Query 024103
Match_columns 272
No_of_seqs 151 out of 1440
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 09:00:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024103.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024103hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0190 FolD 5,10-methylene-te 100.0 5.5E-84 1.2E-88 581.7 28.3 259 2-271 24-282 (283)
2 PRK14171 bifunctional 5,10-met 100.0 5.2E-83 1.1E-87 581.3 28.1 256 4-269 28-283 (288)
3 PLN02897 tetrahydrofolate dehy 100.0 3.8E-83 8.3E-88 592.0 27.5 265 3-270 81-345 (345)
4 PLN02616 tetrahydrofolate dehy 100.0 6.4E-83 1.4E-87 592.7 28.0 266 3-271 98-363 (364)
5 PRK14170 bifunctional 5,10-met 100.0 8.1E-83 1.8E-87 579.1 28.0 256 5-271 28-283 (284)
6 PRK14168 bifunctional 5,10-met 100.0 2.5E-82 5.4E-87 579.5 28.1 266 3-271 28-297 (297)
7 PRK14187 bifunctional 5,10-met 100.0 2.4E-82 5.2E-87 578.4 27.7 261 4-270 28-288 (294)
8 PRK14166 bifunctional 5,10-met 100.0 3.2E-82 6.9E-87 575.1 28.2 255 5-269 27-281 (282)
9 PRK14169 bifunctional 5,10-met 100.0 3.5E-82 7.5E-87 574.9 28.3 254 6-270 28-281 (282)
10 PLN02516 methylenetetrahydrofo 100.0 4E-82 8.6E-87 578.2 28.5 265 3-270 34-298 (299)
11 PRK14182 bifunctional 5,10-met 100.0 4.3E-82 9.3E-87 573.8 28.0 254 5-269 27-281 (282)
12 PRK14185 bifunctional 5,10-met 100.0 7E-82 1.5E-86 575.2 28.0 260 3-268 26-290 (293)
13 PRK14190 bifunctional 5,10-met 100.0 1.3E-81 2.7E-86 572.2 28.0 254 6-270 30-283 (284)
14 PRK14180 bifunctional 5,10-met 100.0 1.2E-81 2.5E-86 571.5 27.6 255 4-269 27-281 (282)
15 PRK14167 bifunctional 5,10-met 100.0 1.6E-81 3.6E-86 574.1 28.2 261 5-271 28-292 (297)
16 PRK14172 bifunctional 5,10-met 100.0 1E-81 2.2E-86 570.8 26.4 248 7-266 31-278 (278)
17 PRK14184 bifunctional 5,10-met 100.0 1.5E-81 3.2E-86 571.8 26.9 256 4-271 27-286 (286)
18 PRK14181 bifunctional 5,10-met 100.0 1.7E-81 3.8E-86 571.1 27.2 259 5-268 23-285 (287)
19 PRK14186 bifunctional 5,10-met 100.0 2.5E-81 5.5E-86 572.9 27.6 261 3-270 27-287 (297)
20 PRK14183 bifunctional 5,10-met 100.0 6.3E-81 1.4E-85 565.9 28.1 252 5-267 28-279 (281)
21 PRK14193 bifunctional 5,10-met 100.0 1.1E-80 2.4E-85 565.5 28.0 254 5-270 29-284 (284)
22 PRK14189 bifunctional 5,10-met 100.0 2E-80 4.2E-85 564.6 28.3 255 6-271 30-284 (285)
23 PRK14177 bifunctional 5,10-met 100.0 1.1E-80 2.4E-85 565.1 26.6 251 4-269 29-279 (284)
24 PRK14176 bifunctional 5,10-met 100.0 1.9E-80 4E-85 564.3 27.2 253 4-268 34-286 (287)
25 PRK14191 bifunctional 5,10-met 100.0 2.1E-80 4.4E-85 564.0 27.1 255 4-269 27-281 (285)
26 PRK10792 bifunctional 5,10-met 100.0 2E-80 4.3E-85 564.1 26.7 256 4-270 29-284 (285)
27 PRK14173 bifunctional 5,10-met 100.0 6E-80 1.3E-84 561.5 27.3 255 5-269 26-282 (287)
28 PRK14179 bifunctional 5,10-met 100.0 8.5E-80 1.8E-84 560.2 27.6 255 4-269 28-282 (284)
29 PRK14175 bifunctional 5,10-met 100.0 1.7E-79 3.8E-84 559.1 27.7 256 5-271 29-284 (286)
30 PRK14174 bifunctional 5,10-met 100.0 4E-79 8.7E-84 558.8 28.4 264 4-270 27-294 (295)
31 PRK14178 bifunctional 5,10-met 100.0 1.5E-78 3.3E-83 550.3 26.3 252 5-268 23-274 (279)
32 PRK14194 bifunctional 5,10-met 100.0 6.6E-78 1.4E-82 551.3 28.6 256 5-270 30-287 (301)
33 PRK14188 bifunctional 5,10-met 100.0 7.8E-76 1.7E-80 538.1 28.8 261 4-269 28-289 (296)
34 KOG4230 C1-tetrahydrofolate sy 100.0 3.5E-75 7.6E-80 556.8 24.1 263 4-269 30-292 (935)
35 PRK14192 bifunctional 5,10-met 100.0 2E-73 4.4E-78 520.8 26.5 255 4-270 29-283 (283)
36 KOG0089 Methylenetetrahydrofol 100.0 5.9E-71 1.3E-75 489.3 21.7 267 1-270 31-307 (309)
37 PF02882 THF_DHG_CYH_C: Tetrah 100.0 3.2E-51 6.9E-56 345.3 13.8 160 99-268 1-160 (160)
38 cd01079 NAD_bind_m-THF_DH NAD 100.0 5.4E-45 1.2E-49 314.2 14.9 158 91-269 1-196 (197)
39 cd01080 NAD_bind_m-THF_DH_Cycl 100.0 4.3E-41 9.3E-46 286.3 14.4 168 91-266 1-168 (168)
40 cd05212 NAD_bind_m-THF_DH_Cycl 100.0 1.2E-39 2.6E-44 269.6 14.0 137 111-265 3-139 (140)
41 PRK12550 shikimate 5-dehydroge 100.0 1.3E-27 2.7E-32 217.9 17.4 230 1-271 1-256 (272)
42 PRK12549 shikimate 5-dehydroge 100.0 1.7E-27 3.6E-32 218.4 17.7 225 13-271 8-267 (284)
43 PRK12749 quinate/shikimate deh 99.9 4.2E-27 9.2E-32 216.1 16.1 221 15-271 12-273 (288)
44 PF00763 THF_DHG_CYH: Tetrahyd 99.9 1.5E-27 3.2E-32 191.9 10.5 91 6-96 27-117 (117)
45 COG0169 AroE Shikimate 5-dehyd 99.9 5.8E-27 1.3E-31 214.1 15.6 210 26-271 22-266 (283)
46 PRK12548 shikimate 5-dehydroge 99.9 1.4E-26 3E-31 212.7 17.9 222 14-271 13-276 (289)
47 PRK00258 aroE shikimate 5-dehy 99.9 9.2E-27 2E-31 212.6 15.4 220 15-271 10-261 (278)
48 TIGR01809 Shik-DH-AROM shikima 99.9 2.6E-26 5.6E-31 210.3 17.7 226 10-271 5-271 (282)
49 PRK14027 quinate/shikimate deh 99.9 1.2E-26 2.5E-31 212.7 15.1 224 15-272 9-270 (283)
50 TIGR00507 aroE shikimate 5-deh 99.9 1.6E-25 3.4E-30 203.5 15.0 210 26-271 16-254 (270)
51 PLN02520 bifunctional 3-dehydr 99.9 1.7E-23 3.6E-28 206.6 14.4 221 14-272 256-516 (529)
52 PRK09310 aroDE bifunctional 3- 99.9 9.4E-23 2E-27 199.1 14.9 219 14-271 219-456 (477)
53 PRK08306 dipicolinate synthase 99.6 1E-15 2.2E-20 141.3 10.9 131 118-266 133-286 (296)
54 TIGR02853 spore_dpaA dipicolin 99.6 1.6E-14 3.4E-19 132.9 10.1 130 117-265 131-284 (287)
55 PF01488 Shikimate_DH: Shikima 99.3 1.2E-12 2.5E-17 107.5 4.6 86 126-212 2-113 (135)
56 cd01065 NAD_bind_Shikimate_DH 99.3 1.5E-11 3.1E-16 101.8 11.0 128 119-270 2-155 (155)
57 COG0373 HemA Glutamyl-tRNA red 99.3 3.4E-12 7.3E-17 122.1 6.1 146 50-213 109-279 (414)
58 PF00670 AdoHcyase_NAD: S-aden 99.3 1.2E-11 2.6E-16 104.5 7.3 92 121-213 7-115 (162)
59 cd05191 NAD_bind_amino_acid_DH 99.2 1.2E-10 2.5E-15 88.3 7.7 78 118-208 1-86 (86)
60 PRK13940 glutamyl-tRNA reducta 99.2 4.5E-11 9.7E-16 115.2 6.5 146 50-213 112-278 (414)
61 PTZ00075 Adenosylhomocysteinas 99.1 5.3E-11 1.1E-15 115.8 6.3 114 127-247 245-374 (476)
62 cd05311 NAD_bind_2_malic_enz N 99.0 8E-10 1.7E-14 98.4 6.9 92 119-213 8-132 (226)
63 PRK14982 acyl-ACP reductase; P 98.9 7.1E-09 1.5E-13 97.5 11.2 87 127-213 146-251 (340)
64 PRK00676 hemA glutamyl-tRNA re 98.9 1.5E-09 3.3E-14 101.8 6.4 115 86-213 136-266 (338)
65 cd01078 NAD_bind_H4MPT_DH NADP 98.9 1.6E-08 3.4E-13 87.4 11.7 95 119-213 7-134 (194)
66 PRK05476 S-adenosyl-L-homocyst 98.8 9E-09 2E-13 99.4 7.9 95 118-213 193-304 (425)
67 COG0499 SAM1 S-adenosylhomocys 98.8 1.1E-08 2.5E-13 95.6 7.3 92 121-213 193-301 (420)
68 PLN00203 glutamyl-tRNA reducta 98.8 7.9E-09 1.7E-13 102.3 5.4 117 85-213 224-374 (519)
69 TIGR00936 ahcY adenosylhomocys 98.7 6.4E-08 1.4E-12 93.1 9.0 94 118-212 176-286 (406)
70 PRK00045 hemA glutamyl-tRNA re 98.7 4.8E-08 1E-12 94.5 7.7 93 120-213 166-285 (423)
71 TIGR00518 alaDH alanine dehydr 98.7 1.3E-07 2.7E-12 90.1 9.9 124 134-266 165-320 (370)
72 TIGR01035 hemA glutamyl-tRNA r 98.6 4.5E-08 9.7E-13 94.6 6.7 92 120-212 164-281 (417)
73 PLN02494 adenosylhomocysteinas 98.5 2.4E-07 5.1E-12 90.4 7.9 91 119-210 236-343 (477)
74 cd05213 NAD_bind_Glutamyl_tRNA 98.5 3.5E-07 7.6E-12 85.0 8.2 92 120-212 162-277 (311)
75 PF02826 2-Hacid_dh_C: D-isome 98.5 2.3E-07 5E-12 79.4 6.5 82 129-211 29-130 (178)
76 PLN02928 oxidoreductase family 98.5 1.3E-06 2.8E-11 82.6 11.9 135 132-269 155-335 (347)
77 cd00401 AdoHcyase S-adenosyl-L 98.5 4.2E-07 9E-12 87.7 8.4 93 119-212 184-293 (413)
78 COG5322 Predicted dehydrogenas 98.4 8.9E-07 1.9E-11 80.3 8.6 148 66-213 70-266 (351)
79 TIGR00561 pntA NAD(P) transhyd 98.4 2.8E-06 6.1E-11 83.9 11.3 146 58-211 79-287 (511)
80 KOG1370 S-adenosylhomocysteine 98.4 7.1E-07 1.5E-11 82.2 6.1 84 129-213 207-306 (434)
81 PRK00257 erythronate-4-phospha 98.3 1.5E-05 3.2E-10 76.4 13.4 144 127-271 107-280 (381)
82 COG0686 Ald Alanine dehydrogen 98.2 1.3E-06 2.8E-11 80.7 5.4 118 134-262 166-317 (371)
83 cd01075 NAD_bind_Leu_Phe_Val_D 98.2 4.1E-06 8.9E-11 73.2 7.6 94 117-212 3-119 (200)
84 PF08501 Shikimate_dh_N: Shiki 98.2 9.4E-07 2E-11 66.7 3.0 65 27-96 13-78 (83)
85 PRK15438 erythronate-4-phospha 98.2 3.8E-06 8.3E-11 80.3 7.6 144 127-271 107-280 (378)
86 TIGR02992 ectoine_eutC ectoine 98.2 5.1E-06 1.1E-10 77.8 7.5 91 117-210 112-226 (326)
87 PRK13243 glyoxylate reductase; 98.2 4.7E-06 1E-10 78.3 7.2 136 132-269 146-312 (333)
88 PRK06932 glycerate dehydrogena 98.1 4.3E-06 9.4E-11 78.0 6.3 135 132-269 143-310 (314)
89 PRK08410 2-hydroxyacid dehydro 98.1 6E-06 1.3E-10 76.9 7.0 135 132-269 141-307 (311)
90 PRK06487 glycerate dehydrogena 98.1 5.3E-06 1.1E-10 77.5 6.6 135 132-269 144-308 (317)
91 PRK06436 glycerate dehydrogena 98.1 6.4E-06 1.4E-10 76.5 6.9 80 132-212 118-213 (303)
92 PRK15409 bifunctional glyoxyla 98.1 3.2E-05 6.9E-10 72.5 11.4 136 131-269 140-309 (323)
93 PRK06718 precorrin-2 dehydroge 98.1 6.4E-06 1.4E-10 72.2 6.3 113 132-263 6-142 (202)
94 PRK07574 formate dehydrogenase 98.1 7.3E-06 1.6E-10 78.6 6.9 135 132-269 188-357 (385)
95 PRK15469 ghrA bifunctional gly 98.1 9.8E-06 2.1E-10 75.6 7.0 80 132-212 132-230 (312)
96 PRK08291 ectoine utilization p 98.0 1.7E-05 3.6E-10 74.4 8.4 91 117-210 115-229 (330)
97 COG0111 SerA Phosphoglycerate 98.0 1.1E-05 2.3E-10 75.8 6.8 137 130-269 136-306 (324)
98 PRK12480 D-lactate dehydrogena 98.0 9.6E-06 2.1E-10 76.2 6.5 80 132-212 142-238 (330)
99 PLN02306 hydroxypyruvate reduc 98.0 1.3E-05 2.7E-10 77.0 6.7 80 132-212 161-276 (386)
100 PRK08605 D-lactate dehydrogena 98.0 1.7E-05 3.7E-10 74.5 7.4 80 132-212 142-240 (332)
101 PRK08618 ornithine cyclodeamin 98.0 3.7E-05 7.9E-10 72.0 9.3 76 134-211 125-224 (325)
102 PRK09424 pntA NAD(P) transhydr 97.9 2.3E-05 5.1E-10 77.5 7.8 90 121-211 140-288 (509)
103 PLN03139 formate dehydrogenase 97.9 2E-05 4.4E-10 75.5 6.8 135 132-269 195-364 (386)
104 PF01262 AlaDh_PNT_C: Alanine 97.9 6.5E-06 1.4E-10 69.8 2.8 78 133-211 17-142 (168)
105 PRK11790 D-3-phosphoglycerate 97.9 2.4E-05 5.2E-10 75.6 6.7 80 131-211 146-242 (409)
106 PRK12862 malic enzyme; Reviewe 97.9 7.4E-05 1.6E-09 77.3 10.0 169 26-212 97-295 (763)
107 PRK07232 bifunctional malic en 97.8 0.00013 2.9E-09 75.2 11.3 169 26-212 89-287 (752)
108 PF03446 NAD_binding_2: NAD bi 97.8 2.5E-05 5.4E-10 65.8 5.1 74 137-211 2-97 (163)
109 PRK07340 ornithine cyclodeamin 97.8 0.00012 2.6E-09 68.0 10.0 78 132-211 121-220 (304)
110 TIGR01327 PGDH D-3-phosphoglyc 97.8 3.8E-05 8.2E-10 76.5 7.1 81 131-212 133-233 (525)
111 PRK06719 precorrin-2 dehydroge 97.8 2.9E-05 6.3E-10 65.4 5.3 59 132-191 9-82 (157)
112 PRK06141 ornithine cyclodeamin 97.8 8.4E-05 1.8E-09 69.3 8.8 77 133-210 122-221 (314)
113 PRK13581 D-3-phosphoglycerate 97.8 4.8E-05 1E-09 75.8 7.1 80 132-212 136-234 (526)
114 COG0281 SfcA Malic enzyme [Ene 97.8 0.00019 4.1E-09 68.9 10.5 168 25-211 102-302 (432)
115 PF13241 NAD_binding_7: Putati 97.8 3.3E-05 7.1E-10 60.4 4.3 59 132-191 3-72 (103)
116 COG1052 LdhA Lactate dehydroge 97.7 6E-05 1.3E-09 70.7 6.2 135 132-269 142-312 (324)
117 PRK12861 malic enzyme; Reviewe 97.6 0.00012 2.7E-09 75.4 7.0 166 26-212 93-291 (764)
118 COG2084 MmsB 3-hydroxyisobutyr 97.5 0.00023 4.9E-09 65.7 7.1 73 137-210 1-97 (286)
119 KOG0069 Glyoxylate/hydroxypyru 97.5 0.00017 3.7E-09 67.8 5.9 79 132-211 158-256 (336)
120 PRK14619 NAD(P)H-dependent gly 97.5 0.00026 5.6E-09 65.6 7.0 73 135-208 3-82 (308)
121 TIGR01470 cysG_Nterm siroheme 97.5 0.00022 4.7E-09 62.7 5.9 59 132-191 5-81 (205)
122 PRK11199 tyrA bifunctional cho 97.4 0.0003 6.4E-09 67.2 6.8 75 135-210 97-177 (374)
123 PRK06823 ornithine cyclodeamin 97.4 0.00043 9.3E-09 64.7 7.2 75 135-210 127-224 (315)
124 TIGR02371 ala_DH_arch alanine 97.4 0.00037 8.1E-09 65.3 6.8 75 135-210 127-224 (325)
125 PF01210 NAD_Gly3P_dh_N: NAD-d 97.4 0.00032 6.9E-09 58.8 5.2 69 138-207 1-102 (157)
126 PRK06407 ornithine cyclodeamin 97.3 0.0005 1.1E-08 63.8 6.9 76 135-211 116-215 (301)
127 PRK13403 ketol-acid reductoiso 97.3 0.00031 6.8E-09 65.8 5.3 71 133-204 13-102 (335)
128 PF07991 IlvN: Acetohydroxy ac 97.3 0.00045 9.8E-09 58.6 5.2 76 134-210 2-98 (165)
129 PRK14804 ornithine carbamoyltr 97.3 0.0092 2E-07 55.8 14.5 148 21-186 53-225 (311)
130 PF03807 F420_oxidored: NADP o 97.3 0.00026 5.7E-09 53.7 3.4 70 138-208 1-94 (96)
131 COG1748 LYS9 Saccharopine dehy 97.3 0.0007 1.5E-08 65.0 6.9 111 137-264 2-140 (389)
132 PRK07589 ornithine cyclodeamin 97.2 0.00088 1.9E-08 63.5 7.2 76 135-211 128-228 (346)
133 TIGR01505 tartro_sem_red 2-hyd 97.2 0.00064 1.4E-08 62.2 6.0 72 138-210 1-95 (291)
134 PLN02712 arogenate dehydrogena 97.2 0.00074 1.6E-08 69.2 7.0 80 130-210 363-462 (667)
135 COG0287 TyrA Prephenate dehydr 97.2 0.00092 2E-08 61.5 6.8 73 136-210 3-100 (279)
136 cd05312 NAD_bind_1_malic_enz N 97.2 0.00072 1.6E-08 62.2 6.0 92 119-212 8-143 (279)
137 PRK06046 alanine dehydrogenase 97.2 0.00098 2.1E-08 62.5 6.9 74 135-210 128-225 (326)
138 COG1648 CysG Siroheme synthase 97.1 0.00059 1.3E-08 60.3 4.8 116 132-265 8-147 (210)
139 PRK11559 garR tartronate semia 97.1 0.001 2.3E-08 60.8 6.6 74 137-211 3-99 (296)
140 PRK03515 ornithine carbamoyltr 97.1 0.0097 2.1E-07 56.2 13.0 148 21-186 55-232 (336)
141 cd00762 NAD_bind_malic_enz NAD 97.1 0.00068 1.5E-08 61.5 5.0 92 119-212 8-144 (254)
142 PLN02256 arogenate dehydrogena 97.1 0.002 4.4E-08 59.9 8.2 77 132-209 32-128 (304)
143 COG2085 Predicted dinucleotide 97.1 0.00089 1.9E-08 59.0 5.4 73 137-212 2-96 (211)
144 PRK01438 murD UDP-N-acetylmura 97.1 0.0015 3.2E-08 64.0 7.6 132 127-265 7-147 (480)
145 PRK01713 ornithine carbamoyltr 97.1 0.018 3.8E-07 54.4 14.5 146 21-186 56-232 (334)
146 PRK15461 NADH-dependent gamma- 97.1 0.00091 2E-08 61.7 5.7 74 137-211 2-98 (296)
147 PRK13529 malate dehydrogenase; 97.1 0.0027 5.9E-08 63.4 9.2 93 117-211 276-419 (563)
148 PRK12562 ornithine carbamoyltr 97.1 0.024 5.2E-07 53.5 15.0 149 21-187 55-233 (334)
149 PF02423 OCD_Mu_crystall: Orni 97.0 0.0017 3.7E-08 60.5 7.1 76 135-211 127-227 (313)
150 PRK02102 ornithine carbamoyltr 97.0 0.021 4.5E-07 53.9 14.3 148 21-186 56-231 (331)
151 TIGR00670 asp_carb_tr aspartat 97.0 0.017 3.8E-07 53.7 13.6 147 22-186 50-223 (301)
152 PRK02255 putrescine carbamoylt 97.0 0.018 3.8E-07 54.5 13.7 145 22-185 53-228 (338)
153 PF03949 Malic_M: Malic enzyme 97.0 0.00093 2E-08 60.7 4.9 92 119-212 8-144 (255)
154 PRK07502 cyclohexadienyl dehyd 97.0 0.001 2.2E-08 61.4 5.3 74 136-210 6-102 (307)
155 PRK04284 ornithine carbamoyltr 97.0 0.028 6E-07 53.1 14.7 146 21-186 55-231 (332)
156 PRK07417 arogenate dehydrogena 96.9 0.00093 2E-08 61.0 4.2 72 138-210 2-93 (279)
157 PRK11891 aspartate carbamoyltr 96.9 0.042 9.1E-07 53.5 15.3 150 22-188 137-317 (429)
158 PLN02342 ornithine carbamoyltr 96.9 0.023 5E-07 53.9 13.2 148 21-187 95-267 (348)
159 PRK00856 pyrB aspartate carbam 96.9 0.042 9.2E-07 51.2 14.7 149 22-187 56-221 (305)
160 PLN02527 aspartate carbamoyltr 96.8 0.033 7.1E-07 52.0 13.8 148 22-187 50-226 (306)
161 PF00056 Ldh_1_N: lactate/mala 96.8 0.0028 6E-08 52.3 5.9 53 138-190 2-80 (141)
162 PRK14805 ornithine carbamoyltr 96.8 0.04 8.7E-07 51.3 14.1 146 21-187 48-222 (302)
163 PRK06545 prephenate dehydrogen 96.8 0.0024 5.3E-08 60.5 6.2 73 137-210 1-97 (359)
164 PRK05579 bifunctional phosphop 96.8 0.0089 1.9E-07 57.7 9.9 95 118-212 168-306 (399)
165 PRK13814 pyrB aspartate carbam 96.8 0.054 1.2E-06 50.7 14.8 147 22-185 56-223 (310)
166 PRK05479 ketol-acid reductoiso 96.8 0.0029 6.2E-08 59.6 6.3 70 134-204 15-104 (330)
167 TIGR00658 orni_carb_tr ornithi 96.8 0.038 8.2E-07 51.5 13.5 156 10-186 40-223 (304)
168 PRK08818 prephenate dehydrogen 96.7 0.003 6.4E-08 60.4 6.2 75 135-210 3-90 (370)
169 TIGR01692 HIBADH 3-hydroxyisob 96.7 0.0028 6.1E-08 58.1 5.8 69 141-210 1-92 (288)
170 PRK00141 murD UDP-N-acetylmura 96.7 0.0036 7.7E-08 61.5 6.8 128 133-265 12-146 (473)
171 PF01118 Semialdhyde_dh: Semia 96.7 0.002 4.3E-08 51.5 4.1 74 138-211 1-100 (121)
172 PRK15059 tartronate semialdehy 96.7 0.0042 9.1E-08 57.3 6.7 72 138-210 2-95 (292)
173 PRK00779 ornithine carbamoyltr 96.7 0.072 1.6E-06 49.6 14.9 147 21-186 53-224 (304)
174 COG2423 Predicted ornithine cy 96.7 0.0053 1.1E-07 57.9 7.3 76 135-211 129-228 (330)
175 TIGR03316 ygeW probable carbam 96.7 0.039 8.4E-07 52.6 13.2 150 27-186 58-252 (357)
176 PRK07679 pyrroline-5-carboxyla 96.7 0.0044 9.5E-08 56.5 6.5 72 135-207 2-98 (279)
177 PRK12490 6-phosphogluconate de 96.7 0.0047 1E-07 57.0 6.8 72 138-210 2-96 (299)
178 PLN03129 NADP-dependent malic 96.7 0.006 1.3E-07 61.2 7.9 94 117-212 302-439 (581)
179 PRK11064 wecC UDP-N-acetyl-D-m 96.7 0.0036 7.7E-08 60.6 6.2 73 137-210 4-121 (415)
180 cd05291 HicDH_like L-2-hydroxy 96.7 0.0044 9.5E-08 57.5 6.5 53 137-190 1-79 (306)
181 PRK14106 murD UDP-N-acetylmura 96.6 0.0044 9.5E-08 59.9 6.8 37 133-170 2-38 (450)
182 PTZ00317 NADP-dependent malic 96.6 0.0088 1.9E-07 59.7 8.9 95 116-212 277-419 (559)
183 PRK09260 3-hydroxybutyryl-CoA 96.6 0.004 8.7E-08 57.0 6.1 72 137-209 2-119 (288)
184 PF13460 NAD_binding_10: NADH( 96.6 0.0038 8.3E-08 52.3 5.2 51 139-189 1-70 (183)
185 PRK08655 prephenate dehydrogen 96.6 0.0052 1.1E-07 60.0 6.8 71 138-209 2-93 (437)
186 PRK08192 aspartate carbamoyltr 96.6 0.051 1.1E-06 51.4 13.2 144 27-187 60-234 (338)
187 PRK12491 pyrroline-5-carboxyla 96.6 0.0043 9.3E-08 56.7 5.8 72 137-210 3-99 (272)
188 PRK14618 NAD(P)H-dependent gly 96.5 0.0042 9.1E-08 57.8 5.6 72 137-209 5-105 (328)
189 TIGR00872 gnd_rel 6-phosphoglu 96.5 0.0045 9.8E-08 57.1 5.6 72 138-210 2-95 (298)
190 TIGR00465 ilvC ketol-acid redu 96.5 0.0062 1.3E-07 57.0 6.5 55 134-189 1-69 (314)
191 cd01076 NAD_bind_1_Glu_DH NAD( 96.5 0.0076 1.6E-07 53.8 6.6 53 115-168 6-63 (227)
192 cd05313 NAD_bind_2_Glu_DH NAD( 96.5 0.0077 1.7E-07 54.8 6.7 54 115-169 13-71 (254)
193 PRK06199 ornithine cyclodeamin 96.5 0.006 1.3E-07 58.5 6.3 75 135-210 154-261 (379)
194 PRK09599 6-phosphogluconate de 96.4 0.0085 1.8E-07 55.3 6.9 72 138-210 2-96 (301)
195 PF02737 3HCDH_N: 3-hydroxyacy 96.4 0.0063 1.4E-07 52.2 5.6 31 138-169 1-31 (180)
196 PRK00094 gpsA NAD(P)H-dependen 96.4 0.007 1.5E-07 55.7 6.2 74 137-211 2-110 (325)
197 PRK00421 murC UDP-N-acetylmura 96.4 0.006 1.3E-07 59.5 6.0 123 134-265 5-132 (461)
198 PRK05562 precorrin-2 dehydroge 96.4 0.0057 1.2E-07 54.5 5.4 59 132-191 21-97 (223)
199 PLN02688 pyrroline-5-carboxyla 96.4 0.0078 1.7E-07 54.1 6.2 68 138-207 2-94 (266)
200 PRK07200 aspartate/ornithine c 96.3 0.12 2.7E-06 49.9 14.4 158 21-187 69-270 (395)
201 PRK06398 aldose dehydrogenase; 96.3 0.0096 2.1E-07 53.1 6.4 37 133-169 3-39 (258)
202 PRK10637 cysG siroheme synthas 96.3 0.0076 1.7E-07 59.1 6.1 113 132-262 8-144 (457)
203 PRK08507 prephenate dehydrogen 96.3 0.011 2.3E-07 53.8 6.7 70 138-210 2-93 (275)
204 PRK06949 short chain dehydroge 96.3 0.0063 1.4E-07 53.6 5.0 39 132-170 5-43 (258)
205 COG0078 ArgF Ornithine carbamo 96.3 0.018 4E-07 53.3 8.1 141 28-187 61-229 (310)
206 PRK02472 murD UDP-N-acetylmura 96.3 0.01 2.2E-07 57.3 6.9 126 133-265 2-133 (447)
207 PRK08293 3-hydroxybutyryl-CoA 96.3 0.01 2.2E-07 54.4 6.4 72 137-209 4-121 (287)
208 COG3288 PntA NAD/NADP transhyd 96.3 0.0039 8.4E-08 58.0 3.5 90 121-211 139-284 (356)
209 PF10727 Rossmann-like: Rossma 96.2 0.007 1.5E-07 49.4 4.7 72 136-208 10-104 (127)
210 PLN02586 probable cinnamyl alc 96.2 0.017 3.7E-07 54.3 8.0 93 117-210 165-280 (360)
211 PRK06523 short chain dehydroge 96.2 0.012 2.6E-07 52.1 6.4 38 132-169 5-42 (260)
212 TIGR01915 npdG NADPH-dependent 96.2 0.0091 2E-07 52.5 5.5 69 138-208 2-101 (219)
213 cd01492 Aos1_SUMO Ubiquitin ac 96.2 0.025 5.4E-07 49.3 8.1 36 133-169 18-54 (197)
214 PLN02477 glutamate dehydrogena 96.2 0.012 2.6E-07 57.0 6.7 53 116-169 182-239 (410)
215 COG1004 Ugd Predicted UDP-gluc 96.2 0.051 1.1E-06 52.3 10.7 123 79-206 231-406 (414)
216 TIGR02356 adenyl_thiF thiazole 96.1 0.0079 1.7E-07 52.5 4.8 36 133-169 18-54 (202)
217 PTZ00117 malate dehydrogenase; 96.1 0.017 3.8E-07 53.9 7.3 55 134-190 3-84 (319)
218 PRK01710 murD UDP-N-acetylmura 96.1 0.016 3.4E-07 56.7 7.2 35 134-169 12-46 (458)
219 cd05211 NAD_bind_Glu_Leu_Phe_V 96.1 0.016 3.5E-07 51.4 6.6 48 122-170 9-57 (217)
220 COG0569 TrkA K+ transport syst 96.1 0.0096 2.1E-07 53.0 5.1 52 137-189 1-76 (225)
221 PRK12367 short chain dehydroge 96.1 0.013 2.8E-07 52.4 6.0 38 133-170 11-48 (245)
222 PRK09072 short chain dehydroge 96.1 0.0095 2.1E-07 52.9 5.0 38 133-170 2-39 (263)
223 PRK06550 fabG 3-ketoacyl-(acyl 96.1 0.015 3.3E-07 50.5 6.2 57 133-189 2-77 (235)
224 TIGR02354 thiF_fam2 thiamine b 96.0 0.011 2.4E-07 51.7 5.2 36 133-169 18-54 (200)
225 PRK00066 ldh L-lactate dehydro 96.0 0.018 3.9E-07 53.8 6.9 55 135-190 5-84 (315)
226 PLN02712 arogenate dehydrogena 96.0 0.012 2.6E-07 60.4 6.1 76 134-210 50-145 (667)
227 PRK08223 hypothetical protein; 96.0 0.013 2.9E-07 54.1 5.8 35 133-168 24-59 (287)
228 PRK07523 gluconate 5-dehydroge 96.0 0.0066 1.4E-07 53.6 3.7 38 133-170 7-44 (255)
229 PRK12828 short chain dehydroge 96.0 0.0094 2E-07 51.5 4.6 38 133-170 4-41 (239)
230 PRK14031 glutamate dehydrogena 96.0 0.016 3.4E-07 56.7 6.5 51 115-166 203-257 (444)
231 TIGR02355 moeB molybdopterin s 96.0 0.0097 2.1E-07 53.5 4.8 36 133-169 21-57 (240)
232 cd00757 ThiF_MoeB_HesA_family 96.0 0.0061 1.3E-07 54.1 3.4 34 133-167 18-52 (228)
233 PRK03369 murD UDP-N-acetylmura 96.0 0.012 2.7E-07 58.0 5.9 35 134-169 10-44 (488)
234 PRK08862 short chain dehydroge 96.0 0.0079 1.7E-07 53.0 4.0 39 133-171 2-40 (227)
235 PF03721 UDPG_MGDP_dh_N: UDP-g 96.0 0.0092 2E-07 51.5 4.4 53 137-190 1-87 (185)
236 COG0771 MurD UDP-N-acetylmuram 96.0 0.019 4.2E-07 56.2 7.0 127 134-266 5-136 (448)
237 PRK05866 short chain dehydroge 95.9 0.015 3.3E-07 53.1 5.5 40 131-170 35-74 (293)
238 PLN02858 fructose-bisphosphate 95.8 0.013 2.9E-07 64.6 5.9 75 135-210 3-100 (1378)
239 PRK06124 gluconate 5-dehydroge 95.8 0.0092 2E-07 52.6 3.9 39 132-170 7-45 (256)
240 PLN02353 probable UDP-glucose 95.8 0.075 1.6E-06 52.5 10.5 77 132-208 320-447 (473)
241 PLN02545 3-hydroxybutyryl-CoA 95.8 0.014 2.9E-07 53.6 5.0 72 137-209 5-121 (295)
242 PRK07231 fabG 3-ketoacyl-(acyl 95.8 0.01 2.2E-07 51.8 4.1 38 133-170 2-39 (251)
243 PRK06130 3-hydroxybutyryl-CoA 95.8 0.02 4.3E-07 52.8 6.2 53 137-190 5-90 (311)
244 PRK12475 thiamine/molybdopteri 95.8 0.014 3.1E-07 55.0 5.3 36 133-169 21-57 (338)
245 cd00650 LDH_MDH_like NAD-depen 95.8 0.023 4.9E-07 51.4 6.3 53 139-191 1-82 (263)
246 PRK07680 late competence prote 95.8 0.017 3.8E-07 52.3 5.6 71 138-209 2-97 (273)
247 PRK07424 bifunctional sterol d 95.8 0.021 4.6E-07 55.3 6.4 40 131-170 173-212 (406)
248 KOG0068 D-3-phosphoglycerate d 95.8 0.021 4.6E-07 53.8 6.1 171 22-210 12-238 (406)
249 PTZ00082 L-lactate dehydrogena 95.8 0.03 6.5E-07 52.5 7.3 56 134-191 4-86 (321)
250 PRK09880 L-idonate 5-dehydroge 95.8 0.035 7.7E-07 51.6 7.7 86 124-211 159-269 (343)
251 PRK08339 short chain dehydroge 95.7 0.013 2.8E-07 52.5 4.5 38 132-169 4-41 (263)
252 TIGR01832 kduD 2-deoxy-D-gluco 95.7 0.017 3.7E-07 50.6 5.2 37 133-169 2-38 (248)
253 PRK06171 sorbitol-6-phosphate 95.7 0.026 5.6E-07 50.1 6.4 37 133-169 6-42 (266)
254 PRK06172 short chain dehydroge 95.7 0.011 2.3E-07 52.1 3.9 38 133-170 4-41 (253)
255 PLN02350 phosphogluconate dehy 95.7 0.02 4.4E-07 56.7 6.1 73 138-211 8-110 (493)
256 PRK08085 gluconate 5-dehydroge 95.7 0.011 2.5E-07 52.1 3.9 38 133-170 6-43 (254)
257 PF00899 ThiF: ThiF family; I 95.7 0.015 3.2E-07 47.2 4.2 34 135-169 1-35 (135)
258 PLN02968 Probable N-acetyl-gam 95.7 0.015 3.3E-07 55.8 4.9 76 135-212 37-138 (381)
259 PRK07062 short chain dehydroge 95.7 0.013 2.8E-07 52.0 4.2 39 132-170 4-42 (265)
260 PTZ00142 6-phosphogluconate de 95.7 0.024 5.3E-07 55.9 6.5 73 137-210 2-103 (470)
261 PRK07066 3-hydroxybutyryl-CoA 95.7 0.029 6.2E-07 52.7 6.7 51 137-188 8-92 (321)
262 PRK05690 molybdopterin biosynt 95.7 0.017 3.8E-07 52.0 5.0 35 133-168 29-64 (245)
263 PRK06035 3-hydroxyacyl-CoA deh 95.7 0.017 3.7E-07 52.9 5.0 32 137-169 4-35 (291)
264 PRK07819 3-hydroxybutyryl-CoA 95.6 0.028 6.2E-07 51.7 6.4 32 137-169 6-37 (286)
265 PRK06138 short chain dehydroge 95.6 0.014 2.9E-07 51.2 4.2 38 133-170 2-39 (252)
266 PRK08628 short chain dehydroge 95.6 0.019 4E-07 50.7 5.1 40 131-170 2-41 (258)
267 PRK07063 short chain dehydroge 95.6 0.013 2.8E-07 51.9 4.0 37 133-169 4-40 (260)
268 CHL00194 ycf39 Ycf39; Provisio 95.6 0.023 4.9E-07 52.4 5.8 51 138-188 2-73 (317)
269 PRK05717 oxidoreductase; Valid 95.6 0.014 3.1E-07 51.5 4.2 39 131-169 5-43 (255)
270 TIGR03325 BphB_TodD cis-2,3-di 95.6 0.017 3.7E-07 51.3 4.8 38 133-170 2-39 (262)
271 TIGR03366 HpnZ_proposed putati 95.6 0.028 6E-07 50.8 6.2 92 117-210 103-220 (280)
272 PRK04523 N-acetylornithine car 95.6 0.22 4.8E-06 47.1 12.4 152 21-187 48-252 (335)
273 PRK06129 3-hydroxyacyl-CoA deh 95.6 0.025 5.5E-07 52.3 6.0 53 137-190 3-93 (308)
274 PRK06728 aspartate-semialdehyd 95.6 0.06 1.3E-06 51.1 8.6 113 135-257 4-138 (347)
275 PRK14874 aspartate-semialdehyd 95.6 0.015 3.2E-07 54.8 4.4 76 136-211 1-97 (334)
276 PRK05867 short chain dehydroge 95.6 0.017 3.7E-07 51.0 4.6 38 133-170 6-43 (253)
277 PRK12829 short chain dehydroge 95.6 0.022 4.7E-07 50.2 5.3 38 133-170 8-45 (264)
278 PRK08265 short chain dehydroge 95.6 0.016 3.6E-07 51.6 4.5 38 133-170 3-40 (261)
279 PRK06057 short chain dehydroge 95.6 0.014 3.1E-07 51.6 4.0 37 134-170 5-41 (255)
280 COG2910 Putative NADH-flavin r 95.6 0.032 7E-07 48.5 6.0 54 137-190 1-73 (211)
281 TIGR03026 NDP-sugDHase nucleot 95.6 0.028 6E-07 54.2 6.3 71 138-209 2-121 (411)
282 PRK06935 2-deoxy-D-gluconate 3 95.5 0.024 5.3E-07 50.1 5.5 38 132-169 11-48 (258)
283 PRK07890 short chain dehydroge 95.5 0.018 3.8E-07 50.7 4.5 37 134-170 3-39 (258)
284 PRK01368 murD UDP-N-acetylmura 95.5 0.034 7.4E-07 54.4 6.9 123 135-265 5-129 (454)
285 KOG1198 Zinc-binding oxidoredu 95.5 0.074 1.6E-06 50.4 8.9 78 115-192 131-238 (347)
286 PRK07530 3-hydroxybutyryl-CoA 95.5 0.021 4.6E-07 52.3 5.0 32 137-169 5-36 (292)
287 PRK05225 ketol-acid reductoiso 95.5 0.013 2.8E-07 57.4 3.7 56 133-189 33-107 (487)
288 PTZ00079 NADP-specific glutama 95.5 0.035 7.7E-07 54.4 6.7 53 116-169 213-270 (454)
289 PLN02514 cinnamyl-alcohol dehy 95.5 0.04 8.6E-07 51.7 6.9 93 117-210 162-277 (357)
290 TIGR02825 B4_12hDH leukotriene 95.5 0.034 7.4E-07 51.0 6.3 90 121-210 124-239 (325)
291 PRK08644 thiamine biosynthesis 95.4 0.025 5.5E-07 49.9 5.1 36 133-169 25-61 (212)
292 PRK04690 murD UDP-N-acetylmura 95.4 0.035 7.6E-07 54.5 6.7 126 134-265 6-140 (468)
293 PRK08213 gluconate 5-dehydroge 95.4 0.019 4.1E-07 50.8 4.4 39 132-170 8-46 (259)
294 PF05368 NmrA: NmrA-like famil 95.4 0.028 6.1E-07 49.2 5.4 52 139-190 1-75 (233)
295 TIGR03589 PseB UDP-N-acetylglu 95.4 0.027 5.8E-07 52.2 5.5 36 134-169 2-39 (324)
296 PRK07097 gluconate 5-dehydroge 95.4 0.017 3.8E-07 51.4 4.1 39 132-170 6-44 (265)
297 PRK08703 short chain dehydroge 95.4 0.026 5.7E-07 49.2 5.2 38 133-170 3-40 (239)
298 TIGR00521 coaBC_dfp phosphopan 95.4 0.054 1.2E-06 52.2 7.7 95 117-211 163-303 (390)
299 PLN02858 fructose-bisphosphate 95.4 0.027 5.9E-07 62.2 6.2 74 136-210 324-420 (1378)
300 PRK06841 short chain dehydroge 95.4 0.028 6.1E-07 49.4 5.3 38 132-169 11-48 (255)
301 PRK07060 short chain dehydroge 95.4 0.023 4.9E-07 49.5 4.6 39 132-170 5-43 (245)
302 PRK08762 molybdopterin biosynt 95.4 0.022 4.8E-07 54.3 4.9 36 133-169 132-168 (376)
303 PRK06476 pyrroline-5-carboxyla 95.4 0.026 5.6E-07 50.7 5.1 71 138-209 2-94 (258)
304 PRK06182 short chain dehydroge 95.4 0.03 6.5E-07 50.0 5.5 35 135-169 2-36 (273)
305 PRK09186 flagellin modificatio 95.4 0.02 4.3E-07 50.3 4.2 37 134-170 2-38 (256)
306 PRK09242 tropinone reductase; 95.4 0.017 3.6E-07 51.1 3.7 39 132-170 5-43 (257)
307 COG0240 GpsA Glycerol-3-phosph 95.3 0.043 9.4E-07 51.6 6.5 70 137-207 2-104 (329)
308 PLN02178 cinnamyl-alcohol dehy 95.3 0.065 1.4E-06 50.9 7.8 93 117-210 159-275 (375)
309 PRK08229 2-dehydropantoate 2-r 95.3 0.036 7.8E-07 51.6 6.0 70 137-207 3-106 (341)
310 TIGR01202 bchC 2-desacetyl-2-h 95.3 0.049 1.1E-06 50.0 6.8 76 134-210 143-233 (308)
311 PRK06463 fabG 3-ketoacyl-(acyl 95.3 0.031 6.8E-07 49.3 5.3 37 133-169 4-40 (255)
312 PRK08220 2,3-dihydroxybenzoate 95.3 0.043 9.3E-07 48.0 6.1 38 132-169 4-41 (252)
313 KOG1494 NAD-dependent malate d 95.3 0.019 4.2E-07 52.8 3.9 58 133-191 25-108 (345)
314 PRK05854 short chain dehydroge 95.3 0.018 3.8E-07 53.2 3.8 38 132-169 10-47 (313)
315 TIGR00873 gnd 6-phosphoglucona 95.3 0.022 4.7E-07 56.2 4.5 72 138-210 1-100 (467)
316 PRK05872 short chain dehydroge 95.3 0.019 4.1E-07 52.4 3.9 39 132-170 5-43 (296)
317 PRK12826 3-ketoacyl-(acyl-carr 95.3 0.022 4.8E-07 49.6 4.1 37 133-169 3-39 (251)
318 PRK06125 short chain dehydroge 95.2 0.027 5.8E-07 49.9 4.7 38 133-170 4-41 (259)
319 PLN02989 cinnamyl-alcohol dehy 95.2 0.048 1E-06 50.0 6.5 35 135-169 4-38 (325)
320 PRK07531 bifunctional 3-hydrox 95.2 0.042 9.2E-07 54.4 6.5 53 137-190 5-91 (495)
321 PLN02986 cinnamyl-alcohol dehy 95.2 0.058 1.3E-06 49.5 7.0 36 134-169 3-38 (322)
322 PRK07478 short chain dehydroge 95.2 0.021 4.6E-07 50.3 3.9 38 133-170 3-40 (254)
323 PRK06194 hypothetical protein; 95.2 0.023 4.9E-07 51.1 4.2 37 133-169 3-39 (287)
324 cd08294 leukotriene_B4_DH_like 95.2 0.061 1.3E-06 49.0 7.1 93 117-209 125-242 (329)
325 PRK07035 short chain dehydroge 95.2 0.02 4.4E-07 50.3 3.7 38 133-170 5-42 (252)
326 PRK06196 oxidoreductase; Provi 95.2 0.022 4.8E-07 52.4 4.1 39 131-169 21-59 (315)
327 PLN02819 lysine-ketoglutarate 95.2 0.016 3.4E-07 62.1 3.5 114 135-265 568-721 (1042)
328 PRK13394 3-hydroxybutyrate deh 95.2 0.024 5.2E-07 49.9 4.2 38 133-170 4-41 (262)
329 PRK05600 thiamine biosynthesis 95.2 0.031 6.6E-07 53.5 5.2 36 133-169 38-74 (370)
330 PRK08264 short chain dehydroge 95.2 0.031 6.8E-07 48.6 4.9 38 133-170 3-41 (238)
331 PRK07825 short chain dehydroge 95.2 0.027 5.8E-07 50.3 4.5 38 133-170 2-39 (273)
332 PRK07634 pyrroline-5-carboxyla 95.2 0.05 1.1E-06 48.2 6.2 54 135-189 3-76 (245)
333 cd05292 LDH_2 A subgroup of L- 95.1 0.052 1.1E-06 50.4 6.5 52 138-190 2-78 (308)
334 cd08230 glucose_DH Glucose deh 95.1 0.046 1E-06 51.0 6.2 77 134-211 171-272 (355)
335 PRK05597 molybdopterin biosynt 95.1 0.034 7.4E-07 52.8 5.3 36 133-169 25-61 (355)
336 PRK01390 murD UDP-N-acetylmura 95.1 0.044 9.6E-07 53.3 6.3 35 134-169 7-41 (460)
337 PRK07774 short chain dehydroge 95.1 0.031 6.8E-07 48.9 4.7 38 133-170 3-40 (250)
338 PRK06500 short chain dehydroge 95.1 0.023 5E-07 49.6 3.8 36 134-169 4-39 (249)
339 COG0059 IlvC Ketol-acid reduct 95.1 0.043 9.4E-07 51.0 5.7 54 134-188 16-83 (338)
340 PRK06223 malate dehydrogenase; 95.1 0.062 1.3E-06 49.5 6.9 53 137-191 3-82 (307)
341 PRK08589 short chain dehydroge 95.1 0.025 5.5E-07 50.7 4.2 37 133-169 3-39 (272)
342 PRK07814 short chain dehydroge 95.1 0.03 6.5E-07 49.9 4.6 38 133-170 7-44 (263)
343 PRK06200 2,3-dihydroxy-2,3-dih 95.1 0.023 5E-07 50.4 3.9 37 134-170 4-40 (263)
344 PRK07856 short chain dehydroge 95.1 0.04 8.7E-07 48.6 5.4 37 133-169 3-39 (252)
345 PRK06179 short chain dehydroge 95.1 0.049 1.1E-06 48.4 6.0 35 135-169 3-37 (270)
346 PLN02662 cinnamyl-alcohol dehy 95.1 0.061 1.3E-06 49.0 6.7 35 135-169 3-37 (322)
347 PRK05876 short chain dehydroge 95.1 0.022 4.8E-07 51.5 3.7 37 133-169 3-39 (275)
348 PRK08993 2-deoxy-D-gluconate 3 95.1 0.054 1.2E-06 47.9 6.2 36 133-168 7-42 (253)
349 cd08293 PTGR2 Prostaglandin re 95.1 0.06 1.3E-06 49.6 6.6 74 136-209 155-255 (345)
350 TIGR01763 MalateDH_bact malate 95.1 0.066 1.4E-06 49.8 6.9 53 137-191 2-81 (305)
351 PRK12429 3-hydroxybutyrate deh 95.1 0.034 7.5E-07 48.7 4.8 37 134-170 2-38 (258)
352 TIGR01214 rmlD dTDP-4-dehydror 95.1 0.035 7.7E-07 49.7 5.0 52 138-189 1-60 (287)
353 PRK09414 glutamate dehydrogena 95.1 0.052 1.1E-06 53.2 6.4 51 115-166 207-261 (445)
354 PRK08277 D-mannonate oxidoredu 95.0 0.024 5.2E-07 50.8 3.8 39 132-170 6-44 (278)
355 PRK02006 murD UDP-N-acetylmura 95.0 0.058 1.3E-06 53.2 6.9 36 134-170 5-40 (498)
356 PRK08416 7-alpha-hydroxysteroi 95.0 0.033 7.1E-07 49.5 4.7 37 132-168 4-40 (260)
357 PRK07576 short chain dehydroge 95.0 0.032 6.8E-07 49.9 4.5 37 133-169 6-42 (264)
358 PRK04308 murD UDP-N-acetylmura 95.0 0.06 1.3E-06 52.2 6.8 124 134-265 3-135 (445)
359 TIGR02279 PaaC-3OHAcCoADH 3-hy 95.0 0.033 7.2E-07 55.4 5.0 32 137-169 6-37 (503)
360 PRK12481 2-deoxy-D-gluconate 3 95.0 0.038 8.3E-07 48.9 5.0 37 133-169 5-41 (251)
361 PRK05786 fabG 3-ketoacyl-(acyl 95.0 0.034 7.3E-07 48.3 4.5 38 133-170 2-39 (238)
362 PRK07067 sorbitol dehydrogenas 95.0 0.027 5.8E-07 49.8 3.9 37 134-170 4-40 (257)
363 COG0604 Qor NADPH:quinone redu 95.0 0.058 1.3E-06 50.6 6.3 95 116-210 123-243 (326)
364 PRK14806 bifunctional cyclohex 95.0 0.04 8.6E-07 56.9 5.6 73 137-210 4-99 (735)
365 PF04127 DFP: DNA / pantothena 94.9 0.046 9.9E-07 47.4 5.1 79 134-212 1-122 (185)
366 PLN02427 UDP-apiose/xylose syn 94.9 0.056 1.2E-06 51.2 6.1 58 131-188 9-95 (386)
367 PLN02896 cinnamyl-alcohol dehy 94.9 0.048 1E-06 50.9 5.6 59 131-189 5-89 (353)
368 TIGR01850 argC N-acetyl-gamma- 94.9 0.047 1E-06 51.7 5.5 76 137-212 1-103 (346)
369 PRK08936 glucose-1-dehydrogena 94.9 0.046 1E-06 48.4 5.2 37 133-169 4-40 (261)
370 PRK05808 3-hydroxybutyryl-CoA 94.9 0.034 7.3E-07 50.7 4.4 32 137-169 4-35 (282)
371 PRK06114 short chain dehydroge 94.9 0.049 1.1E-06 48.2 5.3 38 133-170 5-42 (254)
372 PF03435 Saccharop_dh: Sacchar 94.9 0.033 7.2E-07 52.9 4.5 70 139-209 1-99 (386)
373 cd05188 MDR Medium chain reduc 94.9 0.14 3E-06 44.6 8.2 94 117-211 116-235 (271)
374 PLN02657 3,8-divinyl protochlo 94.8 0.054 1.2E-06 51.9 5.9 40 131-170 55-94 (390)
375 PRK05653 fabG 3-ketoacyl-(acyl 94.8 0.048 1E-06 47.1 5.1 38 133-170 2-39 (246)
376 PRK07326 short chain dehydroge 94.8 0.03 6.6E-07 48.5 3.8 37 134-170 4-40 (237)
377 PRK07666 fabG 3-ketoacyl-(acyl 94.8 0.04 8.7E-07 48.0 4.6 38 133-170 4-41 (239)
378 PRK06077 fabG 3-ketoacyl-(acyl 94.8 0.078 1.7E-06 46.3 6.5 36 133-168 3-38 (252)
379 cd01487 E1_ThiF_like E1_ThiF_l 94.8 0.064 1.4E-06 45.8 5.7 31 138-169 1-32 (174)
380 PRK09291 short chain dehydroge 94.8 0.048 1E-06 47.9 5.1 34 136-169 2-35 (257)
381 PRK08268 3-hydroxy-acyl-CoA de 94.8 0.041 8.9E-07 54.7 5.1 32 137-169 8-39 (507)
382 PRK06139 short chain dehydroge 94.8 0.025 5.4E-07 52.9 3.4 38 133-170 4-41 (330)
383 cd00704 MDH Malate dehydrogena 94.8 0.079 1.7E-06 49.8 6.7 54 138-191 2-88 (323)
384 PRK14030 glutamate dehydrogena 94.8 0.082 1.8E-06 51.8 6.9 50 116-166 204-257 (445)
385 cd08292 ETR_like_2 2-enoyl thi 94.8 0.13 2.8E-06 46.6 7.9 93 117-210 122-240 (324)
386 PRK05875 short chain dehydroge 94.7 0.031 6.7E-07 49.9 3.7 37 133-169 4-40 (276)
387 PRK08217 fabG 3-ketoacyl-(acyl 94.7 0.033 7.1E-07 48.6 3.8 37 134-170 3-39 (253)
388 PRK12939 short chain dehydroge 94.7 0.04 8.7E-07 48.0 4.3 37 133-169 4-40 (250)
389 KOG0725 Reductases with broad 94.7 0.041 9E-07 50.3 4.5 40 132-171 4-43 (270)
390 TIGR01724 hmd_rel H2-forming N 94.7 0.058 1.2E-06 50.7 5.4 63 149-211 32-119 (341)
391 PRK12823 benD 1,6-dihydroxycyc 94.7 0.055 1.2E-06 47.8 5.2 37 133-169 5-41 (260)
392 KOG0409 Predicted dehydrogenas 94.7 0.086 1.9E-06 49.1 6.4 58 133-191 32-103 (327)
393 PLN02695 GDP-D-mannose-3',5'-e 94.7 0.06 1.3E-06 51.0 5.7 54 135-188 20-94 (370)
394 PRK12743 oxidoreductase; Provi 94.7 0.081 1.8E-06 46.8 6.2 33 136-168 2-34 (256)
395 PRK05565 fabG 3-ketoacyl-(acyl 94.7 0.042 9.1E-07 47.7 4.3 38 133-170 2-40 (247)
396 smart00859 Semialdhyde_dh Semi 94.7 0.053 1.1E-06 43.0 4.5 74 138-211 1-102 (122)
397 PRK06928 pyrroline-5-carboxyla 94.7 0.074 1.6E-06 48.6 6.0 52 137-189 2-74 (277)
398 PF13738 Pyr_redox_3: Pyridine 94.6 0.048 1E-06 46.3 4.5 37 133-170 164-200 (203)
399 PLN02214 cinnamoyl-CoA reducta 94.6 0.083 1.8E-06 49.3 6.5 36 134-169 8-43 (342)
400 PRK07533 enoyl-(acyl carrier p 94.6 0.06 1.3E-06 48.0 5.2 37 132-169 6-45 (258)
401 PRK05557 fabG 3-ketoacyl-(acyl 94.6 0.063 1.4E-06 46.4 5.3 38 133-170 2-39 (248)
402 KOG1502 Flavonol reductase/cin 94.6 0.09 1.9E-06 49.5 6.5 36 135-170 5-40 (327)
403 PLN02383 aspartate semialdehyd 94.6 0.058 1.3E-06 51.1 5.3 77 135-211 6-103 (344)
404 cd08239 THR_DH_like L-threonin 94.6 0.081 1.8E-06 48.7 6.2 92 117-210 146-264 (339)
405 TIGR01851 argC_other N-acetyl- 94.6 0.064 1.4E-06 50.2 5.4 76 137-212 2-84 (310)
406 KOG0023 Alcohol dehydrogenase, 94.6 0.057 1.2E-06 50.7 5.0 64 122-187 169-234 (360)
407 PRK06197 short chain dehydroge 94.5 0.033 7E-07 50.9 3.4 37 133-169 13-49 (306)
408 PLN03209 translocon at the inn 94.5 0.062 1.3E-06 54.2 5.6 37 134-170 78-114 (576)
409 PLN02253 xanthoxin dehydrogena 94.5 0.042 9.1E-07 49.2 4.0 37 133-169 15-51 (280)
410 PRK06505 enoyl-(acyl carrier p 94.5 0.056 1.2E-06 48.7 4.9 35 134-169 5-42 (271)
411 PRK12742 oxidoreductase; Provi 94.5 0.069 1.5E-06 46.3 5.3 36 133-168 3-38 (237)
412 TIGR03376 glycerol3P_DH glycer 94.5 0.075 1.6E-06 50.3 5.8 69 138-207 1-115 (342)
413 KOG1201 Hydroxysteroid 17-beta 94.5 0.074 1.6E-06 49.3 5.6 59 131-189 33-124 (300)
414 PRK08040 putative semialdehyde 94.5 0.048 1E-06 51.5 4.5 78 135-212 3-101 (336)
415 COG1064 AdhP Zn-dependent alco 94.5 0.055 1.2E-06 51.2 4.8 85 124-211 156-262 (339)
416 COG1086 Predicted nucleoside-d 94.5 0.35 7.6E-06 48.6 10.5 115 29-169 169-284 (588)
417 PRK07878 molybdopterin biosynt 94.5 0.057 1.2E-06 51.9 5.0 34 134-168 40-74 (392)
418 TIGR03206 benzo_BadH 2-hydroxy 94.4 0.065 1.4E-06 46.8 5.0 36 134-169 1-36 (250)
419 TIGR03466 HpnA hopanoid-associ 94.4 0.077 1.7E-06 48.2 5.6 52 137-188 1-73 (328)
420 PRK06198 short chain dehydroge 94.4 0.053 1.1E-06 47.8 4.3 38 133-170 3-41 (260)
421 PRK06914 short chain dehydroge 94.4 0.063 1.4E-06 48.0 4.9 36 135-170 2-37 (280)
422 PRK05086 malate dehydrogenase; 94.4 0.11 2.4E-06 48.4 6.7 55 137-191 1-81 (312)
423 PRK08278 short chain dehydroge 94.4 0.069 1.5E-06 48.0 5.1 38 133-170 3-40 (273)
424 PRK07806 short chain dehydroge 94.4 0.076 1.7E-06 46.4 5.3 36 134-169 4-39 (248)
425 PLN02778 3,5-epimerase/4-reduc 94.4 0.12 2.7E-06 47.4 6.9 54 135-188 8-66 (298)
426 COG0039 Mdh Malate/lactate deh 94.4 0.12 2.6E-06 48.4 6.7 54 137-191 1-81 (313)
427 PRK07411 hypothetical protein; 94.4 0.064 1.4E-06 51.6 5.1 35 133-168 35-70 (390)
428 PRK06113 7-alpha-hydroxysteroi 94.4 0.063 1.4E-06 47.4 4.7 37 133-169 8-44 (255)
429 PRK11863 N-acetyl-gamma-glutam 94.4 0.056 1.2E-06 50.6 4.5 76 137-212 3-85 (313)
430 PRK08643 acetoin reductase; Va 94.3 0.066 1.4E-06 47.1 4.8 34 136-169 2-35 (256)
431 PRK08226 short chain dehydroge 94.3 0.071 1.5E-06 47.1 5.0 37 134-170 4-40 (263)
432 PLN00141 Tic62-NAD(P)-related 94.3 0.067 1.4E-06 47.5 4.8 37 133-169 14-50 (251)
433 PRK12827 short chain dehydroge 94.3 0.073 1.6E-06 46.2 4.9 36 133-168 3-38 (249)
434 PRK07792 fabG 3-ketoacyl-(acyl 94.3 0.075 1.6E-06 48.8 5.2 39 131-169 7-45 (306)
435 PRK06079 enoyl-(acyl carrier p 94.3 0.074 1.6E-06 47.2 5.0 36 134-169 5-42 (252)
436 PF01113 DapB_N: Dihydrodipico 94.2 0.12 2.6E-06 41.5 5.7 49 138-187 2-75 (124)
437 cd08281 liver_ADH_like1 Zinc-d 94.2 0.13 2.8E-06 48.3 6.9 76 134-210 190-292 (371)
438 PRK07677 short chain dehydroge 94.2 0.067 1.5E-06 47.1 4.6 35 136-170 1-35 (252)
439 PRK09135 pteridine reductase; 94.2 0.07 1.5E-06 46.3 4.7 36 134-169 4-39 (249)
440 COG2072 TrkA Predicted flavopr 94.2 0.066 1.4E-06 52.3 4.9 38 132-170 171-208 (443)
441 PLN00106 malate dehydrogenase 94.2 0.18 3.9E-06 47.4 7.6 56 135-191 17-98 (323)
442 PRK07109 short chain dehydroge 94.2 0.046 9.9E-07 51.1 3.6 38 133-170 5-42 (334)
443 PF00070 Pyr_redox: Pyridine n 94.2 0.095 2.1E-06 38.4 4.7 32 138-170 1-32 (80)
444 PLN02730 enoyl-[acyl-carrier-p 94.2 0.087 1.9E-06 48.9 5.4 35 131-166 4-41 (303)
445 PRK12937 short chain dehydroge 94.2 0.086 1.9E-06 45.8 5.2 37 133-169 2-38 (245)
446 PRK08594 enoyl-(acyl carrier p 94.2 0.098 2.1E-06 46.7 5.6 36 133-169 4-42 (257)
447 PRK12936 3-ketoacyl-(acyl-carr 94.2 0.074 1.6E-06 46.2 4.7 37 133-169 3-39 (245)
448 PRK05993 short chain dehydroge 94.2 0.066 1.4E-06 48.1 4.5 36 135-170 3-38 (277)
449 cd05293 LDH_1 A subgroup of L- 94.2 0.14 2.9E-06 47.9 6.7 53 137-190 4-82 (312)
450 PRK07577 short chain dehydroge 94.2 0.097 2.1E-06 45.3 5.4 36 135-170 2-37 (234)
451 TIGR01963 PHB_DH 3-hydroxybuty 94.2 0.059 1.3E-06 47.1 4.1 35 136-170 1-35 (255)
452 TIGR01745 asd_gamma aspartate- 94.2 0.11 2.4E-06 49.7 6.1 76 137-212 1-101 (366)
453 PRK12769 putative oxidoreducta 94.1 0.12 2.7E-06 52.7 6.9 34 135-169 326-359 (654)
454 PRK08945 putative oxoacyl-(acy 94.1 0.048 1E-06 47.8 3.5 38 133-170 9-46 (247)
455 TIGR03026 NDP-sugDHase nucleot 94.1 0.19 4.2E-06 48.3 7.9 76 132-207 309-409 (411)
456 PRK00683 murD UDP-N-acetylmura 94.1 0.13 2.8E-06 49.6 6.7 104 135-265 2-127 (418)
457 PRK06153 hypothetical protein; 94.1 0.065 1.4E-06 51.6 4.4 78 133-211 173-301 (393)
458 cd01339 LDH-like_MDH L-lactate 94.1 0.12 2.7E-06 47.6 6.2 51 139-191 1-78 (300)
459 cd08253 zeta_crystallin Zeta-c 94.1 0.31 6.8E-06 43.4 8.7 90 121-210 130-245 (325)
460 cd05282 ETR_like 2-enoyl thioe 94.1 0.21 4.5E-06 45.2 7.6 93 118-210 121-239 (323)
461 PRK06701 short chain dehydroge 94.0 0.088 1.9E-06 48.0 5.1 38 132-169 42-79 (290)
462 PRK08267 short chain dehydroge 94.0 0.068 1.5E-06 47.3 4.3 34 137-170 2-35 (260)
463 PLN02653 GDP-mannose 4,6-dehyd 94.0 0.096 2.1E-06 48.5 5.4 36 133-168 3-38 (340)
464 PRK15182 Vi polysaccharide bio 94.0 0.13 2.8E-06 50.1 6.4 74 136-211 6-123 (425)
465 PRK11880 pyrroline-5-carboxyla 94.0 0.13 2.7E-06 46.3 6.0 52 137-189 3-72 (267)
466 cd00300 LDH_like L-lactate deh 94.0 0.12 2.7E-06 47.8 6.0 52 139-191 1-78 (300)
467 TIGR03451 mycoS_dep_FDH mycoth 94.0 0.14 2.9E-06 47.9 6.3 76 134-210 175-278 (358)
468 PRK12809 putative oxidoreducta 93.9 0.14 3.1E-06 52.2 6.9 34 135-169 309-342 (639)
469 PRK06720 hypothetical protein; 93.9 0.074 1.6E-06 45.1 4.1 42 132-173 12-53 (169)
470 TIGR01777 yfcH conserved hypot 93.9 0.14 3E-06 45.7 6.1 52 139-190 1-68 (292)
471 cd05294 LDH-like_MDH_nadp A la 93.9 0.17 3.7E-06 47.1 6.9 54 137-191 1-84 (309)
472 PRK07985 oxidoreductase; Provi 93.9 0.095 2.1E-06 47.8 5.1 36 133-168 46-81 (294)
473 PRK08642 fabG 3-ketoacyl-(acyl 93.9 0.1 2.2E-06 45.6 5.1 35 134-168 3-37 (253)
474 cd05290 LDH_3 A subgroup of L- 93.9 0.13 2.9E-06 47.9 6.0 53 138-191 1-80 (307)
475 COG0540 PyrB Aspartate carbamo 93.9 2.1 4.6E-05 40.1 13.7 144 22-185 57-230 (316)
476 PRK12779 putative bifunctional 93.9 0.11 2.3E-06 55.6 6.0 35 134-169 304-338 (944)
477 PRK15057 UDP-glucose 6-dehydro 93.8 0.14 3E-06 49.3 6.3 71 138-211 2-120 (388)
478 PRK06444 prephenate dehydrogen 93.8 0.13 2.9E-06 45.0 5.6 59 138-210 2-61 (197)
479 PRK08303 short chain dehydroge 93.8 0.1 2.2E-06 48.2 5.1 37 133-169 5-41 (305)
480 PRK06180 short chain dehydroge 93.8 0.078 1.7E-06 47.6 4.3 36 135-170 3-38 (277)
481 TIGR02622 CDP_4_6_dhtase CDP-g 93.8 0.099 2.1E-06 48.7 5.1 36 134-169 2-37 (349)
482 KOG2017 Molybdopterin synthase 93.8 0.13 2.8E-06 48.7 5.8 34 132-166 62-96 (427)
483 PLN02602 lactate dehydrogenase 93.8 0.17 3.8E-06 48.0 6.7 53 137-190 38-116 (350)
484 PRK12384 sorbitol-6-phosphate 93.7 0.098 2.1E-06 46.1 4.7 35 136-170 2-36 (259)
485 PRK08415 enoyl-(acyl carrier p 93.7 0.11 2.3E-06 47.1 5.0 35 134-169 3-40 (274)
486 PRK06483 dihydromonapterin red 93.7 0.095 2.1E-06 45.6 4.6 35 136-170 2-36 (236)
487 PRK07831 short chain dehydroge 93.7 0.11 2.3E-06 46.1 5.0 38 133-170 14-52 (262)
488 PLN02206 UDP-glucuronate decar 93.7 0.17 3.7E-06 49.4 6.7 37 132-168 115-151 (442)
489 PLN03154 putative allyl alcoho 93.7 0.22 4.7E-06 46.6 7.2 52 117-168 140-191 (348)
490 PRK12744 short chain dehydroge 93.7 0.095 2.1E-06 46.3 4.5 35 133-167 5-39 (257)
491 PRK07454 short chain dehydroge 93.7 0.086 1.9E-06 45.9 4.2 36 135-170 5-40 (241)
492 KOG1200 Mitochondrial/plastidi 93.6 0.13 2.9E-06 45.3 5.2 36 134-169 12-47 (256)
493 PRK12746 short chain dehydroge 93.6 0.081 1.8E-06 46.4 4.0 34 133-166 3-36 (254)
494 PRK02705 murD UDP-N-acetylmura 93.6 0.1 2.3E-06 50.6 5.0 125 138-265 2-134 (459)
495 PRK07791 short chain dehydroge 93.6 0.092 2E-06 47.7 4.3 36 134-169 4-39 (286)
496 PRK06128 oxidoreductase; Provi 93.6 0.12 2.6E-06 47.1 5.1 36 133-168 52-87 (300)
497 cd05280 MDR_yhdh_yhfp Yhdh and 93.6 0.25 5.4E-06 44.7 7.2 76 135-210 146-245 (325)
498 PRK07453 protochlorophyllide o 93.5 0.078 1.7E-06 48.8 3.8 37 133-169 3-39 (322)
499 COG0334 GdhA Glutamate dehydro 93.5 0.19 4.1E-06 48.6 6.4 53 116-169 183-239 (411)
500 cd01338 MDH_choloroplast_like 93.5 0.21 4.6E-06 46.8 6.7 55 137-191 3-90 (322)
No 1
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=100.00 E-value=5.5e-84 Score=581.69 Aligned_cols=259 Identities=54% Similarity=0.848 Sum_probs=250.8
Q ss_pred CCCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCC
Q 024103 2 KKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLD 81 (272)
Q Consensus 2 ~~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~ 81 (272)
+++.+++|+||+|++|+||+|..|+++|.|+|+++|+.++.+.||++++++||++.|++||+|++||||+||+|||+|+|
T Consensus 24 ~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I~~lN~D~~v~GIlVQlPLp~hld 103 (283)
T COG0190 24 KAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLD 103 (283)
T ss_pred HhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCC
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC
Q 024103 82 EGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA 161 (272)
Q Consensus 82 ~~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga 161 (272)
+++++++|+|+|||||||++|.|+|..+ ++.|+||||.|++++|++|+++++||+++|||||.+||||++++|++.||
T Consensus 104 ~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~na 181 (283)
T COG0190 104 EQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANA 181 (283)
T ss_pred HHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCC
Confidence 9999999999999999999999999865 77899999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceE
Q 024103 162 TVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASV 241 (272)
Q Consensus 162 ~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~ 241 (272)
|||+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++.+ .+|++|||||+++.+++++
T Consensus 182 TVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~vk~gavVIDVGinrv~---------~~kl~GDVdf~~v~~~a~~ 252 (283)
T COG0190 182 TVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVN---------DGKLVGDVDFDSVKEKASA 252 (283)
T ss_pred EEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccccCCCEEEecCCcccc---------CCceEeeccHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999986 2689999999999999999
Q ss_pred eccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 242 ITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 242 ~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
+|||||||||||++|||+|++++++++.+.
T Consensus 253 iTPVPGGVGPmTvamLl~Nt~~a~~~~~~~ 282 (283)
T COG0190 253 ITPVPGGVGPMTVAMLLENTLKAAERQRGE 282 (283)
T ss_pred cCCCCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999988764
No 2
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.2e-83 Score=581.34 Aligned_cols=256 Identities=43% Similarity=0.746 Sum_probs=246.9
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|+++.
T Consensus 28 ~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~ 107 (288)
T PRK14171 28 QTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKN 107 (288)
T ss_pred ccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|.|+++.|. .++|+||||.|++++|++|+++++||+|+|||||..||||++++|.++||||
T Consensus 108 ~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATV 186 (288)
T PRK14171 108 KILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSV 186 (288)
T ss_pred HHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 999999999999999999999999763 4789999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
|+||++|++|++++++|||||+|+|+|++++++|+|+|++|||+|+|+.+ ++|++|||||+++.++++++|
T Consensus 187 tichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~~~---------~gkl~GDVd~~~v~~~a~~iT 257 (288)
T PRK14171 187 TICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRIS---------GNKIIGDVDFENVKSKVKYIT 257 (288)
T ss_pred EEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccccC---------CCCeECCccHHHHHhhceEeC
Confidence 99999999999999999999999999999999999999999999999864 268999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
||||||||+|++|||+|+++++++.+
T Consensus 258 PVPGGVGp~T~a~L~~N~v~a~~~~~ 283 (288)
T PRK14171 258 PVPGGIGPMTIAFLLKNTVKAFKDSL 283 (288)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998654
No 3
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=3.8e-83 Score=591.95 Aligned_cols=265 Identities=78% Similarity=1.269 Sum_probs=250.6
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCH
Q 024103 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (272)
Q Consensus 3 ~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~ 82 (272)
++.|++|+||+|+||+||+|..|++.|.|+|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|+++
T Consensus 81 ~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP~hid~ 160 (345)
T PLN02897 81 KAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQHLDE 160 (345)
T ss_pred hccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024103 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (272)
Q Consensus 83 ~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~ 162 (272)
++++++|+|+|||||+|+.|.|+|+.+++.++|+||||.|++++|++|+++++||+|+|||||.+||+|++++|+++||+
T Consensus 161 ~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~AT 240 (345)
T PLN02897 161 SKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDAT 240 (345)
T ss_pred HHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCE
Confidence 99999999999999999999999987544478999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEe
Q 024103 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI 242 (272)
Q Consensus 163 V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~ 242 (272)
||+||++|+++++++++|||||+|+|+|++++++|||+|++|||+|+++.+ +++++.+.+++|||||+++.++++++
T Consensus 241 VTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~~~---~~~~~~g~klvGDVdfe~v~~~as~i 317 (345)
T PLN02897 241 VSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVE---DSSCEFGYRLVGDVCYEEALGVASAI 317 (345)
T ss_pred EEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccc---cccccCCCeeEecccHHHHHhhcccc
Confidence 999999999999999999999999999999999999999999999999964 22211123899999999999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 243 TPVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 243 tpvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
|||||||||+|++|||+|+++++++|+.
T Consensus 318 TPVPGGVGpmTvamLm~N~~~a~~~~~~ 345 (345)
T PLN02897 318 TPVPGGVGPMTITMLLCNTLDAAKRIFL 345 (345)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999974
No 4
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=6.4e-83 Score=592.69 Aligned_cols=266 Identities=71% Similarity=1.145 Sum_probs=251.4
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCH
Q 024103 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (272)
Q Consensus 3 ~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~ 82 (272)
++.|++|+||+|+||+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++
T Consensus 98 ~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~ 177 (364)
T PLN02616 98 ESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDE 177 (364)
T ss_pred HcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCH
Confidence 44588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024103 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (272)
Q Consensus 83 ~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~ 162 (272)
.+++++|+|+|||||+|+.|.|+|+.++..++|+||||.|++++|++|+++++||+|+|||||.+||||++++|.++||+
T Consensus 178 ~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~AT 257 (364)
T PLN02616 178 QNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDAT 257 (364)
T ss_pred HHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCe
Confidence 99999999999999999999999997643578999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEe
Q 024103 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI 242 (272)
Q Consensus 163 V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~ 242 (272)
||+||++|+++++++++|||||+|+|+|++++++|||+|++|||+|+++.+ ++.++.+.|++|||||+++.+++++|
T Consensus 258 VTicHs~T~nl~~~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~~~---~~~~~~g~klvGDVdfe~v~~~as~I 334 (364)
T PLN02616 258 VSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINPVE---DASSPRGYRLVGDVCYEEACKVASAV 334 (364)
T ss_pred EEEeCCCCCCHHHHHhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccccc---cccccCCCeEEecCcHHHHHhhcccc
Confidence 999999999999999999999999999999999999999999999999964 21111122899999999999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 243 TPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 243 tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
|||||||||+|++|||+|++++++++.+.
T Consensus 335 TPVPGGVGpmTva~Ll~N~~~aa~~~~~~ 363 (364)
T PLN02616 335 TPVPGGVGPMTIAMLLSNTLTSAKRIHNF 363 (364)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999998765
No 5
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.1e-83 Score=579.07 Aligned_cols=256 Identities=52% Similarity=0.891 Sum_probs=248.1
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+|++|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++++
T Consensus 28 ~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~ 107 (284)
T PRK14170 28 EGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEK 107 (284)
T ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~ 164 (272)
++++|+|+|||||+|+.|.|+|+.+ .++|+||||.|++++|++|+++++||+|+|||||.+||||++++|.++||+||
T Consensus 108 i~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt 185 (284)
T PRK14170 108 VIDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVT 185 (284)
T ss_pred HHhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEE
Confidence 9999999999999999999999976 56799999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEecc
Q 024103 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITP 244 (272)
Q Consensus 165 v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tp 244 (272)
+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++.+ +++++|||||+++.++++++||
T Consensus 186 ichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~~~---------~gkl~GDvdfe~~~~~a~~iTP 256 (284)
T PRK14170 186 IAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDE---------NNKLCGDVDFDDVVEEAGFITP 256 (284)
T ss_pred EeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccC---------CCCeecccchHHHHhhccEecC
Confidence 9999999999999999999999999999999999999999999999864 2689999999999999999999
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 245 VPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 245 vpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
|||||||+|++|||+|+++++++++..
T Consensus 257 VPGGVGpvT~a~L~~N~~~a~~~~~~~ 283 (284)
T PRK14170 257 VPGGVGPMTITMLLANTLKAAKRIWKM 283 (284)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999988753
No 6
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.5e-82 Score=579.54 Aligned_cols=266 Identities=50% Similarity=0.816 Sum_probs=250.5
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCH
Q 024103 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (272)
Q Consensus 3 ~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~ 82 (272)
++.|++|+|++|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++
T Consensus 28 ~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~ 107 (297)
T PRK14168 28 EKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINE 107 (297)
T ss_pred HcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCH
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC---
Q 024103 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH--- 159 (272)
Q Consensus 83 ~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~--- 159 (272)
++++++|+|+|||||+|+.|+|+|+.|+..++|+||||.|++++|++|+++++||+|+|||||..||||++++|.++
T Consensus 108 ~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~ 187 (297)
T PRK14168 108 KKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPG 187 (297)
T ss_pred HHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccC
Confidence 99999999999999999999999998754478999999999999999999999999999999999999999999998
Q ss_pred -CCEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhh
Q 024103 160 -HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL 238 (272)
Q Consensus 160 -ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~ 238 (272)
||+||+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++.. +..+.++.+++|||||+++.++
T Consensus 188 ~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~~~---~~~~~g~~~~~GDVdfe~v~~~ 264 (297)
T PRK14168 188 ANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNRVG---TNESTGKAILSGDVDFDAVKEI 264 (297)
T ss_pred CCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCccC---ccccCCCcceeccccHHHHHhh
Confidence 799999999999999999999999999999999999999999999999999853 1111111249999999999999
Q ss_pred ceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 239 ASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 239 ~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
++++|||||||||+|++|||+|+++++++|+++
T Consensus 265 a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~~ 297 (297)
T PRK14168 265 AGKITPVPGGVGPMTIAMLMRNTLKSAKFHLSL 297 (297)
T ss_pred ccEecCCCCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999985
No 7
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.4e-82 Score=578.43 Aligned_cols=261 Identities=44% Similarity=0.731 Sum_probs=248.0
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|++++
T Consensus 28 ~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~ 107 (294)
T PRK14187 28 QHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKN 107 (294)
T ss_pred ccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|.|+|+.|+..++|+||||.|++++|++|+++++||+|+|||||..||+|++++|+++||||
T Consensus 108 ~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTV 187 (294)
T PRK14187 108 LIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTV 187 (294)
T ss_pred HHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEE
Confidence 99999999999999999999999987534689999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
|+||++|+++++++++|||||+|+|+|++++++||++|++|||+|+++.+ +.. ..+++|||||+++.++++++|
T Consensus 188 t~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~~~---~~~---~~kl~GDvd~e~v~~~a~~iT 261 (294)
T PRK14187 188 TTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIE---EGG---VKKFVGDVDFAEVKKKASAIT 261 (294)
T ss_pred EEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccC---CCC---ccceeCCccHHHHhhhccEec
Confidence 99999999999999999999999999999999999999999999999964 100 028999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
||||||||+|++|||+|++++++++.+
T Consensus 262 PVPGGVGp~T~a~L~~N~~~a~~~~~~ 288 (294)
T PRK14187 262 PVPGGVGPMTIAFLMVNTVIAACNQKG 288 (294)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999987653
No 8
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.2e-82 Score=575.14 Aligned_cols=255 Identities=49% Similarity=0.785 Sum_probs=246.2
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+||+|++|+||+|..|++.|.|.|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|+++++
T Consensus 27 ~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~ 106 (282)
T PRK14166 27 KGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDL 106 (282)
T ss_pred CCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~ 164 (272)
++++|+|+|||||+|+.|+|+|+.|. .++|+||||+|++++|++|+++++||+|+|||||..||||++++|.++||+||
T Consensus 107 i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt 185 (282)
T PRK14166 107 ILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVS 185 (282)
T ss_pred HHhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEE
Confidence 99999999999999999999999763 46799999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEecc
Q 024103 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITP 244 (272)
Q Consensus 165 v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tp 244 (272)
+||++|+++++++++|||||+|+|+|++++++||++|++|||+|+++.. +++++|||||+++.++++++||
T Consensus 186 ~chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~~~---------~gkl~GDVd~~~v~~~a~~iTP 256 (282)
T PRK14166 186 VCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLE---------SGKIVGDVDFEEVSKKSSYITP 256 (282)
T ss_pred EeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccccC---------CCCeeCCCCHHHHHhhccEecC
Confidence 9999999999999999999999999999999999999999999999863 2589999999999999999999
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 245 VPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 245 vpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
|||||||+|++|||+|+++++++..
T Consensus 257 VPGGVGp~T~a~L~~N~v~a~~~~~ 281 (282)
T PRK14166 257 VPGGVGPMTIAMLLENTVKSAKNRL 281 (282)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998754
No 9
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.5e-82 Score=574.90 Aligned_cols=254 Identities=44% Similarity=0.729 Sum_probs=246.3
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHH
Q 024103 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (272)
Q Consensus 6 ~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i 85 (272)
|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|++++++
T Consensus 28 g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i 107 (282)
T PRK14169 28 DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAV 107 (282)
T ss_pred CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024103 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (272)
Q Consensus 86 ~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v 165 (272)
+++|+|+|||||+|+.|+|+|+.+ .++|+||||+|++++|++|+++++||+|+|||||..||||++++|.++||+||+
T Consensus 108 ~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVti 185 (282)
T PRK14169 108 IDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTI 185 (282)
T ss_pred HhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEE
Confidence 999999999999999999999976 578999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccC
Q 024103 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPV 245 (272)
Q Consensus 166 ~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpv 245 (272)
||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++.. +++++|||||+++.++++++|||
T Consensus 186 chs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~~~---------~gkl~GDVd~~~v~~~a~~iTPV 256 (282)
T PRK14169 186 AHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISRGA---------DGKLLGDVDEAAVAPIASAITPV 256 (282)
T ss_pred ECCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccccC---------CCCeeecCcHHHHHhhccEecCC
Confidence 999999999999999999999999999999999999999999999853 25899999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 246 PGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 246 pGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
||||||+|++|||+|+++++++..+
T Consensus 257 PGGVGp~T~a~L~~N~~~a~~~~~~ 281 (282)
T PRK14169 257 PGGVGPMTIASLMAQTVTLAKRRAN 281 (282)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999987643
No 10
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=100.00 E-value=4e-82 Score=578.20 Aligned_cols=265 Identities=63% Similarity=1.052 Sum_probs=250.1
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCH
Q 024103 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (272)
Q Consensus 3 ~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~ 82 (272)
++.|++|+|++|++|+||+|..|++.|.|+|+++||+++.++||++++++|+++.|++||+|++||||+||+|||+|+++
T Consensus 34 ~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~ 113 (299)
T PLN02516 34 EKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINE 113 (299)
T ss_pred HcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024103 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (272)
Q Consensus 83 ~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~ 162 (272)
++++++|+|+|||||+|+.|+|+|+.++..++|+||||.|++++|++|+++++||+|+|||||.+||||++++|.++|||
T Consensus 114 ~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~AT 193 (299)
T PLN02516 114 EKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADAT 193 (299)
T ss_pred HHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCE
Confidence 99999999999999999999999987643578999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEe
Q 024103 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI 242 (272)
Q Consensus 163 V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~ 242 (272)
||+||++|+++++++++|||||+|+|+|++++++|||+|++|||+|+++.+ ++....+.+++|||||+++.++++++
T Consensus 194 Vtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~~~---~~~~~~g~kl~GDvd~e~v~~~a~~i 270 (299)
T PLN02516 194 VTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVS---DPSKKSGYRLVGDVDFAEVSKVAGWI 270 (299)
T ss_pred EEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccccC---cccccCCCceEcCcChHHhhhhceEe
Confidence 999999999999999999999999999999999999999999999999864 21111123899999999999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 243 TPVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 243 tpvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
|||||||||+|++|||+|+++++++|+.
T Consensus 271 TPVPGGVGp~T~a~L~~N~v~a~~~~~~ 298 (299)
T PLN02516 271 TPVPGGVGPMTVAMLLKNTVDGAKRVFA 298 (299)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999974
No 11
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.3e-82 Score=573.84 Aligned_cols=254 Identities=49% Similarity=0.774 Sum_probs=246.0
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++.+
T Consensus 27 ~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~ 106 (282)
T PRK14182 27 RGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERA 106 (282)
T ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCc-cccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPL-FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~-~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
++++|+|+|||||+|+.|+|+|+.| ..+ |+||||.|++++|++|+++++||+|+|||||..||+|+++||.++||+|
T Consensus 107 i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtV 184 (282)
T PRK14182 107 VLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATV 184 (282)
T ss_pred HHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 9999999999999999999999977 344 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
|+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++.. +++++|||||+++.++++++|
T Consensus 185 tichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~~~---------~gkl~GDVd~~~v~~~a~~iT 255 (282)
T PRK14182 185 TIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLA---------DGKLVGDVEFAAAAARASAIT 255 (282)
T ss_pred EEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeeceecC---------CCCeeCCCCHHHHHhhccEec
Confidence 99999999999999999999999999999999999999999999999863 258999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
||||||||+|++|||+|+++++++|-
T Consensus 256 PVPGGVGp~T~a~L~~N~~~~~~~~~ 281 (282)
T PRK14182 256 PVPGGVGPMTRAMLLVNTVELAKRTA 281 (282)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999884
No 12
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7e-82 Score=575.15 Aligned_cols=260 Identities=47% Similarity=0.779 Sum_probs=246.6
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCH
Q 024103 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (272)
Q Consensus 3 ~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~ 82 (272)
++.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++
T Consensus 26 ~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~ 105 (293)
T PRK14185 26 AKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISE 105 (293)
T ss_pred hccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC---
Q 024103 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH--- 159 (272)
Q Consensus 83 ~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~--- 159 (272)
++++++|+|+|||||+|+.|.|+|+.+ .++|+||||+|++++|++|+++++||+|+|||||.+||||++++|.++
T Consensus 106 ~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~ 183 (293)
T PRK14185 106 QKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYP 183 (293)
T ss_pred HHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCC
Confidence 999999999999999999999999976 578999999999999999999999999999999999999999999998
Q ss_pred -CCEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCc-eEecccchhhhhh
Q 024103 160 -HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGY-RLMGDVCYEEAMR 237 (272)
Q Consensus 160 -ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~-k~~Gdvd~~~~~~ 237 (272)
+||||+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++.+ ++. .+.+ +++|||||+++.+
T Consensus 184 ~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~---~~~-~~~g~klvGDVdf~~v~~ 259 (293)
T PRK14185 184 GDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVP---DAT-RKSGFKLTGDVKFDEVAP 259 (293)
T ss_pred CCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCcccc---ccc-ccCCCeeEcCCCHHHHHh
Confidence 799999999999999999999999999999999999999999999999999864 211 1124 8999999999999
Q ss_pred hceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 024103 238 LASVITPVPGGVGPMTVAMLLSNTLDSAKRA 268 (272)
Q Consensus 238 ~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~ 268 (272)
+++++|||||||||+|++|||+|+++++++.
T Consensus 260 ~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 290 (293)
T PRK14185 260 KCSYITPVPGGVGPMTIVSLMKNTLLAGKKA 290 (293)
T ss_pred hccEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754
No 13
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.3e-81 Score=572.20 Aligned_cols=254 Identities=52% Similarity=0.835 Sum_probs=247.4
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHH
Q 024103 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (272)
Q Consensus 6 ~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i 85 (272)
|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|++++++
T Consensus 30 g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i 109 (284)
T PRK14190 30 GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAV 109 (284)
T ss_pred CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024103 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (272)
Q Consensus 86 ~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v 165 (272)
+++|+|+|||||+|+.|.|+++.| .++|+||||.|++++|++|+++++||+|+|||||..||||++++|+++||+||+
T Consensus 110 ~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~ 187 (284)
T PRK14190 110 IERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTY 187 (284)
T ss_pred HhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEE
Confidence 999999999999999999999976 578999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccC
Q 024103 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPV 245 (272)
Q Consensus 166 ~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpv 245 (272)
||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++.+ ++|++|||||+++.++++++|||
T Consensus 188 chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~~~---------~gkl~GDvd~e~v~~~a~~iTPV 258 (284)
T PRK14190 188 CHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRLE---------NGKLCGDVDFDNVKEKASYITPV 258 (284)
T ss_pred EeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccccC---------CCCeeccCcHHHHhhhceEecCC
Confidence 999999999999999999999999999999999999999999999864 25899999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 246 PGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 246 pGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
||||||+|++|||+|+++++++|.+
T Consensus 259 PGGVGpvT~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14190 259 PGGVGPMTITMLMHNTVELAKRAGG 283 (284)
T ss_pred CCCChHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999875
No 14
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.2e-81 Score=571.47 Aligned_cols=255 Identities=44% Similarity=0.709 Sum_probs=246.6
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++++|+++.|++||+|++||||+||+|||+|+++.
T Consensus 27 ~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~ 106 (282)
T PRK14180 27 HTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKN 106 (282)
T ss_pred ccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|.|+++.|+ ..+|+||||+|++++|++|+++++||+|+|||||..||+|++++|.++||||
T Consensus 107 ~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATV 185 (282)
T PRK14180 107 NVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATV 185 (282)
T ss_pred HHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 999999999999999999999999763 3679999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
|+||++|+++.+++++|||||+|+|+|++++++||++|++|||+|+++.+ ++++|||||+++.++++++|
T Consensus 186 t~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~----------gkl~GDvd~~~v~~~a~~iT 255 (282)
T PRK14180 186 TTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD----------GKIVGDVDFAAVKDKVAAIT 255 (282)
T ss_pred EEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccccC----------CceeCCcCHHHHHhhccEec
Confidence 99999999999999999999999999999999999999999999999864 58999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
||||||||+|++|||+|+++++++++
T Consensus 256 PVPGGVGp~T~a~L~~Nl~~a~~~~~ 281 (282)
T PRK14180 256 PVPGGVGPMTITELLYNTFQCAQELN 281 (282)
T ss_pred cCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998765
No 15
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.6e-81 Score=574.13 Aligned_cols=261 Identities=47% Similarity=0.772 Sum_probs=248.1
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++++
T Consensus 28 ~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~ 107 (297)
T PRK14167 28 AGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDRE 107 (297)
T ss_pred CCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC----C
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----H 160 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~----g 160 (272)
++++|+|+|||||+|+.|.|+++.| .+.|.||||+|++++|++|+++++||+|+|||||..||||++++|.++ +
T Consensus 108 i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~ 185 (297)
T PRK14167 108 VLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGN 185 (297)
T ss_pred HHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCC
Confidence 9999999999999999999999976 578999999999999999999999999999999999999999999998 8
Q ss_pred CEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhce
Q 024103 161 ATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLAS 240 (272)
Q Consensus 161 a~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~ 240 (272)
||||+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+|+.+ ++ +..+.+++|||||+++.++++
T Consensus 186 aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gaiVIDvGin~~~---~~-~~~g~kl~GDVd~e~v~~~a~ 261 (297)
T PRK14167 186 ATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGINRVD---AD-TEKGYELVGDVEFESAKEKAS 261 (297)
T ss_pred CEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccC---cc-cccCCceeecCcHHHHHhhce
Confidence 99999999999999999999999999999999999999999999999999964 11 111228999999999999999
Q ss_pred EeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 241 VITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 241 ~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
++|||||||||+|++|||+|++++++++++.
T Consensus 262 ~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 292 (297)
T PRK14167 262 AITPVPGGVGPMTRAMLLYNTVKAASLQEGV 292 (297)
T ss_pred EecCCCCCchHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999988764
No 16
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1e-81 Score=570.81 Aligned_cols=248 Identities=39% Similarity=0.703 Sum_probs=241.5
Q ss_pred CCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHH
Q 024103 7 KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL 86 (272)
Q Consensus 7 ~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~ 86 (272)
.+|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++++++
T Consensus 31 ~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~ 110 (278)
T PRK14172 31 SIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKIT 110 (278)
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024103 87 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (272)
Q Consensus 87 ~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~ 166 (272)
++|+|+|||||+|+.|.|+++.| .++|+||||+|++++|++|+++++||+|+|||||..||+|++++|.++||+||+|
T Consensus 111 ~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~c 188 (278)
T PRK14172 111 NKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTIC 188 (278)
T ss_pred hccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEe
Confidence 99999999999999999999977 5679999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCC
Q 024103 167 HALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVP 246 (272)
Q Consensus 167 ~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvp 246 (272)
|++|+++.+++++|||||+|+|+|++++++|+|+|++|||+|+++.+ ++++|||||+++.+++++|||||
T Consensus 189 hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~----------gkl~GDvd~~~v~~~a~~iTPVP 258 (278)
T PRK14172 189 HSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVN----------GKITGDVNFDKVIDKASYITPVP 258 (278)
T ss_pred CCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccccC----------CceeeeccHHHHHhhccEecCCC
Confidence 99999999999999999999999999999999999999999999864 58999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHH
Q 024103 247 GGVGPMTVAMLLSNTLDSAK 266 (272)
Q Consensus 247 GGvGp~T~amL~~n~v~a~~ 266 (272)
|||||+|++|||+|++++++
T Consensus 259 GGVGp~T~a~L~~N~~~a~~ 278 (278)
T PRK14172 259 GGVGSLTTTLLIKNVCEALK 278 (278)
T ss_pred CCccHHHHHHHHHHHHHhcC
Confidence 99999999999999999864
No 17
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.5e-81 Score=571.80 Aligned_cols=256 Identities=48% Similarity=0.760 Sum_probs=247.8
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|++++
T Consensus 27 ~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~ 106 (286)
T PRK14184 27 RHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQ 106 (286)
T ss_pred ccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHH
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----C
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----H 159 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~----~ 159 (272)
+++++|+|+|||||+|+.|.|+|+.+ .+.|+||||.|++++|++|+++++||+|+|||||.+||+|++++|.+ +
T Consensus 107 ~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~ 184 (286)
T PRK14184 107 RCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFA 184 (286)
T ss_pred HHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccC
Confidence 99999999999999999999999976 57799999999999999999999999999999999999999999999 8
Q ss_pred CCEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhc
Q 024103 160 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLA 239 (272)
Q Consensus 160 ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~ 239 (272)
||+|++||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++.+ ++++|||||+++.+++
T Consensus 185 ~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~~~----------~~l~GDVdf~~v~~~a 254 (286)
T PRK14184 185 NATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTD----------DGLVGDCDFEGLSDVA 254 (286)
T ss_pred CCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeeccC----------CCccCCccHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999965 3699999999999999
Q ss_pred eEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 240 SVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 240 ~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
+++|||||||||+|++|||+|+++++++..|+
T Consensus 255 ~~iTPVPGGVGp~Tva~Ll~N~~~a~~~~~~~ 286 (286)
T PRK14184 255 SAITPVPGGVGPMTIAQLLVNTVQSWKERVGL 286 (286)
T ss_pred eEecCCCCCChHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999988774
No 18
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.7e-81 Score=571.09 Aligned_cols=259 Identities=44% Similarity=0.731 Sum_probs=245.6
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.+++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++++
T Consensus 23 l~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~ 102 (287)
T PRK14181 23 SSTAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQA 102 (287)
T ss_pred hCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC----C
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----H 160 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~----g 160 (272)
++++|+|+|||||+|+.|+|+|+.|+ .+.|+||||+|++++|++|+++++||+|+|||||.+||||++++|+++ |
T Consensus 103 i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~ 181 (287)
T PRK14181 103 ILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTN 181 (287)
T ss_pred HHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCC
Confidence 99999999999999999999999773 467999999999999999999999999999999999999999999999 8
Q ss_pred CEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhce
Q 024103 161 ATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLAS 240 (272)
Q Consensus 161 a~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~ 240 (272)
|+||+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++.. +... ++.+++|||||+++.++++
T Consensus 182 AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~~~---~~~~-~g~kl~GDVd~e~~~~~a~ 257 (287)
T PRK14181 182 ATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVP---AANP-KGYILVGDVDFNNVVPKCR 257 (287)
T ss_pred CEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccc---cccC-CCCeeEeccchHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999853 1110 1128999999999999999
Q ss_pred EeccCCCcccHHHHHHHHHHHHHHHHHH
Q 024103 241 VITPVPGGVGPMTVAMLLSNTLDSAKRA 268 (272)
Q Consensus 241 ~~tpvpGGvGp~T~amL~~n~v~a~~~~ 268 (272)
++|||||||||+|++|||+|++++++++
T Consensus 258 ~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 285 (287)
T PRK14181 258 AITPVPGGVGPMTVAMLMRNTWESYLRH 285 (287)
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999875
No 19
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.5e-81 Score=572.89 Aligned_cols=261 Identities=49% Similarity=0.757 Sum_probs=248.2
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCH
Q 024103 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (272)
Q Consensus 3 ~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~ 82 (272)
++.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++
T Consensus 27 ~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~ 106 (297)
T PRK14186 27 PKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDE 106 (297)
T ss_pred HhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024103 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (272)
Q Consensus 83 ~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~ 162 (272)
++++++|+|+|||||+|+.|.|+++.| ...|.||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+
T Consensus 107 ~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~at 184 (297)
T PRK14186 107 VPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANAT 184 (297)
T ss_pred HHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCE
Confidence 999999999999999999999999976 467999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEe
Q 024103 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI 242 (272)
Q Consensus 163 V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~ 242 (272)
||+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++.+ ++. .+++++|||||+++.++++++
T Consensus 185 Vtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~---~~~--~~gkl~GDvd~~~v~~~a~~i 259 (297)
T PRK14186 185 VTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHRLP---SSD--GKTRLCGDVDFEEVEPVAAAI 259 (297)
T ss_pred EEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccc---ccc--cCCceeCCccHHHHHhhceEe
Confidence 999999999999999999999999999999999999999999999999853 111 125899999999999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 243 TPVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 243 tpvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
|||||||||+|++|||+|++++++++.+
T Consensus 260 TPVPGGVGp~T~a~L~~Nl~~a~~~~~~ 287 (297)
T PRK14186 260 TPVPGGVGPMTVTMLLVNTVLSWQKRHG 287 (297)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999987653
No 20
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6.3e-81 Score=565.94 Aligned_cols=252 Identities=50% Similarity=0.806 Sum_probs=244.9
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+|++|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++.+
T Consensus 28 ~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~ 107 (281)
T PRK14183 28 KNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTK 107 (281)
T ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~ 164 (272)
++++|+|+|||||+|+.|.|+++.| .++|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+||
T Consensus 108 i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVt 185 (281)
T PRK14183 108 ILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVD 185 (281)
T ss_pred HHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEE
Confidence 9999999999999999999999977 57899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEecc
Q 024103 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITP 244 (272)
Q Consensus 165 v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tp 244 (272)
+||++|+++.+++++|||||+|+|+|++++++||++|++|||+|+++.+ ++|++|||||+++.++++++||
T Consensus 186 i~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~~~---------~gkl~GDVd~~~~~~~a~~iTP 256 (281)
T PRK14183 186 ICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTE---------DGRLVGDVDFENVAKKCSYITP 256 (281)
T ss_pred EeCCCCcCHHHHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccccC---------CCCeECCccHHHHHhhceEecC
Confidence 9999999999999999999999999999999999999999999999864 2689999999999999999999
Q ss_pred CCCcccHHHHHHHHHHHHHHHHH
Q 024103 245 VPGGVGPMTVAMLLSNTLDSAKR 267 (272)
Q Consensus 245 vpGGvGp~T~amL~~n~v~a~~~ 267 (272)
|||||||+|++|||+|+++++++
T Consensus 257 VPGGVGpvT~a~L~~N~~~a~~~ 279 (281)
T PRK14183 257 VPGGVGPMTIAMLLSNTLKAAKN 279 (281)
T ss_pred CCCCChHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999875
No 21
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-80 Score=565.52 Aligned_cols=254 Identities=46% Similarity=0.783 Sum_probs=244.6
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+||+|++|+|++|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++.+
T Consensus 29 ~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~ 108 (284)
T PRK14193 29 KGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENA 108 (284)
T ss_pred CCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh--CCCE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR--HHAT 162 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~--~ga~ 162 (272)
++++|+|+|||||+|+.|.|+|+.+ ...|+||||.|++++|++|+++++||+|+|||||..||+|++++|++ +||+
T Consensus 109 i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~at 186 (284)
T PRK14193 109 VLERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENAT 186 (284)
T ss_pred HHhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCE
Confidence 9999999999999999999999976 46789999999999999999999999999999999999999999998 7999
Q ss_pred EEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEe
Q 024103 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI 242 (272)
Q Consensus 163 V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~ 242 (272)
||+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++.. +++++|||| +++.++++++
T Consensus 187 Vtvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~~~---------~gkl~GDvd-~~v~~~a~~i 256 (284)
T PRK14193 187 VTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSRAG---------DGKLVGDVH-PDVWEVAGAV 256 (284)
T ss_pred EEEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccccC---------CCcEEeecC-HhHHhhCCEE
Confidence 999999999999999999999999999999999999999999999999953 268999999 8889999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 243 TPVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 243 tpvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
|||||||||+|++|||+|+++++++..|
T Consensus 257 TPVPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (284)
T PRK14193 257 SPNPGGVGPMTRAFLLTNVVERAERRAG 284 (284)
T ss_pred eCCCCChhHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999987644
No 22
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2e-80 Score=564.63 Aligned_cols=255 Identities=50% Similarity=0.815 Sum_probs=247.5
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHH
Q 024103 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (272)
Q Consensus 6 ~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i 85 (272)
|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++++|+++.|++||+|++||||+||+|||+|++++++
T Consensus 30 g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i 109 (285)
T PRK14189 30 GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKV 109 (285)
T ss_pred CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024103 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (272)
Q Consensus 86 ~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v 165 (272)
+++|+|+|||||+|+.|.|+++.+ .+.|+||||.|++++|++|+++++||+|+|||+|.+||+|++++|.++|++|++
T Consensus 110 ~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~ 187 (285)
T PRK14189 110 IEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTI 187 (285)
T ss_pred HhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEE
Confidence 999999999999999999999976 578999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccC
Q 024103 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPV 245 (272)
Q Consensus 166 ~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpv 245 (272)
||++|+++.+++++|||||+|+|+|++++++|+|+|++|||+|+++.. +++++|||||+++.++++++|||
T Consensus 188 ~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~~~---------~gkl~GDVd~~~v~~~a~~iTPV 258 (285)
T PRK14189 188 CHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDD---------AGKLCGDVDFAGVKEVAGYITPV 258 (285)
T ss_pred ecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccccC---------CCCeeCCccHHHHHhhceEecCC
Confidence 999999999999999999999999999999999999999999999864 26899999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 246 PGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 246 pGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
||||||+|++|||+|++++++++...
T Consensus 259 PGGVGp~T~a~Ll~N~~~a~~~~~~~ 284 (285)
T PRK14189 259 PGGVGPMTITMLLVNTIEAAERAAAA 284 (285)
T ss_pred CCCchHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999988753
No 23
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-80 Score=565.10 Aligned_cols=251 Identities=43% Similarity=0.744 Sum_probs=242.7
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.+.+|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++++||++.|++||+|++||||+||+|||+|+++.
T Consensus 29 ~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~ 108 (284)
T PRK14177 29 KNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDER 108 (284)
T ss_pred cCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHH
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|.|+|+.| .+.|+||||+|++++|++|+++++||+|+|||||.+||||++++|.++||+|
T Consensus 109 ~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atV 186 (284)
T PRK14177 109 AAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATV 186 (284)
T ss_pred HHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 99999999999999999999999976 5679999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
|+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+++ +++|||||+++.++++++|
T Consensus 187 t~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~-------------~~~GDVd~~~v~~~a~~iT 253 (284)
T PRK14177 187 TLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP-------------GNVGDIEISKAKDKSSFYT 253 (284)
T ss_pred EEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc-------------cccCCcCHHHHhhhccEec
Confidence 999999999999999999999999999999999999999999999986 3689999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
||||||||+|++|||+|+++++++..
T Consensus 254 PVPGGVGp~T~a~L~~N~~~a~~~~~ 279 (284)
T PRK14177 254 PVPGGVGPMTIAVLLLQTLYSFKEHF 279 (284)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999987654
No 24
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.9e-80 Score=564.35 Aligned_cols=253 Identities=44% Similarity=0.780 Sum_probs=244.9
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|+++.
T Consensus 34 ~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~ 113 (287)
T PRK14176 34 NRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQ 113 (287)
T ss_pred ccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|.|+|+.| .+.|+||||+|++++|++|+++++||+|+|||||..||+|++++|.++||+|
T Consensus 114 ~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atV 191 (287)
T PRK14176 114 EAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATV 191 (287)
T ss_pred HHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEE
Confidence 99999999999999999999999976 5679999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
|+||++|+++++++++|||||+|+|+|++++++|+++|++|||+|+++.+ +|++|||||+++.++++++|
T Consensus 192 tv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~~~----------gkl~GDvd~~~~~~~a~~iT 261 (287)
T PRK14176 192 SVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITKEE----------DKVYGDVDFENVIKKASLIT 261 (287)
T ss_pred EEEeccCCCHHHHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccccC----------CCccCCcCHHHHHhhceEcC
Confidence 99999999999999999999999999999999999999999999999754 68999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHH
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRA 268 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~ 268 (272)
||||||||+|++|||+|+++++++.
T Consensus 262 PVPGGVGp~T~a~L~~n~~~a~~~~ 286 (287)
T PRK14176 262 PVPGGVGPLTIAMLMKHVLMCAEKS 286 (287)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998753
No 25
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.1e-80 Score=564.05 Aligned_cols=255 Identities=49% Similarity=0.770 Sum_probs=246.6
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++.
T Consensus 27 ~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~ 106 (285)
T PRK14191 27 QTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTK 106 (285)
T ss_pred cCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|+|+|+.| .++|+||||+|++++|++|+++++||+|+|||+|..||+|++++|.++||+|
T Consensus 107 ~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtV 184 (285)
T PRK14191 107 MVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASV 184 (285)
T ss_pred HHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEE
Confidence 99999999999999999999999976 5789999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
++||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++.+ ++|++|||||+++.++++++|
T Consensus 185 tv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~~~---------~gklvGDvd~e~v~~~a~~iT 255 (285)
T PRK14191 185 SVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLN---------DGRLVGDVDFENVAPKASFIT 255 (285)
T ss_pred EEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeeccccc---------CCceeccccHHHHhhhccEEe
Confidence 99999999999999999999999999999999999999999999999864 268999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
||||||||+|++|||+|+++++++..
T Consensus 256 PVPGGVGpvT~a~L~~N~~~a~~~~~ 281 (285)
T PRK14191 256 PVPGGVGPMTIVSLLENTLIAAEKRQ 281 (285)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998653
No 26
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2e-80 Score=564.14 Aligned_cols=256 Identities=49% Similarity=0.800 Sum_probs=247.6
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.+++|+||+|+||+||+|..|++.|.|+|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|+++.
T Consensus 29 ~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~ 108 (285)
T PRK10792 29 AGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNV 108 (285)
T ss_pred cCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHH
Confidence 34778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|.|+|+.| .++|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+|
T Consensus 109 ~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atV 186 (285)
T PRK10792 109 KVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTV 186 (285)
T ss_pred HHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeE
Confidence 99999999999999999999999876 5679999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
|+||++|+++++++++|||||+|+|+|++++++|+++|++|||+|+++.+ +++++|||||+++.++++++|
T Consensus 187 tv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~~~---------~gk~~GDvd~~~~~~~a~~it 257 (285)
T PRK10792 187 TVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLE---------DGKLVGDVEFETAAERASWIT 257 (285)
T ss_pred EEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHcCCCcEEEEccccccc---------CCCcCCCcCHHHHHhhccCcC
Confidence 99999999999999999999999999999999999999999999999864 258999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
||||||||+|++|||+|+++++++|..
T Consensus 258 PvPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (285)
T PRK10792 258 PVPGGVGPMTVATLLENTLQACEEYHD 284 (285)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999864
No 27
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6e-80 Score=561.50 Aligned_cols=255 Identities=45% Similarity=0.740 Sum_probs=243.5
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.+++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++.+
T Consensus 26 l~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~ 105 (287)
T PRK14173 26 LPFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQR 105 (287)
T ss_pred hCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~ 164 (272)
++++|+|+|||||+|+.|.|+|+.| .+.|+||||+|++++|++|+++++||+|+|||||..||+|++++|.++||+||
T Consensus 106 i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt 183 (287)
T PRK14173 106 VLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVT 183 (287)
T ss_pred HHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEE
Confidence 9999999999999999999999976 46799999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCce--EecccchhhhhhhceEe
Q 024103 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYR--LMGDVCYEEAMRLASVI 242 (272)
Q Consensus 165 v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k--~~Gdvd~~~~~~~~~~~ 242 (272)
+||++|+++++++++|||||+|+|+|++++++|||+|++|||+|+++.. ++ +++ ++|||| .++.++++++
T Consensus 184 ichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~~~---~~----~gk~~l~GDVd-~~v~~~a~~i 255 (287)
T PRK14173 184 LAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRVG---GN----GGRDILTGDVH-PEVAEVAGAL 255 (287)
T ss_pred EeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccc---CC----CCceeeecccc-HhHHhhCcEE
Confidence 9999999999999999999999999999999999999999999999852 10 246 999999 5789999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 243 TPVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 243 tpvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
|||||||||+|++|||+|+++++++..
T Consensus 256 TPVPGGVGp~T~a~L~~N~~~a~~~~~ 282 (287)
T PRK14173 256 TPVPGGVGPMTVAMLMANTVIAALRRR 282 (287)
T ss_pred ecCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999998754
No 28
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.5e-80 Score=560.19 Aligned_cols=255 Identities=48% Similarity=0.796 Sum_probs=247.6
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++++|+++.|++||+|++||||+||+|||+|++++
T Consensus 28 ~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~ 107 (284)
T PRK14179 28 EKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEE 107 (284)
T ss_pred ccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHH
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|.|+++.+ .++|+||||.|++++|++|+++++||+|+|||+|+.||+|++++|+++|++|
T Consensus 108 ~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatV 185 (284)
T PRK14179 108 KILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATV 185 (284)
T ss_pred HHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEE
Confidence 99999999999999999999999976 5779999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
++||++++++++.+++|||||+|+|.|++++++|+++|++|||+|+++.. +++++|||||+++.++++++|
T Consensus 186 tv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~~~---------~gkl~GDVdf~~v~~~a~~iT 256 (284)
T PRK14179 186 TLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNRDE---------NGKLIGDVDFDEVAEVASYIT 256 (284)
T ss_pred EEECCCCCCHHHHHhhCCEEEEecCccccCCHHHccCCcEEEEecceecC---------CCCeecCccHHHHHhhccEec
Confidence 99999999999999999999999999999999999999999999999864 268999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
||||||||+|++|||+|+++++++|+
T Consensus 257 PVPGGVGp~T~a~L~~N~~~a~~~~~ 282 (284)
T PRK14179 257 PVPGGVGPMTITMLMEQTYQAALRSL 282 (284)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999997
No 29
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.7e-79 Score=559.07 Aligned_cols=256 Identities=48% Similarity=0.807 Sum_probs=247.7
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+|++|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++++
T Consensus 29 ~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~ 108 (286)
T PRK14175 29 KGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQK 108 (286)
T ss_pred cCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~ 164 (272)
++++|+|+|||||+|+.|+|+|+.| .++|+||||.|++++|++|+++++||+|+|||+|+.||+|++++|.++||+|+
T Consensus 109 i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVt 186 (286)
T PRK14175 109 ILEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVT 186 (286)
T ss_pred HHhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEE
Confidence 9999999999999999999999976 56899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEecc
Q 024103 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITP 244 (272)
Q Consensus 165 v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tp 244 (272)
+|||+|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++.. +++++|||||+++.++++++||
T Consensus 187 v~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~~~---------~gkl~GDvd~~~~~~~a~~iTP 257 (286)
T PRK14175 187 ILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPDE---------NGKLKGDVDYDAVKEIAGAITP 257 (286)
T ss_pred EEeCCchhHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCcCC---------CCCeecCccHHHHHhhccCcCC
Confidence 9999999999999999999999999999999999999999999999853 2689999999999999999999
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 245 VPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 245 vpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
|||||||+|++|||+|+++++++..++
T Consensus 258 VPGGVGp~T~a~L~~n~~~a~~~~~~~ 284 (286)
T PRK14175 258 VPGGVGPLTITMVLNNTLLAEKMRRGI 284 (286)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999987765
No 30
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4e-79 Score=558.80 Aligned_cols=264 Identities=51% Similarity=0.817 Sum_probs=247.9
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+|+.
T Consensus 27 ~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~ 106 (295)
T PRK14174 27 KTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEF 106 (295)
T ss_pred ccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----C
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----H 159 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~----~ 159 (272)
+++++|+|+|||||+|+.|.|+|+.|+..++|+||||+|++++|++|+++++||+|+|||||..||||++++|++ +
T Consensus 107 ~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~ 186 (295)
T PRK14174 107 AVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKES 186 (295)
T ss_pred HHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccC
Confidence 999999999999999999999999774347899999999999999999999999999999999999999999998 7
Q ss_pred CCEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhc
Q 024103 160 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLA 239 (272)
Q Consensus 160 ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~ 239 (272)
+++|++||++|.++++++++|||||+|+|+|++++++|+|+|++|||+|+++.+ ++.+..+.|++|||||+++.+++
T Consensus 187 ~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~vk~GavVIDVgi~~~~---~~~~~~g~kl~GDVd~~~v~~~a 263 (295)
T PRK14174 187 NCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIE---DPSTKSGYRLVGDVDYEGVSAKA 263 (295)
T ss_pred CCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHcCCCCEEEEeeccccc---cccccCCCceECCcCHHHHHhhc
Confidence 899999999999999999999999999999999999999999999999999864 21111122899999999999999
Q ss_pred eEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 240 SVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 240 ~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
+++|||||||||+|++|||+|+++++++...
T Consensus 264 ~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~~ 294 (295)
T PRK14174 264 SAITPVPGGVGPMTIAMLLKNTLQSFERVNN 294 (295)
T ss_pred cEecCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987654
No 31
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.5e-78 Score=550.32 Aligned_cols=252 Identities=48% Similarity=0.756 Sum_probs=244.8
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+||++.|++||+|++||||+||+|||+|+++++
T Consensus 23 lg~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~ 102 (279)
T PRK14178 23 SGLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTER 102 (279)
T ss_pred hCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~ 164 (272)
++++|+|+|||||+|+.|.|+|+.| .++|+||||.|++++|++|+++++||+|+|+|+|..||||++++|.++|++|+
T Consensus 103 v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVt 180 (279)
T PRK14178 103 VIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVT 180 (279)
T ss_pred HHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeE
Confidence 9999999999999999999999976 57899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEecc
Q 024103 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITP 244 (272)
Q Consensus 165 v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tp 244 (272)
+||++|+++.+.+++|||||+|+|+|++++++|+++|++|||+|+++.+ +|++|||||+++.++++++||
T Consensus 181 v~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~~~----------gkl~GDvdf~~~~~~a~~iTP 250 (279)
T PRK14178 181 ICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVN----------GKLCGDVDFDAVKEIAGAITP 250 (279)
T ss_pred EEecChhHHHHHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccccC----------CCCcCCccHHHHHhhccCcCC
Confidence 9999999999999999999999999999999999999999999999854 589999999999999999999
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHH
Q 024103 245 VPGGVGPMTVAMLLSNTLDSAKRA 268 (272)
Q Consensus 245 vpGGvGp~T~amL~~n~v~a~~~~ 268 (272)
|||||||+|++|||+|+++++++.
T Consensus 251 VPGGVGp~T~a~L~~N~~~a~~~~ 274 (279)
T PRK14178 251 VPGGVGPMTIATLMENTFDAAKMR 274 (279)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998764
No 32
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6.6e-78 Score=551.32 Aligned_cols=256 Identities=48% Similarity=0.821 Sum_probs=246.8
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHH
Q 024103 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (272)
Q Consensus 5 ~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~ 84 (272)
.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|+++.+
T Consensus 30 ~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~ 109 (301)
T PRK14194 30 AGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEAR 109 (301)
T ss_pred CCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~ 164 (272)
++++|+|+|||||+|+.|+|+|+.| .++|+||||.|++++|++|+++++||+|+|||+|+.+|+|++.+|.++|++|+
T Consensus 110 i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVt 187 (301)
T PRK14194 110 VLQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVT 187 (301)
T ss_pred HHhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEE
Confidence 9999999999999999999999976 57899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCc--eEecccchhhhhhhceEe
Q 024103 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGY--RLMGDVCYEEAMRLASVI 242 (272)
Q Consensus 165 v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~--k~~Gdvd~~~~~~~~~~~ 242 (272)
+|||+++++++.+++|||||+++|.|++++++|+++|++|||+|+++.. + ++ +++|||||+++.++++++
T Consensus 188 v~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~~~---~-----~g~~kl~GDvdf~~~~~~a~~i 259 (301)
T PRK14194 188 VVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRID---D-----DGRSRLVGDVDFDSALPVVSAI 259 (301)
T ss_pred EECCCCCCHHHHHhcCCEEEEecCChhcccHhhccCCcEEEEecccccC---C-----CCCcceecccchHHHHhhccee
Confidence 9999999999999999999999999999999999999999999999853 1 13 899999999999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 243 TPVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 243 tpvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
|||||||||+|++|||+|+++++++|+.
T Consensus 260 TPVPGGVGp~Tva~L~~N~~~a~~~~~~ 287 (301)
T PRK14194 260 TPVPGGVGPMTIAFLMKNTVTAARLQAH 287 (301)
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999864
No 33
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7.8e-76 Score=538.10 Aligned_cols=261 Identities=49% Similarity=0.798 Sum_probs=245.7
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+||+|++|+||+|..|++.|.|+|+++||+++.++||++++|+|+++.|++||+|++||||+||+|||+|++++
T Consensus 28 ~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~ 107 (296)
T PRK14188 28 AHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSE 107 (296)
T ss_pred ccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|+|+++.| .++|+||||+|++++|++|+++++||+|+|||||+.+|+|++.+|+++|++|
T Consensus 108 ~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tV 185 (296)
T PRK14188 108 AVIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATV 185 (296)
T ss_pred HHHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEE
Confidence 99999999999999999999999976 5789999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCC-ceEecccchhhhhhhceEe
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVI 242 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~-~k~~Gdvd~~~~~~~~~~~ 242 (272)
++||++|+++++.+++|||||+++|.|++++++|+++|++|||+|+++.+ ++....+ .+++|||||+++.++++++
T Consensus 186 tv~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~~~---~~~~~~g~~~l~GDvd~~~v~~~a~~i 262 (296)
T PRK14188 186 TIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINRIP---APEKGEGKTRLVGDVAFAEAAEVAGAI 262 (296)
T ss_pred EEECCCCCCHHHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcccC---CccccCCCceeeCCCCHHHHHhhccEe
Confidence 99998888999999999999999999999999999999999999999853 1110001 2799999999999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 243 TPVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 243 tpvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
|||||||||+|++|||+|+++++++..
T Consensus 263 TPVPGGVGp~T~a~L~~N~~~a~~~~~ 289 (296)
T PRK14188 263 TPVPGGVGPMTIACLLANTLTAACRAA 289 (296)
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998754
No 34
>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=3.5e-75 Score=556.76 Aligned_cols=263 Identities=52% Similarity=0.849 Sum_probs=255.9
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
.-+++|.|+|||||+.++|..|+|+|.|+++++||++.++.||+++++-||+.+|.+||+|+.||||+||+|||.|+|++
T Consensus 30 ~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~ell~~I~~lNeD~tvHGiiVQLPLp~hide~ 109 (935)
T KOG4230|consen 30 HPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGELLREIKALNEDPTVHGIIVQLPLPAHIDED 109 (935)
T ss_pred CCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHHHHHHHhccCCCccceEEEeccCccccchh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
.+.++|+|+||||||+.+|.|+|..++.++.|+||||.||+++|+++++.+.||++||+|||.+||.|++.+|...++||
T Consensus 110 ~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v~Gk~aVVlGRS~IVG~Pia~LL~~~NaTV 189 (935)
T KOG4230|consen 110 TVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFVAGKNAVVLGRSKIVGSPIAALLLWANATV 189 (935)
T ss_pred hHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCccccceeEEEecccccCChHHHHHHhcCceE
Confidence 99999999999999999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
|+||++|+++.+.+.+|||||.|+|.|+|++.||+|||++|||+|+|+.. |+++.++.|++|||||+++.+.+++||
T Consensus 190 TiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWiKpGavVIDvGINyvp---D~~Kksg~klvGDVdfe~Akevas~IT 266 (935)
T KOG4230|consen 190 TICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWIKPGAVVIDVGINYVP---DPSKKSGFKLVGDVDFESAKEVASFIT 266 (935)
T ss_pred EEecCCCccHHHHhccCCEEEEEcCCcceeecccccCCcEEEEccccccC---CCCCcccceEeeecchHhhhhhhhccc
Confidence 99999999999999999999999999999999999999999999999987 677666779999999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
||||||||||+||||+|++++++|+.
T Consensus 267 PVPGGVGPMTVAMLmqNtveaAKR~r 292 (935)
T KOG4230|consen 267 PVPGGVGPMTVAMLMQNTVEAAKRQR 292 (935)
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999875
No 35
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2e-73 Score=520.78 Aligned_cols=255 Identities=42% Similarity=0.708 Sum_probs=245.5
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHH
Q 024103 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (272)
Q Consensus 4 ~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~ 83 (272)
+.|++|+|++|++|+||+|..|++.|+++|+++||+++|+.||+++++++|.+.|++||+|+++|||+||+|||++++++
T Consensus 29 ~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d~~v~Gi~VqlPlp~~i~~~ 108 (283)
T PRK14192 29 KTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDER 108 (283)
T ss_pred ccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCccccCHH
Confidence 44889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024103 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (272)
Q Consensus 84 ~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V 163 (272)
+++++|+|+|||||+|+.|.|+++.+ .+.|.|||+.|++++|++|+++++||+|+|+|+|+.||||++++|+++||+|
T Consensus 109 ~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatV 186 (283)
T PRK14192 109 ACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATV 186 (283)
T ss_pred HHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999876 5779999999999999999999999999999999988999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEec
Q 024103 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVIT 243 (272)
Q Consensus 164 ~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~t 243 (272)
++|||+++++.+.+++|||||+|||+|++++.+|+++|++|+|+|++|.+ ++++|||||+++.++++++|
T Consensus 187 tv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~lk~gavViDvg~n~~~----------~~~~GDvd~~~~~~~a~~it 256 (283)
T PRK14192 187 TICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRD----------GGGVGDIELQGIEEIASAYT 256 (283)
T ss_pred EEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHcCCCCEEEEEEEeecC----------CCCcccccHHHhhccceEeC
Confidence 99999999999999999999999999999999999999999999999965 35899999999999999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 244 PVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 244 pvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
||||||||+|++|||+|+++++++.+|
T Consensus 257 PvPGGVGp~T~a~L~~n~~~~~~~~~~ 283 (283)
T PRK14192 257 PVPGGVGPMTINTLIRQTVEAAEKALG 283 (283)
T ss_pred CCCCcChHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999998775
No 36
>KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism]
Probab=100.00 E-value=5.9e-71 Score=489.31 Aligned_cols=267 Identities=60% Similarity=0.933 Sum_probs=253.5
Q ss_pred CCCCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCC
Q 024103 1 MKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHL 80 (272)
Q Consensus 1 ~~~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~ 80 (272)
|++..|..|+|+.++||++|+|..|+..++++|+++||.+..+.||++.++++++..|.++|+|++||||+||+|+|.|+
T Consensus 31 ~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~~i~~~N~d~sV~GilV~~pv~~h~ 110 (309)
T KOG0089|consen 31 MKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELESAIAEANNDPSVHGILVQLPVPQHI 110 (309)
T ss_pred HHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHHHHHHhcCCCceeeEEEEeeccccc
Confidence 56677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC-
Q 024103 81 DEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH- 159 (272)
Q Consensus 81 ~~~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~- 159 (272)
+++.++++++|+|||||+|+.|.|+|...+..+.|+||||.|++++|+++++.+.||+++|+|||.+||+|+|++|+..
T Consensus 111 ~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~GKn~VVigRS~iVg~P~A~LL~~dG 190 (309)
T KOG0089|consen 111 QEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYGKNAVVIGRSKIVGMPLALLLHNDG 190 (309)
T ss_pred cHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecCceEEEEcccccccchHHHHHhhcC
Confidence 9999999999999999999999999988766778999999999999999999999999999999999999999999999
Q ss_pred -------CCEEEEEeCCCC--CHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEeccc
Q 024103 160 -------HATVSIVHALTK--NPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDV 230 (272)
Q Consensus 160 -------ga~V~v~~~~t~--~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdv 230 (272)
.++|+++||.|+ +++.++++|||+|+|+|.|++++.+|+++|+.++|+|+|+.+ |+.+....+|+||+
T Consensus 191 ~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~Ik~Ga~vidvgin~v~---dp~~a~~~klvgdv 267 (309)
T KOG0089|consen 191 AHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMIKPGAAVIDVGINRVH---DPSTAVGIKLVGDV 267 (309)
T ss_pred CcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCcccccceeecCceeEecCCCccc---ccccceeeEEeeec
Confidence 578999999985 468999999999999999999999999999999999999998 67654357899999
Q ss_pred chhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 024103 231 CYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 231 d~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~ 270 (272)
||+++..+++++||||||+||+|++|||+|+++++++.+.
T Consensus 268 dFe~~~~kag~itpVPggvGpmTiAMLl~Ntl~~ak~v~~ 307 (309)
T KOG0089|consen 268 DFEEASKKAGAITPVPGGVGPMTIAMLLRNTLRAAKRVFL 307 (309)
T ss_pred cHHHhhhhcCccccCCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999997654
No 37
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=100.00 E-value=3.2e-51 Score=345.32 Aligned_cols=160 Identities=54% Similarity=0.864 Sum_probs=138.8
Q ss_pred ccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcC
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITS 178 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l~~~l~ 178 (272)
||+|.|+|+.+ ++.|+||||+|++++|++|+++++||+|+|||+|..||+|++++|.++||+|++||++|++++++++
T Consensus 1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~ 78 (160)
T PF02882_consen 1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR 78 (160)
T ss_dssp SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence 78999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHH
Q 024103 179 EADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLL 258 (272)
Q Consensus 179 ~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~ 258 (272)
+|||||+|+|+|++++++|+|+|++|||+|+++.. .+++++|||||+++.++++++|||||||||+|++|||
T Consensus 79 ~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~~~--------~~~~~~GDv~~~~~~~~a~~itPvPgGVGplT~a~L~ 150 (160)
T PF02882_consen 79 RADIVVSAVGKPNLIKADWIKPGAVVIDVGINYVP--------GDGKLVGDVDFESVKEKASAITPVPGGVGPLTVAMLM 150 (160)
T ss_dssp TSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEEET--------TTTEEEESB-HHHHHTTCSEEE-SSSSCHHHHHHHHH
T ss_pred eccEEeeeeccccccccccccCCcEEEecCCcccc--------ccceeeecccHHHhhccceEEeeCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999972 1379999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 024103 259 SNTLDSAKRA 268 (272)
Q Consensus 259 ~n~v~a~~~~ 268 (272)
+|++++++++
T Consensus 151 ~N~v~a~~~~ 160 (160)
T PF02882_consen 151 KNLVKAAKRQ 160 (160)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 38
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=100.00 E-value=5.4e-45 Score=314.18 Aligned_cols=158 Identities=31% Similarity=0.441 Sum_probs=143.1
Q ss_pred cccccCccccccccccccCCC-------CCccccCCHHHHHHHHHHhCC---------CCccceEEEEcCCcccHHHHHH
Q 024103 91 LEKDVDGFHPLNIGNLAMRGR-------EPLFIPCTPKGCIELLIRSGV---------EIMGKNAVVIGRSNIVGLPTSL 154 (272)
Q Consensus 91 p~KDvdg~~~~n~g~l~~~~~-------~~~~~p~Ta~g~~~~l~~~~~---------~l~gk~v~ViG~g~~vG~~la~ 154 (272)
|+|||||+|+.|.|+|+.+.. +++|+||||+|++++|++|++ +++||+|+|||||.+||+|+++
T Consensus 1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~ 80 (197)
T cd01079 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA 80 (197)
T ss_pred CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence 689999999999999986631 157999999999999999977 8999999999999999999999
Q ss_pred HHHhCCCEEEEE---------------eCCC--CC----HhhhcCCCcEEEEecCCCcc-ccCCCcCCCcEEEEeeeCCC
Q 024103 155 LLQRHHATVSIV---------------HALT--KN----PEQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 155 ~L~~~ga~V~v~---------------~~~t--~~----l~~~l~~ADIVIsa~g~p~~-i~~~~vk~g~vviDig~~~~ 212 (272)
+|+++||+|++| |++| ++ +.+.+++|||||+|+|+|++ +++||+|+|++|||+|++.
T Consensus 81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~- 159 (197)
T cd01079 81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIK- 159 (197)
T ss_pred HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc-
Confidence 999999999999 5665 35 78999999999999999999 9999999999999999863
Q ss_pred CCCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 024103 213 DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 213 ~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
|+| +++.++++++||| |||+|++|||+|++++++++.
T Consensus 160 ----------------dvd-~~v~~~as~iTPv---VGpvTva~L~~Nlv~~~~~~~ 196 (197)
T cd01079 160 ----------------NFE-PSVKEKASIYVPS---IGKVTIAMLLRNLLRLYHNQH 196 (197)
T ss_pred ----------------Ccc-HhHHhhcCEeCCC---cCHHHHHHHHHHHHHHHHHhc
Confidence 344 6678899999998 999999999999999998764
No 39
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=100.00 E-value=4.3e-41 Score=286.32 Aligned_cols=168 Identities=58% Similarity=0.918 Sum_probs=157.1
Q ss_pred cccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 91 LEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 91 p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
|+|||||++..|.|+++.+ ...|+|||+.+++++++++..+++||+|+|||+|+++|++++.+|.++|++|++++|++
T Consensus 1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 6899999999999999865 57899999999999999999999999999999999889999999999999999999999
Q ss_pred CCHhhhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCCccc
Q 024103 171 KNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVG 250 (272)
Q Consensus 171 ~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvG 250 (272)
+++.+.+++||+||+|||+|+++++++++++.++||++.+|+. |.+ ++|++||+|++.+.+++.++||+|||||
T Consensus 79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~prdv---d~~---~~~~~G~~d~~~~~~~~~~~~~~pggvg 152 (168)
T cd01080 79 KNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINRVP---DKS---GGKLVGDVDFESAKEKASAITPVPGGVG 152 (168)
T ss_pred hhHHHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCCcc---ccc---CCCeeCCcCHHHHHhhccCcCCCCCcCh
Confidence 9999999999999999999999999999999999999999975 321 3689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 024103 251 PMTVAMLLSNTLDSAK 266 (272)
Q Consensus 251 p~T~amL~~n~v~a~~ 266 (272)
|+|+++||+|++++++
T Consensus 153 p~t~a~l~~n~~~~~~ 168 (168)
T cd01080 153 PMTVAMLMKNTVEAAK 168 (168)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998763
No 40
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=100.00 E-value=1.2e-39 Score=269.56 Aligned_cols=137 Identities=36% Similarity=0.555 Sum_probs=128.9
Q ss_pred CCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcCCCcEEEEecCCC
Q 024103 111 REPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 111 ~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p 190 (272)
.++.|+||||+|++++|++|+++++||+|+|+|||..+|+|++.+|.++|++|++||++|+++++++++|||||+|+|+|
T Consensus 3 ~~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~ 82 (140)
T cd05212 3 CTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKP 82 (140)
T ss_pred CCCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 191 NLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 191 ~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
++++++|+|+|++|+|+|+++.. |+++.++++++|||||||||+|++|||+|+++++
T Consensus 83 ~~i~~~~ikpGa~Vidvg~~~~~------------------~~~~~~~a~~~tPvpgGVGp~T~a~L~~n~~~~~ 139 (140)
T cd05212 83 EKVPTEWIKPGATVINCSPTKLS------------------GDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSV 139 (140)
T ss_pred CccCHHHcCCCCEEEEcCCCccc------------------chhhHhhceEEcCCCCCchHHHHHHHHHHHHHhc
Confidence 99999999999999999987621 3566788999999999999999999999999875
No 41
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=99.95 E-value=1.3e-27 Score=217.93 Aligned_cols=230 Identities=17% Similarity=0.191 Sum_probs=182.0
Q ss_pred CCCCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCC
Q 024103 1 MKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHL 80 (272)
Q Consensus 1 ~~~~~~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~ 80 (272)
|....+..++|..=++| +|-|++-. .|+.+|+++|+++.|..|+ .++|.+.++.++. .++.|++||+|||+
T Consensus 1 ~~~~~~~~~~~~~gliG-~P~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~-~~~~G~nVT~P~K~-- 71 (272)
T PRK12550 1 MTNMINKDTQLCISLAA-RPSNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRA-LGIRGCAVSMPFKE-- 71 (272)
T ss_pred CCCcCCCCceEEEEEEc-cchhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHh-cCCCEEEECcCCHH--
Confidence 44555667787666778 44677766 9999999999999999995 3678889998877 47999999999998
Q ss_pred CHHHHHhcCCc-ccccCccc-ccc-ccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHH
Q 024103 81 DEGKILDAVSL-EKDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 157 (272)
Q Consensus 81 ~~~~i~~~i~p-~KDvdg~~-~~n-~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~ 157 (272)
...++++.++| .+.+.+++ .++ .|++. |+|+|+ .|+++.|++.+.+ .+|+++|+|+||+ +|+++..|.
T Consensus 72 ~~~~~lD~l~~~A~~iGAVNTi~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~ 142 (272)
T PRK12550 72 AVIPLVDELDPSAQAIESVNTIVNTDGHLK-AYNTDY------IAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALR 142 (272)
T ss_pred HHHHHhhcCCHHHHHhCCeeEEEeeCCEEE-EEecCH------HHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHH
Confidence 66888999999 88888773 334 34444 555554 9999999988775 4689999999998 999999999
Q ss_pred hCCC-EEEEEeCCCCC---Hh--------hhc--CCCcEEEEecC---CCc------cccCCCcCCCcEEEEeeeCCCCC
Q 024103 158 RHHA-TVSIVHALTKN---PE--------QIT--SEADIVIAAAG---VAN------LVRGSWLKPGAVVLDVGTCPVDV 214 (272)
Q Consensus 158 ~~ga-~V~v~~~~t~~---l~--------~~l--~~ADIVIsa~g---~p~------~i~~~~vk~g~vviDig~~~~~~ 214 (272)
++|+ +|+|++|+.+. +. +.+ ..+|+||+||+ .++ .++.++++++.+|+|+.|+|.+
T Consensus 143 ~~g~~~i~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~- 221 (272)
T PRK12550 143 DAGFTDGTIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAE- 221 (272)
T ss_pred HCCCCEEEEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCcc-
Confidence 9997 69999997521 11 112 45899999986 221 2667788999999999999976
Q ss_pred CCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 215 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 215 ~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
|+|+ +. +++.++ ++-+|.+ ||++|++++++.|+|.
T Consensus 222 ---------T~ll-----~~-A~~~G~--~~i~Gl~-----MLi~Qa~~~f~lwtg~ 256 (272)
T PRK12550 222 ---------TPLI-----RY-ARARGK--TVITGAE-----VIALQAVEQFVLYTGV 256 (272)
T ss_pred ---------CHHH-----HH-HHHCcC--eEeCCHH-----HHHHHHHHHHHHHhCC
Confidence 6777 55 667787 5667887 9999999999999985
No 42
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=99.95 E-value=1.7e-27 Score=218.42 Aligned_cols=225 Identities=16% Similarity=0.159 Sum_probs=179.3
Q ss_pred EEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcC
Q 024103 13 VILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG---CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAV 89 (272)
Q Consensus 13 ii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~---~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i 89 (272)
.-.+|+.-+...-=..|+.+|+++|+++.|..|+.. +++++|.+.++.+.. .++.|++||+|||+ ...++++.+
T Consensus 8 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~~D~~ 84 (284)
T PRK12549 8 AGLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAER-MGFAGLNITHPCKQ--AVIPHLDEL 84 (284)
T ss_pred EEEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHh-cCCCEEEECcCCHH--HHHHHhccC
Confidence 345675433334456899999999999999999753 347889999999976 48999999999998 667888899
Q ss_pred Cc-ccccCccc-ccc-ccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEE
Q 024103 90 SL-EKDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSI 165 (272)
Q Consensus 90 ~p-~KDvdg~~-~~n-~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v 165 (272)
++ .+.+.+++ .++ .|++. |+|+|+ .|+++.|+....++++|+|+|+|+|++ |++++..|...|+ +|++
T Consensus 85 ~~~A~~iGAvNTv~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~I~I 156 (284)
T PRK12549 85 SDDARALGAVNTVVFRDGRRI-GHNTDW------SGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVERLTI 156 (284)
T ss_pred CHHHHHhCCceEEEecCCEEE-EEcCCH------HHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEE
Confidence 98 88888873 444 34554 655555 999999998777899999999999997 9999999999997 8999
Q ss_pred EeCCCC----------------------CHhhhcCCCcEEEEecCC---C--c-cccCCCcCCCcEEEEeeeCCCCCCCC
Q 024103 166 VHALTK----------------------NPEQITSEADIVIAAAGV---A--N-LVRGSWLKPGAVVLDVGTCPVDVSVD 217 (272)
Q Consensus 166 ~~~~t~----------------------~l~~~l~~ADIVIsa~g~---p--~-~i~~~~vk~g~vviDig~~~~~~~~~ 217 (272)
++|+.. ++.+.++++|+||++|+. + . .++.++++++.+|+|+.|+|.+
T Consensus 157 ~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~---- 232 (284)
T PRK12549 157 FDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLE---- 232 (284)
T ss_pred ECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCC----
Confidence 998731 223356789999999752 2 2 2667789999999999999976
Q ss_pred CCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 218 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 218 ~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
|+|+ +. +++.++ ++-+|.+ ||++|++.+++.|+|.
T Consensus 233 ------T~ll-----~~-A~~~G~--~~~~G~~-----ML~~Qa~~~f~~wtg~ 267 (284)
T PRK12549 233 ------TELL-----RA-ARALGC--RTLDGGG-----MAVFQAVDAFELFTGR 267 (284)
T ss_pred ------CHHH-----HH-HHHCCC--eEecCHH-----HHHHHHHHHHHHhcCC
Confidence 6777 55 677787 5667777 9999999999999985
No 43
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=99.95 E-value=4.2e-27 Score=216.11 Aligned_cols=221 Identities=21% Similarity=0.200 Sum_probs=174.9
Q ss_pred EeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc-cc
Q 024103 15 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (272)
Q Consensus 15 ~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p-~K 93 (272)
++|+--+...-=..|+.+|+++|+++.|..|+. ++++|.+.++.++.. ++.|++||+|||. ...++++.+++ .+
T Consensus 12 liG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~l~~~-~~~G~nVTiP~K~--~~~~~~D~l~~~A~ 86 (288)
T PRK12749 12 LMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEV--DNDSFPGAIEGLKAL-KMRGTGVSMPNKQ--LACEYVDELTPAAK 86 (288)
T ss_pred EECCCcccccCHHHHHHHHHHcCCCeEEEEEec--CHHHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHHhccCCHHHH
Confidence 456432222334589999999999999999955 778999999999864 7999999999998 66888899998 88
Q ss_pred ccCccc-ccc-ccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC
Q 024103 94 DVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 170 (272)
Q Consensus 94 Dvdg~~-~~n-~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t 170 (272)
.+.+++ .++ .|++. |+|+|+ .|+++.|++.+.+++||+++|+|+||+ +|+++..|..+|+ +|+|++|+.
T Consensus 87 ~iGAVNTv~~~~g~l~-G~NTD~------~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 87 LVGAINTIVNDDGYLR-GYNTDG------TGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred HhCceeEEEccCCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCc
Confidence 888874 333 45554 655555 999999999999999999999999998 9999999999996 899999973
Q ss_pred C------CH-----------------------hhhcCCCcEEEEecCC---Cc----c-ccCCCcCCCcEEEEeeeCCCC
Q 024103 171 K------NP-----------------------EQITSEADIVIAAAGV---AN----L-VRGSWLKPGAVVLDVGTCPVD 213 (272)
Q Consensus 171 ~------~l-----------------------~~~l~~ADIVIsa~g~---p~----~-i~~~~vk~g~vviDig~~~~~ 213 (272)
. ++ .+.++++|+||++|+. |+ + ++.+.++++.+|+|+.|+|.+
T Consensus 159 ~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~ 238 (288)
T PRK12749 159 EFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM 238 (288)
T ss_pred cHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCcc
Confidence 1 00 1134578999998863 32 1 234567889999999999976
Q ss_pred CCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 214 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 214 ~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
|+|+ +. +++.++ ++-+|.+ ||++|+++++|.|+|.
T Consensus 239 ----------T~ll-----~~-A~~~G~--~~~~Gl~-----ML~~Qa~~~f~lwtg~ 273 (288)
T PRK12749 239 ----------TKLL-----QQ-AQQAGC--KTIDGYG-----MLLWQGAEQFTLWTGK 273 (288)
T ss_pred ----------CHHH-----HH-HHHCCC--eEECCHH-----HHHHHHHHHHHHhcCC
Confidence 6787 65 667787 5566777 9999999999999985
No 44
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=99.95 E-value=1.5e-27 Score=191.90 Aligned_cols=91 Identities=51% Similarity=0.820 Sum_probs=80.3
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHH
Q 024103 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (272)
Q Consensus 6 ~~~p~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i 85 (272)
|++|+||+|++|+||+|..|++++.+.|+++||+++.+.||++++++++++.|++||+|++||||+||+|||+|+++.++
T Consensus 27 ~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~D~~V~GIlvq~PLP~~i~~~~i 106 (117)
T PF00763_consen 27 GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELIEKLNEDPSVHGILVQLPLPKHIDERKI 106 (117)
T ss_dssp T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHHHHHHH-TT-SEEEEESSSSTTSHHHHH
T ss_pred CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCccHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccC
Q 024103 86 LDAVSLEKDVD 96 (272)
Q Consensus 86 ~~~i~p~KDvd 96 (272)
+++|+|.||||
T Consensus 107 ~~~I~p~KDVD 117 (117)
T PF00763_consen 107 LEAIDPEKDVD 117 (117)
T ss_dssp HHTS-GGGBTT
T ss_pred HhccCcccCCC
Confidence 99999999997
No 45
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=99.95 E-value=5.8e-27 Score=214.15 Aligned_cols=210 Identities=22% Similarity=0.319 Sum_probs=173.3
Q ss_pred HHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc-ccccCcc-ccccc
Q 024103 26 VRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGF-HPLNI 103 (272)
Q Consensus 26 ~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p-~KDvdg~-~~~n~ 103 (272)
=..|+.+++++|+++.|..|.. ..++|...++.+.+ .++.|+||++|+|+ ...++++.+++ ++-+.++ |.++.
T Consensus 22 P~~Hn~~~~~lGl~~~Y~a~~v--~~~~l~~~v~~~~~-~g~~G~NVTiP~Ke--~~~~~lD~l~~~A~~iGAVNTl~~~ 96 (283)
T COG0169 22 PRMHNAAFRALGLDYVYLAFEV--PPEDLPEAVSGIRA-LGFRGLNVTIPFKE--AALPLLDELSPRARLIGAVNTLVRE 96 (283)
T ss_pred HHHHHHHHHHcCCCceEEEeec--CHHHHHHHHHHHHh-cCCCeeEECCccHH--HHHHHHhcCCHHHHHhCCceEEEEc
Confidence 3489999999999999999966 68999999999994 79999999999998 66889999999 8888887 55564
Q ss_pred --cccccCCCCCccccCCHHHHHHHHHHhC--CCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCCC---H--
Q 024103 104 --GNLAMRGREPLFIPCTPKGCIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTKN---P-- 173 (272)
Q Consensus 104 --g~l~~~~~~~~~~p~Ta~g~~~~l~~~~--~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t~~---l-- 173 (272)
|++. |+|+|+ .|+.+.|++++ .+.+|++|+|+|+||+ +|+++..|++.|+ +++|+||+.+. |
T Consensus 97 ~~g~l~-G~NTD~------~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 97 DDGKLR-GYNTDG------IGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCEEE-EEcCCH------HHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 5665 776666 99999999987 5667999999999998 9999999999995 89999997421 1
Q ss_pred --------------h--hhcCCCcEEEEecCC---Cc----cccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEeccc
Q 024103 174 --------------E--QITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDV 230 (272)
Q Consensus 174 --------------~--~~l~~ADIVIsa~g~---p~----~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdv 230 (272)
. +...++|+||++|+. ++ +++.+.++++.+++|+.|+|.+ |+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~----------TplL--- 235 (283)
T COG0169 169 LFGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLE----------TPLL--- 235 (283)
T ss_pred HhhhcccccccccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCC----------CHHH---
Confidence 1 111258999999972 32 3556788999999999999986 6788
Q ss_pred chhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 231 CYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 231 d~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
+. +++.++. +-.|.| ||++|.+++|+.|+|.
T Consensus 236 --~~-A~~~G~~--~idGl~-----Mlv~Qaa~aF~lwtg~ 266 (283)
T COG0169 236 --RE-ARAQGAK--TIDGLG-----MLVHQAAEAFELWTGV 266 (283)
T ss_pred --HH-HHHcCCe--EECcHH-----HHHHHHHHHHHHHhCC
Confidence 65 6666664 556777 9999999999999986
No 46
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.95 E-value=1.4e-26 Score=212.74 Aligned_cols=222 Identities=21% Similarity=0.252 Sum_probs=177.1
Q ss_pred EEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc-c
Q 024103 14 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (272)
Q Consensus 14 i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p-~ 92 (272)
-++|+.-+...-=..|+.+|+++|+++.|..|+. ++++|.+.++.++. .++.|++||+|||. ...++++.++| .
T Consensus 13 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~v~~~ld~~~~~A 87 (289)
T PRK12548 13 GLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFDI--PVDKVPDAIKAIKT-FNMRGANVTMPCKS--EAAKYMDELSPAA 87 (289)
T ss_pred EEEcCCcccccCHHHHHHHHHHcCCCEEEEEEec--CHHHHHHHHHHHHH-CCCCEEEECccCHH--HHHHHhhcCCHHH
Confidence 3567543333334589999999999999999965 67889999999986 48999999999998 66888999998 8
Q ss_pred cccCccc-ccc-ccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCC
Q 024103 93 KDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL 169 (272)
Q Consensus 93 KDvdg~~-~~n-~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~-V~v~~~~ 169 (272)
+.+.+++ .++ .|++. |+|+|+ .|+++.|++.+.+++||+++|+|+||+ |++++..|+..|++ |++++|+
T Consensus 88 ~~iGavNTi~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 88 RIIGAVNTIVNDDGKLT-GHITDG------LGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred HHhCceeEEEeECCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 8887773 334 35554 665555 999999998888899999999999997 99999999999985 9999987
Q ss_pred C---CC---------------------------HhhhcCCCcEEEEecC---CCc----cc-cCCCcCCCcEEEEeeeCC
Q 024103 170 T---KN---------------------------PEQITSEADIVIAAAG---VAN----LV-RGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 170 t---~~---------------------------l~~~l~~ADIVIsa~g---~p~----~i-~~~~vk~g~vviDig~~~ 211 (272)
. +. +.+.++.+|+||++|+ .|+ .+ +.+++.++.+|+|+.|+|
T Consensus 160 ~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P 239 (289)
T PRK12548 160 DDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNP 239 (289)
T ss_pred chHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCC
Confidence 3 10 1123456899998886 232 24 456788899999999999
Q ss_pred CCCCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 212 VDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 212 ~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
.+ |+|+ +. +++.++ ++-+|.+ ||++|+++++++|+|.
T Consensus 240 ~~----------T~ll-----~~-A~~~G~--~~~~G~~-----ML~~Qa~~~f~lwtg~ 276 (289)
T PRK12548 240 KK----------TKLL-----ED-AEAAGC--KTVGGLG-----MLLWQGAEAYKLYTGK 276 (289)
T ss_pred CC----------CHHH-----HH-HHHCCC--eeeCcHH-----HHHHHHHHHHHHhcCC
Confidence 76 6777 55 677787 6777888 9999999999999985
No 47
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=99.94 E-value=9.2e-27 Score=212.61 Aligned_cols=220 Identities=17% Similarity=0.249 Sum_probs=175.7
Q ss_pred EeCCCcchH-HHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc-c
Q 024103 15 LVGERRDSQ-TYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (272)
Q Consensus 15 ~vg~~~~s~-~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p-~ 92 (272)
.+| +|-++ .-=..|+.+|+++|+++.|..|+. ++++|.+.++.+... ++.|++||+|||. +..++++.++| .
T Consensus 10 viG-~pi~hS~SP~~hn~~~~~~gl~~~y~~~~v--~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~~d~~~~~A 83 (278)
T PRK00258 10 VIG-NPIAHSKSPLIHNAAFKQLGLDGVYLAILV--PPEDLEDAVKGFFAL-GGRGANVTVPFKE--AAFALADELSERA 83 (278)
T ss_pred EEC-CchhcccCHHHHHHHHHHcCCCcEEEEEec--CHHHHHHHHHHHHhC-CCCEEEECcCCHH--HHHHHhhcCCHHH
Confidence 456 34322 334478999999999999999954 778899999999875 7999999999998 66888999999 8
Q ss_pred cccCccc-ccc-ccccccCCCCCccccCCHHHHHHHHHH-hCCCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeC
Q 024103 93 KDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHA 168 (272)
Q Consensus 93 KDvdg~~-~~n-~g~l~~~~~~~~~~p~Ta~g~~~~l~~-~~~~l~gk~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~ 168 (272)
+.+.+++ .++ .|++. |+|+| ..|+++.|++ .+.++++|+|+|+|+|++ |++++..|..+| ++|++++|
T Consensus 84 ~~igavNtv~~~~g~l~-G~NTD------~~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R 155 (278)
T PRK00258 84 RLIGAVNTLVLEDGRLI-GDNTD------GIGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNR 155 (278)
T ss_pred HHhCCceEEEeeCCEEE-EEccc------HHHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeC
Confidence 8888774 334 34443 55444 5999999986 577899999999999996 999999999999 69999999
Q ss_pred CCCC-------------------HhhhcCCCcEEEEecCCCc-------cccCCCcCCCcEEEEeeeCCCCCCCCCCCCC
Q 024103 169 LTKN-------------------PEQITSEADIVIAAAGVAN-------LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEY 222 (272)
Q Consensus 169 ~t~~-------------------l~~~l~~ADIVIsa~g~p~-------~i~~~~vk~g~vviDig~~~~~~~~~~~~~~ 222 (272)
+.+. +.+.+.++|+||++|+... .+..++++++.+|+|+.|+|.+
T Consensus 156 ~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~--------- 226 (278)
T PRK00258 156 TVERAEELAKLFGALGKAELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLP--------- 226 (278)
T ss_pred CHHHHHHHHHHhhhccceeecccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCC---------
Confidence 7421 1234578999999997421 2455778999999999999865
Q ss_pred CceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 223 GYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 223 ~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
|.|+ +. +++.++ ++-+|.+ ||++|++.+++.|+|.
T Consensus 227 -T~ll-----~~-A~~~G~--~~~~G~~-----Ml~~Qa~~~f~~wtg~ 261 (278)
T PRK00258 227 -TPFL-----AW-AKAQGA--RTIDGLG-----MLVHQAAEAFELWTGV 261 (278)
T ss_pred -CHHH-----HH-HHHCcC--eecCCHH-----HHHHHHHHHHHHHcCC
Confidence 6676 55 677787 6777887 9999999999999985
No 48
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=99.94 E-value=2.6e-26 Score=210.27 Aligned_cols=226 Identities=16% Similarity=0.181 Sum_probs=174.1
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcC
Q 024103 10 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAV 89 (272)
Q Consensus 10 ~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i 89 (272)
+--.-.+|+.-+...-=..|+.+|+++|+++.|+.|+.. +.++|.+.++.+.. ++.|++||+|||. ...++++.+
T Consensus 5 ~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~-~~~~l~~~~~~~~~--~~~G~nVT~P~K~--~~~~~~d~~ 79 (282)
T TIGR01809 5 PKKAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETC-SAEELKEVLSGFGP--QFGGASVTIPLKF--AILRFADEH 79 (282)
T ss_pred CeEEEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeecC-CHHHHHHHHHhcCC--CCcEEEECCCCHH--HHHHHhhcC
Confidence 333456775433333345899999999999999999642 35789999998843 7999999999998 668888999
Q ss_pred Cc-ccccCccc-ccc--ccccccCCCCCccccCCHHHHHHHHHHhCC--CCccceEEEEcCCcccHHHHHHHHHhCCC-E
Q 024103 90 SL-EKDVDGFH-PLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGV--EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-T 162 (272)
Q Consensus 90 ~p-~KDvdg~~-~~n--~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~--~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~ 162 (272)
++ .|.+.+++ .++ .|++. |+|+|+ .|+++.|++.+. +++||+|+|||+|++ ||+++..|...|+ +
T Consensus 80 ~~~A~~iGAVNTv~~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~ 151 (282)
T TIGR01809 80 TDRASLIGSVNTLLRTQNGIWK-GDNTDW------DGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTD 151 (282)
T ss_pred CHHHHHhCceeEEEEcCCCcEE-EecCCH------HHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCe
Confidence 98 88888773 333 24454 655555 999999998774 689999999999998 9999999999996 7
Q ss_pred EEEEeCCCC----------------------CHhhhcCCCcEEEEecCCCccccCCC------------cCCCcEEEEee
Q 024103 163 VSIVHALTK----------------------NPEQITSEADIVIAAAGVANLVRGSW------------LKPGAVVLDVG 208 (272)
Q Consensus 163 V~v~~~~t~----------------------~l~~~l~~ADIVIsa~g~p~~i~~~~------------vk~g~vviDig 208 (272)
|+|++|+.. ++.+.+.++|+||++|+....++.+. ++++.+++|+.
T Consensus 152 i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~v 231 (282)
T TIGR01809 152 ITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAA 231 (282)
T ss_pred EEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEe
Confidence 999998731 11234577899999998644333322 24578999999
Q ss_pred eCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 209 TCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 209 ~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
|+|.+ |.|+ +. ++++++ ++-+|.+ ||++|.+.+|+.|+|.
T Consensus 232 Y~P~~----------T~ll-----~~-A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 271 (282)
T TIGR01809 232 YDPWP----------TPLV-----AI-VSAAGW--RVISGLQ-----MLLHQGFAQFEQWTGM 271 (282)
T ss_pred eCCCC----------CHHH-----HH-HHHCCC--EEECcHH-----HHHHHHHHHHHHHHCC
Confidence 99976 6677 55 666776 5667777 9999999999999985
No 49
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=99.94 E-value=1.2e-26 Score=212.72 Aligned_cols=224 Identities=17% Similarity=0.175 Sum_probs=176.5
Q ss_pred EeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc
Q 024103 15 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG---CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL 91 (272)
Q Consensus 15 ~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~---~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p 91 (272)
++|+.-+...-=..|+.+|+++|+++.|..|+.. .++++|.+.++.+... ++.|++||+|||. ...++++.+++
T Consensus 9 liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~lD~l~~ 85 (283)
T PRK14027 9 LIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYL-GFNGLNITHPYKQ--AVLPLLDEVSE 85 (283)
T ss_pred EECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhc-CCCEEEECccCHH--HHHHHhhhCCH
Confidence 4564333333345899999999999999999743 3457899999999774 8999999999998 66889999999
Q ss_pred -ccccCccccc-c--ccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEE
Q 024103 92 -EKDVDGFHPL-N--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV 166 (272)
Q Consensus 92 -~KDvdg~~~~-n--~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~ 166 (272)
.+.+.+++-+ + .|++. |+|+|+ .|+++.|++.+.+++||+++|+|+||+ +|+++..|...|+ +++|+
T Consensus 86 ~A~~iGAVNTv~~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i~ 157 (283)
T PRK14027 86 QATQLGAVNTVVIDATGHTT-GHNTDV------SGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVA 157 (283)
T ss_pred HHHHhCCceEEEECCCCcEE-EEcCCH------HHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEEE
Confidence 8888888433 3 35554 666666 999999987666789999999999998 9999999999996 89999
Q ss_pred eCCCC---CH---------------------hhhcCCCcEEEEecCC---Cc---cccCCCcCCCcEEEEeeeCCCCCCC
Q 024103 167 HALTK---NP---------------------EQITSEADIVIAAAGV---AN---LVRGSWLKPGAVVLDVGTCPVDVSV 216 (272)
Q Consensus 167 ~~~t~---~l---------------------~~~l~~ADIVIsa~g~---p~---~i~~~~vk~g~vviDig~~~~~~~~ 216 (272)
+|+.. .| .+.+..+|+||++|+. ++ .++.+.+.++.+|+|+.|+|.+
T Consensus 158 nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~--- 234 (283)
T PRK14027 158 DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIE--- 234 (283)
T ss_pred cCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCC---
Confidence 98731 11 1234568999988862 22 2555678888999999999976
Q ss_pred CCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024103 217 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 272 (272)
Q Consensus 217 ~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~~ 272 (272)
|+|+ +. +++.++ ++-+|.+ ||++|++++|+.|+|.+
T Consensus 235 -------T~ll-----~~-A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lw~G~~ 270 (283)
T PRK14027 235 -------TELL-----KA-ARALGC--ETLDGTR-----MAIHQAVDAFRLFTGLE 270 (283)
T ss_pred -------CHHH-----HH-HHHCCC--EEEccHH-----HHHHHHHHHHHHHhCCC
Confidence 6787 55 677787 5667787 99999999999999853
No 50
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=99.93 E-value=1.6e-25 Score=203.53 Aligned_cols=210 Identities=20% Similarity=0.207 Sum_probs=168.5
Q ss_pred HHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc-ccccCcccc-cc-
Q 024103 26 VRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHP-LN- 102 (272)
Q Consensus 26 ~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p-~KDvdg~~~-~n- 102 (272)
=..|+.+|+++|+++.|..|+. ++++|.+.++.++.. ++.|++||+|+|+ +..++++.+++ .+.+.+++- ++
T Consensus 16 P~~hn~~~~~~g~~~~y~~~~v--~~~~l~~~~~~~~~~-~~~G~nVT~P~K~--~~~~~~d~~~~~A~~~gavNti~~~ 90 (270)
T TIGR00507 16 PLIHNAFFKQLGLEGPYIAFLV--PPDDLEDALSGFFAL-GFKGANVTSPFKE--EAFQFLDEIDERAKLAGAVNTLKLE 90 (270)
T ss_pred HHHHHHHHHHcCCCcEEEEEec--CHHHHHHHHHHHHhc-CCCEEEECcCCHH--HHHHHhhhCCHHHHHhCCceEEEee
Confidence 4589999999999999999965 678899999999874 8999999999998 66788999999 888887743 34
Q ss_pred ccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH---------
Q 024103 103 IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------- 173 (272)
Q Consensus 103 ~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l--------- 173 (272)
.|++. |+|+ +..|+++.|++.+...++|+++|+|+|++ |++++..|+..|++|++++|+....
T Consensus 91 ~g~l~-g~NT------D~~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~ 162 (270)
T TIGR00507 91 DGKLV-GYNT------DGIGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTVSKAEELAERFQR 162 (270)
T ss_pred CCEEE-EEcC------CHHHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence 34554 5544 45999999998777788999999999986 9999999999999999999874211
Q ss_pred ---------h-hhcCCCcEEEEecCC---Cc----cccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhh
Q 024103 174 ---------E-QITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAM 236 (272)
Q Consensus 174 ---------~-~~l~~ADIVIsa~g~---p~----~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~ 236 (272)
. ....++|+||++|+. +. .++.++++++.+|+|+.|+|.+ |.|. +. +
T Consensus 163 ~~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~----------T~ll-----~~-A 226 (270)
T TIGR00507 163 YGEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGE----------TPFL-----AE-A 226 (270)
T ss_pred cCceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCC----------CHHH-----HH-H
Confidence 1 123578999999985 22 2345678899999999999865 5555 44 6
Q ss_pred hhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 237 RLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 237 ~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
++.++ ++-+|.+ ||++|++.+++.|+|.
T Consensus 227 ~~~G~--~~vdG~~-----Ml~~Qa~~~f~~w~g~ 254 (270)
T TIGR00507 227 KSLGT--KTIDGLG-----MLVAQAALAFELWTGV 254 (270)
T ss_pred HHCCC--eeeCCHH-----HHHHHHHHHHHHHcCC
Confidence 66776 5667777 9999999999999985
No 51
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=99.90 E-value=1.7e-23 Score=206.64 Aligned_cols=221 Identities=20% Similarity=0.255 Sum_probs=171.9
Q ss_pred EEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc-c
Q 024103 14 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (272)
Q Consensus 14 i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p-~ 92 (272)
-++|+.-+-..-=..|+.+|+++|+++.|..|+. ++|.+.++.++. +++.|++||+|||. ...++++.++| +
T Consensus 256 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v----~~l~~~~~~l~~-~~~~G~nVTiP~K~--~v~~~lD~~~~~A 328 (529)
T PLN02520 256 GIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLV----DDLAKFLQTYSS-PDFAGFSCTIPHKE--DALKCCDEVDPIA 328 (529)
T ss_pred EEEcCCcccccCHHHHHHHHHHCCCCcEEEEeeh----hhHHHHHHHHhh-CCCCEEEECcCCHH--HHHHHhccCCHHH
Confidence 3667433322334589999999999999999965 468788888866 58999999999998 66888899999 8
Q ss_pred cccCccc-ccc---ccccccCCCCCccccCCHHHHHHHHHHh----------CCCCccceEEEEcCCcccHHHHHHHHHh
Q 024103 93 KDVDGFH-PLN---IGNLAMRGREPLFIPCTPKGCIELLIRS----------GVEIMGKNAVVIGRSNIVGLPTSLLLQR 158 (272)
Q Consensus 93 KDvdg~~-~~n---~g~l~~~~~~~~~~p~Ta~g~~~~l~~~----------~~~l~gk~v~ViG~g~~vG~~la~~L~~ 158 (272)
+.+.+++ .++ .|++. |+|+|+ .|+++.|++. +.++++|+++|+|+|++ |++++..|++
T Consensus 329 ~~iGAVNTvv~~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~~ 400 (529)
T PLN02520 329 KSIGAINTIIRRPSDGKLV-GYNTDY------IGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAKE 400 (529)
T ss_pred HHhCCceEEEEeCCCCEEE-EEcccH------HHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHHH
Confidence 8888874 333 35554 655555 9999999752 45789999999999997 9999999999
Q ss_pred CCCEEEEEeCCCCC---H--------------hh-hcCCCcEEEEecC---CCc----cccCCCcCCCcEEEEeeeCCCC
Q 024103 159 HHATVSIVHALTKN---P--------------EQ-ITSEADIVIAAAG---VAN----LVRGSWLKPGAVVLDVGTCPVD 213 (272)
Q Consensus 159 ~ga~V~v~~~~t~~---l--------------~~-~l~~ADIVIsa~g---~p~----~i~~~~vk~g~vviDig~~~~~ 213 (272)
+|++|++++|+.+. + .+ ....+|+||++++ .|+ .++.+++++..+|+|+.|+|.+
T Consensus 401 ~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~ 480 (529)
T PLN02520 401 KGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKI 480 (529)
T ss_pred CCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCc
Confidence 99999999986321 1 11 1235789997775 232 2566788889999999999976
Q ss_pred CCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024103 214 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 272 (272)
Q Consensus 214 ~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~~ 272 (272)
|.|+ +. ++++++ ++-+|.+ ||++|++.+++.|+|.+
T Consensus 481 ----------T~ll-----~~-A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~~ 516 (529)
T PLN02520 481 ----------TRLL-----RE-AEESGA--IIVSGTE-----MFIRQAYEQFERFTGLP 516 (529)
T ss_pred ----------CHHH-----HH-HHHCCC--eEeCcHH-----HHHHHHHHHHHHHhCCC
Confidence 6777 55 677887 5667777 99999999999999863
No 52
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=99.89 E-value=9.4e-23 Score=199.13 Aligned_cols=219 Identities=16% Similarity=0.166 Sum_probs=170.8
Q ss_pred EEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc-c
Q 024103 14 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (272)
Q Consensus 14 i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p-~ 92 (272)
-.+|+.-+-..-=..|+.+|+++|+++.|..|+. +++++.+.++.+.. +++.|++||+|||. ...++++.+++ +
T Consensus 219 ~liG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVT~P~K~--~v~~~~d~~~~~A 293 (477)
T PRK09310 219 GLIGDPVDRSISHLSHNPLFSQLSLNCPYIKLPL--TPQELPKFFSTIRD-LPFLGLSVTMPLKT--AVLDFLDKLDPSV 293 (477)
T ss_pred EEECCCcccccCHHHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHHh-CCCCEEEECccCHH--HHHHHhccCCHHH
Confidence 3667543323334579999999999999999965 67789888988876 47999999999997 66788899999 8
Q ss_pred cccCcccc-cc-ccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 93 KDVDGFHP-LN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 93 KDvdg~~~-~n-~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+.+.+++- ++ .|++. |+|+|+ .|+++.|++.+.++++|+++|+|+|++ |++++..|.+.|++|++++|+.
T Consensus 294 ~~iGAVNTv~~~~g~l~-G~NTD~------~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~~ 365 (477)
T PRK09310 294 KLCGSCNTLVFRNGKIE-GYNTDG------EGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRTK 365 (477)
T ss_pred HHhCcceEEEeeCCEEE-EEecCH------HHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCH
Confidence 88888743 34 45554 655555 999999999999999999999999986 9999999999999999998864
Q ss_pred CCHh----------------hhcCCCcEEEEecCCCccccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhh
Q 024103 171 KNPE----------------QITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEE 234 (272)
Q Consensus 171 ~~l~----------------~~l~~ADIVIsa~g~p~~i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~ 234 (272)
...+ ..+.++|+||++++..-.+. +.+. .+|+|+.|+|.+ |.|. +.
T Consensus 366 ~~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~~~~-~~l~--~~v~D~~Y~P~~----------T~ll-----~~ 427 (477)
T PRK09310 366 AHAEALASRCQGKAFPLESLPELHRIDIIINCLPPSVTIP-KAFP--PCVVDINTLPKH----------SPYT-----QY 427 (477)
T ss_pred HHHHHHHHHhccceechhHhcccCCCCEEEEcCCCCCcch-hHHh--hhEEeccCCCCC----------CHHH-----HH
Confidence 2111 11568899999997543333 2333 389999999875 5555 44
Q ss_pred hhhhceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024103 235 AMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 271 (272)
Q Consensus 235 ~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~~~~~~~ 271 (272)
+++.++ ++.+|.+ ||++|++++++.|+|.
T Consensus 428 -A~~~G~--~~~~G~~-----Ml~~Qa~~~f~lw~g~ 456 (477)
T PRK09310 428 -ARSQGS--SIIYGYE-----MFAEQALLQFRLWFPT 456 (477)
T ss_pred -HHHCcC--EEECcHH-----HHHHHHHHHHHHHcCC
Confidence 666777 5667777 9999999999999985
No 53
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.64 E-value=1e-15 Score=141.27 Aligned_cols=131 Identities=22% Similarity=0.351 Sum_probs=105.5
Q ss_pred CCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------CHhhhcCCC
Q 024103 118 CTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSEA 180 (272)
Q Consensus 118 ~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~----------------~l~~~l~~A 180 (272)
+|+++ +...++++++++.|++|+|+|+|.+ |++++..|.+.|++|++++|+.. ++.+.++++
T Consensus 133 ~~aegav~~a~~~~~~~l~g~kvlViG~G~i-G~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~a 211 (296)
T PRK08306 133 PTAEGAIMMAIEHTPITIHGSNVLVLGFGRT-GMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKI 211 (296)
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCC
Confidence 35555 5566778889999999999999995 99999999999999999998742 456778999
Q ss_pred cEEEEecCCCccccCCC---cCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhh---ceEeccCCCcccHHHH
Q 024103 181 DIVIAAAGVANLVRGSW---LKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTV 254 (272)
Q Consensus 181 DIVIsa~g~p~~i~~~~---vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~---~~~~tpvpGGvGp~T~ 254 (272)
|+||++++.+ +++.++ ++++++|||++++| |++||+.+.+. +.+.+++||+|+|+|.
T Consensus 212 DiVI~t~p~~-~i~~~~l~~~~~g~vIIDla~~p----------------ggtd~~~a~~~Gv~~~~~~~lpg~vap~ta 274 (296)
T PRK08306 212 DIIFNTIPAL-VLTKEVLSKMPPEALIIDLASKP----------------GGTDFEYAEKRGIKALLAPGLPGKVAPKTA 274 (296)
T ss_pred CEEEECCChh-hhhHHHHHcCCCCcEEEEEccCC----------------CCcCeeehhhCCeEEEEECCCCccCCHHHH
Confidence 9999998643 456554 58899999999876 44666554333 5556899999999999
Q ss_pred HHHHHHHHHHHH
Q 024103 255 AMLLSNTLDSAK 266 (272)
Q Consensus 255 amL~~n~v~a~~ 266 (272)
+.++.|.+..+-
T Consensus 275 ~~~~~~~i~~~l 286 (296)
T PRK08306 275 GQILANVLSQLL 286 (296)
T ss_pred HHHHHHHHHHHH
Confidence 999999987764
No 54
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.56 E-value=1.6e-14 Score=132.90 Aligned_cols=130 Identities=25% Similarity=0.372 Sum_probs=102.1
Q ss_pred cCCHHHHHH-HHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------CHhhhcCC
Q 024103 117 PCTPKGCIE-LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSE 179 (272)
Q Consensus 117 p~Ta~g~~~-~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~----------------~l~~~l~~ 179 (272)
.+|+++++. .++.++++++||+++|+|.|++ |++++..|...|++|++++|+.+ ++.+.+++
T Consensus 131 ~~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~ 209 (287)
T TIGR02853 131 IPTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAE 209 (287)
T ss_pred HhHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhcc
Confidence 356776554 4667788999999999999995 99999999999999999998742 34567899
Q ss_pred CcEEEEecCCCccccCC---CcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhce---Eecc-CCCcccHH
Q 024103 180 ADIVIAAAGVANLVRGS---WLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLAS---VITP-VPGGVGPM 252 (272)
Q Consensus 180 ADIVIsa~g~p~~i~~~---~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~---~~tp-vpGGvGp~ 252 (272)
+|+||++++.+ +++.+ .+++++++||++++| |.+||+. +++.+ ...| .||.|+|.
T Consensus 210 aDiVint~P~~-ii~~~~l~~~k~~aliIDlas~P----------------g~tdf~~-Ak~~G~~a~~~~glPg~~ap~ 271 (287)
T TIGR02853 210 IDIVINTIPAL-VLTADVLSKLPKHAVIIDLASKP----------------GGTDFEY-AKKRGIKALLAPGLPGIVAPK 271 (287)
T ss_pred CCEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCC----------------CCCCHHH-HHHCCCEEEEeCCCCcccCch
Confidence 99999998653 34443 468899999999986 5567744 55433 2234 89999999
Q ss_pred HHHHHHHHHHHHH
Q 024103 253 TVAMLLSNTLDSA 265 (272)
Q Consensus 253 T~amL~~n~v~a~ 265 (272)
|++.++.|++...
T Consensus 272 ta~~i~~~~~~~~ 284 (287)
T TIGR02853 272 TAGKILANVLSEL 284 (287)
T ss_pred hHHHHHHHHHHHH
Confidence 9999999998653
No 55
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=99.33 E-value=1.2e-12 Score=107.52 Aligned_cols=86 Identities=26% Similarity=0.289 Sum_probs=69.5
Q ss_pred HHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCC--------------------CCHhhhcCCCcEEE
Q 024103 126 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT--------------------KNPEQITSEADIVI 184 (272)
Q Consensus 126 ~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~-V~v~~~~t--------------------~~l~~~l~~ADIVI 184 (272)
+.++...+++||+++|+|+|++ ||+++..|..+|++ |++++|+. .++.+.+.++|+||
T Consensus 2 la~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI 80 (135)
T PF01488_consen 2 LAKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVI 80 (135)
T ss_dssp HHCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEE
T ss_pred hhHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEE
Confidence 3444445899999999999997 99999999999985 99999973 24456788999999
Q ss_pred EecCCCcc-ccCCCcCCC----cEEEEeeeCCC
Q 024103 185 AAAGVANL-VRGSWLKPG----AVVLDVGTCPV 212 (272)
Q Consensus 185 sa~g~p~~-i~~~~vk~g----~vviDig~~~~ 212 (272)
+||+.+.. ++++++++. .+++|++++++
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~ 113 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAVPRD 113 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-S
T ss_pred EecCCCCcccCHHHHHHHHhhhhceeccccCCC
Confidence 99998865 788999886 49999998775
No 56
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=99.32 E-value=1.5e-11 Score=101.79 Aligned_cols=128 Identities=27% Similarity=0.400 Sum_probs=97.0
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC-------------------CHhhhcC
Q 024103 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-------------------NPEQITS 178 (272)
Q Consensus 119 Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t~-------------------~l~~~l~ 178 (272)
+..|+.+.+++.+.++++++++|+|.|++ |++++..|.+.| ..|++++++.. +..+.++
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLA 80 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccc
Confidence 34899999999999999999999999885 999999999986 68999987631 2234468
Q ss_pred CCcEEEEecCCCcc------ccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHH
Q 024103 179 EADIVIAAAGVANL------VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPM 252 (272)
Q Consensus 179 ~ADIVIsa~g~p~~------i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~ 252 (272)
++|+||++++.+.. +....++++.+++|+++.+.. +.+. +. .++.+. .+.+|.
T Consensus 81 ~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~----------~~l~-----~~-~~~~g~--~~v~g~--- 139 (155)
T cd01065 81 EADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLE----------TPLL-----KE-ARALGA--KTIDGL--- 139 (155)
T ss_pred cCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCC----------CHHH-----HH-HHHCCC--ceeCCH---
Confidence 89999999985432 333446889999999988643 2222 33 444554 334444
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 024103 253 TVAMLLSNTLDSAKRAYG 270 (272)
Q Consensus 253 T~amL~~n~v~a~~~~~~ 270 (272)
.||+.|.+++++.|+|
T Consensus 140 --~~~~~q~~~~~~~~~~ 155 (155)
T cd01065 140 --EMLVYQAAEAFELWTG 155 (155)
T ss_pred --HHHHHHHHHHHHHhcC
Confidence 4999999999999986
No 57
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=99.29 E-value=3.4e-12 Score=122.13 Aligned_cols=146 Identities=18% Similarity=0.247 Sum_probs=112.3
Q ss_pred CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHH
Q 024103 50 TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIR 129 (272)
Q Consensus 50 ~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~ 129 (272)
.|.|++.+++..-....=.|.. ...-..-+.++|+-.|-|..-|.++.|.... +.+++++.++
T Consensus 109 GE~QILGQVK~Ay~~a~~~g~~------g~~L~~lFqkAi~~gKrvRseT~I~~~~VSi-----------~saAv~lA~~ 171 (414)
T COG0373 109 GETQILGQVKDAYAKAQENGTL------GKVLNRLFQKAISVGKRVRSETGIGKGAVSI-----------SSAAVELAKR 171 (414)
T ss_pred CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHhhcccCCCCCccch-----------HHHHHHHHHH
Confidence 4567777776654432222221 1222234556888899988878777665542 3889999999
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC-----------------CCHhhhcCCCcEEEEecCCCc
Q 024103 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT-----------------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 130 ~~~~l~gk~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t-----------------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
...++++|+++|||+|.+ |..++.+|.++| ..|+|+||+. .++.+++.++|+|||+||.|+
T Consensus 172 ~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 172 IFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred HhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCc
Confidence 988999999999999997 999999999999 5899999983 467789999999999999999
Q ss_pred c-ccCCCcCCC------cEEEEeeeCCCC
Q 024103 192 L-VRGSWLKPG------AVVLDVGTCPVD 213 (272)
Q Consensus 192 ~-i~~~~vk~g------~vviDig~~~~~ 213 (272)
+ ++.+++... .++||++.||+-
T Consensus 251 ~ii~~~~ve~a~~~r~~~livDiavPRdi 279 (414)
T COG0373 251 PIITREMVERALKIRKRLLIVDIAVPRDV 279 (414)
T ss_pred cccCHHHHHHHHhcccCeEEEEecCCCCC
Confidence 7 688877442 589999999874
No 58
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=99.26 E-value=1.2e-11 Score=104.52 Aligned_cols=92 Identities=24% Similarity=0.401 Sum_probs=67.6
Q ss_pred HHHHHHH-HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEe
Q 024103 121 KGCIELL-IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAA 186 (272)
Q Consensus 121 ~g~~~~l-~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa 186 (272)
+..++.+ +..+..+.||+++|+|+|.+ ||.+|+.|..+|+.|+|+..+. ..+++.++++|++|++
T Consensus 7 ~S~~d~i~r~t~~~l~Gk~vvV~GYG~v-G~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vta 85 (162)
T PF00670_consen 7 QSLVDGIMRATNLMLAGKRVVVIGYGKV-GKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTA 85 (162)
T ss_dssp HHHHHHHHHHH-S--TTSEEEEE--SHH-HHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-
T ss_pred hhHHHHHHhcCceeeCCCEEEEeCCCcc-cHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEEC
Confidence 4444443 46789999999999999995 9999999999999999998763 3678899999999999
Q ss_pred cCCCccccCCCc---CCCcEEEEeeeCCCC
Q 024103 187 AGVANLVRGSWL---KPGAVVLDVGTCPVD 213 (272)
Q Consensus 187 ~g~p~~i~~~~v---k~g~vviDig~~~~~ 213 (272)
||..+.++.+++ |+|+++.++|+...|
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSSSTTS
T ss_pred CCCccccCHHHHHHhcCCeEEeccCcCcee
Confidence 999988887764 899999999988655
No 59
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=99.16 E-value=1.2e-10 Score=88.29 Aligned_cols=78 Identities=29% Similarity=0.460 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHhC----CCCccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCCCCHhhhcCCCcEEEEecCCCcc
Q 024103 118 CTPKGCIELLIRSG----VEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTKNPEQITSEADIVIAAAGVANL 192 (272)
Q Consensus 118 ~Ta~g~~~~l~~~~----~~l~gk~v~ViG~g~~vG~~la~~L~~~-ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~ 192 (272)
||+.++++.|++.. .++++|+++|+|+|.. |++++.+|.+. +.+|++++| |++|++++.+++
T Consensus 1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~~-g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~ 67 (86)
T cd05191 1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGEV-GKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP 67 (86)
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence 68888888887654 4589999999999885 99999999998 578999977 999999999998
Q ss_pred ccC---CCcCCCcEEEEee
Q 024103 193 VRG---SWLKPGAVVLDVG 208 (272)
Q Consensus 193 i~~---~~vk~g~vviDig 208 (272)
+.+ .+++++.+|+|+.
T Consensus 68 ~~~~~~~~~~~~~~v~~~a 86 (86)
T cd05191 68 VLEEATAKINEGAVVIDLA 86 (86)
T ss_pred chHHHHHhcCCCCEEEecC
Confidence 866 6788999999973
No 60
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=99.15 E-value=4.5e-11 Score=115.23 Aligned_cols=146 Identities=18% Similarity=0.160 Sum_probs=104.4
Q ss_pred CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHH
Q 024103 50 TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIR 129 (272)
Q Consensus 50 ~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~ 129 (272)
.|.|++.+++..-+...=.|.. ..+-..-+.+++.-.|.|.--|.++.|.. ..+.+.+++.++
T Consensus 112 GE~QIlgQVK~A~~~A~~~g~~------g~~L~~lf~~A~~~aKrVrteT~I~~~~v-----------Sv~~~Av~la~~ 174 (414)
T PRK13940 112 GEPQILGQVKDSYTLSKKNHAI------GKELDRVFQKVFATAKRVRSETRIGHCPV-----------SVAFSAITLAKR 174 (414)
T ss_pred CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHHhccCCCCCCc-----------CHHHHHHHHHHH
Confidence 4567777776654321111211 11122334447777787766554444332 224678899988
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC------------------CCHhhhcCCCcEEEEecCCC
Q 024103 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT------------------KNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 130 ~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t------------------~~l~~~l~~ADIVIsa~g~p 190 (272)
...++.||+|+|||+|++ |+.++..|..+|+ .+++++|+. .++.+.+.+||+||+||+.|
T Consensus 175 ~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~ 253 (414)
T PRK13940 175 QLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVL 253 (414)
T ss_pred HhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCC
Confidence 877899999999999997 9999999999995 799999973 22456789999999999999
Q ss_pred cc-ccCCCcCC-CcEEEEeeeCCCC
Q 024103 191 NL-VRGSWLKP-GAVVLDVGTCPVD 213 (272)
Q Consensus 191 ~~-i~~~~vk~-g~vviDig~~~~~ 213 (272)
++ |+.++++. ..++||++.|++-
T Consensus 254 ~~vi~~~~~~~~~~~~iDLavPRdi 278 (414)
T PRK13940 254 EYIVTCKYVGDKPRVFIDISIPQAL 278 (414)
T ss_pred CeeECHHHhCCCCeEEEEeCCCCCC
Confidence 97 68888753 4689999999874
No 61
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=99.14 E-value=5.3e-11 Score=115.78 Aligned_cols=114 Identities=23% Similarity=0.279 Sum_probs=86.7
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEecCCCccc
Q 024103 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLV 193 (272)
Q Consensus 127 l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa~g~p~~i 193 (272)
++..+..+.||+++|+|+|. +|+++++.|...|++|++++++. .++.+.++.||+||+++|.+++|
T Consensus 245 ~R~~~~~LaGKtVgVIG~G~-IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~iI 323 (476)
T PTZ00075 245 FRATDVMIAGKTVVVCGYGD-VGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDII 323 (476)
T ss_pred HHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCccccc
Confidence 45568899999999999998 59999999999999999997652 24678899999999999999999
Q ss_pred cCCCc---CCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCC
Q 024103 194 RGSWL---KPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG 247 (272)
Q Consensus 194 ~~~~v---k~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpG 247 (272)
+.++| |+|++++++|....+...+.+ +..+++|..++.+....+| .|+
T Consensus 324 ~~e~~~~MKpGAiLINvGr~d~Ei~i~aL-----~~~~~vdv~evep~v~~~~-~~~ 374 (476)
T PTZ00075 324 TLEHMRRMKNNAIVGNIGHFDNEIQVAEL-----EAYPGIEIVEIKPQVDRYT-FPD 374 (476)
T ss_pred CHHHHhccCCCcEEEEcCCCchHHhHHHH-----HhcCCceeecccCCCCeEE-eCC
Confidence 88776 999999999988533111111 2235676555555555554 443
No 62
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=98.99 E-value=8e-10 Score=98.42 Aligned_cols=92 Identities=22% Similarity=0.316 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCC----CC--------------------
Q 024103 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHAL----TK-------------------- 171 (272)
Q Consensus 119 Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga---~V~v~~~~----t~-------------------- 171 (272)
+..|++..++..+.++++++++|+|+|++ |+.++.+|...|+ .+++++|+ ..
T Consensus 8 ~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~ 86 (226)
T cd05311 8 TLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK 86 (226)
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc
Confidence 44778999999999999999999999997 9999999999997 49999997 11
Q ss_pred ---CHhhhcCCCcEEEEecCCCccccCCCcC---CCcEEEEeeeCCCC
Q 024103 172 ---NPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVGTCPVD 213 (272)
Q Consensus 172 ---~l~~~l~~ADIVIsa~g~p~~i~~~~vk---~g~vviDig~~~~~ 213 (272)
++.+.++++|+||++++ ++++++++++ ++.+|+|+. ||.+
T Consensus 87 ~~~~l~~~l~~~dvlIgaT~-~G~~~~~~l~~m~~~~ivf~ls-nP~~ 132 (226)
T cd05311 87 TGGTLKEALKGADVFIGVSR-PGVVKKEMIKKMAKDPIVFALA-NPVP 132 (226)
T ss_pred ccCCHHHHHhcCCEEEeCCC-CCCCCHHHHHhhCCCCEEEEeC-CCCC
Confidence 23355677999999999 8888888776 788999987 7754
No 63
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.93 E-value=7.1e-09 Score=97.52 Aligned_cols=87 Identities=22% Similarity=0.248 Sum_probs=72.4
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhC-C-CEEEEEeCCCC---------------CHhhhcCCCcEEEEecCC
Q 024103 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALTK---------------NPEQITSEADIVIAAAGV 189 (272)
Q Consensus 127 l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~-g-a~V~v~~~~t~---------------~l~~~l~~ADIVIsa~g~ 189 (272)
.+..+.+++||+|+|+|++|.+|+.+++.|..+ | ..+++++|+.. ++.+.+.++|+||++++.
T Consensus 146 ~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~ 225 (340)
T PRK14982 146 APRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASM 225 (340)
T ss_pred HHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcC
Confidence 445677899999999999877899999999864 5 48999998631 233678899999999998
Q ss_pred Ccc--ccCCCcCCCcEEEEeeeCCCC
Q 024103 190 ANL--VRGSWLKPGAVVLDVGTCPVD 213 (272)
Q Consensus 190 p~~--i~~~~vk~g~vviDig~~~~~ 213 (272)
|+. ++++++++++++||++.+++-
T Consensus 226 ~~~~~I~~~~l~~~~~viDiAvPRDV 251 (340)
T PRK14982 226 PKGVEIDPETLKKPCLMIDGGYPKNL 251 (340)
T ss_pred CcCCcCCHHHhCCCeEEEEecCCCCC
Confidence 764 789999999999999999864
No 64
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=98.92 E-value=1.5e-09 Score=101.80 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=82.8
Q ss_pred HhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEE
Q 024103 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVS 164 (272)
Q Consensus 86 ~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~ 164 (272)
..++.-.|.|.--|.++.+.. .-+.+++++++.. -+++||+++|||+|.+ |+.++..|.++|+ .++
T Consensus 136 ~~A~~~aKrVRteT~I~~~~v-----------Sv~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~ 202 (338)
T PRK00676 136 QKALKEGKVFRSKGGAPYAEV-----------TIESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRIT 202 (338)
T ss_pred HHHHHHHHHHhhhcCCCCCCc-----------CHHHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEE
Confidence 335655666654443333222 1235567777664 5799999999999997 9999999999995 799
Q ss_pred EEeCCC-----CCHh----hhcCCCcEEEEe---cCCCcc-ccCCCcCC--CcEEEEeeeCCCC
Q 024103 165 IVHALT-----KNPE----QITSEADIVIAA---AGVANL-VRGSWLKP--GAVVLDVGTCPVD 213 (272)
Q Consensus 165 v~~~~t-----~~l~----~~l~~ADIVIsa---~g~p~~-i~~~~vk~--g~vviDig~~~~~ 213 (272)
++||+. .++. ++..++||||++ |+.|++ ++.+++++ ..++||++.|++-
T Consensus 203 v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~~~~~~~~~r~~iDLAvPRdI 266 (338)
T PRK00676 203 FCSRQQLTLPYRTVVREELSFQDPYDVIFFGSSESAYAFPHLSWESLADIPDRIVFDFNVPRTF 266 (338)
T ss_pred EEcCCccccchhhhhhhhhhcccCCCEEEEcCCcCCCCCceeeHHHHhhccCcEEEEecCCCCC
Confidence 999984 2222 457799999997 677876 57666643 2489999999874
No 65
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.91 E-value=1.6e-08 Score=87.36 Aligned_cols=95 Identities=32% Similarity=0.354 Sum_probs=71.0
Q ss_pred CHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------
Q 024103 119 TPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------- 171 (272)
Q Consensus 119 Ta~g~~~~----l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~----------------------- 171 (272)
|+.+.++. |++.+.++++++++|+|+.|.+|+.++..|.+.|+.|++++|+..
T Consensus 7 ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~ 86 (194)
T cd01078 7 TAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETS 86 (194)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC
Confidence 55555444 445567999999999997444699999999999999999987621
Q ss_pred ---CHhhhcCCCcEEEEecCCCc--cccCC-CcCCCcEEEEeeeCCCC
Q 024103 172 ---NPEQITSEADIVIAAAGVAN--LVRGS-WLKPGAVVLDVGTCPVD 213 (272)
Q Consensus 172 ---~l~~~l~~ADIVIsa~g~p~--~i~~~-~vk~g~vviDig~~~~~ 213 (272)
++.+.++++|+||++++.+. ....+ ..+++.+++|+.++|..
T Consensus 87 ~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~ 134 (194)
T cd01078 87 DDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPV 134 (194)
T ss_pred CHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCC
Confidence 12356788999999998766 33333 34568899999999864
No 66
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.82 E-value=9e-09 Score=99.44 Aligned_cols=95 Identities=23% Similarity=0.332 Sum_probs=79.8
Q ss_pred CCHHHHHHHHHHh-CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEE
Q 024103 118 CTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV 183 (272)
Q Consensus 118 ~Ta~g~~~~l~~~-~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIV 183 (272)
.|.++++..+++. ++.+.||+|+|+|+|.+ |+.+++.|...|++|++++++. .++.+.++.+|+|
T Consensus 193 gt~~s~~~ai~rat~~~l~Gk~VlViG~G~I-G~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVV 271 (425)
T PRK05476 193 GTGESLLDGIKRATNVLIAGKVVVVAGYGDV-GKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIF 271 (425)
T ss_pred HHHhhhHHHHHHhccCCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEE
Confidence 4678888777765 78899999999999985 9999999999999999998653 2356778899999
Q ss_pred EEecCCCccccCCC---cCCCcEEEEeeeCCCC
Q 024103 184 IAAAGVANLVRGSW---LKPGAVVLDVGTCPVD 213 (272)
Q Consensus 184 Isa~g~p~~i~~~~---vk~g~vviDig~~~~~ 213 (272)
|+++|.++.++.++ +|+|++++++|....+
T Consensus 272 I~aTG~~~vI~~~~~~~mK~GailiNvG~~d~E 304 (425)
T PRK05476 272 VTATGNKDVITAEHMEAMKDGAILANIGHFDNE 304 (425)
T ss_pred EECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCc
Confidence 99999988887544 5899999999987643
No 67
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=98.79 E-value=1.1e-08 Score=95.60 Aligned_cols=92 Identities=24% Similarity=0.370 Sum_probs=76.4
Q ss_pred HHHHHHH-HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEe
Q 024103 121 KGCIELL-IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAA 186 (272)
Q Consensus 121 ~g~~~~l-~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa 186 (272)
++.+.-+ +..++-+.||+++|.|+|++ ||.+|+.|...||.|.|..-.. ..+.+..+.+||+||+
T Consensus 193 qS~~DgI~RaTn~liaGK~vVV~GYG~v-GrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~ 271 (420)
T COG0499 193 QSLLDGILRATNVLLAGKNVVVAGYGWV-GRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTA 271 (420)
T ss_pred hhHHHHHHhhhceeecCceEEEeccccc-chHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEc
Confidence 4444433 34788899999999999995 9999999999999999987653 2457888999999999
Q ss_pred cCCCccccCCCc---CCCcEEEEeeeCCCC
Q 024103 187 AGVANLVRGSWL---KPGAVVLDVGTCPVD 213 (272)
Q Consensus 187 ~g~p~~i~~~~v---k~g~vviDig~~~~~ 213 (272)
||.-+.|+.+++ |+|+++.++|+.-.|
T Consensus 272 TGnkdVi~~eh~~~MkDgaIl~N~GHFd~E 301 (420)
T COG0499 272 TGNKDVIRKEHFEKMKDGAILANAGHFDVE 301 (420)
T ss_pred cCCcCccCHHHHHhccCCeEEeccccccee
Confidence 999999988875 789999999976543
No 68
>PLN00203 glutamyl-tRNA reductase
Probab=98.76 E-value=7.9e-09 Score=102.26 Aligned_cols=117 Identities=15% Similarity=0.157 Sum_probs=87.6
Q ss_pred HHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhCC--CCccceEEEEcCCcccHHHHHHHHHhCCC-
Q 024103 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGV--EIMGKNAVVIGRSNIVGLPTSLLLQRHHA- 161 (272)
Q Consensus 85 i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~--~l~gk~v~ViG~g~~vG~~la~~L~~~ga- 161 (272)
+..++.-.|.|.--|.++.|.. ..+.+.+++.++..- ++.+++|+|||+|++ |+.++..|...|+
T Consensus 224 F~~Ai~~~KrVRteT~I~~~~v-----------Sv~s~Av~la~~~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~ 291 (519)
T PLN00203 224 FKHAITAGKRVRTETNIASGAV-----------SVSSAAVELALMKLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCT 291 (519)
T ss_pred HHHHHHHHHHHhhccCCCCCCc-----------CHHHHHHHHHHHhcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCC
Confidence 3346666777765554443322 234678888887654 499999999999996 9999999999996
Q ss_pred EEEEEeCCC--------------------CCHhhhcCCCcEEEEecCCCcc-ccCCCcCC----------CcEEEEeeeC
Q 024103 162 TVSIVHALT--------------------KNPEQITSEADIVIAAAGVANL-VRGSWLKP----------GAVVLDVGTC 210 (272)
Q Consensus 162 ~V~v~~~~t--------------------~~l~~~l~~ADIVIsa~g~p~~-i~~~~vk~----------g~vviDig~~ 210 (272)
.|++++|+. .++.+.+.+||+||++|+.++. ++++|+++ ..++||++.+
T Consensus 292 ~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 292 KMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred eEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 799999872 1344667899999999998875 78887643 2489999999
Q ss_pred CCC
Q 024103 211 PVD 213 (272)
Q Consensus 211 ~~~ 213 (272)
++-
T Consensus 372 RdI 374 (519)
T PLN00203 372 RNV 374 (519)
T ss_pred CCC
Confidence 863
No 69
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.69 E-value=6.4e-08 Score=93.08 Aligned_cols=94 Identities=28% Similarity=0.378 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHH-hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEE
Q 024103 118 CTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV 183 (272)
Q Consensus 118 ~Ta~g~~~~l~~-~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIV 183 (272)
+|.+.+++.+.+ .++.+.||+|+|+|+|.+ |+.+++.|...|++|++++++. .++.+.++.+|+|
T Consensus 176 g~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVV 254 (406)
T TIGR00936 176 GTGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF 254 (406)
T ss_pred ccchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEE
Confidence 455666665544 578899999999999995 9999999999999999997553 2356778899999
Q ss_pred EEecCCCccccC---CCcCCCcEEEEeeeCCC
Q 024103 184 IAAAGVANLVRG---SWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 184 Isa~g~p~~i~~---~~vk~g~vviDig~~~~ 212 (272)
|+++|.++.++. ..+++|++++.+|....
T Consensus 255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~~ 286 (406)
T TIGR00936 255 ITATGNKDVIRGEHFENMKDGAIVANIGHFDV 286 (406)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence 999999888876 35699999999998754
No 70
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.67 E-value=4.8e-08 Score=94.48 Aligned_cols=93 Identities=18% Similarity=0.267 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC-----------------CHhhhcCCCc
Q 024103 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------------NPEQITSEAD 181 (272)
Q Consensus 120 a~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t~-----------------~l~~~l~~AD 181 (272)
+...+++.+....++.|++|+|+|+|.+ |+.++..|...|+ .|++++|+.. ++.+.+..+|
T Consensus 166 ~~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aD 244 (423)
T PRK00045 166 ASAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEAD 244 (423)
T ss_pred HHHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCC
Confidence 3455666655444789999999999886 9999999999997 8999998631 2335678899
Q ss_pred EEEEecCCCcc-ccCCCcCC--------CcEEEEeeeCCCC
Q 024103 182 IVIAAAGVANL-VRGSWLKP--------GAVVLDVGTCPVD 213 (272)
Q Consensus 182 IVIsa~g~p~~-i~~~~vk~--------g~vviDig~~~~~ 213 (272)
+||++||.|+. ++++|+++ +.+++|++.+++-
T Consensus 245 vVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~Prdi 285 (423)
T PRK00045 245 IVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVPRDI 285 (423)
T ss_pred EEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCCCCC
Confidence 99999998875 78888843 4799999987753
No 71
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.65 E-value=1.3e-07 Score=90.14 Aligned_cols=124 Identities=25% Similarity=0.301 Sum_probs=86.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------CCHhhhcCCCcEEEEecCC---
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAGV--- 189 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------------------~~l~~~l~~ADIVIsa~g~--- 189 (272)
+.+++|+|+|+|.+ |+.++..|...|++|++++++. .++.+.++++|+||++++.
T Consensus 165 l~~~~VlViGaG~v-G~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGVV-GTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 57889999999885 9999999999999999998752 1345677899999999843
Q ss_pred --CccccCCCc---CCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhh---hceEeccCCCcccHHHHHHHHHHH
Q 024103 190 --ANLVRGSWL---KPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMR---LASVITPVPGGVGPMTVAMLLSNT 261 (272)
Q Consensus 190 --p~~i~~~~v---k~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~---~~~~~tpvpGGvGp~T~amL~~n~ 261 (272)
|.+++.+++ +++.+|||+++.+.- +... ++ .+..|+..+.. ....+.-.||-+ |.|...++.|.
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~d~GG-~~e~-----~~-~t~~d~p~~~~~Gv~~~~v~nlP~~~-p~~aS~~~~~~ 315 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAIDQGG-CVET-----SR-PTTHDQPTYAVHDVVHYCVANMPGAV-PKTSTYALTNA 315 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEecCCCC-CccC-----Cc-CCCCCCCEEEECCeEEEEeCCccccc-HHHHHHHHHHH
Confidence 555777664 789999999987631 0000 00 11111111110 123455688888 99999999888
Q ss_pred HHHHH
Q 024103 262 LDSAK 266 (272)
Q Consensus 262 v~a~~ 266 (272)
+..+-
T Consensus 316 l~~~l 320 (370)
T TIGR00518 316 TMPYV 320 (370)
T ss_pred HHHHH
Confidence 76553
No 72
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.64 E-value=4.5e-08 Score=94.58 Aligned_cols=92 Identities=24% Similarity=0.302 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC-----------------CHhhhcCCCc
Q 024103 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-----------------NPEQITSEAD 181 (272)
Q Consensus 120 a~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t~-----------------~l~~~l~~AD 181 (272)
+.+++++.++...++.|++|+|+|+|.+ |+.++..|...| ..|++++|+.. ++.+.+..+|
T Consensus 164 ~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aD 242 (417)
T TIGR01035 164 SSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEAD 242 (417)
T ss_pred HHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCC
Confidence 4556666666656799999999999886 999999999999 68999998631 2446678999
Q ss_pred EEEEecCCCcc-ccCCCcCC-------CcEEEEeeeCCC
Q 024103 182 IVIAAAGVANL-VRGSWLKP-------GAVVLDVGTCPV 212 (272)
Q Consensus 182 IVIsa~g~p~~-i~~~~vk~-------g~vviDig~~~~ 212 (272)
+||++||.|+. ++++|+++ ..+++|++.+++
T Consensus 243 vVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prd 281 (417)
T TIGR01035 243 IVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRD 281 (417)
T ss_pred EEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 99999998875 78888743 359999997765
No 73
>PLN02494 adenosylhomocysteinase
Probab=98.52 E-value=2.4e-07 Score=90.39 Aligned_cols=91 Identities=24% Similarity=0.330 Sum_probs=73.7
Q ss_pred CHHHHHHHHH-HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcCCCcEEE
Q 024103 119 TPKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVI 184 (272)
Q Consensus 119 Ta~g~~~~l~-~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------~l~~~l~~ADIVI 184 (272)
|-+.+++.+. ..++.+.||+++|+|+|.+ |+.+++.+...|++|+++++... ++.+.++.+|+||
T Consensus 236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI 314 (477)
T PLN02494 236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV 314 (477)
T ss_pred ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence 3345555443 4578899999999999985 99999999999999999876531 3567788999999
Q ss_pred EecCCCccccC---CCcCCCcEEEEeeeC
Q 024103 185 AAAGVANLVRG---SWLKPGAVVLDVGTC 210 (272)
Q Consensus 185 sa~g~p~~i~~---~~vk~g~vviDig~~ 210 (272)
+++|..+++.. +.+|+|++++.+|..
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 99998887744 357999999999984
No 74
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.50 E-value=3.5e-07 Score=85.02 Aligned_cols=92 Identities=22% Similarity=0.289 Sum_probs=69.3
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC-----------------CHhhhcCCCc
Q 024103 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-----------------NPEQITSEAD 181 (272)
Q Consensus 120 a~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t~-----------------~l~~~l~~AD 181 (272)
+...++..+...-++.|++|+|+|+|.+ |+.++.+|...| ..|++++|+.+ ++.+.++++|
T Consensus 162 ~~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aD 240 (311)
T cd05213 162 SSAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEAD 240 (311)
T ss_pred HHHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCC
Confidence 3445677766555689999999999886 999999999877 47999998631 2456678899
Q ss_pred EEEEecCCCcc---ccC---CCcCCCcEEEEeeeCCC
Q 024103 182 IVIAAAGVANL---VRG---SWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 182 IVIsa~g~p~~---i~~---~~vk~g~vviDig~~~~ 212 (272)
+||++||.|+. +.. ..-.++.+++|++.+++
T Consensus 241 vVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrd 277 (311)
T cd05213 241 VVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRD 277 (311)
T ss_pred EEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCC
Confidence 99999998875 211 12235789999997765
No 75
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.50 E-value=2.3e-07 Score=79.39 Aligned_cols=82 Identities=26% Similarity=0.361 Sum_probs=65.6
Q ss_pred HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEecCC-C---c
Q 024103 129 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV-A---N 191 (272)
Q Consensus 129 ~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa~g~-p---~ 191 (272)
..+.++.||+|.|+|.|.+ |+.++.+|...|++|+.++++. .++.+.+++||+|+...+. | +
T Consensus 29 ~~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~ 107 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRG 107 (178)
T ss_dssp TTBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTT
T ss_pred CCccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccce
Confidence 3456899999999999996 9999999999999999999874 4678899999999988872 3 4
Q ss_pred cccCCC---cCCCcEEEEeeeCC
Q 024103 192 LVRGSW---LKPGAVVLDVGTCP 211 (272)
Q Consensus 192 ~i~~~~---vk~g~vviDig~~~ 211 (272)
+|+++. +|+|+++|+++--.
T Consensus 108 li~~~~l~~mk~ga~lvN~aRG~ 130 (178)
T PF02826_consen 108 LINAEFLAKMKPGAVLVNVARGE 130 (178)
T ss_dssp SBSHHHHHTSTTTEEEEESSSGG
T ss_pred eeeeeeeeccccceEEEeccchh
Confidence 677764 48899999998654
No 76
>PLN02928 oxidoreductase family protein
Probab=98.49 E-value=1.3e-06 Score=82.57 Aligned_cols=135 Identities=21% Similarity=0.266 Sum_probs=92.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------------CCHhhhcCCCcEEEEe
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------------KNPEQITSEADIVIAA 186 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------------------~~l~~~l~~ADIVIsa 186 (272)
.++.||++.|||.|.+ |+.++..|...|++|+.++++. .++.+.+++||+|+.+
T Consensus 155 ~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 155 DTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 4789999999999996 9999999999999999987641 2567899999999999
Q ss_pred cCC----CccccCCC---cCCCcEEEEeeeCCCCCC---CCCCCCCCceEec---ccchhh--------hhhhceEeccC
Q 024103 187 AGV----ANLVRGSW---LKPGAVVLDVGTCPVDVS---VDPSCEYGYRLMG---DVCYEE--------AMRLASVITPV 245 (272)
Q Consensus 187 ~g~----p~~i~~~~---vk~g~vviDig~~~~~~~---~~~~~~~~~k~~G---dvd~~~--------~~~~~~~~tpv 245 (272)
++. .++|+.+. +|+|+++|++|--..-++ .+.+. .+++.| ||-..+ ..-..-.+||=
T Consensus 234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~AL~~AL~--~g~i~gAaLDV~~~EP~~~~~pL~~~~nviiTPH 311 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYDAVLAALE--SGHLGGLAIDVAWSEPFDPDDPILKHPNVIITPH 311 (347)
T ss_pred CCCChHhhcccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHH--cCCeeEEEEccCCCCCCCCCChhhcCCCEEECCc
Confidence 873 34677664 488999999986553210 00111 234433 552111 11124477888
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHh
Q 024103 246 PGGVGPMTVAMLLSNTLDSAKRAY 269 (272)
Q Consensus 246 pGGvGp~T~amL~~n~v~a~~~~~ 269 (272)
.||.-.-+..-+...+++..++|+
T Consensus 312 ia~~t~~~~~~~~~~~~~nl~~~~ 335 (347)
T PLN02928 312 VAGVTEYSYRSMGKIVGDAALQLH 335 (347)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHH
Confidence 888766655555665666666554
No 77
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.48 E-value=4.2e-07 Score=87.72 Aligned_cols=93 Identities=27% Similarity=0.375 Sum_probs=75.1
Q ss_pred CHHHHHHH-HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEE
Q 024103 119 TPKGCIEL-LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVI 184 (272)
Q Consensus 119 Ta~g~~~~-l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVI 184 (272)
|.+++++. ++..++.+.|++|+|+|+|.+ |+.+++.+...|++|+++++.. ..+.+.++.+|+||
T Consensus 184 ~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI 262 (413)
T cd00401 184 CRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFV 262 (413)
T ss_pred hchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEE
Confidence 44555444 455688899999999999985 9999999999999999987653 13457788999999
Q ss_pred EecCCCccccC---CCcCCCcEEEEeeeCCC
Q 024103 185 AAAGVANLVRG---SWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 185 sa~g~p~~i~~---~~vk~g~vviDig~~~~ 212 (272)
+++|.++.++. +++++|.+++.+|..+.
T Consensus 263 ~atG~~~~i~~~~l~~mk~GgilvnvG~~~~ 293 (413)
T cd00401 263 TTTGNKDIITGEHFEQMKDGAIVCNIGHFDV 293 (413)
T ss_pred ECCCCHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 99999887754 45699999999997654
No 78
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=98.43 E-value=8.9e-07 Score=80.32 Aligned_cols=148 Identities=18% Similarity=0.259 Sum_probs=98.7
Q ss_pred CccEEEEcCCCCC-------CCCHHHHHhcCCcccc----cCccccc-----cccccccCC-------CCCccccCCHHH
Q 024103 66 SINGILVQLPLPQ-------HLDEGKILDAVSLEKD----VDGFHPL-----NIGNLAMRG-------REPLFIPCTPKG 122 (272)
Q Consensus 66 ~v~Gi~vq~Plp~-------~~~~~~i~~~i~p~KD----vdg~~~~-----n~g~l~~~~-------~~~~~~p~Ta~g 122 (272)
-+.|+++..||-+ +.-.++++++....++ |-|+.-. |+|+-..-. +--.+-.-|+++
T Consensus 70 vieg~l~~~pllpe~~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFssIVgn~~~n~q~~~~e~t~~~~ttgns~Taya 149 (351)
T COG5322 70 VIEGYLVESPLLPEMLRSRPKAATRRVLNAMALAQKLGADVTGLGGFSSIVGNLGQNVQVRNVELTFTRFTTGNSHTAYA 149 (351)
T ss_pred EEEEEEEccccCHHHHhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhhhhccccccccccceEEEEEecccCCccchHH
Confidence 4789999999865 1123456666655544 3333211 232211000 001122446666
Q ss_pred H----HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHh-hhc
Q 024103 123 C----IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPE-QIT 177 (272)
Q Consensus 123 ~----~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~--------------------~l~-~~l 177 (272)
+ .+.+++.|++++..+|.|+|+-|.+|.++++.|..+++...+.+|... ++. +++
T Consensus 150 a~r~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~ 229 (351)
T COG5322 150 ACRQVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALP 229 (351)
T ss_pred HHHHHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecccccc
Confidence 3 455667899999999999999999999999999999998888886521 122 334
Q ss_pred CCCcEEEEecCCCcc-ccCCCcCCCcEEEEeeeCCCC
Q 024103 178 SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPVD 213 (272)
Q Consensus 178 ~~ADIVIsa~g~p~~-i~~~~vk~g~vviDig~~~~~ 213 (272)
...++|.+|+-.++. |.+.++|||++|+|-|++.+-
T Consensus 230 ~e~i~v~vAs~~~g~~I~pq~lkpg~~ivD~g~P~dv 266 (351)
T COG5322 230 QEDILVWVASMPKGVEIFPQHLKPGCLIVDGGYPKDV 266 (351)
T ss_pred ccceEEEEeecCCCceechhhccCCeEEEcCCcCccc
Confidence 444455588877775 899999999999999998753
No 79
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.37 E-value=2.8e-06 Score=83.93 Aligned_cols=146 Identities=17% Similarity=0.255 Sum_probs=92.7
Q ss_pred HHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCccccccccccccCCCCCccccCC----HHHHHHHHHHhCC-
Q 024103 58 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCT----PKGCIELLIRSGV- 132 (272)
Q Consensus 58 i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~T----a~g~~~~l~~~~~- 132 (272)
++.|++ +.+++...+|.. + .++++++. +|.+..+..--.-++.+.+..+.+-+-. ..|+++....++.
T Consensus 79 ~~~l~~----g~tli~~l~p~~-n-~~ll~~l~-~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~~lgr~ 151 (511)
T TIGR00561 79 IAELPA----GKALVSFIWPAQ-N-PELMEKLA-AKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAHEFGRF 151 (511)
T ss_pred HHhcCC----CCEEEEEcCccC-C-HHHHHHHH-HcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHHHhhhh
Confidence 666666 356777777764 3 45666553 2223322111011121111112211110 1566777666553
Q ss_pred ---------CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------C----------------
Q 024103 133 ---------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------N---------------- 172 (272)
Q Consensus 133 ---------~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~---------------~---------------- 172 (272)
.+.+.+|+|+|+|.+ |..++..+...|+.|+++.++.. +
T Consensus 152 ~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s 230 (511)
T TIGR00561 152 FTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMS 230 (511)
T ss_pred cCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecC
Confidence 235689999999885 99999999999999999875520 0
Q ss_pred ----------HhhhcCCCcEEEEec---C--CCccccCCCc---CCCcEEEEeeeCC
Q 024103 173 ----------PEQITSEADIVIAAA---G--VANLVRGSWL---KPGAVVLDVGTCP 211 (272)
Q Consensus 173 ----------l~~~l~~ADIVIsa~---g--~p~~i~~~~v---k~g~vviDig~~~ 211 (272)
+.+.++.+||||+++ | .|.+++.+|+ |+|++|+|++..+
T Consensus 231 ~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 231 EEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence 345678999999999 5 4667888875 8899999999865
No 80
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=98.35 E-value=7.1e-07 Score=82.21 Aligned_cols=84 Identities=27% Similarity=0.408 Sum_probs=72.2
Q ss_pred HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEecCCCccccC
Q 024103 129 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVRG 195 (272)
Q Consensus 129 ~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa~g~p~~i~~ 195 (272)
....-+.||.++|.|+|. |||..++.|...|+.|+|..-.. ..+++.++++||+||+||.-+.|..
T Consensus 207 aTDvM~aGKv~Vv~GYGd-VGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~ 285 (434)
T KOG1370|consen 207 ATDVMIAGKVAVVCGYGD-VGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITG 285 (434)
T ss_pred hhhheecccEEEEeccCc-cchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhH
Confidence 345667999999999999 59999999999999999987653 3578999999999999999888877
Q ss_pred CCc---CCCcEEEEeeeCCCC
Q 024103 196 SWL---KPGAVVLDVGTCPVD 213 (272)
Q Consensus 196 ~~v---k~g~vviDig~~~~~ 213 (272)
++| |++++|+++|+.-.|
T Consensus 286 ~H~~~mk~d~IvCN~Ghfd~E 306 (434)
T KOG1370|consen 286 EHFDQMKNDAIVCNIGHFDTE 306 (434)
T ss_pred HHHHhCcCCcEEeccccccce
Confidence 765 779999999988654
No 81
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=98.27 E-value=1.5e-05 Score=76.38 Aligned_cols=144 Identities=19% Similarity=0.204 Sum_probs=98.0
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCcEEEEecCC-C------
Q 024103 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A------ 190 (272)
Q Consensus 127 l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------~~l~~~l~~ADIVIsa~g~-p------ 190 (272)
.++.+.++.||++.|||.|.+ |+.++..|...|++|..+++.. .++.+.+++||+|+..++- +
T Consensus 107 ~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~T 185 (381)
T PRK00257 107 AEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTKEGEHPT 185 (381)
T ss_pred hcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCCCccccc
Confidence 345678899999999999995 9999999999999999997531 2578889999999988772 2
Q ss_pred -ccccCC---CcCCCcEEEEeeeCCCCCC---CCCCCCC-CceEecccch------hhhhhhceEeccCCCcccHHHHHH
Q 024103 191 -NLVRGS---WLKPGAVVLDVGTCPVDVS---VDPSCEY-GYRLMGDVCY------EEAMRLASVITPVPGGVGPMTVAM 256 (272)
Q Consensus 191 -~~i~~~---~vk~g~vviDig~~~~~~~---~~~~~~~-~~k~~Gdvd~------~~~~~~~~~~tpvpGGvGp~T~am 256 (272)
++++.+ .+|+|+++|+++.-..-++ .+....+ -....=||=. ..+....-.+||=.+|...-+..-
T Consensus 186 ~~li~~~~l~~mk~gailIN~aRG~vVde~AL~~aL~~g~i~~a~LDV~e~EP~~~~~L~~~nvi~TPHiAg~s~e~~~r 265 (381)
T PRK00257 186 RHLLDEAFLASLRPGAWLINASRGAVVDNQALREALLSGEDLDAVLDVWEGEPQIDLELADLCTIATPHIAGYSLDGKAR 265 (381)
T ss_pred cccCCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCChhhhhCCEEEcCccccCCHHHHHH
Confidence 467655 4589999999987654210 0000000 0123335421 112334567888888887666666
Q ss_pred HHHHHHHHHHHHhCC
Q 024103 257 LLSNTLDSAKRAYGF 271 (272)
Q Consensus 257 L~~n~v~a~~~~~~~ 271 (272)
.....+++..+|++.
T Consensus 266 ~~~~~~~nl~~~~~~ 280 (381)
T PRK00257 266 GTAQIYQALCRFFGI 280 (381)
T ss_pred HHHHHHHHHHHHHcC
Confidence 666666666666664
No 82
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.25 E-value=1.3e-06 Score=80.72 Aligned_cols=118 Identities=31% Similarity=0.434 Sum_probs=82.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------CCHhhhcCCCcEEEEecC----
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAG---- 188 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------------------~~l~~~l~~ADIVIsa~g---- 188 (272)
+...+|+|||.|- ||.-.++++...||+|+|.+.+. .++++.++.||+||.|+=
T Consensus 166 V~~~kv~iiGGGv-vgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpga 244 (371)
T COG0686 166 VLPAKVVVLGGGV-VGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGA 244 (371)
T ss_pred CCCccEEEECCcc-ccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCC
Confidence 4567899999966 59999999999999999998652 256789999999998873
Q ss_pred -CCccccCCCc---CCCcEEEEeeeCCC---CCCCCCCCCC-C-ceEecccchhhhhhhceEeccCCCcccHHHHHHHHH
Q 024103 189 -VANLVRGSWL---KPGAVVLDVGTCPV---DVSVDPSCEY-G-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLS 259 (272)
Q Consensus 189 -~p~~i~~~~v---k~g~vviDig~~~~---~~~~~~~~~~-~-~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~ 259 (272)
.|.+++.+|+ |||+++||++++.- |+. .+++.. . ....|-++| ++.-.||-| |.|..+-+.
T Consensus 245 kaPkLvt~e~vk~MkpGsVivDVAiDqGGc~Et~-~~TTh~~PtY~~~gvvhY--------~VaNmPgaV-prTst~AL~ 314 (371)
T COG0686 245 KAPKLVTREMVKQMKPGSVIVDVAIDQGGCFETS-HPTTHDDPTYEVDGVVHY--------GVANMPGAV-PRTSTQALT 314 (371)
T ss_pred CCceehhHHHHHhcCCCcEEEEEEEcCCCceecc-ccccCCCCceeecCEEEE--------ecCCCCccc-cchhHHHhh
Confidence 4668888875 88999999999853 211 111110 0 111222222 222356555 889888887
Q ss_pred HHH
Q 024103 260 NTL 262 (272)
Q Consensus 260 n~v 262 (272)
|.-
T Consensus 315 nat 317 (371)
T COG0686 315 NAT 317 (371)
T ss_pred hcc
Confidence 763
No 83
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.21 E-value=4.1e-06 Score=73.23 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=66.9
Q ss_pred cCCHHHHHHHHH----Hh--CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH--------------hhh
Q 024103 117 PCTPKGCIELLI----RS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------------EQI 176 (272)
Q Consensus 117 p~Ta~g~~~~l~----~~--~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l--------------~~~ 176 (272)
|.|++|+...++ +. +.+++||+++|+|.|. +|+.+++.|.+.|++|++++++.+.+ .+.
T Consensus 3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~-vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l 81 (200)
T cd01075 3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGK-VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI 81 (200)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence 678888755544 33 7899999999999997 59999999999999999988764211 122
Q ss_pred c-CCCcEEEEecCCCccccCCCcCC--CcEEEEeeeCCC
Q 024103 177 T-SEADIVIAAAGVANLVRGSWLKP--GAVVLDVGTCPV 212 (272)
Q Consensus 177 l-~~ADIVIsa~g~p~~i~~~~vk~--g~vviDig~~~~ 212 (272)
. .++|+++.+... +.++.+.++. ..+|++-+-+|.
T Consensus 82 ~~~~~Dv~vp~A~~-~~I~~~~~~~l~~~~v~~~AN~~~ 119 (200)
T cd01075 82 YSVDADVFAPCALG-GVINDDTIPQLKAKAIAGAANNQL 119 (200)
T ss_pred ccccCCEEEecccc-cccCHHHHHHcCCCEEEECCcCcc
Confidence 2 379999955442 3555554422 457778776654
No 84
>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []. Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....
Probab=98.21 E-value=9.4e-07 Score=66.66 Aligned_cols=65 Identities=18% Similarity=0.288 Sum_probs=49.5
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCc-ccccC
Q 024103 27 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVD 96 (272)
Q Consensus 27 ~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p-~KDvd 96 (272)
..++++|+++|+++.|..++. +++++.+.++.++. +++.|++||+|+|+ +..++++.+++ .+-+.
T Consensus 13 ~~hn~~f~~~g~~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~~VT~P~K~--~~~~~~D~~~~~A~~ig 78 (83)
T PF08501_consen 13 LIHNAAFEALGLDAVYIPFEV--EPEDLEDFLDALRA-PNFRGLNVTMPHKE--AAIPYLDELSPSAKAIG 78 (83)
T ss_dssp HHHHHHHHHTTSSEEEEEEET--STTCHHHHHHHHHH-TTESEEEE-TTSTT--HHGGGSSEE-HHHHHHT
T ss_pred HHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHhc-CCCCeeeecchHHH--HHHHHhccCCHHHHHhC
Confidence 378999999999999999966 56788899999988 79999999999996 33444444444 44433
No 85
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=98.20 E-value=3.8e-06 Score=80.25 Aligned_cols=144 Identities=18% Similarity=0.209 Sum_probs=95.8
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCcEEEEecCC-C------
Q 024103 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A------ 190 (272)
Q Consensus 127 l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------~~l~~~l~~ADIVIsa~g~-p------ 190 (272)
.++.+.++.||++.|||.|.+ |+.++..|...|++|..+++.. .++.+.+++||||+..++- +
T Consensus 107 ~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T 185 (378)
T PRK15438 107 AERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGPYKT 185 (378)
T ss_pred hccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCccccc
Confidence 345678999999999999995 9999999999999999997421 2588999999999976662 1
Q ss_pred -ccccCC---CcCCCcEEEEeeeCCCCCC---CCCCCCC-CceEecccchh------hhhhhceEeccCCCcccHHHHHH
Q 024103 191 -NLVRGS---WLKPGAVVLDVGTCPVDVS---VDPSCEY-GYRLMGDVCYE------EAMRLASVITPVPGGVGPMTVAM 256 (272)
Q Consensus 191 -~~i~~~---~vk~g~vviDig~~~~~~~---~~~~~~~-~~k~~Gdvd~~------~~~~~~~~~tpvpGGvGp~T~am 256 (272)
++++.+ .+|+|+++|+++--..-++ .+....+ .....=||-.. .+.+....+||=.+|...=+...
T Consensus 186 ~~li~~~~l~~mk~gailIN~aRG~vVDe~AL~~aL~~g~~~ga~LDV~e~EP~~~~~Ll~~~~i~TPHiAg~s~e~~~~ 265 (378)
T PRK15438 186 LHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTPHIAGYTLEGKAR 265 (378)
T ss_pred ccccCHHHHhcCCCCcEEEECCCchhcCHHHHHHHHHhCCCcEEEEecCCCCCCCchhhhhcCCEECCccCcCcHHHHHH
Confidence 356654 4589999999997654210 0000000 01233455211 12233347899888887666655
Q ss_pred HHHHHHHHHHHHhCC
Q 024103 257 LLSNTLDSAKRAYGF 271 (272)
Q Consensus 257 L~~n~v~a~~~~~~~ 271 (272)
....++++..+++|.
T Consensus 266 ~~~~~~~~l~~~~~~ 280 (378)
T PRK15438 266 GTTQVFEAYSKFIGH 280 (378)
T ss_pred HHHHHHHHHHHHHcC
Confidence 555566666666653
No 86
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=98.16 E-value=5.1e-06 Score=77.78 Aligned_cols=91 Identities=16% Similarity=0.244 Sum_probs=69.4
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHH-hCC-CEEEEEeCCC---------------------CCH
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHH-ATVSIVHALT---------------------KNP 173 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~-~~g-a~V~v~~~~t---------------------~~l 173 (272)
.+.+.+++...... .-..++++|||+|+. |+..+..|. .++ .+|++++|+. .++
T Consensus 112 RTaa~~~laa~~la--~~~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~ 188 (326)
T TIGR02992 112 RTAAAGAVAARHLA--REDSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDP 188 (326)
T ss_pred HHHHHHHHHHHHhC--CCCCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCH
Confidence 33445555544211 235789999999997 999999887 466 4799999862 345
Q ss_pred hhhcCCCcEEEEecCCCc-cccCCCcCCCcEEEEeeeC
Q 024103 174 EQITSEADIVIAAAGVAN-LVRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 174 ~~~l~~ADIVIsa~g~p~-~i~~~~vk~g~vviDig~~ 210 (272)
++.+++||+||++|+.+. +++.+|+++|+.+..+|.+
T Consensus 189 ~~av~~aDiVvtaT~s~~p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 189 RAAMSGADIIVTTTPSETPILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred HHHhccCCEEEEecCCCCcEecHHHcCCCcEEEeeCCC
Confidence 667899999999999765 4789999999999999865
No 87
>PRK13243 glyoxylate reductase; Reviewed
Probab=98.16 E-value=4.7e-06 Score=78.34 Aligned_cols=136 Identities=16% Similarity=0.166 Sum_probs=89.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCcEEEEecCCC----ccccC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVRG 195 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t------------~~l~~~l~~ADIVIsa~g~p----~~i~~ 195 (272)
.++.||++.|||.|.+ |+.++..|...|++|.+++++. .++.+.+++||+|+.+++.. +++..
T Consensus 146 ~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~ 224 (333)
T PRK13243 146 YDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINE 224 (333)
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCH
Confidence 4689999999999886 9999999999999999998652 25678899999999998842 35654
Q ss_pred C---CcCCCcEEEEeeeCCCCCCCCCCCC--CCceEec---ccchhh------h-hhhceEeccCCCcccHHHHHHHHHH
Q 024103 196 S---WLKPGAVVLDVGTCPVDVSVDPSCE--YGYRLMG---DVCYEE------A-MRLASVITPVPGGVGPMTVAMLLSN 260 (272)
Q Consensus 196 ~---~vk~g~vviDig~~~~~~~~~~~~~--~~~k~~G---dvd~~~------~-~~~~~~~tpvpGGvGp~T~amL~~n 260 (272)
+ .+|+|+++||++.-..-++ +.... ..+++-| ||-..+ + .-..-.+||=.||.-.-+..-+...
T Consensus 225 ~~~~~mk~ga~lIN~aRg~~vd~-~aL~~aL~~g~i~gAaLDV~~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~ 303 (333)
T PRK13243 225 ERLKLMKPTAILVNTARGKVVDT-KALVKALKEGWIAGAGLDVFEEEPYYNEELFSLKNVVLAPHIGSATFEAREGMAEL 303 (333)
T ss_pred HHHhcCCCCeEEEECcCchhcCH-HHHHHHHHcCCeEEEEeccCCCCCCCCchhhcCCCEEECCcCCcCHHHHHHHHHHH
Confidence 4 4689999999987654210 00000 1234433 442111 1 1124467787777665444444444
Q ss_pred HHHHHHHHh
Q 024103 261 TLDSAKRAY 269 (272)
Q Consensus 261 ~v~a~~~~~ 269 (272)
+++..++|+
T Consensus 304 ~~~ni~~~~ 312 (333)
T PRK13243 304 VAENLIAFK 312 (333)
T ss_pred HHHHHHHHH
Confidence 444444443
No 88
>PRK06932 glycerate dehydrogenase; Provisional
Probab=98.13 E-value=4.3e-06 Score=78.00 Aligned_cols=135 Identities=21% Similarity=0.242 Sum_probs=91.8
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------CCHhhhcCCCcEEEEecCC-C---ccccCCC--
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------KNPEQITSEADIVIAAAGV-A---NLVRGSW-- 197 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------~~l~~~l~~ADIVIsa~g~-p---~~i~~~~-- 197 (272)
.++.||++.|||.|.+ |+.++.+|...|++|...++.. .++.+.+++||+|+...+. | ++|+.+.
T Consensus 143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~ 221 (314)
T PRK06932 143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLA 221 (314)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHH
Confidence 3689999999999996 9999999999999998876542 2578999999999988873 2 4677664
Q ss_pred -cCCCcEEEEeeeCCCCCC---CCCCCCCCceE---ecccchhh-------hh-----hhceEeccCCCcccHHHHHHHH
Q 024103 198 -LKPGAVVLDVGTCPVDVS---VDPSCEYGYRL---MGDVCYEE-------AM-----RLASVITPVPGGVGPMTVAMLL 258 (272)
Q Consensus 198 -vk~g~vviDig~~~~~~~---~~~~~~~~~k~---~Gdvd~~~-------~~-----~~~~~~tpvpGGvGp~T~amL~ 258 (272)
+|+|+++|+++--..-+. .+.+. .+++ .-||-..+ +. -..-.+||=.||.-.-+..-+.
T Consensus 222 ~mk~ga~lIN~aRG~~Vde~AL~~aL~--~g~i~gAaLDV~~~EP~~~~~pl~~~~~~~pnvilTPHia~~t~e~~~~~~ 299 (314)
T PRK06932 222 LMKPTAFLINTGRGPLVDEQALLDALE--NGKIAGAALDVLVKEPPEKDNPLIQAAKRLPNLLITPHIAWASDSAVTTLV 299 (314)
T ss_pred hCCCCeEEEECCCccccCHHHHHHHHH--cCCccEEEEecCCCCCCCCCChhhHhhcCCCCEEECCccccCcHHHHHHHH
Confidence 589999999987654210 00110 1233 33542111 11 1235678888887766666666
Q ss_pred HHHHHHHHHHh
Q 024103 259 SNTLDSAKRAY 269 (272)
Q Consensus 259 ~n~v~a~~~~~ 269 (272)
..+++..++++
T Consensus 300 ~~~~~ni~~~~ 310 (314)
T PRK06932 300 NKVAQNIEEFV 310 (314)
T ss_pred HHHHHHHHHHH
Confidence 66666666554
No 89
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=98.12 E-value=6e-06 Score=76.93 Aligned_cols=135 Identities=23% Similarity=0.209 Sum_probs=90.8
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCcEEEEecCC-C---ccccCC--
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A---NLVRGS-- 196 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------~~l~~~l~~ADIVIsa~g~-p---~~i~~~-- 196 (272)
.++.||++.|||.|.+ |+.+|.+|..-|++|..++++. .++.+.+++||+|+..++. | ++|+.+
T Consensus 141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~ 219 (311)
T PRK08410 141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKEL 219 (311)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHH
Confidence 4689999999999996 9999999999999999888642 2578999999999988873 2 467666
Q ss_pred -CcCCCcEEEEeeeCCCCCC---CCCCCCCCceE--ecccchhh-------hhh----hceEeccCCCcccHHHHHHHHH
Q 024103 197 -WLKPGAVVLDVGTCPVDVS---VDPSCEYGYRL--MGDVCYEE-------AMR----LASVITPVPGGVGPMTVAMLLS 259 (272)
Q Consensus 197 -~vk~g~vviDig~~~~~~~---~~~~~~~~~k~--~Gdvd~~~-------~~~----~~~~~tpvpGGvGp~T~amL~~ 259 (272)
.+|+|+++|+++--..-++ .+.+. .+++ .=||-..+ +.. -.-.+||=.||.-.-+..-+..
T Consensus 220 ~~Mk~~a~lIN~aRG~vVDe~AL~~AL~--~g~i~AaLDV~~~EP~~~~~pL~~~~~~~NvilTPH~a~~t~e~~~~~~~ 297 (311)
T PRK08410 220 KLLKDGAILINVGRGGIVNEKDLAKALD--EKDIYAGLDVLEKEPMEKNHPLLSIKNKEKLLITPHIAWASKEARKTLIE 297 (311)
T ss_pred HhCCCCeEEEECCCccccCHHHHHHHHH--cCCeEEEEecCCCCCCCCCChhhccCCCCCEEECCccccCCHHHHHHHHH
Confidence 4599999999987654210 01111 1333 34552111 111 1356788778876655555555
Q ss_pred HHHHHHHHHh
Q 024103 260 NTLDSAKRAY 269 (272)
Q Consensus 260 n~v~a~~~~~ 269 (272)
.+++..++|+
T Consensus 298 ~~~~nl~~~~ 307 (311)
T PRK08410 298 KVKENIKDFL 307 (311)
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 90
>PRK06487 glycerate dehydrogenase; Provisional
Probab=98.12 E-value=5.3e-06 Score=77.49 Aligned_cols=135 Identities=17% Similarity=0.195 Sum_probs=91.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------CCHhhhcCCCcEEEEecCC----CccccCCC---
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------KNPEQITSEADIVIAAAGV----ANLVRGSW--- 197 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------~~l~~~l~~ADIVIsa~g~----p~~i~~~~--- 197 (272)
.++.||++.|||.|.+ |+.++.+|...|++|...++.. .+|.+.+++||+|+...+. .++|+.+.
T Consensus 144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~ 222 (317)
T PRK06487 144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELAL 222 (317)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhc
Confidence 3689999999999996 9999999999999998877542 2578999999999988873 34677664
Q ss_pred cCCCcEEEEeeeCCCCCC---CCCCCCCCceEe---cccchhh-------hh---hhceEeccCCCcccHHHHHHHHHHH
Q 024103 198 LKPGAVVLDVGTCPVDVS---VDPSCEYGYRLM---GDVCYEE-------AM---RLASVITPVPGGVGPMTVAMLLSNT 261 (272)
Q Consensus 198 vk~g~vviDig~~~~~~~---~~~~~~~~~k~~---Gdvd~~~-------~~---~~~~~~tpvpGGvGp~T~amL~~n~ 261 (272)
+|+|+++|++|--..-++ .+.+. .+++. =||-..+ +- -..-.+||=.+|...-+..-+...+
T Consensus 223 mk~ga~lIN~aRG~vVde~AL~~AL~--~g~i~gAaLDVf~~EP~~~~~pl~~~~~pnvilTPHia~~t~e~~~~~~~~~ 300 (317)
T PRK06487 223 MKPGALLINTARGGLVDEQALADALR--SGHLGGAATDVLSVEPPVNGNPLLAPDIPRLIVTPHSAWGSREARQRIVGQL 300 (317)
T ss_pred CCCCeEEEECCCccccCHHHHHHHHH--cCCeeEEEeecCCCCCCCCCCchhhcCCCCEEECCccccCCHHHHHHHHHHH
Confidence 589999999997654210 00111 13332 3442111 11 1234678877887766666666656
Q ss_pred HHHHHHHh
Q 024103 262 LDSAKRAY 269 (272)
Q Consensus 262 v~a~~~~~ 269 (272)
++..++|+
T Consensus 301 ~~ni~~~~ 308 (317)
T PRK06487 301 AENARAFF 308 (317)
T ss_pred HHHHHHHH
Confidence 66555554
No 91
>PRK06436 glycerate dehydrogenase; Provisional
Probab=98.10 E-value=6.4e-06 Score=76.54 Aligned_cols=80 Identities=18% Similarity=0.326 Sum_probs=66.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCcEEEEecCC-C---ccccCC--
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A---NLVRGS-- 196 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------~~l~~~l~~ADIVIsa~g~-p---~~i~~~-- 196 (272)
.++.||++.|||.|.+ |++++.+|...|++|..++++. .++++.+++||+|+...+. | +++..+
T Consensus 118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l 196 (303)
T PRK06436 118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML 196 (303)
T ss_pred CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence 4789999999999986 9999999999999999998752 3678889999999998883 2 356544
Q ss_pred -CcCCCcEEEEeeeCCC
Q 024103 197 -WLKPGAVVLDVGTCPV 212 (272)
Q Consensus 197 -~vk~g~vviDig~~~~ 212 (272)
.+|+|+++|+++.-..
T Consensus 197 ~~mk~ga~lIN~sRG~~ 213 (303)
T PRK06436 197 SLFRKGLAIINVARADV 213 (303)
T ss_pred hcCCCCeEEEECCCccc
Confidence 4589999999997654
No 92
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=98.10 E-value=3.2e-05 Score=72.52 Aligned_cols=136 Identities=17% Similarity=0.200 Sum_probs=90.9
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHH-hCCCEEEEEeCCC------------CCHhhhcCCCcEEEEecCC-C---ccc
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLV 193 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~-~~ga~V~v~~~~t------------~~l~~~l~~ADIVIsa~g~-p---~~i 193 (272)
+.++.||++.|||.|.+ |+.++..|. ..|++|...++.. .++.+.+++||+|+...+. | ++|
T Consensus 140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF 218 (323)
T ss_pred cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence 45789999999999996 999999997 8899998776542 2578899999999988873 3 467
Q ss_pred cCCC---cCCCcEEEEeeeCCCCCC---CCCCCCCCceEec---ccchhh-------hhh-hceEeccCCCcccHHHHHH
Q 024103 194 RGSW---LKPGAVVLDVGTCPVDVS---VDPSCEYGYRLMG---DVCYEE-------AMR-LASVITPVPGGVGPMTVAM 256 (272)
Q Consensus 194 ~~~~---vk~g~vviDig~~~~~~~---~~~~~~~~~k~~G---dvd~~~-------~~~-~~~~~tpvpGGvGp~T~am 256 (272)
..+. +|+|+++|+++--..-+. .+.+. .+++.| ||-..+ +.+ ..-.+||=.||.-.=+..-
T Consensus 219 ~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~--~g~i~gAaLDVf~~EP~~~~~pL~~~~nvilTPHia~~t~e~~~~ 296 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAGRGPVVDENALIAALQ--KGEIHAAGLDVFEQEPLSVDSPLLSLPNVVAVPHIGSATHETRYN 296 (323)
T ss_pred CHHHHhcCCCCeEEEECCCccccCHHHHHHHHH--cCCeeEEEeecCCCCCCCCCchhhcCCCEEEcCcCCCCcHHHHHH
Confidence 6654 589999999987654210 01111 234433 442211 111 2446788788876555555
Q ss_pred HHHHHHHHHHHHh
Q 024103 257 LLSNTLDSAKRAY 269 (272)
Q Consensus 257 L~~n~v~a~~~~~ 269 (272)
+....++...+|+
T Consensus 297 ~~~~~~~ni~~~~ 309 (323)
T PRK15409 297 MAACAVDNLIDAL 309 (323)
T ss_pred HHHHHHHHHHHHH
Confidence 5555566555554
No 93
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=98.09 E-value=6.4e-06 Score=72.19 Aligned_cols=113 Identities=19% Similarity=0.286 Sum_probs=73.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCH-----------------hhhcCCCcEEEEecCCCcc-
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVANL- 192 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-~~l-----------------~~~l~~ADIVIsa~g~p~~- 192 (272)
++++||+|+|||+|.+ |...+..|...|+.|++++++. +.+ .+.+..+|+||+||+.+.+
T Consensus 6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHH
Confidence 5789999999999985 9999999999999999997652 111 3457889999999998763
Q ss_pred --ccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhh---hceEeccCCCcccHHHHHHHHHHHHH
Q 024103 193 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMR---LASVITPVPGGVGPMTVAMLLSNTLD 263 (272)
Q Consensus 193 --i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~---~~~~~tpvpGGvGp~T~amL~~n~v~ 263 (272)
+.... +.+. .+++.-+|.. +|+-+.++.+ ..-.++ -||-+|..+..|-+++-.
T Consensus 85 ~~i~~~a-~~~~-lvn~~d~~~~--------------~~f~~Pa~~~~g~l~iaIs--T~G~sP~la~~lr~~ie~ 142 (202)
T PRK06718 85 EQVKEDL-PENA-LFNVITDAES--------------GNVVFPSALHRGKLTISVS--TDGASPKLAKKIRDELEA 142 (202)
T ss_pred HHHHHHH-HhCC-cEEECCCCcc--------------CeEEEeeEEEcCCeEEEEE--CCCCChHHHHHHHHHHHH
Confidence 43222 3443 4455434322 2222222111 122333 478899888776555543
No 94
>PRK07574 formate dehydrogenase; Provisional
Probab=98.08 E-value=7.3e-06 Score=78.57 Aligned_cols=135 Identities=16% Similarity=0.192 Sum_probs=91.8
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCC-C---ccc
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV-A---NLV 193 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~-p---~~i 193 (272)
.++.||+|.|||.|.+ |+.++..|...|++|..++++. .++++.+++||+|+...+. | +++
T Consensus 188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 266 (385)
T PRK07574 188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF 266 (385)
T ss_pred eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence 4689999999999996 9999999999999999998753 3577889999999999883 3 356
Q ss_pred cCC---CcCCCcEEEEeeeCCCCCC---CCCCCCCCce---Eecccchhh--------hhhhceEeccCCCcccHHHHHH
Q 024103 194 RGS---WLKPGAVVLDVGTCPVDVS---VDPSCEYGYR---LMGDVCYEE--------AMRLASVITPVPGGVGPMTVAM 256 (272)
Q Consensus 194 ~~~---~vk~g~vviDig~~~~~~~---~~~~~~~~~k---~~Gdvd~~~--------~~~~~~~~tpvpGGvGp~T~am 256 (272)
+.+ .+|+|+++|+++.-..-+. .+... .++ ...||-+.+ ..-..-.+||=.+|.-.-+..-
T Consensus 267 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~--sG~i~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~T~e~~~~ 344 (385)
T PRK07574 267 DADVLSRMKRGSYLVNTARGKIVDRDAVVRALE--SGHLAGYAGDVWFPQPAPADHPWRTMPRNGMTPHISGTTLSAQAR 344 (385)
T ss_pred CHHHHhcCCCCcEEEECCCCchhhHHHHHHHHH--hCCccEEEEecCCCCCCCCCChHHhCCCeEECCccccCcHHHHHH
Confidence 655 4589999999987653210 00010 122 345663221 0112446788888876655555
Q ss_pred HHHHHHHHHHHHh
Q 024103 257 LLSNTLDSAKRAY 269 (272)
Q Consensus 257 L~~n~v~a~~~~~ 269 (272)
+...+++..++|+
T Consensus 345 ~~~~~~~ni~~~~ 357 (385)
T PRK07574 345 YAAGTREILECFF 357 (385)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555555554
No 95
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=98.05 E-value=9.8e-06 Score=75.60 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=65.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCcEEEEecCC-C---ccccC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLVRG 195 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t------------~~l~~~l~~ADIVIsa~g~-p---~~i~~ 195 (272)
.+++||++.|||.|.+ |+.++..|...|++|+..+++. .++.+.+++||+|+...+. | +++..
T Consensus 132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~ 210 (312)
T PRK15469 132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIINQ 210 (312)
T ss_pred CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhHH
Confidence 4689999999999996 9999999999999999887643 2577889999999998884 2 24554
Q ss_pred C---CcCCCcEEEEeeeCCC
Q 024103 196 S---WLKPGAVVLDVGTCPV 212 (272)
Q Consensus 196 ~---~vk~g~vviDig~~~~ 212 (272)
+ .+|+|+++|++|--..
T Consensus 211 ~~l~~mk~ga~lIN~aRG~v 230 (312)
T PRK15469 211 QLLEQLPDGAYLLNLARGVH 230 (312)
T ss_pred HHHhcCCCCcEEEECCCccc
Confidence 4 4588999999997654
No 96
>PRK08291 ectoine utilization protein EutC; Validated
Probab=98.04 E-value=1.7e-05 Score=74.44 Aligned_cols=91 Identities=18% Similarity=0.262 Sum_probs=69.7
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh-CC-CEEEEEeCCC---------------------CCH
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT---------------------KNP 173 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~-~g-a~V~v~~~~t---------------------~~l 173 (272)
.+.+.+++...... .-..++++|||+|+. |+..+..|.. ++ .+|++++|+. .++
T Consensus 115 rT~a~~~~a~~~la--~~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~ 191 (330)
T PRK08291 115 RTAAAGAVAARHLA--REDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDV 191 (330)
T ss_pred HHHHHHHHHHHHhC--CCCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCH
Confidence 44456666665321 335689999999997 9998888774 55 5899998862 345
Q ss_pred hhhcCCCcEEEEecCCCc-cccCCCcCCCcEEEEeeeC
Q 024103 174 EQITSEADIVIAAAGVAN-LVRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 174 ~~~l~~ADIVIsa~g~p~-~i~~~~vk~g~vviDig~~ 210 (272)
++.+++||+||++|+... +++.+|+++|+.|..+|.+
T Consensus 192 ~~al~~aDiVi~aT~s~~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 192 HEAVAGADIIVTTTPSEEPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred HHHHccCCEEEEeeCCCCcEecHHHcCCCceEEeeCCC
Confidence 677899999999999765 4788999999999998875
No 97
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=98.03 E-value=1.1e-05 Score=75.78 Aligned_cols=137 Identities=22% Similarity=0.282 Sum_probs=93.2
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEecCC----Ccc
Q 024103 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANL 192 (272)
Q Consensus 130 ~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa~g~----p~~ 192 (272)
.+.++.||++-|||.|.+ |+.++..|...|++|..+++.. .+|.+.+++||+|+.-++. -++
T Consensus 136 ~g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~ 214 (324)
T COG0111 136 RGTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGL 214 (324)
T ss_pred ccccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcc
Confidence 356888999999999996 9999999999999999998842 3588999999999988873 246
Q ss_pred ccCCC---cCCCcEEEEeeeCCCCCC---CCCCCCCCceEec---ccchhh-------hhh-hceEeccCCCcccHHHHH
Q 024103 193 VRGSW---LKPGAVVLDVGTCPVDVS---VDPSCEYGYRLMG---DVCYEE-------AMR-LASVITPVPGGVGPMTVA 255 (272)
Q Consensus 193 i~~~~---vk~g~vviDig~~~~~~~---~~~~~~~~~k~~G---dvd~~~-------~~~-~~~~~tpvpGGvGp~T~a 255 (272)
++.+. +|+|+++|+++--..-+. .+... .|++-| ||-..+ +-. -.-.+||=.||..--+..
T Consensus 215 i~~~~~a~MK~gailIN~aRG~vVde~aL~~AL~--~G~i~gA~lDVf~~EPl~~~~pL~~~pnV~~TPHia~~T~ea~~ 292 (324)
T COG0111 215 INAEELAKMKPGAILINAARGGVVDEDALLAALD--SGKIAGAALDVFEEEPLPADSPLWDLPNVILTPHIGGSTDEAQE 292 (324)
T ss_pred cCHHHHhhCCCCeEEEECCCcceecHHHHHHHHH--cCCcceEEecCCCCCCCCCCChhhcCCCeEECCcccccCHHHHH
Confidence 76654 589999999986653110 00000 122221 332111 111 134568888888766666
Q ss_pred HHHHHHHHHHHHHh
Q 024103 256 MLLSNTLDSAKRAY 269 (272)
Q Consensus 256 mL~~n~v~a~~~~~ 269 (272)
.+...+++...+++
T Consensus 293 ~~~~~~~~~i~~~l 306 (324)
T COG0111 293 RVAEIVAENIVRYL 306 (324)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666666666554
No 98
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=98.03 E-value=9.6e-06 Score=76.19 Aligned_cols=80 Identities=20% Similarity=0.320 Sum_probs=65.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------CCHhhhcCCCcEEEEecCCC----ccccCC-
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGVA----NLVRGS- 196 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t----------~~l~~~l~~ADIVIsa~g~p----~~i~~~- 196 (272)
.++.|+++.|||.|.+ |++++.+|...|++|+.++++. .++.+.+++||+|+.+++.. +++..+
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~ 220 (330)
T PRK12480 142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAM 220 (330)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHH
Confidence 4689999999999986 9999999999999999998653 36788999999999999853 245433
Q ss_pred --CcCCCcEEEEeeeCCC
Q 024103 197 --WLKPGAVVLDVGTCPV 212 (272)
Q Consensus 197 --~vk~g~vviDig~~~~ 212 (272)
.+++|+++|+++--..
T Consensus 221 l~~mk~gavlIN~aRG~~ 238 (330)
T PRK12480 221 FDHVKKGAILVNAARGAV 238 (330)
T ss_pred HhcCCCCcEEEEcCCccc
Confidence 4588999999986654
No 99
>PLN02306 hydroxypyruvate reductase
Probab=97.99 E-value=1.3e-05 Score=76.96 Aligned_cols=80 Identities=20% Similarity=0.290 Sum_probs=64.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHH-hCCCEEEEEeCCC----------------------------CCHhhhcCCCcE
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALT----------------------------KNPEQITSEADI 182 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~-~~ga~V~v~~~~t----------------------------~~l~~~l~~ADI 182 (272)
.++.||++.|||.|.+ |+.++.+|. ..|++|...+++. .+|.+.+++||+
T Consensus 161 ~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDi 239 (386)
T PLN02306 161 NLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADV 239 (386)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCE
Confidence 4689999999999996 999999985 8899998876431 367889999999
Q ss_pred EEEecCC----CccccCCC---cCCCcEEEEeeeCCC
Q 024103 183 VIAAAGV----ANLVRGSW---LKPGAVVLDVGTCPV 212 (272)
Q Consensus 183 VIsa~g~----p~~i~~~~---vk~g~vviDig~~~~ 212 (272)
|+..++. .++|+.+. +|+|+++|+++--..
T Consensus 240 V~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~l 276 (386)
T PLN02306 240 ISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPV 276 (386)
T ss_pred EEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccc
Confidence 9988773 24677664 589999999996543
No 100
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.99 E-value=1.7e-05 Score=74.49 Aligned_cols=80 Identities=23% Similarity=0.299 Sum_probs=64.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHH-HhCCCEEEEEeCCC-----------CCHhhhcCCCcEEEEecCCC----ccccC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLL-QRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVA----NLVRG 195 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L-~~~ga~V~v~~~~t-----------~~l~~~l~~ADIVIsa~g~p----~~i~~ 195 (272)
.++.|++|.|||.|.+ |+.++.+| ...|++|+..+++. .++.+.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~~ 220 (332)
T PRK08605 142 RSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFNA 220 (332)
T ss_pred ceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcCH
Confidence 4689999999999885 99999999 56788999887642 36788999999999998742 34543
Q ss_pred ---CCcCCCcEEEEeeeCCC
Q 024103 196 ---SWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 196 ---~~vk~g~vviDig~~~~ 212 (272)
+.+++|+++||++.-..
T Consensus 221 ~~l~~mk~gailIN~sRG~~ 240 (332)
T PRK08605 221 DLFKHFKKGAVFVNCARGSL 240 (332)
T ss_pred HHHhcCCCCcEEEECCCCcc
Confidence 45689999999987654
No 101
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.97 E-value=3.7e-05 Score=71.97 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=61.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHH-hCCC-EEEEEeCCC---------------------CCHhhhcCCCcEEEEecCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQ-RHHA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~-~~ga-~V~v~~~~t---------------------~~l~~~l~~ADIVIsa~g~p 190 (272)
...++++|||.|+. |+..+..+. .+++ +|.+++|+. .++++.+++||+||++|+.+
T Consensus 125 ~~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~ 203 (325)
T PRK08618 125 EDAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAK 203 (325)
T ss_pred CCCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCC
Confidence 36789999999997 998887665 4564 799998762 24567789999999999987
Q ss_pred cc-ccCCCcCCCcEEEEeeeCC
Q 024103 191 NL-VRGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 191 ~~-i~~~~vk~g~vviDig~~~ 211 (272)
+. ++ +|+++|+.|+-+|.+.
T Consensus 204 ~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 204 TPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred CcchH-HhcCCCcEEEecCCCC
Confidence 75 78 9999999999998753
No 102
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.94 E-value=2.3e-05 Score=77.54 Aligned_cols=90 Identities=23% Similarity=0.315 Sum_probs=67.7
Q ss_pred HHHHHHHHHhCC----------CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------
Q 024103 121 KGCIELLIRSGV----------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------- 171 (272)
Q Consensus 121 ~g~~~~l~~~~~----------~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~------------------- 171 (272)
.|+++....++. ...+.+|+|+|+|.+ |..++..+...||.|++++++..
T Consensus 140 ~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e 218 (509)
T PRK09424 140 RAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEE 218 (509)
T ss_pred HHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEecccc
Confidence 667777766653 246999999999885 99999999999999988875420
Q ss_pred --------------C--------HhhhcCCCcEEEEecCCCc-----cccCCC---cCCCcEEEEeeeCC
Q 024103 172 --------------N--------PEQITSEADIVIAAAGVAN-----LVRGSW---LKPGAVVLDVGTCP 211 (272)
Q Consensus 172 --------------~--------l~~~l~~ADIVIsa~g~p~-----~i~~~~---vk~g~vviDig~~~ 211 (272)
+ +.+.++.+|+||+++|.|. +++.++ +++|.+|+|+|.++
T Consensus 219 ~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~ 288 (509)
T PRK09424 219 EGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAEN 288 (509)
T ss_pred ccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCC
Confidence 0 0112357999999999754 555655 48999999999864
No 103
>PLN03139 formate dehydrogenase; Provisional
Probab=97.92 E-value=2e-05 Score=75.51 Aligned_cols=135 Identities=16% Similarity=0.236 Sum_probs=92.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCC----ccc
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVA----NLV 193 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p----~~i 193 (272)
.++.||++.|||.|.+ |+.++..|...|++|..++++. .++++.+++||+|+...+.. +++
T Consensus 195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li 273 (386)
T PLN03139 195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF 273 (386)
T ss_pred cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence 4689999999999996 9999999999999999888642 26788999999999888742 356
Q ss_pred cCC---CcCCCcEEEEeeeCCCCCC---CCCCCCCCce---Eecccchhh-h-------hhhceEeccCCCcccHHHHHH
Q 024103 194 RGS---WLKPGAVVLDVGTCPVDVS---VDPSCEYGYR---LMGDVCYEE-A-------MRLASVITPVPGGVGPMTVAM 256 (272)
Q Consensus 194 ~~~---~vk~g~vviDig~~~~~~~---~~~~~~~~~k---~~Gdvd~~~-~-------~~~~~~~tpvpGGvGp~T~am 256 (272)
+++ .+|+|+++|+++--..-+. .+... .++ ...||-+.+ . .-..-.+||=.+|.-.-+..-
T Consensus 274 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~--sG~l~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~t~~~~~r 351 (386)
T PLN03139 274 NKERIAKMKKGVLIVNNARGAIMDTQAVADACS--SGHIGGYGGDVWYPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLR 351 (386)
T ss_pred CHHHHhhCCCCeEEEECCCCchhhHHHHHHHHH--cCCceEEEEcCCCCCCCCCCChhhcCCCeEEcccccccCHHHHHH
Confidence 655 4589999999987654210 00000 123 345764322 0 012457788778876655555
Q ss_pred HHHHHHHHHHHHh
Q 024103 257 LLSNTLDSAKRAY 269 (272)
Q Consensus 257 L~~n~v~a~~~~~ 269 (272)
+...+++..++|+
T Consensus 352 ~~~~~~~nl~~~~ 364 (386)
T PLN03139 352 YAAGVKDMLDRYF 364 (386)
T ss_pred HHHHHHHHHHHHH
Confidence 5555566666654
No 104
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.91 E-value=6.5e-06 Score=69.78 Aligned_cols=78 Identities=26% Similarity=0.332 Sum_probs=57.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------------------CC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------------KN 172 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t----------------------------------------~~ 172 (272)
.+...+|+|+|+|. ||+.++..|...|++|++.+... ..
T Consensus 17 ~~~p~~vvv~G~G~-vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 17 GVPPAKVVVTGAGR-VGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp EE-T-EEEEESTSH-HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred CCCCeEEEEECCCH-HHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 35678999999988 59999999999999999997541 12
Q ss_pred HhhhcCCCcEEEEecC-----CCccccCCCc---CCCcEEEEeeeCC
Q 024103 173 PEQITSEADIVIAAAG-----VANLVRGSWL---KPGAVVLDVGTCP 211 (272)
Q Consensus 173 l~~~l~~ADIVIsa~g-----~p~~i~~~~v---k~g~vviDig~~~ 211 (272)
+.+.++.+|+||++.- .|.+++.+|+ +++++|+|+..+.
T Consensus 96 f~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 96 FAEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 4577899999996552 4668888875 7899999998763
No 105
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.89 E-value=2.4e-05 Score=75.60 Aligned_cols=80 Identities=21% Similarity=0.360 Sum_probs=66.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------CCHhhhcCCCcEEEEecCC-C---ccccCC
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV-A---NLVRGS 196 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t----------~~l~~~l~~ADIVIsa~g~-p---~~i~~~ 196 (272)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++++.+++||+|+...+. + ++++.+
T Consensus 146 ~~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~ 224 (409)
T PRK11790 146 SFEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAE 224 (409)
T ss_pred cccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHH
Confidence 35789999999999996 9999999999999999987642 2688999999999988873 2 367665
Q ss_pred ---CcCCCcEEEEeeeCC
Q 024103 197 ---WLKPGAVVLDVGTCP 211 (272)
Q Consensus 197 ---~vk~g~vviDig~~~ 211 (272)
.+|+|+++|+++--.
T Consensus 225 ~l~~mk~ga~lIN~aRG~ 242 (409)
T PRK11790 225 ELALMKPGAILINASRGT 242 (409)
T ss_pred HHhcCCCCeEEEECCCCc
Confidence 458999999999544
No 106
>PRK12862 malic enzyme; Reviewed
Probab=97.86 E-value=7.4e-05 Score=77.30 Aligned_cols=169 Identities=14% Similarity=0.175 Sum_probs=120.1
Q ss_pred HHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcccccccc
Q 024103 26 VRNKIKACEEV-GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (272)
Q Consensus 26 ~~~~~~~~~~~-Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~~~n~g 104 (272)
...|.-.++.+ ||++.-+++... +.+|+.+.++.+- |++.||++.== ..-+--++++.+...-|+--||
T Consensus 97 ~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~ED~--~~~~~f~i~~~~~~~~~ip~f~----- 166 (763)
T PRK12862 97 MEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINLEDI--KAPECFYIERELRERMKIPVFH----- 166 (763)
T ss_pred HHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeeeecc--cCchHHHHHHHHHhcCCCceEe-----
Confidence 34566666665 588777777644 6899999999887 78889887311 0112233444443333333332
Q ss_pred ccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC-----------
Q 024103 105 NLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT----------- 170 (272)
Q Consensus 105 ~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga---~V~v~~~~t----------- 170 (272)
++..+---.+..|++..++-.+.+++.-++++.|+|.+ |-.++.+|...|. .+++|+++-
T Consensus 167 -----DD~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~l~ 240 (763)
T PRK12862 167 -----DDQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRTELMD 240 (763)
T ss_pred -----cCcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCcccc
Confidence 12333223455778999999999999999999999998 9999999999997 689998541
Q ss_pred ------------CCHhhhcCCCcEEEEecCCCccccCCCcCC---CcEEEEeeeCCC
Q 024103 171 ------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 212 (272)
Q Consensus 171 ------------~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~---g~vviDig~~~~ 212 (272)
.+|.+.++.+|++|-..+ |+.++++|++. .-+|+=+. ||.
T Consensus 241 ~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 295 (763)
T PRK12862 241 PWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALA-NPT 295 (763)
T ss_pred HHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCC-CCc
Confidence 357899999999997777 89999999854 66777776 543
No 107
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.84 E-value=0.00013 Score=75.17 Aligned_cols=169 Identities=15% Similarity=0.176 Sum_probs=119.4
Q ss_pred HHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcccccccc
Q 024103 26 VRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (272)
Q Consensus 26 ~~~~~~~~~~~G-i~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~~~n~g 104 (272)
...|.-.++.+| |++.-+.+... +.+|+.+.++.+- |++.||++.==-.+ +--++++.+...-|+--+|.
T Consensus 89 ~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~ED~~~p--~~f~i~~~~~~~~~ip~f~D---- 159 (752)
T PRK07232 89 MEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLEDIKAP--ECFYIEEKLRERMDIPVFHD---- 159 (752)
T ss_pred HHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeeeecCCc--hHHHHHHHHHHhcCCCeecc----
Confidence 446666676664 88777777544 6789999998886 78889987321111 22334444333323333332
Q ss_pred ccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC-----------
Q 024103 105 NLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT----------- 170 (272)
Q Consensus 105 ~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga---~V~v~~~~t----------- 170 (272)
+..+---.+..|++..++-.+.+++.-++++.|+|.+ |-.++.+|...|. .+++|+++-
T Consensus 160 ------D~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~~~ 232 (752)
T PRK07232 160 ------DQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRTEGMD 232 (752)
T ss_pred ------ccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCccccc
Confidence 2223223345778899999999999999999999998 9999999999997 689997541
Q ss_pred ------------CCHhhhcCCCcEEEEecCCCccccCCCcCC---CcEEEEeeeCCC
Q 024103 171 ------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 212 (272)
Q Consensus 171 ------------~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~---g~vviDig~~~~ 212 (272)
.+|.+.++.+|++|-..+ |+.++++|++. .-+|+=+. ||.
T Consensus 233 ~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 287 (752)
T PRK07232 233 EWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALA-NPD 287 (752)
T ss_pred HHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecC-CCC
Confidence 367899999999997766 88999999854 66777776 543
No 108
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.83 E-value=2.5e-05 Score=65.77 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=55.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCc----c-cc---
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----L-VR--- 194 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~----~-i~--- 194 (272)
++|-+||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||++++.+. . ..
T Consensus 2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 58999999986 9999999999999999999873 467888999999999998643 2 23
Q ss_pred CCCcCCCcEEEEeeeCC
Q 024103 195 GSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 195 ~~~vk~g~vviDig~~~ 211 (272)
...+++|.++||+....
T Consensus 81 ~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 81 LAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp GGGS-TTEEEEE-SS--
T ss_pred hhccccceEEEecCCcc
Confidence 23457899999998653
No 109
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.83 E-value=0.00012 Score=68.00 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=63.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHh-CCC-EEEEEeCCC-------------------CCHhhhcCCCcEEEEecCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT-------------------KNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~-~ga-~V~v~~~~t-------------------~~l~~~l~~ADIVIsa~g~p 190 (272)
-+...++++|+|+|.. |+..+..+.. ++. +|.+++|+. .++++.+++|||||++|+++
T Consensus 121 a~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~ 199 (304)
T PRK07340 121 APAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSR 199 (304)
T ss_pred CCCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCC
Confidence 3457899999999996 9999998865 554 799998862 24667889999999999987
Q ss_pred cc-ccCCCcCCCcEEEEeeeCC
Q 024103 191 NL-VRGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 191 ~~-i~~~~vk~g~vviDig~~~ 211 (272)
+. ++. |++||+.|.=+|.+.
T Consensus 200 ~Pl~~~-~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 200 TPVYPE-AARAGRLVVAVGAFT 220 (304)
T ss_pred CceeCc-cCCCCCEEEecCCCC
Confidence 75 565 899999999999653
No 110
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.83 E-value=3.8e-05 Score=76.45 Aligned_cols=81 Identities=19% Similarity=0.313 Sum_probs=66.7
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEecCCC----ccc
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVA----NLV 193 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa~g~p----~~i 193 (272)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+..++.. +++
T Consensus 133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 211 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI 211 (525)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence 45789999999999996 9999999999999999988631 36889999999999988832 356
Q ss_pred cCC---CcCCCcEEEEeeeCCC
Q 024103 194 RGS---WLKPGAVVLDVGTCPV 212 (272)
Q Consensus 194 ~~~---~vk~g~vviDig~~~~ 212 (272)
+++ .+|+|+++||++.-..
T Consensus 212 ~~~~l~~mk~ga~lIN~aRG~~ 233 (525)
T TIGR01327 212 GAEELAKMKKGVIIVNCARGGI 233 (525)
T ss_pred CHHHHhcCCCCeEEEEcCCCce
Confidence 544 4589999999997654
No 111
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.82 E-value=2.9e-05 Score=65.43 Aligned_cols=59 Identities=22% Similarity=0.253 Sum_probs=47.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCH--------------hhhcCCCcEEEEecCCCc
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP--------------EQITSEADIVIAAAGVAN 191 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-~~l--------------~~~l~~ADIVIsa~g~p~ 191 (272)
++++|++|+|||+|.. |.-.+..|.+.|++|++++... +++ ++.+.++|+||.||+.+.
T Consensus 9 l~l~~~~vlVvGGG~v-a~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e 82 (157)
T PRK06719 9 FNLHNKVVVIIGGGKI-AYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHA 82 (157)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHH
Confidence 5789999999999885 9999999999999999985431 111 234788999999998765
No 112
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.82 E-value=8.4e-05 Score=69.26 Aligned_cols=77 Identities=25% Similarity=0.317 Sum_probs=59.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHh-CC-CEEEEEeCCC--------------------CCHhhhcCCCcEEEEecCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~-~g-a~V~v~~~~t--------------------~~l~~~l~~ADIVIsa~g~p 190 (272)
....++++|||.|.. |++.+..+.. ++ .+|++++|+. .++++.+++|||||++|+.+
T Consensus 122 ~~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 122 RKDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST 200 (314)
T ss_pred CCCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence 357899999999996 9999875554 45 5899999862 23556788999999999977
Q ss_pred cc-ccCCCcCCCcEEEEeeeC
Q 024103 191 NL-VRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 191 ~~-i~~~~vk~g~vviDig~~ 210 (272)
.. ++.+|+++|++|.=+|.+
T Consensus 201 ~pvl~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 201 EPLVRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred CCEecHHHcCCCCEEEeeCCC
Confidence 65 788999999955445543
No 113
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.79 E-value=4.8e-05 Score=75.75 Aligned_cols=80 Identities=19% Similarity=0.310 Sum_probs=66.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCcEEEEecCCC----ccccC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVRG 195 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t------------~~l~~~l~~ADIVIsa~g~p----~~i~~ 195 (272)
.++.||++.|||.|.+ |+.++..|...|++|..++++. .++.+.+++||+|+..++.. +++.+
T Consensus 136 ~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~~ 214 (526)
T PRK13581 136 VELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIGA 214 (526)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcCH
Confidence 4689999999999996 9999999999999999998642 15678899999999998843 35655
Q ss_pred C---CcCCCcEEEEeeeCCC
Q 024103 196 S---WLKPGAVVLDVGTCPV 212 (272)
Q Consensus 196 ~---~vk~g~vviDig~~~~ 212 (272)
+ .+|+|+++|+++.-..
T Consensus 215 ~~l~~mk~ga~lIN~aRG~~ 234 (526)
T PRK13581 215 EELAKMKPGVRIINCARGGI 234 (526)
T ss_pred HHHhcCCCCeEEEECCCCce
Confidence 4 4589999999987654
No 114
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=97.77 E-value=0.00019 Score=68.92 Aligned_cols=168 Identities=17% Similarity=0.276 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcC-CCCCCCCHHHHHhcCCcccccCcccccc
Q 024103 25 YVRNKIKACEEV-GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQL-PLPQHLDEGKILDAVSLEKDVDGFHPLN 102 (272)
Q Consensus 25 Y~~~~~~~~~~~-Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~-Plp~~~~~~~i~~~i~p~KDvdg~~~~n 102 (272)
=...|.-.|+++ ||++.-+++... +.+|+.+.++.+. |.+-|||++- -.|+.+ .+...+....||--+|.--
T Consensus 102 VmeGKa~Lfk~faGid~~pI~ld~~-~~~ei~~~Vkal~--p~FgginLedi~ap~cf---~ie~~lr~~~~IPvFhDDq 175 (432)
T COG0281 102 VMEGKAVLFKAFAGIDVLPIELDVG-TNNEIIEFVKALE--PTFGGINLEDIDAPRCF---AIEERLRYRMNIPVFHDDQ 175 (432)
T ss_pred hhhhHHHHHHHhcCCCceeeEeeCC-ChHHHHHHHHHhh--hcCCCcceeecccchhh---HHHHHHhhcCCCCcccccc
Confidence 344666666654 789888888765 5678999999997 5799999863 222222 2333344455555544222
Q ss_pred ccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC------CCH
Q 024103 103 IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT------KNP 173 (272)
Q Consensus 103 ~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga---~V~v~~~~t------~~l 173 (272)
.+=---|..|++..|+-.|.+++..++++.|+|-+ |-+++.+|...|. +|++|+|+- +++
T Consensus 176 ----------qGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~r~~~ 244 (432)
T COG0281 176 ----------QGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDGREDL 244 (432)
T ss_pred ----------cHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCCCccc
Confidence 22112244788999999999999999999999988 9999999999996 699998761 010
Q ss_pred -------------------hhhcCCCcEEEEecCCCccccCCCcCC---CcEEEEeeeCC
Q 024103 174 -------------------EQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCP 211 (272)
Q Consensus 174 -------------------~~~l~~ADIVIsa~g~p~~i~~~~vk~---g~vviDig~~~ 211 (272)
.+.+..+|++|...+. +.+++||++. +-+|+=++ ||
T Consensus 245 ~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfala-NP 302 (432)
T COG0281 245 TMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALA-NP 302 (432)
T ss_pred ccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecC-CC
Confidence 2356789999988777 8888888754 45666665 44
No 115
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.76 E-value=3.3e-05 Score=60.36 Aligned_cols=59 Identities=24% Similarity=0.356 Sum_probs=46.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------CCHhhhcCCCcEEEEecCCCc
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-----------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
++++||+|+|||.|.. |..-+..|++.||+|+++.... +.+++.+..+|+||.|++.+.
T Consensus 3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~ 72 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPE 72 (103)
T ss_dssp E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HH
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHH
Confidence 5789999999999885 9999999999999999998762 345678899999999998765
No 116
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.72 E-value=6e-05 Score=70.72 Aligned_cols=135 Identities=19% Similarity=0.234 Sum_probs=89.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCcEEEEecC-CC---ccccC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAG-VA---NLVRG 195 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t------------~~l~~~l~~ADIVIsa~g-~p---~~i~~ 195 (272)
.+++||++-|||.|.+ |+++++.+..-|++|...+++. -++.+.+++||+|+...+ .| |+|.+
T Consensus 142 ~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin~ 220 (324)
T COG1052 142 FDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLINA 220 (324)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcCH
Confidence 5789999999999996 9999999998889999998763 137899999999998877 22 46776
Q ss_pred C---CcCCCcEEEEeeeCCCCCC---CCCCCCCCce---Eecccchhh-------hhh-hc---eEeccCCCcccHHHHH
Q 024103 196 S---WLKPGAVVLDVGTCPVDVS---VDPSCEYGYR---LMGDVCYEE-------AMR-LA---SVITPVPGGVGPMTVA 255 (272)
Q Consensus 196 ~---~vk~g~vviDig~~~~~~~---~~~~~~~~~k---~~Gdvd~~~-------~~~-~~---~~~tpvpGGvGp~T~a 255 (272)
+ .+|+|+++|++|--..-+. .+.+. .++ .--||-..+ +.. .. -.+||=.|+----|..
T Consensus 221 ~~l~~mk~ga~lVNtaRG~~VDe~ALi~AL~--~g~i~gaglDV~e~Ep~~~d~~l~~l~~~~~vvltPHia~at~ea~~ 298 (324)
T COG1052 221 EELAKMKPGAILVNTARGGLVDEQALIDALK--SGKIAGAGLDVFENEPALFDHPLLRLDNFPNVVLTPHIASATEEARK 298 (324)
T ss_pred HHHHhCCCCeEEEECCCccccCHHHHHHHHH--hCCcceEEeeecCCCCCCCChhHhhccCCCCEEEccccccccHHHHH
Confidence 6 4589999999986654210 00110 112 223443221 011 12 4567766666655666
Q ss_pred HHHHHHHHHHHHHh
Q 024103 256 MLLSNTLDSAKRAY 269 (272)
Q Consensus 256 mL~~n~v~a~~~~~ 269 (272)
-+...+++..+.|+
T Consensus 299 ~m~~~~~~nl~~~~ 312 (324)
T COG1052 299 AMAELALENLEAFF 312 (324)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666666655554
No 117
>PRK12861 malic enzyme; Reviewed
Probab=97.60 E-value=0.00012 Score=75.38 Aligned_cols=166 Identities=14% Similarity=0.213 Sum_probs=116.9
Q ss_pred HHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCH---HHHHhcCCcccccCccccc
Q 024103 26 VRNKIKACEEV-GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE---GKILDAVSLEKDVDGFHPL 101 (272)
Q Consensus 26 ~~~~~~~~~~~-Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~---~~i~~~i~p~KDvdg~~~~ 101 (272)
...|.-.|+.+ ||++.-+.+.. .+++|+++.++.+.. .+-||++. .+.. -++++.+...-|+-.||.
T Consensus 93 meGK~~L~~~~agid~~di~~~~-~dpd~~v~~v~a~~~--~fg~i~lE-----D~~~p~~f~il~~~~~~~~ipvf~D- 163 (764)
T PRK12861 93 MEGKAVLFKKFAGIDVFDIEINE-TDPDKLVDIIAGLEP--TFGGINLE-----DIKAPECFTVERKLRERMKIPVFHD- 163 (764)
T ss_pred HHHHHHHHhhccCCCccccccCC-CCHHHHHHHHHHHHh--hcCCceee-----eccCchHHHHHHHHHhcCCCCeecc-
Confidence 34566666665 48877677754 467899999988874 68887652 2222 233333322213333332
Q ss_pred cccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC--------
Q 024103 102 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT-------- 170 (272)
Q Consensus 102 n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga---~V~v~~~~t-------- 170 (272)
+..+---.+..|++..++-.+.+++.-++++.|+|-+ |.+++.+|...|. .+++|+++-
T Consensus 164 ---------D~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~ 233 (764)
T PRK12861 164 ---------DQHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGRTT 233 (764)
T ss_pred ---------ccchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcc
Confidence 2222222345778899999999999999999999998 9999999999997 699998531
Q ss_pred ---------------CCHhhhcCCCcEEEEecCCCccccCCCcCC---CcEEEEeeeCCC
Q 024103 171 ---------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 212 (272)
Q Consensus 171 ---------------~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~---g~vviDig~~~~ 212 (272)
.+|.+.++.+|++|-..+ |+.+++||++. .-+|+=++ ||.
T Consensus 234 ~l~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLs-NPt 291 (764)
T PRK12861 234 LMDPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALA-NPT 291 (764)
T ss_pred cCCHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECC-CCC
Confidence 367899999999997765 89999999854 66787776 554
No 118
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.54 E-value=0.00023 Score=65.71 Aligned_cols=73 Identities=27% Similarity=0.402 Sum_probs=59.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------CCHhhhcCCCcEEEEecCCCc----c-ccCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVAN----L-VRGS 196 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------------~~l~~~l~~ADIVIsa~g~p~----~-i~~~ 196 (272)
.+|..||-|.+ |.|++..|.+.|..|++++|+. .+..+..+.||+||+.++.+. . +.++
T Consensus 1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~ 79 (286)
T COG2084 1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN 79 (286)
T ss_pred CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence 37899999997 9999999999999999999984 244678999999999998654 1 2323
Q ss_pred ----CcCCCcEEEEeeeC
Q 024103 197 ----WLKPGAVVLDVGTC 210 (272)
Q Consensus 197 ----~vk~g~vviDig~~ 210 (272)
..++|.++||+.+.
T Consensus 80 g~~~~~~~G~i~IDmSTi 97 (286)
T COG2084 80 GLLEGLKPGAIVIDMSTI 97 (286)
T ss_pred chhhcCCCCCEEEECCCC
Confidence 34689999999865
No 119
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=97.50 E-value=0.00017 Score=67.76 Aligned_cols=79 Identities=16% Similarity=0.310 Sum_probs=63.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcCCCcEEEEecCC-C---cccc
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGV-A---NLVR 194 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------~l~~~l~~ADIVIsa~g~-p---~~i~ 194 (272)
.+++||+|.|+|.|.+ |+.+++.|..-|+.+.-+.|+.. ++.+.++++|+||.+.+- + |++.
T Consensus 158 ~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liN 236 (336)
T KOG0069|consen 158 YDLEGKTVGILGLGRI-GKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLIN 236 (336)
T ss_pred ccccCCEEEEecCcHH-HHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhh
Confidence 5788999999999996 99999999998865555555432 678899999999988873 2 3566
Q ss_pred CC---CcCCCcEEEEeeeCC
Q 024103 195 GS---WLKPGAVVLDVGTCP 211 (272)
Q Consensus 195 ~~---~vk~g~vviDig~~~ 211 (272)
++ +.|+|+++|+++--.
T Consensus 237 k~~~~~mk~g~vlVN~aRG~ 256 (336)
T KOG0069|consen 237 KKFIEKMKDGAVLVNTARGA 256 (336)
T ss_pred HHHHHhcCCCeEEEeccccc
Confidence 55 569999999998654
No 120
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.50 E-value=0.00026 Score=65.58 Aligned_cols=73 Identities=14% Similarity=0.248 Sum_probs=59.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCHhhhcCCCcEEEEecCCCcc---c---cCCCcCCCcEEEEe
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAGVANL---V---RGSWLKPGAVVLDV 207 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-~~l~~~l~~ADIVIsa~g~p~~---i---~~~~vk~g~vviDi 207 (272)
.+++|.|||.|.. |.+++..|...|.+|++.+|+. .++.+.+++||+||.+++.... + .+..++++.+++|.
T Consensus 3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~~~~~v~~~l~~~~~~~~~ivi~~ 81 (308)
T PRK14619 3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMKGVRPVAEQVQALNLPPETIIVTA 81 (308)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 4678999999885 9999999999999999999864 5688889999999999986431 2 22235778899997
Q ss_pred e
Q 024103 208 G 208 (272)
Q Consensus 208 g 208 (272)
.
T Consensus 82 s 82 (308)
T PRK14619 82 T 82 (308)
T ss_pred C
Confidence 5
No 121
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.48 E-value=0.00022 Score=62.69 Aligned_cols=59 Identities=22% Similarity=0.339 Sum_probs=48.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-CH-----------------hhhcCCCcEEEEecCCCc
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NP-----------------EQITSEADIVIAAAGVAN 191 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-~l-----------------~~~l~~ADIVIsa~g~p~ 191 (272)
++++||+|+|||.|.+ |..-+..|++.||.|+|+..+.. .+ .+.+..+|+||.||+.+.
T Consensus 5 l~l~gk~vlVvGgG~v-a~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~ 81 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDV-ALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEE 81 (205)
T ss_pred EEcCCCeEEEECcCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHH
Confidence 5789999999999885 99999999999999999976531 11 245788999999999763
No 122
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.44 E-value=0.0003 Score=67.20 Aligned_cols=75 Identities=17% Similarity=0.270 Sum_probs=59.1
Q ss_pred ccceEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCC-CCHhhhcCCCcEEEEecCCCc---cccC-CCcCCCcEEEEee
Q 024103 135 MGKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAGVAN---LVRG-SWLKPGAVVLDVG 208 (272)
Q Consensus 135 ~gk~v~ViG-~g~~vG~~la~~L~~~ga~V~v~~~~t-~~l~~~l~~ADIVIsa~g~p~---~i~~-~~vk~g~vviDig 208 (272)
..++++||| .|. +|..++..|.+.|..|+++++.. .+..+.+++||+||.+++... .+.. ..+++|++|+|+|
T Consensus 97 ~~~~I~IiGG~Gl-mG~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~~~~~~~~~l~~l~~~~iv~Dv~ 175 (374)
T PRK11199 97 DLRPVVIVGGKGQ-LGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIHLTEEVIARLPPLPEDCILVDLT 175 (374)
T ss_pred ccceEEEEcCCCh-hhHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHHHHHHHHHHHhCCCCCcEEEECC
Confidence 348899999 666 49999999999999999998754 356778899999999998432 2211 1178899999998
Q ss_pred eC
Q 024103 209 TC 210 (272)
Q Consensus 209 ~~ 210 (272)
..
T Consensus 176 Sv 177 (374)
T PRK11199 176 SV 177 (374)
T ss_pred Cc
Confidence 74
No 123
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.40 E-value=0.00043 Score=64.74 Aligned_cols=75 Identities=11% Similarity=0.185 Sum_probs=60.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCC--------------------CCHhhhcCCCcEEEEecCCCc-
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN- 191 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~g--a~V~v~~~~t--------------------~~l~~~l~~ADIVIsa~g~p~- 191 (272)
.-+++.|+|.|.- ++.-+..+..-- .+|.+.+|+. .+.++.+++||||+++|++..
T Consensus 127 d~~~l~iiG~G~q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P 205 (315)
T PRK06823 127 HVSAIGIVGTGIQ-ARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREP 205 (315)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCc
Confidence 5689999999885 888777766432 4899988763 346788999999999999665
Q ss_pred cccCCCcCCCcEEEEeeeC
Q 024103 192 LVRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 192 ~i~~~~vk~g~vviDig~~ 210 (272)
+++.+|+++|+.|.=+|.+
T Consensus 206 ~~~~~~l~~G~hi~~iGs~ 224 (315)
T PRK06823 206 LLQAEDIQPGTHITAVGAD 224 (315)
T ss_pred eeCHHHcCCCcEEEecCCC
Confidence 5799999999999999865
No 124
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=97.40 E-value=0.00037 Score=65.30 Aligned_cols=75 Identities=17% Similarity=0.298 Sum_probs=59.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCC--------------------CCHhhhcCCCcEEEEecCCCc-
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN- 191 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~--ga~V~v~~~~t--------------------~~l~~~l~~ADIVIsa~g~p~- 191 (272)
.-+++.|||.|.. |+.-+..|... ..+|.+++++. .+.++.+++|||||++|++..
T Consensus 127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P 205 (325)
T TIGR02371 127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP 205 (325)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4689999999986 99866655432 35899988762 345688899999999998655
Q ss_pred cccCCCcCCCcEEEEeeeC
Q 024103 192 LVRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 192 ~i~~~~vk~g~vviDig~~ 210 (272)
+++.+|+++|+.|.-+|.+
T Consensus 206 ~~~~~~l~~g~~v~~vGs~ 224 (325)
T TIGR02371 206 VVKADWVSEGTHINAIGAD 224 (325)
T ss_pred EecHHHcCCCCEEEecCCC
Confidence 4789999999999999965
No 125
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.36 E-value=0.00032 Score=58.75 Aligned_cols=69 Identities=26% Similarity=0.400 Sum_probs=51.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC----------------------------CCCHhhhcCCCcEEEEecCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~----------------------------t~~l~~~l~~ADIVIsa~g~ 189 (272)
||+|+|+|.. |.++|..|..+|.+|++..++ +.++++.+++||+||.+++.
T Consensus 1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 6899999986 999999999999999999765 24778999999999999986
Q ss_pred Cc---ccc--CCCcCCCcEEEEe
Q 024103 190 AN---LVR--GSWLKPGAVVLDV 207 (272)
Q Consensus 190 p~---~i~--~~~vk~g~vviDi 207 (272)
-. +++ ..+++++..++-+
T Consensus 80 ~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 80 QAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp GGHHHHHHHHTTTSHTT-EEEET
T ss_pred HHHHHHHHHHhhccCCCCEEEEe
Confidence 43 221 2345677766654
No 126
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=97.34 E-value=0.0005 Score=63.84 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=61.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-C-CEEEEEeCCC---------------------CCHhhhcCCCcEEEEecCCCc
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~-g-a~V~v~~~~t---------------------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
.-+++.|||+|.- |+.-+..+... . .+|.+.+|+. .+.++.+++||||+++|++..
T Consensus 116 da~~l~iiGaG~Q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~ 194 (301)
T PRK06407 116 NVENFTIIGSGFQ-AETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDT 194 (301)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCC
Confidence 5689999999886 99877777653 3 3799988762 346788999999999999765
Q ss_pred -cccCCCcCCCcEEEEeeeCC
Q 024103 192 -LVRGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 192 -~i~~~~vk~g~vviDig~~~ 211 (272)
+++.+|++||+.|.=+|.+.
T Consensus 195 P~~~~~~l~pg~hV~aiGs~~ 215 (301)
T PRK06407 195 PIFNRKYLGDEYHVNLAGSNY 215 (301)
T ss_pred cEecHHHcCCCceEEecCCCC
Confidence 47999999999999998654
No 127
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=97.33 E-value=0.00031 Score=65.84 Aligned_cols=71 Identities=17% Similarity=0.182 Sum_probs=55.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEecCCCc---cccC-
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVAN---LVRG- 195 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa~g~p~---~i~~- 195 (272)
.|+||+|.|||.|.+ |+++|..|...|.+|++.++.. .++.+.+++||+|+..++.+. ++..
T Consensus 13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~e 91 (335)
T PRK13403 13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAE 91 (335)
T ss_pred hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHH
Confidence 468999999999886 9999999999999999986642 157789999999998887532 3432
Q ss_pred --CCcCCCcEE
Q 024103 196 --SWLKPGAVV 204 (272)
Q Consensus 196 --~~vk~g~vv 204 (272)
..+++|+++
T Consensus 92 il~~MK~GaiL 102 (335)
T PRK13403 92 VEENLREGQML 102 (335)
T ss_pred HHhcCCCCCEE
Confidence 345777643
No 128
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=97.28 E-value=0.00045 Score=58.62 Aligned_cols=76 Identities=25% Similarity=0.284 Sum_probs=50.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCC---CccccC-
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV---ANLVRG- 195 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~---p~~i~~- 195 (272)
|+||+|.|||+|.- |++-+..|...|.+|++..|.. .+..|.++.||+|+..++- +.....
T Consensus 2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~ 80 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEE 80 (165)
T ss_dssp HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHH
T ss_pred cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHH
Confidence 58999999999986 9999999999999999998874 2567899999999999873 222211
Q ss_pred --CCcCCCcE-EEEeeeC
Q 024103 196 --SWLKPGAV-VLDVGTC 210 (272)
Q Consensus 196 --~~vk~g~v-viDig~~ 210 (272)
..+++|.+ ++-=|+|
T Consensus 81 I~p~l~~G~~L~fahGfn 98 (165)
T PF07991_consen 81 IAPNLKPGATLVFAHGFN 98 (165)
T ss_dssp HHHHS-TT-EEEESSSHH
T ss_pred HHhhCCCCCEEEeCCcch
Confidence 14677753 3333444
No 129
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=97.27 E-value=0.0092 Score=55.77 Aligned_cols=148 Identities=16% Similarity=0.134 Sum_probs=98.5
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCccc
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADG-CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 99 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~-~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~ 99 (272)
.|..=--+=..++.++|..+.++.-... ...+.+.+..+-|+. .+|+|.+-.|-- -....+.++ ..+-
T Consensus 53 pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~~~--~~~~~~a~~-------~~vP 121 (311)
T PRK14804 53 TSTRTRVSFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLKKH--EDLLVMKNG-------SQVP 121 (311)
T ss_pred CchhHHHHHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCCCh--HHHHHHHHH-------CCCC
Confidence 3444444567889999999988864321 122333344566665 589999886632 222222221 1233
Q ss_pred cccccccccCCCCCccccCCHHH-HHHHHHHhCC-CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------
Q 024103 100 PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------- 170 (272)
Q Consensus 100 ~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~-~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t------- 170 (272)
.+|.| ...+.||=+.+ ++.+.++.+. +++|++|+++|.++-|.+.++..+...|++|++++-..
T Consensus 122 VINag-------~~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~ 194 (311)
T PRK14804 122 VINGC-------DNMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIHA 194 (311)
T ss_pred EEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHHH
Confidence 45542 12367998888 5555555554 69999999999987889999999999999999987421
Q ss_pred ---------------CCHhhhcCCCcEEEEe
Q 024103 171 ---------------KNPEQITSEADIVIAA 186 (272)
Q Consensus 171 ---------------~~l~~~l~~ADIVIsa 186 (272)
.++++.++.||+|.+-
T Consensus 195 ~~~~~~~~~g~i~~~~d~~~av~~aDvvy~d 225 (311)
T PRK14804 195 QTVERAKKKGTLSWEMNLHKAVSHADYVYTD 225 (311)
T ss_pred HHHHHHHhcCCeEEEeCHHHHhCCCCEEEee
Confidence 4567888999999873
No 130
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.26 E-value=0.00026 Score=53.71 Aligned_cols=70 Identities=29% Similarity=0.340 Sum_probs=52.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC---CEEEEE-eCCC---------------C-CHhhhcCCCcEEEEecCCCcc--ccC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHH---ATVSIV-HALT---------------K-NPEQITSEADIVIAAAGVANL--VRG 195 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~g---a~V~v~-~~~t---------------~-~l~~~l~~ADIVIsa~g~p~~--i~~ 195 (272)
|+.+||.|.+ |.+++..|.+.| .+|+++ +|+. . +..+.+++||+||.++....+ +-.
T Consensus 1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~ 79 (96)
T PF03807_consen 1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS 79 (96)
T ss_dssp EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH
T ss_pred CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH
Confidence 6889999996 999999999999 899965 6653 1 456788899999999975442 211
Q ss_pred --CCcCCCcEEEEee
Q 024103 196 --SWLKPGAVVLDVG 208 (272)
Q Consensus 196 --~~vk~g~vviDig 208 (272)
....++.++||+.
T Consensus 80 ~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 80 EIPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHhhccCCCEEEEeC
Confidence 2456788888874
No 131
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.25 E-value=0.0007 Score=64.96 Aligned_cols=111 Identities=23% Similarity=0.228 Sum_probs=77.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC------------------------CCHhhhcCCCcEEEEecCCCc
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT------------------------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t------------------------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
++|+|||+|+ ||+++++.|++++ .+|++..|+. +.+.+.+++.|+||++.+.+.
T Consensus 2 ~~ilviGaG~-Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGAGG-VGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECCch-hHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 6899999988 5999999999999 7999999872 245688999999999998654
Q ss_pred c--ccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCC-cccHHHHHHHHHHHHHH
Q 024103 192 L--VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMTVAMLLSNTLDS 264 (272)
Q Consensus 192 ~--i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpG-GvGp~T~amL~~n~v~a 264 (272)
- +=+..++.|.-++|+.+.... . -+++..+++++ +|-++| |+-|=-+..+...+++-
T Consensus 81 ~~~i~ka~i~~gv~yvDts~~~~~----------~-----~~~~~~a~~Ag-it~v~~~G~dPGi~nv~a~~a~~~ 140 (389)
T COG1748 81 DLTILKACIKTGVDYVDTSYYEEP----------P-----WKLDEEAKKAG-ITAVLGCGFDPGITNVLAAYAAKE 140 (389)
T ss_pred hHHHHHHHHHhCCCEEEcccCCch----------h-----hhhhHHHHHcC-eEEEcccCcCcchHHHHHHHHHHH
Confidence 2 333456778889999877532 1 11233355666 233442 55555555666555443
No 132
>PRK07589 ornithine cyclodeaminase; Validated
Probab=97.23 E-value=0.00088 Score=63.48 Aligned_cols=76 Identities=13% Similarity=0.195 Sum_probs=59.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-C-CEEEEEeCCC--------------------CCHhhhcCCCcEEEEecCCC--
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVA-- 190 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~-g-a~V~v~~~~t--------------------~~l~~~l~~ADIVIsa~g~p-- 190 (272)
.-+++.|||+|.- ++.-+..+... . -+|++.+|+. .+.++.+++||||+++|+++
T Consensus 128 da~~l~iiGaG~Q-A~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~ 206 (346)
T PRK07589 128 DSRTMALIGNGAQ-SEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTN 206 (346)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCC
Confidence 4588999999885 87776655433 3 4799988762 35678899999999999854
Q ss_pred -ccccCCCcCCCcEEEEeeeCC
Q 024103 191 -NLVRGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 191 -~~i~~~~vk~g~vviDig~~~ 211 (272)
.+++.+|+++|+.|.=+|.+.
T Consensus 207 ~Pvl~~~~lkpG~hV~aIGs~~ 228 (346)
T PRK07589 207 ATILTDDMVEPGMHINAVGGDC 228 (346)
T ss_pred CceecHHHcCCCcEEEecCCCC
Confidence 358999999999999888653
No 133
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.21 E-value=0.00064 Score=62.21 Aligned_cols=72 Identities=19% Similarity=0.309 Sum_probs=56.2
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCc----c-ccC---
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----L-VRG--- 195 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~----~-i~~--- 195 (272)
+|.|||.|.+ |.+++..|++.|.+|++++++. .+..+.+++||+||.+++.+. . +..
T Consensus 1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~ 79 (291)
T TIGR01505 1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGI 79 (291)
T ss_pred CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchH
Confidence 4789999886 9999999999999999998773 355678899999999998532 1 121
Q ss_pred -CCcCCCcEEEEeeeC
Q 024103 196 -SWLKPGAVVLDVGTC 210 (272)
Q Consensus 196 -~~vk~g~vviDig~~ 210 (272)
..++++.+++|.+..
T Consensus 80 ~~~~~~g~iivd~st~ 95 (291)
T TIGR01505 80 IEGAKPGKTLVDMSSI 95 (291)
T ss_pred hhcCCCCCEEEECCCC
Confidence 245788999997643
No 134
>PLN02712 arogenate dehydrogenase
Probab=97.20 E-value=0.00074 Score=69.15 Aligned_cols=80 Identities=11% Similarity=0.171 Sum_probs=60.8
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcC-CCcEEEEecCCCc---c
Q 024103 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITS-EADIVIAAAGVAN---L 192 (272)
Q Consensus 130 ~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------~l~~~l~-~ADIVIsa~g~p~---~ 192 (272)
.+.++++++|.|||.|.+ |..++..|.+.|.+|++++++.. ++.+.+. .+|+||.+++... +
T Consensus 363 ~~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~v 441 (667)
T PLN02712 363 CVNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEKV 441 (667)
T ss_pred ccCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHHH
Confidence 445678999999999885 99999999999999999987632 3334454 5899999998432 2
Q ss_pred cc---CCCcCCCcEEEEeeeC
Q 024103 193 VR---GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 193 i~---~~~vk~g~vviDig~~ 210 (272)
+. ...++++++|+|++..
T Consensus 442 i~~l~~~~lk~g~ivvDv~Sv 462 (667)
T PLN02712 442 LKSLPFQRLKRSTLFVDVLSV 462 (667)
T ss_pred HHHHHHhcCCCCcEEEECCCc
Confidence 22 2346889999999754
No 135
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.19 E-value=0.00092 Score=61.53 Aligned_cols=73 Identities=26% Similarity=0.347 Sum_probs=57.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------CH-hhhcCCCcEEEEecCCCc---cc
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NP-EQITSEADIVIAAAGVAN---LV 193 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~------------------~l-~~~l~~ADIVIsa~g~p~---~i 193 (272)
-++|+|+|.|.+ |+.++..|.++|..|.++.+... +. .+....||+||.+++... ++
T Consensus 3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l 81 (279)
T COG0287 3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL 81 (279)
T ss_pred CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHH
Confidence 368999999886 99999999999999988876531 22 566788999999998543 22
Q ss_pred ---cCCCcCCCcEEEEeeeC
Q 024103 194 ---RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 194 ---~~~~vk~g~vviDig~~ 210 (272)
.+ .+++|++|.|++..
T Consensus 82 ~~l~~-~l~~g~iv~Dv~S~ 100 (279)
T COG0287 82 KELAP-HLKKGAIVTDVGSV 100 (279)
T ss_pred HHhcc-cCCCCCEEEecccc
Confidence 22 68999999999965
No 136
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=97.18 E-value=0.00072 Score=62.16 Aligned_cols=92 Identities=13% Similarity=0.270 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC----CC-------EEEEEeCCC-----------------
Q 024103 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HA-------TVSIVHALT----------------- 170 (272)
Q Consensus 119 Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~----ga-------~V~v~~~~t----------------- 170 (272)
+..|++..++-.+.+++.-+++++|+|.+ |..++.+|... |. .+++++++-
T Consensus 8 ~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a 86 (279)
T cd05312 8 ALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFA 86 (279)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHH
Confidence 44678899999999999999999999998 99999888765 76 788887651
Q ss_pred --------CCHhhhcC--CCcEEEEecCCCccccCCCcC------CCcEEEEeeeCCC
Q 024103 171 --------KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 212 (272)
Q Consensus 171 --------~~l~~~l~--~ADIVIsa~g~p~~i~~~~vk------~g~vviDig~~~~ 212 (272)
.+|.+.++ ++|++|-.++.|+.+++++++ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 143 (279)
T cd05312 87 RKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALS-NPT 143 (279)
T ss_pred hhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-CcC
Confidence 25778888 889999988888899988874 356777666 443
No 137
>PRK06046 alanine dehydrogenase; Validated
Probab=97.17 E-value=0.00098 Score=62.45 Aligned_cols=74 Identities=20% Similarity=0.345 Sum_probs=58.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHh-CCC-EEEEEeCCC---------------------CCHhhhcCCCcEEEEecCCCc
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~-~ga-~V~v~~~~t---------------------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
.-+++.|||.|.. |+..+..|.. .+. .|.+++++. .+.++.++ +|+|+++|+...
T Consensus 128 ~~~~vgiiG~G~q-a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~ 205 (326)
T PRK06046 128 DSKVVGIIGAGNQ-ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRK 205 (326)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCC
Confidence 4679999999996 9988888774 344 788888753 23456665 999999999654
Q ss_pred -cccCCCcCCCcEEEEeeeC
Q 024103 192 -LVRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 192 -~i~~~~vk~g~vviDig~~ 210 (272)
+++.+|+++|+.|.-+|.+
T Consensus 206 P~~~~~~l~~g~hV~~iGs~ 225 (326)
T PRK06046 206 PVVKAEWIKEGTHINAIGAD 225 (326)
T ss_pred cEecHHHcCCCCEEEecCCC
Confidence 5899999999999999965
No 138
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=97.14 E-value=0.00059 Score=60.28 Aligned_cols=116 Identities=21% Similarity=0.287 Sum_probs=72.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-C-----------------CHhhhcCCCcEEEEecCCCcc-
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K-----------------NPEQITSEADIVIAAAGVANL- 192 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-~-----------------~l~~~l~~ADIVIsa~g~p~~- 192 (272)
++++||+|+|||.|.. |.-=+..|++.||+|+|..... + -..+.+..+++||.||+.+.+
T Consensus 8 ~~l~~k~VlvvGgG~v-a~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 8 LDLEGKKVLVVGGGSV-ALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHH
Confidence 5789999999999884 9889999999999999986543 1 113456669999999997653
Q ss_pred --ccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhh---ceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 193 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 193 --i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~---~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
+-.. -++-.+.+++.-.|.. +|+-|.+.-++ .-.++ -||-+|+.+.|+.+......
T Consensus 87 ~~i~~~-a~~~~i~vNv~D~p~~--------------~~f~~Pa~~~r~~l~iaIs--T~G~sP~la~~ir~~Ie~~l 147 (210)
T COG1648 87 ERIAKA-ARERRILVNVVDDPEL--------------CDFIFPAIVDRGPLQIAIS--TGGKSPVLARLLREKIEALL 147 (210)
T ss_pred HHHHHH-HHHhCCceeccCCccc--------------CceecceeeccCCeEEEEE--CCCCChHHHHHHHHHHHHHc
Confidence 2111 1122234444433321 22222221111 22222 48899999999887765443
No 139
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.13 E-value=0.001 Score=60.83 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=57.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCc----cc-cC--
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-RG-- 195 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~----~i-~~-- 195 (272)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .+..+.++++|+||.+++.+. .+ ..
T Consensus 3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~ 81 (296)
T PRK11559 3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENG 81 (296)
T ss_pred ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcch
Confidence 47999999886 9999999999999999998763 345677899999999998432 22 11
Q ss_pred --CCcCCCcEEEEeeeCC
Q 024103 196 --SWLKPGAVVLDVGTCP 211 (272)
Q Consensus 196 --~~vk~g~vviDig~~~ 211 (272)
..++++.+++|++...
T Consensus 82 ~~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 82 IIEGAKPGTVVIDMSSIA 99 (296)
T ss_pred HhhcCCCCcEEEECCCCC
Confidence 2457899999987553
No 140
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=97.12 E-value=0.0097 Score=56.22 Aligned_cols=148 Identities=11% Similarity=0.007 Sum_probs=99.6
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcc
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~--~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~ 98 (272)
.|..=--+=..++.++|..+.+..-... ...+.+.+.++-|+.- +|+|.+.-| .+-...++-+.. .+
T Consensus 55 pSTRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~--~~~~~~~~a~~~-------~v 123 (336)
T PRK03515 55 DSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGY--GQEIVETLAEYA-------GV 123 (336)
T ss_pred CChhHHHHHHHHHHHcCCcEEEeCCccccCCCCCCHHHHHHHHHHh--CcEEEEEeC--ChHHHHHHHHhC-------CC
Confidence 3444444566788999999988532110 1235677788877764 789999866 322223332222 13
Q ss_pred ccccccccccCCCCCccccCCHHH-HHHHHHHhCC-CCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC------
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------ 169 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~-~l~gk~v~ViG~g-~~vG~~la~~L~~~ga~V~v~~~~------ 169 (272)
-.+|. + .+...||=+.+ ++.+.++.+. +++|++++.+|-+ ..|.+.++.++...|+++++|+-.
T Consensus 124 PVINa-----~--~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~ 196 (336)
T PRK03515 124 PVWNG-----L--TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKACWPEA 196 (336)
T ss_pred CEEEC-----C--CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchhcCcH
Confidence 34453 1 23467998888 5555555553 7999999999975 347999999999999999998632
Q ss_pred -------------------CCCHhhhcCCCcEEEEe
Q 024103 170 -------------------TKNPEQITSEADIVIAA 186 (272)
Q Consensus 170 -------------------t~~l~~~l~~ADIVIsa 186 (272)
+.++++.+++||+|.+-
T Consensus 197 ~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd 232 (336)
T PRK03515 197 ALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTD 232 (336)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 14567889999999975
No 141
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=97.11 E-value=0.00068 Score=61.48 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=74.0
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-----------EEEEEeCCC-----------------
Q 024103 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-----------TVSIVHALT----------------- 170 (272)
Q Consensus 119 Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-----------~V~v~~~~t----------------- 170 (272)
|..|++..++-.+.+++.-+++++|+|-+ |..++.+|...+. .+++++++-
T Consensus 8 ~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~ 86 (254)
T cd00762 8 AVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLA 86 (254)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHH
Confidence 44678889999999999999999999998 9999998877653 588887651
Q ss_pred ---------CCHhhhcC--CCcEEEEecCCCccccCCCcC------CCcEEEEeeeCCC
Q 024103 171 ---------KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 212 (272)
Q Consensus 171 ---------~~l~~~l~--~ADIVIsa~g~p~~i~~~~vk------~g~vviDig~~~~ 212 (272)
.+|.+.++ ++|++|-..+.|+.+++|+++ +.-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 144 (254)
T cd00762 87 RFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALS-NPT 144 (254)
T ss_pred HHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECC-CcC
Confidence 25778888 999999999989999999874 345777665 443
No 142
>PLN02256 arogenate dehydrogenase
Probab=97.10 E-value=0.002 Score=59.91 Aligned_cols=77 Identities=17% Similarity=0.250 Sum_probs=58.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhc-CCCcEEEEecCCCc---ccc
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQIT-SEADIVIAAAGVAN---LVR 194 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l-~~ADIVIsa~g~p~---~i~ 194 (272)
-+-+++++.|||.|.+ |..++..|.+.|.+|++++++. .++.+.+ .++|+||.+++... ++.
T Consensus 32 ~~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~ 110 (304)
T PLN02256 32 EKSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLR 110 (304)
T ss_pred ccCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHH
Confidence 3457889999999886 9999999999998999887664 1334444 46999999998432 232
Q ss_pred ---CCCcCCCcEEEEeee
Q 024103 195 ---GSWLKPGAVVLDVGT 209 (272)
Q Consensus 195 ---~~~vk~g~vviDig~ 209 (272)
...++++++|+|++.
T Consensus 111 ~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 111 SLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred hhhhhccCCCCEEEecCC
Confidence 234678999999997
No 143
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.09 E-value=0.00089 Score=59.03 Aligned_cols=73 Identities=26% Similarity=0.347 Sum_probs=57.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------CHhhhcCCCcEEEEecCCCcc---cc--
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NPEQITSEADIVIAAAGVANL---VR-- 194 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-----------------~l~~~l~~ADIVIsa~g~p~~---i~-- 194 (272)
+++.|+|+|.+ |.+++..|...|.+|++.+|+.+ +.++..+.||+||-|++.+.. +.
T Consensus 2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l 80 (211)
T COG2085 2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAEL 80 (211)
T ss_pred cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHH
Confidence 57899999996 99999999999999999987753 345788999999999996543 21
Q ss_pred CCCcCCCcEEEEeeeCCC
Q 024103 195 GSWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 195 ~~~vk~g~vviDig~~~~ 212 (272)
.+++. |.+|||+. ||.
T Consensus 81 ~~~~~-~KIvID~t-np~ 96 (211)
T COG2085 81 RDALG-GKIVIDAT-NPI 96 (211)
T ss_pred HHHhC-CeEEEecC-CCc
Confidence 22333 79999986 553
No 144
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.09 E-value=0.0015 Score=63.96 Aligned_cols=132 Identities=20% Similarity=0.181 Sum_probs=74.6
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----CHhhhcCCCcEEEEecCC-CccccCCCcCCC
Q 024103 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----NPEQITSEADIVIAAAGV-ANLVRGSWLKPG 201 (272)
Q Consensus 127 l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~----~l~~~l~~ADIVIsa~g~-p~~i~~~~vk~g 201 (272)
|...+.++++++|+|+|.|.+ |..+|..|.++|++|+++++... .+.+.+++..+-+- .|. +. ......
T Consensus 7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~-~~~~~~----~~~~~D 80 (480)
T PRK01438 7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVR-LGPGPT----LPEDTD 80 (480)
T ss_pred hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEE-ECCCcc----ccCCCC
Confidence 456677889999999999996 99999999999999999986542 12233333333221 111 10 011223
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCceEecccchh-hhhh---hceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 202 AVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYE-EAMR---LASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 202 ~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~-~~~~---~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
.+|+-.|++|...........+-.+.++.++- ...+ +...| -|-|-.|.=|+.-|+.++++..
T Consensus 81 ~Vv~s~Gi~~~~~~~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I-~VTGTnGKTTTt~mi~~iL~~~ 147 (480)
T PRK01438 81 LVVTSPGWRPDAPLLAAAADAGIPVWGEVELAWRLRDPDRPAPWL-AVTGTNGKTTTVQMLASMLRAA 147 (480)
T ss_pred EEEECCCcCCCCHHHHHHHHCCCeecchHHHHHHhhhccCCCCEE-EEeCCCcHHHHHHHHHHHHHHc
Confidence 44555555443200000000122456666642 1111 11112 3558889999999999988754
No 145
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=97.09 E-value=0.018 Score=54.40 Aligned_cols=146 Identities=13% Similarity=0.065 Sum_probs=98.8
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCCC----CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccC
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADGC----TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 96 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~----~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvd 96 (272)
.|..=--+=..++.++|.++.++. ... ..+.+.+.++-|+.- +|+|.+.-|-. -...++.+..
T Consensus 56 pSTRTR~SFe~A~~~LGg~~i~l~--~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~~~--~~~~~~a~~~------- 122 (334)
T PRK01713 56 TSTRTRCAFEVAAYDQGAQVTYID--PNSSQIGHKESMKDTARVLGRM--YDAIEYRGFKQ--SIVNELAEYA------- 122 (334)
T ss_pred CCchHHHHHHHHHHHcCCeEEEcC--CccccCCCCcCHHHHHHHHHHh--CCEEEEEcCch--HHHHHHHHhC-------
Confidence 343333455678899999988753 221 235677777777764 88999876522 1222222221
Q ss_pred ccccccccccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC-----
Q 024103 97 GFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL----- 169 (272)
Q Consensus 97 g~~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g-~~vG~~la~~L~~~ga~V~v~~~~----- 169 (272)
.+-.+|.+ .+...||=+.+ ++.+.++.+.+++|++++++|-+ ..|.+.++..+...|++|++|.-.
T Consensus 123 ~vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~ 195 (334)
T PRK01713 123 GVPVFNGL-------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPE 195 (334)
T ss_pred CCCEEECC-------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcCC
Confidence 13444541 23467998888 56666666657999999999986 447999999999999999998633
Q ss_pred --------------------CCCHhhhcCCCcEEEEe
Q 024103 170 --------------------TKNPEQITSEADIVIAA 186 (272)
Q Consensus 170 --------------------t~~l~~~l~~ADIVIsa 186 (272)
+.++.+.+++||+|.+-
T Consensus 196 ~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~ 232 (334)
T PRK01713 196 ASLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTD 232 (334)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 14567889999999974
No 146
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.09 E-value=0.00091 Score=61.67 Aligned_cols=74 Identities=20% Similarity=0.291 Sum_probs=58.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCc----ccc-CC-
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR-GS- 196 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~----~i~-~~- 196 (272)
++|.|||.|.+ |.+++..|++.|.+|++++++. .+..+.++++|+||.+++.+. .+. .+
T Consensus 2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~ 80 (296)
T PRK15461 2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENG 80 (296)
T ss_pred CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCccc
Confidence 37999999886 9999999999999999998863 345677899999999998653 222 11
Q ss_pred ---CcCCCcEEEEeeeCC
Q 024103 197 ---WLKPGAVVLDVGTCP 211 (272)
Q Consensus 197 ---~vk~g~vviDig~~~ 211 (272)
.+++|.++||.+...
T Consensus 81 i~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 81 VCEGLSRDALVIDMSTIH 98 (296)
T ss_pred HhhcCCCCCEEEECCCCC
Confidence 257789999988654
No 147
>PRK13529 malate dehydrogenase; Provisional
Probab=97.07 E-value=0.0027 Score=63.36 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=74.6
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----CCC-------EEEEEeCCC---------------
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHALT--------------- 170 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~----~ga-------~V~v~~~~t--------------- 170 (272)
-.+..|++..++-.+.+++.-+++++|+|.+ |-.++.+|.. +|. .+++++++-
T Consensus 276 aV~LAgll~A~r~~g~~l~d~riv~~GAGsA-giGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~ 354 (563)
T PRK13529 276 AVTLAGLLAALKITGEPLSDQRIVFLGAGSA-GCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKP 354 (563)
T ss_pred HHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHH
Confidence 4556788999999999999999999999998 9999998876 676 688887651
Q ss_pred -----------------CCHhhhcCCC--cEEEEecCCCccccCCCcCC------CcEEEEeeeCC
Q 024103 171 -----------------KNPEQITSEA--DIVIAAAGVANLVRGSWLKP------GAVVLDVGTCP 211 (272)
Q Consensus 171 -----------------~~l~~~l~~A--DIVIsa~g~p~~i~~~~vk~------g~vviDig~~~ 211 (272)
.+|.+.++.+ |++|-..+.|+.+++++++. .-+|+=+. ||
T Consensus 355 fa~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NP 419 (563)
T PRK13529 355 YARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPGAFTEEIVKEMAAHCERPIIFPLS-NP 419 (563)
T ss_pred HhhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-Cc
Confidence 2577888888 99998888888888888743 45666665 44
No 148
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=97.06 E-value=0.024 Score=53.55 Aligned_cols=149 Identities=11% Similarity=-0.016 Sum_probs=100.5
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCC--CCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcc
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFAD--GCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~--~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~ 98 (272)
.|..=--+=..++.++|..+.++.-.. -...|.+.+.++-|+.- +|+|.+.-|-.. ...++-++. + +
T Consensus 55 pSTRTR~SFE~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~~~--~~~~~a~~~----~---v 123 (334)
T PRK12562 55 DSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGHGQE--VVETLAEYA----G---V 123 (334)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHh--CCEEEEECCchH--HHHHHHHhC----C---C
Confidence 444444456788999999999774211 01235677777777774 889999876332 222222222 1 3
Q ss_pred ccccccccccCCCCCccccCCHHH-HHHHHHHhCC-CCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCCC-----
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHALT----- 170 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~-~l~gk~v~ViG~g-~~vG~~la~~L~~~ga~V~v~~~~t----- 170 (272)
-.+|.+ .+...||=+.+ ++.+.++.+. .++|++++++|-+ ..|.+.++..+...|++|++|.-..
T Consensus 124 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~ 196 (334)
T PRK12562 124 PVWNGL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEA 196 (334)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCcH
Confidence 445642 23467998888 5555556553 5899999999985 3479999999999999999986331
Q ss_pred --------------------CCHhhhcCCCcEEEEec
Q 024103 171 --------------------KNPEQITSEADIVIAAA 187 (272)
Q Consensus 171 --------------------~~l~~~l~~ADIVIsa~ 187 (272)
.++++.++.||+|.+-.
T Consensus 197 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 233 (334)
T PRK12562 197 SLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTDV 233 (334)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 45678899999999754
No 149
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=97.03 E-value=0.0017 Score=60.53 Aligned_cols=76 Identities=21% Similarity=0.307 Sum_probs=49.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHh-CC-CEEEEEeCCC--------------------CCHhhhcCCCcEEEEecCCCc-
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN- 191 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~-~g-a~V~v~~~~t--------------------~~l~~~l~~ADIVIsa~g~p~- 191 (272)
.-+++.|||+|.- ++.-+..|.. +. .+|.|.+|+. .+.++.+++|||||++|++..
T Consensus 127 ~~~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~ 205 (313)
T PF02423_consen 127 DARTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTP 205 (313)
T ss_dssp T--EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSE
T ss_pred CCceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCC
Confidence 4578999999885 8887777654 44 4899998862 357899999999999999655
Q ss_pred --cccCCCcCCCcEEEEeeeCC
Q 024103 192 --LVRGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 192 --~i~~~~vk~g~vviDig~~~ 211 (272)
+++.+|+++|+.|.-+|...
T Consensus 206 ~P~~~~~~l~~g~hi~~iGs~~ 227 (313)
T PF02423_consen 206 APVFDAEWLKPGTHINAIGSYT 227 (313)
T ss_dssp EESB-GGGS-TT-EEEE-S-SS
T ss_pred CccccHHHcCCCcEEEEecCCC
Confidence 58999999999999999763
No 150
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=97.02 E-value=0.021 Score=53.88 Aligned_cols=148 Identities=12% Similarity=0.010 Sum_probs=97.9
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCC--CCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcc
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFAD--GCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~--~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~ 98 (272)
.|..=--+-..+++++|..+.+..-.. -...+.+.+.++-|+.- +|+|.+--|-.. ...++-++. + +
T Consensus 56 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y--~D~iviR~~~~~--~~~~~a~~~----~---v 124 (331)
T PRK02102 56 TSTRTRCAFEVAAIDLGAHVTYLGPNDSQLGKKESIEDTARVLGRM--YDGIEYRGFKQE--IVEELAKYS----G---V 124 (331)
T ss_pred CChhHHHHHHHHHHHcCCCEEEcCcccccCCCCcCHHHHHHHHhhc--CCEEEEECCchH--HHHHHHHhC----C---C
Confidence 344444456788999999998653211 01235677777777764 889998866322 222222222 1 3
Q ss_pred ccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC--------
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-------- 169 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g-~~vG~~la~~L~~~ga~V~v~~~~-------- 169 (272)
-.+|.|. +...||=+.+=+--+++....++|++++++|-+ ..|.+.++..+...|++|++++-.
T Consensus 125 PVINa~~-------~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~ 197 (331)
T PRK02102 125 PVWNGLT-------DEWHPTQMLADFMTMKEHFGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRICAPKELWPEEEL 197 (331)
T ss_pred CEEECCC-------CCCChHHHHHHHHHHHHHhCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEECCcccccCHHH
Confidence 3455422 346799888844444444457999999999996 447999999999999999999632
Q ss_pred -----------------CCCHhhhcCCCcEEEEe
Q 024103 170 -----------------TKNPEQITSEADIVIAA 186 (272)
Q Consensus 170 -----------------t~~l~~~l~~ADIVIsa 186 (272)
+.++++.++.||+|.+-
T Consensus 198 ~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 231 (331)
T PRK02102 198 VALAREIAKETGAKITITEDPEEAVKGADVIYTD 231 (331)
T ss_pred HHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 14567889999999974
No 151
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=97.02 E-value=0.017 Score=53.71 Aligned_cols=147 Identities=13% Similarity=0.126 Sum_probs=99.6
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcc
Q 024103 22 SQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (272)
Q Consensus 22 s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~---~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~ 98 (272)
|..=--+-..++.++|..+.++.-+.+. ..|.+.+..+-|+.- +|+|.+--| .+-...++.++. .+
T Consensus 50 STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~s-------~v 118 (301)
T TIGR00670 50 STRTRLSFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHP--LEGAARLAAEVS-------EV 118 (301)
T ss_pred CchhHhHHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECC--chhHHHHHHhhC-------CC
Confidence 4444445668899999988876541211 234567777777664 789998866 333333333332 23
Q ss_pred ccccccccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCCCEEEEEeCC------
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL------ 169 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g--~~vG~~la~~L~~~ga~V~v~~~~------ 169 (272)
-.+|.|. ...+.||=+.+ ++.+.++.| +++|++|+++|-+ +.|.+.++..++..|++|++++-.
T Consensus 119 PVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~ 191 (301)
T TIGR00670 119 PVINAGD------GSNQHPTQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPK 191 (301)
T ss_pred CEEeCCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCH
Confidence 4455421 23467998888 455545555 7999999999996 457999999999999999999733
Q ss_pred ---------------CCCHhhhcCCCcEEEEe
Q 024103 170 ---------------TKNPEQITSEADIVIAA 186 (272)
Q Consensus 170 ---------------t~~l~~~l~~ADIVIsa 186 (272)
+.++++.++.||+|.+-
T Consensus 192 ~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~ 223 (301)
T TIGR00670 192 EILEELKAKGIKVRETESLEEVIDEADVLYVT 223 (301)
T ss_pred HHHHHHHHcCCEEEEECCHHHHhCCCCEEEEC
Confidence 24567889999998874
No 152
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=97.01 E-value=0.018 Score=54.50 Aligned_cols=145 Identities=10% Similarity=0.070 Sum_probs=99.3
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcc
Q 024103 22 SQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (272)
Q Consensus 22 s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~---~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~ 98 (272)
|..=--+-..++.++|..+.++.- .+. ..+.+.+.++-|+.- +|+|.+--+ .+-...++-++ -.+
T Consensus 53 STRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~~~~~a~~-------~~v 120 (338)
T PRK02255 53 STRTRVSFETAMTQLGGHAQYLAP-GQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQTVVELAKY-------ATV 120 (338)
T ss_pred CcchHHHHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHHHHHHHHh-------CCC
Confidence 333334567889999999887752 221 235577777777764 788888765 32222222222 123
Q ss_pred ccccccccccCCCCCccccCCHHH-HHHHHHHhC--CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC------
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL------ 169 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~--~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~------ 169 (272)
-.+|.+ .+...||=+.+ ++.+.++.+ .+++|++|+++|-+..|.+.++..+...|++|++|+-.
T Consensus 121 PVINa~-------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~ 193 (338)
T PRK02255 121 PVINGM-------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGYQLPE 193 (338)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCccccCH
Confidence 445531 23367998888 555556654 36999999999997778999999999999999999633
Q ss_pred -------------------CCCHhhhcCCCcEEEE
Q 024103 170 -------------------TKNPEQITSEADIVIA 185 (272)
Q Consensus 170 -------------------t~~l~~~l~~ADIVIs 185 (272)
+.++++.++.||+|.+
T Consensus 194 ~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~ 228 (338)
T PRK02255 194 EHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYT 228 (338)
T ss_pred HHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEE
Confidence 2466789999999997
No 153
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=97.01 E-value=0.00093 Score=60.66 Aligned_cols=92 Identities=14% Similarity=0.241 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC----CC-------EEEEEeCCC-----------------
Q 024103 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HA-------TVSIVHALT----------------- 170 (272)
Q Consensus 119 Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~----ga-------~V~v~~~~t----------------- 170 (272)
|-.|++..++-.+.+|+..+++++|+|.+ |-.++.+|... |. .+++++++-
T Consensus 8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a 86 (255)
T PF03949_consen 8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA 86 (255)
T ss_dssp HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence 34678899999999999999999999987 99999888776 76 489998650
Q ss_pred ---------CCHhhhcCCC--cEEEEecCCCccccCCCcCC------CcEEEEeeeCCC
Q 024103 171 ---------KNPEQITSEA--DIVIAAAGVANLVRGSWLKP------GAVVLDVGTCPV 212 (272)
Q Consensus 171 ---------~~l~~~l~~A--DIVIsa~g~p~~i~~~~vk~------g~vviDig~~~~ 212 (272)
.+|.+.++.+ |++|-..|.|+.+++|+++. .-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LS-NPt 144 (255)
T PF03949_consen 87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLS-NPT 144 (255)
T ss_dssp BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-S-SSC
T ss_pred ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECC-CCC
Confidence 2788999999 99999999999999998743 45676665 443
No 154
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.00 E-value=0.001 Score=61.43 Aligned_cols=74 Identities=26% Similarity=0.342 Sum_probs=56.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC----------------CCHhhhcCCCcEEEEecCCCc---ccc
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR 194 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t----------------~~l~~~l~~ADIVIsa~g~p~---~i~ 194 (272)
.++|.|||.|.+ |..++..|.+.|. .|++++++. .++.+.++++|+||.+++... ++.
T Consensus 6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~ 84 (307)
T PRK07502 6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAA 84 (307)
T ss_pred CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHH
Confidence 368999999885 9999999998884 789888752 245567889999999998543 121
Q ss_pred --CCCcCCCcEEEEeeeC
Q 024103 195 --GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 195 --~~~vk~g~vviDig~~ 210 (272)
..+++++.+|+|+|..
T Consensus 85 ~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 85 EIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHhhCCCCCEEEeCccc
Confidence 2457889999999863
No 155
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=96.98 E-value=0.028 Score=53.06 Aligned_cols=146 Identities=10% Similarity=-0.064 Sum_probs=97.8
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCCCC----HHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccC
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADGCT----EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 96 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~----~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvd 96 (272)
.|..=--+=..+++++|..+.+.. ...+ .+.+.+.++-|+.- +|+|.+.-|-. -...++-++.
T Consensus 55 pSTRTR~SFe~A~~~LGg~~i~l~--~~~ss~~kgEsl~DTarvls~y--~D~iviR~~~~--~~~~~~a~~s------- 121 (332)
T PRK04284 55 DSTRTRCAFEVAAYDQGAHVTYLG--PTGSQMGKKESTKDTARVLGGM--YDGIEYRGFSQ--RTVETLAEYS------- 121 (332)
T ss_pred CChhHHHHHHHHHHHcCCeEEEcC--CccccCCCCcCHHHHHHHHHHh--CCEEEEecCch--HHHHHHHHhC-------
Confidence 344334456678899999988643 2222 35677778777774 88999876532 2222332221
Q ss_pred ccccccccccccCCCCCccccCCHHHHHHHHHHh-CCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC-----
Q 024103 97 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL----- 169 (272)
Q Consensus 97 g~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~-~~~l~gk~v~ViG~g-~~vG~~la~~L~~~ga~V~v~~~~----- 169 (272)
.+-.+|.+ .+...||=+.+=+--+++. ..+++|++++++|-+ ..|.+.++..|...|++|++++-.
T Consensus 122 ~vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~ 194 (332)
T PRK04284 122 GVPVWNGL-------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFHLVCPKELNPD 194 (332)
T ss_pred CCCEEECC-------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEEEECCccccCC
Confidence 13445531 2346799888844444444 347999999999975 347999999999999999998743
Q ss_pred --------------------CCCHhhhcCCCcEEEEe
Q 024103 170 --------------------TKNPEQITSEADIVIAA 186 (272)
Q Consensus 170 --------------------t~~l~~~l~~ADIVIsa 186 (272)
+.++++.+++||+|.+-
T Consensus 195 ~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~ 231 (332)
T PRK04284 195 DELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD 231 (332)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 14567889999999975
No 156
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.93 E-value=0.00093 Score=61.01 Aligned_cols=72 Identities=26% Similarity=0.237 Sum_probs=54.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------HhhhcCCCcEEEEecCCCc---ccc--CCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------PEQITSEADIVIAAAGVAN---LVR--GSW 197 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~---------------l~~~l~~ADIVIsa~g~p~---~i~--~~~ 197 (272)
+|.|||.|.+ |..++..|.+.|.+|++++++... ..+.+++||+||.+++... .+. ...
T Consensus 2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~ 80 (279)
T PRK07417 2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPA 80 (279)
T ss_pred eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHh
Confidence 6899999885 999999999999999999876321 1245789999999998432 121 134
Q ss_pred cCCCcEEEEeeeC
Q 024103 198 LKPGAVVLDVGTC 210 (272)
Q Consensus 198 vk~g~vviDig~~ 210 (272)
++++++|.|++.-
T Consensus 81 l~~~~ii~d~~Sv 93 (279)
T PRK07417 81 LPPEAIVTDVGSV 93 (279)
T ss_pred CCCCcEEEeCcch
Confidence 6788999999854
No 157
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=96.87 E-value=0.042 Score=53.55 Aligned_cols=150 Identities=13% Similarity=0.029 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcc
Q 024103 22 SQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (272)
Q Consensus 22 s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~---~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~ 98 (272)
|..=--+-..++.++|..+.++.=+.+. ..|-+.+..+-|+.- +|+|.+--| .+-...++-++. .+
T Consensus 137 STRTR~SFE~A~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y--~D~IviR~~--~~~~~~e~A~~s-------~v 205 (429)
T PRK11891 137 STRTRVSFGAAFCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGY--VDALVIRHP--EQGSVAEFARAT-------NL 205 (429)
T ss_pred CchhHHHHHHHHHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHh--CCEEEEeCC--chhHHHHHHHhC-------CC
Confidence 4433445667899999998877421111 124466666666653 788888765 322333333322 13
Q ss_pred ccccccccccCCCCCccccCCHHH-HHHHHHHhCC---CCccceEEEEcCC--cccHHHHHHHHHhC-CCEEEEEeCC--
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV---EIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL-- 169 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~---~l~gk~v~ViG~g--~~vG~~la~~L~~~-ga~V~v~~~~-- 169 (272)
-.+|.| +.+.+.||=+.+ ++.+.++.+. .++|++|+++|-+ +-+.+.++..|... |++|++++-.
T Consensus 206 PVINAg------dg~~~HPtQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~ 279 (429)
T PRK11891 206 PVINGG------DGPGEHPSQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTL 279 (429)
T ss_pred CEEECC------CCCCCCcHHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCcc
Confidence 445542 134577998888 5666666542 4899999999996 34688888887776 9999998632
Q ss_pred -------------------CCCHhhhcCCCcEEEEecC
Q 024103 170 -------------------TKNPEQITSEADIVIAAAG 188 (272)
Q Consensus 170 -------------------t~~l~~~l~~ADIVIsa~g 188 (272)
+.++.+.+++||+|++..+
T Consensus 280 ~~~~~~~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~ 317 (429)
T PRK11891 280 EMPAYIVEQISRNGHVIEQTDDLAAGLRGADVVYATRI 317 (429)
T ss_pred ccCHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCc
Confidence 2467789999999998554
No 158
>PLN02342 ornithine carbamoyltransferase
Probab=96.87 E-value=0.023 Score=53.92 Aligned_cols=148 Identities=14% Similarity=0.067 Sum_probs=99.9
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcc
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~--~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~ 98 (272)
.|..=--+-..++.++|.++.++.-... ...|.+.+.++-|..- +|+|.+--|-.. .++.+... -.+
T Consensus 95 pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y--~D~IviR~~~~~------~~~~la~~---~~v 163 (348)
T PLN02342 95 PSMRTRVSFETGFFLLGGHALYLGPDDIQLGKREETRDIARVLSRY--NDIIMARVFAHQ------DVLDLAEY---SSV 163 (348)
T ss_pred CCcchHHHHHHHHHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHh--CCEEEEeCCChH------HHHHHHHh---CCC
Confidence 3433334556789999999988632110 0235577777777764 789998866332 22222211 123
Q ss_pred ccccccccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC--------
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------- 169 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~-------- 169 (272)
-.+|.+ .+.+.||=+.+ ++.+.++.| +++|++|+++|-+..|.+.++..+...|++|++|+-.
T Consensus 164 PVINA~-------~~~~HPtQaLaDl~Ti~e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~ 235 (348)
T PLN02342 164 PVINGL-------TDYNHPCQIMADALTIIEHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKT 235 (348)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHH
Confidence 455642 23467998888 455555555 7999999999998889999999999999999998632
Q ss_pred --------------CCCHhhhcCCCcEEEEec
Q 024103 170 --------------TKNPEQITSEADIVIAAA 187 (272)
Q Consensus 170 --------------t~~l~~~l~~ADIVIsa~ 187 (272)
+.++.+.++.||+|.+-.
T Consensus 236 ~~~a~~~g~~~~~~~~d~~eav~~aDVvy~~~ 267 (348)
T PLN02342 236 VEKARAAGISKIEITNDPAEAVKGADVVYTDV 267 (348)
T ss_pred HHHHHHhCCCcEEEEcCHHHHhCCCCEEEECC
Confidence 245678899999999763
No 159
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.86 E-value=0.042 Score=51.21 Aligned_cols=149 Identities=13% Similarity=0.183 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCccc
Q 024103 22 SQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 99 (272)
Q Consensus 22 s~~Y~~~~~~~~~~~Gi~~~~~~l~~~--~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~ 99 (272)
|..=--+-..++.++|.++.+..-... ...|-+.+.++-|+.- ++|+|.+--|-. -...++.+. -.+-
T Consensus 56 STRTR~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y-~~D~iv~R~~~~--~~~~~~a~~-------~~vP 125 (305)
T PRK00856 56 STRTRLSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSAM-GADAIVIRHPQS--GAARLLAES-------SDVP 125 (305)
T ss_pred CcchHHHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhc-CCCEEEEeCCCh--HHHHHHHHH-------CCCC
Confidence 544444667889999999876642210 0123455566666541 378888876622 222222222 1234
Q ss_pred cccccccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCCCEEEEEeCC-------
Q 024103 100 PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL------- 169 (272)
Q Consensus 100 ~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g--~~vG~~la~~L~~~ga~V~v~~~~------- 169 (272)
.+|.|. .+.+.||=+.+ ++.+.++.| +++|++|+++|-+ +.+.+.++..+...|+++++++-.
T Consensus 126 VINa~~------g~~~HPtQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~ 198 (305)
T PRK00856 126 VINAGD------GSHQHPTQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGM 198 (305)
T ss_pred EEECCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccc
Confidence 455421 23467998888 566665555 6999999999986 456999999999999999999732
Q ss_pred -----CCCHhhhcCCCcEEEEec
Q 024103 170 -----TKNPEQITSEADIVIAAA 187 (272)
Q Consensus 170 -----t~~l~~~l~~ADIVIsa~ 187 (272)
+.++.+.++.||+|.+..
T Consensus 199 ~~~~~~~d~~ea~~~aDvvyt~~ 221 (305)
T PRK00856 199 PEYGVHTDLDEVIEDADVVMMLR 221 (305)
T ss_pred cceEEECCHHHHhCCCCEEEECC
Confidence 246678999999998754
No 160
>PLN02527 aspartate carbamoyltransferase
Probab=96.84 E-value=0.033 Score=51.97 Aligned_cols=148 Identities=14% Similarity=0.111 Sum_probs=97.7
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCC-CC---CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCc
Q 024103 22 SQTYVRNKIKACEEVGIKSIVTEFAD-GC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 97 (272)
Q Consensus 22 s~~Y~~~~~~~~~~~Gi~~~~~~l~~-~~---~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg 97 (272)
|..=--+-..++.++|..+.+..-.. +. ..|.+.+.++-|+.- +|+|.+--|-.. ...++.++. .
T Consensus 50 StRTR~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~~~~--~~~~~a~~~-------~ 118 (306)
T PLN02527 50 STRTRLSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHFESG--AARRAAATA-------E 118 (306)
T ss_pred CchhHHHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECCChh--HHHHHHHhC-------C
Confidence 44444466788999999998886531 11 135577777777763 789998866332 333332222 1
Q ss_pred cccccccccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC-c-ccHHHHHHHHHhC-CCEEEEEeCC----
Q 024103 98 FHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-N-IVGLPTSLLLQRH-HATVSIVHAL---- 169 (272)
Q Consensus 98 ~~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g-~-~vG~~la~~L~~~-ga~V~v~~~~---- 169 (272)
+-.+|.|. .+.+.||=+.+ ++.+.++.| +++|++|+++|-+ . -+.+.++..|... |++|+++.-.
T Consensus 119 vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~ 191 (306)
T PLN02527 119 IPVINAGD------GPGQHPTQALLDVYTIQREIG-RLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKM 191 (306)
T ss_pred CCEEECCC------CCCCChHHHHHHHHHHHHHhC-CcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 33445421 23467998888 444444554 6999999999976 2 2588888888776 8999988632
Q ss_pred -----------------CCCHhhhcCCCcEEEEec
Q 024103 170 -----------------TKNPEQITSEADIVIAAA 187 (272)
Q Consensus 170 -----------------t~~l~~~l~~ADIVIsa~ 187 (272)
+.++++.++.||+|.+..
T Consensus 192 ~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 226 (306)
T PLN02527 192 KDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTR 226 (306)
T ss_pred CHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence 246789999999999743
No 161
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.82 E-value=0.0028 Score=52.34 Aligned_cols=53 Identities=26% Similarity=0.419 Sum_probs=44.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC------------------------CCHhhhcCCCcEEEEecCCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t------------------------~~l~~~l~~ADIVIsa~g~p 190 (272)
||.|||++|.||..++..|...+. ++.++++.. .+.++.+++|||||.+.|.|
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 799999966679999999998883 788888762 24468899999999999876
No 162
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=96.81 E-value=0.04 Score=51.31 Aligned_cols=146 Identities=11% Similarity=0.062 Sum_probs=97.8
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCc
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 97 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~---~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg 97 (272)
.|..=--+-..++.++|.++.+..- .+. ..|.+.+.++-|+.- +|+|.+--|-. -...++.++. .
T Consensus 48 pSTRTR~SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~~~--~~~~~~a~~~-------~ 115 (302)
T PRK14805 48 PSLRTRVSFDIGINKLGGHCLYLDQ-QNGALGKRESVADFAANLSCW--ADAIVARVFSH--STIEQLAEHG-------S 115 (302)
T ss_pred CCchHHHHHHHHHHHcCCcEEECCC-CcCcCCCCcCHHHHHHHHHHh--CCEEEEeCCCh--hHHHHHHHhC-------C
Confidence 3443344567889999999987642 211 235577777777764 88999886632 2222232221 1
Q ss_pred cccccccccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------
Q 024103 98 FHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------ 170 (272)
Q Consensus 98 ~~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t------ 170 (272)
+-.+|.|. +.+.||=+.+ ++.+.++. .+++|++++++|-+..|.+.++..+...|++|++++-..
T Consensus 116 vPVINa~~-------~~~HPtQaL~Dl~Ti~e~~-g~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~ 187 (302)
T PRK14805 116 VPVINALC-------DLYHPCQALADFLTLAEQF-GDVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQ 187 (302)
T ss_pred CCEEECCC-------CCCChHHHHHHHHHHHHHh-CCcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcCCHH
Confidence 34556422 2367998888 44444444 479999999999988899999999999999999997321
Q ss_pred -------------------CCHhhhcCCCcEEEEec
Q 024103 171 -------------------KNPEQITSEADIVIAAA 187 (272)
Q Consensus 171 -------------------~~l~~~l~~ADIVIsa~ 187 (272)
.++ +.++.||+|.+-+
T Consensus 188 ~~~~a~~~~~~~g~~~~~~~d~-~a~~~aDvvy~~~ 222 (302)
T PRK14805 188 IVAEAQELAAKSGGKLVLTSDI-EAIEGHDAIYTDT 222 (302)
T ss_pred HHHHHHHHHHHcCCEEEEEcCH-HHHCCCCEEEeec
Confidence 232 4588999998743
No 163
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.81 E-value=0.0024 Score=60.50 Aligned_cols=73 Identities=27% Similarity=0.421 Sum_probs=55.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------------CCHhhhcCCCcEEEEecCCCc---cc--
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQITSEADIVIAAAGVAN---LV-- 193 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t------------------~~l~~~l~~ADIVIsa~g~p~---~i-- 193 (272)
++|.|||.|.+ |.+++..|.+.|..|.+..++. .++.+.+++||+||-+++... ++
T Consensus 1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~ 79 (359)
T PRK06545 1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAE 79 (359)
T ss_pred CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHH
Confidence 47999999886 9999999999998877776542 234556789999999998532 22
Q ss_pred -cCCCcCCCcEEEEeeeC
Q 024103 194 -RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 194 -~~~~vk~g~vviDig~~ 210 (272)
.+..++++++|.|++..
T Consensus 80 l~~~~l~~~~ivtDv~Sv 97 (359)
T PRK06545 80 LADLELKPGVIVTDVGSV 97 (359)
T ss_pred HhhcCCCCCcEEEeCccc
Confidence 22247889999999865
No 164
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.79 E-value=0.0089 Score=57.73 Aligned_cols=95 Identities=23% Similarity=0.292 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHhC--CCCccceEEEEcC----------------CcccHHHHHHHHHhCCCEEEEEeCCCC--------
Q 024103 118 CTPKGCIELLIRSG--VEIMGKNAVVIGR----------------SNIVGLPTSLLLQRHHATVSIVHALTK-------- 171 (272)
Q Consensus 118 ~Ta~g~~~~l~~~~--~~l~gk~v~ViG~----------------g~~vG~~la~~L~~~ga~V~v~~~~t~-------- 171 (272)
+.+.-++..+++.- .+++||+++|-|+ ||-+|+++|..|..+|++|+++++...
T Consensus 168 ~~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~ 247 (399)
T PRK05579 168 AEPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVK 247 (399)
T ss_pred CCHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcE
Confidence 45666666655432 4689999999998 675699999999999999999876421
Q ss_pred --------CH----hhhcCCCcEEEEecCCCccc----cCCCcCCC--cEEEEeeeCCC
Q 024103 172 --------NP----EQITSEADIVIAAAGVANLV----RGSWLKPG--AVVLDVGTCPV 212 (272)
Q Consensus 172 --------~l----~~~l~~ADIVIsa~g~p~~i----~~~~vk~g--~vviDig~~~~ 212 (272)
++ .+...+.|++|.+.|...+- ...-+|++ ...+.+--+|+
T Consensus 248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pd 306 (399)
T PRK05579 248 RIDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPD 306 (399)
T ss_pred EEccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcH
Confidence 11 23346789999888854432 22334443 35567766664
No 165
>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.78 E-value=0.054 Score=50.67 Aligned_cols=147 Identities=10% Similarity=0.031 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC----CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCc
Q 024103 22 SQTYVRNKIKACEEVGIKSIVTEFADGC----TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 97 (272)
Q Consensus 22 s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~----~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg 97 (272)
|..=--+=..++.++|..+.+. .... ..|-+.+.++-|+.- .+++|.+--| .+-...++.+.+ ..
T Consensus 56 STRTR~SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~y-~~D~iv~R~~--~~~~~~~~a~~~------~~ 124 (310)
T PRK13814 56 STRTRNSFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEAM-GVYFFIVRHS--ENETPEQIAKQL------SS 124 (310)
T ss_pred cchhHHHHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHHh-CCCEEEEeCC--chhHHHHHHHhC------CC
Confidence 3333335567888999977764 3221 124466666666652 3578877655 322223332322 12
Q ss_pred cccccccccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCCC-EEEEEeCC-----
Q 024103 98 FHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHA-TVSIVHAL----- 169 (272)
Q Consensus 98 ~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g--~~vG~~la~~L~~~ga-~V~v~~~~----- 169 (272)
+-++|.| +.+.+.||=+.+=+--+++...+++|++++++|-+ +.+.+.++..+...|. +|++++-.
T Consensus 125 vPvINag------~g~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~~p~ 198 (310)
T PRK13814 125 GVVINAG------DGNHQHPSQALIDLMTIKQHKPHWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSLLPD 198 (310)
T ss_pred CCeEECC------cCCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCcccCcC
Confidence 3445542 24567799888844444444346999999999986 4569999999999998 89998633
Q ss_pred ---------CCCHhhhcCCCcEEEE
Q 024103 170 ---------TKNPEQITSEADIVIA 185 (272)
Q Consensus 170 ---------t~~l~~~l~~ADIVIs 185 (272)
+.++.+.++.||+|.+
T Consensus 199 ~~~~~~~~~~~d~~ea~~~aDvvy~ 223 (310)
T PRK13814 199 KVGNDSIKKFTELKPSLLNSDVIVT 223 (310)
T ss_pred ccccceEEEEcCHHHHhCCCCEEEE
Confidence 2567889999999986
No 166
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.77 E-value=0.0029 Score=59.61 Aligned_cols=70 Identities=21% Similarity=0.219 Sum_probs=53.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCc---cccC-
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN---LVRG- 195 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~---~i~~- 195 (272)
++||+|.|||.|.+ |++++..|...|.+|++..+.. .+..+.+++||+|+.+++... ++..
T Consensus 15 L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~ 93 (330)
T PRK05479 15 IKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE 93 (330)
T ss_pred hCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence 68999999999985 9999999999999998876542 245678899999999998322 2311
Q ss_pred --CCcCCCcEE
Q 024103 196 --SWLKPGAVV 204 (272)
Q Consensus 196 --~~vk~g~vv 204 (272)
..+++|+++
T Consensus 94 I~~~Lk~g~iL 104 (330)
T PRK05479 94 IEPNLKEGAAL 104 (330)
T ss_pred HHhcCCCCCEE
Confidence 246777655
No 167
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=96.75 E-value=0.038 Score=51.48 Aligned_cols=156 Identities=15% Similarity=0.188 Sum_probs=102.6
Q ss_pred eEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHh
Q 024103 10 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILD 87 (272)
Q Consensus 10 ~Laii~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~--~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~ 87 (272)
|.+..++=+ .|..=--+-..+++++|.++.++.-... ...|.+.+.++-|+.- +|+|.+--|-.. ....+.+
T Consensus 40 k~v~~lF~e--pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~~--~~~~~a~ 113 (304)
T TIGR00658 40 KTLALIFEK--PSTRTRVSFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKHE--DVEELAK 113 (304)
T ss_pred CEEEEEecC--CCcchHHHHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCChH--HHHHHHH
Confidence 344444432 3333334557889999999987743211 0135577777777764 788988866332 2222322
Q ss_pred cCCcccccCccccccccccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024103 88 AVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (272)
Q Consensus 88 ~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~ 166 (272)
.. .+-.+|.| .....||=+.+ ++.+.++.| .++|.+|+++|-...+.+.++..|...|++|+++
T Consensus 114 ~~-------~vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~ 178 (304)
T TIGR00658 114 YA-------SVPVINGL-------TDLFHPCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVA 178 (304)
T ss_pred hC-------CCCEEECC-------CCCCChHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEE
Confidence 22 13445642 13467998888 445545554 5999999999996678999999999999999999
Q ss_pred eCC-------------------------CCCHhhhcCCCcEEEEe
Q 024103 167 HAL-------------------------TKNPEQITSEADIVIAA 186 (272)
Q Consensus 167 ~~~-------------------------t~~l~~~l~~ADIVIsa 186 (272)
+-. +.++++.+++||+|.+-
T Consensus 179 ~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 223 (304)
T TIGR00658 179 TPEGYEPDADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTD 223 (304)
T ss_pred CCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 732 13567889999999974
No 168
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.73 E-value=0.003 Score=60.43 Aligned_cols=75 Identities=19% Similarity=0.231 Sum_probs=58.1
Q ss_pred ccceEEEEcC-CcccHHHHHHHHHhC-CCEEEEEeCCC---CCHhhhcCCCcEEEEecCCCc---ccc---C--CCcCCC
Q 024103 135 MGKNAVVIGR-SNIVGLPTSLLLQRH-HATVSIVHALT---KNPEQITSEADIVIAAAGVAN---LVR---G--SWLKPG 201 (272)
Q Consensus 135 ~gk~v~ViG~-g~~vG~~la~~L~~~-ga~V~v~~~~t---~~l~~~l~~ADIVIsa~g~p~---~i~---~--~~vk~g 201 (272)
.-.+|+|||. |. +|..++..|.+. +.+|+.+++.. .++.+.+++||+||-|++... ++. + .+++++
T Consensus 3 ~~~~I~IIGl~Gl-iGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~~~~~~l~~l~~~~~~l~~~ 81 (370)
T PRK08818 3 AQPVVGIVGSAGA-YGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIRHTAALIEEYVALAGGRAAG 81 (370)
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHHHHHHHHHHHhhhhcCCCCC
Confidence 4578999999 55 599999999975 67888887642 356788999999999998533 232 1 237999
Q ss_pred cEEEEeeeC
Q 024103 202 AVVLDVGTC 210 (272)
Q Consensus 202 ~vviDig~~ 210 (272)
++|.|+|..
T Consensus 82 ~iVtDVgSv 90 (370)
T PRK08818 82 QLWLDVTSI 90 (370)
T ss_pred eEEEECCCC
Confidence 999999975
No 169
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.73 E-value=0.0028 Score=58.07 Aligned_cols=69 Identities=22% Similarity=0.316 Sum_probs=54.2
Q ss_pred EEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCcc----cc--C---CC
Q 024103 141 VIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VR--G---SW 197 (272)
Q Consensus 141 ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~~----i~--~---~~ 197 (272)
+||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+.. +. . ..
T Consensus 1 ~IGlG~m-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~ 79 (288)
T TIGR01692 1 FIGLGNM-GGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPK 79 (288)
T ss_pred CCcccHh-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhc
Confidence 4799886 9999999999999999998863 3567788999999999986442 21 1 24
Q ss_pred cCCCcEEEEeeeC
Q 024103 198 LKPGAVVLDVGTC 210 (272)
Q Consensus 198 vk~g~vviDig~~ 210 (272)
+++|.++||....
T Consensus 80 ~~~g~~vid~st~ 92 (288)
T TIGR01692 80 VAKGSLLIDCSTI 92 (288)
T ss_pred CCCCCEEEECCCC
Confidence 5778999998854
No 170
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.73 E-value=0.0036 Score=61.50 Aligned_cols=128 Identities=16% Similarity=0.163 Sum_probs=72.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcC-CCcEEEEeeeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCP 211 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk-~g~vviDig~~~ 211 (272)
.+.+|+|+|+|.|++ |++++.+|.++|++|++++++.....+.+.+..+.+..-+.+ ++++. ...+|+--|+++
T Consensus 12 ~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~----~~~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 12 QELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA----SDQLDSFSLVVTSPGWRP 86 (473)
T ss_pred cccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc----hhHhcCCCEEEeCCCCCC
Confidence 468899999999997 999999999999999999875432222222222222111011 11222 134555555554
Q ss_pred CCCCCCCCCCCCceEecccchhhhhh------hceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 212 VDVSVDPSCEYGYRLMGDVCYEEAMR------LASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 212 ~~~~~~~~~~~~~k~~Gdvd~~~~~~------~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
...........+-++.|++++..... ....+--|-|--|.=|+.-|+.++++..
T Consensus 87 ~~p~~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~ 146 (473)
T PRK00141 87 DSPLLVDAQSQGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEG 146 (473)
T ss_pred CCHHHHHHHHCCCceeeHHHHHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhc
Confidence 32000000001235777777532110 0111223568889999999999988753
No 171
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.71 E-value=0.002 Score=51.50 Aligned_cols=74 Identities=24% Similarity=0.274 Sum_probs=51.1
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC-CE-EEEEeCCC---CCH-------------------hhhcCCCcEEEEecCCC--c
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHH-AT-VSIVHALT---KNP-------------------EQITSEADIVIAAAGVA--N 191 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~g-a~-V~v~~~~t---~~l-------------------~~~l~~ADIVIsa~g~p--~ 191 (272)
||.|+|+.|.+|+.++.+|.++- ++ +.++.++. +.+ .+.+.++|+||.|++.- .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 68999988889999999999854 34 44444433 111 23468999999999842 1
Q ss_pred cccCCCcCCCcEEEEeeeCC
Q 024103 192 LVRGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 192 ~i~~~~vk~g~vviDig~~~ 211 (272)
-+-+..++.|..|||.+...
T Consensus 81 ~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 81 ELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp HHHHHHHHTTSEEEESSSTT
T ss_pred HHHHHHhhCCcEEEeCCHHH
Confidence 23334578899999998765
No 172
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.70 E-value=0.0042 Score=57.31 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=55.6
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCcEEEEecCCCc----cc-cCC---
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVAN----LV-RGS--- 196 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l~~ADIVIsa~g~p~----~i-~~~--- 196 (272)
+|.+||.|.+ |.+++..|.+.|..|++++++. .+..+..++||+||.+++.+. .+ ..+
T Consensus 2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 5899999986 9999999999999999998753 244567789999999998543 12 221
Q ss_pred -CcCCCcEEEEeeeC
Q 024103 197 -WLKPGAVVLDVGTC 210 (272)
Q Consensus 197 -~vk~g~vviDig~~ 210 (272)
..++|.++||++..
T Consensus 81 ~~~~~g~ivvd~sT~ 95 (292)
T PRK15059 81 KASLKGKTIVDMSSI 95 (292)
T ss_pred ccCCCCCEEEECCCC
Confidence 24778999998754
No 173
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=96.69 E-value=0.072 Score=49.63 Aligned_cols=147 Identities=13% Similarity=0.128 Sum_probs=97.9
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcc
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~--~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~ 98 (272)
.|..=--+-..+++++|.++.++.-... ...|.+.+.++-|+.- +|+|.+.-|-.. ...++.+. -.+
T Consensus 53 ~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~~~~--~~~~~a~~-------~~v 121 (304)
T PRK00779 53 PSTRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTFEHE--TLEELAEY-------STV 121 (304)
T ss_pred CCchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCCChh--HHHHHHHh-------CCC
Confidence 3444344567899999999887743211 0134577777777764 788888766322 22222222 124
Q ss_pred ccccccccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------
Q 024103 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------- 170 (272)
Q Consensus 99 ~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t------- 170 (272)
-.+|.|. +...||=+.+ +..+.++.| .++|++++++|-..-+.+.++..|...|++|++|+-..
T Consensus 122 PVINag~-------~~~HPtQaL~Dl~Ti~e~~g-~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~ 193 (304)
T PRK00779 122 PVINGLT-------DLSHPCQILADLLTIYEHRG-SLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEI 193 (304)
T ss_pred CEEeCCC-------CCCChHHHHHHHHHHHHHhC-CcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHH
Confidence 5566532 2356887777 444444454 69999999999966679999999999999999996321
Q ss_pred ---------------CCHhhhcCCCcEEEEe
Q 024103 171 ---------------KNPEQITSEADIVIAA 186 (272)
Q Consensus 171 ---------------~~l~~~l~~ADIVIsa 186 (272)
.++++.+++||+|.+-
T Consensus 194 ~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 224 (304)
T PRK00779 194 VEKIAKETGASIEVTHDPKEAVKGADVVYTD 224 (304)
T ss_pred HHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 4567889999999975
No 174
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=96.68 E-value=0.0053 Score=57.85 Aligned_cols=76 Identities=20% Similarity=0.342 Sum_probs=61.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCC---------------------CCHhhhcCCCcEEEEecCCCc
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~g--a~V~v~~~~t---------------------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
.-+.+.|||+|.- ++.-++.+...- -+|.|..|+. .+.++.++.|||||++|....
T Consensus 129 da~~laiIGaG~q-A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~ 207 (330)
T COG2423 129 DASTLAIIGAGAQ-ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTE 207 (330)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCC
Confidence 4578999999885 988887776543 3788888763 456789999999999999544
Q ss_pred -cccCCCcCCCcEEEEeeeCC
Q 024103 192 -LVRGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 192 -~i~~~~vk~g~vviDig~~~ 211 (272)
+++.+|++||+.|.-+|.+.
T Consensus 208 Pil~~~~l~~G~hI~aiGad~ 228 (330)
T COG2423 208 PVLKAEWLKPGTHINAIGADA 228 (330)
T ss_pred CeecHhhcCCCcEEEecCCCC
Confidence 68999999999999999653
No 175
>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=96.68 E-value=0.039 Score=52.59 Aligned_cols=150 Identities=16% Similarity=0.069 Sum_probs=95.1
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCccEEEEcCCCC---CCCCHHHHHhcCC-cccc-cC--
Q 024103 27 RNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLP---QHLDEGKILDAVS-LEKD-VD-- 96 (272)
Q Consensus 27 ~~~~~~~~~~Gi~~~~~~l~~~~---~~~el~~~i~~ln~d~~v~Gi~vq~Plp---~~~~~~~i~~~i~-p~KD-vd-- 96 (272)
-+-..++.++|.++.++.- .+. ..|-+.+.++-|+.- +|+|.+-.|-. .+-...++.+... .-|| |.
T Consensus 58 ~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~~~a~~~~~~~~~~~~~s 134 (357)
T TIGR03316 58 FSFASAMNLLGLHAQDLDE-GKSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMREVAKYVQEGYKDGVLEQ 134 (357)
T ss_pred HHHHHHHHHcCCcEEEeCC-ccccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHHHHHHhhhhccccccccC
Confidence 3556788999999988763 221 135577777777763 78999887642 1111122333311 1122 00
Q ss_pred ccccccccccccCCCCCccccCCHHH-HHHHHHHhCC--CCccceEEEEcCC-------cccHHHHHHHHHhCCCEEEEE
Q 024103 97 GFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV--EIMGKNAVVIGRS-------NIVGLPTSLLLQRHHATVSIV 166 (272)
Q Consensus 97 g~~~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~--~l~gk~v~ViG~g-------~~vG~~la~~L~~~ga~V~v~ 166 (272)
.+-.+|.| .+.+.||=+.+ ++.+.++.|. +++|++++++|.| ..|.+.++.++...|++|+++
T Consensus 135 ~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~~Sl~~~~~~~G~~v~~~ 207 (357)
T TIGR03316 135 RPPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLA 207 (357)
T ss_pred CCCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEE
Confidence 12344542 23477998888 5555566663 4899999999742 356788888899999999999
Q ss_pred eCC-------------------------CCCHhhhcCCCcEEEEe
Q 024103 167 HAL-------------------------TKNPEQITSEADIVIAA 186 (272)
Q Consensus 167 ~~~-------------------------t~~l~~~l~~ADIVIsa 186 (272)
+-. +.++.+.+++||+|.+-
T Consensus 208 ~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 252 (357)
T TIGR03316 208 HPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPK 252 (357)
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 743 13556888999998865
No 176
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.66 E-value=0.0044 Score=56.53 Aligned_cols=72 Identities=11% Similarity=0.224 Sum_probs=53.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC----CEEEEEeCCC----------------CCHhhhcCCCcEEEEecCCCcc--
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL-- 192 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~g----a~V~v~~~~t----------------~~l~~~l~~ADIVIsa~g~p~~-- 192 (272)
++.++.+||.|.+ |.+++..|.+.| .+|++++|+. .+..+.+++||+||.++....+
T Consensus 2 ~~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~ 80 (279)
T PRK07679 2 SIQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAE 80 (279)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHH
Confidence 3468999999886 999999999987 5789998753 1334567899999999984332
Q ss_pred -cc--CCCcCCCcEEEEe
Q 024103 193 -VR--GSWLKPGAVVLDV 207 (272)
Q Consensus 193 -i~--~~~vk~g~vviDi 207 (272)
+. ...++++.+|||+
T Consensus 81 vl~~l~~~~~~~~liIs~ 98 (279)
T PRK07679 81 ALIPFKEYIHNNQLIISL 98 (279)
T ss_pred HHHHHHhhcCCCCEEEEE
Confidence 21 1346778899997
No 177
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.66 E-value=0.0047 Score=56.97 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=55.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCC---CcEEEEecCCCc----ccc--
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSE---ADIVIAAAGVAN----LVR-- 194 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~---ADIVIsa~g~p~----~i~-- 194 (272)
++.+||.|.+ |.+++..|.+.|.+|++++++. .+.++..++ +|+||++++.+. .+.
T Consensus 2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i 80 (299)
T PRK12490 2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDL 80 (299)
T ss_pred EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHH
Confidence 6899999986 9999999999999999999863 244555554 699999998652 121
Q ss_pred CCCcCCCcEEEEeeeC
Q 024103 195 GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 195 ~~~vk~g~vviDig~~ 210 (272)
...+++|.++||++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 1235788999999654
No 178
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=96.66 E-value=0.006 Score=61.16 Aligned_cols=94 Identities=13% Similarity=0.227 Sum_probs=76.0
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh-----CCC-------EEEEEeCCC--------------
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-----HHA-------TVSIVHALT-------------- 170 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~-----~ga-------~V~v~~~~t-------------- 170 (272)
-++..|++..++-.+.+++..+++++|+|.+ |..++.+|.. .|. .+++++++-
T Consensus 302 aV~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k 380 (581)
T PLN03129 302 AVALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFK 380 (581)
T ss_pred HHHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHH
Confidence 4455778999999999999999999999998 9999998876 465 688887641
Q ss_pred ----------CCHhhhcCC--CcEEEEecCCCccccCCCcC------CCcEEEEeeeCCC
Q 024103 171 ----------KNPEQITSE--ADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 212 (272)
Q Consensus 171 ----------~~l~~~l~~--ADIVIsa~g~p~~i~~~~vk------~g~vviDig~~~~ 212 (272)
.+|.+.++. +|++|-+.+.|+.+++++++ +.-+|+=+. ||.
T Consensus 381 ~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~~rPIIFaLS-NPt 439 (581)
T PLN03129 381 KPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIFALS-NPT 439 (581)
T ss_pred HHHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 357788888 89999999888999998885 456777776 554
No 179
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.65 E-value=0.0036 Score=60.65 Aligned_cols=73 Identities=26% Similarity=0.307 Sum_probs=54.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------Hhhh---------------cCCCcEEEEe
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------PEQI---------------TSEADIVIAA 186 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~---------------l~~~---------------l~~ADIVIsa 186 (272)
++|.|||.|.+ |.++|..|++.|.+|+.++++... +.+. .++||+||.+
T Consensus 4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999885 999999999999999999876421 2222 3479999999
Q ss_pred cCCC---------cccc------CCCcCCCcEEEEeeeC
Q 024103 187 AGVA---------NLVR------GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 187 ~g~p---------~~i~------~~~vk~g~vviDig~~ 210 (272)
++.| ..+. ...+++|++||+...-
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv 121 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTS 121 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence 9976 1121 1245788888887653
No 180
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.65 E-value=0.0044 Score=57.46 Aligned_cols=53 Identities=23% Similarity=0.353 Sum_probs=43.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCCC------------------------CHhhhcCCCcEEEEecCCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK------------------------NPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~g--a~V~v~~~~t~------------------------~l~~~l~~ADIVIsa~g~p 190 (272)
+||.|||+|+ ||++++..|+.+| .++++++++.+ .-.+.+++||+||.++|.|
T Consensus 1 ~kI~IIGaG~-vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~ 79 (306)
T cd05291 1 RKVVIIGAGH-VGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence 4899999988 5999999999999 37999987531 1135578999999999976
No 181
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.65 E-value=0.0044 Score=59.95 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++|+|+|+|.|. +|++++..|+++|++|++++++.
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 46899999999999 59999999999999999998864
No 182
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=96.64 E-value=0.0088 Score=59.75 Aligned_cols=95 Identities=15% Similarity=0.209 Sum_probs=74.6
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----CCC-------EEEEEeCCC--------------
Q 024103 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHALT-------------- 170 (272)
Q Consensus 116 ~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~----~ga-------~V~v~~~~t-------------- 170 (272)
--++..|++..++-.+.+++.-+++++|+|.+ |..++.+|.. .|. .+++++++-
T Consensus 277 aaV~lAgll~Alr~~g~~l~d~riv~~GAGsA-giGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k 355 (559)
T PTZ00317 277 GAVIAAGFLNALKLSGVPPEEQRIVFFGAGSA-AIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHK 355 (559)
T ss_pred HHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHH
Confidence 34566788999999999999999999999998 9999998873 676 688887540
Q ss_pred ---------------CCHhhhcCCC--cEEEEecCCCccccCCCcC------CCcEEEEeeeCCC
Q 024103 171 ---------------KNPEQITSEA--DIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 212 (272)
Q Consensus 171 ---------------~~l~~~l~~A--DIVIsa~g~p~~i~~~~vk------~g~vviDig~~~~ 212 (272)
.+|.+.++.+ |++|-+.+.|+.+++++++ +.-+|+=+. ||.
T Consensus 356 ~~fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft~evv~~Ma~~~~rPIIFaLS-NPt 419 (559)
T PTZ00317 356 VPFARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFTEEVVKTMASNVERPIIFPLS-NPT 419 (559)
T ss_pred HHHhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 1477788888 9999988888888888874 345666665 443
No 183
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.63 E-value=0.004 Score=56.97 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=53.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------------------CCHhhhcC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------------KNPEQITS 178 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------------------------------~~l~~~l~ 178 (272)
++|.|||.|.+ |.++|..|++.|.+|++++++. .++.+.++
T Consensus 2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 57999999885 9999999999999999997642 23456789
Q ss_pred CCcEEEEecCCCcc-----cc--CCCcCCCcEE-EEeee
Q 024103 179 EADIVIAAAGVANL-----VR--GSWLKPGAVV-LDVGT 209 (272)
Q Consensus 179 ~ADIVIsa~g~p~~-----i~--~~~vk~g~vv-iDig~ 209 (272)
+||+||.+++...- +. .+.+++++++ +|...
T Consensus 81 ~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt 119 (288)
T PRK09260 81 DADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTST 119 (288)
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 99999999985421 11 1345677654 55554
No 184
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.58 E-value=0.0038 Score=52.30 Aligned_cols=51 Identities=27% Similarity=0.296 Sum_probs=43.7
Q ss_pred EEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CHhhhcCCCcEEEEecCC
Q 024103 139 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQITSEADIVIAAAGV 189 (272)
Q Consensus 139 v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------------~l~~~l~~ADIVIsa~g~ 189 (272)
|+|+|++|.+|+.++..|.++|.+|+.+.|+.. .+.+.++.+|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 689999888999999999999999999988742 235678899999999884
No 185
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.58 E-value=0.0052 Score=59.97 Aligned_cols=71 Identities=21% Similarity=0.343 Sum_probs=55.1
Q ss_pred eEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCCC---------------CHhhhcCCCcEEEEecCCCc---ccc--CC
Q 024103 138 NAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITSEADIVIAAAGVAN---LVR--GS 196 (272)
Q Consensus 138 ~v~ViG-~g~~vG~~la~~L~~~ga~V~v~~~~t~---------------~l~~~l~~ADIVIsa~g~p~---~i~--~~ 196 (272)
++.||| .|. +|..++..|.+.|..|+++.++.+ +..+.+.+||+||.+++... .+. ..
T Consensus 2 kI~IIGG~G~-mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~~l~~ 80 (437)
T PRK08655 2 KISIIGGTGG-LGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIKEVAP 80 (437)
T ss_pred EEEEEecCCH-HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHHHHHh
Confidence 689998 566 599999999999999999987632 34566789999999998532 221 23
Q ss_pred CcCCCcEEEEeee
Q 024103 197 WLKPGAVVLDVGT 209 (272)
Q Consensus 197 ~vk~g~vviDig~ 209 (272)
+++++++|+|++.
T Consensus 81 ~l~~~~iViDvsS 93 (437)
T PRK08655 81 HVKEGSLLMDVTS 93 (437)
T ss_pred hCCCCCEEEEccc
Confidence 5788999999996
No 186
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=96.58 E-value=0.051 Score=51.41 Aligned_cols=144 Identities=15% Similarity=0.047 Sum_probs=92.1
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCccccccc
Q 024103 27 RNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNI 103 (272)
Q Consensus 27 ~~~~~~~~~~Gi~~~~~~l~~~~---~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~~~n~ 103 (272)
-+=..++.++|..+.+..=+.+. ..|.+.+..+-|+.- +|+|.+--|-.. ...++.++. .+-.+|.
T Consensus 60 ~SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~~~~--~~~~~a~~~-------~vPVINa 128 (338)
T PRK08192 60 VSFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHPDAG--SVKEFAEGS-------RVPVING 128 (338)
T ss_pred HHHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCCchh--HHHHHHHhC-------CCCEEEC
Confidence 35567899999998864211111 234567777777764 789998866332 223332221 1334454
Q ss_pred cccccCCCCCccccCCHHH-HHHHHHHh---CCCCccceEEEEcCC--cccHHHHHHHHHhC-CCEEEEEeCC-------
Q 024103 104 GNLAMRGREPLFIPCTPKG-CIELLIRS---GVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL------- 169 (272)
Q Consensus 104 g~l~~~~~~~~~~p~Ta~g-~~~~l~~~---~~~l~gk~v~ViG~g--~~vG~~la~~L~~~-ga~V~v~~~~------- 169 (272)
|. .+.+.||=+.+ ++.+.++. |-+++|++++++|-+ +-+.+.++..|... |++|++++-.
T Consensus 129 ~~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~ 202 (338)
T PRK08192 129 GD------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDY 202 (338)
T ss_pred CC------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHH
Confidence 21 13467998888 55555543 347999999999996 34577777766634 8999888632
Q ss_pred --------------CCCHhhhcCCCcEEEEec
Q 024103 170 --------------TKNPEQITSEADIVIAAA 187 (272)
Q Consensus 170 --------------t~~l~~~l~~ADIVIsa~ 187 (272)
+.++++.+++||+|++..
T Consensus 203 ~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~ 234 (338)
T PRK08192 203 VISDIENAGHKITITDQLEGNLDKADILYLTR 234 (338)
T ss_pred HHHHHHHcCCeEEEEcCHHHHHccCCEEEEcC
Confidence 146678999999999853
No 187
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.57 E-value=0.0043 Score=56.73 Aligned_cols=72 Identities=18% Similarity=0.274 Sum_probs=52.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC----EEEEEeCCC---------------CCHhhhcCCCcEEEEecCCCcc----c
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHA----TVSIVHALT---------------KNPEQITSEADIVIAAAGVANL----V 193 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga----~V~v~~~~t---------------~~l~~~l~~ADIVIsa~g~p~~----i 193 (272)
+++.+||.|.+ |.+++..|.+.|. +|++++++. .+..+.+++||+||.++. |.. +
T Consensus 3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavk-P~~~~~vl 80 (272)
T PRK12491 3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIK-PDLYSSVI 80 (272)
T ss_pred CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeC-hHHHHHHH
Confidence 47999999886 9999999998873 688888653 233456788999999998 432 2
Q ss_pred c--CCCcCCCcEEEEeeeC
Q 024103 194 R--GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 194 ~--~~~vk~g~vviDig~~ 210 (272)
. ...++++.+|||+.--
T Consensus 81 ~~l~~~~~~~~lvISi~AG 99 (272)
T PRK12491 81 NQIKDQIKNDVIVVTIAAG 99 (272)
T ss_pred HHHHHhhcCCcEEEEeCCC
Confidence 1 1235677888888643
No 188
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.54 E-value=0.0042 Score=57.85 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=55.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------CCHhhhcCCCcEEEEecC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAG 188 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t----------------------------~~l~~~l~~ADIVIsa~g 188 (272)
.+|.|||.|.+ |.+++..|.+.|.+|++.+|+. .++.+.++++|+||.++.
T Consensus 5 m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~ 83 (328)
T PRK14618 5 MRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP 83 (328)
T ss_pred CeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence 57999999886 9999999999999999998752 134456788999999998
Q ss_pred CCcccc-CCCcCCCcEEEEeee
Q 024103 189 VANLVR-GSWLKPGAVVLDVGT 209 (272)
Q Consensus 189 ~p~~i~-~~~vk~g~vviDig~ 209 (272)
...+-. -+.++++.+++++..
T Consensus 84 ~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 84 SKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred hHHHHHHHHhcCcCCEEEEEee
Confidence 654311 134677888998864
No 189
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.50 E-value=0.0045 Score=57.10 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=54.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------CH---hhhcCCCcEEEEecCCCc---ccc--C
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NP---EQITSEADIVIAAAGVAN---LVR--G 195 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~--------------~l---~~~l~~ADIVIsa~g~p~---~i~--~ 195 (272)
+|.|||.|.+ |.+++..|.+.|.+|++.+|+.. ++ .+.+.++|+||.+++... .++ .
T Consensus 2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLEELA 80 (298)
T ss_pred EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHHHHH
Confidence 6899999886 99999999999999999988631 22 234567899999988642 121 1
Q ss_pred CCcCCCcEEEEeeeC
Q 024103 196 SWLKPGAVVLDVGTC 210 (272)
Q Consensus 196 ~~vk~g~vviDig~~ 210 (272)
..+++|.+|||.+..
T Consensus 81 ~~l~~g~ivid~st~ 95 (298)
T TIGR00872 81 PTLEKGDIVIDGGNS 95 (298)
T ss_pred hhCCCCCEEEECCCC
Confidence 346788999998765
No 190
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=96.50 E-value=0.0062 Score=56.99 Aligned_cols=55 Identities=20% Similarity=0.249 Sum_probs=44.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~ 189 (272)
++||++.|||.|.+ |.+++..|.+.|.+|++..+.. .+..+.+++||+|+.+++-
T Consensus 1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp 69 (314)
T TIGR00465 1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPD 69 (314)
T ss_pred CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCc
Confidence 57999999999986 9999999999998877654332 1345678999999999984
No 191
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.47 E-value=0.0076 Score=53.81 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=44.2
Q ss_pred cccCCHHHHHHHHH----HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeC
Q 024103 115 FIPCTPKGCIELLI----RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA 168 (272)
Q Consensus 115 ~~p~Ta~g~~~~l~----~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~-v~~~ 168 (272)
-.|.|++|+...++ +.+.+++|++|+|.|.|. ||+.++.+|.+.|++|+ |+++
T Consensus 6 ~~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~-VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 6 REEATGRGVAYATREALKKLGIGLAGARVAIQGFGN-VGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccchHHHHHHHHHHHHhcCCCccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 34789998766654 556789999999999988 59999999999999887 7766
No 192
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=96.46 E-value=0.0077 Score=54.76 Aligned_cols=54 Identities=20% Similarity=0.159 Sum_probs=44.6
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeCC
Q 024103 115 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHAL 169 (272)
Q Consensus 115 ~~p~Ta~g~~~~----l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~-v~~~~ 169 (272)
-.+.|++|++.. +++.+.+++|++|+|-|.|. ||+.++.+|.++|++|+ |++++
T Consensus 13 R~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~e~GakvvaVsD~~ 71 (254)
T cd05313 13 RPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGN-VAQYAAEKLLELGAKVVTLSDSK 71 (254)
T ss_pred CCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCC
Confidence 347888886655 45568899999999999988 59999999999999877 77643
No 193
>PRK06199 ornithine cyclodeaminase; Validated
Probab=96.46 E-value=0.006 Score=58.50 Aligned_cols=75 Identities=23% Similarity=0.324 Sum_probs=58.4
Q ss_pred ccceEEEEcCCcccHHHHHHHHHh-C-C-CEEEEEeCCC-----------------------CCHhhhcCCCcEEEEecC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQR-H-H-ATVSIVHALT-----------------------KNPEQITSEADIVIAAAG 188 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~-~-g-a~V~v~~~~t-----------------------~~l~~~l~~ADIVIsa~g 188 (272)
.-+++.|||+|.- ++.-+..++. + + .+|.+.+|+. .+.++.+++||||+++|+
T Consensus 154 da~~l~iiG~G~Q-A~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~ 232 (379)
T PRK06199 154 DSKVVGLLGPGVM-GKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNS 232 (379)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccC
Confidence 4588999999886 9988888776 3 2 4899988762 235677899999999997
Q ss_pred CC-------ccccCCCcCCCcEEEEeeeC
Q 024103 189 VA-------NLVRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 189 ~p-------~~i~~~~vk~g~vviDig~~ 210 (272)
.. .+++.+|+++|+.|+=+|..
T Consensus 233 s~~~~~s~~Pv~~~~~lkpG~hv~~ig~~ 261 (379)
T PRK06199 233 GETGDPSTYPYVKREWVKPGAFLLMPAAC 261 (379)
T ss_pred CCCCCCCcCcEecHHHcCCCcEEecCCcc
Confidence 42 35899999999988777654
No 194
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.43 E-value=0.0085 Score=55.27 Aligned_cols=72 Identities=19% Similarity=0.270 Sum_probs=54.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCC---CcEEEEecCCCcc----cc--
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSE---ADIVIAAAGVANL----VR-- 194 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~---ADIVIsa~g~p~~----i~-- 194 (272)
+|.+||.|.+ |.+++..|.+.|.+|++++++. .+..+.++. +|+||++++.+.. +.
T Consensus 2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~l 80 (301)
T PRK09599 2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDEL 80 (301)
T ss_pred EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHHH
Confidence 6899999886 9999999999999999999863 234444544 6999999886521 21
Q ss_pred CCCcCCCcEEEEeeeC
Q 024103 195 GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 195 ~~~vk~g~vviDig~~ 210 (272)
...+++|.++||.+..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (301)
T PRK09599 81 APLLSPGDIVIDGGNS 96 (301)
T ss_pred HhhCCCCCEEEeCCCC
Confidence 1346778899998654
No 195
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.42 E-value=0.0063 Score=52.24 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=26.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+|.|||+|.+ |+.++.+++..|..|++++++
T Consensus 1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~ 31 (180)
T PF02737_consen 1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRS 31 (180)
T ss_dssp EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SS
T ss_pred CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECC
Confidence 6899999886 999999999999999999865
No 196
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.40 E-value=0.007 Score=55.71 Aligned_cols=74 Identities=20% Similarity=0.342 Sum_probs=55.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------CCHhhhcCCCcEEEEecC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAG 188 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t----------------------------~~l~~~l~~ADIVIsa~g 188 (272)
.+|.|||.|.+ |.+++..|++.|.+|++++++. .+..+.++++|+||.++.
T Consensus 2 mkI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 37999999885 9999999999999999998752 133456679999999998
Q ss_pred CCcc---cc--CCCcCCCcEEEEe--eeCC
Q 024103 189 VANL---VR--GSWLKPGAVVLDV--GTCP 211 (272)
Q Consensus 189 ~p~~---i~--~~~vk~g~vviDi--g~~~ 211 (272)
.... +. ..+++++.++|++ |+.+
T Consensus 81 ~~~~~~v~~~l~~~~~~~~~vi~~~ngv~~ 110 (325)
T PRK00094 81 SQALREVLKQLKPLLPPDAPIVWATKGIEP 110 (325)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEeecccC
Confidence 6431 21 1245778899998 4443
No 197
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=96.40 E-value=0.006 Score=59.50 Aligned_cols=123 Identities=21% Similarity=0.152 Sum_probs=72.8
Q ss_pred CccceEEEEcCCcccHHH-HHHHHHhCCCEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcC-CCcEEEEeeeCC
Q 024103 134 IMGKNAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCP 211 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~-la~~L~~~ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk-~g~vviDig~~~ 211 (272)
.++|+++|+|.|++ |++ +|.+|.++|++|++++.+.....+.+++..+.+.. |.+ ++.+. ...+|+--|+++
T Consensus 5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~----~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI-GHD----AENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHCCCCCEEEECCCCCC
Confidence 47899999999998 999 79999999999999987543222224333333321 221 11121 234555555554
Q ss_pred CCCCCCCCCCCCceEecccchhh-hhh--hceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 212 VDVSVDPSCEYGYRLMGDVCYEE-AMR--LASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 212 ~~~~~~~~~~~~~k~~Gdvd~~~-~~~--~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
...........+-++.++.++-. +.+ +.-+ |-|--|.=|+..|+.++++..
T Consensus 79 ~~~~~~~a~~~~i~i~~~~e~~~~~~~~~~~I~---ITGTnGKTTTt~ll~~iL~~~ 132 (461)
T PRK00421 79 DNPELVAARELGIPVVRRAEMLAELMRFRTSIA---VAGTHGKTTTTSLLAHVLAEA 132 (461)
T ss_pred CCHHHHHHHHCCCcEEeHHHHHHHHHccCcEEE---EECCCCHHHHHHHHHHHHHhc
Confidence 31000000001235778887632 221 2333 557788999999999998764
No 198
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.40 E-value=0.0057 Score=54.55 Aligned_cols=59 Identities=10% Similarity=0.135 Sum_probs=45.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCH-----------------hhhcCCCcEEEEecCCCc
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVAN 191 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-~~l-----------------~~~l~~ADIVIsa~g~p~ 191 (272)
++++|++|+|||+|.+ +.-=+..|++.||.|+|+...- +++ .+.+..+++||.||+.+.
T Consensus 21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~ 97 (223)
T PRK05562 21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEK 97 (223)
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHH
Confidence 4567999999999885 7776778889999999996432 111 245788999999998764
No 199
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.37 E-value=0.0078 Score=54.14 Aligned_cols=68 Identities=13% Similarity=0.212 Sum_probs=49.4
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC----EEEEE-eCCC--------------CCHhhhcCCCcEEEEecCCCcc----cc
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHA----TVSIV-HALT--------------KNPEQITSEADIVIAAAGVANL----VR 194 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga----~V~v~-~~~t--------------~~l~~~l~~ADIVIsa~g~p~~----i~ 194 (272)
+|.+||.|.+ |.+++..|.+.|. +|+++ +|+. .+..+.++++|+||.++. |.. +.
T Consensus 2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~-~~~~~~vl~ 79 (266)
T PLN02688 2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVK-PQVVKDVLT 79 (266)
T ss_pred eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEEC-cHHHHHHHH
Confidence 6899999886 9999999999887 88888 6642 234566789999999994 432 11
Q ss_pred --CCCcCCCcEEEEe
Q 024103 195 --GSWLKPGAVVLDV 207 (272)
Q Consensus 195 --~~~vk~g~vviDi 207 (272)
...++++.+||.+
T Consensus 80 ~l~~~~~~~~~iIs~ 94 (266)
T PLN02688 80 ELRPLLSKDKLLVSV 94 (266)
T ss_pred HHHhhcCCCCEEEEe
Confidence 1234666666655
No 200
>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated
Probab=96.34 E-value=0.12 Score=49.87 Aligned_cols=158 Identities=16% Similarity=0.111 Sum_probs=99.4
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCccEEEEcCCC---CCCCCHHHHHhcCCc--cc
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPL---PQHLDEGKILDAVSL--EK 93 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~--~~~~el~~~i~~ln~d~~v~Gi~vq~Pl---p~~~~~~~i~~~i~p--~K 93 (272)
.|..=--+-..++.++|..+.++.-... ...|-+.+.++-|+.- +|+|.+--|- ..+-...++.++..- .+
T Consensus 69 pSTRTR~SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~ela~~~~~~~~~ 146 (395)
T PRK07200 69 NSTRTRFSYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMREVGAAVDDGYKQ 146 (395)
T ss_pred CCchhHHHHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHHHHHHhhhhccc
Confidence 3433334566889999999988753210 0124577777777764 8899998774 222112222222210 01
Q ss_pred cc-Cccc-cccccccccCCCCCccccCCHHH-HHHHHHHhCC--CCccceEEEEcC-------CcccHHHHHHHHHhCCC
Q 024103 94 DV-DGFH-PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV--EIMGKNAVVIGR-------SNIVGLPTSLLLQRHHA 161 (272)
Q Consensus 94 Dv-dg~~-~~n~g~l~~~~~~~~~~p~Ta~g-~~~~l~~~~~--~l~gk~v~ViG~-------g~~vG~~la~~L~~~ga 161 (272)
+| -..- .+|.+ .+...||=+.+ ++.+.++.|- .++|++|+++|. +..|.+.++.+|...|+
T Consensus 147 ~~~~~~pPVINa~-------~~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~Sl~~~~~~lG~ 219 (395)
T PRK07200 147 GVLPQRPTLVNLQ-------CDIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGM 219 (395)
T ss_pred ccccCCCeEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHHHHHHHHHHcCC
Confidence 11 1122 25541 23467998888 5666666664 389999999864 44678999999999999
Q ss_pred EEEEEeCC-------------------------CCCHhhhcCCCcEEEEec
Q 024103 162 TVSIVHAL-------------------------TKNPEQITSEADIVIAAA 187 (272)
Q Consensus 162 ~V~v~~~~-------------------------t~~l~~~l~~ADIVIsa~ 187 (272)
+|++++-. +.++.+.++.||+|.+-+
T Consensus 220 ~v~~~~P~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~ 270 (395)
T PRK07200 220 DVTLAHPEGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS 270 (395)
T ss_pred EEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 99998633 146678899999999653
No 201
>PRK06398 aldose dehydrogenase; Validated
Probab=96.32 E-value=0.0096 Score=53.06 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||+++|.|+++-+|+.++..|.++|++|+++.|+
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999999998888999999999999999988765
No 202
>PRK10637 cysG siroheme synthase; Provisional
Probab=96.30 E-value=0.0076 Score=59.06 Aligned_cols=113 Identities=13% Similarity=0.214 Sum_probs=69.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCH-----------------hhhcCCCcEEEEecCCCcc-
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVANL- 192 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-~~l-----------------~~~l~~ADIVIsa~g~p~~- 192 (272)
++++||+|+|||.|.+ +.-=+..|++.||.|+|+...- +++ .+.++.+++||.||+.+.+
T Consensus 8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHHHh
Confidence 5789999999999885 7766778889999999985431 111 2457889999999987643
Q ss_pred --ccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhh---ceEeccCCCcccHHHHHHHHHHHH
Q 024103 193 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTL 262 (272)
Q Consensus 193 --i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~---~~~~tpvpGGvGp~T~amL~~n~v 262 (272)
+-.. -+..-+.+++.-+|.. +|+-|.++.++ ..+++ -+|-.|..+..|-+++-
T Consensus 87 ~~i~~~-a~~~~~lvN~~d~~~~--------------~~f~~pa~~~~g~l~iais--T~G~sP~~a~~lr~~ie 144 (457)
T PRK10637 87 QRVSEA-AEARRIFCNVVDAPKA--------------ASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLE 144 (457)
T ss_pred HHHHHH-HHHcCcEEEECCCccc--------------CeEEEeeEEecCCEEEEEE--CCCCCcHHHHHHHHHHH
Confidence 2111 1222345566645432 12222222221 22333 47888888877655443
No 203
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.29 E-value=0.011 Score=53.78 Aligned_cols=70 Identities=19% Similarity=0.259 Sum_probs=51.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC---------------CCHhhhcCCCcEEEEecCCCc---ccc--C
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT---------------KNPEQITSEADIVIAAAGVAN---LVR--G 195 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t---------------~~l~~~l~~ADIVIsa~g~p~---~i~--~ 195 (272)
++.|||.|.+ |.+++..|.+.|. +|++++++. .+..+. .++|+||.+++... .+. .
T Consensus 2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~-~~aD~Vilavp~~~~~~~~~~l~ 79 (275)
T PRK08507 2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEEL-KKCDVIFLAIPVDAIIEILPKLL 79 (275)
T ss_pred EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHH-hcCCEEEEeCcHHHHHHHHHHHh
Confidence 6899999885 9999999999885 788887642 133343 45999999998543 221 1
Q ss_pred CCcCCCcEEEEeeeC
Q 024103 196 SWLKPGAVVLDVGTC 210 (272)
Q Consensus 196 ~~vk~g~vviDig~~ 210 (272)
. ++++++|+|+|..
T Consensus 80 ~-l~~~~iv~d~gs~ 93 (275)
T PRK08507 80 D-IKENTTIIDLGST 93 (275)
T ss_pred c-cCCCCEEEECccc
Confidence 2 6789999999875
No 204
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.0063 Score=53.58 Aligned_cols=39 Identities=26% Similarity=0.320 Sum_probs=35.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++||+++|.|+++-+|+.++..|.++|++|+++.|+.
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~ 43 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV 43 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 458899999999988889999999999999999987754
No 205
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=96.28 E-value=0.018 Score=53.34 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=93.0
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcccccccc
Q 024103 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (272)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~l~~~~---~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~~~n~g 104 (272)
+-..++..+|....|+.= .+. ..+.+.+.-+=|..- +|||.+--. +|.+..++-++ .++-.+|
T Consensus 61 SFeva~~qlGg~~~~l~~-~~~Qlgr~Esi~DTArVLsr~--~D~I~~R~~--~~~~ve~lA~~-------s~VPViN-- 126 (310)
T COG0078 61 SFEVAATQLGGHAIYLGP-GDSQLGRGESIKDTARVLSRM--VDAIMIRGF--SHETLEELAKY-------SGVPVIN-- 126 (310)
T ss_pred hHHHHHHHcCCCeEEeCC-CccccCCCCcHHHHHHHHHhh--hheEEEecc--cHHHHHHHHHh-------CCCceEc--
Confidence 345677888888877642 221 112234444444432 788887554 32222222221 1122222
Q ss_pred ccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---------------
Q 024103 105 NLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------- 169 (272)
Q Consensus 105 ~l~~~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~--------------- 169 (272)
| -++.+.||-..|=+--++++.-.++|++++=+|-|+.|+..+....+..|..|+++.-+
T Consensus 127 ----g-LtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ia~Pk~~~p~~~~~~~a~~~ 201 (310)
T COG0078 127 ----G-LTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAKEN 201 (310)
T ss_pred ----c-cccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEEEECCCcCCcCHHHHHHHHHH
Confidence 2 36778899999955555555555999999999999999999999999999999998643
Q ss_pred ----------CCCHhhhcCCCcEEEEec
Q 024103 170 ----------TKNPEQITSEADIVIAAA 187 (272)
Q Consensus 170 ----------t~~l~~~l~~ADIVIsa~ 187 (272)
+.+..+..+.||+|.|=+
T Consensus 202 a~~~g~~i~~t~d~~eAv~gADvvyTDv 229 (310)
T COG0078 202 AKESGGKITLTEDPEEAVKGADVVYTDV 229 (310)
T ss_pred HHhcCCeEEEecCHHHHhCCCCEEEecC
Confidence 257789999999999665
No 206
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.28 E-value=0.01 Score=57.33 Aligned_cols=126 Identities=21% Similarity=0.260 Sum_probs=68.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---HhhhcCCCcEEEEecCC-CccccCCCcC--CCcEEEE
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---PEQITSEADIVIAAAGV-ANLVRGSWLK--PGAVVLD 206 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~---l~~~l~~ADIVIsa~g~-p~~i~~~~vk--~g~vviD 206 (272)
+++||+++|+|.|+ .|++++..|+++|++|++++++... ..+.++...+-+. .|. +. +.+. ...+|.-
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~-~~~~~~----~~~~~~~d~vV~s 75 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI-CGSHPL----ELLDEDFDLMVKN 75 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE-eCCCCH----HHhcCcCCEEEEC
Confidence 36799999999999 5999999999999999999865421 1122222221111 110 10 0011 1234444
Q ss_pred eeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 207 VGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 207 ig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
-|+++...........+-+++++.++........ +.-|-|--|.=|+..|+.++++..
T Consensus 76 ~gi~~~~~~~~~a~~~~i~v~~~~el~~~~~~~~-~I~VTGT~GKTTTt~ll~~iL~~~ 133 (447)
T PRK02472 76 PGIPYTNPMVEKALEKGIPIITEVELAYLISEAP-IIGITGSNGKTTTTTLIGEMLKAG 133 (447)
T ss_pred CCCCCCCHHHHHHHHCCCcEEeHHHHHHHhcCCC-EEEEeCCCchHHHHHHHHHHHHHC
Confidence 4444321000000001235667766532111111 223668889999999999988754
No 207
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.27 E-value=0.01 Score=54.37 Aligned_cols=72 Identities=18% Similarity=0.195 Sum_probs=52.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------------------CCHhhhc
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------------KNPEQIT 177 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------------------------------------~~l~~~l 177 (272)
++|.|||+|-+ |.++|..|+..|.+|++++++. .++++.+
T Consensus 4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~ 82 (287)
T PRK08293 4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV 82 (287)
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence 58999999875 9999999999999999997542 2345678
Q ss_pred CCCcEEEEecCCCc-----ccc--CCCcCCCcEEEEeee
Q 024103 178 SEADIVIAAAGVAN-----LVR--GSWLKPGAVVLDVGT 209 (272)
Q Consensus 178 ~~ADIVIsa~g~p~-----~i~--~~~vk~g~vviDig~ 209 (272)
++||+||.|++..- ++. ...+++++++.+...
T Consensus 83 ~~aDlVieavpe~~~~k~~~~~~l~~~~~~~~ii~sntS 121 (287)
T PRK08293 83 KDADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSS 121 (287)
T ss_pred cCCCEEEEeccCCHHHHHHHHHHHHhhCCCCCEEEECcc
Confidence 99999999998431 111 124566777655443
No 208
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.26 E-value=0.0039 Score=57.95 Aligned_cols=90 Identities=26% Similarity=0.325 Sum_probs=65.9
Q ss_pred HHHHHHHHH----------hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------
Q 024103 121 KGCIELLIR----------SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------- 170 (272)
Q Consensus 121 ~g~~~~l~~----------~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------------- 170 (272)
.+++..+.. .+...++.+++++|.|-+ |-.++..-...|+-|+-..-..
T Consensus 139 ~aVi~Aa~a~~rffpm~~TAagtv~pA~vlv~G~Gva-gl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee 217 (356)
T COG3288 139 IAVIGAALAYGRFFPMQITAAGTVSPAKVLVIGAGVA-GLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEE 217 (356)
T ss_pred HHHHHHHHHhhhcccchhhhcccccchhhhhhhHHHH-HHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccc
Confidence 556666666 345678899999999775 8887777777787776553210
Q ss_pred ------------------CCHhhhcCCCcEEEEec---C--CCccccCCCc---CCCcEEEEeeeCC
Q 024103 171 ------------------KNPEQITSEADIVIAAA---G--VANLVRGSWL---KPGAVVLDVGTCP 211 (272)
Q Consensus 171 ------------------~~l~~~l~~ADIVIsa~---g--~p~~i~~~~v---k~g~vviDig~~~ 211 (272)
+-+.+++++.|||||+. | .|.+++.+|+ |||++|+|++...
T Consensus 218 ~~gGYAk~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~ 284 (356)
T COG3288 218 SAGGYAKEMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAET 284 (356)
T ss_pred cCCCccccCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhc
Confidence 12357899999999877 3 3557899987 8999999998654
No 209
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.25 E-value=0.007 Score=49.36 Aligned_cols=72 Identities=24% Similarity=0.284 Sum_probs=46.4
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------CCHhhhcCCCcEEEEecCCCcc------c
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL------V 193 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t----------------~~l~~~l~~ADIVIsa~g~p~~------i 193 (272)
--+|.|||+|. ||..++..|.+.|..|.-+.+++ .++.+.+++||++|-+++-..+ +
T Consensus 10 ~l~I~iIGaGr-VG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~L 88 (127)
T PF10727_consen 10 RLKIGIIGAGR-VGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQL 88 (127)
T ss_dssp --EEEEECTSC-CCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHHH
T ss_pred ccEEEEECCCH-HHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHHH
Confidence 45899999999 59999999999999887775442 2456789999999999984321 2
Q ss_pred -cCCCcCCCcEEEEee
Q 024103 194 -RGSWLKPGAVVLDVG 208 (272)
Q Consensus 194 -~~~~vk~g~vviDig 208 (272)
....+++|.+|+=+.
T Consensus 89 a~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTS 104 (127)
T ss_dssp HCC--S-TT-EEEES-
T ss_pred HHhccCCCCcEEEECC
Confidence 222356788776554
No 210
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.24 E-value=0.017 Score=54.33 Aligned_cols=93 Identities=14% Similarity=0.165 Sum_probs=61.6
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------------Hhh
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQ 175 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~---------------------l~~ 175 (272)
+|.....+..+...+..-.|++|+|.|.|. +|..+++++...|++|+++....+. +.+
T Consensus 165 ~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~ 243 (360)
T PLN02586 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA 243 (360)
T ss_pred hcchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh
Confidence 444444455555554444799999999976 5999999999999987765433211 111
Q ss_pred hcCCCcEEEEecCCCccc--cCCCcCCCcEEEEeeeC
Q 024103 176 ITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 176 ~l~~ADIVIsa~g~p~~i--~~~~vk~g~vviDig~~ 210 (272)
.+..+|+||.++|.+..+ --+.++++-.++.+|..
T Consensus 244 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~ 280 (360)
T PLN02586 244 AIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP 280 (360)
T ss_pred hcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence 222469999999876533 22457888788888854
No 211
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.012 Score=52.06 Aligned_cols=38 Identities=29% Similarity=0.317 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998889999999999999999988775
No 212
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.20 E-value=0.0091 Score=52.53 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=49.7
Q ss_pred eEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------------CHhhhcCCCcEEEEecCCCc
Q 024103 138 NAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------NPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 138 ~v~ViG-~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------------------~l~~~l~~ADIVIsa~g~p~ 191 (272)
++.||| .|. +|.+++..|.+.|.+|++.+|+.+ +..+.++++|+||.+++...
T Consensus 2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~ 80 (219)
T TIGR01915 2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDH 80 (219)
T ss_pred EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHH
Confidence 689998 666 599999999999999998877531 22355788999999998643
Q ss_pred c---cc--CCCcCCCcEEEEee
Q 024103 192 L---VR--GSWLKPGAVVLDVG 208 (272)
Q Consensus 192 ~---i~--~~~vk~g~vviDig 208 (272)
+ +. ...++ +.+|||+.
T Consensus 81 ~~~~l~~l~~~l~-~~vvI~~~ 101 (219)
T TIGR01915 81 VLKTLESLRDELS-GKLVISPV 101 (219)
T ss_pred HHHHHHHHHHhcc-CCEEEEec
Confidence 2 21 11233 47888884
No 213
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.18 E-value=0.025 Score=49.31 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=31.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.+++++|+|+|.|+ +|-.++..|...|. ++++++..
T Consensus 18 ~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 18 RLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 36789999999999 59999999999996 79999754
No 214
>PLN02477 glutamate dehydrogenase
Probab=96.17 E-value=0.012 Score=56.97 Aligned_cols=53 Identities=23% Similarity=0.318 Sum_probs=44.6
Q ss_pred ccCCHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeCC
Q 024103 116 IPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHAL 169 (272)
Q Consensus 116 ~p~Ta~g~~~~----l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~-v~~~~ 169 (272)
.+.|++|+... +++++.+++|++|+|.|.|. ||+.++.+|.++|++|+ |++++
T Consensus 182 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGn-VG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 182 EAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGN-VGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred CccchHHHHHHHHHHHHHcCCCccCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECCC
Confidence 47899886554 45678899999999999988 59999999999999877 77665
No 215
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.17 E-value=0.051 Score=52.26 Aligned_cols=123 Identities=21% Similarity=0.248 Sum_probs=83.1
Q ss_pred CCCHHHHHhcCCcccccCccccccccccccCCCCCccccCCHHHHHHHHHHhC---------------------------
Q 024103 79 HLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSG--------------------------- 131 (272)
Q Consensus 79 ~~~~~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~~~~l~~~~--------------------------- 131 (272)
+.|..++.+.|-.++.|.- |..|.|- |+...|| |-+-.|.++..++++
T Consensus 231 g~D~~~V~~gIGlD~RIG~-~fl~aG~---GyGGsCf-PKD~~AL~~~a~~~~~~~~ll~avv~vN~~qk~~~~~~i~~~ 305 (414)
T COG1004 231 GADVKQVAEGIGLDPRIGN-HFLNAGF---GYGGSCF-PKDTKALIANAEELGYDPNLLEAVVEVNERRKDKLAEKILNH 305 (414)
T ss_pred CCCHHHHHHHcCCCchhhH-hhCCCCC---CCCCcCC-cHhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4577888888877777653 4445443 2223344 555555555544433
Q ss_pred CCCccceEEEEcCC---------cccHHHHHHHHHhCCCEEEEEeCC--------------CCCHhhhcCCCcEEEEecC
Q 024103 132 VEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHAL--------------TKNPEQITSEADIVIAAAG 188 (272)
Q Consensus 132 ~~l~gk~v~ViG~g---------~~vG~~la~~L~~~ga~V~v~~~~--------------t~~l~~~l~~ADIVIsa~g 188 (272)
..++||++.|.|-. .+-...++.+|.++|++|.+.+.. ..++++.++.||++|..|.
T Consensus 306 ~~l~Gk~iavlgLafKpnTDD~ReSpa~~vi~~L~~~Ga~V~aYDP~a~~~~~~~~~~~~~~~~~~~~~~~aDaivi~te 385 (414)
T COG1004 306 LGLKGKTIAVLGLAFKPNTDDMRESPALDIIKRLQEKGAEVIAYDPVAMENAFRNFPDVELESDAEEALKGADAIVINTE 385 (414)
T ss_pred cCCCCcEEEEEEEeecCCCccchhchHHHHHHHHHHCCCEEEEECchhhHHHHhcCCCceEeCCHHHHHhhCCEEEEecc
Confidence 23889999999921 234788999999999999998632 2467899999999999999
Q ss_pred CCccccCCCc---CCCcEEEE
Q 024103 189 VANLVRGSWL---KPGAVVLD 206 (272)
Q Consensus 189 ~p~~i~~~~v---k~g~vviD 206 (272)
+..+-..+|- -++.+|+|
T Consensus 386 w~ef~~~d~~~~~m~~~~v~D 406 (414)
T COG1004 386 WDEFRDLDFEKLLMKTPVVID 406 (414)
T ss_pred HHHHhccChhhhhccCCEEEe
Confidence 8777544432 23556777
No 216
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.14 E-value=0.0079 Score=52.52 Aligned_cols=36 Identities=25% Similarity=0.491 Sum_probs=31.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.+++++|+|+|.|+. |..++..|...|. ++++++..
T Consensus 18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecCC
Confidence 468999999999995 9999999999996 89998754
No 217
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.12 E-value=0.017 Score=53.95 Aligned_cols=55 Identities=24% Similarity=0.449 Sum_probs=44.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC--------------------------CCHhhhcCCCcEEEEe
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT--------------------------KNPEQITSEADIVIAA 186 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t--------------------------~~l~~~l~~ADIVIsa 186 (272)
++.+||.|||+|. +|..++..|+..| +++.+++.+. .++ +.+++||+||.+
T Consensus 3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVit 80 (319)
T PTZ00117 3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVIT 80 (319)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEEC
Confidence 4678999999977 5999999999888 6888887531 233 478999999999
Q ss_pred cCCC
Q 024103 187 AGVA 190 (272)
Q Consensus 187 ~g~p 190 (272)
.|.|
T Consensus 81 ag~~ 84 (319)
T PTZ00117 81 AGVQ 84 (319)
T ss_pred CCCC
Confidence 9754
No 218
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.11 E-value=0.016 Score=56.67 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=32.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+.+|+|+|+|.|+. |++++.+|.++|++|+++++.
T Consensus 12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~ 46 (458)
T PRK01710 12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKK 46 (458)
T ss_pred hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCC
Confidence 46899999999997 999999999999999999865
No 219
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.09 E-value=0.016 Score=51.36 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=39.1
Q ss_pred HHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC
Q 024103 122 GCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 170 (272)
Q Consensus 122 g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t 170 (272)
++.+.+++.+.+++|++|+|.|.|. ||+.++..|.++|+ .|.+++++.
T Consensus 9 ~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 9 AMKAAMKHLGDSLEGLTVAVQGLGN-VGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred HHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3445566777899999999999988 59999999999987 577776553
No 220
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.09 E-value=0.0096 Score=52.98 Aligned_cols=52 Identities=23% Similarity=0.338 Sum_probs=42.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------------------CCHhhh-cCCCcEEEEecCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------KNPEQI-TSEADIVIAAAGV 189 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-----------------------~~l~~~-l~~ADIVIsa~g~ 189 (272)
++++|+|.|.. |..+|..|.++|.+|++..++. .-|+++ +.+||++|.+||.
T Consensus 1 m~iiIiG~G~v-G~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGRV-GRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcHH-HHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 57999999995 9999999999999999998652 123343 7889999999986
No 221
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.013 Score=52.36 Aligned_cols=38 Identities=18% Similarity=0.154 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 46899999999988889999999999999998877643
No 222
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.0095 Score=52.93 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++++++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~ 39 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA 39 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 46899999999988899999999999999999998764
No 223
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.05 E-value=0.015 Score=50.47 Aligned_cols=57 Identities=26% Similarity=0.353 Sum_probs=44.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CH----h---hhcCCCcEEEEecCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NP----E---QITSEADIVIAAAGV 189 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~------------~l----~---~~l~~ADIVIsa~g~ 189 (272)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+.. ++ . +.....|++|...|.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 478999999999888999999999999999998877531 11 1 123456888877773
No 224
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.05 E-value=0.011 Score=51.70 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=31.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.|+.++|+|+|.|+. |..++.+|++.|. ++++++.+
T Consensus 18 ~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECCC
Confidence 467899999999996 9999999999997 79998754
No 225
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.04 E-value=0.018 Score=53.81 Aligned_cols=55 Identities=20% Similarity=0.299 Sum_probs=44.4
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCCC-----------------------CHhhhcCCCcEEEEecCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK-----------------------NPEQITSEADIVIAAAGV 189 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t~-----------------------~l~~~l~~ADIVIsa~g~ 189 (272)
+++||.|||+|. ||.+++..|+.+|. ++.+++.+.+ +-.+.+++||+||.+.|.
T Consensus 5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~ 83 (315)
T PRK00066 5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA 83 (315)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence 678999999977 69999999998885 6888876421 124678999999999996
Q ss_pred C
Q 024103 190 A 190 (272)
Q Consensus 190 p 190 (272)
|
T Consensus 84 ~ 84 (315)
T PRK00066 84 P 84 (315)
T ss_pred C
Confidence 5
No 226
>PLN02712 arogenate dehydrogenase
Probab=96.02 E-value=0.012 Score=60.39 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=56.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhc-CCCcEEEEecCCCc---ccc--
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQIT-SEADIVIAAAGVAN---LVR-- 194 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------~~l~~~l-~~ADIVIsa~g~p~---~i~-- 194 (272)
-+-+++.|||.|.+ |..++..|.+.|.+|++++++. .++.+.+ ++||+||.+++... ++.
T Consensus 50 ~~~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l 128 (667)
T PLN02712 50 TTQLKIAIIGFGNY-GQFLAKTLISQGHTVLAHSRSDHSLAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSL 128 (667)
T ss_pred CCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhh
Confidence 34578999999885 9999999999999999887752 1233434 46999999998422 232
Q ss_pred -CCCcCCCcEEEEeeeC
Q 024103 195 -GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 195 -~~~vk~g~vviDig~~ 210 (272)
...++++++|+|++.-
T Consensus 129 ~~~~l~~g~iVvDv~Sv 145 (667)
T PLN02712 129 PLQRLKRNTLFVDVLSV 145 (667)
T ss_pred hhhcCCCCeEEEECCCC
Confidence 2346889999999843
No 227
>PRK08223 hypothetical protein; Validated
Probab=96.02 E-value=0.013 Score=54.13 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=31.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~ 168 (272)
.|++++|+|+|.|+. |-+++.+|+..|. ++++++.
T Consensus 24 kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD~ 59 (287)
T PRK08223 24 RLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIADF 59 (287)
T ss_pred HHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEeC
Confidence 468999999999995 9999999999996 8888864
No 228
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.01 E-value=0.0066 Score=53.62 Aligned_cols=38 Identities=24% Similarity=0.270 Sum_probs=34.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|.+.+|+.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~ 44 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP 44 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 57899999999988889999999999999999988764
No 229
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.0094 Score=51.48 Aligned_cols=38 Identities=21% Similarity=0.251 Sum_probs=34.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.++||+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~ 41 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGA 41 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh
Confidence 46799999999999999999999999999999998854
No 230
>PRK14031 glutamate dehydrogenase; Provisional
Probab=96.00 E-value=0.016 Score=56.73 Aligned_cols=51 Identities=25% Similarity=0.230 Sum_probs=43.3
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024103 115 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (272)
Q Consensus 115 ~~p~Ta~g~~~~----l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~ 166 (272)
-.++|.+|++.. +++.+.+++||+|+|.|.|. ||..++..|.+.|++|+.+
T Consensus 203 r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGN-VG~~aA~~L~e~GAkVVaV 257 (444)
T PRK14031 203 RPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGN-VAQYTAEKVLELGGKVVTM 257 (444)
T ss_pred CCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 347899986554 45678899999999999988 5999999999999998874
No 231
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.99 E-value=0.0097 Score=53.50 Aligned_cols=36 Identities=11% Similarity=0.266 Sum_probs=31.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.+++++|+|+|.|+. |..++.+|+..|. ++++++..
T Consensus 21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEeCC
Confidence 367899999999996 9999999999995 88888643
No 232
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.99 E-value=0.0061 Score=54.13 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=30.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~ 167 (272)
.+++++|+|+|.|+. |..++..|...|. ++++++
T Consensus 18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD 52 (228)
T cd00757 18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVD 52 (228)
T ss_pred HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEc
Confidence 467899999999995 9999999999996 788885
No 233
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.99 E-value=0.012 Score=57.96 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=32.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+.|++|+|+|.|.. |++++.+|..+|++|+++++.
T Consensus 10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~ 44 (488)
T PRK03369 10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDD 44 (488)
T ss_pred cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCC
Confidence 37899999999997 999999999999999999865
No 234
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.0079 Score=53.00 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=35.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK 171 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~ 171 (272)
+++||+++|.|+|.-+|++++..|+++|++|.++.|+.+
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~ 40 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQS 40 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 578999999999998999999999999999999987653
No 235
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=95.97 E-value=0.0092 Score=51.53 Aligned_cols=53 Identities=26% Similarity=0.295 Sum_probs=35.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------------CCHhhhcCCCcE
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI 182 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t----------------------------------~~l~~~l~~ADI 182 (272)
+||.|+|.|- ||-++|..|++.|.+|+-++.+. .+..+.+++||+
T Consensus 1 M~I~ViGlGy-vGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGY-VGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--ST-THHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCc-chHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 4899999988 59999999999999999997541 233456788888
Q ss_pred EEEecCCC
Q 024103 183 VIAAAGVA 190 (272)
Q Consensus 183 VIsa~g~p 190 (272)
+|-+++-|
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 88777755
No 236
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=95.96 E-value=0.019 Score=56.17 Aligned_cols=127 Identities=20% Similarity=0.235 Sum_probs=70.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH--hhhcCCCcEEEEecCCCccccCCCcCC-CcEEEEeeeC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--EQITSEADIVIAAAGVANLVRGSWLKP-GAVVLDVGTC 210 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l--~~~l~~ADIVIsa~g~p~~i~~~~vk~-g~vviDig~~ 210 (272)
+.+|+|+|+|-|.. |++++..|.++|+.|++++.+.... ........-|=...|. +.. ++... ..+|..=|++
T Consensus 5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~-~~~--~~~~~~d~vV~SPGi~ 80 (448)
T COG0771 5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGS-HDD--EDLAEFDLVVKSPGIP 80 (448)
T ss_pred ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCc-cch--hccccCCEEEECCCCC
Confidence 45999999999998 9999999999999999998554220 0000000110011111 011 22222 3344444444
Q ss_pred CCCCCCCCCCCCCceEecccchhhhhh--hceEeccCCCcccHHHHHHHHHHHHHHHH
Q 024103 211 PVDVSVDPSCEYGYRLMGDVCYEEAMR--LASVITPVPGGVGPMTVAMLLSNTLDSAK 266 (272)
Q Consensus 211 ~~~~~~~~~~~~~~k~~Gdvd~~~~~~--~~~~~tpvpGGvGp~T~amL~~n~v~a~~ 266 (272)
+....+......+-++.||+..-. .. .+-++ -+-|-=|.-|+.-|+.+++++.-
T Consensus 81 ~~~p~v~~A~~~gi~i~~dieL~~-r~~~~~p~v-aITGTNGKTTTTsli~~~l~~~G 136 (448)
T COG0771 81 PTHPLVEAAKAAGIEIIGDIELFY-RLSGEAPIV-AITGTNGKTTTTSLIAHLLKAAG 136 (448)
T ss_pred CCCHHHHHHHHcCCcEEeHHHHHH-HhcCCCCEE-EEECCCchHHHHHHHHHHHHhcC
Confidence 432000000011346889887533 21 12222 24466679999999999988763
No 237
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.015 Score=53.10 Aligned_cols=40 Identities=28% Similarity=0.335 Sum_probs=35.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
...++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~ 74 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE 74 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4567899999999988889999999999999999998764
No 238
>PLN02858 fructose-bisphosphate aldolase
Probab=95.83 E-value=0.013 Score=64.56 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=60.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCcc----c-cC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-RG 195 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~~----i-~~ 195 (272)
..++|-+||-|.+ |.+++..|++.|.+|++.+++. .+..+..++||+||+.++.+.- + ..
T Consensus 3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~ 81 (1378)
T PLN02858 3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGD 81 (1378)
T ss_pred CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhch
Confidence 4678999999986 9999999999999999999873 3567888999999999986542 1 11
Q ss_pred ----CCcCCCcEEEEeeeC
Q 024103 196 ----SWLKPGAVVLDVGTC 210 (272)
Q Consensus 196 ----~~vk~g~vviDig~~ 210 (272)
+.+++|.++||+++.
T Consensus 82 ~g~~~~l~~g~iivd~STi 100 (1378)
T PLN02858 82 EGAAKGLQKGAVILIRSTI 100 (1378)
T ss_pred hhHHhcCCCcCEEEECCCC
Confidence 134778999998855
No 239
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.83 E-value=0.0092 Score=52.62 Aligned_cols=39 Identities=21% Similarity=0.225 Sum_probs=35.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
..++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~ 45 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA 45 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH
Confidence 457899999999999999999999999999999998764
No 240
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=95.82 E-value=0.075 Score=52.50 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=55.0
Q ss_pred CCCccceEEEEcCC---------cccHHHHHHHHHhCCCEEEEEeCCCC-------------------------------
Q 024103 132 VEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALTK------------------------------- 171 (272)
Q Consensus 132 ~~l~gk~v~ViG~g---------~~vG~~la~~L~~~ga~V~v~~~~t~------------------------------- 171 (272)
-+++|++|+|+|.+ +.-...++..|.++|++|.+.+-.-.
T Consensus 320 ~~~~~~~VavlGlafK~~tdD~R~Spa~~li~~L~~~G~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (473)
T PLN02353 320 NTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEEQIQRDLSMNKFDWDHPRHLQPMSPTAVKQ 399 (473)
T ss_pred cccCCCEEEEEeeeecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChHHHHHHhhcccccccccccccccccccccc
Confidence 36899999999932 22378899999999999998864310
Q ss_pred -----CHhhhcCCCcEEEEecCCCcc--ccC----CCcCCCcEEEEee
Q 024103 172 -----NPEQITSEADIVIAAAGVANL--VRG----SWLKPGAVVLDVG 208 (272)
Q Consensus 172 -----~l~~~l~~ADIVIsa~g~p~~--i~~----~~vk~g~vviDig 208 (272)
++.+.+++||+||.+|..+.+ ++. +.+++..+|+|.-
T Consensus 400 ~~~~~~~~~a~~~aD~vvi~t~~~ef~~l~~~~~~~~m~~~~~viD~r 447 (473)
T PLN02353 400 VSVVWDAYEATKGAHGICILTEWDEFKTLDYQKIYDNMQKPAFVFDGR 447 (473)
T ss_pred eeeeCCHHHHhcCCCEEEECCCChHhcccCHHHHHHhccCCCEEEECC
Confidence 124678999999999998875 331 1233445788943
No 241
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.82 E-value=0.014 Score=53.62 Aligned_cols=72 Identities=19% Similarity=0.234 Sum_probs=51.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH-------------------------------------hhhcCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP-------------------------------------EQITSE 179 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l-------------------------------------~~~l~~ 179 (272)
++|.|||.|.+ |.+++..|+..|.+|++++++...+ .+.+++
T Consensus 5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (295)
T PLN02545 5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRD 83 (295)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCC
Confidence 68999999886 9999999999999999998653111 145788
Q ss_pred CcEEEEecCC-Cc----ccc--CCCcCCCcEEE-Eeee
Q 024103 180 ADIVIAAAGV-AN----LVR--GSWLKPGAVVL-DVGT 209 (272)
Q Consensus 180 ADIVIsa~g~-p~----~i~--~~~vk~g~vvi-Dig~ 209 (272)
||+||.++.- |. ++. .+.++++++++ +.+.
T Consensus 84 aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~ 121 (295)
T PLN02545 84 ADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSS 121 (295)
T ss_pred CCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 9999999873 32 111 13456776664 5443
No 242
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.82 E-value=0.01 Score=51.80 Aligned_cols=38 Identities=24% Similarity=0.245 Sum_probs=34.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++|+++|+|+++.+|+.++..|+++|++|++..|+.
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999988899999999999999999998865
No 243
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.82 E-value=0.02 Score=52.82 Aligned_cols=53 Identities=25% Similarity=0.359 Sum_probs=43.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------------CCHhhhcCCCcEE
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------KNPEQITSEADIV 183 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------------------------------~~l~~~l~~ADIV 183 (272)
++|.|||.|.+ |.+++..|++.|.+|++++++. .++.+.+++||+|
T Consensus 5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV 83 (311)
T PRK06130 5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV 83 (311)
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence 68999999885 9999999999999999997532 2334567899999
Q ss_pred EEecCCC
Q 024103 184 IAAAGVA 190 (272)
Q Consensus 184 Isa~g~p 190 (272)
|.++...
T Consensus 84 i~av~~~ 90 (311)
T PRK06130 84 IEAVPEK 90 (311)
T ss_pred EEeccCc
Confidence 9998743
No 244
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.81 E-value=0.014 Score=55.05 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=31.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.+++++|+|||.|+. |.+++.+|++.|. ++++++++
T Consensus 21 ~L~~~~VlIiG~Ggl-Gs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 21 KIREKHVLIVGAGAL-GAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred hhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcCC
Confidence 468899999999995 9999999999996 88988754
No 245
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=95.79 E-value=0.023 Score=51.42 Aligned_cols=53 Identities=28% Similarity=0.362 Sum_probs=42.1
Q ss_pred EEEEcCCcccHHHHHHHHHhCC----CEEEEEeCC-------------------------CCCHhhhcCCCcEEEEecCC
Q 024103 139 AVVIGRSNIVGLPTSLLLQRHH----ATVSIVHAL-------------------------TKNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 139 v~ViG~g~~vG~~la~~L~~~g----a~V~v~~~~-------------------------t~~l~~~l~~ADIVIsa~g~ 189 (272)
++|||+|+.+|..++..|+..| .++++.+.+ +.++++.+++||+||.+.|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799996678999999998888 578888643 13457889999999999886
Q ss_pred Cc
Q 024103 190 AN 191 (272)
Q Consensus 190 p~ 191 (272)
|.
T Consensus 81 ~~ 82 (263)
T cd00650 81 GR 82 (263)
T ss_pred CC
Confidence 43
No 246
>PRK07680 late competence protein ComER; Validated
Probab=95.78 E-value=0.017 Score=52.34 Aligned_cols=71 Identities=17% Similarity=0.282 Sum_probs=51.4
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC----CEEEEEeCCC----------------CCHhhhcCCCcEEEEecCCCc---ccc
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR 194 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~g----a~V~v~~~~t----------------~~l~~~l~~ADIVIsa~g~p~---~i~ 194 (272)
++.|||.|.+ |.+++..|.+.| ..|++++|+. .+..+.++++|+||.++.... .++
T Consensus 2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~~~~~vl~ 80 (273)
T PRK07680 2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPLDIYPLLQ 80 (273)
T ss_pred EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHHHHHHHHH
Confidence 5899999885 999999999888 3789998752 234456789999999985221 121
Q ss_pred --CCCcCCCcEEEEeee
Q 024103 195 --GSWLKPGAVVLDVGT 209 (272)
Q Consensus 195 --~~~vk~g~vviDig~ 209 (272)
...++++.+|+++.-
T Consensus 81 ~l~~~l~~~~~iis~~a 97 (273)
T PRK07680 81 KLAPHLTDEHCLVSITS 97 (273)
T ss_pred HHHhhcCCCCEEEEECC
Confidence 124566788888873
No 247
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.78 E-value=0.021 Score=55.28 Aligned_cols=40 Identities=23% Similarity=0.299 Sum_probs=35.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
...++||+++|.|+++-+|++++..|.++|++|+++.|+.
T Consensus 173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~ 212 (406)
T PRK07424 173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS 212 (406)
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467899999999988899999999999999999887654
No 248
>KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism]
Probab=95.78 E-value=0.021 Score=53.77 Aligned_cols=171 Identities=19% Similarity=0.256 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhc-CCcccccCcc--
Q 024103 22 SQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDA-VSLEKDVDGF-- 98 (272)
Q Consensus 22 s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~-i~p~KDvdg~-- 98 (272)
++.|-+.-.+.+++.|++.+.+. +.+.+|+...+ .+.|+++|..--+ ++ .+++++ -...|=|...
T Consensus 12 ~e~~~~~~~~~l~~~g~~v~~~~---~~~~eel~~~i------~~~~aviVrs~tk--vt-advl~aa~~~lkvVgrag~ 79 (406)
T KOG0068|consen 12 AESLDQACIEILKDNGYQVEFKK---NLSLEELIEKI------KDCDALIVRSKTK--VT-ADVLEAAAGGLKVVGRAGI 79 (406)
T ss_pred ecccchHHHHHHHhcCceEEEec---cCCHHHHHHHh------ccCCEEEEEeCCe--ec-HHHHHhhcCCeEEEEeccc
Confidence 34566667788899998887554 33556776666 4578999987633 44 456663 3335544432
Q ss_pred cccc--c------cccccCCCCCccccCCHHHHHHH-------H-------------------HHhCCCCccceEEEEcC
Q 024103 99 HPLN--I------GNLAMRGREPLFIPCTPKGCIEL-------L-------------------IRSGVEIMGKNAVVIGR 144 (272)
Q Consensus 99 ~~~n--~------g~l~~~~~~~~~~p~Ta~g~~~~-------l-------------------~~~~~~l~gk~v~ViG~ 144 (272)
..-| + |-+.. +.|.+ .+.++.|+ | +..+.++.||+.-|+|.
T Consensus 80 G~dNVDL~AAte~gi~Vv--n~P~~---Ns~saAEltigli~SLaR~i~~A~~s~k~g~wnr~~~~G~el~GKTLgvlG~ 154 (406)
T KOG0068|consen 80 GVDNVDLKAATENGILVV--NTPTA---NSRSAAELTIGLILSLARQIGQASASMKEGKWNRVKYLGWELRGKTLGVLGL 154 (406)
T ss_pred CccccChhhHHhCCeEEE--eCCCC---ChHHHHHHHHHHHHHHhhhcchhheeeecCceeecceeeeEEeccEEEEeec
Confidence 1111 1 11111 12222 12222221 1 12457889999999999
Q ss_pred CcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCcEEEEecC-CC---ccccCCC---cCCCcEEE
Q 024103 145 SNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAG-VA---NLVRGSW---LKPGAVVL 205 (272)
Q Consensus 145 g~~vG~~la~~L~~~ga~V~v~~~~t------------~~l~~~l~~ADIVIsa~g-~p---~~i~~~~---vk~g~vvi 205 (272)
|.+ |+-++..+...|..|.-.+--+ -+++|.+..||+|-.-++ .| ++++.+- .|+|..||
T Consensus 155 GrI-GseVA~r~k~~gm~vI~~dpi~~~~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~lin~~tfA~mKkGVriI 233 (406)
T KOG0068|consen 155 GRI-GSEVAVRAKAMGMHVIGYDPITPMALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLLNDETFAKMKKGVRII 233 (406)
T ss_pred ccc-hHHHHHHHHhcCceEEeecCCCchHHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhccCHHHHHHhhCCcEEE
Confidence 996 9999999999998877776433 257899999999876555 23 3565553 48899998
Q ss_pred EeeeC
Q 024103 206 DVGTC 210 (272)
Q Consensus 206 Dig~~ 210 (272)
+++--
T Consensus 234 N~aRG 238 (406)
T KOG0068|consen 234 NVARG 238 (406)
T ss_pred EecCC
Confidence 87643
No 249
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=95.78 E-value=0.03 Score=52.47 Aligned_cols=56 Identities=23% Similarity=0.386 Sum_probs=44.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC--------------------------CCHhhhcCCCcEEEEe
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT--------------------------KNPEQITSEADIVIAA 186 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t--------------------------~~l~~~l~~ADIVIsa 186 (272)
++.+||.|||+|. +|..++..++..| +++.+.+.+. .+ .+.+++||+||.+
T Consensus 4 ~~~~KI~IIGaG~-vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d-~~~l~~aDiVI~t 81 (321)
T PTZ00082 4 IKRRKISLIGSGN-IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNN-YEDIAGSDVVIVT 81 (321)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCC-HHHhCCCCEEEEC
Confidence 3558999999977 5999999999888 4888887532 23 3678999999999
Q ss_pred cCCCc
Q 024103 187 AGVAN 191 (272)
Q Consensus 187 ~g~p~ 191 (272)
.|.|.
T Consensus 82 ag~~~ 86 (321)
T PTZ00082 82 AGLTK 86 (321)
T ss_pred CCCCC
Confidence 98653
No 250
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=95.76 E-value=0.035 Score=51.56 Aligned_cols=86 Identities=15% Similarity=0.191 Sum_probs=58.9
Q ss_pred HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-------------------CCHhhhcC---CC
Q 024103 124 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQITS---EA 180 (272)
Q Consensus 124 ~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t-------------------~~l~~~l~---~A 180 (272)
+..+++.+. ..|++|+|.|+|. +|..+++++...|+ .|+++.+.. .++.+.++ ..
T Consensus 159 ~~al~~~~~-~~g~~VlV~G~G~-vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~ 236 (343)
T PRK09880 159 IHAAHQAGD-LQGKRVFVSGVGP-IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYF 236 (343)
T ss_pred HHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCC
Confidence 344544433 3799999999865 69999999999998 576665431 12222222 27
Q ss_pred cEEEEecCCCccc--cCCCcCCCcEEEEeeeCC
Q 024103 181 DIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 181 DIVIsa~g~p~~i--~~~~vk~g~vviDig~~~ 211 (272)
|+||.++|.+..+ --+.++++-.++.+|...
T Consensus 237 D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~ 269 (343)
T PRK09880 237 DVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGG 269 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCC
Confidence 9999999986533 234678888888988643
No 251
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.013 Score=52.46 Aligned_cols=38 Identities=24% Similarity=0.322 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++||.++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998778999999999999999998875
No 252
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.74 E-value=0.017 Score=50.59 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 5789999999998888999999999999999888764
No 253
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.74 E-value=0.026 Score=50.11 Aligned_cols=37 Identities=27% Similarity=0.258 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999888765
No 254
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.011 Score=52.08 Aligned_cols=38 Identities=29% Similarity=0.354 Sum_probs=34.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~ 41 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDA 41 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 47899999999998899999999999999999988764
No 255
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.71 E-value=0.02 Score=56.73 Aligned_cols=73 Identities=19% Similarity=0.308 Sum_probs=55.4
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcC---CCcEEEEecCCCccc
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITS---EADIVIAAAGVANLV 193 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~---------------------~l~~~l~---~ADIVIsa~g~p~~i 193 (272)
+|-+||-|.+ |++++..|++.|.+|+++||+.. ++++.++ ++|+||+.+..+..+
T Consensus 8 ~IG~IGLG~M-G~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV 86 (493)
T PLN02350 8 RIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV 86 (493)
T ss_pred CEEEEeeHHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence 6899999886 99999999999999999998731 2223343 499999998865422
Q ss_pred ----c--CCCcCCCcEEEEeeeCC
Q 024103 194 ----R--GSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 194 ----~--~~~vk~g~vviDig~~~ 211 (272)
+ ...+++|.++||.+...
T Consensus 87 ~~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 87 DQTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred HHHHHHHHhhcCCCCEEEECCCCC
Confidence 1 12467899999998763
No 256
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.69 E-value=0.011 Score=52.08 Aligned_cols=38 Identities=21% Similarity=0.278 Sum_probs=34.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~ 43 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA 43 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH
Confidence 57899999999998899999999999999999988763
No 257
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.69 E-value=0.015 Score=47.18 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=29.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
+.++|+|+|.|+. |..++..|+..|. .+++++..
T Consensus 1 r~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 1 RNKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp HT-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEESS
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHhCCCceeecCCc
Confidence 4689999999995 9999999999997 89999754
No 258
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.69 E-value=0.015 Score=55.84 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=55.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCC---------------------CCHh-hhcCCCcEEEEecCCC-
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALT---------------------KNPE-QITSEADIVIAAAGVA- 190 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~-ga~V~v~~~~t---------------------~~l~-~~l~~ADIVIsa~g~p- 190 (272)
.-++|.|+|++|.+|+.+..+|.++ +.+++.+.+.. .+++ +.++++|+||.|+|..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5579999999999999999999988 57877766431 0011 1247899999999852
Q ss_pred --ccccCCCcCCCcEEEEeeeCCC
Q 024103 191 --NLVRGSWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 191 --~~i~~~~vk~g~vviDig~~~~ 212 (272)
++++. + +.|+.|||++....
T Consensus 117 s~~i~~~-~-~~g~~VIDlSs~fR 138 (381)
T PLN02968 117 TQEIIKA-L-PKDLKIVDLSADFR 138 (381)
T ss_pred HHHHHHH-H-hCCCEEEEcCchhc
Confidence 23333 3 57899999987653
No 259
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.013 Score=52.02 Aligned_cols=39 Identities=36% Similarity=0.421 Sum_probs=35.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+++||.++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~ 42 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDE 42 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 468899999999988899999999999999999988763
No 260
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.67 E-value=0.024 Score=55.86 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=53.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhhhcC---CCcEEEEecCCCcc-
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITS---EADIVIAAAGVANL- 192 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~--------------------~l~~~l~---~ADIVIsa~g~p~~- 192 (272)
.++.|||.|.+ |.++|..|+++|.+|++.+|+.+ ++++.++ ++|+||..+..+..
T Consensus 2 ~~IgvIGLG~M-G~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v 80 (470)
T PTZ00142 2 SDIGLIGLAVM-GQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAV 80 (470)
T ss_pred CEEEEEeEhHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHH
Confidence 36899999886 99999999999999999998632 2334443 47988876654331
Q ss_pred ---cc--CCCcCCCcEEEEeeeC
Q 024103 193 ---VR--GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 193 ---i~--~~~vk~g~vviDig~~ 210 (272)
+. ...+++|.+|||.+..
T Consensus 81 ~~vi~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 81 DETIDNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHHHHHHHhhCCCCCEEEECCCC
Confidence 21 1346789999999865
No 261
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.67 E-value=0.029 Score=52.70 Aligned_cols=51 Identities=22% Similarity=0.149 Sum_probs=43.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC----------------------------------CCCHhhhcCCCcE
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------------TKNPEQITSEADI 182 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~----------------------------------t~~l~~~l~~ADI 182 (272)
++|.|||+|-+ |..++..++..|..|++.++. +.++++.+++||+
T Consensus 8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 68999999875 999999999999999999754 1245677899999
Q ss_pred EEEecC
Q 024103 183 VIAAAG 188 (272)
Q Consensus 183 VIsa~g 188 (272)
||-++.
T Consensus 87 ViEavp 92 (321)
T PRK07066 87 IQESAP 92 (321)
T ss_pred EEECCc
Confidence 999887
No 262
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.66 E-value=0.017 Score=51.96 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=30.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~ 168 (272)
.|+.++|+|+|.|+. |..++.+|+..|. ++++++.
T Consensus 29 ~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 29 KLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred HhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence 468999999999995 9999999999995 8888864
No 263
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.65 E-value=0.017 Score=52.88 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=29.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++|.|||+|.+ |.+++..|+..|..|++++++
T Consensus 4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 68999999885 999999999999999999865
No 264
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.65 E-value=0.028 Score=51.65 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=29.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++|.|||+|.+ |.++|..|+..|..|++.+++
T Consensus 6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~ 37 (286)
T PRK07819 6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETT 37 (286)
T ss_pred cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECC
Confidence 48999999886 999999999999999999865
No 265
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.014 Score=51.16 Aligned_cols=38 Identities=26% Similarity=0.385 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~ 39 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDA 39 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCH
Confidence 47899999999999999999999999999998887653
No 266
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.019 Score=50.73 Aligned_cols=40 Identities=23% Similarity=0.247 Sum_probs=35.3
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++++||+++|.|+++-+|+.++..|+++|+.|.++.|+.
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~ 41 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA 41 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCCh
Confidence 3678999999999998899999999999999988876643
No 267
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.013 Score=51.92 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=33.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998889999999999999999988775
No 268
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.62 E-value=0.023 Score=52.39 Aligned_cols=51 Identities=14% Similarity=0.077 Sum_probs=41.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCcEEEEecC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAG 188 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~---------------------~l~~~l~~ADIVIsa~g 188 (272)
+|+|.|++|.+|+.++..|.++|.+|+++.|+.. ++.+.++.+|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 7999999999999999999999999998877521 23456778888887665
No 269
>PRK05717 oxidoreductase; Validated
Probab=95.61 E-value=0.014 Score=51.52 Aligned_cols=39 Identities=21% Similarity=0.160 Sum_probs=34.7
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
...++||+++|.|+++.+|+.++..|+++|++|.++.++
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 457899999999998889999999999999999988654
No 270
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.61 E-value=0.017 Score=51.30 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 39 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA 39 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36899999999988889999999999999999987753
No 271
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.61 E-value=0.028 Score=50.81 Aligned_cols=92 Identities=17% Similarity=0.261 Sum_probs=61.3
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCCC-----------------CH----h
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTK-----------------NP----E 174 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~-V~v~~~~t~-----------------~l----~ 174 (272)
+|....++..+++... ..|++|+|+|+|. +|..+++++..+|++ |+++.+..+ +. .
T Consensus 103 ~~~~~ta~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~ 180 (280)
T TIGR03366 103 GCATATVMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQG 180 (280)
T ss_pred hhHHHHHHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHH
Confidence 3333334445555443 4899999999976 699999999999986 777654311 11 1
Q ss_pred hhc--CCCcEEEEecCCCccc--cCCCcCCCcEEEEeeeC
Q 024103 175 QIT--SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 175 ~~l--~~ADIVIsa~g~p~~i--~~~~vk~g~vviDig~~ 210 (272)
+.. +.+|+||.++|.+..+ --+.++++..++-+|..
T Consensus 181 ~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 220 (280)
T TIGR03366 181 GLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSV 220 (280)
T ss_pred HHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccC
Confidence 111 3489999999977543 23467888888888853
No 272
>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed
Probab=95.61 E-value=0.22 Score=47.06 Aligned_cols=152 Identities=16% Similarity=0.152 Sum_probs=94.8
Q ss_pred chHHHHHHHHHHHHHcCCeEEEEEcCCC--------------CCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCC-----
Q 024103 21 DSQTYVRNKIKACEEVGIKSIVTEFADG--------------CTEDEVLNALSNYNQDSSINGILVQLPLPQHLD----- 81 (272)
Q Consensus 21 ~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~--------------~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~----- 81 (272)
.|..=--+-..++.++|.++.+..-... ...+.+.+.++-|+.- +|+|.+--|-.. .+
T Consensus 48 pSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~~e~~~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~g-~~~~~~~ 124 (335)
T PRK04523 48 PSLRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFELGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPKF-VDWSKDR 124 (335)
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCcccccchhhcccccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCccc-cccccch
Confidence 3443344566789999999887743321 1235567777777763 788888765221 10
Q ss_pred HHHHHhcCCcccccCccccccccccccCCCCCccccCCHHHH-HHHHHHhCCCC-ccceEEEEcCC------cccHHHHH
Q 024103 82 EGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGC-IELLIRSGVEI-MGKNAVVIGRS------NIVGLPTS 153 (272)
Q Consensus 82 ~~~i~~~i~p~KDvdg~~~~n~g~l~~~~~~~~~~p~Ta~g~-~~~l~~~~~~l-~gk~v~ViG~g------~~vG~~la 153 (272)
....++.+...- .+-.+|. + .. +.||=+.+= +.+.++.| .+ +|++++|++.| ..|.+.++
T Consensus 125 ~~~~~~~~a~~s---~vPVINa-----~--~~-~HPtQaLaDl~Ti~e~~g-~~~~g~ki~i~~~gd~~~~~~~v~~S~~ 192 (335)
T PRK04523 125 QDQVLNSFAKYS---TVPVINM-----E--TI-THPCQELAHALALQEHFG-TTLRGKKYVLTWTYHPKPLNTAVANSAL 192 (335)
T ss_pred hHHHHHHHHHhC---CCCEEEC-----C--CC-CChHHHHHHHHHHHHHhC-CccCCCEEEEEEeccCcccccHHHHHHH
Confidence 112222222211 2344454 2 23 779988884 44444444 58 89999887643 24688999
Q ss_pred HHHHhCCCEEEEEeC-C-------------------------CCCHhhhcCCCcEEEEec
Q 024103 154 LLLQRHHATVSIVHA-L-------------------------TKNPEQITSEADIVIAAA 187 (272)
Q Consensus 154 ~~L~~~ga~V~v~~~-~-------------------------t~~l~~~l~~ADIVIsa~ 187 (272)
..+...|++|++++- . +.++.+.++.||+|.+-.
T Consensus 193 ~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~~ 252 (335)
T PRK04523 193 LIATRLGMDVTLLCPTPDYILDERYMDWAEQNAAESGGSLTVSHDIDSAYAGADVVYAKS 252 (335)
T ss_pred HHHHHcCCEEEEECCchhhCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEece
Confidence 999999999999986 2 135578899999998543
No 273
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.61 E-value=0.025 Score=52.30 Aligned_cols=53 Identities=21% Similarity=0.239 Sum_probs=43.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------------------CCHhhhcC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------------KNPEQITS 178 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------------------------------~~l~~~l~ 178 (272)
++|.|||.|-+ |.+++..|++.|.+|++++++. .++.+.++
T Consensus 3 ~~V~VIG~G~m-G~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~ 81 (308)
T PRK06129 3 GSVAIIGAGLI-GRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA 81 (308)
T ss_pred cEEEEECccHH-HHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence 47999998775 9999999999999999998752 23445678
Q ss_pred CCcEEEEecCCC
Q 024103 179 EADIVIAAAGVA 190 (272)
Q Consensus 179 ~ADIVIsa~g~p 190 (272)
++|+||.+++..
T Consensus 82 ~ad~Vi~avpe~ 93 (308)
T PRK06129 82 DADYVQESAPEN 93 (308)
T ss_pred CCCEEEECCcCC
Confidence 999999998753
No 274
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.60 E-value=0.06 Score=51.11 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=68.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHh-CCCE---EEEEeCCC----------CC-----H-hhhcCCCcEEEEecCCCc--c
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQR-HHAT---VSIVHALT----------KN-----P-EQITSEADIVIAAAGVAN--L 192 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~-~ga~---V~v~~~~t----------~~-----l-~~~l~~ADIVIsa~g~p~--~ 192 (272)
++.+|.|||++|.+|+-+..+|.+ .... +..+.+.. ++ + .+..++.|+|+.|+|..- -
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~~~~~~~~Divf~a~~~~~s~~ 83 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAKINSFEGVDIAFFSAGGEVSRQ 83 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCCHHHhcCCCEEEECCChHHHHH
Confidence 456899999999999999999994 5555 54454331 01 1 123478999999987431 1
Q ss_pred ccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceEeccCCCcccHHHHHHH
Q 024103 193 VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAML 257 (272)
Q Consensus 193 i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~~tpvpGGvGp~T~amL 257 (272)
+-+...+.|+.|||.+....- ++.. --.+-.++.+.+++..+ +-..|| -.|++|+
T Consensus 84 ~~~~~~~~G~~VID~Ss~fR~---~~~v---plvvPEvN~e~i~~~~~-iIanPn---C~tt~~~ 138 (347)
T PRK06728 84 FVNQAVSSGAIVIDNTSEYRM---AHDV---PLVVPEVNAHTLKEHKG-IIAVPN---CSALQMV 138 (347)
T ss_pred HHHHHHHCCCEEEECchhhcC---CCCC---CeEeCCcCHHHHhccCC-EEECCC---CHHHHHH
Confidence 223344679999999876542 1111 12344555444444324 334776 4455555
No 275
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.60 E-value=0.015 Score=54.77 Aligned_cols=76 Identities=22% Similarity=0.246 Sum_probs=52.1
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC---------------CCHh-hhcCCCcEEEEecCCCc--ccc
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNPE-QITSEADIVIAAAGVAN--LVR 194 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga---~V~v~~~~t---------------~~l~-~~l~~ADIVIsa~g~p~--~i~ 194 (272)
+++|.|+|++|.+|+.++.+|.+++. ++....+.. .++. ..++.+|+||.|+|... -+-
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~ 80 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA 80 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH
Confidence 46899999999999999999998764 445554331 0111 23468999999997432 122
Q ss_pred CCCcCCCcEEEEeeeCC
Q 024103 195 GSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 195 ~~~vk~g~vviDig~~~ 211 (272)
+..++.|++|||....+
T Consensus 81 ~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 81 PKAAAAGAVVIDNSSAF 97 (334)
T ss_pred HHHHhCCCEEEECCchh
Confidence 23456788999998664
No 276
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.017 Score=50.98 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL 43 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 47899999999987789999999999999999987753
No 277
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.022 Score=50.21 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=34.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++|+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~ 45 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSE 45 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47999999999999999999999999999998887753
No 278
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.016 Score=51.56 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA 40 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999988789999999999999999988764
No 279
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.014 Score=51.56 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=33.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++||+++|+|+++-+|+.++..|+++|++|.++.|+.
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~ 41 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP 41 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 6899999999988899999999999999999987764
No 280
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.56 E-value=0.032 Score=48.53 Aligned_cols=54 Identities=19% Similarity=0.137 Sum_probs=45.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhcCCCcEEEEecCCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------------~~l~~~l~~ADIVIsa~g~p 190 (272)
+|+.|||++|-+|.-++.-+.++|.+||.+-|+. ..+.+.+..-|+||+|.|.+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 4799999999999999999999999999887763 12346788899999999854
No 281
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=95.55 E-value=0.028 Score=54.17 Aligned_cols=71 Identities=28% Similarity=0.335 Sum_probs=53.1
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------------------------CHhhhcCCCcEE
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------------------NPEQITSEADIV 183 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~----------------------------------~l~~~l~~ADIV 183 (272)
+|.|||.|.+ |.+++..|++.|.+|++++++.. ++.+.+++||+|
T Consensus 2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI 80 (411)
T ss_pred EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence 6899999885 99999999999999999986531 223457889999
Q ss_pred EEecCCCcc---------cc------CCCcCCCcEEEEeee
Q 024103 184 IAAAGVANL---------VR------GSWLKPGAVVLDVGT 209 (272)
Q Consensus 184 Isa~g~p~~---------i~------~~~vk~g~vviDig~ 209 (272)
|.+++.|.- +. ...+++|.+|+|...
T Consensus 81 ii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~ST 121 (411)
T TIGR03026 81 IICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLEST 121 (411)
T ss_pred EEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 999987631 11 123467888888764
No 282
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.55 E-value=0.024 Score=50.14 Aligned_cols=38 Identities=24% Similarity=0.265 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999999888765
No 283
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.018 Score=50.70 Aligned_cols=37 Identities=24% Similarity=0.237 Sum_probs=33.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++|+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~ 39 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTA 39 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 5789999999998899999999999999999887653
No 284
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.53 E-value=0.034 Score=54.45 Aligned_cols=123 Identities=17% Similarity=0.143 Sum_probs=67.4
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCc-CCCcEEEEeeeCCCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWL-KPGAVVLDVGTCPVD 213 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~v-k~g~vviDig~~~~~ 213 (272)
.||+|+|+|.|.. |++++..|. +|++|++.+.+.....+.-+.-+..+ .|. + +.+.+ ....+|+-=|+++..
T Consensus 5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~d~vV~SPgI~~~~ 77 (454)
T PRK01368 5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNA--IAA-L--SDSRWQNLDKIVLSPGIPLTH 77 (454)
T ss_pred CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCce--ecc-C--ChhHhhCCCEEEECCCCCCCC
Confidence 5899999999998 999999998 59999999855432211100001111 111 0 00111 123445555555431
Q ss_pred CCCCCCCCCCceEecccchhh-hhhhceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 214 VSVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 214 ~~~~~~~~~~~k~~Gdvd~~~-~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
.........+-++.+++++-. ..+... +--|-|--|.=|+.-|+.++++..
T Consensus 78 p~~~~a~~~gi~v~~e~el~~~~~~~~~-~IaVTGTnGKTTTt~ll~~iL~~~ 129 (454)
T PRK01368 78 EIVKIAKNFNIPITSDIDLLFEKSKNLK-FIAITGTNGKSTTTALISHILNSN 129 (454)
T ss_pred HHHHHHHHCCCceecHHHHHHHHhcCCC-EEEEECCCcHHHHHHHHHHHHHhc
Confidence 000000001235788887632 111111 223668889999999999998764
No 285
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=95.51 E-value=0.074 Score=50.44 Aligned_cols=78 Identities=21% Similarity=0.274 Sum_probs=55.4
Q ss_pred cccCCHHHHHHHHHHhC------CCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC-----------------
Q 024103 115 FIPCTPKGCIELLIRSG------VEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT----------------- 170 (272)
Q Consensus 115 ~~p~Ta~g~~~~l~~~~------~~l~gk~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t----------------- 170 (272)
-+|.++.-.++.|-+.. -.=+|+.++|+|+|+.||..+++.+...| +.|+.+.+..
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~ 210 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYK 210 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCC
Confidence 34666666666666555 44579999999999999999999999999 5655554432
Q ss_pred -CCHhhhcCC-----CcEEEEecCCCcc
Q 024103 171 -KNPEQITSE-----ADIVIAAAGVANL 192 (272)
Q Consensus 171 -~~l~~~l~~-----ADIVIsa~g~p~~ 192 (272)
.+..+.++. .|+|+-++|.+.+
T Consensus 211 ~~~~~e~~kk~~~~~~DvVlD~vg~~~~ 238 (347)
T KOG1198|consen 211 DENVVELIKKYTGKGVDVVLDCVGGSTL 238 (347)
T ss_pred CHHHHHHHHhhcCCCccEEEECCCCCcc
Confidence 233444444 7999988887543
No 286
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.50 E-value=0.021 Score=52.27 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=29.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++|.|||+|.+ |.+++..|+..|.+|++.+++
T Consensus 5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCC
Confidence 68999999886 999999999999999999865
No 287
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=95.49 E-value=0.013 Score=57.43 Aligned_cols=56 Identities=23% Similarity=0.304 Sum_probs=46.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhcCCCcEEEEecCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------------~~l~~~l~~ADIVIsa~g~ 189 (272)
.|+||+|+|||.|.. |++-|..|...|.+|++.-|.. .++.+.++.||+|+..++-
T Consensus 33 ~LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPD 107 (487)
T PRK05225 33 YLKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPD 107 (487)
T ss_pred HhCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCCh
Confidence 368999999999885 9999999999999988554431 3567889999999999883
No 288
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=95.48 E-value=0.035 Score=54.35 Aligned_cols=53 Identities=25% Similarity=0.178 Sum_probs=44.5
Q ss_pred ccCCHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeCC
Q 024103 116 IPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHAL 169 (272)
Q Consensus 116 ~p~Ta~g~~~~----l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~-v~~~~ 169 (272)
.++|.+|++.. ++..+.+++||+|+|=|.|. ||..++..|.+.|++|+ +++++
T Consensus 213 ~eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~Gn-Vg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 213 PEATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGN-VAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CcccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcCC
Confidence 36798886544 55678899999999999988 59999999999999877 77665
No 289
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=95.47 E-value=0.04 Score=51.69 Aligned_cols=93 Identities=17% Similarity=0.206 Sum_probs=61.3
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------------Hhh
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQ 175 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~---------------------l~~ 175 (272)
||........+...+....|.+++|.|.|. +|..+++++..+|+.|+++.+..+. +.+
T Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhHHHHHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 333333445555555555799999999866 6999999999999987766543211 112
Q ss_pred hcCCCcEEEEecCCCcccc--CCCcCCCcEEEEeeeC
Q 024103 176 ITSEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 176 ~l~~ADIVIsa~g~p~~i~--~~~vk~g~vviDig~~ 210 (272)
.....|++|.++|.+..+. -+.++++..++.+|..
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVI 277 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence 2234699999988654321 2456787788888864
No 290
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=95.46 E-value=0.034 Score=51.00 Aligned_cols=90 Identities=13% Similarity=-0.038 Sum_probs=57.6
Q ss_pred HHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------CCHhhhc---
Q 024103 121 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQIT--- 177 (272)
Q Consensus 121 ~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------------~~l~~~l--- 177 (272)
...+..+.+...--.|.+|+|.|+++.+|..+++++..+|++|+.+.++. .+..+.+
T Consensus 124 ~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~ 203 (325)
T TIGR02825 124 LTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKA 203 (325)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHh
Confidence 33344443333334789999999867689999999999999887665431 1122211
Q ss_pred --CCCcEEEEecCCCccc-cCCCcCCCcEEEEeeeC
Q 024103 178 --SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 178 --~~ADIVIsa~g~p~~i-~~~~vk~g~vviDig~~ 210 (272)
+..|+|+.++|.+.+- .-++++++..++.+|..
T Consensus 204 ~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 204 SPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAI 239 (325)
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecch
Confidence 2368888888865431 12456777777788753
No 291
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.44 E-value=0.025 Score=49.85 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=31.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.++.++|+|+|.|+. |..++..|...|. ++++++..
T Consensus 25 ~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 368899999999996 9999999999996 68888754
No 292
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.44 E-value=0.035 Score=54.49 Aligned_cols=126 Identities=17% Similarity=0.204 Sum_probs=72.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-CHhh--hcCCCcEEEEecCCCccccCCCcC-CCcEEEEeee
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQ--ITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGT 209 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-~l~~--~l~~ADIVIsa~g~p~~i~~~~vk-~g~vviDig~ 209 (272)
++||+++|+|.|.. |++++..|.++|+.|++.+.+.. ...+ .+++ ++.....+.+ ++.+. ...+|+--|+
T Consensus 6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~----~~~~~~~d~vV~SpgI 79 (468)
T PRK04690 6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALAD-AALLVETEAS----AQRLAAFDVVVKSPGI 79 (468)
T ss_pred cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhh-cCEEEeCCCC----hHHccCCCEEEECCCC
Confidence 46899999999998 99999999999999999885432 2211 2333 3222222211 11221 2445666666
Q ss_pred CCCCCCCCCCCCCCceEecccch--hhhhh-h--ceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 210 CPVDVSVDPSCEYGYRLMGDVCY--EEAMR-L--ASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 210 ~~~~~~~~~~~~~~~k~~Gdvd~--~~~~~-~--~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
++...........+-++.+++++ ....+ . ...+--|-|-.|.=|+.-|+.++++..
T Consensus 80 ~~~~p~~~~a~~~~i~i~~~~el~~~~~~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~ 140 (468)
T PRK04690 80 SPYRPEALAAAARGTPFIGGTALWFAEHAARDGVVPGTVCVTGTKGKSTTTALLAHLLRAA 140 (468)
T ss_pred CCCCHHHHHHHHcCCcEEEHHHHHHHHHhhccCCCCCEEEEeCCCCHHHHHHHHHHHHHhc
Confidence 65420000000112357888875 11111 0 011223668899999999999998764
No 293
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.44 E-value=0.019 Score=50.77 Aligned_cols=39 Identities=28% Similarity=0.331 Sum_probs=34.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+++||+++|.|+++.+|..++..|+++|++|+++.|+.
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~ 46 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKA 46 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 457899999999988899999999999999999988753
No 294
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.44 E-value=0.028 Score=49.16 Aligned_cols=52 Identities=13% Similarity=0.050 Sum_probs=43.2
Q ss_pred EEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------------------CCHhhhcCCCcEEEEecCCC
Q 024103 139 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------KNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 139 v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-----------------------~~l~~~l~~ADIVIsa~g~p 190 (272)
|+|+|+.|.+|++++..|...+.+|+++.|+. +.|.+.++.+|.||..++..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence 68999988899999999999999999998863 23456788899999888843
No 295
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.43 E-value=0.027 Score=52.24 Aligned_cols=36 Identities=14% Similarity=0.095 Sum_probs=31.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~g--a~V~v~~~~ 169 (272)
++||+++|.|+++.+|+.++..|+++| .+|+++.|.
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 478999999999889999999999886 688887654
No 296
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.43 E-value=0.017 Score=51.37 Aligned_cols=39 Identities=21% Similarity=0.255 Sum_probs=35.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+++||+++|.|+++.+|+.++..|+++|++|.+..++.
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~ 44 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ 44 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 467999999999999999999999999999998887654
No 297
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.026 Score=49.23 Aligned_cols=38 Identities=24% Similarity=0.203 Sum_probs=34.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~ 40 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ 40 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence 47899999999988899999999999999999988765
No 298
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=95.41 E-value=0.054 Score=52.21 Aligned_cols=95 Identities=20% Similarity=0.304 Sum_probs=63.7
Q ss_pred cCCHHHHHHHHHHh---CCCCccceEEEEcCC----------------cccHHHHHHHHHhCCCEEEEEeCCC-------
Q 024103 117 PCTPKGCIELLIRS---GVEIMGKNAVVIGRS----------------NIVGLPTSLLLQRHHATVSIVHALT------- 170 (272)
Q Consensus 117 p~Ta~g~~~~l~~~---~~~l~gk~v~ViG~g----------------~~vG~~la~~L~~~ga~V~v~~~~t------- 170 (272)
+++++-++..+.+. +-+++||+++|-|.+ |-.|.+++..|..+|++|+++++..
T Consensus 163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~ 242 (390)
T TIGR00521 163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG 242 (390)
T ss_pred CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence 67778777766643 246999999999873 3359999999999999999987542
Q ss_pred ---------CCH-h----hhcCCCcEEEEecCCCcccc----CCCcCC--CcEEEEeeeCC
Q 024103 171 ---------KNP-E----QITSEADIVIAAAGVANLVR----GSWLKP--GAVVLDVGTCP 211 (272)
Q Consensus 171 ---------~~l-~----~~l~~ADIVIsa~g~p~~i~----~~~vk~--g~vviDig~~~ 211 (272)
.++ + +...+.|++|.+.+...+-. ..-+++ ....+.+--+|
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~p 303 (390)
T TIGR00521 243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNP 303 (390)
T ss_pred cEEEEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCc
Confidence 122 1 23356899998888655421 223443 23445555554
No 299
>PLN02858 fructose-bisphosphate aldolase
Probab=95.39 E-value=0.027 Score=62.19 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=58.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCcc----c-cC-
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-RG- 195 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~~----i-~~- 195 (272)
-++|.+||-|.+ |.+++..|...|.+|++++++. .+..+.++++|+||++++.|.. + ..
T Consensus 324 ~~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 324 VKRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 488999999886 9999999999999999998763 2456778999999999986542 2 11
Q ss_pred ---CCcCCCcEEEEeeeC
Q 024103 196 ---SWLKPGAVVLDVGTC 210 (272)
Q Consensus 196 ---~~vk~g~vviDig~~ 210 (272)
+.+++|.++||+...
T Consensus 403 g~~~~l~~g~ivVd~STv 420 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTV 420 (1378)
T ss_pred hHHhcCCCCCEEEECCCC
Confidence 234778899998763
No 300
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.028 Score=49.42 Aligned_cols=38 Identities=26% Similarity=0.376 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998888999999999999999988875
No 301
>PRK07060 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.023 Score=49.52 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=34.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+++||+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~ 43 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA 43 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999987789999999999999999988754
No 302
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.38 E-value=0.022 Score=54.33 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=32.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.+++++|+|+|.|+. |..++.+|+..|. ++++++..
T Consensus 132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 468999999999996 9999999999997 89998754
No 303
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.37 E-value=0.026 Score=50.75 Aligned_cols=71 Identities=20% Similarity=0.244 Sum_probs=50.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC----------------CCHhhhcCCCcEEEEecCCCc---cccC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVRG 195 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga---~V~v~~~~t----------------~~l~~~l~~ADIVIsa~g~p~---~i~~ 195 (272)
++.+||.|.+ |.+++..|.+.|. .+.+++|+. .+..+.++++|+||.++.... ++..
T Consensus 2 ~IgiIG~G~m-G~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~~~~vl~~ 80 (258)
T PRK06476 2 KIGFIGTGAI-TEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQIAEEVLRA 80 (258)
T ss_pred eEEEECcCHH-HHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHHHHHHHHH
Confidence 6899999886 9999999998874 356777642 234456788999999998322 2222
Q ss_pred CCcCCCcEEEEeee
Q 024103 196 SWLKPGAVVLDVGT 209 (272)
Q Consensus 196 ~~vk~g~vviDig~ 209 (272)
-+++++.+||++.-
T Consensus 81 l~~~~~~~vis~~a 94 (258)
T PRK06476 81 LRFRPGQTVISVIA 94 (258)
T ss_pred hccCCCCEEEEECC
Confidence 23567777877653
No 304
>PRK06182 short chain dehydrogenase; Validated
Probab=95.36 E-value=0.03 Score=50.05 Aligned_cols=35 Identities=29% Similarity=0.139 Sum_probs=31.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++|+++|.|+++-+|+.++..|.++|++|+++.|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999998778999999999999999988775
No 305
>PRK09186 flagellin modification protein A; Provisional
Probab=95.36 E-value=0.02 Score=50.33 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=33.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~ 38 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK 38 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh
Confidence 5789999999988889999999999999999887654
No 306
>PRK09242 tropinone reductase; Provisional
Probab=95.36 E-value=0.017 Score=51.10 Aligned_cols=39 Identities=26% Similarity=0.252 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
..++||+++|.|+++-+|+.++..|.++|++|+++.|+.
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~ 43 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDA 43 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 357899999999988889999999999999999887653
No 307
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=95.32 E-value=0.043 Score=51.59 Aligned_cols=70 Identities=23% Similarity=0.291 Sum_probs=53.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC----------------------------CCCHhhhcCCCcEEEEecC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAAAG 188 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~----------------------------t~~l~~~l~~ADIVIsa~g 188 (272)
++|.|+|+|.- |.++|..|.+.|..|++-.|+ +.++.+.+++||+||-+++
T Consensus 2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 58999999886 999999999999888887653 2578899999999999998
Q ss_pred CCcc---cc--CCCcCCCcEEEEe
Q 024103 189 VANL---VR--GSWLKPGAVVLDV 207 (272)
Q Consensus 189 ~p~~---i~--~~~vk~g~vviDi 207 (272)
+-.+ ++ +..++++..++-+
T Consensus 81 s~~~r~v~~~l~~~l~~~~~iv~~ 104 (329)
T COG0240 81 SQALREVLRQLKPLLLKDAIIVSA 104 (329)
T ss_pred hHHHHHHHHHHhhhccCCCeEEEE
Confidence 6321 11 1345566666554
No 308
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=95.31 E-value=0.065 Score=50.91 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHHhCCC-CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------------Hh
Q 024103 117 PCTPKGCIELLIRSGVE-IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PE 174 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~-l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~---------------------l~ 174 (272)
+|....++..+...+.. -.|.+++|.|.|. +|..+++++..+|++|+++.+..+. +.
T Consensus 159 ~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~ 237 (375)
T PLN02178 159 LCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMK 237 (375)
T ss_pred hccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHH
Confidence 44444455555555443 3699999999876 6999999999999988776543211 11
Q ss_pred hhcCCCcEEEEecCCCccc--cCCCcCCCcEEEEeeeC
Q 024103 175 QITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 175 ~~l~~ADIVIsa~g~p~~i--~~~~vk~g~vviDig~~ 210 (272)
+.+..+|+|+.++|.+..+ --+.++++-.++.+|..
T Consensus 238 ~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~ 275 (375)
T PLN02178 238 EAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLP 275 (375)
T ss_pred HhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccC
Confidence 1223479999999876432 22456787778888864
No 309
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=95.30 E-value=0.036 Score=51.60 Aligned_cols=70 Identities=23% Similarity=0.289 Sum_probs=51.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------CHhhhcCCCcEEEEec
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVIAAA 187 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-----------------------------~l~~~l~~ADIVIsa~ 187 (272)
.+|.|||.|.+ |.+++..|.+.|.+|++++|... ...+.++.+|+||.++
T Consensus 3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vil~v 81 (341)
T PRK08229 3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDPAALATADLVLVTV 81 (341)
T ss_pred ceEEEECCCHH-HHHHHHHHHhcCCcEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccChhhccCCCEEEEEe
Confidence 47999999885 99999999999999999986420 0113457899999999
Q ss_pred CCCcc---cc--CCCcCCCcEEEEe
Q 024103 188 GVANL---VR--GSWLKPGAVVLDV 207 (272)
Q Consensus 188 g~p~~---i~--~~~vk~g~vviDi 207 (272)
..+.. +. ...++++.+|+++
T Consensus 82 k~~~~~~~~~~l~~~~~~~~iii~~ 106 (341)
T PRK08229 82 KSAATADAAAALAGHARPGAVVVSF 106 (341)
T ss_pred cCcchHHHHHHHHhhCCCCCEEEEe
Confidence 76542 11 1235677888887
No 310
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=95.30 E-value=0.049 Score=50.01 Aligned_cols=76 Identities=12% Similarity=0.186 Sum_probs=53.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCCCCHh-----------h-hcCCCcEEEEecCCCcccc--CCCc
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTKNPE-----------Q-ITSEADIVIAAAGVANLVR--GSWL 198 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~-V~v~~~~t~~l~-----------~-~l~~ADIVIsa~g~p~~i~--~~~v 198 (272)
.+|++++|+|+|. ||..+++++...|++ |.++.++...++ + .-..+|+||.++|.+..++ -+.+
T Consensus 143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l 221 (308)
T TIGR01202 143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRL 221 (308)
T ss_pred cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHHHHHHHHhh
Confidence 4688999999877 599999999999986 445543321111 0 1134799999999876443 2567
Q ss_pred CCCcEEEEeeeC
Q 024103 199 KPGAVVLDVGTC 210 (272)
Q Consensus 199 k~g~vviDig~~ 210 (272)
+++-.++-+|..
T Consensus 222 ~~~G~iv~~G~~ 233 (308)
T TIGR01202 222 AKGGEIVLAGFY 233 (308)
T ss_pred hcCcEEEEEeec
Confidence 887777778864
No 311
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.29 E-value=0.031 Score=49.34 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=32.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998889999999999999998877553
No 312
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.29 E-value=0.043 Score=48.05 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=33.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 35789999999998888999999999999999888764
No 313
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=95.29 E-value=0.019 Score=52.84 Aligned_cols=58 Identities=33% Similarity=0.413 Sum_probs=43.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEe----------------CCC----------CCHhhhcCCCcEEEEe
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH----------------ALT----------KNPEQITSEADIVIAA 186 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~----------------~~t----------~~l~~~l~~ADIVIsa 186 (272)
.-.+.||.|+|++|-+|.|++.+|. ++-.|+-.+ -+| ++|++.++.||+||-+
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP 103 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP 103 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence 3467899999998888999998665 443333332 111 4689999999999999
Q ss_pred cCCCc
Q 024103 187 AGVAN 191 (272)
Q Consensus 187 ~g~p~ 191 (272)
.|.|.
T Consensus 104 AGVPR 108 (345)
T KOG1494|consen 104 AGVPR 108 (345)
T ss_pred CCCCC
Confidence 99765
No 314
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.018 Score=53.20 Aligned_cols=38 Identities=32% Similarity=0.295 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 36789999999998888999999999999999998875
No 315
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=95.27 E-value=0.022 Score=56.18 Aligned_cols=72 Identities=19% Similarity=0.289 Sum_probs=52.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CHhh---hcCCCcEEEEecCCCc----
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQ---ITSEADIVIAAAGVAN---- 191 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------------~l~~---~l~~ADIVIsa~g~p~---- 191 (272)
++.+||.|.+ |.+++..|++.|.+|++.+|+.. ++++ .++++|+||..+..+.
T Consensus 1 ~IG~IGLG~M-G~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~ 79 (467)
T TIGR00873 1 DIGVIGLAVM-GSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDA 79 (467)
T ss_pred CEEEEeeHHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHH
Confidence 3689999886 99999999999999999998632 1222 2346899998877533
Q ss_pred ccc--CCCcCCCcEEEEeeeC
Q 024103 192 LVR--GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 192 ~i~--~~~vk~g~vviDig~~ 210 (272)
.+. ...+++|.+|||.+..
T Consensus 80 Vi~~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 80 VINQLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred HHHHHHhhCCCCCEEEECCCc
Confidence 121 1346789999999853
No 316
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.019 Score=52.40 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=34.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+++||+++|.|+++-+|+.++..|.++|++|.++.|+.
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE 43 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999988889999999999999999888754
No 317
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.25 E-value=0.022 Score=49.61 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++|+++|.|+++.+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999999999999999999988776
No 318
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.027 Score=49.88 Aligned_cols=38 Identities=16% Similarity=0.277 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~ 41 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDA 41 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 47899999999988789999999999999999987753
No 319
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.24 E-value=0.048 Score=50.00 Aligned_cols=35 Identities=23% Similarity=0.069 Sum_probs=30.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.||+++|.|+++.+|+.++..|+++|++|+++.++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~ 38 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRD 38 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence 47999999998889999999999999998776543
No 320
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=95.23 E-value=0.042 Score=54.39 Aligned_cols=53 Identities=15% Similarity=0.086 Sum_probs=43.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------------CCHhhhcCCCcE
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI 182 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t----------------------------------~~l~~~l~~ADI 182 (272)
++|.|||.|.+ |.+++..|+..|..|++++++. .++.+.+++||+
T Consensus 5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 57999999886 9999999999999999997642 234467899999
Q ss_pred EEEecCCC
Q 024103 183 VIAAAGVA 190 (272)
Q Consensus 183 VIsa~g~p 190 (272)
||.+++-.
T Consensus 84 Vieavpe~ 91 (495)
T PRK07531 84 IQESVPER 91 (495)
T ss_pred EEEcCcCC
Confidence 99988743
No 321
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.22 E-value=0.058 Score=49.48 Aligned_cols=36 Identities=25% Similarity=0.023 Sum_probs=31.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
-.||+|+|.|++|.+|+.++..|+++|.+|+.+.|+
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 468999999999999999999999999999876554
No 322
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.021 Score=50.34 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|.+..|+.
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~ 40 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQ 40 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999988889999999999999999887753
No 323
>PRK06194 hypothetical protein; Provisional
Probab=95.21 E-value=0.023 Score=51.06 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=33.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3678999999998888999999999999999988765
No 324
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=95.20 E-value=0.061 Score=48.95 Aligned_cols=93 Identities=15% Similarity=-0.001 Sum_probs=59.1
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhc
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT 177 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------------~~l~~~l 177 (272)
|+.....+..|.+...--.|.+++|.|+++.+|..+++++...|++|+.+.++. .+..+.+
T Consensus 125 ~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v 204 (329)
T cd08294 125 GMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEAL 204 (329)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence 444444555554433334799999999877789999999999999887665431 1221111
Q ss_pred -----CCCcEEEEecCCCccc-cCCCcCCCcEEEEeee
Q 024103 178 -----SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGT 209 (272)
Q Consensus 178 -----~~ADIVIsa~g~p~~i-~~~~vk~g~vviDig~ 209 (272)
+..|+|+.++|.+.+- .-+.++++..++.+|.
T Consensus 205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242 (329)
T ss_pred HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcc
Confidence 2368888888864321 1234667666777764
No 325
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.02 Score=50.31 Aligned_cols=38 Identities=29% Similarity=0.345 Sum_probs=34.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++|+++|.|+++-+|+.++..|.++|++|.++.|+.
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~ 42 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL 42 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999999888753
No 326
>PRK06196 oxidoreductase; Provisional
Probab=95.19 E-value=0.022 Score=52.38 Aligned_cols=39 Identities=31% Similarity=0.381 Sum_probs=35.5
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
..+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 567899999999998888999999999999999998876
No 327
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.19 E-value=0.016 Score=62.13 Aligned_cols=114 Identities=16% Similarity=0.209 Sum_probs=72.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC-CE-------------EEEEeCCC-----------------------CCHhhhc
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHH-AT-------------VSIVHALT-----------------------KNPEQIT 177 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~g-a~-------------V~v~~~~t-----------------------~~l~~~l 177 (272)
+.|+|+|||+|.+ |++.+..|++.. +. |+||+++. +++.+.+
T Consensus 568 ~~~rIlVLGAG~V-G~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 568 KSQNVLILGAGRV-CRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV 646 (1042)
T ss_pred cCCcEEEECCCHH-HHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence 5789999999885 999999998753 34 88887431 1244555
Q ss_pred CCCcEEEEecCCC-cc-ccCCCcCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhhhhceE-eccCCCcccHHHH
Q 024103 178 SEADIVIAAAGVA-NL-VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASV-ITPVPGGVGPMTV 254 (272)
Q Consensus 178 ~~ADIVIsa~g~p-~~-i~~~~vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~~~~~~-~tpvpGGvGp~T~ 254 (272)
+.+|+||++++.. |. +-...++.|..++|..+...+ . ..+. +. +++++. +.+-- |.-|--.
T Consensus 647 ~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e------~---~~L~-----e~-Ak~AGV~~m~e~-GlDPGid 710 (1042)
T PLN02819 647 SQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEE------M---SALD-----SK-AKEAGITILCEM-GLDPGID 710 (1042)
T ss_pred cCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHH------H---HHHH-----HH-HHHcCCEEEECC-ccCHHHH
Confidence 7899999999853 32 444556777777887643221 0 0111 22 344442 22222 3668788
Q ss_pred HHHHHHHHHHH
Q 024103 255 AMLLSNTLDSA 265 (272)
Q Consensus 255 amL~~n~v~a~ 265 (272)
.|+..+++...
T Consensus 711 ~~lA~~~Id~~ 721 (1042)
T PLN02819 711 HMMAMKMIDDA 721 (1042)
T ss_pred HHHHHHHHHhh
Confidence 88888887765
No 328
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.19 E-value=0.024 Score=49.90 Aligned_cols=38 Identities=34% Similarity=0.412 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~ 41 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQ 41 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCh
Confidence 36799999999988899999999999999998887654
No 329
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.18 E-value=0.031 Score=53.50 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=31.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.+++++|+|+|.|+. |.+++.+|+..|. ++++++..
T Consensus 38 ~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEeCC
Confidence 468899999999996 9999999999995 89998743
No 330
>PRK08264 short chain dehydrogenase; Validated
Probab=95.18 E-value=0.031 Score=48.59 Aligned_cols=38 Identities=24% Similarity=0.173 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t 170 (272)
.+.+|+++|+|+++-+|+.++..|+++|+ +|+++.|+.
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~ 41 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP 41 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh
Confidence 36789999999988899999999999999 999998764
No 331
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.027 Score=50.30 Aligned_cols=38 Identities=26% Similarity=0.293 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++|++++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~ 39 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDE 39 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 46799999999988899999999999999999887653
No 332
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.16 E-value=0.05 Score=48.17 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=41.4
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC---CE-EEEEeCCC----------------CCHhhhcCCCcEEEEecCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHH---AT-VSIVHALT----------------KNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~g---a~-V~v~~~~t----------------~~l~~~l~~ADIVIsa~g~ 189 (272)
+..++.|||.|.+ |++++..|.+.+ .+ +++++++. .+..+.++++|+||.+++.
T Consensus 3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~ 76 (245)
T PRK07634 3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP 76 (245)
T ss_pred CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence 4678999999886 999999998776 23 66676531 2445677899999999984
No 333
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.15 E-value=0.052 Score=50.43 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=41.9
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCCC-----------------------CHhhhcCCCcEEEEecCCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK-----------------------NPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~g--a~V~v~~~~t~-----------------------~l~~~l~~ADIVIsa~g~p 190 (272)
||.|||+|. ||.+++..|+.+| .+|.+++++.. .-.+.+++||+||.++|.|
T Consensus 2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 699999977 6999999999999 47999987531 1125678999999999965
No 334
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=95.14 E-value=0.046 Score=50.99 Aligned_cols=77 Identities=27% Similarity=0.356 Sum_probs=54.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---CC------------------CHh--hhcCCCcEEEEecCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---TK------------------NPE--QITSEADIVIAAAGVA 190 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~---t~------------------~l~--~~l~~ADIVIsa~g~p 190 (272)
..|++|+|+|+|. +|..+++++...|++|+++.++ .. +.. .....+|+||.++|.+
T Consensus 171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 249 (355)
T cd08230 171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP 249 (355)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence 4799999999866 6999999999999998888762 10 110 1123479999999976
Q ss_pred cccc--CCCcCCCcEEEEeeeCC
Q 024103 191 NLVR--GSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 191 ~~i~--~~~vk~g~vviDig~~~ 211 (272)
..+. -+.++++-.++-+|...
T Consensus 250 ~~~~~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 250 PLAFEALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHHHHHHHHccCCcEEEEEecCC
Confidence 5432 24567776777777654
No 335
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.14 E-value=0.034 Score=52.81 Aligned_cols=36 Identities=22% Similarity=0.419 Sum_probs=31.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
.+++++|+|+|.|+. |.+++.+|+..|. ++++++..
T Consensus 25 ~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 25 SLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred HHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 367899999999996 9999999999995 88888643
No 336
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.13 E-value=0.044 Score=53.34 Aligned_cols=35 Identities=29% Similarity=0.253 Sum_probs=32.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++||++.|+|.|+. |++++.+|.++|++|+++++.
T Consensus 7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~ 41 (460)
T PRK01390 7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDN 41 (460)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCC
Confidence 67899999999998 999999999999999999865
No 337
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.031 Score=48.86 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|++..|..
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~ 40 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINA 40 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999988889999999999999999998763
No 338
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.023 Score=49.63 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=32.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++||+++|.|+++.+|+.++..|+++|++|++..|+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 578999999999989999999999999999888765
No 339
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=95.12 E-value=0.043 Score=51.05 Aligned_cols=54 Identities=24% Similarity=0.271 Sum_probs=47.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAG 188 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g 188 (272)
|+||+|+|||+|.- |++=+..|...|.+|++--|.. .+..+.+++||+|..-++
T Consensus 16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~P 83 (338)
T COG0059 16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLP 83 (338)
T ss_pred hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCc
Confidence 68999999999886 9999999999999999987653 356799999999999887
No 340
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.11 E-value=0.062 Score=49.53 Aligned_cols=53 Identities=26% Similarity=0.404 Sum_probs=41.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCcEEEEecCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t--------------------------~~l~~~l~~ADIVIsa~g~ 189 (272)
+||.|||+|. +|..++..++..|. +|.+++... .+. +.+++||+||.++|.
T Consensus 3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~ 80 (307)
T PRK06223 3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV 80 (307)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence 5899999966 59999999998874 888887542 122 568999999999886
Q ss_pred Cc
Q 024103 190 AN 191 (272)
Q Consensus 190 p~ 191 (272)
|.
T Consensus 81 p~ 82 (307)
T PRK06223 81 PR 82 (307)
T ss_pred CC
Confidence 54
No 341
>PRK08589 short chain dehydrogenase; Validated
Probab=95.11 E-value=0.025 Score=50.73 Aligned_cols=37 Identities=27% Similarity=0.315 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999998888999999999999999998775
No 342
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.03 Score=49.86 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=34.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~ 44 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTE 44 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47899999999999899999999999999999888753
No 343
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.11 E-value=0.023 Score=50.44 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=33.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSA 40 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6899999999988889999999999999999988753
No 344
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.04 Score=48.56 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999889999999999999999888764
No 345
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.049 Score=48.42 Aligned_cols=35 Identities=29% Similarity=0.131 Sum_probs=31.9
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++++++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999889999999999999999988876
No 346
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.09 E-value=0.061 Score=49.05 Aligned_cols=35 Identities=26% Similarity=0.116 Sum_probs=31.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+||+++|.|++|.+|+.++..|+++|.+|+++.+.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 47899999998889999999999999998877654
No 347
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.022 Score=51.46 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999998889999999999999999988765
No 348
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.08 E-value=0.054 Score=47.90 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=32.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
+++||.++|.|+++-+|++++..|+++|++|..+++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence 578999999999988899999999999999887654
No 349
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=95.07 E-value=0.06 Score=49.60 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=50.4
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------CCHhhhc-----CCCcEEEEecCC
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------KNPEQIT-----SEADIVIAAAGV 189 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t--------------------~~l~~~l-----~~ADIVIsa~g~ 189 (272)
|.+|+|.|+++.+|..+++++..+|+ .|+++.++. .++.+.+ +..|+|+.++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 48999999966679999999999998 787765432 1121111 247888888886
Q ss_pred Cccc-cCCCcCCCcEEEEeee
Q 024103 190 ANLV-RGSWLKPGAVVLDVGT 209 (272)
Q Consensus 190 p~~i-~~~~vk~g~vviDig~ 209 (272)
+.+- .-+.++++..++.+|.
T Consensus 235 ~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred HHHHHHHHHhccCCEEEEEee
Confidence 5431 1235677777788874
No 350
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=95.06 E-value=0.066 Score=49.79 Aligned_cols=53 Identities=28% Similarity=0.418 Sum_probs=41.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCcEEEEecCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t--------------------------~~l~~~l~~ADIVIsa~g~ 189 (272)
+||.|||+|. ||..+|..|+.+|. +|++++... .++ +.+++||+||.+.|.
T Consensus 2 ~KV~VIGaG~-vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~-~~~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGF-VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNY-ADTANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCH-HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCH-HHhCCCCEEEEcCCC
Confidence 4799999977 59999999999874 888887531 233 347999999999996
Q ss_pred Cc
Q 024103 190 AN 191 (272)
Q Consensus 190 p~ 191 (272)
|.
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 53
No 351
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.06 E-value=0.034 Score=48.67 Aligned_cols=37 Identities=32% Similarity=0.422 Sum_probs=33.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++|+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~ 38 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLND 38 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5789999999988899999999999999999887753
No 352
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=95.05 E-value=0.035 Score=49.73 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=42.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------CHhhhcCCC--cEEEEecCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------NPEQITSEA--DIVIAAAGV 189 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~------~l~~~l~~A--DIVIsa~g~ 189 (272)
+++|+|++|.+|+.++..|.++|.+|+++.|..- ++.+.++.+ |+||...+.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 5899999888999999999999999999887642 244556655 999987764
No 353
>PRK09414 glutamate dehydrogenase; Provisional
Probab=95.05 E-value=0.052 Score=53.19 Aligned_cols=51 Identities=27% Similarity=0.223 Sum_probs=42.8
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024103 115 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (272)
Q Consensus 115 ~~p~Ta~g~~~~----l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~ 166 (272)
-.+.|++|+... +++.+.+++|++|+|.|.|+ ||+.++..|.+.|++|+.+
T Consensus 207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGn-VG~~~A~~L~~~GakVVav 261 (445)
T PRK09414 207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGN-VAIYAIEKAQQLGAKVVTC 261 (445)
T ss_pred CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 347888886555 45568899999999999988 5999999999999987766
No 354
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.05 E-value=0.024 Score=50.77 Aligned_cols=39 Identities=28% Similarity=0.368 Sum_probs=34.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.++++|+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~ 44 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQ 44 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999988889999999999999999988753
No 355
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.05 E-value=0.058 Score=53.21 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=32.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+.+|++.|+|.|+. |++++.+|.++|+.|+.++...
T Consensus 5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~~ 40 (498)
T PRK02006 5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTRE 40 (498)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCCC
Confidence 57899999999997 9999999999999999998643
No 356
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.04 E-value=0.033 Score=49.51 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=33.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
.+++||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3578999999999888999999999999999988754
No 357
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.032 Score=49.88 Aligned_cols=37 Identities=27% Similarity=0.413 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++++|+++|.|+++-+|+.++..|+.+|++|+++.|+
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998889999999999999999999875
No 358
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.03 E-value=0.06 Score=52.20 Aligned_cols=124 Identities=18% Similarity=0.204 Sum_probs=67.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC-HhhhcCC--CcEEEEecCCCccccCCCc-CCCcEEEEeee
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-PEQITSE--ADIVIAAAGVANLVRGSWL-KPGAVVLDVGT 209 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~-l~~~l~~--ADIVIsa~g~p~~i~~~~v-k~g~vviDig~ 209 (272)
+.+|+++|+|.|++ |++++..|+++|+.|++.+..... ..+.++. .-+-+. .|.. +...+ ....+|+--|+
T Consensus 3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~-~g~~---~~~~~~~~d~vv~spgi 77 (445)
T PRK04308 3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFY-TGRL---KDALDNGFDILALSPGI 77 (445)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEE-eCCC---CHHHHhCCCEEEECCCC
Confidence 57899999999997 999999999999999998764321 1111211 011110 1110 00011 12345555555
Q ss_pred CCCCCCCCCCCCCCceEecccchhh-hhh----hceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 210 CPVDVSVDPSCEYGYRLMGDVCYEE-AMR----LASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 210 ~~~~~~~~~~~~~~~k~~Gdvd~~~-~~~----~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
++.....-.....+-.+.++.++-. +.+ +..+ |-|--|.=|+..|+.++++..
T Consensus 78 ~~~~p~~~~a~~~~i~v~~~~~~~~~~~~~~~~~~I~---ITGT~GKTTTt~li~~iL~~~ 135 (445)
T PRK04308 78 SERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIA---ITGSNGKTTVTSLVGYLCIKC 135 (445)
T ss_pred CCCCHHHHHHHHcCCcEEEhHHHHHHhhhcCCCCEEE---EECCCcHHHHHHHHHHHHHHc
Confidence 5431000000001235666666522 111 2233 557788999999999888653
No 359
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=95.00 E-value=0.033 Score=55.36 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=29.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++|.|||+|-+ |.++|..|+..|..|++.+++
T Consensus 6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 67999999876 999999999999999999876
No 360
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.00 E-value=0.038 Score=48.95 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc
Confidence 5789999999999889999999999999999888654
No 361
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.99 E-value=0.034 Score=48.28 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=34.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++.+|..+++.|.++|++|++..|+.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~ 39 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE 39 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36799999999999899999999999999999888764
No 362
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.98 E-value=0.027 Score=49.75 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=33.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+.+|+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~ 40 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP 40 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCH
Confidence 6789999999988899999999999999999887653
No 363
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=94.96 E-value=0.058 Score=50.57 Aligned_cols=95 Identities=21% Similarity=0.242 Sum_probs=59.4
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHh--
Q 024103 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE-- 174 (272)
Q Consensus 116 ~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------------~~l~-- 174 (272)
+|++..-.+.+|....---.|.+|+|.|+++.||..+.+++...|+++.+.-++. .++.
T Consensus 123 l~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~ 202 (326)
T COG0604 123 LPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQ 202 (326)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHH
Confidence 3555555666666532222399999999888899999999999996533333221 1122
Q ss_pred --hhc--CCCcEEEEecCCCccc-cCCCcCCCcEEEEeeeC
Q 024103 175 --QIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 175 --~~l--~~ADIVIsa~g~p~~i-~~~~vk~g~vviDig~~ 210 (272)
+.+ +..|+|+..+|.+.+- .-..++++-.++.+|..
T Consensus 203 v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~ 243 (326)
T COG0604 203 VRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL 243 (326)
T ss_pred HHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecC
Confidence 233 2578888888866542 23345555566666654
No 364
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=94.95 E-value=0.04 Score=56.90 Aligned_cols=73 Identities=27% Similarity=0.322 Sum_probs=55.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCC----------------CCHhhhcCCCcEEEEecCCCc---ccc-
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR- 194 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~g--a~V~v~~~~t----------------~~l~~~l~~ADIVIsa~g~p~---~i~- 194 (272)
++|.|||.|.+ |.+++..|.+.| .+|++++++. .++.+.+.++|+||.+++... .+.
T Consensus 4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~ 82 (735)
T PRK14806 4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLAD 82 (735)
T ss_pred cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 68999999885 999999999988 4788888753 234556789999999998432 121
Q ss_pred -CCCcCCCcEEEEeeeC
Q 024103 195 -GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 195 -~~~vk~g~vviDig~~ 210 (272)
...++++.+|+|++..
T Consensus 83 l~~~~~~~~ii~d~~sv 99 (735)
T PRK14806 83 LKPLLSEHAIVTDVGST 99 (735)
T ss_pred HHHhcCCCcEEEEcCCC
Confidence 1245778899999864
No 365
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=94.95 E-value=0.046 Score=47.36 Aligned_cols=79 Identities=23% Similarity=0.373 Sum_probs=47.8
Q ss_pred CccceEEEEc----------------CCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhhhc
Q 024103 134 IMGKNAVVIG----------------RSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQIT 177 (272)
Q Consensus 134 l~gk~v~ViG----------------~g~~vG~~la~~L~~~ga~V~v~~~~t~--------------------~l~~~l 177 (272)
|+||+|+|-+ .||-.|..+|..+..+||+|++++.... .+.+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL 80 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence 4688888875 3344699999999999999999987631 224667
Q ss_pred CCCcEEEEecCCCccc----cCCCcCC---CcEEEEeeeCCC
Q 024103 178 SEADIVIAAAGVANLV----RGSWLKP---GAVVLDVGTCPV 212 (272)
Q Consensus 178 ~~ADIVIsa~g~p~~i----~~~~vk~---g~vviDig~~~~ 212 (272)
+++|++|.+.-...+- ...-+++ ....+.+--+|+
T Consensus 81 ~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~pk 122 (185)
T PF04127_consen 81 PSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTPK 122 (185)
T ss_dssp GGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-GG
T ss_pred CcceeEEEecchhheeehhccccccccccCcceEEEEEeChH
Confidence 8899999777665542 2344653 356777776664
No 366
>PLN02427 UDP-apiose/xylose synthase
Probab=94.92 E-value=0.056 Score=51.15 Aligned_cols=58 Identities=21% Similarity=0.221 Sum_probs=45.0
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCCC----------------------------CHhhhcCCCc
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK----------------------------NPEQITSEAD 181 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~-ga~V~v~~~~t~----------------------------~l~~~l~~AD 181 (272)
+..++.++|+|.|+.|.+|+.++..|+++ |.+|+.+.+... .+.+.++.+|
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 45677789999999999999999999998 488888875321 1245567789
Q ss_pred EEEEecC
Q 024103 182 IVIAAAG 188 (272)
Q Consensus 182 IVIsa~g 188 (272)
+||...+
T Consensus 89 ~ViHlAa 95 (386)
T PLN02427 89 LTINLAA 95 (386)
T ss_pred EEEEccc
Confidence 9997665
No 367
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.90 E-value=0.048 Score=50.86 Aligned_cols=59 Identities=20% Similarity=0.111 Sum_probs=45.3
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------------CHhhhcCCCcEEE
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------NPEQITSEADIVI 184 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~--------------------------~l~~~l~~ADIVI 184 (272)
+.+-.+++++|.|++|.+|+.++..|+++|.+|+++.+... .+.+.++..|.||
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 34557899999999998999999999999999988765321 1234456789999
Q ss_pred EecCC
Q 024103 185 AAAGV 189 (272)
Q Consensus 185 sa~g~ 189 (272)
...+.
T Consensus 85 h~A~~ 89 (353)
T PLN02896 85 HVAAS 89 (353)
T ss_pred ECCcc
Confidence 77664
No 368
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=94.89 E-value=0.047 Score=51.65 Aligned_cols=76 Identities=24% Similarity=0.302 Sum_probs=52.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC-CCEEE-EEeCCC---C--------------------CHhhhcCCCcEEEEecCCCc
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRH-HATVS-IVHALT---K--------------------NPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~-ga~V~-v~~~~t---~--------------------~l~~~l~~ADIVIsa~g~p~ 191 (272)
.+|.|+|++|.+|+-++..|.++ +.++. ++.++. + +..+.+.++|+||.|++...
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~~ 80 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHGV 80 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCchH
Confidence 37999999888999999999877 46766 544321 1 11233458999999997432
Q ss_pred --cccCCCcCCCcEEEEeeeCCC
Q 024103 192 --LVRGSWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 192 --~i~~~~vk~g~vviDig~~~~ 212 (272)
-+-+...+.|..|||++....
T Consensus 81 s~~~~~~~~~~G~~VIDlS~~fR 103 (346)
T TIGR01850 81 SAELAPELLAAGVKVIDLSADFR 103 (346)
T ss_pred HHHHHHHHHhCCCEEEeCChhhh
Confidence 133334567899999987643
No 369
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.88 E-value=0.046 Score=48.44 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||+++|.|+++-+|+.++..|.++|+.|.++.++
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999998887664
No 370
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.88 E-value=0.034 Score=50.66 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=28.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++|.|||.|.+ |.+++..|+..|.+|++++++
T Consensus 4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~~ 35 (282)
T PRK05808 4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDIS 35 (282)
T ss_pred cEEEEEccCHH-HHHHHHHHHHCCCceEEEeCC
Confidence 57999999885 999999999999999999743
No 371
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.049 Score=48.15 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=34.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||.++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999998899999999999999999988753
No 372
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.87 E-value=0.033 Score=52.90 Aligned_cols=70 Identities=23% Similarity=0.317 Sum_probs=47.7
Q ss_pred EEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC-------------------------CCHhhhcCCCcEEEEecCCCc
Q 024103 139 AVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 139 v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t-------------------------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
|+|+|+| .+|+.++..|.+++- +|+++.|+. .+|.+.++++|+||+++|...
T Consensus 1 IlvlG~G-~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGAG-RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE--S-HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcCc-HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 6899995 469999999998873 799998762 135678999999999998541
Q ss_pred -c-ccCCCcCCCcEEEEeee
Q 024103 192 -L-VRGSWLKPGAVVLDVGT 209 (272)
Q Consensus 192 -~-i~~~~vk~g~vviDig~ 209 (272)
. +-...++.|.-.+|..+
T Consensus 80 ~~~v~~~~i~~g~~yvD~~~ 99 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDTSY 99 (386)
T ss_dssp HHHHHHHHHHHT-EEEESS-
T ss_pred hHHHHHHHHHhCCCeeccch
Confidence 1 22234566778888554
No 373
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=94.86 E-value=0.14 Score=44.59 Aligned_cols=94 Identities=28% Similarity=0.362 Sum_probs=62.6
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CHhhh-
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQI- 176 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------------~l~~~- 176 (272)
|+....++..+.....-..|.+++|.|.|. +|..+++++...|++|+.+.++.. +..+.
T Consensus 116 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 194 (271)
T cd05188 116 PEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEEL 194 (271)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHH
Confidence 333344455555554445799999999999 799999999999999888765421 11111
Q ss_pred ----cCCCcEEEEecCCCccc--cCCCcCCCcEEEEeeeCC
Q 024103 177 ----TSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 177 ----l~~ADIVIsa~g~p~~i--~~~~vk~g~vviDig~~~ 211 (272)
-+..|++|.++|.+..+ -.+.++++..+++++...
T Consensus 195 ~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 195 RLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred HHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 24579999888863322 224566777788887554
No 374
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.85 E-value=0.054 Score=51.87 Aligned_cols=40 Identities=20% Similarity=0.137 Sum_probs=35.1
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+...++++++|+|++|.+|+.++..|.++|.+|+++.|..
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~ 94 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREK 94 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEech
Confidence 4567899999999999999999999999999998887653
No 375
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.85 E-value=0.048 Score=47.12 Aligned_cols=38 Identities=32% Similarity=0.368 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++.+|+++|.|+++-+|+.++..|+++|.+|+++.|+.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~ 39 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNE 39 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35689999999998899999999999999999998764
No 376
>PRK07326 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.03 Score=48.54 Aligned_cols=37 Identities=24% Similarity=0.273 Sum_probs=33.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+.+++++|+|+++-+|+.+++.|+++|++|.++.|+.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~ 40 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQ 40 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCH
Confidence 4689999999988899999999999999999998753
No 377
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.84 E-value=0.04 Score=48.01 Aligned_cols=38 Identities=21% Similarity=0.411 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++++++|.|+++.+|+.++..|+++|++|.+++|+.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~ 41 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE 41 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999998899999999999999999998764
No 378
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.84 E-value=0.078 Score=46.32 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=31.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
++++++++|.|+++-+|+.++..|+++|++|++..+
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~ 38 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK 38 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 357899999999998999999999999999876543
No 379
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.84 E-value=0.064 Score=45.77 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=26.9
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
+|+|+|.|+. |..++..|.+.|. ++++++..
T Consensus 1 ~VlViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 32 (174)
T cd01487 1 KVGIAGAGGL-GSNIAVLLARSGVGNLKLVDFD 32 (174)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 5899999995 9999999999997 69998744
No 380
>PRK09291 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.048 Score=47.91 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=30.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6789999999889999999999999999888764
No 381
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=94.82 E-value=0.041 Score=54.74 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=29.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++|.|||+|-+ |.++|..|+..|..|++.+++
T Consensus 8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~ 39 (507)
T PRK08268 8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDAR 39 (507)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 68999999875 999999999999999999865
No 382
>PRK06139 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.025 Score=52.92 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=34.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++|+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~ 41 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDE 41 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46899999999988889999999999999999998764
No 383
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.80 E-value=0.079 Score=49.75 Aligned_cols=54 Identities=13% Similarity=0.324 Sum_probs=41.2
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC-C------EEEEEeCCC--------------------------CCHhhhcCCCcEEE
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHH-A------TVSIVHALT--------------------------KNPEQITSEADIVI 184 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~g-a------~V~v~~~~t--------------------------~~l~~~l~~ADIVI 184 (272)
||+|+|++|.||..++..|...+ + ++.+.+... .+..+.+++||+||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 79999995557999999998766 2 266666542 23458899999999
Q ss_pred EecCCCc
Q 024103 185 AAAGVAN 191 (272)
Q Consensus 185 sa~g~p~ 191 (272)
.+.|.|.
T Consensus 82 itAG~~~ 88 (323)
T cd00704 82 LVGAFPR 88 (323)
T ss_pred EeCCCCC
Confidence 9999653
No 384
>PRK14030 glutamate dehydrogenase; Provisional
Probab=94.78 E-value=0.082 Score=51.79 Aligned_cols=50 Identities=24% Similarity=0.294 Sum_probs=42.3
Q ss_pred ccCCHHHHHH----HHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024103 116 IPCTPKGCIE----LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (272)
Q Consensus 116 ~p~Ta~g~~~----~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~ 166 (272)
.++|++|++. ++++.+.+++|++|+|=|.|. ||..++..|.+.|++|+.+
T Consensus 204 ~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGn-VG~~aA~~L~e~GakvVav 257 (445)
T PRK14030 204 PEATGFGALYFVHQMLETKGIDIKGKTVAISGFGN-VAWGAATKATELGAKVVTI 257 (445)
T ss_pred CCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 4679998654 455678899999999999988 5999999999999987774
No 385
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=94.76 E-value=0.13 Score=46.62 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=59.7
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CH----
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NP---- 173 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------------~l---- 173 (272)
++.+..++..++... --.|.+++|.|+++.+|..+++++..+|++|+++.++.+ ++
T Consensus 122 ~~~~~ta~~~~~~~~-~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 200 (324)
T cd08292 122 IAMPLSALMLLDFLG-VKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKV 200 (324)
T ss_pred cccHHHHHHHHHhhC-CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHH
Confidence 343444444454322 236899999999887899999999999998777644321 11
Q ss_pred hhhc--CCCcEEEEecCCCccc-cCCCcCCCcEEEEeeeC
Q 024103 174 EQIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 174 ~~~l--~~ADIVIsa~g~p~~i-~~~~vk~g~vviDig~~ 210 (272)
.+.. +..|+|+.++|.+..- --..++++..++.+|..
T Consensus 201 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 201 REAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred HHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecC
Confidence 1122 2489999888865321 12345677778888753
No 386
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.74 E-value=0.031 Score=49.90 Aligned_cols=37 Identities=22% Similarity=0.154 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++++|+++|.|+++.+|+.++..|.++|++|+++.|+
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4689999999998888999999999999999988765
No 387
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.73 E-value=0.033 Score=48.59 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=32.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++|++++|.|+++.+|+.++..|.++|++|+++.|+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~ 39 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQ 39 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6899999999977789999999999999998887753
No 388
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.72 E-value=0.04 Score=48.02 Aligned_cols=37 Identities=30% Similarity=0.366 Sum_probs=32.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++|+++|.|+++.+|+.++..|.++|++|.++.|+
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 3679999999998888999999999999998888765
No 389
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.71 E-value=0.041 Score=50.27 Aligned_cols=40 Identities=33% Similarity=0.373 Sum_probs=36.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK 171 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~ 171 (272)
..++||.++|-|++.-+|+++|..|++.||+|+++.|+.+
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEE 43 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4589999999999888899999999999999999998753
No 390
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=94.70 E-value=0.058 Score=50.74 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=47.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhcCCCcEEEEecCCCcc---c-c--CCCcCCCcE
Q 024103 149 GLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGVANL---V-R--GSWLKPGAV 203 (272)
Q Consensus 149 G~~la~~L~~~ga~V~v~~~~t-------------------~~l~~~l~~ADIVIsa~g~p~~---i-~--~~~vk~g~v 203 (272)
|+++|..|++.|.+|++.+++. .+..+.++++|+||+.++.+.- + . .+.+++|++
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~GaI 111 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENAV 111 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCCE
Confidence 7788888888888888886542 2456888999999999996652 2 2 235688999
Q ss_pred EEEeeeCC
Q 024103 204 VLDVGTCP 211 (272)
Q Consensus 204 viDig~~~ 211 (272)
|||.++..
T Consensus 112 VID~STIs 119 (341)
T TIGR01724 112 ICNTCTVS 119 (341)
T ss_pred EEECCCCC
Confidence 99998653
No 391
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.70 E-value=0.055 Score=47.76 Aligned_cols=37 Identities=27% Similarity=0.292 Sum_probs=33.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999998889999999999999999998875
No 392
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=94.69 E-value=0.086 Score=49.05 Aligned_cols=58 Identities=17% Similarity=0.241 Sum_probs=50.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCcEEEEecCCCc
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
+-..+++--||-|.+ |.+++..|.+.|.+|+|.+|+. ....|..+++|+||+.++.|.
T Consensus 32 ~~s~~~iGFIGLG~M-G~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~ 103 (327)
T KOG0409|consen 32 TPSKTRIGFIGLGNM-GSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPK 103 (327)
T ss_pred CcccceeeEEeeccc-hHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChH
Confidence 335788999999887 9999999999999999999874 345788999999999999765
No 393
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=94.69 E-value=0.06 Score=50.99 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=42.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------C------HhhhcCCCcEEEEecC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------N------PEQITSEADIVIAAAG 188 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~---------------~------l~~~l~~ADIVIsa~g 188 (272)
++|+|+|.|+.|.+|+.++..|.++|.+|+.+.|... + +.+.++.+|+||...+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 6899999999898999999999999999998875321 1 1234567899997665
No 394
>PRK12743 oxidoreductase; Provisional
Probab=94.68 E-value=0.081 Score=46.78 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=30.2
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
+|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~ 34 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWH 34 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 689999999999999999999999999988754
No 395
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.67 E-value=0.042 Score=47.72 Aligned_cols=38 Identities=34% Similarity=0.429 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE-eCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV-HALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~-~~~t 170 (272)
++.+|+++|+|+++.+|+.++..|+++|++|++. .|+.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~ 40 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE 40 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4678999999998888999999999999999888 6654
No 396
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.67 E-value=0.053 Score=42.99 Aligned_cols=74 Identities=22% Similarity=0.210 Sum_probs=47.5
Q ss_pred eEEEEcCCcccHHHHHHHHHhC-CCEEEEE-eCCC---CC-------H--------h-hhc--CCCcEEEEecCCCcc--
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRH-HATVSIV-HALT---KN-------P--------E-QIT--SEADIVIAAAGVANL-- 192 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~-ga~V~v~-~~~t---~~-------l--------~-~~l--~~ADIVIsa~g~p~~-- 192 (272)
++.|+|+++.+|+.++..|... +.+++.+ .++. +. + . +.+ .++|+||.+++....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~ 80 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKE 80 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHHH
Confidence 4789997776799888888874 6665555 3221 00 0 0 112 478999999985421
Q ss_pred -cc--CCCcCCCcEEEEeeeCC
Q 024103 193 -VR--GSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 193 -i~--~~~vk~g~vviDig~~~ 211 (272)
+. ....++|.++||++...
T Consensus 81 ~~~~~~~~~~~g~~viD~s~~~ 102 (122)
T smart00859 81 IAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred HHHHHHhhhcCCCEEEECCccc
Confidence 11 22357899999999664
No 397
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.65 E-value=0.074 Score=48.57 Aligned_cols=52 Identities=12% Similarity=0.104 Sum_probs=40.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC----CEEEEEeCCC-----------------CCHhhhcCCCcEEEEecCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT-----------------KNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~g----a~V~v~~~~t-----------------~~l~~~l~~ADIVIsa~g~ 189 (272)
.++.|||.|.+ |.+++..|.+.| .+|.+++++. .+..+.++++|+||.+++.
T Consensus 2 ~~I~iIG~G~m-G~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp 74 (277)
T PRK06928 2 EKIGFIGYGSM-ADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPP 74 (277)
T ss_pred CEEEEECccHH-HHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCH
Confidence 36899999885 999999999887 5788877642 2334557889999999874
No 398
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=94.64 E-value=0.048 Score=46.28 Aligned_cols=37 Identities=24% Similarity=0.406 Sum_probs=31.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+|+|||.|.. +--++..|++.|.+|+++.|+.
T Consensus 164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~~ 200 (203)
T PF13738_consen 164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRSP 200 (203)
T ss_dssp GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS-
T ss_pred hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecCC
Confidence 578999999999998 9999999999999999999864
No 399
>PLN02214 cinnamoyl-CoA reductase
Probab=94.64 E-value=0.083 Score=49.34 Aligned_cols=36 Identities=19% Similarity=0.070 Sum_probs=31.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++|+|+|.|++|.+|+.++..|+++|..|+.+.|.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 43 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRN 43 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 578999999998889999999999999998877653
No 400
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.62 E-value=0.06 Score=47.96 Aligned_cols=37 Identities=14% Similarity=0.258 Sum_probs=32.3
Q ss_pred CCCccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeCC
Q 024103 132 VEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 132 ~~l~gk~v~ViG~g---~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++||.++|.|++ + +|++++..|+++|++|.++.|+
T Consensus 6 ~~~~~k~~lItGas~g~G-IG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQS-IAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred cccCCCEEEEECCCCCCc-HHHHHHHHHHHcCCEEEEEeCC
Confidence 35789999999986 5 5999999999999999988765
No 401
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.61 E-value=0.063 Score=46.42 Aligned_cols=38 Identities=32% Similarity=0.288 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++++|+++|.|+++.+|+.++..|+++|++|++..++.
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~ 39 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASS 39 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 56889999999999999999999999999997776543
No 402
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.61 E-value=0.09 Score=49.47 Aligned_cols=36 Identities=28% Similarity=0.168 Sum_probs=33.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+++|+|-|++|.+|.-++..|+.+|.+|.-.-|+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~ 40 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDP 40 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 689999999999999999999999999998887764
No 403
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=94.60 E-value=0.058 Score=51.12 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=52.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC---------------CCH-hhhcCCCcEEEEecCCCcc--c
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNP-EQITSEADIVIAAAGVANL--V 193 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga---~V~v~~~~t---------------~~l-~~~l~~ADIVIsa~g~p~~--i 193 (272)
...+|.|+|++|.+|+-+..+|.+++. ++..+.+.. .++ .+.+.++|+||.|+|.... +
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~~~ 85 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISKKF 85 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHHHH
Confidence 457899999999999999999998653 443332221 011 1345789999999975321 2
Q ss_pred cCCCcCCCcEEEEeeeCC
Q 024103 194 RGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 194 ~~~~vk~g~vviDig~~~ 211 (272)
-++..+.|+.|||.+..+
T Consensus 86 ~~~~~~~g~~VIDlS~~f 103 (344)
T PLN02383 86 GPIAVDKGAVVVDNSSAF 103 (344)
T ss_pred HHHHHhCCCEEEECCchh
Confidence 223346799999998664
No 404
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=94.58 E-value=0.081 Score=48.72 Aligned_cols=92 Identities=26% Similarity=0.291 Sum_probs=60.5
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCCC-------------------C---H
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTK-------------------N---P 173 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~-V~v~~~~t~-------------------~---l 173 (272)
+|.....+..++..++ ..|.+|+|.|.|. +|..+++++...|++ |+++.++.. + +
T Consensus 146 ~~~~~ta~~~l~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 223 (339)
T cd08239 146 LCGIGTAYHALRRVGV-SGRDTVLVVGAGP-VGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEI 223 (339)
T ss_pred cchHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHH
Confidence 4443444555555443 3599999999865 699999999999998 887754321 1 1
Q ss_pred hhhcC--CCcEEEEecCCCcccc--CCCcCCCcEEEEeeeC
Q 024103 174 EQITS--EADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 174 ~~~l~--~ADIVIsa~g~p~~i~--~~~vk~g~vviDig~~ 210 (272)
.+... .+|+||.++|.+..+. -+.++++..++-+|..
T Consensus 224 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 264 (339)
T cd08239 224 RELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEG 264 (339)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence 12222 4799999998765432 2456777677777754
No 405
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=94.56 E-value=0.064 Score=50.17 Aligned_cols=76 Identities=13% Similarity=0.125 Sum_probs=52.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC----CCHhhhcCCCcEEEEecCCCc--cccCCCcCCCcEEEEeee
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT----KNPEQITSEADIVIAAAGVAN--LVRGSWLKPGAVVLDVGT 209 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t----~~l~~~l~~ADIVIsa~g~p~--~i~~~~vk~g~vviDig~ 209 (272)
-+|.|+|++|..|.-+.++|.++- .++.-..+.. .+..+.+.++|++|.|++..- -+-+...+.|+.|||...
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~~~~~~~~~~~~~D~vFlalp~~~s~~~~~~~~~~g~~VIDlSa 81 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAVSLVDNPNTCIIDAST 81 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccccCcCCHhHhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 379999999999999999998875 4544443332 234556688999999987421 121223356899999986
Q ss_pred CCC
Q 024103 210 CPV 212 (272)
Q Consensus 210 ~~~ 212 (272)
...
T Consensus 82 dfR 84 (310)
T TIGR01851 82 AYR 84 (310)
T ss_pred HHh
Confidence 653
No 406
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.55 E-value=0.057 Score=50.69 Aligned_cols=64 Identities=20% Similarity=0.288 Sum_probs=51.4
Q ss_pred HHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcC--CCcEEEEec
Q 024103 122 GCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITS--EADIVIAAA 187 (272)
Q Consensus 122 g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l~~~l~--~ADIVIsa~ 187 (272)
.+...|++++.. .|+++.|+|.|| +|.-..++...+|..|+++.+..+..+++++ -||..|.++
T Consensus 169 TvYspLk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~ 234 (360)
T KOG0023|consen 169 TVYSPLKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDST 234 (360)
T ss_pred EEeehhHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEec
Confidence 356678999988 999999999999 6999999999999999999887655555555 356655544
No 407
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.54 E-value=0.033 Score=50.90 Aligned_cols=37 Identities=27% Similarity=0.284 Sum_probs=33.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999888764
No 408
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=94.54 E-value=0.062 Score=54.22 Aligned_cols=37 Identities=22% Similarity=0.005 Sum_probs=32.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+||.++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ 114 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSA 114 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4789999999988889999999999999999887653
No 409
>PLN02253 xanthoxin dehydrogenase
Probab=94.53 E-value=0.042 Score=49.24 Aligned_cols=37 Identities=32% Similarity=0.472 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999999889999999999999999988764
No 410
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.53 E-value=0.056 Score=48.75 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=31.3
Q ss_pred CccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g---~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++||.++|.|+| + +|++++..|+++|++|.++.|+
T Consensus 5 l~~k~~lVTGas~~~G-IG~aiA~~la~~Ga~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHS-IAWGIAKQLAAQGAELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCc-HHHHHHHHHHhCCCEEEEecCc
Confidence 689999999998 5 5999999999999999988654
No 411
>PRK12742 oxidoreductase; Provisional
Probab=94.51 E-value=0.069 Score=46.27 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=31.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
.++||+++|.|+++-+|+.++..|+++|++|.+..+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 367999999999888899999999999999877644
No 412
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=94.50 E-value=0.075 Score=50.33 Aligned_cols=69 Identities=16% Similarity=0.224 Sum_probs=50.9
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC--------CEEEEEeC-----C----------------------------CCCHhhh
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHH--------ATVSIVHA-----L----------------------------TKNPEQI 176 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~g--------a~V~v~~~-----~----------------------------t~~l~~~ 176 (272)
+|.|||+|.- |.++|..|...| .+|++..| . +.++++.
T Consensus 1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 5899999885 999999999988 78888865 1 1356788
Q ss_pred cCCCcEEEEecCCCc---ccc--CCCcCCCcEEEEe
Q 024103 177 TSEADIVIAAAGVAN---LVR--GSWLKPGAVVLDV 207 (272)
Q Consensus 177 l~~ADIVIsa~g~p~---~i~--~~~vk~g~vviDi 207 (272)
+++||+||-|++.-. ++. ..+++++..+|-+
T Consensus 80 l~~ADiIIlAVPs~~i~~vl~~l~~~l~~~~~iVs~ 115 (342)
T TIGR03376 80 AKGADILVFVIPHQFLEGICKQLKGHVKPNARAISC 115 (342)
T ss_pred HhcCCEEEEECChHHHHHHHHHHHhhcCCCCEEEEE
Confidence 999999999998532 111 2345666666655
No 413
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.50 E-value=0.074 Score=49.31 Aligned_cols=59 Identities=17% Similarity=0.271 Sum_probs=47.0
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------------CCHhhhc
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------KNPEQIT 177 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t---------------------------------~~l~~~l 177 (272)
-.+++|+.|+|-|+|.-+||.+|..++++|+++.+.+.+. +.+++..
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999876665331 1234566
Q ss_pred CCCcEEEEecCC
Q 024103 178 SEADIVIAAAGV 189 (272)
Q Consensus 178 ~~ADIVIsa~g~ 189 (272)
.+-||+|+..|.
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 788999988883
No 414
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=94.49 E-value=0.048 Score=51.54 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=54.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC---CCEEEEEeCCC---------------CCHhhh-cCCCcEEEEecCCCc--cc
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRH---HATVSIVHALT---------------KNPEQI-TSEADIVIAAAGVAN--LV 193 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~---ga~V~v~~~~t---------------~~l~~~-l~~ADIVIsa~g~p~--~i 193 (272)
++.+|.|||++|.+|+-+..+|.++ ..++....+.. +++.+. ..++|+|+.|+|..- -+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~~~s~~~ 82 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGREASAAY 82 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCHHHHHHH
Confidence 5678999999999999999999984 24666655431 122222 267899999997431 13
Q ss_pred cCCCcCCCcEEEEeeeCCC
Q 024103 194 RGSWLKPGAVVLDVGTCPV 212 (272)
Q Consensus 194 ~~~~vk~g~vviDig~~~~ 212 (272)
-++..+.|+.|||.+..+.
T Consensus 83 ~~~~~~~g~~VIDlS~~fR 101 (336)
T PRK08040 83 AEEATNAGCLVIDSSGLFA 101 (336)
T ss_pred HHHHHHCCCEEEECChHhc
Confidence 3344567999999986653
No 415
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=94.49 E-value=0.055 Score=51.18 Aligned_cols=85 Identities=21% Similarity=0.237 Sum_probs=58.8
Q ss_pred HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH--------------------hhhcCCCcEE
Q 024103 124 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------------------EQITSEADIV 183 (272)
Q Consensus 124 ~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l--------------------~~~l~~ADIV 183 (272)
.+.|++.+. -.|++|+|+|.|+. |.-+++++..+||+|+.+.+..+.+ +..-+.+|++
T Consensus 156 y~alk~~~~-~pG~~V~I~G~GGl-Gh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~i 233 (339)
T COG1064 156 YRALKKANV-KPGKWVAVVGAGGL-GHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAI 233 (339)
T ss_pred eeehhhcCC-CCCCEEEEECCcHH-HHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEE
Confidence 344554322 25999999999985 9999999988999999998764211 1222238888
Q ss_pred EEecCCCcccc--CCCcCCCcEEEEeeeCC
Q 024103 184 IAAAGVANLVR--GSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 184 Isa~g~p~~i~--~~~vk~g~vviDig~~~ 211 (272)
|++++ +..+. -+.++++-.++=+|..+
T Consensus 234 i~tv~-~~~~~~~l~~l~~~G~~v~vG~~~ 262 (339)
T COG1064 234 IDTVG-PATLEPSLKALRRGGTLVLVGLPG 262 (339)
T ss_pred EECCC-hhhHHHHHHHHhcCCEEEEECCCC
Confidence 88888 55443 34577776677778774
No 416
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.45 E-value=0.35 Score=48.60 Aligned_cols=115 Identities=18% Similarity=0.274 Sum_probs=75.8
Q ss_pred HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCcccccccccccc
Q 024103 29 KIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAM 108 (272)
Q Consensus 29 ~~~~~~~~Gi~~~~~~l~~~~~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~~~n~g~l~~ 108 (272)
.....++.+++-..+..| ..+++++.+.++.++.. |+.|.. +|. ...+.+.....++|+- -.|.
T Consensus 169 i~~~v~~~~~~~iiiAip-s~~~~~~~~i~~~l~~~----~~~v~~-lP~---~~~l~~~~~~lreI~i------eDLL- 232 (588)
T COG1086 169 IERVVEELGIQLILIAIP-SASQEERRRILLRLART----GIAVRI-LPQ---LTDLKDLNGQLREIEI------EDLL- 232 (588)
T ss_pred HHHHHHHcCCceEEEecC-CCCHHHHHHHHHHHHhc----CCcEEe-cCc---HHHHHHhccccccCCH------HHHh-
Confidence 567788899998888877 56889999999999985 333322 332 3445553333444332 1122
Q ss_pred CCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024103 109 RGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (272)
Q Consensus 109 ~~~~~~~~p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~ 169 (272)
| ++. ++.+...+.. .+.||+|+|-|+||.+|..++..+++.+. ++.+..+.
T Consensus 233 g--R~p-V~~d~~~i~~-------~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~ 284 (588)
T COG1086 233 G--RPP-VALDTELIGA-------MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRD 284 (588)
T ss_pred C--CCC-CCCCHHHHHh-------HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCc
Confidence 3 222 2333233332 26899999999999999999999999995 77777665
No 417
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.45 E-value=0.057 Score=51.93 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=30.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~ 168 (272)
|+.++|+|+|.|+. |-.++.+|+..|. ++++++.
T Consensus 40 L~~~~VlviG~GGl-Gs~va~~La~~Gvg~i~lvD~ 74 (392)
T PRK07878 40 LKNARVLVIGAGGL-GSPTLLYLAAAGVGTLGIVEF 74 (392)
T ss_pred HhcCCEEEECCCHH-HHHHHHHHHHcCCCeEEEECC
Confidence 57899999999995 9999999999996 8888863
No 418
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.45 E-value=0.065 Score=46.76 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=32.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++|+++|.|+++.+|+.++..|+++|++|.+..++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 578999999998889999999999999999888664
No 419
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=94.44 E-value=0.077 Score=48.18 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=41.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCcEEEEecC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAG 188 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~---------------------~l~~~l~~ADIVIsa~g 188 (272)
++++|.|++|.+|+.++..|.++|.+|+++.|+.. ++.+.++.+|+||...+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 47999999888999999999999999998876531 23455667899886665
No 420
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.41 E-value=0.053 Score=47.80 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~-V~v~~~~t 170 (272)
.+++|+++|.|+++.+|+.++..|.++|++ |+++.|+.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~ 41 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNA 41 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCH
Confidence 368999999999888999999999999998 88887754
No 421
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.40 E-value=0.063 Score=48.01 Aligned_cols=36 Identities=31% Similarity=0.204 Sum_probs=32.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++|.++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~ 37 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNP 37 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCH
Confidence 578999999988899999999999999998887653
No 422
>PRK05086 malate dehydrogenase; Provisional
Probab=94.39 E-value=0.11 Score=48.41 Aligned_cols=55 Identities=27% Similarity=0.432 Sum_probs=39.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHh-CC--CEEEEEeCC-----------------------CCCHhhhcCCCcEEEEecCCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQR-HH--ATVSIVHAL-----------------------TKNPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~-~g--a~V~v~~~~-----------------------t~~l~~~l~~ADIVIsa~g~p 190 (272)
+|++|||++|.+|..++..|.. .+ ..++++.+. ..++.+.++++|+||.+.|.|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 5899999955579999988754 33 356666531 124467789999999999975
Q ss_pred c
Q 024103 191 N 191 (272)
Q Consensus 191 ~ 191 (272)
+
T Consensus 81 ~ 81 (312)
T PRK05086 81 R 81 (312)
T ss_pred C
Confidence 4
No 423
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.069 Score=47.97 Aligned_cols=38 Identities=26% Similarity=0.379 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTA 40 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 46899999999999899999999999999999887753
No 424
>PRK07806 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.076 Score=46.42 Aligned_cols=36 Identities=31% Similarity=0.333 Sum_probs=32.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 678999999997778999999999999999888765
No 425
>PLN02778 3,5-epimerase/4-reductase
Probab=94.39 E-value=0.12 Score=47.41 Aligned_cols=54 Identities=19% Similarity=0.141 Sum_probs=41.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---HhhhcC--CCcEEEEecC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---PEQITS--EADIVIAAAG 188 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~---l~~~l~--~ADIVIsa~g 188 (272)
..++++|.|++|.+|+.++..|.++|.+|+.......+ +...++ +.|+||.+.+
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa 66 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAG 66 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCc
Confidence 34789999999999999999999999998765443322 333333 6899997665
No 426
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=94.37 E-value=0.12 Score=48.42 Aligned_cols=54 Identities=28% Similarity=0.354 Sum_probs=41.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC-C-EEEEEeCCC------------------------C-CHhhhcCCCcEEEEecCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHH-A-TVSIVHALT------------------------K-NPEQITSEADIVIAAAGV 189 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~g-a-~V~v~~~~t------------------------~-~l~~~l~~ADIVIsa~g~ 189 (272)
+||.|||+|+ ||.+++..|..++ + ++.+.+... . .-.+.++.||+||-+.|.
T Consensus 1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~ 79 (313)
T COG0039 1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGV 79 (313)
T ss_pred CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCC
Confidence 5899999977 6999999998887 4 788886541 0 115789999999988886
Q ss_pred Cc
Q 024103 190 AN 191 (272)
Q Consensus 190 p~ 191 (272)
|.
T Consensus 80 pr 81 (313)
T COG0039 80 PR 81 (313)
T ss_pred CC
Confidence 53
No 427
>PRK07411 hypothetical protein; Validated
Probab=94.36 E-value=0.064 Score=51.63 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=30.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~ 168 (272)
.|+.++|+|||.|+. |-+++.+|+..|. ++++++.
T Consensus 35 ~L~~~~VlivG~GGl-G~~va~~La~~Gvg~l~lvD~ 70 (390)
T PRK07411 35 RLKAASVLCIGTGGL-GSPLLLYLAAAGIGRIGIVDF 70 (390)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCEEEEECC
Confidence 357899999999995 9999999999996 8888864
No 428
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.36 E-value=0.063 Score=47.39 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.+++|+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 3679999999999999999999999999998888765
No 429
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=94.35 E-value=0.056 Score=50.63 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=51.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC-CC---HhhhcCCCcEEEEecCCCc--cccCCCcCCCcEEEEeee
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT-KN---PEQITSEADIVIAAAGVAN--LVRGSWLKPGAVVLDVGT 209 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~g-a~V~v~~~~t-~~---l~~~l~~ADIVIsa~g~p~--~i~~~~vk~g~vviDig~ 209 (272)
.+|.|+|++|.+|.-+..+|.++. .++....+.. .+ .++...++|+||.|++.-- -+-+...+.|+.|||.+.
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~~~~~~~~~~~~DvvFlalp~~~s~~~~~~~~~~g~~VIDlSa 82 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKDAAARRELLNAADVAILCLPDDAAREAVALIDNPATRVIDAST 82 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCcccCchhhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 478999999999999999998876 2433333322 12 2334568999999996321 122233467899999987
Q ss_pred CCC
Q 024103 210 CPV 212 (272)
Q Consensus 210 ~~~ 212 (272)
...
T Consensus 83 dfR 85 (313)
T PRK11863 83 AHR 85 (313)
T ss_pred hhh
Confidence 754
No 430
>PRK08643 acetoin reductase; Validated
Probab=94.34 E-value=0.066 Score=47.13 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=31.4
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
||+++|.|+++-+|+.++..|+++|++|.++.|+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999999999999999999888765
No 431
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.34 E-value=0.071 Score=47.11 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=33.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~ 40 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISP 40 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH
Confidence 6789999999999899999999999999999887753
No 432
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.33 E-value=0.067 Score=47.46 Aligned_cols=37 Identities=16% Similarity=0.031 Sum_probs=32.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
...+++++|+|+++.+|+.++..|+++|++|+.+.|+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC
Confidence 3568999999998888999999999999999877654
No 433
>PRK12827 short chain dehydrogenase; Provisional
Probab=94.28 E-value=0.073 Score=46.23 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=31.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
++++|+++|.|+++.+|+.++..|+++|++|++..+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 367899999999999999999999999999888544
No 434
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.28 E-value=0.075 Score=48.81 Aligned_cols=39 Identities=33% Similarity=0.354 Sum_probs=34.9
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 131 ~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
..+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 367899999999999889999999999999999888653
No 435
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.26 E-value=0.074 Score=47.19 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=31.4
Q ss_pred CccceEEEEcCC--cccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g--~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++||.++|.|++ +-+|++++..|+++|++|+++.|+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 689999999997 235999999999999999988764
No 436
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.23 E-value=0.12 Score=41.52 Aligned_cols=49 Identities=20% Similarity=0.276 Sum_probs=35.4
Q ss_pred eEEEEcC-CcccHHHHHHHHHh-CCCE-EEEEeCCC----------------------CCHhhhcCCCcEEEEec
Q 024103 138 NAVVIGR-SNIVGLPTSLLLQR-HHAT-VSIVHALT----------------------KNPEQITSEADIVIAAA 187 (272)
Q Consensus 138 ~v~ViG~-g~~vG~~la~~L~~-~ga~-V~v~~~~t----------------------~~l~~~l~~ADIVIsa~ 187 (272)
||.|+|+ |. +|+.++..+.+ .+.+ |-.+.+.. .++++.+.++|++|-.+
T Consensus 2 rV~i~G~~Gr-MG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGR-MGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEETTTSH-HHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred EEEEECCCCH-HHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence 7899999 66 59999999998 5666 44455554 45677777788888666
No 437
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=94.23 E-value=0.13 Score=48.34 Aligned_cols=76 Identities=22% Similarity=0.237 Sum_probs=51.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-------------------CCHhh----hcC-CCcEEEEecC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQ----ITS-EADIVIAAAG 188 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t-------------------~~l~~----~l~-~ADIVIsa~g 188 (272)
-.|.+|+|.|.|. +|..+++++..+|+ .|+++.++. .++.+ ... .+|+||.++|
T Consensus 190 ~~g~~VlV~G~G~-vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 190 RPGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 3689999999865 69999999999998 577765431 11111 111 4799999998
Q ss_pred CCcccc--CCCcCCCcEEEEeeeC
Q 024103 189 VANLVR--GSWLKPGAVVLDVGTC 210 (272)
Q Consensus 189 ~p~~i~--~~~vk~g~vviDig~~ 210 (272)
.+..+. -+.++++-.++-+|..
T Consensus 269 ~~~~~~~~~~~l~~~G~iv~~G~~ 292 (371)
T cd08281 269 SVPALETAYEITRRGGTTVTAGLP 292 (371)
T ss_pred ChHHHHHHHHHHhcCCEEEEEccC
Confidence 765432 2356777677777754
No 438
>PRK07677 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.067 Score=47.12 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=31.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~ 35 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTK 35 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 68999999999899999999999999999887653
No 439
>PRK09135 pteridine reductase; Provisional
Probab=94.22 E-value=0.07 Score=46.35 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=32.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.++++++|.|+++.+|+.++..|+++|++|+++.|+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 467899999999999999999999999999988764
No 440
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=94.20 E-value=0.066 Score=52.31 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=34.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+++||+|+|||+|.+ |--++..|.+.|++|+++.|+.
T Consensus 171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs~ 208 (443)
T COG2072 171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRSP 208 (443)
T ss_pred cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecCC
Confidence 5789999999999998 9999999999999999998763
No 441
>PLN00106 malate dehydrogenase
Probab=94.20 E-value=0.18 Score=47.40 Aligned_cols=56 Identities=27% Similarity=0.409 Sum_probs=43.0
Q ss_pred ccceEEEEcC-CcccHHHHHHHHHhCCC--EEEEEeCC-----------------------CCCHhhhcCCCcEEEEecC
Q 024103 135 MGKNAVVIGR-SNIVGLPTSLLLQRHHA--TVSIVHAL-----------------------TKNPEQITSEADIVIAAAG 188 (272)
Q Consensus 135 ~gk~v~ViG~-g~~vG~~la~~L~~~ga--~V~v~~~~-----------------------t~~l~~~l~~ADIVIsa~g 188 (272)
..+||+|+|+ |. ||..++..|+.++. ++.+++.. ++++++.+++||+||.+.|
T Consensus 17 ~~~KV~IiGaaG~-VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 17 PGFKVAVLGAAGG-IGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 4579999999 66 69999999986663 67766532 2345788999999999998
Q ss_pred CCc
Q 024103 189 VAN 191 (272)
Q Consensus 189 ~p~ 191 (272)
.|.
T Consensus 96 ~~~ 98 (323)
T PLN00106 96 VPR 98 (323)
T ss_pred CCC
Confidence 653
No 442
>PRK07109 short chain dehydrogenase; Provisional
Probab=94.19 E-value=0.046 Score=51.08 Aligned_cols=38 Identities=26% Similarity=0.224 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+++|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~ 42 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGE 42 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46899999999988889999999999999999988753
No 443
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=94.19 E-value=0.095 Score=38.40 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=29.2
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+++|||+|-+ |--+|..|.+.|.+|+++++..
T Consensus 1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence 6899999885 9999999999999999999875
No 444
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.19 E-value=0.087 Score=48.94 Aligned_cols=35 Identities=20% Similarity=0.311 Sum_probs=31.1
Q ss_pred CCCCccceEEEEcC---CcccHHHHHHHHHhCCCEEEEE
Q 024103 131 GVEIMGKNAVVIGR---SNIVGLPTSLLLQRHHATVSIV 166 (272)
Q Consensus 131 ~~~l~gk~v~ViG~---g~~vG~~la~~L~~~ga~V~v~ 166 (272)
+.+++||.++|-|+ +| +|+++|..|+++|++|.+.
T Consensus 4 ~~~l~gk~alITGa~~s~G-IG~a~A~~la~~Ga~Vv~~ 41 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNG-YGWAIAKALAAAGAEILVG 41 (303)
T ss_pred CcCCCCCEEEEeCCCCCCc-HHHHHHHHHHHCCCEEEEE
Confidence 45789999999999 66 5999999999999999883
No 445
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.18 E-value=0.086 Score=45.83 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=32.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++++|+++|.|+++-+|+.++..|.++|++|+++.+.
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~ 38 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG 38 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 4689999999998889999999999999998877543
No 446
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.17 E-value=0.098 Score=46.68 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=31.3
Q ss_pred CCccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g---~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||.++|.|++ + +|++++..|+++|++|+++.|+
T Consensus 4 ~~~~k~~lItGa~~s~G-IG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 4 SLEGKTYVVMGVANKRS-IAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred ccCCCEEEEECCCCCCC-HHHHHHHHHHHCCCEEEEecCc
Confidence 5789999999985 6 5999999999999999988653
No 447
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.16 E-value=0.074 Score=46.17 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=32.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++++|+++|.|+++.+|+.++..|.++|+.|++..++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~ 39 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 4689999999998889999999999999988776554
No 448
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.16 E-value=0.066 Score=48.13 Aligned_cols=36 Identities=19% Similarity=0.125 Sum_probs=32.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~ 38 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE 38 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 478999999977789999999999999999998763
No 449
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.16 E-value=0.14 Score=47.91 Aligned_cols=53 Identities=19% Similarity=0.397 Sum_probs=41.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCCC------------------------CHhhhcCCCcEEEEecCCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK------------------------NPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t~------------------------~l~~~l~~ADIVIsa~g~p 190 (272)
.||.|||+|. ||.+++..|+.++. ++.+++.+.+ .-.+.+++|||||.+.|.|
T Consensus 4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvitaG~~ 82 (312)
T cd05293 4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAGAR 82 (312)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEECCCCC
Confidence 5899999977 69999999988883 6888875320 1235689999999999864
No 450
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.16 E-value=0.097 Score=45.25 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.6
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~ 37 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSA 37 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence 579999999999899999999999999999888753
No 451
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.15 E-value=0.059 Score=47.11 Aligned_cols=35 Identities=31% Similarity=0.382 Sum_probs=31.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+|+++|.|+++.+|+.++..|+++|++|+++.|+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~ 35 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGE 35 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999998754
No 452
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=94.15 E-value=0.11 Score=49.67 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=52.0
Q ss_pred ceEEEEcCCcccHHHHHHHHH-hCCC---EEEEEeCC-C--------------CCHh--hhcCCCcEEEEecCCC--ccc
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQ-RHHA---TVSIVHAL-T--------------KNPE--QITSEADIVIAAAGVA--NLV 193 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~-~~ga---~V~v~~~~-t--------------~~l~--~~l~~ADIVIsa~g~p--~~i 193 (272)
|+|.|||+.|+||+-+...|. +++. ++....+. . .++. +..++.|+++.+.|.. .-+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~~~v~~~~~~~~~~~vDivffa~g~~~s~~~ 80 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDIDALKALDIIITCQGGDYTNEI 80 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCcceEEcCcccccccCCCEEEEcCCHHHHHHH
Confidence 579999999999999999888 5553 33444321 1 1222 2567899999999853 224
Q ss_pred cCCCcCCC--cEEEEeeeCCC
Q 024103 194 RGSWLKPG--AVVLDVGTCPV 212 (272)
Q Consensus 194 ~~~~vk~g--~vviDig~~~~ 212 (272)
-+...+.| ++|||-.....
T Consensus 81 ~p~~~~aG~~~~VIDnSSa~R 101 (366)
T TIGR01745 81 YPKLRESGWQGYWIDAASSLR 101 (366)
T ss_pred HHHHHhCCCCeEEEECChhhh
Confidence 44456778 89999886643
No 453
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.13 E-value=0.12 Score=52.74 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=31.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.||+|+|||+|-+ |..+|..|.++|.+|+|+.+.
T Consensus 326 ~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~~ 359 (654)
T PRK12769 326 SDKRVAIIGAGPA-GLACADVLARNGVAVTVYDRH 359 (654)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence 6899999999998 999999999999999999764
No 454
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.12 E-value=0.048 Score=47.82 Aligned_cols=38 Identities=24% Similarity=0.306 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.++||+++|.|+++.+|..++..|+++|++|+++.|+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~ 46 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTE 46 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCH
Confidence 35899999999999999999999999999999887753
No 455
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=94.12 E-value=0.19 Score=48.34 Aligned_cols=76 Identities=22% Similarity=0.280 Sum_probs=55.3
Q ss_pred CCCccceEEEEcCC---------cccHHHHHHHHHhCCCEEEEEeCCC-----------CCHhhhcCCCcEEEEecCCCc
Q 024103 132 VEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 132 ~~l~gk~v~ViG~g---------~~vG~~la~~L~~~ga~V~v~~~~t-----------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
.+++|++|.|+|-+ +.-...++..|.++|++|.+.+-.- .++++.++.||.||..|..+.
T Consensus 309 ~~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~~v~~t~~~~ 388 (411)
T TIGR03026 309 GPLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADALVILTDHDE 388 (411)
T ss_pred hcccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCEEEEecCCHH
Confidence 35789999999931 2236788999999999999886431 366788999999999999887
Q ss_pred cc--cCCCcCC---CcEEEEe
Q 024103 192 LV--RGSWLKP---GAVVLDV 207 (272)
Q Consensus 192 ~i--~~~~vk~---g~vviDi 207 (272)
+- +.+.+++ ..+|+|.
T Consensus 389 ~~~~~~~~~~~~~~~~~v~D~ 409 (411)
T TIGR03026 389 FKDLDLEKIKDLMKGKVVVDT 409 (411)
T ss_pred HhccCHHHHHHhcCCCEEEeC
Confidence 63 3222321 3477773
No 456
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.09 E-value=0.13 Score=49.56 Aligned_cols=104 Identities=17% Similarity=0.224 Sum_probs=64.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHh--------------hhcCCCcEEEEecCCCcc---ccCCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPE--------------QITSEADIVIAAAGVANL---VRGSW 197 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l~--------------~~l~~ADIVIsa~g~p~~---i~~~~ 197 (272)
+.++|+|+|-|++ |++++..|.++|++|+.++++...+. ....++|+||-..|.+.. +. +-
T Consensus 2 ~~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~~~~~~l~-~A 79 (418)
T PRK00683 2 GLQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIKKEHPWVQ-AA 79 (418)
T ss_pred CCCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCCCCcHHHH-HH
Confidence 4578999999997 99999999999999999987543211 113557887766664421 11 11
Q ss_pred cCCCcEEEEeeeCCCCCCCCCCCCCCceEecccchhhhh----h-hceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 198 LKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAM----R-LASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 198 vk~g~vviDig~~~~~~~~~~~~~~~~k~~Gdvd~~~~~----~-~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
.+.|.. ++.|.++.... . ..-. |-|-.|.=|+.-|+.++++..
T Consensus 80 ~~~g~~----------------------vv~~~~~~~~~~~~~~~~~I~---ITGT~GKTTTt~ml~~iL~~~ 127 (418)
T PRK00683 80 IASHIP----------------------VVTDIQLAFQTPEFTRYPSLG---ITGSTGKTTTILFLEHLLKRL 127 (418)
T ss_pred HHCCCc----------------------EEEHHHHHHhhhhcCCCCEEE---EECCCChHHHHHHHHHHHHHc
Confidence 233322 22332221100 1 1223 558889999999999988764
No 457
>PRK06153 hypothetical protein; Provisional
Probab=94.08 E-value=0.065 Score=51.56 Aligned_cols=78 Identities=14% Similarity=0.174 Sum_probs=54.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-----------------------------------------
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT----------------------------------------- 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t----------------------------------------- 170 (272)
.|++++|+|||.||. |-.++.+|++.|. ++++++...
T Consensus 173 kL~~~~VaIVG~GG~-GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~ 251 (393)
T PRK06153 173 KLEGQRIAIIGLGGT-GSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVP 251 (393)
T ss_pred HHhhCcEEEEcCCcc-HHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEE
Confidence 478999999999996 9999999999995 888885320
Q ss_pred ------CCHhhhcCCCcEEEEecCCCc---cccCCCcCCCcEEEEeeeCC
Q 024103 171 ------KNPEQITSEADIVIAAAGVAN---LVRGSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 171 ------~~l~~~l~~ADIVIsa~g~p~---~i~~~~vk~g~vviDig~~~ 211 (272)
++-...+..+|+||.|+.... .+.....+.+.-.||+|+.-
T Consensus 252 ~~~~I~~~n~~~L~~~DiV~dcvDn~~aR~~ln~~a~~~gIP~Id~G~~l 301 (393)
T PRK06153 252 HPEYIDEDNVDELDGFTFVFVCVDKGSSRKLIVDYLEALGIPFIDVGMGL 301 (393)
T ss_pred EeecCCHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEeeecc
Confidence 000135677899999987532 23323334466678888663
No 458
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=94.06 E-value=0.12 Score=47.58 Aligned_cols=51 Identities=24% Similarity=0.407 Sum_probs=39.7
Q ss_pred EEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCcEEEEecCCCc
Q 024103 139 AVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 139 v~ViG~g~~vG~~la~~L~~~ga-~V~v~~~~t--------------------------~~l~~~l~~ADIVIsa~g~p~ 191 (272)
|.|||+|. +|..++..|+.+|. +|++++.+. .+ .+.+++||+||.++|.|.
T Consensus 1 I~IIGaG~-vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGN-VGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCCEEEEecCCCC
Confidence 57999977 59999999988774 888887542 22 356899999999998653
No 459
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=94.05 E-value=0.31 Score=43.42 Aligned_cols=90 Identities=21% Similarity=0.213 Sum_probs=58.4
Q ss_pred HHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CC----Hhhhc
Q 024103 121 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KN----PEQIT 177 (272)
Q Consensus 121 ~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t-------------------~~----l~~~l 177 (272)
..++..+.+...--+|++++|.|+++.+|..++.++..+|++|++..++. .+ +.+.+
T Consensus 130 ~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 209 (325)
T cd08253 130 LTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAAT 209 (325)
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHc
Confidence 33444444433334799999999867789999999999999988775532 11 11222
Q ss_pred --CCCcEEEEecCCCcc-ccCCCcCCCcEEEEeeeC
Q 024103 178 --SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 178 --~~ADIVIsa~g~p~~-i~~~~vk~g~vviDig~~ 210 (272)
+..|+++.++|.... ...++++++..++++|..
T Consensus 210 ~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 210 AGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred CCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeec
Confidence 247888887776432 223456666678888764
No 460
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=94.05 E-value=0.21 Score=45.16 Aligned_cols=93 Identities=16% Similarity=0.105 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CH----h
Q 024103 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NP----E 174 (272)
Q Consensus 118 ~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-------------------~l----~ 174 (272)
+.+...+..+.+....-.|.+++|.|.++.+|..+++++..+|+.|++..++.. +. .
T Consensus 121 ~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 200 (323)
T cd05282 121 INPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVK 200 (323)
T ss_pred ccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHH
Confidence 333444444544444457899999999888899999999999998777644311 11 1
Q ss_pred hhc--CCCcEEEEecCCCccc-cCCCcCCCcEEEEeeeC
Q 024103 175 QIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 175 ~~l--~~ADIVIsa~g~p~~i-~~~~vk~g~vviDig~~ 210 (272)
+.. +..|+|+..+|.+... -.++++++..++++|..
T Consensus 201 ~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 201 EATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred HHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence 122 3579999888865432 12456777788888754
No 461
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.04 E-value=0.088 Score=47.97 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
-+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999998889999999999999999988765
No 462
>PRK08267 short chain dehydrogenase; Provisional
Probab=94.04 E-value=0.068 Score=47.25 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=30.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
|+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~ 35 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINE 35 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6899999999899999999999999999987653
No 463
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=94.02 E-value=0.096 Score=48.48 Aligned_cols=36 Identities=17% Similarity=0.045 Sum_probs=32.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
+++||+|+|.|++|.+|+.++..|+++|.+|+++.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r 38 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIR 38 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEec
Confidence 678999999999888999999999999999888754
No 464
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=94.01 E-value=0.13 Score=50.13 Aligned_cols=74 Identities=20% Similarity=0.223 Sum_probs=53.3
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------CHhhhcCCCcEEEEe
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVIAA 186 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-----------------------------~l~~~l~~ADIVIsa 186 (272)
-.+|.|||-|- +|.|+|..|+. |.+|+.++++.. +..+.+++||++|.+
T Consensus 6 ~mkI~vIGlGy-vGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~ 83 (425)
T PRK15182 6 EVKIAIIGLGY-VGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIIT 83 (425)
T ss_pred CCeEEEECcCc-chHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEE
Confidence 36899999988 59999999876 689999986531 112457899999999
Q ss_pred cCCCc---------ccc------CCCcCCCcEEEEeeeCC
Q 024103 187 AGVAN---------LVR------GSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 187 ~g~p~---------~i~------~~~vk~g~vviDig~~~ 211 (272)
++.|. .+. ...+++|.+||+-.+-+
T Consensus 84 Vptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~ 123 (425)
T PRK15182 84 VPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVY 123 (425)
T ss_pred cCCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 99772 111 12457788888866554
No 465
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.99 E-value=0.13 Score=46.31 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=41.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC---CEEEEEeCCC---------------CCHhhhcCCCcEEEEecCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALT---------------KNPEQITSEADIVIAAAGV 189 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~g---a~V~v~~~~t---------------~~l~~~l~~ADIVIsa~g~ 189 (272)
.++.|||.|.+ |..++..|.+.| ..|++++|+. .+..+.+.++|+||-++..
T Consensus 3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence 47999999885 999999999888 6788888762 2334567889999988864
No 466
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=93.97 E-value=0.12 Score=47.75 Aligned_cols=52 Identities=25% Similarity=0.381 Sum_probs=41.1
Q ss_pred EEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCCC------------------------CHhhhcCCCcEEEEecCCCc
Q 024103 139 AVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK------------------------NPEQITSEADIVIAAAGVAN 191 (272)
Q Consensus 139 v~ViG~g~~vG~~la~~L~~~g--a~V~v~~~~t~------------------------~l~~~l~~ADIVIsa~g~p~ 191 (272)
+.|||+|. ||.+++..|+.+| .++++++.+.. .-.+.+++||+||.+.|.|.
T Consensus 1 i~iiGaG~-VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGN-VGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHHHhCCCCEEEEcCCCCC
Confidence 47999988 6999999999988 47998875420 11468899999999999753
No 467
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=93.95 E-value=0.14 Score=47.95 Aligned_cols=76 Identities=25% Similarity=0.223 Sum_probs=52.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCC-------------------CCH----hhhc--CCCcEEEEec
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT-------------------KNP----EQIT--SEADIVIAAA 187 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~-V~v~~~~t-------------------~~l----~~~l--~~ADIVIsa~ 187 (272)
-.|.+|+|.|.|. +|..+++++...|++ |+.+.++. ++. .+.. +..|+||.++
T Consensus 175 ~~g~~VlV~G~g~-vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~ 253 (358)
T TIGR03451 175 KRGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAV 253 (358)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 3699999999865 699999999999985 77665431 121 1222 2479999999
Q ss_pred CCCccccC--CCcCCCcEEEEeeeC
Q 024103 188 GVANLVRG--SWLKPGAVVLDVGTC 210 (272)
Q Consensus 188 g~p~~i~~--~~vk~g~vviDig~~ 210 (272)
|.+..+.. +.++++-.++-+|..
T Consensus 254 g~~~~~~~~~~~~~~~G~iv~~G~~ 278 (358)
T TIGR03451 254 GRPETYKQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred CCHHHHHHHHHHhccCCEEEEECCC
Confidence 97654322 356777778888864
No 468
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.94 E-value=0.14 Score=52.19 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.||+|+|||+|-+ |..++..|+++|.+|+++.+.
T Consensus 309 ~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~~ 342 (639)
T PRK12809 309 RSEKVAVIGAGPA-GLGCADILARAGVQVDVFDRH 342 (639)
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeCC
Confidence 5999999999887 999999999999999999754
No 469
>PRK06720 hypothetical protein; Provisional
Probab=93.94 E-value=0.074 Score=45.13 Aligned_cols=42 Identities=29% Similarity=0.377 Sum_probs=35.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP 173 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l 173 (272)
..++||.++|.|+++-+|++++..|.+.|++|.++.++.+.+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~ 53 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESG 53 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 347899999999988779999999999999999988765433
No 470
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=93.92 E-value=0.14 Score=45.68 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=41.8
Q ss_pred EEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC----------------HhhhcCCCcEEEEecCCC
Q 024103 139 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN----------------PEQITSEADIVIAAAGVA 190 (272)
Q Consensus 139 v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~----------------l~~~l~~ADIVIsa~g~p 190 (272)
|+|.|++|.+|+.++..|+++|.+|+...|+... ..+.+...|+||..++.+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~ 68 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEP 68 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCC
Confidence 5899999999999999999999999998875421 124567799999887743
No 471
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=93.92 E-value=0.17 Score=47.09 Aligned_cols=54 Identities=30% Similarity=0.445 Sum_probs=41.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC----------------------------CCHhhhcCCCcEEEEe
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------------------KNPEQITSEADIVIAA 186 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t----------------------------~~l~~~l~~ADIVIsa 186 (272)
.||.|+|++|.||..++..|+..|. +|+.+++.. .+ .+.+++||+||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence 4799999855579999999999884 588877531 12 3568999999999
Q ss_pred cCCCc
Q 024103 187 AGVAN 191 (272)
Q Consensus 187 ~g~p~ 191 (272)
.|.|.
T Consensus 80 ag~p~ 84 (309)
T cd05294 80 AGVPR 84 (309)
T ss_pred cCCCC
Confidence 99764
No 472
>PRK07985 oxidoreductase; Provisional
Probab=93.92 E-value=0.095 Score=47.85 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
.++||+++|.|+++-+|+.++..|+++|++|++..+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 579999999999888999999999999999988754
No 473
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.91 E-value=0.1 Score=45.57 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
+++|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 57899999999888999999999999999887644
No 474
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.87 E-value=0.13 Score=47.92 Aligned_cols=53 Identities=21% Similarity=0.245 Sum_probs=41.1
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC-------------------C------CHhhhcCCCcEEEEecCCC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------K------NPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t-------------------~------~l~~~l~~ADIVIsa~g~p 190 (272)
||.|||+|. ||.++|..|+.++. ++.+++.+. . .-++.+++|||||.+.|.|
T Consensus 1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~ 79 (307)
T cd05290 1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS 79 (307)
T ss_pred CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence 689999977 69999999988883 677776431 0 1257899999999999965
Q ss_pred c
Q 024103 191 N 191 (272)
Q Consensus 191 ~ 191 (272)
.
T Consensus 80 ~ 80 (307)
T cd05290 80 I 80 (307)
T ss_pred C
Confidence 3
No 475
>COG0540 PyrB Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism]
Probab=93.87 E-value=2.1 Score=40.05 Aligned_cols=144 Identities=17% Similarity=0.268 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCccEEEEcCCCCCCCCHHHHHhcCCcccccCccc
Q 024103 22 SQTYVRNKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 99 (272)
Q Consensus 22 s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~--~~~el~~~i~~ln~d~~v~Gi~vq~Plp~~~~~~~i~~~i~p~KDvdg~~ 99 (272)
|..=-.+=..+++++|.++.-..-.... ..+-|.+.++-|+.- +++.|.+--|.-. ..+++...+ +++
T Consensus 57 STRTr~SFE~A~krLG~~Vv~~~~~~sSs~KGEtL~DT~~tl~ay-g~D~iViRH~~eg---aa~~~a~~~------~~~ 126 (316)
T COG0540 57 STRTRLSFETAMKRLGADVVNFSDSESSSKKGETLADTIRTLSAY-GVDAIVIRHPEEG---AARLLAEFS------GVN 126 (316)
T ss_pred CCchhhhHHHHHHHcCCcEEeecCCcccccccccHHHHHHHHHhh-CCCEEEEeCcccc---HHHHHHHhc------CCC
Confidence 3333345567889999987544433222 246689999999984 5899999888553 223333222 222
Q ss_pred -cccccccccCCCCCccccCCHHHHHH---HHHHhCCCCccceEEEEc---CCcccHHHHHHHHHhCCCEEEEEeCCC--
Q 024103 100 -PLNIGNLAMRGREPLFIPCTPKGCIE---LLIRSGVEIMGKNAVVIG---RSNIVGLPTSLLLQRHHATVSIVHALT-- 170 (272)
Q Consensus 100 -~~n~g~l~~~~~~~~~~p~Ta~g~~~---~l~~~~~~l~gk~v~ViG---~g~~vG~~la~~L~~~ga~V~v~~~~t-- 170 (272)
.+|.|- ...-.|+ ++.+. +-+++ -.++|++|.++| .|.+ .+..+..|...|++|.+|.-.+
T Consensus 127 pvINaGD------G~~qHPT--Q~LLDl~TI~~~~-G~~~gl~iaivGDlkhsRv-a~S~~~~L~~~ga~v~lvsP~~L~ 196 (316)
T COG0540 127 PVINAGD------GSHQHPT--QALLDLYTIREEF-GRLDGLKIAIVGDLKHSRV-AHSNIQALKRFGAEVYLVSPETLL 196 (316)
T ss_pred ceEECCC------CCCCCcc--HHHHHHHHHHHHh-CCcCCcEEEEEccccchHH-HHHHHHHHHHcCCEEEEECchHhC
Confidence 456432 1222344 44443 34444 459999999999 6774 8999999999999999996321
Q ss_pred -------------------CCHhhhcCCCcEEEE
Q 024103 171 -------------------KNPEQITSEADIVIA 185 (272)
Q Consensus 171 -------------------~~l~~~l~~ADIVIs 185 (272)
..+++.+.++|++..
T Consensus 197 ~p~~i~~~l~~~~~~~~~~~~~e~~i~~~DVl~~ 230 (316)
T COG0540 197 PPEYILEELEEKGGVVVEHDSDEEVIEEADVLYM 230 (316)
T ss_pred CchhHHHHHhhcCceEEEecchhhhhccCCEEEe
Confidence 233458999999863
No 476
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=93.86 E-value=0.11 Score=55.58 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=32.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
-.||+|+|||+|-+ |..+|..|+++|.+|+|+.+.
T Consensus 304 ~~gkkVaVIGsGPA-GLsaA~~Lar~G~~VtVfE~~ 338 (944)
T PRK12779 304 AVKPPIAVVGSGPS-GLINAYLLAVEGFPVTVFEAF 338 (944)
T ss_pred CCCCeEEEECCCHH-HHHHHHHHHHCCCeEEEEeeC
Confidence 36999999999998 999999999999999999864
No 477
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=93.84 E-value=0.14 Score=49.27 Aligned_cols=71 Identities=27% Similarity=0.357 Sum_probs=50.1
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------------CCHhhhcCCCcEEEE
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQITSEADIVIA 185 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t--------------------------------~~l~~~l~~ADIVIs 185 (272)
+|.|||.|- +|.+++.+|+ .|.+|+.++++. .+..+..++||+||.
T Consensus 2 kI~VIGlGy-vGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGY-VGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII 79 (388)
T ss_pred EEEEECCCH-HHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence 689999988 4999998777 489999998652 112345688999999
Q ss_pred ecCCCc----------ccc------CCCcCCCcEEEEeeeCC
Q 024103 186 AAGVAN----------LVR------GSWLKPGAVVLDVGTCP 211 (272)
Q Consensus 186 a~g~p~----------~i~------~~~vk~g~vviDig~~~ 211 (272)
+++.|- .+. .. +++|.+||+-.+-|
T Consensus 80 ~Vpt~~~~k~~~~dl~~v~~v~~~i~~-~~~g~lVV~~STv~ 120 (388)
T PRK15057 80 ATPTDYDPKTNYFNTSSVESVIKDVVE-INPYAVMVIKSTVP 120 (388)
T ss_pred eCCCCCccCCCCcChHHHHHHHHHHHh-cCCCCEEEEeeecC
Confidence 998661 111 11 36788888766543
No 478
>PRK06444 prephenate dehydrogenase; Provisional
Probab=93.84 E-value=0.13 Score=44.95 Aligned_cols=59 Identities=12% Similarity=0.276 Sum_probs=42.4
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcCCCcEEEEecCCCccccCCCcCC-CcEEEEeeeC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKP-GAVVLDVGTC 210 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~~l~~~l~~ADIVIsa~g~p~~i~~~~vk~-g~vviDig~~ 210 (272)
+++|||+.|-+|+.++..|.+.|..|+ +++||+||-|++..... +++++ ..+++|++.-
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~------------~~~~DlVilavPv~~~~--~~i~~~~~~v~Dv~Sv 61 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNGLGVY------------IKKADHAFLSVPIDAAL--NYIESYDNNFVEISSV 61 (197)
T ss_pred EEEEEecCCcHHHHHHHHHHhCCCEEE------------ECCCCEEEEeCCHHHHH--HHHHHhCCeEEecccc
Confidence 689999844469999999999999886 46899999999843211 11111 1368899864
No 479
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.1 Score=48.21 Aligned_cols=37 Identities=27% Similarity=0.239 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
+++||.++|.|+++-+|++++..|+++|++|+++.|+
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 4789999999998778999999999999999998775
No 480
>PRK06180 short chain dehydrogenase; Provisional
Probab=93.82 E-value=0.078 Score=47.61 Aligned_cols=36 Identities=14% Similarity=-0.080 Sum_probs=32.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.+|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~ 38 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE 38 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCH
Confidence 478999999988899999999999999999988753
No 481
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=93.81 E-value=0.099 Score=48.68 Aligned_cols=36 Identities=28% Similarity=0.159 Sum_probs=32.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++||+++|.|++|.+|+.++..|+++|.+|+++.|+
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999998888999999999999999988754
No 482
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=93.81 E-value=0.13 Score=48.71 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=28.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEE
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV 166 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga-~V~v~ 166 (272)
..|++..|+|||+||. |-|++++|+..|+ ++=++
T Consensus 62 ~~Lk~s~VLVVGaGGL-GcPa~~YLaaaGvG~lGiV 96 (427)
T KOG2017|consen 62 LSLKNSSVLVVGAGGL-GCPAAQYLAAAGVGRLGIV 96 (427)
T ss_pred cccCCccEEEEccCCC-CCHHHHHHHHcCCCeeccc
Confidence 4678999999999996 9999999999986 54444
No 483
>PLN02602 lactate dehydrogenase
Probab=93.77 E-value=0.17 Score=48.03 Aligned_cols=53 Identities=21% Similarity=0.373 Sum_probs=41.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCCC------------------------CHhhhcCCCcEEEEecCCC
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK------------------------NPEQITSEADIVIAAAGVA 190 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga--~V~v~~~~t~------------------------~l~~~l~~ADIVIsa~g~p 190 (272)
+||.|||+|. ||..++..|+.++. ++.+++...+ .-.+.+++|||||.+.|.|
T Consensus 38 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVitAG~~ 116 (350)
T PLN02602 38 TKVSVVGVGN-VGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIVTAGAR 116 (350)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEECCCCC
Confidence 6999999977 69999999988883 6888875320 1135589999999999965
No 484
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=93.74 E-value=0.098 Score=46.12 Aligned_cols=35 Identities=23% Similarity=0.207 Sum_probs=31.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+|+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~ 36 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINS 36 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 68999999999899999999999999998887653
No 485
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.73 E-value=0.11 Score=47.13 Aligned_cols=35 Identities=11% Similarity=0.210 Sum_probs=30.9
Q ss_pred CccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g---~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++||.++|.|++ | +|++++..|+++|++|+++.|+
T Consensus 3 l~~k~~lItGas~~~G-IG~aiA~~la~~G~~Vil~~r~ 40 (274)
T PRK08415 3 MKGKKGLIVGVANNKS-IAYGIAKACFEQGAELAFTYLN 40 (274)
T ss_pred cCCcEEEEECCCCCCC-HHHHHHHHHHHCCCEEEEEecC
Confidence 579999999984 6 4999999999999999988765
No 486
>PRK06483 dihydromonapterin reductase; Provisional
Probab=93.73 E-value=0.095 Score=45.60 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=31.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 136 gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
+|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTH 36 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc
Confidence 57899999988889999999999999999988764
No 487
>PRK07831 short chain dehydrogenase; Provisional
Probab=93.72 E-value=0.11 Score=46.10 Aligned_cols=38 Identities=21% Similarity=0.155 Sum_probs=31.6
Q ss_pred CCccceEEEEcCCc-ccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 133 EIMGKNAVVIGRSN-IVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 133 ~l~gk~v~ViG~g~-~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
.++||+++|.|+++ -+|+.++..|+++|++|+++.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~ 52 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHE 52 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCH
Confidence 35789999999853 359999999999999999887654
No 488
>PLN02206 UDP-glucuronate decarboxylase
Probab=93.70 E-value=0.17 Score=49.37 Aligned_cols=37 Identities=24% Similarity=0.251 Sum_probs=32.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 132 ~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
..-++++|+|.|++|.||+.++..|+++|.+|+++.+
T Consensus 115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~ 151 (442)
T PLN02206 115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN 151 (442)
T ss_pred cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence 3347899999999999999999999999999988764
No 489
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=93.68 E-value=0.22 Score=46.64 Aligned_cols=52 Identities=15% Similarity=-0.001 Sum_probs=37.5
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 117 p~Ta~g~~~~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
||.....+..|.+...--.|.+++|.|+++.||..+++++..+|++|+.+.+
T Consensus 140 ~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~ 191 (348)
T PLN03154 140 GMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 191 (348)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcC
Confidence 4444444555544333347999999999666899999999999998776644
No 490
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.67 E-value=0.095 Score=46.29 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=30.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEe
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH 167 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~ 167 (272)
.++||+++|.|+++-+|+.++..|+++|++|.++.
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~ 39 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIH 39 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEe
Confidence 46899999999999999999999999999865554
No 491
>PRK07454 short chain dehydrogenase; Provisional
Probab=93.65 E-value=0.086 Score=45.94 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=32.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t 170 (272)
++|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~ 40 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQ 40 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 568999999988889999999999999999998764
No 492
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=93.64 E-value=0.13 Score=45.29 Aligned_cols=36 Identities=31% Similarity=0.367 Sum_probs=31.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++.|.++|-|+|.-+||++++.|+++||+|.++..+
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecc
Confidence 467889999888778999999999999999999865
No 493
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.64 E-value=0.081 Score=46.43 Aligned_cols=34 Identities=32% Similarity=0.383 Sum_probs=30.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~ 166 (272)
++++|+++|.|+++-+|+.++..|+++|++|.++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~ 36 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIH 36 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 3678999999999999999999999999998775
No 494
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.60 E-value=0.1 Score=50.58 Aligned_cols=125 Identities=22% Similarity=0.208 Sum_probs=67.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-CHh---hhcCCCcEEEEecCCCcc---ccCCCcCCCcEEEEeeeC
Q 024103 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPE---QITSEADIVIAAAGVANL---VRGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 138 ~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-~l~---~~l~~ADIVIsa~g~p~~---i~~~~vk~g~vviDig~~ 210 (272)
+|+|+|.|++ |++++..|.++|++|+++++... ... +.++...+-+.. |.+.. ++..+-+...+|+--|++
T Consensus 2 ~v~viG~G~s-G~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~-g~~~~~~~~~~~~~~~d~vv~s~gi~ 79 (459)
T PRK02705 2 IAHVIGLGRS-GIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKL-GKPLELESFQPWLDQPDLVVVSPGIP 79 (459)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEE-CCccchhhhhHHhhcCCEEEECCCCC
Confidence 6899999997 99999999999999999986542 111 234333433311 21110 000111234556555555
Q ss_pred CCCCCCCCCCCCCceEecccchhh-hhhhceEeccCCCcccHHHHHHHHHHHHHHH
Q 024103 211 PVDVSVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA 265 (272)
Q Consensus 211 ~~~~~~~~~~~~~~k~~Gdvd~~~-~~~~~~~~tpvpGGvGp~T~amL~~n~v~a~ 265 (272)
++..........+-+++++.++.. ...... +--|-|-.|.=|+.-|+.++++..
T Consensus 80 ~~~~~~~~a~~~~i~v~~~~~~~~~~~~~~~-~I~VTGT~GKTTTt~ml~~iL~~~ 134 (459)
T PRK02705 80 WDHPTLVELRERGIEVIGEIELAWRALKHIP-WVGITGTNGKTTVTALLAHILQAA 134 (459)
T ss_pred CCCHHHHHHHHcCCcEEEhHHHHHHhhcCCC-EEEEeCCCchHHHHHHHHHHHHHc
Confidence 432000000001234666665421 111111 123568888999999999888754
No 495
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.58 E-value=0.092 Score=47.69 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=32.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 134 l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~ 39 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 39 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCC
Confidence 689999999999889999999999999999887653
No 496
>PRK06128 oxidoreductase; Provisional
Probab=93.55 E-value=0.12 Score=47.09 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=32.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~ 168 (272)
.++||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~ 87 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYL 87 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 378999999999888999999999999999887654
No 497
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=93.55 E-value=0.25 Score=44.67 Aligned_cols=76 Identities=20% Similarity=0.127 Sum_probs=52.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------CH----hhhc--CCCcEEEEecCCCc
Q 024103 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NP----EQIT--SEADIVIAAAGVAN 191 (272)
Q Consensus 135 ~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~t~-----------------~l----~~~l--~~ADIVIsa~g~p~ 191 (272)
.+.+++|.|+++.+|..+++++..+|++|+++.++.+ +. ...+ +..|+|+.++|.+.
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~ 225 (325)
T cd05280 146 EDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDV 225 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHH
Confidence 4568999999777899999999999999877765321 10 1111 24688888887653
Q ss_pred cc-cCCCcCCCcEEEEeeeC
Q 024103 192 LV-RGSWLKPGAVVLDVGTC 210 (272)
Q Consensus 192 ~i-~~~~vk~g~vviDig~~ 210 (272)
+- --+.++++..++++|..
T Consensus 226 ~~~~~~~l~~~g~~v~~g~~ 245 (325)
T cd05280 226 LANLLKQTKYGGVVASCGNA 245 (325)
T ss_pred HHHHHHhhcCCCEEEEEecC
Confidence 31 22345677788898865
No 498
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=93.50 E-value=0.078 Score=48.81 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=32.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 133 ~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
++.+|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999999998888999999999999999988764
No 499
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=93.49 E-value=0.19 Score=48.61 Aligned_cols=53 Identities=26% Similarity=0.204 Sum_probs=43.5
Q ss_pred ccCCHHHHHH----HHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024103 116 IPCTPKGCIE----LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (272)
Q Consensus 116 ~p~Ta~g~~~----~l~~~~~~l~gk~v~ViG~g~~vG~~la~~L~~~ga~V~v~~~~ 169 (272)
.++|++|+.- .++..+.+++|++|.|=|.|+ ||..++..|.+.|++|+.+...
T Consensus 183 ~~aTg~Gv~~~~~~a~~~~g~~l~G~rVaVQG~GN-Vg~~aa~~l~~~GAkvva~sds 239 (411)
T COG0334 183 SEATGYGVFYAIREALKALGDDLEGARVAVQGFGN-VGQYAAEKLHELGAKVVAVSDS 239 (411)
T ss_pred CcccceehHHHHHHHHHHcCCCcCCCEEEEECccH-HHHHHHHHHHHcCCEEEEEEcC
Confidence 3688888543 445677789999999999988 5999999999999998887644
No 500
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.48 E-value=0.21 Score=46.85 Aligned_cols=55 Identities=11% Similarity=0.207 Sum_probs=41.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-------EEEEEeCCC--------------------------CCHhhhcCCCcEE
Q 024103 137 KNAVVIGRSNIVGLPTSLLLQRHHA-------TVSIVHALT--------------------------KNPEQITSEADIV 183 (272)
Q Consensus 137 k~v~ViG~g~~vG~~la~~L~~~ga-------~V~v~~~~t--------------------------~~l~~~l~~ADIV 183 (272)
+||.|||++|.||..++..|...|. ++.+.+... .+.++.+++||||
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDiv 82 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA 82 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCEE
Confidence 5899999945579999999988773 577776521 1235789999999
Q ss_pred EEecCCCc
Q 024103 184 IAAAGVAN 191 (272)
Q Consensus 184 Isa~g~p~ 191 (272)
|.+.|.|.
T Consensus 83 vitaG~~~ 90 (322)
T cd01338 83 LLVGAKPR 90 (322)
T ss_pred EEeCCCCC
Confidence 99999753
Done!