BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>024104
MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAV
SMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTA
GTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVII
GRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPS
NLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA

High Scoring Gene Products

Symbol, full name Information P value
AT3G59390 protein from Arabidopsis thaliana 1.1e-105
2410131K14Rik
RIKEN cDNA 2410131K14 gene
protein from Mus musculus 2.2e-18
Q17QN8
UPF0454 protein C12orf49 homolog
protein from Bos taurus 5.8e-18
C12orf49
UPF0454 protein C12orf49
protein from Homo sapiens 8.6e-17
RCJMB04_18o22
UPF0454 protein C12orf49 homolog
protein from Gallus gallus 1.8e-16
zgc:110063 gene_product from Danio rerio 6.0e-16

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  024104
        (272 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2081192 - symbol:AT3G59390 "AT3G59390" species...  1046  1.1e-105  1
MGI|MGI:1924042 - symbol:2410131K14Rik "RIKEN cDNA 241013...   222  2.2e-18   1
UNIPROTKB|Q17QN8 - symbol:Q17QN8 "UPF0454 protein C12orf4...   218  5.8e-18   1
UNIPROTKB|Q9H741 - symbol:C12orf49 "UPF0454 protein C12or...   207  8.6e-17   1
UNIPROTKB|Q5ZJE4 - symbol:RCJMB04_18o22 "UPF0454 protein ...   204  1.8e-16   1
ZFIN|ZDB-GENE-050522-367 - symbol:zgc:110063 "zgc:110063"...   199  6.0e-16   1


>TAIR|locus:2081192 [details] [associations]
            symbol:AT3G59390 "AT3G59390" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 InterPro:IPR019352
            PANTHER:PTHR13481 Pfam:PF10218 IPI:IPI00528598 RefSeq:NP_191498.2
            RefSeq:NP_974460.1 UniGene:At.34636 PRIDE:F4J8A2
            EnsemblPlants:AT3G59390.1 EnsemblPlants:AT3G59390.2 GeneID:825108
            KEGG:ath:AT3G59390 OMA:VVHENAY Uniprot:F4J8A2
        Length = 273

 Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
 Identities = 182/249 (73%), Positives = 218/249 (87%)

Query:    24 ISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNL 83
             +SAIRKDIGF E   C+TTVQGRYL+SDD G VCDA+S++ ++RCCP KGE+FSC GCN+
Sbjct:    25 VSAIRKDIGFLEERSCRTTVQGRYLISDDEGNVCDALSLESRTRCCPWKGERFSCHGCNI 84

Query:    84 LSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVH 143
             LSQCCNSYE+CVSCC+NP++TL E+V+ VK+AKP T+GTY SVFDFCAGRCRHNSESVVH
Sbjct:    85 LSQCCNSYEFCVSCCLNPSQTLLEKVVKVKVAKPATSGTYKSVFDFCAGRCRHNSESVVH 144

Query:   144 ENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKL 203
             ENAY S+FHHCFS+ SNASGA +TQ+E RL GI VI+G QG+SCD+VCKS GQ CV+NKL
Sbjct:   145 ENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVIVGSQGDSCDAVCKSRGQLCVMNKL 204

Query:   204 ILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDGSHR 263
              LLNQC+++++YM+CK  CLAS GADQPAEV +DAP +L P ACLYTR QS+LSCDGSH+
Sbjct:   205 SLLNQCDVMKRYMNCKGSCLASAGADQPAEVVEDAPRDLYPGACLYTRTQSLLSCDGSHQ 264

Query:   264 HTRRLCPCA 272
             HTRRLCPCA
Sbjct:   265 HTRRLCPCA 273


>MGI|MGI:1924042 [details] [associations]
            symbol:2410131K14Rik "RIKEN cDNA 2410131K14 gene"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] MGI:MGI:1924042 GO:GO:0005576
            GeneTree:ENSGT00390000008031 HOVERGEN:HBG097587 OMA:LGYICER
            InterPro:IPR019352 PANTHER:PTHR13481 Pfam:PF10218 eggNOG:NOG237537
            HOGENOM:HOG000044706 OrthoDB:EOG4XD3S2 EMBL:AK090380 EMBL:BC104372
            EMBL:BC104373 IPI:IPI00277833 RefSeq:NP_001074705.1
            UniGene:Mm.103428 ProteinModelPortal:Q8BTG6 PRIDE:Q8BTG6
            Ensembl:ENSMUST00000049138 GeneID:76792 KEGG:mmu:76792
            UCSC:uc008zgj.1 InParanoid:Q8BTG6 NextBio:345819 Bgee:Q8BTG6
            CleanEx:MM_2410131K14RIK Genevestigator:Q8BTG6 Uniprot:Q8BTG6
        Length = 205

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 45/123 (36%), Positives = 69/123 (56%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
             C+ +VQG++LL+D+ GYVC+   +     CC       +++ C GC L + CC +YEYCV
Sbjct:    75 CRNSVQGKHLLTDELGYVCERKDLLANG-CCDVSVPSTKQYCCDGC-LANGCCEAYEYCV 132

Query:    96 SCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
             SCC+ P++ L  E+ LN   +A           F+ C  +CR +S+SV HEN Y      
Sbjct:   133 SCCLQPSKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTYRDPIAK 192

Query:   153 HCF 155
             +C+
Sbjct:   193 YCY 195


>UNIPROTKB|Q17QN8 [details] [associations]
            symbol:Q17QN8 "UPF0454 protein C12orf49 homolog"
            species:9913 "Bos taurus" [GO:0005576 "extracellular region"
            evidence=IEA] GO:GO:0005576 EMBL:BC118254 IPI:IPI00700058
            RefSeq:NP_001069491.1 UniGene:Bt.26675 PRIDE:Q17QN8
            Ensembl:ENSBTAT00000063283 GeneID:534423 KEGG:bta:534423 CTD:534423
            GeneTree:ENSGT00390000008031 HOVERGEN:HBG097587 OMA:LGYICER
            NextBio:20876398 InterPro:IPR019352 PANTHER:PTHR13481 Pfam:PF10218
            Uniprot:Q17QN8
        Length = 205

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 46/123 (37%), Positives = 69/123 (56%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEK--GEK-FSCQGCNLLSQCCNSYEYCV 95
             C+ ++QG++L++D+ GYVC+   +     CC     G K + C GC L S CC++YEYCV
Sbjct:    75 CRNSIQGKHLITDELGYVCERRDLLVNG-CCNVNVPGTKQYCCDGC-LSSGCCSAYEYCV 132

Query:    96 SCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
             SCC+ P + L  E+ LN   +A           F+ C  +CR +S+SV HEN Y      
Sbjct:   133 SCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTYRDPIAK 192

Query:   153 HCF 155
             +C+
Sbjct:   193 YCY 195


>UNIPROTKB|Q9H741 [details] [associations]
            symbol:C12orf49 "UPF0454 protein C12orf49" species:9606
            "Homo sapiens" [GO:0005576 "extracellular region" evidence=IEA]
            GO:GO:0005576 HOVERGEN:HBG097587 OMA:LGYICER InterPro:IPR019352
            PANTHER:PTHR13481 Pfam:PF10218 eggNOG:NOG237537
            HOGENOM:HOG000044706 OrthoDB:EOG4XD3S2 EMBL:AK025068 EMBL:AK222983
            EMBL:BC019843 IPI:IPI00015479 RefSeq:NP_079014.1 UniGene:Hs.592011
            ProteinModelPortal:Q9H741 IntAct:Q9H741 STRING:Q9H741 DMDM:74733622
            PRIDE:Q9H741 Ensembl:ENST00000261318 GeneID:79794 KEGG:hsa:79794
            UCSC:uc001tvz.1 CTD:79794 GeneCards:GC12M117153 HGNC:HGNC:26128
            HPA:HPA026905 neXtProt:NX_Q9H741 PharmGKB:PA128394721
            InParanoid:Q9H741 PhylomeDB:Q9H741 GenomeRNAi:79794 NextBio:69328
            ArrayExpress:Q9H741 Bgee:Q9H741 CleanEx:HS_C12orf49
            Genevestigator:Q9H741 Uniprot:Q9H741
        Length = 205

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 42/123 (34%), Positives = 68/123 (55%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
             C+ ++QG++L++D+ GYVC+   +     CC       +++ C GC   + CC++YEYCV
Sbjct:    75 CRNSIQGKHLITDELGYVCERKDLLVNG-CCNVNVPSTKQYCCDGC-WPNGCCSAYEYCV 132

Query:    96 SCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
             SCC+ P + L  E+ LN   +A           F+ C  +CR +S+SV HEN Y      
Sbjct:   133 SCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTYRDPIAK 192

Query:   153 HCF 155
             +C+
Sbjct:   193 YCY 195


>UNIPROTKB|Q5ZJE4 [details] [associations]
            symbol:RCJMB04_18o22 "UPF0454 protein C12orf49 homolog"
            species:9031 "Gallus gallus" [GO:0005576 "extracellular region"
            evidence=IEA] GO:GO:0005576 GeneTree:ENSGT00390000008031
            HOVERGEN:HBG097587 OMA:LGYICER InterPro:IPR019352 PANTHER:PTHR13481
            Pfam:PF10218 EMBL:AJ720490 IPI:IPI00599851 RefSeq:NP_001007842.1
            UniGene:Gga.22617 Ensembl:ENSGALT00000013379 GeneID:417026
            KEGG:gga:417026 CTD:417026 eggNOG:NOG237537 HOGENOM:HOG000044706
            InParanoid:Q5ZJE4 OrthoDB:EOG4XD3S2 NextBio:20820406 Uniprot:Q5ZJE4
        Length = 205

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 43/123 (34%), Positives = 67/123 (54%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
             C+ +VQG+ L++D+ GY+C+   +     CC       + +SC  C L + CC+ YEYCV
Sbjct:    75 CRNSVQGKLLITDELGYICERKDLLVNG-CCNVNVPSTKLYSCDSC-LPNGCCSVYEYCV 132

Query:    96 SCCVNPART-LKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
             SCC+ P++  L E+ LN   +A           F+ C  +CR +S+SV HEN Y      
Sbjct:   133 SCCLQPSKQHLLERFLNRAAMAFQNLFMAVEDRFELCLAKCRTSSQSVQHENTYRDPIAK 192

Query:   153 HCF 155
             +C+
Sbjct:   193 YCY 195


>ZFIN|ZDB-GENE-050522-367 [details] [associations]
            symbol:zgc:110063 "zgc:110063" species:7955 "Danio
            rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=IEA] ZFIN:ZDB-GENE-050522-367
            GO:GO:0005576 HOVERGEN:HBG097587 InterPro:IPR019352
            PANTHER:PTHR13481 Pfam:PF10218 eggNOG:NOG237537
            HOGENOM:HOG000044706 OrthoDB:EOG4XD3S2 EMBL:BC095168
            IPI:IPI00607345 RefSeq:NP_001018573.1 UniGene:Dr.85020
            GeneID:553772 KEGG:dre:553772 InParanoid:Q503V3 NextBio:20880494
            ArrayExpress:Q503V3 Uniprot:Q503V3
        Length = 199

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 44/125 (35%), Positives = 69/125 (55%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCC---PEKGEKFSCQGCNLLSQCCNSYEYCV 95
             C+ ++QG+ LL+D+ GYVC+   +     CC        ++ C+ C L + CC+ YEYCV
Sbjct:    69 CRNSIQGKSLLTDELGYVCERKDLLVNG-CCNVNAPSSSQYVCKSC-LSNGCCSIYEYCV 126

Query:    96 SCCVNPART-LKEQVLNVKIAKPTTAGTYGSV---FDFCAGRCRHNSESVVHENAYLS-D 150
             SCC+ P +  L E+ LN   A       + +V   F+ C  +CR +S+SV HEN Y +  
Sbjct:   127 SCCLQPDKQPLLERFLNR--AAEGFQNLFTAVEDHFELCLAKCRTSSQSVQHENTYRNPQ 184

Query:   151 FHHCF 155
               +C+
Sbjct:   185 AKYCY 189


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      272       256   0.00086  114 3  11 22  0.42    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  208 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.25u 0.12s 21.37t   Elapsed:  00:00:01
  Total cpu time:  21.25u 0.12s 21.37t   Elapsed:  00:00:01
  Start:  Sat May 11 11:00:47 2013   End:  Sat May 11 11:00:48 2013

Back to top