.|| |.|..+..++...+.+|.+++.+++-++.+.+.+.. -..+...-+++. ..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF-----------DGAIDYKNEDLAAGLKREC 215 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC-----------SEEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-----------CEEEECCCHHHHHHHHHhc
Confidence 567889999998 688888888766788999999999888888444421 111221111110 01
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+.+|+|+.+-.- ..+..+.+.|+++|.++..
T Consensus 216 ~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 216 PKGIDVFFDNVGG---------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp TTCEEEEEESSCH---------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCceEEEECCCc---------chHHHHHHHHhhCCEEEEE
Confidence 2369998864331 3677788999999998864
No 327
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.79 E-value=0.24 Score=44.61 Aligned_cols=46 Identities=11% Similarity=-0.036 Sum_probs=41.0
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~ 202 (272)
.++..|||.-||+|..+... .+.+.+..++|.++.+++.+++++..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa-~~~gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVA-ERESRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHH-HHTTCEEEEEESCHHHHHHHHGGGSC
T ss_pred CCCCEEEECCCCCCHHHHHH-HHcCCCEEEEeCCHHHHHHHHHHHHh
Confidence 46779999999999999966 57889999999999999999999854
No 328
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.72 E-value=0.36 Score=43.45 Aligned_cols=94 Identities=15% Similarity=-0.009 Sum_probs=62.1
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||=+|+|. |..+..++...+. .|.++|.+++-++.+++.=. . .++...-.++. .
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa---------~---~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA---------T---DIINYKNGDIVEQILKAT 231 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC---------C---EEECGGGSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC---------c---eEEcCCCcCHHHHHHHHc
Confidence 56778999999874 8888878645566 79999999998888876411 1 11211111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+-.-. .+ ..+..+.+.|+|||.++..
T Consensus 232 ~g~g~D~v~d~~g-----~~---~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 232 DGKGVDKVVIAGG-----DV---HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp TTCCEEEEEECSS-----CT---THHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCEEEECCC-----Ch---HHHHHHHHHHhcCCEEEEe
Confidence 1236999985432 12 3678888999999998754
No 329
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.62 E-value=0.073 Score=48.70 Aligned_cols=94 Identities=16% Similarity=0.085 Sum_probs=61.0
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-CCCCCCCCCcce
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRYD 232 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~~~~~~~~~~fD 232 (272)
+.++.+||-+|+|. |..+..++...+.+|++++.|++-++.+++ +.. ...++....+ ++.+. +.+|
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa--------~~vi~~~~~~~~~~~~---~g~D 259 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGA--------DEVVNSRNADEMAAHL---KSFD 259 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTC--------SEEEETTCHHHHHTTT---TCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC--------cEEeccccHHHHHHhh---cCCC
Confidence 56778999999884 888887865567789999999988888876 321 1111110111 11121 4699
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+-.-.- + ..++.+.+.|+++|.++..
T Consensus 260 vvid~~g~-----~---~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 260 FILNTVAA-----P---HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEECCSS-----C---CCHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCC-----H---HHHHHHHHHhccCCEEEEe
Confidence 98854331 1 2456677899999998754
No 330
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.46 E-value=0.45 Score=42.89 Aligned_cols=95 Identities=16% Similarity=-0.028 Sum_probs=63.5
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCCc-EEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEe-----CCC----C
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFNE-VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-----PLQ----D 223 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~~-v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~-----d~~----~ 223 (272)
+.++.+||=+|+|. |..+..++...+.+ |.+++.+++-++.+++. .. ..+.+... ++. +
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~---------~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP---------EVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT---------TCEEEECCSCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch---------hcccccccccchHHHHHHHHH
Confidence 56778999999874 88888886555665 99999999999999876 31 12233211 110 0
Q ss_pred CCCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 224 ~~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.. ....+|+|+-.-. .. ..+..+.+.|++||.++..
T Consensus 247 ~t-~g~g~Dvvid~~g------~~--~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 247 SF-GGIEPAVALECTG------VE--SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HT-SSCCCSEEEECSC------CH--HHHHHHHHHSCTTCEEEEC
T ss_pred Hh-CCCCCCEEEECCC------Ch--HHHHHHHHHhcCCCEEEEE
Confidence 11 1246999886433 12 4677888999999998864
No 331
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.25 E-value=0.075 Score=47.86 Aligned_cols=94 Identities=14% Similarity=0.026 Sum_probs=61.3
Q ss_pred CCCeeeEeeccc-chHHHHHHHhc--CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE-eCC-CCCCCCCCcc
Q 024100 157 QHLVALDCGSGI-GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPL-QDFTPETGRY 231 (272)
Q Consensus 157 ~~~~VLDiGcGt-G~~t~~LLa~~--~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~-~d~-~~~~~~~~~f 231 (272)
++.+||-+|+|. |..+..++... +.+|++++.|++-++.+++. .. ...+++.. .++ .++. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-Ga--------~~vi~~~~~~~~~~~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-GA--------DYVSEMKDAESLINKLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-TC--------SEEECHHHHHHHHHHHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-CC--------CEEeccccchHHHHHhh-cCCCc
Confidence 677999999874 78888786556 67899999999988888763 21 11111111 111 1111 12369
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|+-.-.- + ..++.+.+.|+|+|.++..
T Consensus 240 D~vid~~g~-----~---~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDLVGT-----E---ETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEESSCC-----H---HHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCC-----h---HHHHHHHHHhhcCCEEEEe
Confidence 999865431 1 4678888999999998764
No 332
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.86 E-value=1.1 Score=36.05 Aligned_cols=92 Identities=15% Similarity=0.021 Sum_probs=54.1
Q ss_pred CCeeeEeecc-cchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC----C-CCCc
Q 024100 158 HLVALDCGSG-IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----P-ETGR 230 (272)
Q Consensus 158 ~~~VLDiGcG-tG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~----~-~~~~ 230 (272)
..+|+=+||| .|......|.+. +..|+++|.+++-++.+++. .+.++.+|..+.. . .-..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-------------g~~~~~gd~~~~~~l~~~~~~~~ 105 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-------------GRNVISGDATDPDFWERILDTGH 105 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-------------TCCEEECCTTCHHHHHTBCSCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-------------CCCEEEcCCCCHHHHHhccCCCC
Confidence 4578888887 354444444566 78999999999877776542 2345566654321 1 1236
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+|+|+...- +++....+-...+.+.|++.++.
T Consensus 106 ad~vi~~~~-----~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 106 VKLVLLAMP-----HHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp CCEEEECCS-----SHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEeCC-----ChHHHHHHHHHHHHHCCCCEEEE
Confidence 898886432 22222333344555667777664
No 333
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.73 E-value=0.34 Score=43.54 Aligned_cols=94 Identities=12% Similarity=0.138 Sum_probs=62.3
Q ss_pred CCCCCeeeEeecc--cchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-----CC
Q 024100 155 NNQHLVALDCGSG--IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TP 226 (272)
Q Consensus 155 ~~~~~~VLDiGcG--tG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-----~~ 226 (272)
+.+..+||-.|+| .|..+..++... +.+|.+++.+++.++.+++. .. . .++...-.++ ..
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~---------~--~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GA---------D--YVINASMQDPLAEIRRI 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TC---------S--EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC---------C--EEecCCCccHHHHHHHH
Confidence 5577899999987 778888787666 78999999999988888653 10 1 1111111111 00
Q ss_pred CC-CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~-~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.. +.+|+|+.+-.- . ..++...+.|+++|.++..
T Consensus 236 ~~~~~~d~vi~~~g~------~--~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS------E--KTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TTTSCEEEEEESCCC------H--HHHTTGGGGEEEEEEEEEC
T ss_pred hcCCCceEEEECCCC------H--HHHHHHHHHHhcCCEEEEE
Confidence 11 479998865431 1 4677778899999998764
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.39 E-value=0.6 Score=42.23 Aligned_cols=93 Identities=13% Similarity=-0.039 Sum_probs=62.5
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------CC
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PE 227 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~~ 227 (272)
+.++.+||=+|+|. |..+..++...+.+|++++.+++-++.+++. . . -.++..+-.++. ..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-G---------a--~~vi~~~~~~~~~~v~~~~~ 254 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL-G---------A--DHGINRLEEDWVERVYALTG 254 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-T---------C--SEEEETTTSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc-C---------C--CEEEcCCcccHHHHHHHHhC
Confidence 56788999999874 8888888666688999999999988888763 1 1 112222211211 01
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...+|+|+-+-. . ..+..+.+.|+|+|.++..
T Consensus 255 g~g~D~vid~~g------~---~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 255 DRGADHILEIAG------G---AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp TCCEEEEEEETT------S---SCHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEECCC------h---HHHHHHHHHhhcCCEEEEE
Confidence 236999886533 1 2466677899999998764
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.34 E-value=0.52 Score=42.16 Aligned_cols=93 Identities=13% Similarity=-0.036 Sum_probs=60.4
Q ss_pred CCCCCeeeEeecc--cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGcG--tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||-+||| .|..+..++...+.+|++++.+++-++.+++.-. . ..+...-.++. .
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga---------~---~~~~~~~~~~~~~~~~~~ 209 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA---------A---YVIDTSTAPLYETVMELT 209 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---------S---EEEETTTSCHHHHHHHHT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC---------c---EEEeCCcccHHHHHHHHh
Confidence 5678899999986 7888888876678899999998888888876311 1 12221111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+-+-.- +. +.+..+.|+++|.++..
T Consensus 210 ~~~g~Dvvid~~g~-----~~----~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 210 NGIGADAAIDSIGG-----PD----GNELAFSLRPNGHFLTI 242 (340)
T ss_dssp TTSCEEEEEESSCH-----HH----HHHHHHTEEEEEEEEEC
T ss_pred CCCCCcEEEECCCC-----hh----HHHHHHHhcCCCEEEEE
Confidence 12369999865432 21 12334789999998864
No 336
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.21 E-value=0.36 Score=42.75 Aligned_cols=89 Identities=10% Similarity=0.051 Sum_probs=59.6
Q ss_pred eeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-CCCCCCCCCcceeeEe
Q 024100 160 VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRYDVIWV 236 (272)
Q Consensus 160 ~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~~~~~~~~~~fDlIvs 236 (272)
+||=.|+ |.|..+..++...+.+|++++.|++-++.+++. .. ...++....+ +..+ ..+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga--------~~vi~~~~~~~~~~~--~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL-GA--------NRILSRDEFAESRPL--EKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH-TC--------SEEEEGGGSSCCCSS--CCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CC--------CEEEecCCHHHHHhh--cCCCccEEEE
Confidence 5998886 589999988766788999999999988888763 21 1111111111 1122 2347998875
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.-. . ..+..+.+.|+++|.++..
T Consensus 218 ~~g-----~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 218 TVG-----D----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp SSC-----H----HHHHHHHHTEEEEEEEEEC
T ss_pred CCC-----c----HHHHHHHHHHhcCCEEEEE
Confidence 422 1 3778888999999998864
No 337
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.12 E-value=0.3 Score=43.91 Aligned_cols=92 Identities=12% Similarity=0.066 Sum_probs=62.3
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCC---CCC----
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ---DFT---- 225 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~---~~~---- 225 (272)
+.++.+||-+|+ |.|..+..++...+.+|.+++.+++.++.+++ +. . . ..+ |.. ++.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~g---------~-~-~~~--d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IG---------G-E-VFI--DFTKEKDIVGAVL 232 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-TT---------C-C-EEE--ETTTCSCHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-cC---------C-c-eEE--ecCccHhHHHHHH
Confidence 567789999998 68888888876677899999988887877765 21 1 1 111 222 110
Q ss_pred -CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 -~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...+.+|+|+.+-.. . ..++.+.+.|+++|.++..
T Consensus 233 ~~~~~~~D~vi~~~g~------~--~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 233 KATDGGAHGVINVSVS------E--AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHHTSCEEEEEECSSC------H--HHHHHHTTSEEEEEEEEEC
T ss_pred HHhCCCCCEEEECCCc------H--HHHHHHHHHHhcCCEEEEE
Confidence 001258998865431 1 4678888999999998764
No 338
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.91 E-value=0.59 Score=41.59 Aligned_cols=93 Identities=17% Similarity=0.133 Sum_probs=62.5
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||=+|+ |.|..+..++...+.+|.+++.+++-++.+++. . .-..+...-+++. .
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-g-----------a~~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY-G-----------AEYLINASKEDILRQVLKFT 213 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-T-----------CSEEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C-----------CcEEEeCCCchHHHHHHHHh
Confidence 567789999993 678888888766788999999999988888663 1 1112222111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+.+-.- ..+..+.+.|++||.++..
T Consensus 214 ~~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 214 NGKGVDASFDSVGK---------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp TTSCEEEEEECCGG---------GGHHHHHHHEEEEEEEEEC
T ss_pred CCCCceEEEECCCh---------HHHHHHHHHhccCCEEEEE
Confidence 12369999865431 2566778899999998764
No 339
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=90.82 E-value=0.3 Score=43.52 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=49.5
Q ss_pred eeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC-CcceeeEe
Q 024100 160 VALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDVIWV 236 (272)
Q Consensus 160 ~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fDlIvs 236 (272)
+|||+=||.|.++..| .+. +.-+-++|.++..++.-+.+.. -.++++|+.++.... ...|+|+.
T Consensus 2 kvidLFsG~GG~~~G~-~~aG~~~v~a~e~d~~a~~ty~~N~~------------~~~~~~DI~~i~~~~~~~~D~l~g 67 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGF-QKAGFRIICANEYDKSIWKTYESNHS------------AKLIKGDISKISSDEFPKCDGIIG 67 (331)
T ss_dssp EEEEESCTTCHHHHHH-HHTTCEEEEEEECCTTTHHHHHHHCC------------SEEEESCGGGCCGGGSCCCSEEEC
T ss_pred eEEEeCcCccHHHHHH-HHCCCEEEEEEeCCHHHHHHHHHHCC------------CCcccCChhhCCHhhCCcccEEEe
Confidence 7999999999999988 455 5556789999999988888762 256788988775432 36899994
No 340
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.71 E-value=0.94 Score=40.47 Aligned_cols=92 Identities=18% Similarity=0.131 Sum_probs=61.5
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.++.+||-+|+| .|..+..++...+.+|++++.++.-++.+++ +. .. .+ .|..+-+..
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lG---------a~--~~--~d~~~~~~~~~~~~~ 227 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LG---------AD--LV--VNPLKEDAAKFMKEK 227 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TT---------CS--EE--ECTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CC---------CC--EE--ecCCCccHHHHHHHH
Confidence 4567899999986 5888887766667899999999998888865 31 11 11 122211100
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+.+|+|+.+-.. . ..++.+.+.|+++|.++..
T Consensus 228 ~~~~d~vid~~g~-----~---~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 228 VGGVHAAVVTAVS-----K---PAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HSSEEEEEESSCC-----H---HHHHHHHHHEEEEEEEEEC
T ss_pred hCCCCEEEECCCC-----H---HHHHHHHHHhhcCCEEEEe
Confidence 0368998864331 1 4677888999999998764
No 341
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=90.50 E-value=0.33 Score=43.43 Aligned_cols=70 Identities=11% Similarity=0.043 Sum_probs=52.2
Q ss_pred CCCCCeeeEeecccchHHHHHHHhcCCc---EEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCC---
Q 024100 155 NNQHLVALDCGSGIGRITKNLLIRYFNE---VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET--- 228 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG~~t~~LLa~~~~~---v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~--- 228 (272)
.....+++|+=||.|.++..+ .+.+.+ |.++|.++..++.-+.+.. ...++++|+.++...+
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~-~~aG~~~~~v~a~E~d~~a~~ty~~N~~-----------~~~~~~~DI~~i~~~~i~~ 80 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVL-KDLGIQVDRYIASEVCEDSITVGMVRHQ-----------GKIMYVGDVRSVTQKHIQE 80 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHH-HHTTBCEEEEEEECCCHHHHHHHHHHTT-----------TCEEEECCGGGCCHHHHHH
T ss_pred cCCCCEEEEeCcCccHHHHHH-HHCCCccceEEEEECCHHHHHHHHHhCC-----------CCceeCCChHHccHHHhcc
Confidence 345669999999999999988 455444 5889999998888877752 3357788988775321
Q ss_pred -CcceeeEe
Q 024100 229 -GRYDVIWV 236 (272)
Q Consensus 229 -~~fDlIvs 236 (272)
+.+|+|+.
T Consensus 81 ~~~~Dll~g 89 (295)
T 2qrv_A 81 WGPFDLVIG 89 (295)
T ss_dssp TCCCSEEEE
T ss_pred cCCcCEEEe
Confidence 36899994
No 342
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.50 E-value=0.9 Score=40.93 Aligned_cols=93 Identities=10% Similarity=0.049 Sum_probs=61.6
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||-.|+ |.|..+..++...+.+|.+++.+++-++.+++. . .. ..+..+-+++. .
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-g---------a~--~~~d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN-G---------AH--EVFNHREVNYIDKIKKYV 235 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-T---------CS--EEEETTSTTHHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc-C---------CC--EEEeCCCchHHHHHHHHc
Confidence 567789999996 678888888766788999999999888877542 1 11 11221111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+.+-.- ..+..+.+.|+++|.++..
T Consensus 236 ~~~~~D~vi~~~G~---------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 236 GEKGIDIIIEMLAN---------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CTTCEEEEEESCHH---------HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCcEEEEECCCh---------HHHHHHHHhccCCCEEEEE
Confidence 12369998866441 2466778999999998764
No 343
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.20 E-value=1.9 Score=33.00 Aligned_cols=68 Identities=9% Similarity=-0.036 Sum_probs=43.9
Q ss_pred CeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCccee
Q 024100 159 LVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYDV 233 (272)
Q Consensus 159 ~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fDl 233 (272)
.+|+=+|||. |......|.+.+.+|.++|.+++-++.+++. .+.++.+|..+... .-..+|+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-------------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-------------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-------------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 3788899863 4433333456678999999999887777642 24677777755321 1236888
Q ss_pred eEechh
Q 024100 234 IWVQWC 239 (272)
Q Consensus 234 Ivs~~v 239 (272)
|++..-
T Consensus 74 vi~~~~ 79 (141)
T 3llv_A 74 VLITGS 79 (141)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 886443
No 344
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=89.94 E-value=0.21 Score=45.46 Aligned_cols=66 Identities=20% Similarity=0.175 Sum_probs=49.9
Q ss_pred CeeeEeecccchHHHHHHHhcC---CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC---CCcce
Q 024100 159 LVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYD 232 (272)
Q Consensus 159 ~~VLDiGcGtG~~t~~LLa~~~---~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD 232 (272)
.+++|+-||.|.++..+. +.+ .-|.++|.++..++.-+.++. ...+++.|+.++... ...+|
T Consensus 4 ~~~idLFaG~GG~~~G~~-~aG~~~~~v~a~e~d~~a~~ty~~N~~-----------~~~~~~~DI~~~~~~~~~~~~~D 71 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWK-ESGLDGEIVAAVDINTVANSVYKHNFP-----------ETNLLNRNIQQLTPQVIKKWNVD 71 (333)
T ss_dssp EEEEEETCTTTHHHHHHH-HHTCSEEEEEEECCCHHHHHHHHHHCT-----------TSCEECCCGGGCCHHHHHHTTCC
T ss_pred CEEEEECcCccHHHHHHH-HcCCCceEEEEEeCCHHHHHHHHHhCC-----------CCceeccccccCCHHHhccCCCC
Confidence 389999999999999884 543 457789999999999988863 234667888777532 12589
Q ss_pred eeEe
Q 024100 233 VIWV 236 (272)
Q Consensus 233 lIvs 236 (272)
+++.
T Consensus 72 ~l~g 75 (333)
T 4h0n_A 72 TILM 75 (333)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9994
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.89 E-value=1.1 Score=40.19 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=61.0
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+ ++.+||-+|+| .|..+..++...+. +|++++.+++-++.+++. .. . .++..+-+++. .
T Consensus 166 ~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~-Ga---------~--~~~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 166 I-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV-GA---------D--YVINPFEEDVVKEVMDIT 232 (348)
T ss_dssp C-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH-TC---------S--EEECTTTSCHHHHHHHHT
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CC---------C--EEECCCCcCHHHHHHHHc
Confidence 5 77899999986 47888877655676 899999999888888753 10 1 11111111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+..-.. . ..++.+.+.|+++|.++..
T Consensus 233 ~g~g~D~vid~~g~-----~---~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 233 DGNGVDVFLEFSGA-----P---KALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp TTSCEEEEEECSCC-----H---HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCEEEECCCC-----H---HHHHHHHHHHhcCCEEEEE
Confidence 11369998865331 1 4677888999999998764
No 346
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=89.89 E-value=0.5 Score=42.58 Aligned_cols=46 Identities=13% Similarity=0.065 Sum_probs=39.7
Q ss_pred CCCCeeeEeecccchHHHHHHHhcCCcEEEEeCCH---HHHHHHHHhccc
Q 024100 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAP 202 (272)
Q Consensus 156 ~~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~---~mld~A~~~l~~ 202 (272)
.++..|||.-||+|..+... .+.+.+.+++|.++ .+++.+++++..
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa-~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVA-IQEGRNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHH-HHHTCEEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCCEEEecCCCCCHHHHHH-HHcCCcEEEEECCccHHHHHHHHHHHHHH
Confidence 46779999999999999966 47789999999999 999999999853
No 347
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=89.87 E-value=0.18 Score=44.75 Aligned_cols=57 Identities=5% Similarity=0.065 Sum_probs=37.7
Q ss_pred CceEEEEeCCCCC-C-CCCCcceeeEechhhhhcCh------------------hhHHHHHHHHHHhcccCcEEEEe
Q 024100 212 KATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLTD------------------DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 212 ~~v~~~~~d~~~~-~-~~~~~fDlIvs~~vl~hl~d------------------~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..+.++++|..++ . .++++||+|+++--.....+ ..+..+++++.++|+|||.+++.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4578999998663 2 34579999998643211100 11346788999999999988653
No 348
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.78 E-value=0.88 Score=40.67 Aligned_cols=93 Identities=12% Similarity=0.053 Sum_probs=62.4
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.+..+||-.|+ |.|..+..++...+.+|++++.+++-++.+++ +. .. ..+...-.++. .
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g---------a~--~~~d~~~~~~~~~~~~~~ 231 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LG---------AD--ETVNYTHPDWPKEVRRLT 231 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT---------CS--EEEETTSTTHHHHHHHHT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC---------CC--EEEcCCcccHHHHHHHHh
Confidence 567789999998 68888888876677899999999998888865 31 11 11211111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+.+-. . ..++.+.+.|+++|.++..
T Consensus 232 ~~~~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 232 GGKGADKVVDHTG-A--------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TTTCEEEEEESSC-S--------SSHHHHHHHEEEEEEEEES
T ss_pred CCCCceEEEECCC-H--------HHHHHHHHhhccCCEEEEE
Confidence 1236999886543 1 2466778899999998764
No 349
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=89.73 E-value=0.2 Score=45.64 Aligned_cols=94 Identities=14% Similarity=0.039 Sum_probs=61.6
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC--CCCCC-----
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP--LQDFT----- 225 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d--~~~~~----- 225 (272)
+.++.+||=+|+| .|..+..++...+. +|+++|.+++-++.+++. . .. .++... -+++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l-G---------a~--~vi~~~~~~~~~~~~i~~ 258 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF-G---------VN--EFVNPKDHDKPIQEVIVD 258 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT-T---------CC--EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-C---------Cc--EEEccccCchhHHHHHHH
Confidence 5677899999987 58888878655566 899999999988888653 1 11 111111 11110
Q ss_pred CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccC-cEEEEe
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARS-GTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~Lkpg-G~liv~ 268 (272)
..++.+|+|+-.-. .+ ..+..+.+.|++| |.++..
T Consensus 259 ~~~gg~D~vid~~g-----~~---~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 259 LTDGGVDYSFECIG-----NV---SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HTTSCBSEEEECSC-----CH---HHHHHHHHTBCTTTCEEEEC
T ss_pred hcCCCCCEEEECCC-----CH---HHHHHHHHHhhccCCEEEEE
Confidence 11236999885433 12 4778889999997 988764
No 350
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.73 E-value=0.44 Score=42.08 Aligned_cols=89 Identities=15% Similarity=0.105 Sum_probs=58.4
Q ss_pred cCCCCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcce
Q 024100 154 RNNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (272)
Q Consensus 154 ~~~~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 232 (272)
.+.++.+||=+|+| .|..+..++...+.+|++++ |++-++.+++. .. -.++. |.+++ .+.+|
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l-Ga-----------~~v~~-d~~~v---~~g~D 201 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR-GV-----------RHLYR-EPSQV---TQKYF 201 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH-TE-----------EEEES-SGGGC---CSCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc-CC-----------CEEEc-CHHHh---CCCcc
Confidence 35678899999987 58888888655677999999 88888888763 11 11111 32223 35799
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+-.-.- + .+..+.+.|+++|.++..
T Consensus 202 vv~d~~g~-----~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 202 AIFDAVNS-----Q----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEECC----------------TTGGGEEEEEEEEEE
T ss_pred EEEECCCc-----h----hHHHHHHHhcCCCEEEEE
Confidence 99854321 1 124567899999998764
No 351
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.71 E-value=0.71 Score=41.37 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=62.7
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||=+|+ |.|..+..++...+.+|++++.+++-++.+++.- .. .++..+ +++. .
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g----------a~--~v~~~~-~~~~~~v~~~~ 223 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVG----------AD--IVLPLE-EGWAKAVREAT 223 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT----------CS--EEEESS-TTHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC----------Cc--EEecCc-hhHHHHHHHHh
Confidence 567789999997 6789998887667889999999888888887631 11 122222 2221 1
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+-+-.- ..+..+.+.|+++|.++..
T Consensus 224 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 224 GGAGVDMVVDPIGG---------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp TTSCEEEEEESCC-----------CHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCch---------hHHHHHHHhhcCCCEEEEE
Confidence 12369999865432 2466778899999998764
No 352
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.52 E-value=1.4 Score=39.73 Aligned_cols=93 Identities=13% Similarity=0.052 Sum_probs=62.5
Q ss_pred CCCCCeeeEee--cccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-----CC
Q 024100 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (272)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-----~~ 227 (272)
+.++.+||-.| .|.|..+..++...+.+|++++.+++-++.+++ +. .. .++..+-+++. ..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~G---------a~--~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LG---------CD--RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT---------CS--EEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cC---------Cc--EEEecCChhHHHHHHHhc
Confidence 45678999999 568888888876677799999999988888875 31 11 12221111110 01
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...+|+|+-+-.- ..++.+.+.|+++|.++..
T Consensus 229 ~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 229 PEGVDVVYESVGG---------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp TTCEEEEEECSCT---------HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCH---------HHHHHHHHHHhcCCEEEEE
Confidence 2369998865431 3677888999999998764
No 353
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.45 E-value=1 Score=39.98 Aligned_cols=93 Identities=9% Similarity=0.018 Sum_probs=62.4
Q ss_pred CCCCCeeeEee--cccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||=.| .|.|..+..++...+.+|++++.+++-++.+++. .. . ..+...-.++. .
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-Ga--------~---~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL-GA--------W---ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TC--------S---EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CC--------C---EEEeCCCccHHHHHHHHh
Confidence 56778999998 3578888888766788999999999988888753 11 1 12221111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+.+-.- ..+..+.+.|+++|.++..
T Consensus 206 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ---------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp TTCCEEEEEESSCG---------GGHHHHHTTEEEEEEEEEC
T ss_pred CCCCceEEEECCCh---------HHHHHHHHHhcCCCEEEEE
Confidence 12369998865431 2566678899999998865
No 354
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.35 E-value=1.3 Score=39.69 Aligned_cols=94 Identities=7% Similarity=-0.043 Sum_probs=62.0
Q ss_pred CCCC--CeeeEeec--ccchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC----
Q 024100 155 NNQH--LVALDCGS--GIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (272)
Q Consensus 155 ~~~~--~~VLDiGc--GtG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~---- 225 (272)
+.++ .+||-.|+ |.|..+..++...+. +|.+++.+++-++.+++.+.. . ..+...-+++.
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~---------~--~~~d~~~~~~~~~~~ 224 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF---------D--AAINYKKDNVAEQLR 224 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC---------S--EEEETTTSCHHHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---------c--eEEecCchHHHHHHH
Confidence 4566 79999997 688888878766777 999999998888877764421 1 11111111110
Q ss_pred -CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 -~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...+.+|+|+.+-. . ..+..+.+.|+++|.++..
T Consensus 225 ~~~~~~~d~vi~~~G-------~--~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 225 ESCPAGVDVYFDNVG-------G--NISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHCTTCEEEEEESCC-------H--HHHHHHHHTEEEEEEEEEC
T ss_pred HhcCCCCCEEEECCC-------H--HHHHHHHHHhccCcEEEEE
Confidence 01126899886543 1 4677888999999998764
No 355
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.32 E-value=0.92 Score=40.85 Aligned_cols=89 Identities=18% Similarity=0.088 Sum_probs=56.1
Q ss_pred CeeeEeecc-cchHH-HHHH-HhcCCc-EEEEeCCHH---HHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-CC--C
Q 024100 159 LVALDCGSG-IGRIT-KNLL-IRYFNE-VDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PE--T 228 (272)
Q Consensus 159 ~~VLDiGcG-tG~~t-~~LL-a~~~~~-v~~vD~S~~---mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-~~--~ 228 (272)
.+||=+|+| .|..+ ..++ ...+.+ |++++.+++ -++.+++ +. . +.....-+++. .. .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-lG---------a---~~v~~~~~~~~~i~~~~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-LD---------A---TYVDSRQTPVEDVPDVY 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-TT---------C---EEEETTTSCGGGHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-cC---------C---cccCCCccCHHHHHHhC
Confidence 799999976 57777 7775 445666 999998887 7788864 31 1 11111111110 00 1
Q ss_pred CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+.+|+|+-.-. .+ ..++.+.+.|+++|.++..
T Consensus 241 gg~Dvvid~~g-----~~---~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 241 EQMDFIYEATG-----FP---KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CCEEEEEECSC-----CH---HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCC-----Ch---HHHHHHHHHHhcCCEEEEE
Confidence 26899885432 11 3677888999999998764
No 356
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.15 E-value=1 Score=40.20 Aligned_cols=93 Identities=15% Similarity=0.040 Sum_probs=62.1
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-----C-
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P- 226 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-----~- 226 (272)
..++.+||=+|+|. |..+..++... +.+|+++|.+++-++.+++. . .. .++..+- ++. .
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l-G---------a~--~~i~~~~-~~~~~v~~~t 235 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV-G---------AD--AAVKSGA-GAADAIRELT 235 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT-T---------CS--EEEECST-THHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-C---------CC--EEEcCCC-cHHHHHHHHh
Confidence 45678999999874 88888786445 67999999999999988763 1 11 1222111 110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+-.-. .. ..++.+.+.|+++|.++..
T Consensus 236 ~g~g~d~v~d~~G------~~--~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 236 GGQGATAVFDFVG------AQ--STIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp GGGCEEEEEESSC------CH--HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCeEEEECCC------CH--HHHHHHHHHHhcCCEEEEE
Confidence 1126899885433 12 4788889999999998864
No 357
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.01 E-value=0.86 Score=40.33 Aligned_cols=93 Identities=11% Similarity=0.032 Sum_probs=62.1
Q ss_pred CCCCCeeeEee--cccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.+..+||-.| .|.|..+..++...+.+|.+++.+++-++.+++ +.. . ..+...-+++. .
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~---------~--~~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGA---------W--QVINYREEDLVERLKEIT 205 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTC---------S--EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC---------C--EEEECCCccHHHHHHHHh
Confidence 56778999999 568888888876678899999999988888876 311 1 11111111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+.+-. . ..++.+.+.|+++|.++..
T Consensus 206 ~~~~~D~vi~~~g------~---~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 206 GGKKVRVVYDSVG------R---DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp TTCCEEEEEECSC------G---GGHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCc------h---HHHHHHHHHhcCCCEEEEE
Confidence 1236999886543 1 3567788999999998764
No 358
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.95 E-value=1.8 Score=40.25 Aligned_cols=92 Identities=13% Similarity=0.118 Sum_probs=62.2
Q ss_pred CeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCccee
Q 024100 159 LVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYDV 233 (272)
Q Consensus 159 ~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fDl 233 (272)
.+|+=||+| .|......|...+..|++||.++..++.+++. .+.++.+|..+... .-...|+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-------------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-------------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-------------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-------------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 468888887 34444445556788999999999999888752 34577888866421 1246888
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|++..- +++....+....+.+.|+..++..
T Consensus 72 viv~~~-----~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 72 LINAID-----DPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp EEECCS-----SHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEECCC-----ChHHHHHHHHHHHHhCCCCeEEEE
Confidence 876543 344445666677778888777653
No 359
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.82 E-value=1 Score=40.78 Aligned_cols=94 Identities=12% Similarity=0.039 Sum_probs=60.7
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-C-CCCC-----
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-L-QDFT----- 225 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~-~~~~----- 225 (272)
+.++.+||-+|+| .|..+..++...+. .|++++.+++-++.+++ +. .. .++... . +++.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lG---------a~--~vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FG---------AT--DFVNPNDHSEPISQVLSK 257 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TT---------CC--EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hC---------Cc--eEEeccccchhHHHHHHH
Confidence 5677899999987 47888877655566 79999999998888875 31 11 111111 0 1110
Q ss_pred CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccC-cEEEEe
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARS-GTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~Lkpg-G~liv~ 268 (272)
...+.+|+|+-.-.- . ..+..+.+.|+++ |.++..
T Consensus 258 ~~~~g~D~vid~~g~------~--~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 258 MTNGGVDFSLECVGN------V--GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHTSCBSEEEECSCC------H--HHHHHHHHTBCTTTCEEEEC
T ss_pred HhCCCCCEEEECCCC------H--HHHHHHHHHhhcCCcEEEEE
Confidence 011368998854321 1 4678888999999 998764
No 360
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.56 E-value=1.2 Score=40.31 Aligned_cols=94 Identities=11% Similarity=-0.087 Sum_probs=60.8
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-C-CCCC-----
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-L-QDFT----- 225 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~-~~~~----- 225 (272)
+.++.+||=+|+| .|..+..++...+. .|++++.+++-++.+++ +. .. .++... . +++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG---------a~--~vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LG---------AT--ECLNPKDYDKPIYEVICE 256 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TT---------CS--EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cC---------Cc--EEEecccccchHHHHHHH
Confidence 5677899999987 47888877645566 79999999988888875 31 11 111111 0 1110
Q ss_pred CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccC-cEEEEe
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARS-GTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~Lkpg-G~liv~ 268 (272)
...+.+|+|+-.-.- + ..+..+.+.|+++ |.++..
T Consensus 257 ~t~gg~Dvvid~~g~-----~---~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 257 KTNGGVDYAVECAGR-----I---ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HTTSCBSEEEECSCC-----H---HHHHHHHHTBCTTTCEEEEC
T ss_pred HhCCCCCEEEECCCC-----H---HHHHHHHHHHhcCCCEEEEE
Confidence 012369998854321 1 4678888999999 998754
No 361
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.56 E-value=1.2 Score=40.25 Aligned_cols=94 Identities=12% Similarity=-0.028 Sum_probs=60.8
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-C-CCCC-----
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-L-QDFT----- 225 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~-~~~~----- 225 (272)
+.++.+||-+|+|. |..+..++...+. .|++++.|++-++.+++. .. . .++... . +++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga---------~--~vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF-GA---------T--ECINPQDFSKPIQEVLIE 255 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH-TC---------S--EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CC---------c--eEeccccccccHHHHHHH
Confidence 56778999999874 7788877655566 799999999888888753 11 1 111111 0 1110
Q ss_pred CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccC-cEEEEe
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARS-GTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~Lkpg-G~liv~ 268 (272)
...+.+|+|+-.-.- . ..+..+.+.|+++ |.++..
T Consensus 256 ~~~~g~D~vid~~g~------~--~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 256 MTDGGVDYSFECIGN------V--KVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HTTSCBSEEEECSCC------H--HHHHHHHHTBCTTTCEEEEC
T ss_pred HhCCCCCEEEECCCc------H--HHHHHHHHhhccCCcEEEEE
Confidence 011369998854321 1 4678888999999 998754
No 362
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=88.37 E-value=1.4 Score=39.86 Aligned_cols=94 Identities=11% Similarity=-0.069 Sum_probs=60.4
Q ss_pred CCCCCeeeEeeccc-chHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCC--CCCC-----
Q 024100 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL--QDFT----- 225 (272)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~--~~~~----- 225 (272)
+.++.+||-+|+|. |..+..++...+. .|++++.+++-++.+++ +. .. .++...- +++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lG---------a~--~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VG---------AT--ECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TT---------CS--EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hC---------Cc--eEecccccchhHHHHHHH
Confidence 56778999999874 7888877655666 79999999988888864 31 11 1111110 1110
Q ss_pred CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccC-cEEEEe
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARS-GTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~Lkpg-G~liv~ 268 (272)
...+.+|+|+-.-.- + ..+..+.+.|+++ |.++..
T Consensus 257 ~~~~g~D~vid~~g~-----~---~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGR-----L---DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HTTSCBSEEEECSCC-----H---HHHHHHHHHBCTTTCEEEEC
T ss_pred HhCCCCcEEEECCCC-----H---HHHHHHHHHhhcCCcEEEEe
Confidence 012369998854321 1 4677888999999 998754
No 363
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=88.37 E-value=1.1 Score=40.70 Aligned_cols=93 Identities=15% Similarity=0.080 Sum_probs=61.0
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC------C----C
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP------L----Q 222 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d------~----~ 222 (272)
+.++.+||-+|+| .|..+..++...+ .+|++++.+++-++.+++ +. .. .++... + .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lG---------a~--~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IG---------AD--LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TT---------CS--EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-cC---------Cc--EEEeccccCcchHHHHHH
Confidence 4567899999976 5788887765556 599999999998888875 31 11 122211 1 0
Q ss_pred CCCCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 223 DFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 223 ~~~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+.. ....+|+|+-+-.- + ..+..+.+.|+++|.++..
T Consensus 261 ~~~-~g~g~Dvvid~~g~-----~---~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 261 DIT-HGRGADFILEATGD-----S---RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHT-TTSCEEEEEECSSC-----T---THHHHHHHHEEEEEEEEEC
T ss_pred HHh-CCCCCcEEEECCCC-----H---HHHHHHHHHHhcCCEEEEE
Confidence 111 11269998854331 2 3677788999999998764
No 364
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.14 E-value=1.7 Score=39.06 Aligned_cols=93 Identities=18% Similarity=0.123 Sum_probs=60.9
Q ss_pred CCCCCeeeEee--cccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||-.| .|.|..+..++...+.+|.+++.+++-++.+++ +.. . ..+..+-.++. .
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g~----------~-~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK-LGA----------A-AGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTC----------S-EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC----------c-EEEecCChHHHHHHHHHh
Confidence 56778999998 468888888876678899999999988888854 310 1 11111111110 1
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+.+-.- ..+..+.+.|+++|.++..
T Consensus 228 ~~~~~d~vi~~~G~---------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 228 KGAGVNLILDCIGG---------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TTSCEEEEEESSCG---------GGHHHHHHHEEEEEEEEEC
T ss_pred cCCCceEEEECCCc---------hHHHHHHHhccCCCEEEEE
Confidence 12369998865432 1356667899999998764
No 365
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=88.10 E-value=0.59 Score=41.46 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=58.7
Q ss_pred CCCCC-eeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC---CCCCCCCC
Q 024100 155 NNQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP---LQDFTPET 228 (272)
Q Consensus 155 ~~~~~-~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d---~~~~~~~~ 228 (272)
+.+.. +||=.|+ |.|..+..++...+.+|.+++.+++-++.+++ +.. ...++....+ +... ..
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa--------~~~i~~~~~~~~~~~~~--~~ 214 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGA--------KEVLAREDVMAERIRPL--DK 214 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTC--------SEEEECC---------C--CS
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCC--------cEEEecCCcHHHHHHHh--cC
Confidence 34443 7999997 68888888876667899999988877888865 321 1111111111 1112 22
Q ss_pred CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+.+|+|+-+-.- ..+..+.+.|+++|.++..
T Consensus 215 ~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 215 QRWAAAVDPVGG---------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CCEEEEEECSTT---------TTHHHHHHTEEEEEEEEEC
T ss_pred CcccEEEECCcH---------HHHHHHHHhhccCCEEEEE
Confidence 469998854331 1356677899999998764
No 366
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=87.83 E-value=1.4 Score=39.72 Aligned_cols=105 Identities=15% Similarity=0.154 Sum_probs=57.0
Q ss_pred CCCeeeEeecccchHHHHHH---HhcCC--cE--EEEeC------------CHHHHHHHHHhccccCCCCCCCCCceEEE
Q 024100 157 QHLVALDCGSGIGRITKNLL---IRYFN--EV--DLLEP------------VSHFLDAARESLAPENHMAPDMHKATNFF 217 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LL---a~~~~--~v--~~vD~------------S~~mld~A~~~l~~~~~~~~~~~~~v~~~ 217 (272)
+.-+|||+|=|||......+ .+..+ ++ +.+|. .....+...+..... ....-..++.
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~----~~~~v~L~l~ 171 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY----EGERLSLKVL 171 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE----ECSSEEEEEE
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc----cCCcEEEEEE
Confidence 34589999999998654322 12232 33 33442 122222222222111 0112345677
Q ss_pred EeCCCCC-C-CCCCcceeeEechhhhhcChhhH--HHHHHHHHHhcccCcEEE
Q 024100 218 CVPLQDF-T-PETGRYDVIWVQWCIGHLTDDDF--VSFFKRAKENIARSGTFL 266 (272)
Q Consensus 218 ~~d~~~~-~-~~~~~fDlIvs~~vl~hl~d~~~--~~~l~~~~r~LkpgG~li 266 (272)
.+|+.+. + .....||+|+.-. |---.+|++ ..+|+.++++++|||.+.
T Consensus 172 ~GDa~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 172 LGDARKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp ESCHHHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred echHHHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 8887543 2 2334799998642 111112332 389999999999999885
No 367
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.80 E-value=2.8 Score=38.41 Aligned_cols=45 Identities=24% Similarity=0.128 Sum_probs=36.0
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHh
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARES 199 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~ 199 (272)
+.++.+||=+|+| .|..+..++...+. .|++++.++.-++.+++.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 5677899999986 47788877655666 899999999999988764
No 368
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.72 E-value=4.3 Score=31.52 Aligned_cols=92 Identities=13% Similarity=0.110 Sum_probs=54.7
Q ss_pred CeeeEeecccchHHHHH---HHhcCCcEEEEeCC-HHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCc
Q 024100 159 LVALDCGSGIGRITKNL---LIRYFNEVDLLEPV-SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGR 230 (272)
Q Consensus 159 ~~VLDiGcGtG~~t~~L---La~~~~~v~~vD~S-~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~ 230 (272)
.+|+=+|+| +++..+ |.+.+..|+++|.+ ++-.+...+... ..+.++.+|..+... .-..
T Consensus 4 ~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~----------~~~~~i~gd~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 4 DHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----------DNADVIPGDSNDSSVLKKAGIDR 71 (153)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----------TTCEEEESCTTSHHHHHHHTTTT
T ss_pred CcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc----------CCCeEEEcCCCCHHHHHHcChhh
Confidence 367777764 444443 34557899999987 454444443331 246788888754321 1236
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
.|+|++..- +++....+....+.+.|...++.
T Consensus 72 ad~vi~~~~-----~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 72 CRAILALSD-----NDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp CSEEEECSS-----CHHHHHHHHHHHHHHTSSSCEEE
T ss_pred CCEEEEecC-----ChHHHHHHHHHHHHHCCCCEEEE
Confidence 888886543 23444566666677777766654
No 369
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.55 E-value=0.27 Score=44.95 Aligned_cols=99 Identities=7% Similarity=0.023 Sum_probs=57.1
Q ss_pred CCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 158 ~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
+.+|+=+|+| .|..+..++...+.+|+++|.+++-++.+++.... .+.....+.+++...-..+|+|+.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----------RVELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----------GSEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----------eeEeeeCCHHHHHHHHcCCCEEEE
Confidence 4799999986 56656656556677999999999888877765421 122221111111100025899986
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.-....-..+. -+.+.+.+.++|||.+++.
T Consensus 237 ~~~~~~~~~~~--li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 237 AVLVPGRRAPI--LVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp CCCCTTSSCCC--CBCHHHHTTSCTTCEEEET
T ss_pred CCCcCCCCCCe--ecCHHHHhhCCCCCEEEEE
Confidence 44332211111 1134456778999998874
No 370
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=87.42 E-value=0.77 Score=41.07 Aligned_cols=92 Identities=14% Similarity=0.058 Sum_probs=58.3
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-----CC
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-----~~ 227 (272)
+ ++.+||-+|+| .|..+..++...+. +|++++.+++-++.+++. .. .++...-+++. ..
T Consensus 163 ~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~------------~v~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 163 V-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD------------RLVNPLEEDLLEVVRRVT 228 (343)
T ss_dssp C-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS------------EEECTTTSCHHHHHHHHH
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH------------hccCcCccCHHHHHHHhc
Confidence 5 77899999986 47777777655676 899999998776666442 10 11111111110 00
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...+|+|+-.-.- + ..++...+.|+++|.++..
T Consensus 229 ~~g~D~vid~~g~-----~---~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 229 GSGVEVLLEFSGN-----E---AAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SSCEEEEEECSCC-----H---HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCC-----H---HHHHHHHHHHhcCCEEEEE
Confidence 2369998854331 1 4677888999999998764
No 371
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=87.22 E-value=3 Score=38.88 Aligned_cols=94 Identities=11% Similarity=0.055 Sum_probs=62.1
Q ss_pred cCCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------
Q 024100 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (272)
Q Consensus 154 ~~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------ 225 (272)
.+.++.+||=+|+ |.|..+..++...+.+|++++.++.-++.+++. .. . .++...-.++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l-Ga--------~---~vi~~~~~d~~~~~~~~ 292 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM-GA--------E---AIIDRNAEGYRFWKDEN 292 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TC--------C---EEEETTTTTCCSEEETT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh-CC--------c---EEEecCcCccccccccc
Confidence 3567789999997 578888888766788999999999888888653 11 1 11111111110
Q ss_pred -----------------CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 -----------------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 -----------------~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.....+|+|+-+-.- ..+..+.+.|++||.++..
T Consensus 293 ~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~---------~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 293 TQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR---------ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp EECHHHHHHHHHHHHHHHTSCCEEEEEECSCH---------HHHHHHHHHEEEEEEEEES
T ss_pred ccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc---------hhHHHHHHHhhCCcEEEEE
Confidence 011379988854321 3567778899999998864
No 372
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=87.02 E-value=0.69 Score=41.05 Aligned_cols=96 Identities=14% Similarity=0.045 Sum_probs=59.9
Q ss_pred CCCCC-eeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CCCCCc
Q 024100 155 NNQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGR 230 (272)
Q Consensus 155 ~~~~~-~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 230 (272)
+.+.. +||=.|| |.|..+..++...+.+|++++.+++-++.+++ +.. ...++....+.+.. ....+.
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa--------~~v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGA--------SEVISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTC--------SEEEEHHHHCSSCCCSSCCCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC--------cEEEECCCchHHHHHHhhcCC
Confidence 34443 8999997 58888888866667899999988777788765 321 11111111111111 112246
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+|+-+-. . ..+..+.+.|+++|.++..
T Consensus 218 ~d~vid~~g-----~----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 218 WQGAVDPVG-----G----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEEEESCC-----T----HHHHHHHTTEEEEEEEEEC
T ss_pred ccEEEECCc-----H----HHHHHHHHhhcCCCEEEEE
Confidence 999885433 1 2567788899999998754
No 373
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.01 E-value=4.7 Score=34.25 Aligned_cols=82 Identities=10% Similarity=-0.026 Sum_probs=51.2
Q ss_pred CeeeEeecccchHHHHHH---HhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 159 LVALDCGSGIGRITKNLL---IRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 159 ~~VLDiGcGtG~~t~~LL---a~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.+||=.|| |.++..++ .+.+.+|.+++-++.-.+.... ..++++.+|+.++. -..+|+|+
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~d~~--~~~~d~vi 68 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------------SGAEPLLWPGEEPS--LDGVTHLL 68 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------------TTEEEEESSSSCCC--CTTCCEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------------CCCeEEEecccccc--cCCCCEEE
Confidence 47999995 76666554 2347799999877654333221 25789999998876 35799999
Q ss_pred echhhhhcChhhHHHHHHHHHH
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKE 257 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r 257 (272)
.........++....+++.+.+
T Consensus 69 ~~a~~~~~~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 69 ISTAPDSGGDPVLAALGDQIAA 90 (286)
T ss_dssp ECCCCBTTBCHHHHHHHHHHHH
T ss_pred ECCCccccccHHHHHHHHHHHh
Confidence 7655433323323344444444
No 374
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.89 E-value=1.3 Score=39.86 Aligned_cols=88 Identities=23% Similarity=0.199 Sum_probs=56.5
Q ss_pred CCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCH---HHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCC
Q 024100 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETG 229 (272)
Q Consensus 158 ~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~---~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~ 229 (272)
+.+||-+|+| .|..+..++...+.+|++++.++ +-++.+++. . .+.+..+ ++.. ..+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~-g------------a~~v~~~--~~~~~~~~~~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET-K------------TNYYNSS--NGYDKLKDSVG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH-T------------CEEEECT--TCSHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh-C------------CceechH--HHHHHHHHhCC
Confidence 7799999975 46777777655677999999887 666777643 1 1111111 1110 013
Q ss_pred cceeeEechhhhhcChhhHHHHH-HHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFF-KRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l-~~~~r~LkpgG~liv~ 268 (272)
.+|+|+.+-.. + ..+ +.+.+.|+++|.++..
T Consensus 246 ~~d~vid~~g~-----~---~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 246 KFDVIIDATGA-----D---VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp CEEEEEECCCC-----C---THHHHHHGGGEEEEEEEEEC
T ss_pred CCCEEEECCCC-----h---HHHHHHHHHHHhcCCEEEEE
Confidence 69998865432 2 245 7788999999998764
No 375
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=86.53 E-value=0.32 Score=43.96 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=59.7
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCC-CC--CCCCCc
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ-DF--TPETGR 230 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~-~~--~~~~~~ 230 (272)
+.++.+||-+|+| .|..+..++...+.+|++++.|+.-++.+++ +.. . .++...-+ ++ ... +.
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa---------~--~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGA---------D--HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC---------S--EEEEGGGTSCHHHHSC-SC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC---------C--EEEcCcCchHHHHHhh-cC
Confidence 5677899999986 4788887765567789999998888888876 321 1 12221111 11 011 36
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+|+-.-.-. ++ ..++.+.+.|++||.++..
T Consensus 244 ~D~vid~~g~~---~~---~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 244 FDLIVVCASSL---TD---IDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEEEECCSCS---TT---CCTTTGGGGEEEEEEEEEC
T ss_pred CCEEEECCCCC---cH---HHHHHHHHHhcCCCEEEEe
Confidence 99998543310 01 2344567889999998754
No 376
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=86.50 E-value=1.7 Score=39.37 Aligned_cols=94 Identities=12% Similarity=-0.013 Sum_probs=60.4
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-C-CCCC-----
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-L-QDFT----- 225 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~-~~~~----- 225 (272)
+.++.+||=+|+| .|..+..++...+. +|++++.+++-++.+++ +. .. ..+... . +++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG---------a~--~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LG---------AT--DCLNPRELDKPVQDVITE 260 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TT---------CS--EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hC---------Cc--EEEccccccchHHHHHHH
Confidence 5677899999987 47888877655566 79999999988888865 31 11 111111 0 1110
Q ss_pred CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccC-cEEEEe
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARS-GTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~Lkpg-G~liv~ 268 (272)
...+.+|+|+-.-.- . ..+..+.+.|+++ |.++..
T Consensus 261 ~~~~g~Dvvid~~G~------~--~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 261 LTAGGVDYSLDCAGT------A--QTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHTSCBSEEEESSCC------H--HHHHHHHHTBCTTTCEEEEC
T ss_pred HhCCCccEEEECCCC------H--HHHHHHHHHhhcCCCEEEEE
Confidence 011368998854321 2 4678888999999 998753
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=86.43 E-value=0.27 Score=44.45 Aligned_cols=95 Identities=11% Similarity=0.065 Sum_probs=58.4
Q ss_pred CC-CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-CCCCCCCCCcc
Q 024100 155 NN-QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRY 231 (272)
Q Consensus 155 ~~-~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~~~~~~~~~~f 231 (272)
.. ++.+||=+|+| .|..+..++...+.+|++++.+++-++.+++.+.. ...++....+ +.+. . +.+
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa--------~~vi~~~~~~~~~~~--~-~g~ 245 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA--------DDYVIGSDQAKMSEL--A-DSL 245 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC--------SCEEETTCHHHHHHS--T-TTE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC--------ceeeccccHHHHHHh--c-CCC
Confidence 44 67799999976 57777777655677999999998888887755421 1111110000 1111 1 369
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|+-.-.- + ..+....+.|+++|.++..
T Consensus 246 D~vid~~g~-----~---~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 246 DYVIDTVPV-----H---HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEEECCCS-----C---CCSHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCC-----h---HHHHHHHHHhccCCEEEEe
Confidence 998854321 1 1345567899999998764
No 378
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=86.28 E-value=1.6 Score=39.24 Aligned_cols=93 Identities=20% Similarity=0.176 Sum_probs=62.0
Q ss_pred CCCCCeeeEee--cccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-----CC
Q 024100 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (272)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-----~~ 227 (272)
+.++.+||=.| .|.|..+..++...+.+|++++.+++-++.+++.- .. ..+...-+++. ..
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lG----------a~--~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLG----------AK--RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT----------CS--EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC----------CC--EEEeCCchHHHHHHHHHh
Confidence 56778999995 45788888887667889999999999888887631 11 12221111110 00
Q ss_pred CCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+.+|+|+.+-.- ..+..+.+.|+++|.++..
T Consensus 233 ~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 233 GQGVDIILDMIGA---------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp SSCEEEEEESCCG---------GGHHHHHHTEEEEEEEEEC
T ss_pred CCCceEEEECCCH---------HHHHHHHHHhccCCEEEEE
Confidence 2369998865431 2466678899999998764
No 379
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.12 E-value=0.4 Score=43.86 Aligned_cols=100 Identities=7% Similarity=0.035 Sum_probs=55.5
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
++.+|+=+|+| .|......+...+.+|.++|.++.-++.+.+.+. ..+.....+..++.-.-..+|+|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g----------~~~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG----------GRVITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT----------TSEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC----------ceEEEecCCHHHHHHHHhCCCEEE
Confidence 34789999986 4555555555667799999999987777765442 111111111111110012589988
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+-.......+. -+.+++.+.+++||.+++.
T Consensus 235 ~~~g~~~~~~~~--li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 235 GAVLVPGAKAPK--LVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ECCC-------C--CSCHHHHTTSCTTCEEEEC
T ss_pred ECCCCCccccch--hHHHHHHHhhcCCCEEEEE
Confidence 654331100011 1245566778999998864
No 380
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=86.11 E-value=0.39 Score=42.14 Aligned_cols=92 Identities=10% Similarity=-0.023 Sum_probs=59.8
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCC-CCCCCCCCcc
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~f 231 (272)
+.++.+||-+|+ |.|..+..++...+.+|++++.+++-++.+++ +. .. ..+...- .++...-+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g---------a~--~~~~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LG---------AE--EAATYAEVPERAKAWGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TT---------CS--EEEEGGGHHHHHHHTTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC---------CC--EEEECCcchhHHHHhcCc
Confidence 356779999997 57888888876677799999998888888765 31 11 1121110 1110000469
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|+. -. . ..++.+.+.|+++|.++..
T Consensus 191 d~vid-~g--~-------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 191 DLVLE-VR--G-------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEE-CS--C-------TTHHHHHTTEEEEEEEEEC
T ss_pred eEEEE-CC--H-------HHHHHHHHhhccCCEEEEE
Confidence 99886 32 1 2567788899999988754
No 381
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=86.05 E-value=0.42 Score=43.37 Aligned_cols=93 Identities=12% Similarity=0.129 Sum_probs=57.5
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeC-CCCCCCCCCcceee
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d-~~~~~~~~~~fDlI 234 (272)
++.+||=+|+| .|..+..++...+.+|++++.++.-++.+.+.+.. . .++... .+.+.-..+.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa---------~--~v~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA---------D--SFLVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC---------S--EEEETTCHHHHHHTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC---------c--eEEeccCHHHHHHhhCCCCEE
Confidence 67789999976 47777777655677999999998888877755421 1 111111 00010001369998
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+..-.. . ..++.+.+.|+++|.++..
T Consensus 256 id~~g~-----~---~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 256 IDTVSA-----V---HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EECCSS-----C---CCSHHHHHHEEEEEEEEEC
T ss_pred EECCCc-----H---HHHHHHHHHHhcCCEEEEE
Confidence 854331 1 1344566789999998764
No 382
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=85.93 E-value=2 Score=39.81 Aligned_cols=97 Identities=15% Similarity=0.061 Sum_probs=62.8
Q ss_pred cCCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------
Q 024100 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (272)
Q Consensus 154 ~~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------ 225 (272)
.+.++.+||=.|+ |.|..+..++...+.+|++++.+++-++.+++ +. ....++....++.+..
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~-lG--------a~~~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA-LG--------CDLVINRAELGITDDIADDPRR 287 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT--------CCCEEEHHHHTCCTTGGGCHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC--------CCEEEecccccccccccccccc
Confidence 3567889999996 57888888876678899999999998888865 31 1112222122221110
Q ss_pred --------------CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 --------------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 --------------~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.....+|+|+-+-.- ..+....+.|++||.++..
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G~---------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHTGR---------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECSCH---------HHHHHHHHHSCTTCEEEES
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECCCc---------hHHHHHHHHHhcCCEEEEE
Confidence 002368998864331 2466777899999998865
No 383
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.69 E-value=0.39 Score=44.20 Aligned_cols=100 Identities=8% Similarity=-0.011 Sum_probs=56.3
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
++.+|+=+|+| .|......+...+.+|.++|.++.-++.+++.+.. .+.....+..++...-..+|+|+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~----------~~~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG----------RIHTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----------SSEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC----------eeEeccCCHHHHHHHHcCCCEEE
Confidence 45789999986 45555555555667999999999888877765421 11111111111100012589988
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..-..-....+. -+.+++.+.++|||.+++.
T Consensus 237 ~~~~~p~~~t~~--li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 237 GAVLVPGAKAPK--LVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp ECCCCTTSCCCC--CBCHHHHTTSCTTCEEEEG
T ss_pred ECCCcCCCCCcc--eecHHHHhcCCCCcEEEEE
Confidence 643211101111 1234566778999998865
No 384
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=85.58 E-value=1.6 Score=34.27 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=52.3
Q ss_pred CCCCeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC---C-CCCc
Q 024100 156 NQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---P-ETGR 230 (272)
Q Consensus 156 ~~~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~---~-~~~~ 230 (272)
.+..+|+=+|||. |......|...+.+|+++|.++.-++.+++ .....++.+|..+.. . .-..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~------------~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS------------EFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT------------TCCSEEEESCTTSHHHHHTTTGGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh------------cCCCcEEEecCCCHHHHHHcCccc
Confidence 3456899999873 544444445667799999988764432221 112345556653311 0 1136
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+|+|+..-- ++.....+..+.+.+.+...++.
T Consensus 85 ad~Vi~~~~-----~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 85 ADMVFAFTN-----DDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp CSEEEECSS-----CHHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCEEEEEeC-----CcHHHHHHHHHHHHHCCCCeEEE
Confidence 888886533 23333444455555555555553
No 385
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=85.52 E-value=1.9 Score=38.18 Aligned_cols=93 Identities=15% Similarity=0.086 Sum_probs=61.6
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||-.|+ |.|..+..++...+.+|.+++.+++-++.+++ +. .. ..+..+-+++. .
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g---------~~--~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG---------CH--HTINYSTQDFAEVVREIT 210 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT---------CS--EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---------CC--EEEECCCHHHHHHHHHHh
Confidence 567789999995 78888888876778899999999988888865 31 11 11111111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+.+-.- ..++.+.+.|+++|.++..
T Consensus 211 ~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 211 GGKGVDVVYDSIGK---------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp TTCCEEEEEECSCT---------TTHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEECCcH---------HHHHHHHHhhccCCEEEEE
Confidence 12369998865431 3567778899999998764
No 386
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=85.41 E-value=2.8 Score=37.45 Aligned_cols=90 Identities=11% Similarity=0.119 Sum_probs=60.7
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
+.++.+||=+|+ |.|..+..++...+.+|.++ .+++-++.+++. . . +.+. +-+++. .
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l-G---------a---~~i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL-G---------A---TPID-ASREPEDYAAEHT 212 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH-T---------S---EEEE-TTSCHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc-C---------C---CEec-cCCCHHHHHHHHh
Confidence 567889999993 57888888876678899999 888888888653 1 1 1122 222221 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+-+-. . ..+..+.+.|+++|.++..
T Consensus 213 ~~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 213 AGQGFDLVYDTLG-------G--PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TTSCEEEEEESSC-------T--HHHHHHHHHEEEEEEEEES
T ss_pred cCCCceEEEECCC-------c--HHHHHHHHHHhcCCeEEEE
Confidence 1236999885432 1 3677788899999998864
No 387
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.81 E-value=5.7 Score=32.75 Aligned_cols=89 Identities=10% Similarity=0.021 Sum_probs=55.1
Q ss_pred eeeEeecccchHHHHH---HHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCcce
Q 024100 160 VALDCGSGIGRITKNL---LIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (272)
Q Consensus 160 ~VLDiGcGtG~~t~~L---La~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD 232 (272)
+|+=+|+ |.++..+ |.+.+..|+++|.+++-++...+.. .+.++.+|..+... .-..+|
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~------------~~~~i~gd~~~~~~l~~a~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL------------KATIIHGDGSHKEILRDAEVSKND 67 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS------------SSEEEESCTTSHHHHHHHTCCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc------------CCeEEEcCCCCHHHHHhcCcccCC
Confidence 4666676 4444443 2356789999999998877655432 35678888765321 123689
Q ss_pred eeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 233 VIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 233 lIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
+|++..- +++...++....+.+.|...++.
T Consensus 68 ~vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 68 VVVILTP-----RDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp EEEECCS-----CHHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEEEecC-----CcHHHHHHHHHHHHHcCCCeEEE
Confidence 8886532 34444566666666667666654
No 388
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=84.79 E-value=0.93 Score=43.32 Aligned_cols=60 Identities=22% Similarity=0.135 Sum_probs=44.9
Q ss_pred CCCeeeEeecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~ 225 (272)
...+++|+=||.|.++..| .+. +.-|.++|.++..++.-+.++.. .+...+++.|+.++.
T Consensus 87 ~~~~viDLFaG~GGlslG~-~~aG~~~v~avE~d~~A~~ty~~N~~~--------~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGF-ESIGGQCVFTSEWNKHAVRTYKANHYC--------DPATHHFNEDIRDIT 147 (482)
T ss_dssp CSEEEEEESCTTSHHHHHH-HTTTEEEEEEECCCHHHHHHHHHHSCC--------CTTTCEEESCTHHHH
T ss_pred ccceEEEecCCccHHHHHH-HHCCCEEEEEEeCCHHHHHHHHHhccc--------CCCcceeccchhhhh
Confidence 3468999999999999988 455 44578899999999888887631 234456778876653
No 389
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=84.60 E-value=6.8 Score=34.76 Aligned_cols=91 Identities=14% Similarity=0.004 Sum_probs=58.8
Q ss_pred CeeeEeecc-cc-hHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC-CCCCCCccee
Q 024100 159 LVALDCGSG-IG-RITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDV 233 (272)
Q Consensus 159 ~~VLDiGcG-tG-~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fDl 233 (272)
.+|.=||+| .| .++..| .+.+. +|.++|.+++-++.+.+.- .+.-...+..+ . -...|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l-~~~G~~~~V~~~dr~~~~~~~a~~~G------------~~~~~~~~~~~~~---~~~aDv 97 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESISKAVDLG------------IIDEGTTSIAKVE---DFSPDF 97 (314)
T ss_dssp SEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHHHHHHHTT------------SCSEEESCTTGGG---GGCCSE
T ss_pred CEEEEEeeCHHHHHHHHHH-HhCCCCCEEEEEECCHHHHHHHHHCC------------CcchhcCCHHHHh---hccCCE
Confidence 578888987 33 344444 45666 8999999998888776421 11112334433 1 135899
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
|+..-- ......+++++...++||..+++.-+
T Consensus 98 Vilavp-----~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 98 VMLSSP-----VRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp EEECSC-----GGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred EEEeCC-----HHHHHHHHHHHhhccCCCcEEEECCC
Confidence 886543 33455788999999999998887543
No 390
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=84.52 E-value=1.2 Score=41.95 Aligned_cols=44 Identities=20% Similarity=0.438 Sum_probs=35.5
Q ss_pred CCeeeEeecccchHHHHHHHhc------CCcEEEEeCCHHHHHHHHHhcc
Q 024100 158 HLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLA 201 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~------~~~v~~vD~S~~mld~A~~~l~ 201 (272)
+..|+|+|+|.|.+...+|.-. ..++.+||+|+.+.+.-++.+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 3589999999999999887321 1379999999999888887774
No 391
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=84.39 E-value=3.3 Score=36.90 Aligned_cols=91 Identities=11% Similarity=0.152 Sum_probs=59.7
Q ss_pred CCCeeeEee-cc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-----CCCCC
Q 024100 157 QHLVALDCG-SG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TPETG 229 (272)
Q Consensus 157 ~~~~VLDiG-cG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~ 229 (272)
++.+||=+| +| .|..+..++...+.+|++++.+++-++.+++. .. . .++..+ +++ .....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga--------~---~vi~~~-~~~~~~~~~~~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM-GA--------D---IVLNHK-ESLLNQFKTQGIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH-TC--------S---EEECTT-SCHHHHHHHHTCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CC--------c---EEEECC-ccHHHHHHHhCCC
Confidence 677899884 44 68888888666678999999999988888773 21 1 111111 111 01123
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+|+|+-+-. .. ..+..+.+.|+++|.++..
T Consensus 217 g~Dvv~d~~g------~~--~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 217 LVDYVFCTFN------TD--MYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CEEEEEESSC------HH--HHHHHHHHHEEEEEEEEES
T ss_pred CccEEEECCC------ch--HHHHHHHHHhccCCEEEEE
Confidence 6999886432 12 4678888999999998653
No 392
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=83.87 E-value=3.4 Score=35.00 Aligned_cols=107 Identities=10% Similarity=-0.005 Sum_probs=62.9
Q ss_pred CCeeeEeecc----cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGSG----IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGcG----tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.++|=.|++ .|.-....|++.+.+|.+++.++...+...+..... ...++.++.+|+.+...-
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL------DRNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS------SSCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc------CCCCceEEeCCCCCHHHHHHHHHH
Confidence 4478888855 565333344677889999987765555554443221 123688999999765310
Q ss_pred ----CCcceeeEechhhh----------hcChhhHHH-----------HHHHHHHhcccCcEEEEecC
Q 024100 228 ----TGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 ----~~~fDlIvs~~vl~----------hl~d~~~~~-----------~l~~~~r~LkpgG~liv~E~ 270 (272)
-+..|+++.+-.+. ..+.+++.. +++.+...++++|.||..-|
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 02678888654322 233333332 34455566677888876544
No 393
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=83.40 E-value=3.5 Score=35.02 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=62.5
Q ss_pred CCeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC--------
Q 024100 158 HLVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------- 227 (272)
Q Consensus 158 ~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~-------- 227 (272)
+.++|=.|++. |.-....|++.+.+|.+++.+++-++...+.+ ..++.++.+|+.+...-
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----------GPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCcceEEEccCCCHHHHHHHHHHHH
Confidence 44778778654 33333333577889999999988777766654 23678899998764310
Q ss_pred --CCcceeeEechhh------hhcChhhHHHH-----------HHHHHHhcccCcEEEEecC
Q 024100 228 --TGRYDVIWVQWCI------GHLTDDDFVSF-----------FKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 --~~~fDlIvs~~vl------~hl~d~~~~~~-----------l~~~~r~LkpgG~liv~E~ 270 (272)
-+..|+++.+-.+ ..++.+++... .+.+...++++|.|+..-|
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 1368998865432 23344443332 2334455667888876544
No 394
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=83.40 E-value=5.6 Score=35.78 Aligned_cols=93 Identities=16% Similarity=0.164 Sum_probs=60.3
Q ss_pred CCCeeeEee-c-ccchHHHHHHHh-cCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE---EeCCCCCCCCCCc
Q 024100 157 QHLVALDCG-S-GIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF---CVPLQDFTPETGR 230 (272)
Q Consensus 157 ~~~~VLDiG-c-GtG~~t~~LLa~-~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~---~~d~~~~~~~~~~ 230 (272)
++.+||=+| + |.|..+..++.. .+.+|++++.+++-++.+++ +.. ...++.. ...+.+. ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lGa--------d~vi~~~~~~~~~v~~~--~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LGA--------HHVIDHSKPLAAEVAAL--GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TTC--------SEEECTTSCHHHHHHTT--CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cCC--------CEEEeCCCCHHHHHHHh--cCCC
Confidence 567899998 4 468888888544 37799999999988888876 321 1111100 0001111 2247
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+|+-+-. .. ..+..+.+.|+++|.++..
T Consensus 240 ~Dvvid~~g------~~--~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH------TD--KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC------HH--HHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC------ch--hhHHHHHHHhcCCCEEEEE
Confidence 999886433 12 4778888999999999865
No 395
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.11 E-value=3.5 Score=35.24 Aligned_cols=106 Identities=19% Similarity=0.151 Sum_probs=62.4
Q ss_pred CCeeeEeecc--cchHHHHHHHhcCCcEEEEeCC------------HHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC
Q 024100 158 HLVALDCGSG--IGRITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPLQD 223 (272)
Q Consensus 158 ~~~VLDiGcG--tG~~t~~LLa~~~~~v~~vD~S------------~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~ 223 (272)
+.+||=.|++ .|......|++.+.+|.+++.+ ..-++.+...+.. ...++.++.+|+.+
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-------TGRKAYTAEVDVRD 82 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-------TTSCEEEEECCTTC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh-------cCCceEEEEccCCC
Confidence 4478878875 4443333335778899999876 6666665554432 23578889999876
Q ss_pred CCCC----------CCcceeeEechhhhh----cChhhHHHH-----------HHHHHHhcccCcEEEEecC
Q 024100 224 FTPE----------TGRYDVIWVQWCIGH----LTDDDFVSF-----------FKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 224 ~~~~----------~~~fDlIvs~~vl~h----l~d~~~~~~-----------l~~~~r~LkpgG~liv~E~ 270 (272)
...- -+..|++|.+-.+.. ++.+++... ++.+...++.+|.||..-|
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 4210 026899886644322 333333332 2344455667888776543
No 396
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.11 E-value=0.66 Score=41.64 Aligned_cols=57 Identities=12% Similarity=0.165 Sum_probs=38.0
Q ss_pred CceEEEEeCCCC-CC-CCCCcceeeEechhhhhcC------------hhhHHHHHHHHHHhcccCcEEEEe
Q 024100 212 KATNFFCVPLQD-FT-PETGRYDVIWVQWCIGHLT------------DDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 212 ~~v~~~~~d~~~-~~-~~~~~fDlIvs~~vl~hl~------------d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....++++|..+ +. .++++||+|++.--..... ...+...|++++++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 456788888754 22 3456899999863321110 013557899999999999988764
No 397
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=82.78 E-value=12 Score=33.67 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=69.2
Q ss_pred CCeeeEeecccchHHHHHHHhcCCcEEEEeCC-HHHHHHHHHhccccC-------------CC-CC---CCCCceEEEEe
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPV-SHFLDAARESLAPEN-------------HM-AP---DMHKATNFFCV 219 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S-~~mld~A~~~l~~~~-------------~~-~~---~~~~~v~~~~~ 219 (272)
...|+-+|||.=.....|.......+..+|++ |+.++.=++.+.... .. .. -...+..++.+
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~ 170 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGA 170 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEEC
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcc
Confidence 45899999998877777753323455565533 333433222222100 00 00 01357789999
Q ss_pred CCCCCC----------CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecC
Q 024100 220 PLQDFT----------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 220 d~~~~~----------~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~ 270 (272)
|+.+.. +.....=++++-.++.|++.++...+|+.+.+.. |+|.+++.|.
T Consensus 171 DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~ 230 (334)
T 3iei_A 171 DLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQ 230 (334)
T ss_dssp CTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred ccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEec
Confidence 987621 2223456778889999999998889999999876 5566666664
No 398
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=82.56 E-value=3.3 Score=36.50 Aligned_cols=92 Identities=12% Similarity=0.011 Sum_probs=57.1
Q ss_pred CCCCCeeeEee-c-ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC-CCCCCCcc
Q 024100 155 NNQHLVALDCG-S-GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRY 231 (272)
Q Consensus 155 ~~~~~~VLDiG-c-GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~f 231 (272)
+.++.+||=+| + |.|..+..++...+.+|.+++ ++.-++.+++. . .. .++...-.+ +...-..+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~l-G---------a~--~~i~~~~~~~~~~~~~g~ 216 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKAL-G---------AE--QCINYHEEDFLLAISTPV 216 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHH-T---------CS--EEEETTTSCHHHHCCSCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHc-C---------CC--EEEeCCCcchhhhhccCC
Confidence 56778999987 4 478888888766678898887 44447777653 1 11 122222111 11111469
Q ss_pred eeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 232 DVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 232 DlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+|+-.-.- + .+..+.+.|+++|.++..
T Consensus 217 D~v~d~~g~-----~----~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVGG-----D----VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSCH-----H----HHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCCc-----H----HHHHHHHhccCCCEEEEe
Confidence 998854331 1 236778999999998864
No 399
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.21 E-value=2.7 Score=37.29 Aligned_cols=97 Identities=13% Similarity=-0.044 Sum_probs=58.6
Q ss_pred CCCCCeeeEeecccc-hHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCC-C-C-CCCC
Q 024100 155 NNQHLVALDCGSGIG-RITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-F-T-PETG 229 (272)
Q Consensus 155 ~~~~~~VLDiGcGtG-~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~-~-~-~~~~ 229 (272)
..++.+||=+|+|.+ .++..+++.. +.+|+++|.+++-++.+++.-. ...+++...|+.+ + . ....
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga---------~~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA---------DVTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTC---------SEEEEC-CCCHHHHHHHHTTSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCC---------eEEEeCCCCCHHHHhhhhcCCC
Confidence 457789999999864 4555454433 6799999999988888876421 1223332222211 0 0 0112
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+|.++.... .. ..+....+.|+++|.++..
T Consensus 232 g~d~~~~~~~------~~--~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCAV------AR--IAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECCS------CH--HHHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEecc------Cc--chhheeheeecCCceEEEE
Confidence 4666654332 12 5778888999999998754
No 400
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=80.82 E-value=10 Score=33.30 Aligned_cols=94 Identities=16% Similarity=0.055 Sum_probs=57.8
Q ss_pred CCCCCeeeEeecc-cchHHHHHHHhcCC-cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC------C
Q 024100 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (272)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~t~~LLa~~~~-~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~------~ 226 (272)
..++.+||=.|+| .|.++..++...+. .+.+++.+++-++.+++. . ....+...-.+.. .
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l-G-----------a~~~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF-G-----------AMQTFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-T-----------CSEEEETTTSCHHHHHHHHG
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc-C-----------CeEEEeCCCCCHHHHHHhhc
Confidence 4577899999987 45666666544554 457899999988888763 1 1122221111110 0
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
....+|+|+-.-. .. ..++.+.+.|++||.++..
T Consensus 226 ~~~g~d~v~d~~G------~~--~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 226 ELRFNQLILETAG------VP--QTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp GGCSSEEEEECSC------SH--HHHHHHHHHCCTTCEEEEC
T ss_pred ccCCccccccccc------cc--chhhhhhheecCCeEEEEE
Confidence 1235787764432 12 4677888999999998754
No 401
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=80.74 E-value=1.5 Score=43.20 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=62.3
Q ss_pred CCCeeeEeecccchHHHHHHHhc--C-----------CcEEEEeC---CHHHHHHHHHhccc-----------cCC----
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY--F-----------NEVDLLEP---VSHFLDAARESLAP-----------ENH---- 205 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~--~-----------~~v~~vD~---S~~mld~A~~~l~~-----------~~~---- 205 (272)
+.-+|+|+|-|+|.....++... + -+++.+|. +..-+..|-+.... ...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34699999999999888665321 1 24577786 55555543322110 000
Q ss_pred ----CCCCCCCceEEEEeCCCCCCC--C---CCcceeeEechhhhhcChhh--HHHHHHHHHHhcccCcEEE
Q 024100 206 ----MAPDMHKATNFFCVPLQDFTP--E---TGRYDVIWVQWCIGHLTDDD--FVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 206 ----~~~~~~~~v~~~~~d~~~~~~--~---~~~fDlIvs~~vl~hl~d~~--~~~~l~~~~r~LkpgG~li 266 (272)
.-....-.++++.+|+.+.-+ . .+.+|.|+.-..--.- +++ -..+|+.+.++++|||.+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-NPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-ChhhhhHHHHHHHHHHhCCCCEEE
Confidence 000112356777888754321 1 3579999874321111 111 1379999999999999875
No 402
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=79.78 E-value=8.7 Score=34.98 Aligned_cols=98 Identities=10% Similarity=0.029 Sum_probs=62.3
Q ss_pred CCCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
...+||.+|.+.|.++..| +.. .++.+..|--.-...+.++..-+ -....+++.. .+++. ++.||+|+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~-~~~--~~~~~~ds~~~~~~~~~n~~~~~----~~~~~~~~~~-~~~~~---~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCAL-AEH--KPYSIGDSYISELATRENLRLNG----IDESSVKFLD-STADY---PQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHT-GGG--CCEEEESCHHHHHHHHHHHHHTT----CCGGGSEEEE-TTSCC---CSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhh-ccC--CceEEEhHHHHHHHHHHHHHHcC----CCccceEecc-ccccc---ccCCCEEEE
Confidence 3468999999999999877 443 44555545544445555553310 1122456543 23322 357999988
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+.= + -.++...|..+...|+||+.+++.
T Consensus 107 ~lpk-~--~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 107 KVPK-T--LALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp ECCS-C--HHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred EcCC-C--HHHHHHHHHHHHhhCCCCCEEEEE
Confidence 6552 2 145668899999999999988754
No 403
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=79.13 E-value=0.35 Score=39.60 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=24.0
Q ss_pred CCCeeeEeecccchHHHHHHHhcCC--cEEEEe
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLE 187 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~~--~v~~vD 187 (272)
-.+-|||+|-|.|+.--+| ...++ ++.++|
T Consensus 40 ~~GpVlElGLGNGRTydHL-Re~~P~R~I~vfD 71 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHL-RQHVQGREIYVFE 71 (174)
T ss_dssp CCSCEEEECCTTCHHHHHH-HHHCCSSCEEEEE
T ss_pred CCCceEEecCCCChhHHHH-HHhCCCCcEEEEE
Confidence 4568999999999999988 56655 667776
No 404
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=78.25 E-value=18 Score=30.89 Aligned_cols=98 Identities=15% Similarity=0.126 Sum_probs=54.8
Q ss_pred eeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCC----ceEEEEeCCCCCCCCCCcceee
Q 024100 160 VALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK----ATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 160 ~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~----~v~~~~~d~~~~~~~~~~fDlI 234 (272)
+|.=||+| .|......|++.+.+|+++|.+++-++..++.-... ..... ++.+ .+..+....-..+|+|
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~d~v 78 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIA----DFNGEEVVANLPI--FSPEEIDHQNEQVDLI 78 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEE----EETTEEEEECCCE--ECGGGCCTTSCCCSEE
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEE----EeCCCeeEeccee--ecchhhcccCCCCCEE
Confidence 68888987 343333333566779999999988777765531000 00000 0010 0111111000268998
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+..--- .....+++++...++|+..++..
T Consensus 79 i~~v~~-----~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 79 IALTKA-----QQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp EECSCH-----HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEEecc-----ccHHHHHHHHHHhcCCCCEEEEe
Confidence 875432 23457888888889888877754
No 405
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=77.59 E-value=2.9 Score=41.04 Aligned_cols=109 Identities=13% Similarity=0.111 Sum_probs=62.6
Q ss_pred CCCeeeEeecccchHHHHHHHhc-----------CC--cEEEEeC---CHHHHHHHHHhccc-----------cCCCC--
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-----------FN--EVDLLEP---VSHFLDAARESLAP-----------ENHMA-- 207 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-----------~~--~v~~vD~---S~~mld~A~~~l~~-----------~~~~~-- 207 (272)
+.-+|||+|-|+|......+... .. +++.+|. +.+.+..+-+.... .....
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34599999999998887664321 11 3677886 77777644332111 00000
Q ss_pred ------CCCCCceEEEEeCCCCCCC-----CCCcceeeEechhhhhcChhh--HHHHHHHHHHhcccCcEEE
Q 024100 208 ------PDMHKATNFFCVPLQDFTP-----ETGRYDVIWVQWCIGHLTDDD--FVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 208 ------~~~~~~v~~~~~d~~~~~~-----~~~~fDlIvs~~vl~hl~d~~--~~~~l~~~~r~LkpgG~li 266 (272)
......++++.+|+.+.-+ ....||+|+.-..--. .+++ -..+|+.+.+.++|||.+.
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~-~np~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPA-KNPDMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGG-GCGGGSCHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCc-CChhhhhHHHHHHHHHHhCCCCEEE
Confidence 0011345566677654211 1357999986431111 1222 1379999999999999875
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=77.37 E-value=14 Score=31.59 Aligned_cols=89 Identities=12% Similarity=0.012 Sum_probs=52.7
Q ss_pred eeeEeeccc-chHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCC-cceeeE
Q 024100 160 VALDCGSGI-GRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-RYDVIW 235 (272)
Q Consensus 160 ~VLDiGcGt-G~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~fDlIv 235 (272)
+|.=||+|. |......+.+.+. +|.++|.+++-++.+++. . . ... ...+..+. -. ..|+|+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g---------~-~~~-~~~~~~~~---~~~~aDvVi 67 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-G---------I-IDE-GTTSIAKV---EDFSPDFVM 67 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-T---------S-CSE-EESCGGGG---GGTCCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-C---------C-ccc-ccCCHHHH---hcCCCCEEE
Confidence 566778773 4333333345555 899999999887776542 1 0 001 11222221 13 578888
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..-- ......++.++...++++..+++.
T Consensus 68 lavp-----~~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 68 LSSP-----VRTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp ECSC-----HHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred EcCC-----HHHHHHHHHHHHhhCCCCcEEEEC
Confidence 6533 233457888888889998877764
No 407
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=76.95 E-value=10 Score=32.15 Aligned_cols=89 Identities=11% Similarity=0.122 Sum_probs=54.4
Q ss_pred CeeeEeecc-cchHHHHHHHhcCCc-EEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 159 LVALDCGSG-IGRITKNLLIRYFNE-VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 159 ~~VLDiGcG-tG~~t~~LLa~~~~~-v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
.+|.=|||| .|......+.+.+.+ |.++|.+++-++...+.+. +.+ ..+.++.- ...|+|+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g------------~~~-~~~~~~~~---~~~Dvvi~ 74 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE------------AEY-TTDLAEVN---PYAKLYIV 74 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT------------CEE-ESCGGGSC---SCCSEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC------------Cce-eCCHHHHh---cCCCEEEE
Confidence 468888987 343332233455556 8999999987777665431 222 22332221 25898886
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.-. +.....+++++...+++|..+++.
T Consensus 75 av~-----~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 75 SLK-----DSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp CCC-----HHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred ecC-----HHHHHHHHHHHHhhcCCCcEEEEC
Confidence 543 233457888888888888877765
No 408
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=75.62 E-value=5.6 Score=34.76 Aligned_cols=88 Identities=11% Similarity=-0.013 Sum_probs=51.6
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE-eCCCCCCCCCCcceee
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~fDlI 234 (272)
.+.+|+=+|+| .|......+...+.+|.++|.++.-.+.+.+ + .+.+.. .++.+. -...|+|
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~------------g~~~~~~~~l~~~---l~~aDvV 217 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-M------------GMEPFHISKAAQE---LRDVDVC 217 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T------------TSEEEEGGGHHHH---TTTCSEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-C------------CCeecChhhHHHH---hcCCCEE
Confidence 45689999987 4544444444556799999999865544432 2 112221 122111 1368999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+.+-..+.+ +.+ ..+.++||+.+++.
T Consensus 218 i~~~p~~~i-~~~-------~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 218 INTIPALVV-TAN-------VLAEMPSHTFVIDL 243 (293)
T ss_dssp EECCSSCCB-CHH-------HHHHSCTTCEEEEC
T ss_pred EECCChHHh-CHH-------HHHhcCCCCEEEEe
Confidence 977655333 222 23467999988865
No 409
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=75.58 E-value=14 Score=31.49 Aligned_cols=88 Identities=11% Similarity=-0.016 Sum_probs=53.3
Q ss_pred eeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEech
Q 024100 160 VALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQW 238 (272)
Q Consensus 160 ~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~~ 238 (272)
+|.=||||. |......+.+.+.+|.++|.+++-++.+.+. . . ... ...+..+. ...|+|+..-
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g---------~-~~~-~~~~~~~~----~~~D~vi~av 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER-Q---------L-VDE-AGQDLSLL----QTAKIIFLCT 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-T---------S-CSE-EESCGGGG----TTCSEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC-C---------C-Ccc-ccCCHHHh----CCCCEEEEEC
Confidence 466678873 3332223345666899999999877766532 1 1 001 12233322 3589988754
Q ss_pred hhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 239 CIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 239 vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
-- .....+++++...++|+..+++.
T Consensus 66 ~~-----~~~~~~~~~l~~~~~~~~~vv~~ 90 (279)
T 2f1k_A 66 PI-----QLILPTLEKLIPHLSPTAIVTDV 90 (279)
T ss_dssp CH-----HHHHHHHHHHGGGSCTTCEEEEC
T ss_pred CH-----HHHHHHHHHHHhhCCCCCEEEEC
Confidence 32 34557888888888888877764
No 410
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=75.19 E-value=9.4 Score=37.57 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=69.9
Q ss_pred CCeeeEeecccchHHHHHHHhcCC--------cEEEEeCC-HHHHHHHHHhccccC-------------CCC-----CCC
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFN--------EVDLLEPV-SHFLDAARESLAPEN-------------HMA-----PDM 210 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~--------~v~~vD~S-~~mld~A~~~l~~~~-------------~~~-----~~~ 210 (272)
..-|+-+|||-=.....|. ...+ .+..+|++ |+.++.=++.+.... ... ...
T Consensus 108 ~~qvV~LGaGlDtr~~Rl~-~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 108 KIVVVNLGCGYDPLPFQLL-DTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp EEEEEEETCTTCCHHHHHH-CTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CcEEEEcccccCcceeeee-ccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 4579999999888887784 4322 67777744 333333333332100 000 000
Q ss_pred CCceEEEEeCCCCCC----------C-CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEecCC
Q 024100 211 HKATNFFCVPLQDFT----------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSHSL 271 (272)
Q Consensus 211 ~~~v~~~~~d~~~~~----------~-~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E~~ 271 (272)
..+..++.+|+.+.. + .....=++++-.+|.||+.++..++|+.+.+ + |+|.++..|.+
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~ 256 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQL 256 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEEC
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEee
Confidence 137789999997631 1 2234456778899999999988899999885 4 68888776643
No 411
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=74.20 E-value=12 Score=31.10 Aligned_cols=74 Identities=18% Similarity=0.113 Sum_probs=49.0
Q ss_pred CCeeeEeecccc---hHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG---~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
+.+||=.|++.| .++..| ++.+.+|.+++.++.-++...+.+.. ....+.++.+|+.+...-
T Consensus 9 ~k~vlITGas~giG~~~a~~l-~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEAL-AREGAAVVVADINAEAAEAVAKQIVA-------DGGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHH-HHCCCEEEEEcCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 447887886543 334444 56788999999998888777666532 235788889998764210
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
-+..|+++.+-.
T Consensus 81 ~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 026899987643
No 412
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=73.15 E-value=1 Score=41.79 Aligned_cols=42 Identities=17% Similarity=0.080 Sum_probs=33.4
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHH
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~ 198 (272)
++.+|+=+|+| .|..+..++...+.+|+++|.++.-++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56799999998 5666666666678899999999987777765
No 413
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=73.15 E-value=13 Score=33.47 Aligned_cols=92 Identities=12% Similarity=0.018 Sum_probs=58.0
Q ss_pred CCCCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC-----CCC
Q 024100 156 NQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PET 228 (272)
Q Consensus 156 ~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~-----~~~ 228 (272)
.++.+||=+|+ |.|..+..++...+.+|.++. |+.-++.+++. . .-.++...-.++. ..+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~l-G-----------a~~vi~~~~~~~~~~v~~~t~ 229 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSR-G-----------AEEVFDYRAPNLAQTIRTYTK 229 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT-T-----------CSEEEETTSTTHHHHHHHHTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHc-C-----------CcEEEECCCchHHHHHHHHcc
Confidence 56778999998 389999988766677888885 77777777653 1 1122222111110 112
Q ss_pred CcceeeEechhhhhcChhhHHHHHHHHHHhc-ccCcEEEEe
Q 024100 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKENI-ARSGTFLLS 268 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~L-kpgG~liv~ 268 (272)
+.+|+|+-.-. .+ ..+..+.+.| ++||.++..
T Consensus 230 g~~d~v~d~~g-----~~---~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 230 NNLRYALDCIT-----NV---ESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp TCCCEEEESSC-----SH---HHHHHHHHHSCTTCEEEEES
T ss_pred CCccEEEECCC-----ch---HHHHHHHHHhhcCCCEEEEE
Confidence 35999885433 12 4677778888 699998764
No 414
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=73.01 E-value=6.3 Score=34.52 Aligned_cols=88 Identities=14% Similarity=0.023 Sum_probs=52.2
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEE-eCCCCCCCCCCcceee
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~fDlI 234 (272)
.+.+|+=+|+| .|......+...+.+|.++|.++.-.+.+.+ + .+..+. .++.+. -...|+|
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~------------g~~~~~~~~l~~~---l~~aDvV 219 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-M------------GLVPFHTDELKEH---VKDIDIC 219 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T------------TCEEEEGGGHHHH---STTCSEE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-C------------CCeEEchhhHHHH---hhCCCEE
Confidence 45689999987 4444444444566799999999865444332 1 112221 122221 1368999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+.+-..+.+ +.+ ....++||+.+++.
T Consensus 220 i~~~p~~~i-~~~-------~~~~mk~g~~lin~ 245 (300)
T 2rir_A 220 INTIPSMIL-NQT-------VLSSMTPKTLILDL 245 (300)
T ss_dssp EECCSSCCB-CHH-------HHTTSCTTCEEEEC
T ss_pred EECCChhhh-CHH-------HHHhCCCCCEEEEE
Confidence 987666433 222 24678999988864
No 415
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=72.97 E-value=13 Score=31.40 Aligned_cols=74 Identities=20% Similarity=0.126 Sum_probs=48.4
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
+.+||=.|++.| . ++..| ++.+.+|.+++-++.-++...+.+.. ....+.++.+|+.+...-
T Consensus 29 ~k~vlITGas~gIG~~la~~l-~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKL-GSLGARVVLTARDVEKLRAVEREIVA-------AGGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHH-HHCCCEEEEEECCHHHHHHHHHHHHH-------hCCceeEEEecCCCHHHHHHHHHHH
Confidence 447887886543 2 33333 46688999999998877777666532 235788999998764310
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
-++.|+++.+-.
T Consensus 101 ~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 035899886544
No 416
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=72.84 E-value=1.6 Score=40.00 Aligned_cols=42 Identities=14% Similarity=-0.024 Sum_probs=31.4
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHH
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~ 198 (272)
++.+|+=+|+| .|..+..++...+.+|+++|.++.-++.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56799999988 5666666655567789999988876666655
No 417
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=72.77 E-value=27 Score=29.59 Aligned_cols=76 Identities=21% Similarity=0.106 Sum_probs=50.2
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC-CC-------
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP------- 226 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~-~~------- 226 (272)
+.+||=.|++.| . ++..| ++.+.+|.+++-++.-++.+.+.+... ...++.++.+|+.+. ..
T Consensus 12 ~k~vlITGas~GIG~~~a~~L-~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQL-SSNGIMVVLTCRDVTKGHEAVEKLKNS------NHENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHTT------TCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHHHHHhc------CCCceEEEEccCCCcHHHHHHHHHH
Confidence 447787786543 3 33434 567889999999888777766665321 234789999999775 21
Q ss_pred ---CCCcceeeEechhh
Q 024100 227 ---ETGRYDVIWVQWCI 240 (272)
Q Consensus 227 ---~~~~fDlIvs~~vl 240 (272)
..+..|++|.+-.+
T Consensus 85 ~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 85 IKTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHHSSCCEEEECCCC
T ss_pred HHHhCCCCCEEEECCcc
Confidence 01368999976543
No 418
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=72.68 E-value=1.2 Score=40.25 Aligned_cols=94 Identities=12% Similarity=0.067 Sum_probs=56.2
Q ss_pred CCCCCeeeEee--cccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC---CCCC
Q 024100 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (272)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~---~~~~ 229 (272)
..++.+||=.| .|.|..+..++...+.+|.+++ ++.-++.+++ +. .. ..+..+-.++. ....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~-lG---------a~--~v~~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK-LG---------AD--DVIDYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH-TT---------CS--EEEETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH-cC---------CC--EEEECCchHHHHHHhhcC
Confidence 45678999998 3578888888766677898888 6666676644 21 11 11211111110 0113
Q ss_pred cceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 230 ~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.+|+|+-+-.- +. ..+....+.|++||.++..
T Consensus 248 g~D~vid~~g~-----~~--~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 248 PFDFILDNVGG-----ST--ETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CBSEEEESSCT-----TH--HHHGGGGBCSSSCCEEEES
T ss_pred CCCEEEECCCC-----hh--hhhHHHHHhhcCCcEEEEe
Confidence 69998854331 21 2445567789999998754
No 419
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=72.37 E-value=16 Score=34.20 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=58.3
Q ss_pred CeeeEeeccc-ch-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhcccc-------C-CCC-CCCCCceEEEEeCCCCCCCC
Q 024100 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE-------N-HMA-PDMHKATNFFCVPLQDFTPE 227 (272)
Q Consensus 159 ~~VLDiGcGt-G~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~-------~-~~~-~~~~~~v~~~~~d~~~~~~~ 227 (272)
.+|.=||+|. |. ++. .+++.+.+|+++|.+++.++.+++.+... . ... ........+ ..|.+.+
T Consensus 38 ~kV~VIGaG~MG~~iA~-~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~--- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAI-SFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHH-HHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG---
T ss_pred CEEEEECcCHHHHHHHH-HHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH---
Confidence 4788899996 43 444 34577889999999999888776532100 0 000 000111222 3343221
Q ss_pred CCcceeeEechhhhhcChh-hHHHHHHHHHHhcccCcEEEE
Q 024100 228 TGRYDVIWVQWCIGHLTDD-DFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 228 ~~~fDlIvs~~vl~hl~d~-~~~~~l~~~~r~LkpgG~liv 267 (272)
...|+|+..-. .+. -...+++++...++|+..|+.
T Consensus 113 -~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 -STVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -TTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 35788886542 122 234788999999988877764
No 420
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=72.28 E-value=3.6 Score=42.81 Aligned_cols=44 Identities=20% Similarity=0.120 Sum_probs=35.9
Q ss_pred CCCeeeEeecccchHHHHHHHhcC--CcEEEEeCCHHHHHHHHHhcc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLA 201 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~ 201 (272)
...+++|+=||.|.++..| .+.+ ..+.++|.++..++.-+.+..
T Consensus 539 ~~l~~iDLFaG~GGlslGl-~~AG~~~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGF-HQAGISDTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHH-HHHTSEEEEEEECSSHHHHHHHHHHCT
T ss_pred CCCeEEEeccCccHHHHHH-HHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 4568999999999999988 4554 356799999999998888763
No 421
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=72.15 E-value=3.9 Score=38.16 Aligned_cols=42 Identities=12% Similarity=-0.015 Sum_probs=33.6
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHH
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~ 198 (272)
++.+|+=+|+| .|..+..++...+.+|+++|.++.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 56799999998 5666666666678899999999987777766
No 422
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=72.15 E-value=21 Score=29.98 Aligned_cols=75 Identities=12% Similarity=-0.026 Sum_probs=46.2
Q ss_pred CCeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----C---
Q 024100 158 HLVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E--- 227 (272)
Q Consensus 158 ~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~--- 227 (272)
+.++|=.|++. |......|++.+.+|.+++-++.-++...+.+.. ....+.++.+|+.+... .
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-------KGFKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 34677777643 3332223356788999999888776665554422 13467888899876421 0
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
.+..|+++.+-.
T Consensus 82 ~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 82 NHFHGKLNILVNNAG 96 (260)
T ss_dssp HHTTTCCCEEEECCC
T ss_pred HHcCCCCCEEEECCC
Confidence 046899986644
No 423
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=72.02 E-value=6.5 Score=37.55 Aligned_cols=88 Identities=13% Similarity=0.014 Sum_probs=53.7
Q ss_pred CCCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 156 ~~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.++.+|+=+|+| .|......+...+.+|.++|+++.-++.|.+. . .++ .++++. - ...|+|
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~-G------------a~~--~~l~e~--l-~~aDvV 333 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMME-G------------FDV--VTVEEA--I-GDADIV 333 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-T------------CEE--CCHHHH--G-GGCSEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C------------CEE--ecHHHH--H-hCCCEE
Confidence 456789999987 55555555545677999999999877766542 1 111 122221 1 368998
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+..-.-.++-+ .+..+.+++||+++..
T Consensus 334 i~atgt~~~i~-------~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 334 VTATGNKDIIM-------LEHIKAMKDHAILGNI 360 (494)
T ss_dssp EECSSSSCSBC-------HHHHHHSCTTCEEEEC
T ss_pred EECCCCHHHHH-------HHHHHhcCCCcEEEEe
Confidence 87532222111 2455668999998764
No 424
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=71.91 E-value=8.8 Score=33.29 Aligned_cols=105 Identities=11% Similarity=0.022 Sum_probs=60.5
Q ss_pred CCeeeEeec----ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGS----GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGc----GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.++|=.|+ |.|+-....|++.+.+|.+++.++...+...+.... ...+.++.+|+.+...-
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES--------LGVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------HTCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh--------cCCeEEEEcCCCCHHHHHHHHHH
Confidence 457888886 566543334467888999999886544444433321 12357888998664210
Q ss_pred ----CCcceeeEechhhh----------hcChhhHHHH-----------HHHHHHhcccCcEEEEecC
Q 024100 228 ----TGRYDVIWVQWCIG----------HLTDDDFVSF-----------FKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 ----~~~fDlIvs~~vl~----------hl~d~~~~~~-----------l~~~~r~LkpgG~liv~E~ 270 (272)
-+..|++|.+-.+. ..+.+++... ++.+...++.+|.||..-|
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 03689998664332 2333333332 2334455667888876543
No 425
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=71.58 E-value=13 Score=32.45 Aligned_cols=90 Identities=9% Similarity=-0.029 Sum_probs=52.4
Q ss_pred CeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEec
Q 024100 159 LVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (272)
Q Consensus 159 ~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~ 237 (272)
.+|.=||+| .|......+++.+.+|.++|.+++-++...+.- ......+..+.- ...|+|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------------~~~~~~~~~e~~---~~aDvvi~~ 71 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEG-------------ACGAAASAREFA---GVVDALVIL 71 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------------CSEEESSSTTTT---TTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC-------------CccccCCHHHHH---hcCCEEEEE
Confidence 468888887 343322233567789999999998777765430 111233443331 357888765
Q ss_pred hhhhhcChhhHHHHH---HHHHHhcccCcEEEEe
Q 024100 238 WCIGHLTDDDFVSFF---KRAKENIARSGTFLLS 268 (272)
Q Consensus 238 ~vl~hl~d~~~~~~l---~~~~r~LkpgG~liv~ 268 (272)
-.- +.....++ +.+...++||..+++.
T Consensus 72 vp~----~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 72 VVN----AAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp CSS----HHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred CCC----HHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 331 12233444 5566777888777754
No 426
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=71.53 E-value=18 Score=32.67 Aligned_cols=102 Identities=15% Similarity=0.070 Sum_probs=59.3
Q ss_pred CCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCC-CCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMA-PDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 158 ~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
..+|.=||+| .|......|++.+.+|.+++.+++-++..++.-....... -....++.+. .|+.+. -...|+|+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea---~~~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS---LEGVTDIL 104 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH---HTTCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH---HhcCCEEE
Confidence 4578889998 4543333446778899999999888777765421100000 0001122221 122111 12578888
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..- +...+..+++++...++|+-.++..
T Consensus 105 laV-----p~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 105 IVV-----PSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp ECC-----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred ECC-----CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 653 3345668899999999988877653
No 427
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=71.21 E-value=12 Score=31.02 Aligned_cols=88 Identities=15% Similarity=0.016 Sum_probs=53.9
Q ss_pred CCeeeEeecccchHHHHHHH---hcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC----CCCCc
Q 024100 158 HLVALDCGSGIGRITKNLLI---RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa---~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~ 230 (272)
..+++=+|+ |.++..++. ..+. |+++|.++..++.++ . .+.++.+|..+.. ..-..
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~------------~~~~i~gd~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--S------------GANFVHGDPTRVSDLEKANVRG 71 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--T------------TCEEEESCTTCHHHHHHTTCTT
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--c------------CCeEEEcCCCCHHHHHhcCcch
Confidence 347888887 466655532 2344 999999888776554 1 3577888876432 11246
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
.|+|++.. ++++.........+.+.|+..++.
T Consensus 72 ad~vi~~~-----~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 72 ARAVIVDL-----ESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp CSEEEECC-----SCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred hcEEEEcC-----CCcHHHHHHHHHHHHHCCCCeEEE
Confidence 88888653 234444455566667788766654
No 428
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=71.19 E-value=7.8 Score=32.58 Aligned_cols=107 Identities=17% Similarity=0.012 Sum_probs=60.9
Q ss_pred CCCCeeeEeec----ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC----
Q 024100 156 NQHLVALDCGS----GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---- 227 (272)
Q Consensus 156 ~~~~~VLDiGc----GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~---- 227 (272)
.++.+||=.|+ |.|.-....|++.+.+|.+++.+....+..++.... ...+.++.+|+.+...-
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~ 83 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE--------FGSELVFPCDVADDAQIDALF 83 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------TTCCCEEECCTTCHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH--------cCCcEEEECCCCCHHHHHHHH
Confidence 35668888885 455443334457788999998775544444433221 12477889998664210
Q ss_pred ------CCcceeeEechhhhh-----------cChhhHHHH-----------HHHHHHhcccCcEEEEecC
Q 024100 228 ------TGRYDVIWVQWCIGH-----------LTDDDFVSF-----------FKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 ------~~~fDlIvs~~vl~h-----------l~d~~~~~~-----------l~~~~r~LkpgG~liv~E~ 270 (272)
-++.|++|.+-.+.+ ++.+++... ++.+...++++|.|+..-|
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 136899996644322 333333332 3334455666787776543
No 429
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=70.94 E-value=16 Score=30.75 Aligned_cols=71 Identities=17% Similarity=0.106 Sum_probs=46.3
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
+.++|=.|++.| . ++..| ++.+.+|.+++.++.-++...+.+. ..+.++.+|+.+...-
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l-~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~ 76 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAY-VREGATVAIADIDIERARQAAAEIG----------PAAYAVQMDVTRQDSIDAAIAAT 76 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHHHhC----------CCceEEEeeCCCHHHHHHHHHHH
Confidence 346787786533 3 33434 5678899999998887776666552 3578888998664210
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
-+..|+++.+-.
T Consensus 77 ~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 77 VEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHSSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 126899886543
No 430
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=70.85 E-value=20 Score=32.73 Aligned_cols=93 Identities=18% Similarity=0.172 Sum_probs=59.0
Q ss_pred CCeeeEeecccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEec
Q 024100 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~ 237 (272)
..+||.++-+.|.++..+ +. ..++..+..|....+..+.+ .. ...+ .......+..||+|+..
T Consensus 46 ~~~~l~~n~~~g~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~----------~~-~~~~----~~~~~~~~~~~d~v~~~ 108 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPL-EG-RMAVERLETSRAAFRCLTAS----------GL-QARL----ALPWEAAAGAYDLVVLA 108 (381)
T ss_dssp SSEEEESSCTTSTTTGGG-BT-TBEEEEEECBHHHHHHHHHT----------TC-CCEE----CCGGGSCTTCEEEEEEE
T ss_pred CCcEEEecCCCCcccccc-CC-CCceEEEeCcHHHHHHHHHc----------CC-Cccc----cCCccCCcCCCCEEEEE
Confidence 368999999999877755 22 25788887777655554332 11 1121 11122234689999876
Q ss_pred hhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 238 WCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 238 ~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+-=+ =.....+..|.++.+.|+|||.|++.
T Consensus 109 ~Pk~-k~~~~~~~~l~~~~~~l~~g~~i~~~ 138 (381)
T 3dmg_A 109 LPAG-RGTAYVQASLVAAARALRMGGRLYLA 138 (381)
T ss_dssp CCGG-GCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcc-hhHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 6521 01134568999999999999998653
No 431
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=70.60 E-value=13 Score=32.21 Aligned_cols=74 Identities=15% Similarity=0.085 Sum_probs=49.6
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
+.+||=.|++.| . ++..| ++.+.+|.+++-++.-++...+.+.. ...++.++.+|+.+...-
T Consensus 31 gk~vlVTGas~gIG~~la~~l-~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEF-ARRGARLVLSDVDQPALEQAVNGLRG-------QGFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHH-HHCCCEEEEEECCHHHHHHHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHHH
Confidence 457888887644 3 33434 56788999999998888777766632 234688999999764310
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
-+..|++|.+-.
T Consensus 103 ~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHSSCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 026899886644
No 432
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=70.58 E-value=17 Score=30.52 Aligned_cols=72 Identities=13% Similarity=-0.006 Sum_probs=44.4
Q ss_pred CCeeeEeecc--cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC--------
Q 024100 158 HLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------- 227 (272)
Q Consensus 158 ~~~VLDiGcG--tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~-------- 227 (272)
+.++|=.|++ .|......|++.+.+|.+++.+++-++...+.+ ...+.++.+|+.+...-
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------GDAARYQHLDVTIEEDWQRVVAYAR 74 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCceeEEEecCCCHHHHHHHHHHHH
Confidence 3467777764 443333333567889999998887665554433 23577888888654210
Q ss_pred --CCcceeeEechh
Q 024100 228 --TGRYDVIWVQWC 239 (272)
Q Consensus 228 --~~~fDlIvs~~v 239 (272)
-+..|+++.+-.
T Consensus 75 ~~~g~iD~lv~nAg 88 (254)
T 1hdc_A 75 EEFGSVDGLVNNAG 88 (254)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 026899886543
No 433
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=70.37 E-value=23 Score=30.15 Aligned_cols=75 Identities=17% Similarity=0.136 Sum_probs=46.9
Q ss_pred CCeeeEeeccc--chHHHHHHHhcCCcEEEEeCC----------------HHHHHHHHHhccccCCCCCCCCCceEEEEe
Q 024100 158 HLVALDCGSGI--GRITKNLLIRYFNEVDLLEPV----------------SHFLDAARESLAPENHMAPDMHKATNFFCV 219 (272)
Q Consensus 158 ~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S----------------~~mld~A~~~l~~~~~~~~~~~~~v~~~~~ 219 (272)
+.++|=.|++. |.-....|++.+.+|.++|.+ ++-++...+.+.. ....+.++.+
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 83 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-------HNRRIVTAEV 83 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-------TTCCEEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-------cCCceEEEEc
Confidence 45788888754 433333335778899999876 5556655554432 2357888999
Q ss_pred CCCCCCCC----------CCcceeeEechh
Q 024100 220 PLQDFTPE----------TGRYDVIWVQWC 239 (272)
Q Consensus 220 d~~~~~~~----------~~~fDlIvs~~v 239 (272)
|+.+...- -+..|++|.+-.
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 98764210 036899886543
No 434
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=70.29 E-value=18 Score=31.19 Aligned_cols=105 Identities=13% Similarity=0.026 Sum_probs=62.3
Q ss_pred CCeeeEeecc----cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGSG----IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGcG----tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.++|=.|++ .|.-....|++.+.+|.+++.++...+.+++.... ...+.++.+|+.+...-
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE--------LGAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH--------HTCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--------cCCceEEECCCCCHHHHHHHHHH
Confidence 4578888865 56544444467888999999887655554443321 13577889998664210
Q ss_pred ----CCcceeeEechhhh----------hcChhhHHH-----------HHHHHHHhcccCcEEEEecC
Q 024100 228 ----TGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 ----~~~fDlIvs~~vl~----------hl~d~~~~~-----------~l~~~~r~LkpgG~liv~E~ 270 (272)
-++.|++|.+-.+. ..+.+++.. +++.+...++++|.||..-|
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 13689998654332 233333332 33444566677888876543
No 435
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=70.11 E-value=26 Score=30.66 Aligned_cols=96 Identities=18% Similarity=0.075 Sum_probs=57.1
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE-----EeCCCCCCCCCCc
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-----CVPLQDFTPETGR 230 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~-----~~d~~~~~~~~~~ 230 (272)
...+|.=||+| .|......|++.+.+|+++ .+++.++..++.-.... .+...+. ..+.+. ...
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~------~~~~~~~~~~~~~~~~~~----~~~ 86 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLE------TQSFDEQVKVSASSDPSA----VQG 86 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEE------CSSCEEEECCEEESCGGG----GTT
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEE------cCCCcEEEeeeeeCCHHH----cCC
Confidence 34589999998 4544444446778899999 88888877765410000 0111111 112211 136
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+|+..--- .+...+++.+...++|+..++..
T Consensus 87 ~D~vilavk~-----~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 87 ADLVLFCVKS-----TDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp CSEEEECCCG-----GGHHHHHHHHTTTSCTTCEEEEE
T ss_pred CCEEEEEccc-----ccHHHHHHHHHHhcCCCCEEEEe
Confidence 8998865432 23557899999999998877654
No 436
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=69.67 E-value=24 Score=29.90 Aligned_cols=66 Identities=9% Similarity=-0.013 Sum_probs=39.7
Q ss_pred CCCeeeEeeccc-chHHHHHHHhcCCcEEEEeCC--HHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPV--SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 157 ~~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S--~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.+.+||=+|+|. |.--..+|.+.+..|+++++. +.+.+.+.+ ..+.++..++..-.. ..+|+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~-------------~~i~~i~~~~~~~dL--~~adL 94 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAK-------------GQLRVKRKKVGEEDL--LNVFF 94 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHT-------------TSCEEECSCCCGGGS--SSCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHc-------------CCcEEEECCCCHhHh--CCCCE
Confidence 456899999984 333333445778899999743 443333321 246666655543322 36899
Q ss_pred eEec
Q 024100 234 IWVQ 237 (272)
Q Consensus 234 Ivs~ 237 (272)
|++.
T Consensus 95 VIaA 98 (223)
T 3dfz_A 95 IVVA 98 (223)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9875
No 437
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=69.58 E-value=14 Score=31.64 Aligned_cols=72 Identities=19% Similarity=0.097 Sum_probs=47.2
Q ss_pred CCeeeEeeccc--ch-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 158 HLVALDCGSGI--GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 158 ~~~VLDiGcGt--G~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
+.++|=.|++. |. ++..| ++.+.+|.+++.++.-++...+.+ ...+.++.+|+.+...-
T Consensus 29 gk~vlVTGas~gIG~aia~~l-a~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~ 97 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRL-ADEGCHVLCADIDGDAADAAATKI----------GCGAAACRVDVSDEQQIIAMVDAC 97 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHH-HHTTCEEEEEESSHHHHHHHHHHH----------CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHHHc----------CCcceEEEecCCCHHHHHHHHHHH
Confidence 34677777654 43 34434 577889999999988777666655 23577888898764210
Q ss_pred ---CCcceeeEechhh
Q 024100 228 ---TGRYDVIWVQWCI 240 (272)
Q Consensus 228 ---~~~fDlIvs~~vl 240 (272)
-+..|+++.+-.+
T Consensus 98 ~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 98 VAAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 0268998866443
No 438
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=69.21 E-value=8.8 Score=32.49 Aligned_cols=73 Identities=11% Similarity=0.015 Sum_probs=45.0
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEE-eCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~v-D~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.++|=.|++.| . ++..| ++.+.+|.++ +.++...+...+.+.. ....+.++.+|+.+...-
T Consensus 8 ~k~vlVTGas~GIG~aia~~l-a~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRF-AQEGANVVLTYNGAAEGAATAVAEIEK-------LGRSALAIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEECSSCHHHHHHHHHHHT-------TTSCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHHH
Confidence 447787786544 3 33434 5778899888 5565555555555432 234678889998764210
Q ss_pred ----CCcceeeEech
Q 024100 228 ----TGRYDVIWVQW 238 (272)
Q Consensus 228 ----~~~fDlIvs~~ 238 (272)
-+..|+++.+-
T Consensus 80 ~~~~~g~id~lv~nA 94 (259)
T 3edm_A 80 AADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHHCSEEEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 03689988654
No 439
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=68.76 E-value=11 Score=37.61 Aligned_cols=44 Identities=16% Similarity=0.061 Sum_probs=35.5
Q ss_pred CCCeeeEeecccchHHHHHHHhc-------CCcEEEEeCCHHHHHHHHHhcc
Q 024100 157 QHLVALDCGSGIGRITKNLLIRY-------FNEVDLLEPVSHFLDAARESLA 201 (272)
Q Consensus 157 ~~~~VLDiGcGtG~~t~~LLa~~-------~~~v~~vD~S~~mld~A~~~l~ 201 (272)
+..+|+|+=||.|.++.-| .+. |.-+.++|.++.+++.-+.+..
T Consensus 211 k~ltvIDLFAG~GGls~Gf-e~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGL-CLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHH-HHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHH-HHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 4468999999999999887 343 4567889999999998888753
No 440
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=67.85 E-value=12 Score=31.23 Aligned_cols=73 Identities=23% Similarity=0.188 Sum_probs=44.4
Q ss_pred CCeeeEeecccchHHHHH---HHh-cCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGSGIGRITKNL---LIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~L---La~-~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
..+||=.|++ |.++..+ |++ .+.+|.+++-++.-++...+.+.. ...++.++.+|+.+...-
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-------EGLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-------TTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh-------cCCeeEEEECCCCCHHHHHHHHHH
Confidence 3467766744 3333332 345 678999999887766665555432 124678889998764210
Q ss_pred ----CCcceeeEech
Q 024100 228 ----TGRYDVIWVQW 238 (272)
Q Consensus 228 ----~~~fDlIvs~~ 238 (272)
-+.+|+||.+-
T Consensus 76 ~~~~~g~id~li~~A 90 (276)
T 1wma_A 76 LRKEYGGLDVLVNNA 90 (276)
T ss_dssp HHHHHSSEEEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 02689988654
No 441
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=67.62 E-value=16 Score=30.31 Aligned_cols=75 Identities=16% Similarity=0.077 Sum_probs=45.1
Q ss_pred CCeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC--------
Q 024100 158 HLVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------- 227 (272)
Q Consensus 158 ~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~-------- 227 (272)
..+||=.|++. |......|++.+.+|.+++.++.-++...+.+.. ....+.++.+|+.+...-
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-------EGHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHHHH
Confidence 34677777543 3222222346678999999888766655554422 124688899998764210
Q ss_pred --CCcceeeEechh
Q 024100 228 --TGRYDVIWVQWC 239 (272)
Q Consensus 228 --~~~fDlIvs~~v 239 (272)
.+..|+|+.+-.
T Consensus 86 ~~~~~id~vi~~Ag 99 (260)
T 3awd_A 86 EQEGRVDILVACAG 99 (260)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 025799886543
No 442
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=67.33 E-value=7.1 Score=36.71 Aligned_cols=67 Identities=10% Similarity=0.117 Sum_probs=44.5
Q ss_pred CCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----CCCcce
Q 024100 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (272)
Q Consensus 158 ~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD 232 (272)
.++|+=+||| .|+.....|...+..|++||.+++.++.+.+.+ .+..+++|..+... .-...|
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------------~~~~i~Gd~~~~~~L~~Agi~~ad 70 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------------DLRVVNGHASHPDVLHEAGAQDAD 70 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------------SCEEEESCTTCHHHHHHHTTTTCS
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------------CcEEEEEcCCCHHHHHhcCCCcCC
Confidence 3567777776 333333333345678999999999998887765 35678888866431 124688
Q ss_pred eeEe
Q 024100 233 VIWV 236 (272)
Q Consensus 233 lIvs 236 (272)
++++
T Consensus 71 ~~ia 74 (461)
T 4g65_A 71 MLVA 74 (461)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8775
No 443
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=67.32 E-value=13 Score=31.61 Aligned_cols=77 Identities=21% Similarity=0.195 Sum_probs=45.7
Q ss_pred CeeeEeecc--cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----C----
Q 024100 159 LVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E---- 227 (272)
Q Consensus 159 ~~VLDiGcG--tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~---- 227 (272)
.++|=.|++ .|......|++.+.+|.+++-++.-++...+.+... .....++.++.+|+.+... .
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAA----GVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----ccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 467777764 333333333567889999998887776655544110 0113467888899865421 0
Q ss_pred -CCcceeeEechh
Q 024100 228 -TGRYDVIWVQWC 239 (272)
Q Consensus 228 -~~~fDlIvs~~v 239 (272)
-+..|+++.+-.
T Consensus 83 ~~g~id~lv~~Ag 95 (278)
T 1spx_A 83 KFGKLDILVNNAG 95 (278)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 026899887644
No 444
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=67.21 E-value=2.2 Score=38.29 Aligned_cols=56 Identities=9% Similarity=0.071 Sum_probs=35.0
Q ss_pred ceEEE-EeCCCCC--CCCCCcceeeEechhh--h------hcCh-hhHHHHHHHHHHhcccCcEEEEe
Q 024100 213 ATNFF-CVPLQDF--TPETGRYDVIWVQWCI--G------HLTD-DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 213 ~v~~~-~~d~~~~--~~~~~~fDlIvs~~vl--~------hl~d-~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...++ ++|..++ ..++++||+|++.=-. . |-.. ..+...|.++.++|+|||.+++.
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 45666 8886542 1234689999864321 1 1000 12457888999999999998764
No 445
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=67.04 E-value=14 Score=30.93 Aligned_cols=74 Identities=22% Similarity=0.137 Sum_probs=44.1
Q ss_pred CCeeeEeecc--cch-HHHHHHHhcCCcEEEEeC-CHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGSG--IGR-ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGcG--tG~-~t~~LLa~~~~~v~~vD~-S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.+||=.|++ .|. ++..| ++.+.+|.+++- ++.-++...+.+.. ...++.++.+|+.+...-
T Consensus 21 ~k~vlItGasggiG~~la~~l-~~~G~~v~~~~r~~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIEL-GRRGASVVVNYGSSSKAAEEVVAELKK-------LGAQGVAIQADISKPSEVVALFDK 92 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHH-HHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHH
Confidence 3478877764 333 33333 466789999987 77666555444422 134678889998764210
Q ss_pred ----CCcceeeEechh
Q 024100 228 ----TGRYDVIWVQWC 239 (272)
Q Consensus 228 ----~~~fDlIvs~~v 239 (272)
-+..|+|+.+..
T Consensus 93 ~~~~~~~~d~vi~~Ag 108 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSG 108 (274)
T ss_dssp HHHHHSCEEEEECCCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 026899886543
No 446
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=66.76 E-value=18 Score=31.10 Aligned_cols=105 Identities=10% Similarity=0.090 Sum_probs=60.4
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEEeCCHH-HHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----C-
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD~S~~-mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~- 227 (272)
+.++|=.|++.| . ++..| ++.+.+|.+++.++. ..+...+.+.. ....+.++.+|+.+..- .
T Consensus 47 gk~vlVTGas~GIG~aia~~l-a~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAF-AKEGANIAIAYLDEEGDANETKQYVEK-------EGVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESSCHHHHHHHHHHHHT-------TTCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCchHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHH
Confidence 457888886543 3 33434 567889999986543 44444443321 23568889999876421 0
Q ss_pred ----CCcceeeEechh-------hhhcChhhHHH-----------HHHHHHHhcccCcEEEEecC
Q 024100 228 ----TGRYDVIWVQWC-------IGHLTDDDFVS-----------FFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 ----~~~fDlIvs~~v-------l~hl~d~~~~~-----------~l~~~~r~LkpgG~liv~E~ 270 (272)
-+..|++|.+-. +..++.+++.. +++.+...++.+|.||..-|
T Consensus 119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 126899886533 22234344333 33444566677888876544
No 447
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=66.45 E-value=5.8 Score=36.84 Aligned_cols=43 Identities=16% Similarity=0.068 Sum_probs=34.6
Q ss_pred CCeeeEeecccchHHHHHHHhcC---Cc----EEEEeCCHHHHHHHHHhcc
Q 024100 158 HLVALDCGSGIGRITKNLLIRYF---NE----VDLLEPVSHFLDAARESLA 201 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa~~~---~~----v~~vD~S~~mld~A~~~l~ 201 (272)
..+|+|+-||.|..+..| .+.+ .- |-++|.++..++.-+.+..
T Consensus 10 ~lrvldLFsGiGG~~~Gl-~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKAL-KNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHH-HHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHH-HHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 358999999999999987 4543 33 7789999999988888774
No 448
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=66.37 E-value=35 Score=28.76 Aligned_cols=72 Identities=17% Similarity=0.110 Sum_probs=45.3
Q ss_pred CeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC---------
Q 024100 159 LVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--------- 227 (272)
Q Consensus 159 ~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~--------- 227 (272)
.++|=.|++. |......|++.+.+|.+++-++.-++...+.+. ..+.++.+|+.+...-
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----------AEAIAVVADVSDPKAVEAVFAEALE 76 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC----------SSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4677777643 333333335678899999988876666655441 3578888998664210
Q ss_pred -CCcceeeEechhh
Q 024100 228 -TGRYDVIWVQWCI 240 (272)
Q Consensus 228 -~~~fDlIvs~~vl 240 (272)
-++.|+++.+-.+
T Consensus 77 ~~g~iD~lvnnAg~ 90 (263)
T 2a4k_A 77 EFGRLHGVAHFAGV 90 (263)
T ss_dssp HHSCCCEEEEGGGG
T ss_pred HcCCCcEEEECCCC
Confidence 0257999976544
No 449
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=66.27 E-value=20 Score=30.97 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=46.6
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEEeCC------------HHHHHHHHHhccccCCCCCCCCCceEEEEeCCC
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD~S------------~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~ 222 (272)
+.++|=.|++.| . ++..| ++.+.+|.++|.+ ++-++...+.+.. ...++.++.+|+.
T Consensus 28 gk~~lVTGas~GIG~aia~~l-a~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITL-AREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-------LGRRIIASQVDVR 99 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHH-HHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-------TTCCEEEEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh-------cCCceEEEECCCC
Confidence 447787787544 3 34434 5778899999876 5556655554432 2357888999997
Q ss_pred CCCCC----------CCcceeeEechh
Q 024100 223 DFTPE----------TGRYDVIWVQWC 239 (272)
Q Consensus 223 ~~~~~----------~~~fDlIvs~~v 239 (272)
+...- -+..|++|.+-.
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 64310 136899886543
No 450
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=65.86 E-value=25 Score=29.71 Aligned_cols=105 Identities=17% Similarity=0.196 Sum_probs=61.6
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEEeC-CHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD~-S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.++|=.|++.| . ++..| ++.+.+|.+++. +...++...+.+.. ...++.++.+|+.+..--
T Consensus 18 ~k~~lVTGas~gIG~aia~~l-~~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~ 89 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHL-GRLGAKVVVNYANSTKDAEKVVSEIKA-------LGSDAIAIKADIRQVPEIVKLFDQ 89 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHH-HHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 457887886544 3 33434 577889988774 55556655555432 235688899998764210
Q ss_pred ----CCcceeeEechhhh------hcChhhHHH-----------HHHHHHHhcccCcEEEEecC
Q 024100 228 ----TGRYDVIWVQWCIG------HLTDDDFVS-----------FFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 ----~~~fDlIvs~~vl~------hl~d~~~~~-----------~l~~~~r~LkpgG~liv~E~ 270 (272)
-+..|++|.+-.+. .++.+++.. +.+.+...++++|.||..-|
T Consensus 90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 02679988654332 223333332 33455567777888876544
No 451
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=65.80 E-value=22 Score=29.73 Aligned_cols=72 Identities=14% Similarity=0.057 Sum_probs=43.7
Q ss_pred CCeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----C---
Q 024100 158 HLVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E--- 227 (272)
Q Consensus 158 ~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~--- 227 (272)
+.++|=.|++. |......|++.+.+|.+++.++.-++...+.+. ..+.++.+|+.+... .
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~d~~~v~~~~~~~~ 81 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----------NGGFAVEVDVTKRASVDAAMQKAI 81 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----------TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----------cCCeEEEEeCCCHHHHHHHHHHHH
Confidence 34677777643 333222335678899999988876665544431 156788888865421 0
Q ss_pred --CCcceeeEechh
Q 024100 228 --TGRYDVIWVQWC 239 (272)
Q Consensus 228 --~~~fDlIvs~~v 239 (272)
-+..|++|.+-.
T Consensus 82 ~~~g~iD~lv~~Ag 95 (263)
T 3ak4_A 82 DALGGFDLLCANAG 95 (263)
T ss_dssp HHHTCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 026899886543
No 452
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=65.60 E-value=23 Score=29.95 Aligned_cols=75 Identities=17% Similarity=0.021 Sum_probs=46.7
Q ss_pred CCeeeEeecc--cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC--------
Q 024100 158 HLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------- 227 (272)
Q Consensus 158 ~~~VLDiGcG--tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~-------- 227 (272)
+.++|=.|++ .|......|++.+.+|.+++-++.-++...+.+.. ....+.++.+|+.+...-
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-------KGLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3467877764 33333333356788999999888776665554422 124678888998654210
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
.+..|+++.+-.
T Consensus 94 ~~~~g~id~lv~nAg 108 (273)
T 1ae1_A 94 HVFDGKLNILVNNAG 108 (273)
T ss_dssp HHTTSCCCEEEECCC
T ss_pred HHcCCCCcEEEECCC
Confidence 146899886644
No 453
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=65.40 E-value=3.3 Score=36.72 Aligned_cols=45 Identities=20% Similarity=0.379 Sum_probs=28.6
Q ss_pred CCCCCCcceeeEec----hhhhhcCh-hhH----HHHHHHHHHhcccCcEEEEe
Q 024100 224 FTPETGRYDVIWVQ----WCIGHLTD-DDF----VSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 224 ~~~~~~~fDlIvs~----~vl~hl~d-~~~----~~~l~~~~r~LkpgG~liv~ 268 (272)
+++.-++||+|+++ +-.||... +|. .-+-....++|+|||.+++.
T Consensus 205 ~P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~ 258 (324)
T 3trk_A 205 LPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR 258 (324)
T ss_dssp CCGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEE
T ss_pred CCCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 44444799999975 45777643 231 12223334899999999874
No 454
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=64.79 E-value=29 Score=25.52 Aligned_cols=90 Identities=12% Similarity=0.006 Sum_probs=47.1
Q ss_pred CeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC----CCCCccee
Q 024100 159 LVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYDV 233 (272)
Q Consensus 159 ~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fDl 233 (272)
.+|+=+|+| .|......+.+.+.+|.++|.++.-++.+++ ....++.+|..+.. .....+|+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-------------~~~~~~~~d~~~~~~l~~~~~~~~d~ 73 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-------------YATHAVIANATEENELLSLGIRNFEY 73 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-------------TCSEEEECCTTCHHHHHTTTGGGCSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------hCCEEEEeCCCCHHHHHhcCCCCCCE
Confidence 368888975 2333333334556789999988765433221 12345666664321 01236898
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEE
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~li 266 (272)
|+..-.- +.+....+....+.+.+. .++
T Consensus 74 vi~~~~~----~~~~~~~~~~~~~~~~~~-~ii 101 (144)
T 2hmt_A 74 VIVAIGA----NIQASTLTTLLLKELDIP-NIW 101 (144)
T ss_dssp EEECCCS----CHHHHHHHHHHHHHTTCS-EEE
T ss_pred EEECCCC----chHHHHHHHHHHHHcCCC-eEE
Confidence 8865432 112223344444556665 444
No 455
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=64.25 E-value=35 Score=28.01 Aligned_cols=74 Identities=15% Similarity=0.051 Sum_probs=44.0
Q ss_pred eeeEeecc--cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC----------
Q 024100 160 VALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---------- 227 (272)
Q Consensus 160 ~VLDiGcG--tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~---------- 227 (272)
++|=.|++ .|......|++.+.+|.+++-++.-++...+.+.. .....+.++.+|+.+...-
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH------AYADKVLRVRADVADEGDVNAAIAATMEQ 77 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHST------TTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH------hcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56766754 33322222346678999999888766665554411 1234688899998764210
Q ss_pred CCcceeeEechh
Q 024100 228 TGRYDVIWVQWC 239 (272)
Q Consensus 228 ~~~fDlIvs~~v 239 (272)
-+..|+|+.+-.
T Consensus 78 ~~~id~li~~Ag 89 (250)
T 2cfc_A 78 FGAIDVLVNNAG 89 (250)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 025899886543
No 456
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=63.70 E-value=13 Score=31.57 Aligned_cols=72 Identities=11% Similarity=-0.020 Sum_probs=42.3
Q ss_pred CCeeeEeec----ccchHHHHHHHhcCCcEEEEeCCHHH-HHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----C
Q 024100 158 HLVALDCGS----GIGRITKNLLIRYFNEVDLLEPVSHF-LDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E 227 (272)
Q Consensus 158 ~~~VLDiGc----GtG~~t~~LLa~~~~~v~~vD~S~~m-ld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~ 227 (272)
+.++|=.|+ |.|.-....|++.+.+|.+++.++.- ++...+.+ ...+.++.+|+.+... .
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~ 76 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL----------PAKAPLLELDVQNEEHLASLAG 76 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS----------SSCCCEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc----------CCCceEEEccCCCHHHHHHHHH
Confidence 347888887 44433333335678899999876532 34333322 2356788889866421 0
Q ss_pred -----CC---cceeeEechh
Q 024100 228 -----TG---RYDVIWVQWC 239 (272)
Q Consensus 228 -----~~---~fDlIvs~~v 239 (272)
-+ ..|++|.+-.
T Consensus 77 ~~~~~~g~~~~iD~lv~nAg 96 (269)
T 2h7i_A 77 RVTEAIGAGNKLDGVVHSIG 96 (269)
T ss_dssp HHHHHHCTTCCEEEEEECCC
T ss_pred HHHHHhCCCCCceEEEECCc
Confidence 02 6899986543
No 457
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=63.38 E-value=15 Score=30.99 Aligned_cols=70 Identities=10% Similarity=-0.045 Sum_probs=40.0
Q ss_pred CeeeEeec----ccchHHHHHHHhcCCcEEEEeCCH---HHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----
Q 024100 159 LVALDCGS----GIGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (272)
Q Consensus 159 ~~VLDiGc----GtG~~t~~LLa~~~~~v~~vD~S~---~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----- 226 (272)
.++|=.|+ |.|......|++.+.+|.+++-++ ..++...+.. ....++.+|+.+...
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-----------~~~~~~~~D~~~~~~v~~~~ 78 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL-----------GSDIVLQCDVAEDASIDTMF 78 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT-----------TCCCEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc-----------CCcEEEEccCCCHHHHHHHH
Confidence 46787785 455444334456788999998665 2222222211 123678888865421
Q ss_pred -----CCCcceeeEechh
Q 024100 227 -----ETGRYDVIWVQWC 239 (272)
Q Consensus 227 -----~~~~fDlIvs~~v 239 (272)
.-+..|++|.+-.
T Consensus 79 ~~~~~~~g~iD~lv~~Ag 96 (265)
T 1qsg_A 79 AELGKVWPKFDGFVHSIG 96 (265)
T ss_dssp HHHHTTCSSEEEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 0136899887654
No 458
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=61.92 E-value=17 Score=31.50 Aligned_cols=86 Identities=14% Similarity=0.001 Sum_probs=51.8
Q ss_pred CeeeEeecc-cch-HHHHHHHhcCC---cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 159 LVALDCGSG-IGR-ITKNLLIRYFN---EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 159 ~~VLDiGcG-tG~-~t~~LLa~~~~---~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
.+|.=|||| .|. ++..| .+.+. +|.++|.+++-++...+.+ .+.+. .+..+. - ...|+
T Consensus 4 ~~I~iIG~G~mG~aia~~l-~~~g~~~~~V~v~dr~~~~~~~l~~~~------------gi~~~-~~~~~~--~-~~aDv 66 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGL-IANGYDPNRICVTNRSLDKLDFFKEKC------------GVHTT-QDNRQG--A-LNADV 66 (280)
T ss_dssp SCEEEESCSHHHHHHHHHH-HHTTCCGGGEEEECSSSHHHHHHHHTT------------CCEEE-SCHHHH--H-SSCSE
T ss_pred CEEEEEcccHHHHHHHHHH-HHCCCCCCeEEEEeCCHHHHHHHHHHc------------CCEEe-CChHHH--H-hcCCe
Confidence 367778887 333 34434 35554 8999999998777776543 12221 121111 1 25788
Q ss_pred eEechhhhhcChhhHHHHHHHHHHh-cccCcEEE
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKEN-IARSGTFL 266 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~-LkpgG~li 266 (272)
|+..-- +..+..+++++... ++++-.++
T Consensus 67 Vilav~-----p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 67 VVLAVK-----PHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp EEECSC-----GGGHHHHHHHHHHHHHTTTCEEE
T ss_pred EEEEeC-----HHHHHHHHHHHHhhccCCCeEEE
Confidence 886542 34456888888887 77665555
No 459
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=61.88 E-value=40 Score=28.76 Aligned_cols=85 Identities=11% Similarity=0.094 Sum_probs=52.5
Q ss_pred eeeEeec-c-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEec
Q 024100 160 VALDCGS-G-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (272)
Q Consensus 160 ~VLDiGc-G-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~ 237 (272)
+|.=||+ | .|......+.+.+.+|.++|.+++-++.+.+ .. +.. .+..+. -...|+|+..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~g------------~~~--~~~~~~---~~~aDvVi~a 74 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-MG------------IPL--TDGDGW---IDEADVVVLA 74 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-TT------------CCC--CCSSGG---GGTCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-cC------------CCc--CCHHHH---hcCCCEEEEc
Confidence 6888888 7 3433332335666799999999887776654 11 111 122111 1358998865
Q ss_pred hhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 238 WCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 238 ~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
-. +.....+++++...++||..+++
T Consensus 75 v~-----~~~~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 75 LP-----DNIIEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp SC-----HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred CC-----chHHHHHHHHHHHhCCCCCEEEE
Confidence 43 23355788888888888877765
No 460
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=61.59 E-value=27 Score=30.04 Aligned_cols=102 Identities=14% Similarity=0.011 Sum_probs=57.4
Q ss_pred eeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccC--------CCCCC----CCCceEEEEeCCCCCCC
Q 024100 160 VALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPEN--------HMAPD----MHKATNFFCVPLQDFTP 226 (272)
Q Consensus 160 ~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~--------~~~~~----~~~~v~~~~~d~~~~~~ 226 (272)
+|.=||+|. |.-....++..+.+|.++|.+++.++.+.+.+.... ..... ...++.+ ..++.+.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~-- 82 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA-- 82 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH--
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH--
Confidence 677788884 333222335678899999999999888876531100 00000 0011222 2232211
Q ss_pred CCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 227 ~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
-...|+|+..-.- . .+....+++++...++|+..++..
T Consensus 83 -~~~aDlVi~av~~-~--~~~~~~v~~~l~~~~~~~~il~s~ 120 (283)
T 4e12_A 83 -VKDADLVIEAVPE-S--LDLKRDIYTKLGELAPAKTIFATN 120 (283)
T ss_dssp -TTTCSEEEECCCS-C--HHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred -hccCCEEEEeccC-c--HHHHHHHHHHHHhhCCCCcEEEEC
Confidence 1357888765321 0 013457899999999998887743
No 461
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=61.57 E-value=27 Score=29.10 Aligned_cols=75 Identities=8% Similarity=-0.050 Sum_probs=44.7
Q ss_pred CCeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----C---
Q 024100 158 HLVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E--- 227 (272)
Q Consensus 158 ~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~--- 227 (272)
+.+||=.|++. |......|++.+.+|.+++-++.-++...+.+.. ....+.++.+|+.+... .
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-------KGFQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 34677777643 3322223346678999999887766655544422 12357888888865421 0
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
.+..|+|+.+-.
T Consensus 87 ~~~~~~id~li~~Ag 101 (266)
T 1xq1_A 87 SMFGGKLDILINNLG 101 (266)
T ss_dssp HHHTTCCSEEEEECC
T ss_pred HHhCCCCcEEEECCC
Confidence 046799886543
No 462
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=61.56 E-value=33 Score=29.11 Aligned_cols=106 Identities=18% Similarity=0.108 Sum_probs=61.1
Q ss_pred CCCeeeEeecccc--h-HHHHHHHhcCCcEEEEe-CCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-----
Q 024100 157 QHLVALDCGSGIG--R-ITKNLLIRYFNEVDLLE-PVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----- 227 (272)
Q Consensus 157 ~~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD-~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~----- 227 (272)
.+.++|=.|++.| . ++..| ++.+.+|.+++ .+...++...+.+.. ....+.++.+|+.+...-
T Consensus 30 ~gk~~lVTGas~GIG~aia~~l-a~~G~~V~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRL-ALEGAAVALTYVNAAERAQAVVSEIEQ-------AGGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHH
Confidence 3457888887544 3 34434 57788998886 444555555544432 234678889998764210
Q ss_pred -----CCcceeeEechhh------hhcChhhHHH-----------HHHHHHHhcccCcEEEEecC
Q 024100 228 -----TGRYDVIWVQWCI------GHLTDDDFVS-----------FFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 -----~~~fDlIvs~~vl------~hl~d~~~~~-----------~l~~~~r~LkpgG~liv~E~ 270 (272)
-++.|++|.+-.+ ..++.+++.+ +++.+...++++|.||..-|
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 1268998865432 2233333332 34445566777888776543
No 463
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=61.50 E-value=31 Score=29.46 Aligned_cols=76 Identities=17% Similarity=0.110 Sum_probs=47.1
Q ss_pred CCeeeEeeccc--chHHHHHHHhcCCcEEEEeC-CHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 158 HLVALDCGSGI--GRITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 158 ~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~-S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
..++|=.|++. |.-....|++.+.+|.+++. +++-++...+.+.. ....+.++.+|+.+...-
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG-------LGARVIFLRADLADLSSHQATVDAV 101 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH-------TTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 44677778654 33333333577889999984 77666665555432 235688999999775311
Q ss_pred ---CCcceeeEechhh
Q 024100 228 ---TGRYDVIWVQWCI 240 (272)
Q Consensus 228 ---~~~fDlIvs~~vl 240 (272)
-++.|++|.+-.+
T Consensus 102 ~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 102 VAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHSCCCEEEEECC-
T ss_pred HHHcCCCCEEEECCCc
Confidence 0268999866543
No 464
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=60.73 E-value=9 Score=34.79 Aligned_cols=91 Identities=13% Similarity=0.150 Sum_probs=53.8
Q ss_pred CeeeEeecc-cch-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 159 LVALDCGSG-IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 159 ~~VLDiGcG-tG~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
.+|.=||+| .|. ++..| .+.+.+|.++|.+++-++.+.+. .+.+ ..+..+.-......|+|++
T Consensus 23 mkIgiIGlG~mG~~~A~~L-~~~G~~V~v~dr~~~~~~~l~~~-------------g~~~-~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRL-RKGGHECVVYDLNVNAVQALERE-------------GIAG-ARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHTT-------------TCBC-CSSHHHHHHHSCSSCEEEE
T ss_pred CEEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHHHHHHHC-------------CCEE-eCCHHHHHhcCCCCCEEEE
Confidence 467778877 343 33333 56778999999999877666532 0110 1111111000123488886
Q ss_pred chhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
.-. +.....++..+...|++|..|++.-
T Consensus 88 ~vp-----~~~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 88 MVP-----AAVVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp CSC-----GGGHHHHHHHHGGGCCTTCEEEECS
T ss_pred eCC-----HHHHHHHHHHHHhhCCCCCEEEeCC
Confidence 543 2345578888888899988887753
No 465
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=60.66 E-value=27 Score=30.64 Aligned_cols=88 Identities=15% Similarity=0.012 Sum_probs=55.1
Q ss_pred CCeeeEeecccchHHHHHHH---hcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCC----CCCCc
Q 024100 158 HLVALDCGSGIGRITKNLLI---RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~LLa---~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~ 230 (272)
..+++=+|+ |+++..++. +.+. |.++|.+++.++ +++. .+.++.+|..+.. ..-..
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~-------------~~~~i~gd~~~~~~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLRS-------------GANFVHGDPTRVSDLEKANVRG 177 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHT-------------TCEEEESCTTSHHHHHHTCSTT
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhC-------------CcEEEEeCCCCHHHHHhcChhh
Confidence 346777776 667666642 2355 999999998887 5531 4678888886542 11247
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEE
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv 267 (272)
.|.|++.. ++++..-......+.+.|...++.
T Consensus 178 a~~vi~~~-----~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 178 ARAVIVDL-----ESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp EEEEEECC-----SSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred ccEEEEcC-----CccHHHHHHHHHHHHHCCCCeEEE
Confidence 88888653 234433455555677777766654
No 466
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=60.51 E-value=8.3 Score=34.69 Aligned_cols=66 Identities=20% Similarity=0.212 Sum_probs=42.5
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-C--CCcce
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-E--TGRYD 232 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-~--~~~fD 232 (272)
+.++||=+||| +|+.....|++ ..+|++.|.+..-++.+++. +..+..|+.+..- . -..+|
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~--------------~~~~~~d~~d~~~l~~~~~~~D 79 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEF--------------ATPLKVDASNFDKLVEVMKEFE 79 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTT--------------SEEEECCTTCHHHHHHHHTTCS
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhcc--------------CCcEEEecCCHHHHHHHHhCCC
Confidence 45689999997 66665555544 46899999998877766432 3445566654321 0 13689
Q ss_pred eeEec
Q 024100 233 VIWVQ 237 (272)
Q Consensus 233 lIvs~ 237 (272)
+|++.
T Consensus 80 vVi~~ 84 (365)
T 3abi_A 80 LVIGA 84 (365)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98865
No 467
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=60.44 E-value=20 Score=31.51 Aligned_cols=101 Identities=13% Similarity=0.021 Sum_probs=54.8
Q ss_pred CeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCC--CceEEEEeCCCCCCCCCCcceeeE
Q 024100 159 LVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH--KATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 159 ~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.+|.=||+|. |......|++.+.+|+++|.+++-++..++..... ....... ..+.....+..+. -..+|+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~D~vi 80 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAII-AEGPGLAGTAHPDLLTSDIGLA---VKDADVIL 80 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEE-EESSSCCEEECCSEEESCHHHH---HTTCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeE-EeccccccccccceecCCHHHH---HhcCCEEE
Confidence 4788889884 43333333566779999999988777766542100 0000000 0000011121110 13589888
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..--- .....+++.+...+++|..++..
T Consensus 81 ~~v~~-----~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 81 IVVPA-----IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp ECSCG-----GGHHHHHHHHGGGCCTTCEEEES
T ss_pred EeCCc-----hHHHHHHHHHHHhCCCCCEEEEc
Confidence 65432 22347888888889888766654
No 468
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=59.96 E-value=4.2 Score=32.19 Aligned_cols=41 Identities=15% Similarity=0.252 Sum_probs=26.9
Q ss_pred CCCCcceeeEechhhhhcChhhH-HHHHHHHHHhcccCcEEEE
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDF-VSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~-~~~l~~~~r~LkpgG~liv 267 (272)
+++++||+|+.-.--.. ....+ ..++..+...|+|||.+..
T Consensus 55 Lp~stYD~V~~lt~~~~-~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQ-TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSS-CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCcc-chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 35579999884221110 00112 5899999999999998863
No 469
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=59.68 E-value=34 Score=29.15 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=46.4
Q ss_pred CCeeeEeecccchHHHHH---HHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----C--
Q 024100 158 HLVALDCGSGIGRITKNL---LIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG~~t~~L---La~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~-- 227 (272)
+.+||=.|++ |.++..+ |++.+.+|.+++-++.-++...+.+.... .......+.++.+|+.+... .
T Consensus 18 ~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 18 GQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANL--PPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTS--CTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--cccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 3478877764 3333332 24567899999988876666555442100 00013468899999876421 0
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
-+..|+||.+-.
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 025899986544
No 470
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=59.62 E-value=30 Score=27.55 Aligned_cols=96 Identities=14% Similarity=0.042 Sum_probs=52.2
Q ss_pred eeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-CCcceeeEe
Q 024100 160 VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWV 236 (272)
Q Consensus 160 ~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fDlIvs 236 (272)
+||=.|+ +.|......|.+.+.+|.+++-++.-++... ..+.++.+|+.+.... -..+|+|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------------~~~~~~~~D~~d~~~~~~~~~d~vi~ 67 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------------KDINILQKDIFDLTLSDLSDQNVVVD 67 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------------SSSEEEECCGGGCCHHHHTTCSEEEE
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------------CCCeEEeccccChhhhhhcCCCEEEE
Confidence 5666664 2454433333466789999987764332211 3578889998765321 136899987
Q ss_pred chhhhhcChhhHHHHHHHHHHhccc--CcEEEEec
Q 024100 237 QWCIGHLTDDDFVSFFKRAKENIAR--SGTFLLSH 269 (272)
Q Consensus 237 ~~vl~hl~d~~~~~~l~~~~r~Lkp--gG~liv~E 269 (272)
+.....-...........+.+.++. .+.+|..-
T Consensus 68 ~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 68 AYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp CCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred CCcCCccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 6544221112122444555555544 35666543
No 471
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=59.20 E-value=22 Score=29.76 Aligned_cols=73 Identities=22% Similarity=0.160 Sum_probs=44.3
Q ss_pred eeeEeecc--cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC----------
Q 024100 160 VALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---------- 227 (272)
Q Consensus 160 ~VLDiGcG--tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~---------- 227 (272)
++|=.|++ .|......|++.+.+|.+++-++.-++...+.+.. ...++.++.+|+.+...-
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-------AGGHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56666754 34333333356788999999888766655554422 123578888898664210
Q ss_pred CCcceeeEechh
Q 024100 228 TGRYDVIWVQWC 239 (272)
Q Consensus 228 ~~~fDlIvs~~v 239 (272)
-+..|++|.+-.
T Consensus 77 ~g~id~lv~nAg 88 (256)
T 1geg_A 77 LGGFDVIVNNAG 88 (256)
T ss_dssp TTCCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 136899986543
No 472
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=58.42 E-value=5.4 Score=33.71 Aligned_cols=85 Identities=15% Similarity=0.145 Sum_probs=46.1
Q ss_pred eeeEeecc-cch-HHHHHHHhcCC----cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 160 VALDCGSG-IGR-ITKNLLIRYFN----EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 160 ~VLDiGcG-tG~-~t~~LLa~~~~----~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
+|.=|||| .|. ++..| .+.+. +|.++|.+++-++...+... +.. ..+..+. -...|+
T Consensus 4 ~i~iIG~G~mG~~~a~~l-~~~g~~~~~~V~~~~r~~~~~~~~~~~~g------------~~~-~~~~~e~---~~~aDv 66 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGM-INKNIVSSNQIICSDLNTANLKNASEKYG------------LTT-TTDNNEV---AKNADI 66 (247)
T ss_dssp CEEEECCSHHHHHHHHHH-HHTTSSCGGGEEEECSCHHHHHHHHHHHC------------CEE-CSCHHHH---HHHCSE
T ss_pred eEEEECccHHHHHHHHHH-HhCCCCCCCeEEEEeCCHHHHHHHHHHhC------------CEE-eCChHHH---HHhCCE
Confidence 57778887 333 44434 45555 99999999987777765431 111 1111110 024677
Q ss_pred eEechhhhhcChhhHHHHHHHHHHhcccCcEEE
Q 024100 234 IWVQWCIGHLTDDDFVSFFKRAKENIARSGTFL 266 (272)
Q Consensus 234 Ivs~~vl~hl~d~~~~~~l~~~~r~LkpgG~li 266 (272)
|+..- +......+++++...++||..++
T Consensus 67 Vilav-----~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 67 LILSI-----KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp EEECS-----CTTTHHHHC---CCSSCTTCEEE
T ss_pred EEEEe-----CHHHHHHHHHHHHhhcCCCCEEE
Confidence 77544 22344567777777777766555
No 473
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=58.38 E-value=26 Score=32.65 Aligned_cols=102 Identities=11% Similarity=0.145 Sum_probs=54.5
Q ss_pred eeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCC---------CCceEEEEeCCCCCCCCCC
Q 024100 160 VALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDM---------HKATNFFCVPLQDFTPETG 229 (272)
Q Consensus 160 ~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~---------~~~v~~~~~d~~~~~~~~~ 229 (272)
+|.=||+| .|......+++.+.+|+++|.+++-++..++..... ..... ..++.+ ..|..+. -.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i--~e~gl~~~l~~~~~~~~l~~-t~d~~ea---~~ 77 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPI--YEPGLEKMIARNVKAGRLRF-GTEIEQA---VP 77 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCC--CSTTHHHHHHHHHHTTSEEE-ESCHHHH---GG
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcc--cCCCHHHHHHhhcccCcEEE-ECCHHHH---Hh
Confidence 56677887 343333344677889999999998888776532100 00000 112232 2222211 12
Q ss_pred cceeeEechhhh----hcCh-hhHHHHHHHHHHhcccCcEEEE
Q 024100 230 RYDVIWVQWCIG----HLTD-DDFVSFFKRAKENIARSGTFLL 267 (272)
Q Consensus 230 ~fDlIvs~~vl~----hl~d-~~~~~~l~~~~r~LkpgG~liv 267 (272)
..|+|+..-.-. .-+| ..+..+++.+...|++|-.+++
T Consensus 78 ~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~ 120 (450)
T 3gg2_A 78 EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVT 120 (450)
T ss_dssp GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEE
Confidence 578877543210 0001 1456788888888887765554
No 474
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=58.02 E-value=30 Score=28.88 Aligned_cols=76 Identities=20% Similarity=0.119 Sum_probs=51.3
Q ss_pred CCeeeEeec-c--cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 158 HLVALDCGS-G--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 158 ~~~VLDiGc-G--tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
+.++|=.|+ | .|......|++.+.+|.+++-++.-++...+.+... ...++.++.+|+.+...-
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL------GLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------CSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc------CCCceEEEEeCCCCHHHHHHHHHHH
Confidence 457888886 4 565444444678889999999888777776666321 235789999999764210
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
-++.|++|.+-.
T Consensus 96 ~~~~g~id~li~~Ag 110 (266)
T 3o38_A 96 VEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCcEEEECCC
Confidence 026799986644
No 475
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=57.77 E-value=36 Score=30.14 Aligned_cols=96 Identities=10% Similarity=0.042 Sum_probs=52.7
Q ss_pred CCCCCeeeEeec--ccchHHHHHHHhcCCcEEEE-eCCH---HHHHHHHHhccccCCCCCCCCCceEEEE---eCCCCCC
Q 024100 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLL-EPVS---HFLDAARESLAPENHMAPDMHKATNFFC---VPLQDFT 225 (272)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~t~~LLa~~~~~v~~v-D~S~---~mld~A~~~l~~~~~~~~~~~~~v~~~~---~d~~~~~ 225 (272)
+.++.+||=+|+ |.|..+..++...+.++.++ +.++ +-++.+++ +. ....++... .++.+..
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-lG--------a~~vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKS-LG--------AEHVITEEELRRPEMKNFF 235 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHH-TT--------CSEEEEHHHHHSGGGGGTT
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHh-cC--------CcEEEecCcchHHHHHHHH
Confidence 567789999996 58888888865556666655 3332 23455543 31 111111100 1122221
Q ss_pred CCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 226 ~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
...+.+|+|+-.-. .+. + .+..+.|+++|.++..
T Consensus 236 ~~~~~~Dvvid~~g-----~~~---~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 236 KDMPQPRLALNCVG-----GKS---S-TELLRQLARGGTMVTY 269 (357)
T ss_dssp SSSCCCSEEEESSC-----HHH---H-HHHHTTSCTTCEEEEC
T ss_pred hCCCCceEEEECCC-----cHH---H-HHHHHhhCCCCEEEEE
Confidence 11114898875432 122 2 3467899999998764
No 476
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=57.41 E-value=82 Score=27.38 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=50.2
Q ss_pred eeeEeeccc-chHHHHHHHhcCC--cEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEe
Q 024100 160 VALDCGSGI-GRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (272)
Q Consensus 160 ~VLDiGcGt-G~~t~~LLa~~~~--~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs 236 (272)
+|.=+|+|. |......++..+. +|.++|.+++.++.....+.... .......+...+.+.+ ...|+|+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~----~~~~~~~i~~~~~~a~----~~aDvVIi 73 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAA----PVSHGTRVWHGGHSEL----ADAQVVIL 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSC----CTTSCCEEEEECGGGG----TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhh----hhcCCeEEEECCHHHh----CCCCEEEE
Confidence 466678863 3322223344444 89999999876653222222110 0112333433343322 35799887
Q ss_pred chhhhhcC----------h-hhHHHHHHHHHHhcccCcEEEEe
Q 024100 237 QWCIGHLT----------D-DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 237 ~~vl~hl~----------d-~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
.--....+ + +-+..+++.+.+. .|++.+++.
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~ 115 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVT 115 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEEC
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence 64221110 1 1234566666666 699988764
No 477
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=57.24 E-value=9.6 Score=32.58 Aligned_cols=21 Identities=5% Similarity=0.344 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhcccCcEEEEe
Q 024100 248 FVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 248 ~~~~l~~~~r~LkpgG~liv~ 268 (272)
+...|.+++++|+|||.+++.
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEE
Confidence 346888889999999998765
No 478
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=56.99 E-value=35 Score=28.67 Aligned_cols=72 Identities=17% Similarity=0.095 Sum_probs=44.2
Q ss_pred CCeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-----C---
Q 024100 158 HLVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E--- 227 (272)
Q Consensus 158 ~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~-----~--- 227 (272)
+.++|=.|++. |+.....|++.+.+|.+++-++.-++...+.+. ..+.++.+|+.+... .
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~ 76 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------DAARYVHLDVTQPAQWKAAVDTAV 76 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----------cCceEEEecCCCHHHHHHHHHHHH
Confidence 34677777643 333322335678899999988876665555442 247788888865421 0
Q ss_pred --CCcceeeEechh
Q 024100 228 --TGRYDVIWVQWC 239 (272)
Q Consensus 228 --~~~fDlIvs~~v 239 (272)
-+..|+++.+-.
T Consensus 77 ~~~g~iD~lv~~Ag 90 (260)
T 1nff_A 77 TAFGGLHVLVNNAG 90 (260)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 026899886644
No 479
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=56.51 E-value=79 Score=25.63 Aligned_cols=71 Identities=25% Similarity=0.232 Sum_probs=42.1
Q ss_pred CCeeeEeecc--cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC------CCC
Q 024100 158 HLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ETG 229 (272)
Q Consensus 158 ~~~VLDiGcG--tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~------~~~ 229 (272)
..+||=.|++ .|......|++.+.+|.+++.++.-++...+.. ..++++.+|+.+... .-+
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----------PGIEPVCVDLGDWDATEKALGGIG 75 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------TTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----------cCCCcEEecCCCHHHHHHHHHHcC
Confidence 3467777763 333333333466789999998876655444332 235667888865321 113
Q ss_pred cceeeEechh
Q 024100 230 RYDVIWVQWC 239 (272)
Q Consensus 230 ~fDlIvs~~v 239 (272)
+.|+|+.+-.
T Consensus 76 ~id~vi~~Ag 85 (244)
T 1cyd_A 76 PVDLLVNNAA 85 (244)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 6899986544
No 480
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=56.45 E-value=14 Score=32.80 Aligned_cols=89 Identities=4% Similarity=-0.005 Sum_probs=53.7
Q ss_pred CeeeEe-ec-ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC------CCCc
Q 024100 159 LVALDC-GS-GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ETGR 230 (272)
Q Consensus 159 ~~VLDi-Gc-GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~ 230 (272)
.+||=. |+ |.|..+..++...+.+|.+++.+++-++.+++. . . -..+..+-+++.. ....
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~-G---------a--~~~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI-G---------A--AHVLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH-T---------C--SEEEETTSTTHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C---------C--CEEEECCcHHHHHHHHHHhcCCC
Confidence 355543 43 367777777656688999999998888888753 1 1 1122222111110 0125
Q ss_pred ceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 231 YDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 231 fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+|+-+-.- ..+..+.+.|+++|.++..
T Consensus 234 ~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 234 PRIFLDAVTG---------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp CCEEEESSCH---------HHHHHHHHHSCTTCEEEEC
T ss_pred CcEEEECCCC---------hhHHHHHhhhcCCCEEEEE
Confidence 9998854332 1236677899999998864
No 481
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=56.35 E-value=30 Score=28.25 Aligned_cols=70 Identities=16% Similarity=0.099 Sum_probs=42.2
Q ss_pred CCeeeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCce-EEEEeCCC-CCCCCCCccee
Q 024100 158 HLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKAT-NFFCVPLQ-DFTPETGRYDV 233 (272)
Q Consensus 158 ~~~VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v-~~~~~d~~-~~~~~~~~fDl 233 (272)
+.+||=.|+ |.|+.....|.+.+.+|.+++-++.-++.... ..+ .++.+|+. .+...-+..|+
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~D~ 87 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------------RGASDIVVANLEEDFSHAFASIDA 87 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------------TTCSEEEECCTTSCCGGGGTTCSE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------------CCCceEEEcccHHHHHHHHcCCCE
Confidence 457888885 34433333334567899999877665443322 146 78888885 22211146899
Q ss_pred eEechhh
Q 024100 234 IWVQWCI 240 (272)
Q Consensus 234 Ivs~~vl 240 (272)
|+.+...
T Consensus 88 vi~~ag~ 94 (236)
T 3e8x_A 88 VVFAAGS 94 (236)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9976554
No 482
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=56.33 E-value=47 Score=27.72 Aligned_cols=77 Identities=21% Similarity=0.131 Sum_probs=45.7
Q ss_pred CeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC---------
Q 024100 159 LVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--------- 227 (272)
Q Consensus 159 ~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~--------- 227 (272)
.++|=.|++. |......|++.+.+|.+++-++.-.+...+.+... .....+.++.+|+.+...-
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-----FEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-----SCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-----cCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 4677777643 33332233567889999998877666555444211 0124678889998664210
Q ss_pred -CCcceeeEechhh
Q 024100 228 -TGRYDVIWVQWCI 240 (272)
Q Consensus 228 -~~~fDlIvs~~vl 240 (272)
-+..|+++.+-..
T Consensus 83 ~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 83 HFGRLDILVNNAGV 96 (267)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 0257998876543
No 483
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=56.02 E-value=24 Score=29.93 Aligned_cols=74 Identities=11% Similarity=-0.019 Sum_probs=41.8
Q ss_pred CCeeeEeec----ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGS----GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGc----GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
..++|=.|+ |.|......|++.+.+|.+++-++. .+...+.+.. ....+.++.+|+.+...-
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~-------~~~~~~~~~~D~~~~~~v~~~~~~ 77 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQ-------ELNSPYVYELDVSKEEHFKSLYNS 77 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHH-------HTTCCCEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHH-------hcCCcEEEEcCCCCHHHHHHHHHH
Confidence 346888885 4554444444567889999987664 2222222211 011367888888664210
Q ss_pred ----CCcceeeEechh
Q 024100 228 ----TGRYDVIWVQWC 239 (272)
Q Consensus 228 ----~~~fDlIvs~~v 239 (272)
-+..|++|.+-.
T Consensus 78 ~~~~~g~id~lv~nAg 93 (275)
T 2pd4_A 78 VKKDLGSLDFIVHSVA 93 (275)
T ss_dssp HHHHTSCEEEEEECCC
T ss_pred HHHHcCCCCEEEECCc
Confidence 136899886643
No 484
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=55.87 E-value=29 Score=29.47 Aligned_cols=105 Identities=15% Similarity=0.073 Sum_probs=59.8
Q ss_pred CCeeeEeecccc--h-HHHHHHHhcCCcEEEEe-CCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGSGIG--R-ITKNLLIRYFNEVDLLE-PVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD-~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.++|=.|++.| . ++..| ++.+.+|.+++ .++...+...+.+.. ....+.++.+|+.+...-
T Consensus 27 ~k~~lVTGas~GIG~aia~~l-a~~G~~Vv~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARL-ASDGFTVVINYAGKAAAAEEVAGKIEA-------AGGKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHH-HHHTCEEEEEESSCSHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 346777776544 3 33434 56788898874 444445554444422 234678889998764310
Q ss_pred ----CCcceeeEechhh------hhcChhhHHH-----------HHHHHHHhcccCcEEEEecC
Q 024100 228 ----TGRYDVIWVQWCI------GHLTDDDFVS-----------FFKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 ----~~~fDlIvs~~vl------~hl~d~~~~~-----------~l~~~~r~LkpgG~liv~E~ 270 (272)
-++.|++|.+-.+ ...+.+++.+ +++.+...++++|.||..-|
T Consensus 99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 0368998865433 2233333332 34455566777888876543
No 485
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=55.67 E-value=16 Score=32.74 Aligned_cols=104 Identities=18% Similarity=0.099 Sum_probs=58.9
Q ss_pred CCeeeEeeccc-chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhcccc-------CCCCCC-C----CCceEEEEeCCCCC
Q 024100 158 HLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE-------NHMAPD-M----HKATNFFCVPLQDF 224 (272)
Q Consensus 158 ~~~VLDiGcGt-G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~-------~~~~~~-~----~~~v~~~~~d~~~~ 224 (272)
..+|.=||+|+ |.-....++..+.+|.++|++++.++.+.+++... ...... . ..++++ ..|+.+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~~a 84 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchHhH
Confidence 45899999994 43333344678899999999999998887655321 000000 0 012222 2222210
Q ss_pred CCCCCcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 225 ~~~~~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
-...|+|+ -.+.+.+ +-+.++|+++-+.++|+..|--+
T Consensus 85 ---~~~ad~Vi-Eav~E~l--~iK~~lf~~l~~~~~~~aIlaSN 122 (319)
T 3ado_A 85 ---VEGVVHIQ-ECVPENL--DLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp ---TTTEEEEE-ECCCSCH--HHHHHHHHHHHTTCCSSSEEEEC
T ss_pred ---hccCcEEe-eccccHH--HHHHHHHHHHHHHhhhcceeehh
Confidence 12456654 2222222 22458999999999998877544
No 486
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=55.50 E-value=31 Score=29.15 Aligned_cols=85 Identities=9% Similarity=-0.052 Sum_probs=49.6
Q ss_pred eeeEeeccc-ch-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeEec
Q 024100 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (272)
Q Consensus 160 ~VLDiGcGt-G~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIvs~ 237 (272)
+|.=||+|. |. ++..| .+ +.+|.++|.+++-++...+. . +... +..+. -...|+|+..
T Consensus 3 ~i~iiG~G~~G~~~a~~l-~~-g~~V~~~~~~~~~~~~~~~~-g------------~~~~--~~~~~---~~~~D~vi~~ 62 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHL-AR-RFPTLVWNRTFEKALRHQEE-F------------GSEA--VPLER---VAEARVIFTC 62 (289)
T ss_dssp CEEEECCSTTHHHHHHHH-HT-TSCEEEECSSTHHHHHHHHH-H------------CCEE--CCGGG---GGGCSEEEEC
T ss_pred eEEEEcccHHHHHHHHHH-hC-CCeEEEEeCCHHHHHHHHHC-C------------Cccc--CHHHH---HhCCCEEEEe
Confidence 466778884 44 34434 56 77899999988776665543 0 1111 12111 1358888865
Q ss_pred hhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 238 WCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 238 ~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
-.- +.....+++++...+++|..+++.
T Consensus 63 v~~----~~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 63 LPT----TREVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp CSS----HHHHHHHHHHHTTTCCTTEEEEEC
T ss_pred CCC----hHHHHHHHHHHHhhCCCCCEEEEC
Confidence 431 112445677777788888777654
No 487
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=55.41 E-value=37 Score=28.58 Aligned_cols=106 Identities=12% Similarity=0.104 Sum_probs=58.8
Q ss_pred CCeeeEeecccc--hHHHHHHHhcCCcEEEEeCC---HHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-----
Q 024100 158 HLVALDCGSGIG--RITKNLLIRYFNEVDLLEPV---SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~~t~~LLa~~~~~v~~vD~S---~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~----- 227 (272)
+.++|=.|++.| .-....|++.+.+|.+++.+ ..-++...+.+.. ...++.++.+|+.+...-
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED-------QGAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT-------TTCEEEEEECCCCSHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHH
Confidence 447777776544 32222335678899998643 3445544444422 235788999998764310
Q ss_pred -----CCcceeeEechhh------hhcChhhHHHH-----------HHHHHHhcccCcEEEEecC
Q 024100 228 -----TGRYDVIWVQWCI------GHLTDDDFVSF-----------FKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 -----~~~fDlIvs~~vl------~hl~d~~~~~~-----------l~~~~r~LkpgG~liv~E~ 270 (272)
-+..|++|.+-.+ ...+.+++... .+.+...++++|.++..-|
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 1368998865432 23334443332 2333455567788776543
No 488
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=55.36 E-value=6.6 Score=35.11 Aligned_cols=85 Identities=18% Similarity=0.192 Sum_probs=47.2
Q ss_pred ecccchHHHHHHHhc-CCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEE----------EeCCCCCCCCCCccee
Q 024100 165 GSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF----------CVPLQDFTPETGRYDV 233 (272)
Q Consensus 165 GcGtG~~t~~LLa~~-~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~----------~~d~~~~~~~~~~fDl 233 (272)
.++.|.+.. ++.+. +..|.+|| .++.. ..+.|+++ ..|+.+-. ..++||+
T Consensus 149 ~~~~~~~~~-~~~k~~g~~vl~v~----------~~~~~-------p~k~v~wi~Pi~GAt~~~~lDfg~p~-~~~k~Dv 209 (320)
T 2hwk_A 149 EHPQSDFSS-FVSKLKGRTVLVVG----------EKLSV-------PGKMVDWLSDRPEATFRARLDLGIPG-DVPKYDI 209 (320)
T ss_dssp CCCCCCCHH-HHHTSSCSEEEEEE----------SCCCC-------TTSEEEEEESSTTCSEECCGGGCSCT-TSCCEEE
T ss_pred ccCCCCHHH-HHhhCCCcEEEEEe----------ccccc-------CCceeEeeccCCCceeecccccCCcc-ccCcCCE
Confidence 577888888 54564 55666663 11111 12334443 44443322 2257999
Q ss_pred eEech----hhhh-c--Chhh-HH-HHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQW----CIGH-L--TDDD-FV-SFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~----vl~h-l--~d~~-~~-~~l~~~~r~LkpgG~liv~ 268 (272)
|++.. .-|| - .|.. +. -++....++|+|||.+++.
T Consensus 210 V~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~K 253 (320)
T 2hwk_A 210 IFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSI 253 (320)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEE
T ss_pred EEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 99753 4455 2 2222 11 2455566899999999864
No 489
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=54.98 E-value=32 Score=28.86 Aligned_cols=76 Identities=18% Similarity=0.137 Sum_probs=45.9
Q ss_pred CCeeeEeecccc---hHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC-------
Q 024100 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG---~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 227 (272)
+.++|=.|++.| .++..| ++.+.+|.+++.++.-++...+.+... ....++.++.+|+.+...-
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l-~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRL-AAEGAKLSLVDVSSEGLEASKAAVLET-----APDAEVLTTVADVSDEAQVEAYVTAT 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHHHHHHHH-----CTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHHHHHhh-----cCCceEEEEEccCCCHHHHHHHHHHH
Confidence 346777776543 233333 567889999998887766655544211 0123678888998664210
Q ss_pred ---CCcceeeEechh
Q 024100 228 ---TGRYDVIWVQWC 239 (272)
Q Consensus 228 ---~~~fDlIvs~~v 239 (272)
-+..|+++.+-.
T Consensus 87 ~~~~g~id~lv~nAg 101 (267)
T 1iy8_A 87 TERFGRIDGFFNNAG 101 (267)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 025799886643
No 490
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=54.78 E-value=31 Score=28.55 Aligned_cols=65 Identities=15% Similarity=0.079 Sum_probs=35.6
Q ss_pred CeeeEeecccc--h-HHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCC
Q 024100 159 LVALDCGSGIG--R-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (272)
Q Consensus 159 ~~VLDiGcGtG--~-~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~ 224 (272)
.+||=.|++.| . ++..| ++.+.+|.+++-++.-++...+.+............++.++.+|+.+.
T Consensus 8 k~vlITGasggiG~~la~~l-~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 75 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRL-AGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEA 75 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSH
T ss_pred CEEEEECCCChHHHHHHHHH-HHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCH
Confidence 46777776433 2 33333 466789999998887766655544221000000014678888998764
No 491
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=54.44 E-value=30 Score=29.72 Aligned_cols=106 Identities=15% Similarity=0.098 Sum_probs=59.3
Q ss_pred CCeeeEeecccc--hHHHHHHHhcCCcEEEEeCC--HHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC------
Q 024100 158 HLVALDCGSGIG--RITKNLLIRYFNEVDLLEPV--SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~~t~~LLa~~~~~v~~vD~S--~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 227 (272)
+.++|=.|++.| .-....|++.+.+|.+++.+ ....+...+.+.. ...++.++.+|+.+...-
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-------CGRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-------TTCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-------cCCcEEEEEecCCCHHHHHHHHHH
Confidence 457888886543 33222335778899998865 3344444444322 234678888888664210
Q ss_pred ----CCcceeeEechhh-------hhcChhhHHHH-----------HHHHHHhcccCcEEEEecC
Q 024100 228 ----TGRYDVIWVQWCI-------GHLTDDDFVSF-----------FKRAKENIARSGTFLLSHS 270 (272)
Q Consensus 228 ----~~~fDlIvs~~vl-------~hl~d~~~~~~-----------l~~~~r~LkpgG~liv~E~ 270 (272)
-+..|+++.+-.. ..++.+++... ++.+...++++|.||..-|
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 1368998865433 22333333332 3344456677888876544
No 492
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=54.30 E-value=19 Score=33.85 Aligned_cols=87 Identities=14% Similarity=0.008 Sum_probs=50.8
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceeeE
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlIv 235 (272)
.+.+|+=+|+| .|......+...+.+|.++|.++.-...|.. . ... ..++++. -...|+|+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~-~------------G~~--v~~Leea---l~~ADIVi 280 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM-D------------GFR--LVKLNEV---IRQVDIVI 280 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T------------TCE--ECCHHHH---TTTCSEEE
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH-c------------CCE--eccHHHH---HhcCCEEE
Confidence 56789999998 4655555555567899999999864433332 1 011 1233222 13578888
Q ss_pred echhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 236 VQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 236 s~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
..-.-.|+-+. +..+.+++|++++..
T Consensus 281 ~atgt~~lI~~-------e~l~~MK~gailINv 306 (435)
T 3gvp_A 281 TCTGNKNVVTR-------EHLDRMKNSCIVCNM 306 (435)
T ss_dssp ECSSCSCSBCH-------HHHHHSCTTEEEEEC
T ss_pred ECCCCcccCCH-------HHHHhcCCCcEEEEe
Confidence 74222232222 345678899888754
No 493
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=54.15 E-value=54 Score=28.36 Aligned_cols=94 Identities=11% Similarity=-0.013 Sum_probs=50.6
Q ss_pred CCCeeeEeecc-cchHHHHHHHhcC-CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCcceee
Q 024100 157 QHLVALDCGSG-IGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (272)
Q Consensus 157 ~~~~VLDiGcG-tG~~t~~LLa~~~-~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDlI 234 (272)
.+.++|=+|+| .|+.....|.+.+ .+|++++-+++-.+...+.+.. ..+. ..+++++.. ..+|+|
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---------~~~~--~~~~~~l~~--~~~Div 185 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---------SRLR--ISRYEALEG--QSFDIV 185 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---------TTEE--EECSGGGTT--CCCSEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---------CCee--EeeHHHhcc--cCCCEE
Confidence 45689999986 3333333334566 5899998887654444444421 1222 234444421 479999
Q ss_pred EechhhhhcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 235 WVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 235 vs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
++.-......+.. .+. ...++++..+++.
T Consensus 186 InaTp~gm~~~~~---~i~--~~~l~~~~~V~Dl 214 (272)
T 3pwz_A 186 VNATSASLTADLP---PLP--ADVLGEAALAYEL 214 (272)
T ss_dssp EECSSGGGGTCCC---CCC--GGGGTTCSEEEES
T ss_pred EECCCCCCCCCCC---CCC--HHHhCcCCEEEEe
Confidence 9765443322110 000 2356777777653
No 494
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=54.05 E-value=43 Score=29.34 Aligned_cols=87 Identities=10% Similarity=-0.083 Sum_probs=50.1
Q ss_pred CeeeEeecc-cchHHHHHHHhcC-CcEEEEeCCH-------HHHHHHHHhccccCCCCCCCCCceEEEEe-CCCCCCCCC
Q 024100 159 LVALDCGSG-IGRITKNLLIRYF-NEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPET 228 (272)
Q Consensus 159 ~~VLDiGcG-tG~~t~~LLa~~~-~~v~~vD~S~-------~mld~A~~~l~~~~~~~~~~~~~v~~~~~-d~~~~~~~~ 228 (272)
.+|.=||+| .|......+++.+ .+|.++|.++ ..++.+.+. .+ .. +..+.-
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~-------------g~---~~~s~~e~~--- 85 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL-------------GV---EPLDDVAGI--- 85 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT-------------TC---EEESSGGGG---
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC-------------CC---CCCCHHHHH---
Confidence 367788887 3433333335667 7999999887 333333221 11 22 333221
Q ss_pred CcceeeEechhhhhcChhhHHHHHHHHHHhcccCcEEEEec
Q 024100 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKENIARSGTFLLSH 269 (272)
Q Consensus 229 ~~fDlIvs~~vl~hl~d~~~~~~l~~~~r~LkpgG~liv~E 269 (272)
...|+|++.- +++...+.+..+...|+||..+++.-
T Consensus 86 ~~aDvVi~av-----p~~~~~~~~~~i~~~l~~~~ivv~~s 121 (317)
T 4ezb_A 86 ACADVVLSLV-----VGAATKAVAASAAPHLSDEAVFIDLN 121 (317)
T ss_dssp GGCSEEEECC-----CGGGHHHHHHHHGGGCCTTCEEEECC
T ss_pred hcCCEEEEec-----CCHHHHHHHHHHHhhcCCCCEEEECC
Confidence 2578877643 23334456677888888888777643
No 495
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=53.85 E-value=31 Score=29.07 Aligned_cols=75 Identities=9% Similarity=0.032 Sum_probs=51.3
Q ss_pred CCeeeEeec----ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC-------
Q 024100 158 HLVALDCGS----GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (272)
Q Consensus 158 ~~~VLDiGc----GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~------- 226 (272)
++++|=-|+ |.|.-.-..|++.+.+|.+++.+++-++.+.+.+... ....+.++.+|+.+..-
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL------NQPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG------TCSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCCcEEEEEccCCCHHHHHHHHHH
Confidence 457777784 6776554455788999999999888777777766432 23467888999865421
Q ss_pred ---CCCcceeeEech
Q 024100 227 ---ETGRYDVIWVQW 238 (272)
Q Consensus 227 ---~~~~fDlIvs~~ 238 (272)
.-++.|+++.+-
T Consensus 80 ~~~~~G~iD~lvnnA 94 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSI 94 (256)
T ss_dssp HHHHHCCCSEEEECC
T ss_pred HHHHhCCCCEEEecc
Confidence 014689888653
No 496
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=53.82 E-value=94 Score=25.70 Aligned_cols=69 Identities=14% Similarity=0.117 Sum_probs=43.4
Q ss_pred eeEeec--ccchHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCC----------CC
Q 024100 161 ALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----------ET 228 (272)
Q Consensus 161 VLDiGc--GtG~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~----------~~ 228 (272)
+|=.|+ |.|......|++.+.+|.+++-++.-++...+.+. ..+.++.+|+.+... .-
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 72 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----------DNLYIAQLDVRNRAAIEEMLASLPAEW 72 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHTSCTTT
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------CceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 444454 45544444445778899999988877766655542 257788888865320 11
Q ss_pred CcceeeEechh
Q 024100 229 GRYDVIWVQWC 239 (272)
Q Consensus 229 ~~fDlIvs~~v 239 (272)
+..|+++.+-.
T Consensus 73 g~iD~lvnnAg 83 (248)
T 3asu_A 73 CNIDILVNNAG 83 (248)
T ss_dssp CCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36899986543
No 497
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=53.37 E-value=33 Score=29.54 Aligned_cols=78 Identities=12% Similarity=0.114 Sum_probs=45.8
Q ss_pred CCeeeEeecccc--hHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCC--------
Q 024100 158 HLVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------- 227 (272)
Q Consensus 158 ~~~VLDiGcGtG--~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~-------- 227 (272)
+.++|=.|++.| .-....|++.+.+|.+++-++.-++...+.+.... .....+.++.+|+.+...-
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAG----VPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 346777776433 32222335678899999998877766555542210 0012678889998664210
Q ss_pred --CCcceeeEechh
Q 024100 228 --TGRYDVIWVQWC 239 (272)
Q Consensus 228 --~~~fDlIvs~~v 239 (272)
-+..|++|.+-.
T Consensus 102 ~~~g~iD~lvnnAG 115 (297)
T 1xhl_A 102 AKFGKIDILVNNAG 115 (297)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 026899887643
No 498
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=53.15 E-value=35 Score=30.03 Aligned_cols=97 Identities=12% Similarity=-0.028 Sum_probs=50.7
Q ss_pred CCeeeEeeccc-ch-HHHHHHHhcC--CcEEEEeCCHHHHHHHHHhccccCCCCCCCCCceEEEEeCCCCCCCCCCccee
Q 024100 158 HLVALDCGSGI-GR-ITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (272)
Q Consensus 158 ~~~VLDiGcGt-G~-~t~~LLa~~~--~~v~~vD~S~~mld~A~~~l~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fDl 233 (272)
..+|.=+|+|. |. ++..+ +... .++.++|.+++....+.+.... ..+++... .|.+++ ...|+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l-~~~g~~~ev~L~Di~~~~~g~a~dl~~~-------~~~~i~~t-~d~~~l----~~aD~ 80 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAI-SAKGIADRLVLLDLSEGTKGATMDLEIF-------NLPNVEIS-KDLSAS----AHSKV 80 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHHTCCSEEEEECCC-----CHHHHHHH-------TCTTEEEE-SCGGGG----TTCSE
T ss_pred CCEEEEECCCHHHHHHHHHH-HhcCCCCEEEEEcCCcchHHHHHHHhhh-------cCCCeEEe-CCHHHH----CCCCE
Confidence 35788999995 43 44434 3443 4899999988533344333211 11244442 444332 35899
Q ss_pred eEechhhh----------hcChhhHHHHHHHHHHhcccCcEEEEe
Q 024100 234 IWVQWCIG----------HLTDDDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 234 Ivs~~vl~----------hl~d~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
|+..--.. .-+-+-+.++++++.+.. |++.+++.
T Consensus 81 Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 81 VIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp EEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred EEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 98764111 000122446777777765 99987654
No 499
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=53.06 E-value=84 Score=27.04 Aligned_cols=101 Identities=9% Similarity=-0.020 Sum_probs=51.6
Q ss_pred CCeeeEeeccc-chHHHHHHHhcCC--cEEEEeCCHHHHHH-HHHhccccCCCCCCCCCceEEEEe-CCCCCCCCCCcce
Q 024100 158 HLVALDCGSGI-GRITKNLLIRYFN--EVDLLEPVSHFLDA-ARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYD 232 (272)
Q Consensus 158 ~~~VLDiGcGt-G~~t~~LLa~~~~--~v~~vD~S~~mld~-A~~~l~~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD 232 (272)
..+|.=+|+|. |......++..+. +|.++|.++..++. +.+...... ......+... +.+.+ ...|
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~----~~aD 77 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS-----FYPTVSIDGSDDPEIC----RDAD 77 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG-----GSTTCEEEEESCGGGG----TTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhh-----hcCCeEEEeCCCHHHh----CCCC
Confidence 45889999973 4433334445555 89999999866552 221100000 0012333332 32221 3589
Q ss_pred eeEechhhhhcCh-----------hhHHHHHHHHHHhcccCcEEEEe
Q 024100 233 VIWVQWCIGHLTD-----------DDFVSFFKRAKENIARSGTFLLS 268 (272)
Q Consensus 233 lIvs~~vl~hl~d-----------~~~~~~l~~~~r~LkpgG~liv~ 268 (272)
+|+..--....+. +-+..+++.+... .|++.++..
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~ 123 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLI 123 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEe
Confidence 9887653222211 1122556666664 688887654
No 500
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=51.63 E-value=45 Score=28.92 Aligned_cols=124 Identities=21% Similarity=0.299 Sum_probs=64.5
Q ss_pred CcchhhhhHHHHHHHHHhccCCCccCCCCCeeeEeeccc--chHHHHHHHhcCCcEEEEeCCHHHHHHHHHhccccCCCC
Q 024100 130 VNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMA 207 (272)
Q Consensus 130 ~s~~d~~~s~~~L~~ll~~~l~~~~~~~~~~VLDiGcGt--G~~t~~LLa~~~~~v~~vD~S~~mld~A~~~l~~~~~~~ 207 (272)
.|..|+.....|+..+-. .+ ++..+|=-|++. |+-+-..|++.+.+|.+++.+++-++.+.+.+.
T Consensus 8 ~s~~~~~~~n~~~~~Ms~-rL------~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g------ 74 (273)
T 4fgs_A 8 SSGVDLGTENLYFQSMTQ-RL------NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG------ 74 (273)
T ss_dssp -----------------C-TT------TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------
T ss_pred ccCCCccccccchhhhcc-hh------CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC------
Confidence 344455444445544422 12 345677777654 444444446889999999999998888777652
Q ss_pred CCCCCceEEEEeCCCCCCC----------CCCcceeeEechh------hhhcChhhHHHHH-----------HHHHHhcc
Q 024100 208 PDMHKATNFFCVPLQDFTP----------ETGRYDVIWVQWC------IGHLTDDDFVSFF-----------KRAKENIA 260 (272)
Q Consensus 208 ~~~~~~v~~~~~d~~~~~~----------~~~~fDlIvs~~v------l~hl~d~~~~~~l-----------~~~~r~Lk 260 (272)
.+..++.+|+.+..- .-++.|+++.+-. +..++++++.+.+ +.+...++
T Consensus 75 ----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~ 150 (273)
T 4fgs_A 75 ----GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA 150 (273)
T ss_dssp ----TTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE
T ss_pred ----CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 356677888865421 0136898886542 3334444444333 22335667
Q ss_pred cCcEEEEecC
Q 024100 261 RSGTFLLSHS 270 (272)
Q Consensus 261 pgG~liv~E~ 270 (272)
.+|.+|..-|
T Consensus 151 ~~G~IInisS 160 (273)
T 4fgs_A 151 RGSSVVLTGS 160 (273)
T ss_dssp EEEEEEEECC
T ss_pred hCCeEEEEee
Confidence 7787765543
Done!