BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024101
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49814|BCH2_CAPAN Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum
annuum GN=CA2 PE=2 SV=1
Length = 316
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/256 (74%), Positives = 208/256 (81%), Gaps = 9/256 (3%)
Query: 18 TTKLQPSSLLTTKPAPL------FAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQI 71
T+ + S L KP P P + G RR SFTVCFVLE+ K TQ
Sbjct: 22 TSYYRHSPFLGPKPTPTTPSVYPITPFSPNLGSILRCRRRP--SFTVCFVLEDDKFKTQF 79
Query: 72 ETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWW 131
E E+ E + QIS A R+AEKLARK+SERFTYLVAAVMSSFGITSMAVMAVYYRF+W
Sbjct: 80 EAGEEDIEMKIEEQIS-ATRLAEKLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYW 138
Query: 132 QMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELN 191
QMEGGEVP +EMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHH+PREGPFELN
Sbjct: 139 QMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHKPREGPFELN 198
Query: 192 DVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPI 251
DVFAIINAVPAIALL +GFFHKGL+PGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGP+
Sbjct: 199 DVFAIINAVPAIALLDYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPV 258
Query: 252 ADVPYFRRVAAAHQVN 267
A+VPY R+VAAAH ++
Sbjct: 259 ANVPYLRKVAAAHSLH 274
>sp|B3SGL0|BCH_GENLU Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY
PE=2 SV=1
Length = 320
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/224 (77%), Positives = 200/224 (89%), Gaps = 7/224 (3%)
Query: 51 RKLNSFTVCFVLEEKKQSTQIETFTEEEE------EESGTQISTAA-RVAEKLARKRSER 103
R TVCFVLEEK+ ++ +++++ ++ +IS +A ++A+KLARK+SER
Sbjct: 56 RSKPRLTVCFVLEEKELRGKLVVASDDDDGAGEVRKQREKEISASAEKLAQKLARKKSER 115
Query: 104 FTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARW 163
FTYLVAAVMSSFGITSMAV++VYYRF WQMEGGE+PL+EMFGTFALSVGAAVGMEFWARW
Sbjct: 116 FTYLVAAVMSSFGITSMAVLSVYYRFSWQMEGGEIPLSEMFGTFALSVGAAVGMEFWARW 175
Query: 164 AHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGA 223
AH+ALWHASLWHMHESHH+PREGPFELND+FAIINAVPAIALLS+GFFHKGL+PGLCFGA
Sbjct: 176 AHEALWHASLWHMHESHHKPREGPFELNDIFAIINAVPAIALLSYGFFHKGLIPGLCFGA 235
Query: 224 GLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
GLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAH ++
Sbjct: 236 GLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHTLH 279
>sp|Q9LTG0|BCH2_ARATH Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis
thaliana GN=BETA-OHASE 2 PE=2 SV=1
Length = 303
Score = 353 bits (905), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 165/223 (73%), Positives = 193/223 (86%), Gaps = 2/223 (0%)
Query: 45 FNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERF 104
FNG RRK+ TVCFV+EE+KQS+ ++ + E S ++I +R+ +K +K+SERF
Sbjct: 37 FNGFRRRKI--LTVCFVVEERKQSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERF 94
Query: 105 TYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWA 164
TYL+AAVMSSFGITSMA+MAVYYRF WQM+GGEV + EMFGTFALSVGAAVGMEFWARWA
Sbjct: 95 TYLIAAVMSSFGITSMAIMAVYYRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWA 154
Query: 165 HKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAG 224
H+ALWH SLW+MHESHH+PREG FELNDVFAI NAVPAI LL +GF +KGLVPGLCFGAG
Sbjct: 155 HRALWHDSLWNMHESHHKPREGAFELNDVFAITNAVPAIGLLYYGFLNKGLVPGLCFGAG 214
Query: 225 LGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
LGIT+FGMAYMFVHDGLVHKRFPVGPIA+VPY R+VAAAHQ++
Sbjct: 215 LGITMFGMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLH 257
>sp|Q9SZZ8|BCH1_ARATH Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis
thaliana GN=BETA-OHASE 1 PE=1 SV=1
Length = 310
Score = 352 bits (902), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 190/219 (86%), Gaps = 3/219 (1%)
Query: 52 KLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQIST---AARVAEKLARKRSERFTYLV 108
+ F+VC+V+EE++Q++ IE E S I A R+AEKL RK+SER TYL+
Sbjct: 41 RFKRFSVCYVVEERRQNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLI 100
Query: 109 AAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKAL 168
AA++SSFGITSMAVMAVYYRF WQMEGGE+ + EMFGTFALSVGAAVGMEFWARWAH+AL
Sbjct: 101 AAMLSSFGITSMAVMAVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRAL 160
Query: 169 WHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGIT 228
WHASLW+MHESHH+PREGPFELNDVFAI+NA PAI LLS+GFF+KGLVPGLCFGAGLGIT
Sbjct: 161 WHASLWNMHESHHKPREGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGLCFGAGLGIT 220
Query: 229 VFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
VFG+AYMFVHDGLVHKRFPVGPIADVPY R+VAAAHQ++
Sbjct: 221 VFGIAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLH 259
>sp|O49815|BCH1_CAPAN Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum
GN=CA1 PE=1 SV=1
Length = 315
Score = 350 bits (897), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 175/275 (63%), Positives = 205/275 (74%), Gaps = 10/275 (3%)
Query: 1 MAVGLLAAIVPKPFCLLTTKL-QPSSLLTTKPAPLFAPLGTHRGFFNGKNRRKLNSFTVC 59
MA + + + CL P T P F+PL + ++RRK C
Sbjct: 1 MAAEISISASSRAICLQRNPFPAPKYFATAPPLLFFSPLTCNLDAIL-RSRRK-PRLAAC 58
Query: 60 FVLEEKK-------QSTQIETFTEEEEEESGTQISTAARVAEKLARKRSERFTYLVAAVM 112
FVL++ K + + E +E E E+ + S A R+AEK ARK+SERFTYLVAAVM
Sbjct: 59 FVLKDDKLYTAQSGKQSDTEAIGDEIEVETNEEKSLAVRLAEKFARKKSERFTYLVAAVM 118
Query: 113 SSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTFALSVGAAVGMEFWARWAHKALWHAS 172
SS GITSMAV++VYYRF WQMEGGE+P +EMF TFAL+ GAA+GME+WARWAH+ALWHAS
Sbjct: 119 SSLGITSMAVISVYYRFSWQMEGGEMPFSEMFCTFALAFGAAIGMEYWARWAHRALWHAS 178
Query: 173 LWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGM 232
LWHMHESHHRPREGPFELND+FAIINAVPAIA SFGF HKGL+PG+CFGAGLGITVFGM
Sbjct: 179 LWHMHESHHRPREGPFELNDIFAIINAVPAIAFFSFGFNHKGLIPGICFGAGLGITVFGM 238
Query: 233 AYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
AYMFVHDGLVHKRFPVGPIA VPYF+RVAAAHQ++
Sbjct: 239 AYMFVHDGLVHKRFPVGPIAKVPYFQRVAAAHQLH 273
>sp|Q9SPK6|BCH_HAEPL Beta-carotene 3-hydroxylase, chloroplastic (Fragment)
OS=Haematococcus pluvialis GN=CRTZ PE=2 SV=1
Length = 322
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 3/168 (1%)
Query: 103 RFTYLVAAVMSSFGITSMAVMAVYYRFWWQME-GGEVPLAEMFGTFALSVGAAVGMEFWA 161
+ +Y AA+ +S G++ +A+ A Y RF M GG VP E+ GT L VG A+GME +A
Sbjct: 114 QLSYQAAAIAASIGVSGIAIFATYLRFAMHMTVGGAVPWGEVAGTLLLVVGGALGMEMYA 173
Query: 162 RWAHKALWHASL--WHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGL 219
R+AHKA+WH S W +H+SHH PR GPFE ND+FAIIN +PA+ L +FGF+ ++
Sbjct: 174 RYAHKAIWHESPLGWLLHKSHHTPRTGPFEANDLFAIINGLPAMLLCTFGFWLPNVLGAA 233
Query: 220 CFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVN 267
CFGAGLGIT++GMAYMFVHDGLVH+RFP GPIA +PY +R+ AHQ++
Sbjct: 234 CFGAGLGITLYGMAYMFVHDGLVHRRFPTGPIAGLPYMKRLTVAHQLH 281
>sp|Q01332|CRTZ_ESCVU Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=3 SV=1
Length = 176
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 153 AAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFH 212
+ + ME A + H+ + H W HESHH PR+G FELND+FA++ A AIAL++ G
Sbjct: 11 SVIAMEGIAAFTHRYIMHGWGWRWHESHHTPRKGVFELNDLFAVVFAGVAIALIAVGT-- 68
Query: 213 KGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQI 270
G+ P G G+ TV+G+ Y VHDGLVH+R+P I Y +R+ AH+++ +
Sbjct: 69 AGVWPLQWIGCGM--TVYGLLYFLVHDGLVHQRWPFHWIPRRGYLKRLYVAHRLHHAV 124
>sp|P21688|CRTZ_PANAN Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=3 SV=1
Length = 175
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 155 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKG 214
+GME A AHK + H W H SHH PR+G FE+ND++A++ A +I L+ G G
Sbjct: 15 IGMEVIAALAHKYIMHGWGWGWHLSHHEPRKGAFEVNDLYAVVFAALSILLIYLG--STG 72
Query: 215 LVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQVNDQI 270
+ P GAG+ T +G+ Y VHDGLVH+R+P I Y +R+ AH+++ +
Sbjct: 73 MWPLQWIGAGM--TAYGLLYFMVHDGLVHQRWPFRYIPRKGYLKRLYMAHRMHHAV 126
>sp|Q44262|CRTZ_PARS1 Beta-carotene hydroxylase OS=Paracoccus sp. (strain PC1) GN=crtZ
PE=3 SV=1
Length = 162
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 147 FALSVGAAVGMEFWARWAHKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIAL 205
F + V + ME A H+ + H L W H+SHH + E ND++ ++ AV A L
Sbjct: 4 FLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGVVFAVLATIL 63
Query: 206 LSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQ 265
+ G + P L + A LG+TV+G+ Y +HDGLVH+R+P I YFRR+ AH+
Sbjct: 64 FTVGAY---WWPVLWWIA-LGMTVYGLIYFILHDGLVHQRWPFRYIPRRGYFRRLYQAHR 119
Query: 266 VNDQI 270
++ +
Sbjct: 120 LHHAV 124
>sp|P54973|CRTZ_PARSN Beta-carotene hydroxylase OS=Paracoccus sp. (strain N81106 / MBIC
01143) GN=crtZ PE=3 SV=1
Length = 162
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 146 TFALSVGAAVGMEFWARWAHKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIA 204
F + V + ME A H+ + H L W H+SHH + E ND++ ++ AV A
Sbjct: 3 NFLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGLVFAVIATV 62
Query: 205 LLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAH 264
L + G+ P L + A LG+TV+G+ Y +HDGLVH+R+P I Y RR+ AH
Sbjct: 63 LFTVGWI---WAPVLWWIA-LGMTVYGLIYFVLHDGLVHQRWPFRYIPRKGYARRLYQAH 118
Query: 265 QVNDQI 270
+++ +
Sbjct: 119 RLHHAV 124
>sp|Q5RBN1|FND3A_PONAB Fibronectin type-III domain-containing protein 3A OS=Pongo abelii
GN=FNDC3A PE=2 SV=1
Length = 1142
Score = 32.3 bits (72), Expect = 3.9, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 29 TKPAPLFAPLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIETFTEEEEEESGTQIST 88
+ P +P+ H G G+N +N+ + + K TQ++T EE++EE+ +
Sbjct: 150 SSPQKCPSPINEHNGLIKGQNAGGINTGSAKIKSGKGKGGTQVDTEIEEKDEETKAFEAL 209
Query: 89 AARVAEKLARKRSERFTYLVAAVMSSF 115
+ + + +A R L + SS
Sbjct: 210 LSNIVKPVASDIQARTVVLTWSPPSSL 236
>sp|Q2V3R1|FB346_ARATH F-box protein At3g44326 OS=Arabidopsis thaliana GN=At3g44326 PE=2
SV=1
Length = 363
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 26/147 (17%)
Query: 37 PLGTHRGFFNGKNRRKLNSFTVCFVLEEKKQSTQIE--------TFTEEEEEESGTQIST 88
P+ HR + G+ K +S FV+ KK+S Q+E F EEE + QI
Sbjct: 205 PVSVHRHWLTGEVHVKFSSI---FVVGNKKRSEQVEFTVTVVLAVFNRREEETAVMQIRE 261
Query: 89 AARVAE-KLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFWWQMEGGEVPLAEMFGTF 147
+ VAE K R + + + +A M + RF GGE E + +
Sbjct: 262 VSLVAEDKDGRNLGGKVSLEIL----------VAAMGMKRRF---RAGGEEEGKEKYIEY 308
Query: 148 ALSVGAAVGMEFWARWAHKALWHASLW 174
A M+ W R A+ A+ W
Sbjct: 309 MERKTAKAEMK-WRRGKETAMETAACW 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,229,715
Number of Sequences: 539616
Number of extensions: 4121663
Number of successful extensions: 16179
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 16158
Number of HSP's gapped (non-prelim): 25
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)