Your job contains 1 sequence.
>024105
MAERGGERGAFGRGFGRGGRGDRGGPRGRRRAGRREEEEKWVPVTKLGRLVREGKIRSLE
QIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGL
GVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAP
RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRET
RFVKSPYQEYTDLLTPKPINKAVITEVDQAEP
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024105
(272 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2016585 - symbol:XW6 species:3702 "Arabidopsis... 1035 1.6e-104 1
TAIR|locus:504956181 - symbol:AT1G58684 species:3702 "Ara... 1035 1.6e-104 1
TAIR|locus:2826988 - symbol:AT1G58983 species:3702 "Arabi... 1035 1.6e-104 1
TAIR|locus:2826968 - symbol:AT1G59359 species:3702 "Arabi... 1035 1.6e-104 1
TAIR|locus:2103539 - symbol:AT3G57490 species:3702 "Arabi... 1035 1.6e-104 1
TAIR|locus:2054406 - symbol:AT2G41840 species:3702 "Arabi... 1022 3.7e-103 1
FB|FBgn0004867 - symbol:RpS2 "Ribosomal protein S2" speci... 896 8.3e-90 1
ZFIN|ZDB-GENE-040426-2454 - symbol:rps2 "ribosomal protei... 895 1.1e-89 1
UNIPROTKB|E1C4M0 - symbol:E1C4M0 "Uncharacterized protein... 891 2.8e-89 1
UNIPROTKB|E2QWY6 - symbol:LOC608162 "Uncharacterized prot... 890 3.6e-89 1
RGD|2323085 - symbol:LOC100359960 "ribosomal protein S2-l... 890 3.6e-89 1
RGD|619887 - symbol:Rps2 "ribosomal protein S2" species:1... 890 3.6e-89 1
UNIPROTKB|E9PU05 - symbol:LOC100359960 "Protein LOC100359... 890 3.6e-89 1
UNIPROTKB|O18789 - symbol:RPS2 "40S ribosomal protein S2"... 888 5.9e-89 1
UNIPROTKB|P15880 - symbol:RPS2 "40S ribosomal protein S2"... 888 5.9e-89 1
UNIPROTKB|E9PTY3 - symbol:LOC100359960 "Protein LOC100359... 875 1.4e-87 1
DICTYBASE|DDB_G0293742 - symbol:rps2 "ribosomal protein S... 853 3.0e-85 1
RGD|1588815 - symbol:LOC688473 "similar to 40S ribosomal ... 845 2.1e-84 1
RGD|1562399 - symbol:RGD1562399 "similar to 40S ribosomal... 842 4.4e-84 1
MGI|MGI:3643826 - symbol:Gm8225 "predicted gene 8225" spe... 839 9.1e-84 1
POMBASE|SPCC576.08c - symbol:rps2 "40S ribosomal protein ... 828 1.3e-82 1
GENEDB_PFALCIPARUM|PF14_0448 - symbol:PF14_0448 "ribosoma... 825 2.8e-82 1
UNIPROTKB|Q8IL02 - symbol:PF14_0448 "40S ribosomal protei... 825 2.8e-82 1
WB|WBGene00004471 - symbol:rps-2 species:6239 "Caenorhabd... 814 4.1e-81 1
UNIPROTKB|F1LUI9 - symbol:F1LUI9 "Uncharacterized protein... 809 1.4e-80 1
UNIPROTKB|F1LZV8 - symbol:F1LZV8 "Uncharacterized protein... 809 1.4e-80 1
UNIPROTKB|J9P0D3 - symbol:J9P0D3 "Uncharacterized protein... 798 2.0e-79 1
UNIPROTKB|G4MPT3 - symbol:MGG_16248 "30S ribosomal protei... 798 2.0e-79 1
ASPGD|ASPL0000036430 - symbol:AN3413 species:162425 "Emer... 782 1.0e-77 1
RGD|1560789 - symbol:RGD1560789 "similar to ribosomal pro... 771 1.5e-76 1
CGD|CAL0004119 - symbol:RPS21 species:5476 "Candida albic... 752 1.5e-74 1
UNIPROTKB|E9PSQ6 - symbol:LOC100359960 "Protein LOC100359... 750 2.5e-74 1
UNIPROTKB|E9PT76 - symbol:E9PT76 "Uncharacterized protein... 739 3.6e-73 1
SGD|S000003091 - symbol:RPS2 "Protein component of the sm... 736 7.5e-73 1
UNIPROTKB|F1M5X9 - symbol:F1M5X9 "Uncharacterized protein... 735 9.6e-73 1
UNIPROTKB|I3LJ87 - symbol:RPS2 "Uncharacterized protein" ... 708 7.0e-70 1
UNIPROTKB|F1LVB4 - symbol:F1LVB4 "Uncharacterized protein... 695 1.7e-68 1
UNIPROTKB|E9PMM9 - symbol:RPS2 "40S ribosomal protein S2"... 681 5.1e-67 1
UNIPROTKB|H0YEN5 - symbol:RPS2 "40S ribosomal protein S2"... 634 4.8e-62 1
UNIPROTKB|E9PM36 - symbol:RPS2 "40S ribosomal protein S2"... 629 1.6e-61 1
UNIPROTKB|I3L404 - symbol:RPS2 "40S ribosomal protein S2"... 628 2.1e-61 1
UNIPROTKB|J9PAX1 - symbol:J9PAX1 "Uncharacterized protein... 609 2.2e-59 1
UNIPROTKB|F1S275 - symbol:F1S275 "Uncharacterized protein... 584 9.6e-57 1
UNIPROTKB|E9PPT0 - symbol:RPS2 "40S ribosomal protein S2"... 546 1.0e-52 1
UNIPROTKB|F1LUJ6 - symbol:F1LUJ6 "Uncharacterized protein... 546 1.0e-52 1
UNIPROTKB|E2QWF1 - symbol:E2QWF1 "Uncharacterized protein... 466 3.1e-44 1
UNIPROTKB|J9P3M6 - symbol:J9P3M6 "Uncharacterized protein... 462 8.1e-44 1
RGD|1586357 - symbol:LOC689943 "similar to 40S ribosomal ... 292 1.1e-42 2
UNIPROTKB|F1LUE4 - symbol:F1LUE4 "Uncharacterized protein... 430 2.0e-40 1
UNIPROTKB|F1M474 - symbol:F1M474 "Uncharacterized protein... 217 1.9e-37 2
UNIPROTKB|F1PW41 - symbol:F1PW41 "Uncharacterized protein... 399 3.9e-37 1
UNIPROTKB|F1LUA6 - symbol:F1LUA6 "Uncharacterized protein... 382 2.4e-35 1
UNIPROTKB|E9PQD7 - symbol:RPS2 "40S ribosomal protein S2"... 350 6.0e-32 1
RGD|1589430 - symbol:LOC680646 "similar to 40S ribosomal ... 324 3.4e-29 1
UNIPROTKB|E9PTW0 - symbol:E9PTW0 "Uncharacterized protein... 317 1.9e-28 1
UNIPROTKB|F1M103 - symbol:F1M103 "Uncharacterized protein... 300 1.2e-26 1
UNIPROTKB|F1M7B2 - symbol:F1M7B2 "Uncharacterized protein... 264 7.8e-23 1
UNIPROTKB|F1M9M7 - symbol:F1M9M7 "Uncharacterized protein... 245 8.0e-21 1
TIGR_CMR|BA_0127 - symbol:BA_0127 "ribosomal protein S5" ... 209 5.3e-17 1
TIGR_CMR|CHY_2292 - symbol:CHY_2292 "ribosomal protein S5... 199 6.0e-16 1
TIGR_CMR|GSU_2840 - symbol:GSU_2840 "ribosomal protein S5... 191 4.2e-15 1
TIGR_CMR|SPO_0502 - symbol:SPO_0502 "ribosomal protein S5... 179 7.9e-14 1
TIGR_CMR|DET_0491 - symbol:DET_0491 "ribosomal protein S5... 177 1.3e-13 1
TIGR_CMR|CJE_1858 - symbol:CJE_1858 "ribosomal protein S5... 175 2.1e-13 1
TAIR|locus:2057645 - symbol:EMB3113 "EMBRYO DEFECTIVE 311... 177 2.4e-13 1
UNIPROTKB|Q9KP01 - symbol:rpsE "30S ribosomal protein S5"... 172 4.4e-13 1
TIGR_CMR|VC_2579 - symbol:VC_2579 "ribosomal protein S5" ... 172 4.4e-13 1
TIGR_CMR|SO_0248 - symbol:SO_0248 "ribosomal protein S5" ... 165 2.4e-12 1
TIGR_CMR|CPS_0618 - symbol:CPS_0618 "ribosomal protein S5... 164 3.1e-12 1
UNIPROTKB|P66574 - symbol:rpsE "30S ribosomal protein S5"... 163 3.9e-12 1
UNIPROTKB|P0A7W1 - symbol:rpsE "30S ribosomal subunit pro... 159 1.0e-11 1
TIGR_CMR|CBU_0255 - symbol:CBU_0255 "ribosomal protein S5... 158 1.3e-11 1
UNIPROTKB|H3BNG3 - symbol:RPS2 "40S ribosomal protein S2"... 148 1.6e-10 1
UNIPROTKB|H0YE27 - symbol:RPS2 "40S ribosomal protein S2"... 125 3.7e-10 2
TIGR_CMR|NSE_0283 - symbol:NSE_0283 "ribosomal protein S5... 137 3.3e-09 1
TIGR_CMR|APH_0297 - symbol:APH_0297 "ribosomal protein S5... 131 1.7e-08 1
TIGR_CMR|ECH_0426 - symbol:ECH_0426 "ribosomal protein S5... 122 1.4e-06 1
>TAIR|locus:2016585 [details] [associations]
symbol:XW6 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0009506 GO:GO:0009507 GO:GO:0006412
Gene3D:3.30.160.20 EMBL:AB077822 EMBL:AC008051 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC082643 GO:GO:0022627
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
EMBL:AB008016 EMBL:AF386958 EMBL:AY072528 EMBL:AY088743
IPI:IPI00521681 PIR:T50673 RefSeq:NP_176134.1 UniGene:At.23094
UniGene:At.23348 UniGene:At.70116 HSSP:P02357
ProteinModelPortal:Q8L8Y0 SMR:Q8L8Y0 STRING:Q8L8Y0
EnsemblPlants:AT1G58380.1 GeneID:842207 KEGG:ath:AT1G58380
TAIR:At1g58380 HOGENOM:HOG000072596 InParanoid:Q8L8Y0 KO:K02981
OMA:FSMAPFQ PhylomeDB:Q8L8Y0 ProtClustDB:CLSN2679407
Genevestigator:Q8L8Y0 GermOnline:AT1G58380 TIGRFAMs:TIGR01020
Uniprot:Q8L8Y0
Length = 284
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 200/233 (85%), Positives = 215/233 (92%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRA
Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRA 111
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PH
Sbjct: 112 GQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPH 171
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK
Sbjct: 172 TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLTPKPINKA-VITE-VDQA 270
ATF+CL KTYGFLTP+FW+ETRF +SPYQE+TD L+ K ++ VITE DQA
Sbjct: 232 ATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVITEGEDQA 284
>TAIR|locus:504956181 [details] [associations]
symbol:AT1G58684 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618 GO:GO:0016020
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036 GO:GO:0022627
EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348 UniGene:At.70116
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 ProtClustDB:CLSN2679407
TIGRFAMs:TIGR01020 EMBL:AY065030 EMBL:AY120723 EMBL:AY133659
EMBL:AK220575 EMBL:BT025727 EMBL:AB008017 IPI:IPI00528173
PIR:T52466 RefSeq:NP_564737.1 RefSeq:NP_564740.1 RefSeq:NP_683443.1
UniGene:At.72872 UniGene:At.74837 ProteinModelPortal:Q93VB8
SMR:Q93VB8 IntAct:Q93VB8 STRING:Q93VB8 EnsemblPlants:AT1G58684.1
EnsemblPlants:AT1G58983.1 EnsemblPlants:AT1G59359.1 GeneID:842222
GeneID:842229 GeneID:842237 KEGG:ath:AT1G58684 KEGG:ath:AT1G58983
KEGG:ath:AT1G59359 TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359
InParanoid:Q93VB8 OMA:NPGVEAP PhylomeDB:Q93VB8
Genevestigator:Q93VB8 GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 200/233 (85%), Positives = 215/233 (92%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRA
Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRA 111
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PH
Sbjct: 112 GQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPH 171
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK
Sbjct: 172 TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLTPKPINKA-VITE-VDQA 270
ATF+CL KTYGFLTP+FW+ETRF +SPYQE+TD L+ K ++ VITE DQA
Sbjct: 232 ATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVITEGEDQA 284
>TAIR|locus:2826988 [details] [associations]
symbol:AT1G58983 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0005618 "cell wall" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618 GO:GO:0016020
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036 GO:GO:0022627
EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348 UniGene:At.70116
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 ProtClustDB:CLSN2679407
TIGRFAMs:TIGR01020 EMBL:AY065030 EMBL:AY120723 EMBL:AY133659
EMBL:AK220575 EMBL:BT025727 EMBL:AB008017 IPI:IPI00528173
PIR:T52466 RefSeq:NP_564737.1 RefSeq:NP_564740.1 RefSeq:NP_683443.1
UniGene:At.72872 UniGene:At.74837 ProteinModelPortal:Q93VB8
SMR:Q93VB8 IntAct:Q93VB8 STRING:Q93VB8 EnsemblPlants:AT1G58684.1
EnsemblPlants:AT1G58983.1 EnsemblPlants:AT1G59359.1 GeneID:842222
GeneID:842229 GeneID:842237 KEGG:ath:AT1G58684 KEGG:ath:AT1G58983
KEGG:ath:AT1G59359 TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359
InParanoid:Q93VB8 OMA:NPGVEAP PhylomeDB:Q93VB8
Genevestigator:Q93VB8 GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 200/233 (85%), Positives = 215/233 (92%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRA
Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRA 111
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PH
Sbjct: 112 GQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPH 171
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK
Sbjct: 172 TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLTPKPINKA-VITE-VDQA 270
ATF+CL KTYGFLTP+FW+ETRF +SPYQE+TD L+ K ++ VITE DQA
Sbjct: 232 ATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVITEGEDQA 284
>TAIR|locus:2826968 [details] [associations]
symbol:AT1G59359 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618
GO:GO:0016020 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036
GO:GO:0022627 EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348
UniGene:At.70116 HSSP:P02357 HOGENOM:HOG000072596 KO:K02981
ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:AY065030
EMBL:AY120723 EMBL:AY133659 EMBL:AK220575 EMBL:BT025727
EMBL:AB008017 IPI:IPI00528173 PIR:T52466 RefSeq:NP_564737.1
RefSeq:NP_564740.1 RefSeq:NP_683443.1 UniGene:At.72872
UniGene:At.74837 ProteinModelPortal:Q93VB8 SMR:Q93VB8 IntAct:Q93VB8
STRING:Q93VB8 EnsemblPlants:AT1G58684.1 EnsemblPlants:AT1G58983.1
EnsemblPlants:AT1G59359.1 GeneID:842222 GeneID:842229 GeneID:842237
KEGG:ath:AT1G58684 KEGG:ath:AT1G58983 KEGG:ath:AT1G59359
TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359 InParanoid:Q93VB8
OMA:NPGVEAP PhylomeDB:Q93VB8 Genevestigator:Q93VB8
GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 200/233 (85%), Positives = 215/233 (92%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRA
Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRA 111
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PH
Sbjct: 112 GQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPH 171
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK
Sbjct: 172 TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 231
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLTPKPINKA-VITE-VDQA 270
ATF+CL KTYGFLTP+FW+ETRF +SPYQE+TD L+ K ++ VITE DQA
Sbjct: 232 ATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVITEGEDQA 284
>TAIR|locus:2103539 [details] [associations]
symbol:AT3G57490 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 EMBL:AL133248
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HSSP:P02357 HOGENOM:HOG000072596
KO:K02981 ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:BT006200
EMBL:AY084252 EMBL:AK228054 IPI:IPI00516307 PIR:T46185
RefSeq:NP_191308.1 UniGene:At.34827 ProteinModelPortal:Q9SCM3
SMR:Q9SCM3 STRING:Q9SCM3 PaxDb:Q9SCM3 PRIDE:Q9SCM3
EnsemblPlants:AT3G57490.1 GeneID:824916 KEGG:ath:AT3G57490
TAIR:At3g57490 InParanoid:Q9SCM3 OMA:GIKDVWT PhylomeDB:Q9SCM3
Genevestigator:Q9SCM3 GermOnline:AT3G57490 Uniprot:Q9SCM3
Length = 276
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 196/231 (84%), Positives = 213/231 (92%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
KWVPVTKLGRLV+EGKI +EQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRA
Sbjct: 44 KWVPVTKLGRLVKEGKITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRA 103
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAF+VVGD++GHVGLGVKCSKEVATAIRGAIILAKLSV+P+RRGYWGNKIG+PH
Sbjct: 104 GQRTRFKAFIVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPH 163
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK
Sbjct: 164 TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 223
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLTPKPINKAVITEVDQA 270
ATF+CL KTYGFLTP+FW+ETRF KSPYQE+TD L P K VD++
Sbjct: 224 ATFDCLQKTYGFLTPEFWKETRFSKSPYQEHTDFLLIPPGVKISEVVVDKS 274
>TAIR|locus:2054406 [details] [associations]
symbol:AT2G41840 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
Gene3D:3.30.160.20 EMBL:AC002339 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:AY048250
EMBL:AY133561 EMBL:Z17622 IPI:IPI00533598 PIR:G84846
RefSeq:NP_181715.1 UniGene:At.12251 UniGene:At.67324
ProteinModelPortal:P49688 SMR:P49688 IntAct:P49688 STRING:P49688
PaxDb:P49688 PRIDE:P49688 EnsemblPlants:AT2G41840.1 GeneID:818784
KEGG:ath:AT2G41840 TAIR:At2g41840 InParanoid:P49688 OMA:QIEQIYL
PhylomeDB:P49688 Genevestigator:P49688 GermOnline:AT2G41840
Uniprot:P49688
Length = 285
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 197/233 (84%), Positives = 212/233 (90%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
KWVPVTKLGRLV G I+ +EQIYLHSLP+KEYQIID LIG LKDEVMKIMPVQKQTRA
Sbjct: 53 KWVPVTKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRA 112
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PH
Sbjct: 113 GQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPH 172
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK
Sbjct: 173 TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 232
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLTPKPINKAVITEV--DQA 270
ATF+CL KTYGFLTP+FW+ETRF +SPYQE+TD L K ++ + V DQA
Sbjct: 233 ATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLASKALSTSKPDPVVEDQA 285
>FB|FBgn0004867 [details] [associations]
symbol:RpS2 "Ribosomal protein S2" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0007275 GO:GO:0030154
EMBL:AE014134 GO:GO:0005811 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0048477 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
OMA:GIKDVWT CTD:6187 GeneTree:ENSGT00390000001433 EMBL:U01334
EMBL:U01335 EMBL:X69120 EMBL:AY094799 PIR:S30395 RefSeq:NP_476874.1
UniGene:Dm.3451 ProteinModelPortal:P31009 SMR:P31009 DIP:DIP-18767N
IntAct:P31009 MINT:MINT-769241 STRING:P31009 PaxDb:P31009
PRIDE:P31009 EnsemblMetazoa:FBtr0079905 EnsemblMetazoa:FBtr0330682
GeneID:34309 KEGG:dme:Dmel_CG5920 FlyBase:FBgn0004867
InParanoid:P31009 OrthoDB:EOG4TX97W PhylomeDB:P31009
GenomeRNAi:34309 NextBio:787861 Bgee:P31009 GermOnline:CG5920
Uniprot:P31009
Length = 267
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 165/220 (75%), Positives = 193/220 (87%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+WVPVTKLGRLVREGKI+SLE+IYL+SLPIKE++IID +G LKDEV+KIMPVQKQTRA
Sbjct: 42 EWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRA 101
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GH+GLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PH
Sbjct: 102 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPH 161
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTGKCGSV+VR++PAPRG GIV+A VPKK+L AGI+D +TS+RGST TLGNF K
Sbjct: 162 TVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAK 221
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLT-PKP 258
AT+ + KTY +LTPD W+E +PYQ Y+D L+ P P
Sbjct: 222 ATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLSKPTP 261
>ZFIN|ZDB-GENE-040426-2454 [details] [associations]
symbol:rps2 "ribosomal protein S2" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 ZFIN:ZDB-GENE-040426-2454
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
TIGRFAMs:TIGR01020 OMA:GIKDVWT CTD:6187
GeneTree:ENSGT00390000001433 HOVERGEN:HBG000437 OrthoDB:EOG4SXND8
EMBL:CR392027 EMBL:BC067645 IPI:IPI00493658 RefSeq:NP_998444.1
UniGene:Dr.32854 SMR:Q6NWC3 STRING:Q6NWC3
Ensembl:ENSDART00000110842 Ensembl:ENSDART00000138107 GeneID:406565
KEGG:dre:406565 InParanoid:Q6NWC3 NextBio:20818125 Uniprot:Q6NWC3
Length = 280
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 166/215 (77%), Positives = 191/215 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+WVPVTKLGRLV++ KI+SLE+IYL+SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 45 EWVPVTKLGRLVKDMKIKSLEEIYLYSLPIKESEIIDFFLGSALKDEVLKIMPVQKQTRA 104
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS+IPVRRGYWGNKIG+PH
Sbjct: 105 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPH 164
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 165 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 224
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 225 ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 259
>UNIPROTKB|E1C4M0 [details] [associations]
symbol:E1C4M0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0017134 "fibroblast growth factor binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020 OMA:GIKDVWT
GeneTree:ENSGT00390000001433 EMBL:AADN02023671 IPI:IPI00572788
PRIDE:E1C4M0 Ensembl:ENSGALT00000008816 Uniprot:E1C4M0
Length = 286
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 164/215 (76%), Positives = 190/215 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 52 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGSSLKDEVLKIMPVQKQTRA 111
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 112 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 171
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 172 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 231
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 232 ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 266
>UNIPROTKB|E2QWY6 [details] [associations]
symbol:LOC608162 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020 OMA:GIKDVWT
GeneTree:ENSGT00390000001433 EMBL:AAEX03004635
Ensembl:ENSCAFT00000030964 Uniprot:E2QWY6
Length = 293
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 164/215 (76%), Positives = 190/215 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 178
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 179 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 239 ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 273
>RGD|2323085 [details] [associations]
symbol:LOC100359960 "ribosomal protein S2-like" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 EMBL:CH473948 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
Ensembl:ENSRNOT00000035386 Uniprot:G3V957
Length = 267
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 164/215 (76%), Positives = 190/215 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 33 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 92
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 93 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 152
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 153 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 212
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 213 ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 247
>RGD|619887 [details] [associations]
symbol:Rps2 "ribosomal protein S2" species:10116 "Rattus
norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IMP] [GO:0001731 "formation of translation preinitiation
complex" evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO;IMP]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0017134 "fibroblast
growth factor binding" evidence=ISO] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0032403 "protein complex binding"
evidence=IMP] [GO:0071353 "cellular response to interleukin-4"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 RGD:619887 GO:GO:0032403 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000028 GO:GO:0001731
GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
CTD:6187 GeneTree:ENSGT00390000001433 HOVERGEN:HBG000437
EMBL:X57432 EMBL:BC098726 IPI:IPI00392390 PIR:S18828
RefSeq:NP_114026.3 UniGene:Rn.2115 UniGene:Rn.220062
ProteinModelPortal:P27952 SMR:P27952 IntAct:P27952 STRING:P27952
PhosphoSite:P27952 PRIDE:P27952 Ensembl:ENSRNOT00000019508
GeneID:83789 KEGG:rno:83789 UCSC:RGD:619887 InParanoid:P27952
OMA:DSEGHIG NextBio:616365 ArrayExpress:P27952
Genevestigator:P27952 GermOnline:ENSRNOG00000014179 Uniprot:P27952
Length = 293
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 164/215 (76%), Positives = 190/215 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 178
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 179 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 239 ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 273
>UNIPROTKB|E9PU05 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 IPI:IPI00781732
Ensembl:ENSRNOT00000002656 ArrayExpress:E9PU05 Uniprot:E9PU05
Length = 259
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 164/215 (76%), Positives = 190/215 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 25 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 84
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 85 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 144
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 145 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 204
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 205 ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 239
>UNIPROTKB|O18789 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9913 "Bos
taurus" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0017134 "fibroblast growth factor binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:GIKDVWT
EMBL:BC102227 EMBL:AF013215 IPI:IPI00695732 RefSeq:NP_001028785.1
UniGene:Bt.48814 ProteinModelPortal:O18789 SMR:O18789 STRING:O18789
PRIDE:O18789 Ensembl:ENSBTAT00000012544 GeneID:286867
KEGG:bta:286867 CTD:6187 GeneTree:ENSGT00390000001433
HOVERGEN:HBG000437 InParanoid:O18789 OrthoDB:EOG4SXND8
NextBio:20806516 Uniprot:O18789
Length = 293
Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
Identities = 164/215 (76%), Positives = 190/215 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 178
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 179 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 239 ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 273
>UNIPROTKB|P15880 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0017134 "fibroblast growth factor binding" evidence=IPI]
[GO:0006412 "translation" evidence=IC;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 Reactome:REACT_116125 GO:GO:0005654
GO:GO:0000184 GO:GO:0006413 Gene3D:3.30.160.20 GO:GO:0003723
EMBL:CH471112 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006415 GO:GO:0006414
GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0019083
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:GIKDVWT
CTD:6187 HOVERGEN:HBG000437 OrthoDB:EOG4SXND8 EMBL:X17206
EMBL:AK312173 EMBL:BC001795 EMBL:BC006559 EMBL:BC008862
EMBL:BC010165 EMBL:BC012354 EMBL:BC016178 EMBL:BC016951
EMBL:BC018993 EMBL:BC021545 EMBL:BC023541 EMBL:BC025677
EMBL:BC066321 EMBL:BC068051 EMBL:BC071922 EMBL:BC071923
EMBL:BC071924 EMBL:BC073966 EMBL:BC075830 EMBL:BC103756
EMBL:BC105985 IPI:IPI00013485 PIR:S08228 RefSeq:NP_002943.2
UniGene:Hs.356366 UniGene:Hs.381079 UniGene:Hs.498569
UniGene:Hs.506997 ProteinModelPortal:P15880 SMR:P15880
IntAct:P15880 MINT:MINT-3008399 STRING:P15880 PhosphoSite:P15880
DMDM:1710756 PaxDb:P15880 PRIDE:P15880 DNASU:6187
Ensembl:ENST00000343262 GeneID:6187 KEGG:hsa:6187 UCSC:uc002cnn.2
GeneCards:GC16M002012 H-InvDB:HIX0029256 H-InvDB:HIX0039223
H-InvDB:HIX0202579 HGNC:HGNC:10404 MIM:603624 neXtProt:NX_P15880
PharmGKB:PA34806 InParanoid:P15880 PhylomeDB:P15880 GenomeRNAi:6187
NextBio:24025 ArrayExpress:P15880 Bgee:P15880 CleanEx:HS_RPS2
Genevestigator:P15880 GermOnline:ENSG00000140988 Uniprot:P15880
Length = 293
Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
Identities = 164/215 (76%), Positives = 190/215 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 178
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 179 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 239 ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 273
>UNIPROTKB|E9PTY3 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
IPI:IPI00951764 Ensembl:ENSRNOT00000067137 ArrayExpress:E9PTY3
Uniprot:E9PTY3
Length = 297
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 164/219 (74%), Positives = 190/219 (86%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 178
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 179 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 238
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQ----EYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQ E+TD L
Sbjct: 239 ATFDAISKTYSYLTPDLWKETVFTKSPYQALGSEFTDHL 277
>DICTYBASE|DDB_G0293742 [details] [associations]
symbol:rps2 "ribosomal protein S2" species:44689
"Dictyostelium discoideum" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
dictyBase:DDB_G0293742 GenomeReviews:CM000155_GR GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AAFI02000219 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
EMBL:X56297 PIR:S22297 RefSeq:XP_628967.1 ProteinModelPortal:P27685
STRING:P27685 PRIDE:P27685 EnsemblProtists:DDB0215391
GeneID:8629395 KEGG:ddi:DDB_G0293742 OMA:GLVENIH
ProtClustDB:PTZ00070 Uniprot:P27685
Length = 265
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 160/217 (73%), Positives = 186/217 (85%)
Query: 41 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAG 100
W PVTKLGRLV G + ++ +IYL SLPIKEYQIID + LKDEVMKI+PVQKQTRAG
Sbjct: 49 WTPVTKLGRLVALGLVENIHEIYLFSLPIKEYQIIDKFLN--LKDEVMKIVPVQKQTRAG 106
Query: 101 QRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHT 160
QRTRFKAFVVVGD +GHVGLGVKC+KEVATAI GAI+ AKLSVIPVRRGYWGNK+G PHT
Sbjct: 107 QRTRFKAFVVVGDHNGHVGLGVKCAKEVATAISGAIVAAKLSVIPVRRGYWGNKLGAPHT 166
Query: 161 VPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKA 220
VP KVTGKCGSV VR+VPAPRG GIVAARVPKK+LQ+AG+DDV+TSSRG T+T+GNFV A
Sbjct: 167 VPTKVTGKCGSVAVRLVPAPRGTGIVAARVPKKLLQYAGVDDVYTSSRGKTRTMGNFVMA 226
Query: 221 TFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLTPK 257
TF + KT+ +LTPD WRE + +K+PYQE++ L+ K
Sbjct: 227 TFFAITKTFAYLTPDLWREVKLIKTPYQEHSAKLSEK 263
>RGD|1588815 [details] [associations]
symbol:LOC688473 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1588815 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 IPI:IPI00958659
PRIDE:D3ZIY7 Ensembl:ENSRNOT00000060074 UCSC:RGD:1588815
OMA:CAGQRIR Uniprot:D3ZIY7
Length = 269
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 157/215 (73%), Positives = 183/215 (85%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLG LV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQ A
Sbjct: 35 EWIPVTKLGHLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQILA 94
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PV RGYWGN IG+PH
Sbjct: 95 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVWRGYWGNTIGKPH 154
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG CGSV +R++P PRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 155 TVPCKVTGHCGSVLMRLIPTPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 214
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 215 ATFDPISKTYSYLTPDLWKETVFTKSPYQEFTDHL 249
>RGD|1562399 [details] [associations]
symbol:RGD1562399 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1562399 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 IPI:IPI00358026
RefSeq:XP_001064690.1 RefSeq:XP_217412.3 Ensembl:ENSRNOT00000058491
GeneID:301438 KEGG:rno:301438 UCSC:RGD:1562399 CTD:301438
NextBio:648730 Uniprot:D3ZAS1
Length = 291
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 158/215 (73%), Positives = 185/215 (86%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLP+KE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPLKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKA+V +GD GHVGLGVKCSKEVATAI+GAIILAKLS PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAYVAIGDYKGHVGLGVKCSKEVATAIQGAIILAKLS--PVRRGYWGNKIGKPH 176
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TV CKVTG+CGSV V ++PAPRG GIV+A VPKK+L AGI+D +TS+RG T TLGNF K
Sbjct: 177 TVRCKVTGRCGSVLVDLIPAPRGTGIVSALVPKKLLMMAGIEDCYTSARGCTATLGNFAK 236
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 237 ATFDAISKTYNYLTPDLWKETVFTKSPYQEFTDHL 271
>MGI|MGI:3643826 [details] [associations]
symbol:Gm8225 "predicted gene 8225" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005840 "ribosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 MGI:MGI:3643826 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
HOGENOM:HOG000072596 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 EMBL:AC122252
IPI:IPI00875177 ProteinModelPortal:D3Z536 SMR:D3Z536 PRIDE:D3Z536
Ensembl:ENSMUST00000090257 OMA:LMASIDD Bgee:D3Z536 Uniprot:D3Z536
Length = 292
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 159/215 (73%), Positives = 183/215 (85%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +I D +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEITDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFVV+GD DGHV LGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAFVVIGDYDGHVDLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 178
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L A IDD +TS+RG T TL NF K
Sbjct: 179 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLM-ASIDDCYTSARGCTATLSNFAK 237
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF KT +LTPD W+ T F +SPYQE+TD L
Sbjct: 238 ATFYATSKTCSYLTPDLWKVTVFTQSPYQEFTDHL 272
>POMBASE|SPCC576.08c [details] [associations]
symbol:rps2 "40S ribosomal protein S2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 PomBase:SPCC576.08c EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 GO:GO:0002181 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0032040 GO:GO:0022627
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:NPGVEAP
PIR:T41418 RefSeq:NP_588435.1 ProteinModelPortal:O74892 SMR:O74892
IntAct:O74892 STRING:O74892 PRIDE:O74892 EnsemblFungi:SPCC576.08c.1
GeneID:2539067 KEGG:spo:SPCC576.08c OrthoDB:EOG4T1MWN
NextBio:20800240 Uniprot:O74892
Length = 253
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 153/215 (71%), Positives = 184/215 (85%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+WVPVTKLGRLV+ GKI+S+E+IYL+SLPIKEYQI+D + +L DEVMK++PVQKQTRA
Sbjct: 33 EWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFLP-RLNDEVMKVVPVQKQTRA 91
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFVV+GD+DGHVGLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G PH
Sbjct: 92 GQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPH 151
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVP KV+GKCGSVTVR+VPAPRGAG+VAA V K+ LQ AGI+D +T SRGSTKTLGNFVK
Sbjct: 152 TVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNFVK 211
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
A F TYG LTP+ W E F ++P +EY D+L
Sbjct: 212 AAFAAASLTYGILTPNLWAERPFGQTPIEEYADIL 246
>GENEDB_PFALCIPARUM|PF14_0448 [details] [associations]
symbol:PF14_0448 "ribosomal protein S2,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 PANTHER:PTHR13718
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
ProtClustDB:PTZ00070 OMA:DSEGHIG RefSeq:XP_001348622.1
ProteinModelPortal:Q8IL02 SMR:Q8IL02 MINT:MINT-1571495 PRIDE:Q8IL02
EnsemblProtists:PF14_0448:mRNA GeneID:812030 KEGG:pfa:PF14_0448
EuPathDB:PlasmoDB:PF3D7_1447000 Uniprot:Q8IL02
Length = 272
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 159/219 (72%), Positives = 180/219 (82%)
Query: 41 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLI-----GHKLKDEVMKIMPVQK 95
WVPVTKLGRLV+EGKI S+E+IYLHSLPIKEYQIID H LKD+V+KIMPVQK
Sbjct: 41 WVPVTKLGRLVKEGKIVSIEEIYLHSLPIKEYQIIDYFFQPNECSHPLKDDVVKIMPVQK 100
Query: 96 QTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 155
QTRAGQRTRFKAFV +GD +GH GLGVKC+KEVATAIRGAII AKLS+IPVRRGYWGNKI
Sbjct: 101 QTRAGQRTRFKAFVAIGDGNGHCGLGVKCAKEVATAIRGAIISAKLSLIPVRRGYWGNKI 160
Query: 156 GRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 215
G PHTVP KV+GKCGSV +R+VPAPRG IV A KK+L FAGI D F+SS G TKT G
Sbjct: 161 GDPHTVPMKVSGKCGSVRIRLVPAPRGTQIVGAPTTKKMLNFAGIKDCFSSSCGKTKTKG 220
Query: 216 NFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
NF++A F L KTYG+LTPD W+ T F KSPY+E++D L
Sbjct: 221 NFLRAIFNALSKTYGYLTPDLWKVTNFDKSPYEEWSDFL 259
>UNIPROTKB|Q8IL02 [details] [associations]
symbol:PF14_0448 "40S ribosomal protein S2, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
EMBL:AE014187 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 PANTHER:PTHR13718
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
ProtClustDB:PTZ00070 OMA:DSEGHIG RefSeq:XP_001348622.1
ProteinModelPortal:Q8IL02 SMR:Q8IL02 MINT:MINT-1571495 PRIDE:Q8IL02
EnsemblProtists:PF14_0448:mRNA GeneID:812030 KEGG:pfa:PF14_0448
EuPathDB:PlasmoDB:PF3D7_1447000 Uniprot:Q8IL02
Length = 272
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 159/219 (72%), Positives = 180/219 (82%)
Query: 41 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLI-----GHKLKDEVMKIMPVQK 95
WVPVTKLGRLV+EGKI S+E+IYLHSLPIKEYQIID H LKD+V+KIMPVQK
Sbjct: 41 WVPVTKLGRLVKEGKIVSIEEIYLHSLPIKEYQIIDYFFQPNECSHPLKDDVVKIMPVQK 100
Query: 96 QTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 155
QTRAGQRTRFKAFV +GD +GH GLGVKC+KEVATAIRGAII AKLS+IPVRRGYWGNKI
Sbjct: 101 QTRAGQRTRFKAFVAIGDGNGHCGLGVKCAKEVATAIRGAIISAKLSLIPVRRGYWGNKI 160
Query: 156 GRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 215
G PHTVP KV+GKCGSV +R+VPAPRG IV A KK+L FAGI D F+SS G TKT G
Sbjct: 161 GDPHTVPMKVSGKCGSVRIRLVPAPRGTQIVGAPTTKKMLNFAGIKDCFSSSCGKTKTKG 220
Query: 216 NFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
NF++A F L KTYG+LTPD W+ T F KSPY+E++D L
Sbjct: 221 NFLRAIFNALSKTYGYLTPDLWKVTNFDKSPYEEWSDFL 259
>WB|WBGene00004471 [details] [associations]
symbol:rps-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0000003
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 OMA:FSMAPFQ TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 EMBL:FO080908 PIR:T34184
RefSeq:NP_501322.1 ProteinModelPortal:P51403 SMR:P51403
DIP:DIP-25206N IntAct:P51403 MINT:MINT-228946 STRING:P51403
PaxDb:P51403 PRIDE:P51403 EnsemblMetazoa:C49H3.11.1
EnsemblMetazoa:C49H3.11.2 EnsemblMetazoa:C49H3.11.3 GeneID:177583
KEGG:cel:CELE_C49H3.11 UCSC:C49H3.11.1 CTD:177583 WormBase:C49H3.11
InParanoid:P51403 NextBio:897468 Uniprot:P51403
Length = 272
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 152/215 (70%), Positives = 180/215 (83%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W PVTKLGRLV+E KI +LE+IYL+SLPIKE++IID L + LKDEV+KI PVQKQT A
Sbjct: 56 EWTPVTKLGRLVKEKKITTLEEIYLNSLPIKEFEIIDALCSN-LKDEVLKISPVQKQTTA 114
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD GHVGLGVKCSKEVATAIRGAI+ AKL+V+PVRRGYWGNKIG PH
Sbjct: 115 GQRTRFKAFVAIGDHAGHVGLGVKCSKEVATAIRGAIVAAKLAVVPVRRGYWGNKIGLPH 174
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTGKC SV VR++PAPRG GIV+A VPKK+L AGI+D +T+++GST TLGNF K
Sbjct: 175 TVPCKVTGKCASVMVRLIPAPRGTGIVSAPVPKKLLHMAGIEDCYTAAKGSTATLGNFAK 234
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
AT+ L +TY +LTPD W+E KSPYQ + + L
Sbjct: 235 ATYAALQRTYSYLTPDLWKEEALEKSPYQRHHEYL 269
>UNIPROTKB|F1LUI9 [details] [associations]
symbol:F1LUI9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00564910 Ensembl:ENSRNOT00000014416 Uniprot:F1LUI9
Length = 287
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/215 (73%), Positives = 182/215 (84%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLG LV++ KI+SLE IYL SLPIKE +IID L G LKDEV+KIMPVQKQTRA
Sbjct: 58 EWIPVTKLGCLVKDMKIKSLE-IYLFSLPIKESEIIDFL-GASLKDEVLKIMPVQKQTRA 115
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQ+TRFKAFV VGD +GHVGLG KCSKEVATAIRGAIILAKLS++PV RGYWGNKIG+PH
Sbjct: 116 GQQTRFKAFVAVGDYNGHVGLG-KCSKEVATAIRGAIILAKLSIVPVWRGYWGNKIGKPH 174
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++ P G GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 175 TVPCKVTGRCGSVLVRLISTP-GTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 233
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + K Y +LTPD W+ET F KSPYQE+TD L
Sbjct: 234 ATFDAISKNYSYLTPDLWKETVFTKSPYQEFTDHL 268
>UNIPROTKB|F1LZV8 [details] [associations]
symbol:F1LZV8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00567374 Ensembl:ENSRNOT00000045325 OMA:THTRVSI
Uniprot:F1LZV8
Length = 287
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/215 (73%), Positives = 182/215 (84%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLG LV++ KI+SLE IYL SLPIKE +IID L G LKDEV+KIMPVQKQTRA
Sbjct: 58 EWIPVTKLGCLVKDMKIKSLE-IYLFSLPIKESEIIDFL-GASLKDEVLKIMPVQKQTRA 115
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQ+TRFKAFV VGD +GHVGLG KCSKEVATAIRGAIILAKLS++PV RGYWGNKIG+PH
Sbjct: 116 GQQTRFKAFVAVGDYNGHVGLG-KCSKEVATAIRGAIILAKLSIVPVWRGYWGNKIGKPH 174
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG+CGSV VR++ P G GIV+A VPKK+L AGIDD +TS+RG T TLGNF K
Sbjct: 175 TVPCKVTGRCGSVLVRLISTP-GTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 233
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + K Y +LTPD W+ET F KSPYQE+TD L
Sbjct: 234 ATFDAISKNYSYLTPDLWKETVFTKSPYQEFTDHL 268
>UNIPROTKB|J9P0D3 [details] [associations]
symbol:J9P0D3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:AAEX03026702
Ensembl:ENSCAFT00000027736 OMA:DKEWISI Uniprot:J9P0D3
Length = 265
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 147/215 (68%), Positives = 180/215 (83%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+ +TKLGR+V++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQT A
Sbjct: 32 EWISITKLGRVVKDMKIKSLEEIYLFSLPIKESKIIDFFLGASLKDEVLKIMPVQKQTHA 91
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQ+TRFKAFV +GD +GH GLG+KCSKE+ATAI GAIILAKLS++ VR GYWGNKIG+PH
Sbjct: 92 GQQTRFKAFVAIGDYNGHGGLGIKCSKEIATAIHGAIILAKLSIVLVRGGYWGNKIGKPH 151
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
T PCKVTG+CG V V ++PAPRG GIV+A VP+K+L AGID+ +TS+RG T TLGNF K
Sbjct: 152 T-PCKVTGRCGFVLVHLIPAPRGTGIVSAPVPEKLLMMAGIDNCYTSARGCTATLGNFAK 210
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +L PD W+ET F KSPYQE+TD L
Sbjct: 211 ATFDAISKTYSYLIPDLWKETVFTKSPYQEFTDHL 245
>UNIPROTKB|G4MPT3 [details] [associations]
symbol:MGG_16248 "30S ribosomal protein S5" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 EMBL:CM001231 GO:GO:0043581
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 RefSeq:XP_003709842.1
ProteinModelPortal:G4MPT3 SMR:G4MPT3 EnsemblFungi:MGG_16248T0
GeneID:12985269 KEGG:mgr:MGG_16248 Uniprot:G4MPT3
Length = 265
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 147/215 (68%), Positives = 181/215 (84%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W PVTKLGRLV+ GKI+S+E+IYLHSLPIKEYQI+D + KLKDEVMKI PVQKQTRA
Sbjct: 46 EWQPVTKLGRLVKAGKIKSMEEIYLHSLPIKEYQIVDFFLP-KLKDEVMKIKPVQKQTRA 104
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKA V++GD++GHVGLG+K SKEVATAIR AII+AKLSVIPVRRGYWG +G PH
Sbjct: 105 GQRTRFKAIVIIGDSEGHVGLGIKTSKEVATAIRAAIIIAKLSVIPVRRGYWGTNLGTPH 164
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
++P K +GKCGSVTVR++PAPRG +VA+ K++LQ AGI+D +TSS GSTKTL N +K
Sbjct: 165 SLPVKESGKCGSVTVRLIPAPRGTALVASPAVKRLLQLAGIEDAYTSSSGSTKTLENTLK 224
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF + TYGFLTP+ W+ET+ ++SP +E+ D L
Sbjct: 225 ATFSAVSNTYGFLTPNLWKETKLIRSPLEEFADTL 259
>ASPGD|ASPL0000036430 [details] [associations]
symbol:AN3413 species:162425 "Emericella nidulans"
[GO:0006407 "rRNA export from nucleus" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IEA]
[GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
EMBL:BN001306 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000055 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
TIGRFAMs:TIGR01020 OMA:DSEGHIG OrthoDB:EOG4T1MWN RefSeq:XP_661017.1
ProteinModelPortal:Q5B7R7 SMR:Q5B7R7 STRING:Q5B7R7
EnsemblFungi:CADANIAT00009625 GeneID:2874304 KEGG:ani:AN3413.2
Uniprot:Q5B7R7
Length = 259
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 143/215 (66%), Positives = 180/215 (83%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W PVTKLGRLV+ GKI S+EQIYLHSLP+KEYQI+D + KLKDEVMKI PVQKQTRA
Sbjct: 40 EWQPVTKLGRLVKAGKITSMEQIYLHSLPVKEYQIVDFFLP-KLKDEVMKIKPVQKQTRA 98
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKA VV+GD++GH+GLG+K SKEVATAIR AII+AKL+V+PVRRGYWG +G PH
Sbjct: 99 GQRTRFKAVVVIGDSEGHIGLGIKTSKEVATAIRAAIIIAKLAVLPVRRGYWGTNLGEPH 158
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
++P K + KCGSV+VR++PAPRG G+VA+ K++LQ AG+ D +TSS GSTKTL N +K
Sbjct: 159 SLPVKQSAKCGSVSVRLIPAPRGTGLVASPAVKRLLQLAGVQDAYTSSSGSTKTLENTLK 218
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF ++ TYGFLTP+ W ET+ +SP +E++D+L
Sbjct: 219 ATFLAVVNTYGFLTPNLWTETKLTRSPLEEFSDVL 253
>RGD|1560789 [details] [associations]
symbol:RGD1560789 "similar to ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1560789 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 EMBL:AC096051
IPI:IPI00201692 Ensembl:ENSRNOT00000028014 Uniprot:D4A577
Length = 272
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 148/211 (70%), Positives = 171/211 (81%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE IID + LKDE +KIM VQ QT
Sbjct: 50 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESVIIDFFLCASLKDEALKIMLVQTQTWT 109
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV VGD +GHVGLGVKCSKEV TAIRGAIILAKLS++PVRRGY GNKI +PH
Sbjct: 110 GQRTRFKAFVAVGDYNGHVGLGVKCSKEVTTAIRGAIILAKLSIVPVRRGYSGNKIDKPH 169
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG CGSV V ++P PRG GIV+A VPKK+L A IDD +TS+R T TLGNF K
Sbjct: 170 TVPCKVTGHCGSVLVCLIPTPRGTGIVSAPVPKKLLMMASIDDCYTSARVCTATLGNFAK 229
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEY 250
ATF+ + KTY +LTPD W+ET F SPYQE+
Sbjct: 230 ATFDAISKTYSYLTPDLWKETVFTWSPYQEF 260
>CGD|CAL0004119 [details] [associations]
symbol:RPS21 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] [GO:0070181 "SSU rRNA
binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006407 "rRNA export from nucleus"
evidence=IEA] [GO:0045903 "positive regulation of translational
fidelity" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 CGD:CAL0004119 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 EMBL:AACQ01000045
EMBL:AACQ01000042 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
RefSeq:XP_718157.1 RefSeq:XP_718427.1 STRING:Q5A900 GeneID:3639967
GeneID:3640242 KEGG:cal:CaO19.10845 KEGG:cal:CaO19.3334
Uniprot:Q5A900
Length = 249
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 138/212 (65%), Positives = 174/212 (82%)
Query: 41 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAG 100
W PVTKLGRLV+ GKI S+EQIYLHSLP+KEYQIID L+ LKD+VMKI VQKQTRAG
Sbjct: 30 WTPVTKLGRLVKAGKITSVEQIYLHSLPVKEYQIIDLLLPD-LKDDVMKIRSVQKQTRAG 88
Query: 101 QRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHT 160
QRTR KA VV+GD++GHVGLG+K +KEVA+AI+ AI++AKLS+IP+RRGYWG+ +G+PH+
Sbjct: 89 QRTRMKAVVVIGDSNGHVGLGIKTAKEVASAIKAAIVIAKLSIIPIRRGYWGSNLGQPHS 148
Query: 161 VPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKA 220
+PCKVTGKCGSV VR++PAPRG GIVA+ V K+++Q AG++DV+TSS GST+T N +KA
Sbjct: 149 LPCKVTGKCGSVAVRLIPAPRGKGIVASPVVKRLMQLAGVEDVYTSSSGSTRTTENTLKA 208
Query: 221 TFECLLKTYGFLTPDFWRETRFVKSPYQEYTD 252
F + TY FLTP+ W ET SP + Y +
Sbjct: 209 AFAAIGNTYSFLTPNLWAETPLAASPLEVYAE 240
>UNIPROTKB|E9PSQ6 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
IPI:IPI00568581 Ensembl:ENSRNOT00000048967 ArrayExpress:E9PSQ6
Uniprot:E9PSQ6
Length = 221
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 140/180 (77%), Positives = 160/180 (88%)
Query: 55 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDT 114
KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 61
Query: 115 DGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTV 174
+GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV V
Sbjct: 62 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLV 121
Query: 175 RMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTP 234
R++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KATF+ + KTY +LTP
Sbjct: 122 RLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTP 181
>UNIPROTKB|E9PT76 [details] [associations]
symbol:E9PT76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433
IPI:IPI00562369 Ensembl:ENSRNOT00000043480 OMA:DSKEWIP
Uniprot:E9PT76
Length = 223
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 140/182 (76%), Positives = 160/182 (87%)
Query: 55 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDT 114
KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 61
Query: 115 DGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKV--TGKCGSV 172
+GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKV TG+CGSV
Sbjct: 62 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVAVTGRCGSV 121
Query: 173 TVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFL 232
VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KATF+ + KTY +L
Sbjct: 122 LVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYL 181
Query: 233 TP 234
TP
Sbjct: 182 TP 183
>SGD|S000003091 [details] [associations]
symbol:RPS2 "Protein component of the small (40S) subunit"
species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IMP]
[GO:0070181 "SSU rRNA binding" evidence=IDA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0006407 "rRNA export
from nucleus" evidence=IMP] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 SGD:S000003091 InterPro:IPR014720 GO:GO:0005730
EMBL:BK006941 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0032040 GO:GO:0070181
GO:GO:0045903 PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
PDBsum:3U5C PDBsum:3U5G EMBL:X94106 GO:GO:0006407 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585 PDB:1K5X
PDBsum:1K5X HOGENOM:HOG000072596 KO:K02981 OMA:FSMAPFQ
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 OrthoDB:EOG4T1MWN
EMBL:M59375 EMBL:Z72645 EMBL:AY557815 PIR:A36363 RefSeq:NP_011392.1
ProteinModelPortal:P25443 SMR:P25443 IntAct:P25443 STRING:P25443
PaxDb:P25443 PeptideAtlas:P25443 EnsemblFungi:YGL123W GeneID:852754
KEGG:sce:YGL123W EvolutionaryTrace:P25443 NextBio:972192
Genevestigator:P25443 GermOnline:YGL123W Uniprot:P25443
Length = 254
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 139/212 (65%), Positives = 171/212 (80%)
Query: 41 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAG 100
WVPVTKLGRLV+ GKI ++E+I+LHSLP+KE+QIIDTL+ L+DEVM I PVQKQTRAG
Sbjct: 35 WVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLLPG-LQDEVMNIKPVQKQTRAG 93
Query: 101 QRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHT 160
QRTRFKA VVVGD++GHVGLG+K +KEVA AIR II+AKLSVIP+RRGYWG +G+PH+
Sbjct: 94 QRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHS 153
Query: 161 VPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKA 220
+ K TGKCGSVTVR++PAPRG+GIVA+ KK+LQ AG++DV+T S G T+TL N +KA
Sbjct: 154 LATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKA 213
Query: 221 TFECLLKTYGFLTPDFWRETRFVKSPYQEYTD 252
F + TYGFLTP+ W E SP Y+D
Sbjct: 214 AFVAIGNTYGFLTPNLWAEQPLPVSPLDIYSD 245
>UNIPROTKB|F1M5X9 [details] [associations]
symbol:F1M5X9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00188066 PRIDE:F1M5X9 Ensembl:ENSRNOT00000007876
Uniprot:F1M5X9
Length = 250
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 143/216 (66%), Positives = 173/216 (80%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLG LV++ K++SLE+I+L SL IKE +I +G LKDEV+KIMPVQKQTRA
Sbjct: 40 EWIPVTKLGCLVKDMKVKSLEEIFLFSLSIKESEITYFFLGASLKDEVLKIMPVQKQTRA 99
Query: 100 GQRTRFK-AFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRP 158
GQ+TRFK FV +GD +GHVGLGVKCSKEVAT I G IILAKLS++PVR+GYWGNK P
Sbjct: 100 GQQTRFKPGFVAIGDYNGHVGLGVKCSKEVAT-ILGVIILAKLSIVPVRKGYWGNK---P 155
Query: 159 HTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFV 218
H VPCKVTG+C S V ++PAPRG GIV+A VPKK+L AGI+D +TS+RG TLGNF
Sbjct: 156 H-VPCKVTGRCASELVCLIPAPRGTGIVSAPVPKKLLMMAGINDCYTSARGCIATLGNFA 214
Query: 219 KATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
KATF+ + KTY +LTPD W+ET F K PYQE+TD L
Sbjct: 215 KATFDAISKTYSYLTPDLWKETVFTKFPYQEFTDHL 250
>UNIPROTKB|I3LJ87 [details] [associations]
symbol:RPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433
Ensembl:ENSSSCT00000024892 OMA:DSKEWAP Uniprot:I3LJ87
Length = 184
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 129/164 (78%), Positives = 146/164 (89%)
Query: 91 MPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY 150
MPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGY
Sbjct: 1 MPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGY 60
Query: 151 WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGS 210
WGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG
Sbjct: 61 WGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGC 120
Query: 211 TKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
T TLGNF KATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 121 TATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 164
>UNIPROTKB|F1LVB4 [details] [associations]
symbol:F1LVB4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 IPI:IPI00569467 PRIDE:F1LVB4
Ensembl:ENSRNOT00000035389 Uniprot:F1LVB4
Length = 271
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 142/215 (66%), Positives = 165/215 (76%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVT LGRLV++ KI+SLE+IYL LPIKE +IID +G L DEV+KI+ KQT A
Sbjct: 41 EWIPVTTLGRLVKDMKIKSLEEIYLFYLPIKESEIIDFFLGASLNDEVLKIIQC-KQTWA 99
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRT K+FV +GD +GHVGLGVKC KEVATAIRGAIILA LSVIPV+RGY GNKIG+PH
Sbjct: 100 GQRT--KSFVAIGDYNGHVGLGVKCFKEVATAIRGAIILATLSVIPVQRGYLGNKIGKPH 157
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
TVPCKVTG C SV V ++P PRG GIV+A VPKK A IDD +TS+RG T TLGNF K
Sbjct: 158 TVPCKVTGCCDSVLVCLIPTPRGTGIVSAPVPKKFPIMACIDDCYTSARGCTATLGNFAK 217
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ KT PD W+ET F K PYQE+TD L
Sbjct: 218 ATFDAFSKTCSCGDPDLWKET-FTKYPYQEFTDHL 251
>UNIPROTKB|E9PMM9 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 IPI:IPI00985370
ProteinModelPortal:E9PMM9 SMR:E9PMM9 PRIDE:E9PMM9
Ensembl:ENST00000527302 ArrayExpress:E9PMM9 Bgee:E9PMM9
Uniprot:E9PMM9
Length = 218
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 127/160 (79%), Positives = 146/160 (91%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 178
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAG 199
TVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AG
Sbjct: 179 TVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAG 218
>UNIPROTKB|H0YEN5 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
PANTHER:PTHR13718 TIGRFAMs:TIGR01020 HGNC:HGNC:10404 PRIDE:H0YEN5
Ensembl:ENST00000533186 Bgee:H0YEN5 Uniprot:H0YEN5
Length = 195
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 121/178 (67%), Positives = 143/178 (80%)
Query: 77 TLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAI 136
T +G +KD MKI +++ KAFV +GD +GHVGLGVKCSKEVATAIRGAI
Sbjct: 2 TKLGRLVKD--MKIKSLEEIYLFS--LPIKAFVAIGDYNGHVGLGVKCSKEVATAIRGAI 57
Query: 137 ILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ 196
ILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L
Sbjct: 58 ILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLM 117
Query: 197 FAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
AGIDD +TS+RG T TLGNF KATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 118 MAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 175
Score = 113 (44.8 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 44 VTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGH 81
VTKLGRLV++ KI+SLE+IYL SLPIK + I GH
Sbjct: 1 VTKLGRLVKDMKIKSLEEIYLFSLPIKAFVAIGDYNGH 38
>UNIPROTKB|E9PM36 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 IPI:IPI00977151
ProteinModelPortal:E9PM36 SMR:E9PM36 Ensembl:ENST00000529806
ArrayExpress:E9PM36 Bgee:E9PM36 Uniprot:E9PM36
Length = 209
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 117/148 (79%), Positives = 133/148 (89%)
Query: 70 KEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVA 129
+E +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVA
Sbjct: 59 EESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVA 118
Query: 130 TAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAAR 189
TAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A
Sbjct: 119 TAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAP 178
Query: 190 VPKKVLQFAGIDDVFTSSRGSTKTLGNF 217
VPKK+L AGIDD +TS+RG T TLGNF
Sbjct: 179 VPKKLLMMAGIDDCYTSARGCTATLGNF 206
>UNIPROTKB|I3L404 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 Ensembl:ENST00000526586
Bgee:I3L404 Uniprot:I3L404
Length = 155
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 117/147 (79%), Positives = 132/147 (89%)
Query: 71 EYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVAT 130
E +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVAT
Sbjct: 1 ESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVAT 60
Query: 131 AIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARV 190
AIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A V
Sbjct: 61 AIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPV 120
Query: 191 PKKVLQFAGIDDVFTSSRGSTKTLGNF 217
PKK+L AGIDD +TS+RG T TLGNF
Sbjct: 121 PKKLLMMAGIDDCYTSARGCTATLGNF 147
>UNIPROTKB|J9PAX1 [details] [associations]
symbol:J9PAX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:AAEX03012471
Ensembl:ENSCAFT00000029347 Uniprot:J9PAX1
Length = 218
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 127/215 (59%), Positives = 155/215 (72%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLVR+ KI+SLE+IYL SLP E +IID +G LKDEV+KI PVQ Q RA
Sbjct: 4 EWIPVTKLGRLVRDMKIKSLEKIYLLSLPNGESEIIDFFLGASLKDEVLKIRPVQNQPRA 63
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
G RTRFKA V + +G VGLGVKCSKEVATA GAIILAKLS++PV WG++IG+
Sbjct: 64 GLRTRFKALVAIKHYNGRVGLGVKCSKEVATATHGAIILAKLSIVPV----WGDEIGKSQ 119
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 219
V CKVT CGSV VR++PAP+G GIV+A VPKK+L AG D + S+RG LG+F K
Sbjct: 120 AVRCKVTCLCGSVLVRLIPAPKGTGIVSAPVPKKLLMMAGTDHCYPSARGCPAALGHFAK 179
Query: 220 ATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
ATF+ + KTY +LT + PYQE+TD L
Sbjct: 180 ATFDAVSKTYSYLT------LTPGEPPYQEFTDHL 208
>UNIPROTKB|F1S275 [details] [associations]
symbol:F1S275 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:CU407229
Ensembl:ENSSSCT00000006592 Uniprot:F1S275
Length = 270
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 124/217 (57%), Positives = 151/217 (69%)
Query: 40 KWVPVTKLGRLVR-EGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKD-EVMKIMPVQKQT 97
+W+PVT+L R E ++ + L SLPIKE IID G + +V+KIMPVQKQT
Sbjct: 41 EWLPVTELDLSQRQEDQVSGRD---LFSLPIKESAIIDFFGGRGGRPLKVLKIMPVQKQT 97
Query: 98 RAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGR 157
AG +TRFKAFV + D +GHVGLGVKCSKEVATAIRGAI P+ R YWGNKIG+
Sbjct: 98 CAGHQTRFKAFVPIRDYNGHVGLGVKCSKEVATAIRGAIFWPNS---PLSRAYWGNKIGK 154
Query: 158 PHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNF 217
P T+PCKVTG CG V V ++PAPRG GIV+ VPKK+L AGI+D +TS+RG T TLGN
Sbjct: 155 PRTLPCKVTGCCGYVLVCLIPAPRGTGIVSTPVPKKLLMMAGIEDCYTSARGCTATLGNL 214
Query: 218 VKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
KAT + + K Y +LTP +E F K PYQE+TD L
Sbjct: 215 AKATLDAISKMYNYLTP-ISKELVFTKPPYQEFTDRL 250
>UNIPROTKB|E9PPT0 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
GO:GO:0015935 EMBL:AC005363 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 HGNC:HGNC:10404 IPI:IPI00977651
ProteinModelPortal:E9PPT0 SMR:E9PPT0 PRIDE:E9PPT0
Ensembl:ENST00000530225 ArrayExpress:E9PPT0 Bgee:E9PPT0
Uniprot:E9PPT0
Length = 197
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 102/125 (81%), Positives = 116/125 (92%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
GQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PH
Sbjct: 119 GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPH 178
Query: 160 TVPCK 164
TVPCK
Sbjct: 179 TVPCK 183
>UNIPROTKB|F1LUJ6 [details] [associations]
symbol:F1LUJ6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
GeneTree:ENSGT00390000001433 IPI:IPI00949941
Ensembl:ENSRNOT00000003897 Uniprot:F1LUJ6
Length = 218
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 111/214 (51%), Positives = 148/214 (69%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
KW+ + +L LV++ KI+SLE++YL SL E +IID G LK++ + V T
Sbjct: 10 KWILIIRLCHLVKDKKIKSLEEMYLFSLSNNESEIIDFFQGVSLKED--HVNEVADLT-- 65
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
QRTRFKAFV +GD + HVGL VKC KEVATA+ GA ILAKLS++P G++IG+PH
Sbjct: 66 AQRTRFKAFVAIGDYNSHVGLSVKCPKEVATAMGGATILAKLSIVPCGEAT-GDEIGKPH 124
Query: 160 TVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFA-GIDDVFTSSRGSTKTLGNFV 218
VPCKVTG+C SV V ++PAPRG GIV++ VP+K+L GI D T++RG TLG+F
Sbjct: 125 AVPCKVTGRCSSVLVHLIPAPRGTGIVSSPVPRKLLMLKDGIADCHTAARGHNTTLGSFA 184
Query: 219 KATF-ECLLKTYGFLTPDFWRETRFVKSPYQEYT 251
KA + + KTY +LTP+FW E F+ SPYQ++T
Sbjct: 185 KADICDSIFKTYSYLTPNFWTENWFIMSPYQKFT 218
>UNIPROTKB|E2QWF1 [details] [associations]
symbol:E2QWF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR014721 PANTHER:PTHR13718 GeneTree:ENSGT00390000001433
EMBL:AAEX03013493 Ensembl:ENSCAFT00000008126 OMA:TERACIP
Uniprot:E2QWF1
Length = 179
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 97/139 (69%), Positives = 114/139 (82%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRL ++ KI+SLE IYL SLPIKE +I D L G LKDEV+KIMPV+K TRA
Sbjct: 47 EWIPVTKLGRLAKDMKIKSLE-IYLFSLPIKESEITDFL-GASLKDEVLKIMPVEKHTRA 104
Query: 100 GQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPH 159
G +TRF+AFV +GD + HVGLG+K SKEVATAIRG IILAKLSV R+GYWGNKI +PH
Sbjct: 105 GPQTRFRAFVAMGDYNRHVGLGIKGSKEVATAIRG-IILAKLSV---RQGYWGNKILKPH 160
Query: 160 TVPCKVTGKCGSVTVRMVP 178
TV CKVTG CGSV V ++P
Sbjct: 161 TVLCKVTGHCGSVLVHLIP 179
>UNIPROTKB|J9P3M6 [details] [associations]
symbol:J9P3M6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR014721 PANTHER:PTHR13718 GeneTree:ENSGT00390000001433
EMBL:AAEX03010296 Ensembl:ENSCAFT00000008016 Uniprot:J9P3M6
Length = 269
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 104/210 (49%), Positives = 137/210 (65%)
Query: 45 TKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTR 104
TKLGRLVR+ K +SLE++ L SLPI+E +++D+ +G LK EV+K + V+KQ AGQRTR
Sbjct: 51 TKLGRLVRDMKTKSLEELQLFSLPIRESEVLDSFLGTSLKGEVLKTLLVKKQPCAGQRTR 110
Query: 105 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCK 164
FKAF V D +GHVGLGV+CSKEVA AI G +ILA L I RGYWGNK +PHT+ C+
Sbjct: 111 FKAFTAVRDNNGHVGLGVQCSKEVAAAICG-VILATLCTI-AWRGYWGNKTSKPHTILCQ 168
Query: 165 VTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEC 224
VT G+++ + P P+G G+V+A VPKK+L G +D S R T LG+ KA+
Sbjct: 169 VT--TGALSWYVSP-PQGPGVVSAPVPKKLLMLVGTEDCCPSPRNCTGALGDLAKASSMP 225
Query: 225 LLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
+ L D +PYQE TDL+
Sbjct: 226 ISPLETSLKRDC-----LCSAPYQELTDLV 250
>RGD|1586357 [details] [associations]
symbol:LOC689943 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 Pfam:PF03719 RGD:1586357
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 IPI:IPI00567447
Ensembl:ENSRNOT00000050867 OMA:MARIEDC Uniprot:F1LVD1
Length = 192
Score = 292 (107.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 52/88 (59%), Positives = 68/88 (77%)
Query: 164 KVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFE 223
KVTG+CGS+ V ++P+PRG GIV+A VPKK+L + DD + S+RG T TLGNF KA+F+
Sbjct: 83 KVTGRCGSMLVYLIPSPRGTGIVSASVPKKLLLMSVTDDCYNSARGCTATLGNFAKASFD 142
Query: 224 CLLKTYGFLTPDFWRETRFVKSPYQEYT 251
+ KTY +LT D W+ET F KSPYQE+T
Sbjct: 143 AISKTYSYLTADLWKETVFTKSPYQEFT 170
Score = 176 (67.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 40 KWVPVTKL-GRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTR 98
+W+ +T + G LV++ KI+SLE+ YL SL IKE +IID +G L+DEV+ I P QKQTR
Sbjct: 17 EWIFITTMMGCLVKDMKIKSLEETYLFSLSIKESEIIDFFLGASLQDEVLTIRP-QKQTR 75
Query: 99 AGQRTRFK 106
AGQRTR K
Sbjct: 76 AGQRTRGK 83
Score = 38 (18.4 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 70 KEYQIIDTLIGHKLKDEVMKIMPVQK 95
KE+ I T++G +KD MKI +++
Sbjct: 16 KEWIFITTMMGCLVKD--MKIKSLEE 39
>UNIPROTKB|F1LUE4 [details] [associations]
symbol:F1LUE4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 InterPro:IPR014720 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR13718 GeneTree:ENSGT00390000001433
IPI:IPI00188513 Ensembl:ENSRNOT00000015702 Uniprot:F1LUE4
Length = 158
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 84/153 (54%), Positives = 107/153 (69%)
Query: 102 RTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTV 161
+TRFKAF+ + D +GH+GLG+KC + +++P +RG WGNKIG+P TV
Sbjct: 1 QTRFKAFIAIRDYNGHIGLGIKCYCNLR------------AIVPGQRGSWGNKIGKPRTV 48
Query: 162 PCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKAT 221
PCKVTG+CGSV V + PAPRG GIV+A VPKK L AGIDD +TS+RG T LGNF KAT
Sbjct: 49 PCKVTGRCGSVLVGLFPAPRGTGIVSAPVPKKRLVMAGIDDCYTSARGCTAILGNFAKAT 108
Query: 222 FECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
F+ + K +LTPD W+E+ F K P QE+TD L
Sbjct: 109 FDAIFK---YLTPDLWKESVFTKFPSQEFTDHL 138
>UNIPROTKB|F1M474 [details] [associations]
symbol:F1M474 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00565365 Ensembl:ENSRNOT00000044113 Uniprot:F1M474
Length = 222
Score = 217 (81.4 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 56/110 (50%), Positives = 69/110 (62%)
Query: 42 VPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQ 101
+PVTKLG V + I+S YL SL KE +IID +G LKDE +KIMPV +Q G
Sbjct: 28 IPVTKLGHRVND--IKS----YLFSLS-KESEIIDFFLGASLKDEGLKIMPVWEQIWTGH 80
Query: 102 RTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAK---LSVIPVRR 148
+TR KA V GD +GHVGLGVK SKE+ I+GAI A + +IP R
Sbjct: 81 QTRVKALVSTGDYNGHVGLGVKYSKELVIVIQGAITAAVTLLVGLIPAPR 130
Score = 201 (75.8 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 38/70 (54%), Positives = 49/70 (70%)
Query: 171 SVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYG 230
++ V ++PAPR IV+ V KK+L AGIDD +T RG TLGNF KATF+ + KTY
Sbjct: 120 TLLVGLIPAPRATVIVSVPVLKKLLVMAGIDDCYTLVRGCAATLGNFAKATFDAISKTYN 179
Query: 231 FLTPDFWRET 240
+LTPD W+ET
Sbjct: 180 YLTPDLWKET 189
>UNIPROTKB|F1PW41 [details] [associations]
symbol:F1PW41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 EMBL:AAEX03002492
Ensembl:ENSCAFT00000024499 Uniprot:F1PW41
Length = 193
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 89/168 (52%), Positives = 115/168 (68%)
Query: 83 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLS 142
+K + ++I +K+T AGQ+TRFKAFVV D +GHV L V S+EVATAIRGAIIL + S
Sbjct: 8 VKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSLNV--SREVATAIRGAIILDRSS 65
Query: 143 VIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDD 202
+ G+ GNKI +PHTV C+VT SV V + APRG I++A VPKK+L+ A IDD
Sbjct: 66 IAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDD 125
Query: 203 VFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEY 250
+ +RG T L N +KAT++ + KTY LT DFW T F KSPYQE+
Sbjct: 126 GDSLARGCTAILDNVIKATYD-ISKTYVSLTSDFW--TVFTKSPYQEF 170
>UNIPROTKB|F1LUA6 [details] [associations]
symbol:F1LUA6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00561961 Ensembl:ENSRNOT00000051118 OMA:NIAKATY
Uniprot:F1LUA6
Length = 127
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 78/137 (56%), Positives = 94/137 (68%)
Query: 116 GHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVR 175
GHVGL VKCSK+V TA+ LAKLS IPV RGYW NK G+PHTV CKVTG CGSV VR
Sbjct: 3 GHVGLSVKCSKKVVTAVH----LAKLSTIPVWRGYW-NKTGKPHTVSCKVTGCCGSVPVR 57
Query: 176 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPD 235
++ AP G GIV+ VPKKVL GIDD + S +G TLGNF KA+++ + Y +LT
Sbjct: 58 LISAPGGTGIVSVPVPKKVLMMTGIDDCYISGKGCMTTLGNFAKASYDVISNIYSYLTI- 116
Query: 236 FWRETRFVKSPYQEYTD 252
F +SPYQ++TD
Sbjct: 117 ------FTRSPYQKFTD 127
>UNIPROTKB|E9PQD7 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
Pfam:PF03719 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC005363
PANTHER:PTHR13718 HGNC:HGNC:10404 IPI:IPI00979595
ProteinModelPortal:E9PQD7 SMR:E9PQD7 PRIDE:E9PQD7
Ensembl:ENST00000526522 ArrayExpress:E9PQD7 Bgee:E9PQD7
Uniprot:E9PQD7
Length = 235
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 82/176 (46%), Positives = 111/176 (63%)
Query: 80 GHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILA 139
G K +D+ + MPV K R + + K+ + L +K S E+ GA +
Sbjct: 52 GGKAEDK--EWMPVTKLGRLVKDMKIKSLEEIY----LFSLPIKES-EIIDFFLGASLKD 104
Query: 140 K-LSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFA 198
+ L ++PV++ + G+ KVTG+CGSV VR++PAPRG GIV+A VPKK+L A
Sbjct: 105 EVLKIMPVQKQ---TRAGQ--RTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMA 159
Query: 199 GIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
GIDD +TS+RG T TLGNF KATF+ + KTY +LTPD W+ET F KSPYQE+TD L
Sbjct: 160 GIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 215
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 51/67 (76%), Positives = 60/67 (89%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 59 EWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 118
Query: 100 GQRTRFK 106
GQRTRFK
Sbjct: 119 GQRTRFK 125
>RGD|1589430 [details] [associations]
symbol:LOC680646 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 RGD:1589430 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 IPI:IPI00557169
Ensembl:ENSRNOT00000036337 Uniprot:F1M0D1
Length = 210
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 78/174 (44%), Positives = 102/174 (58%)
Query: 81 HKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAK 140
+K+ D + + P QKQT+ GQ+ R K F GD +GHVGLG+KCSKEVATA +G + +
Sbjct: 29 YKIID-FLCVYPCQKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQ 87
Query: 141 LSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGI 200
L ++ R V KVT GSV V ++PAPRG GIV+A V K L AGI
Sbjct: 88 LGE---------TRLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGI 138
Query: 201 DDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
+ + S+R T TL NF K T E + KTY +LT + T F KSP++E T L
Sbjct: 139 YNCYISARCYTATLYNFSKPTIEVISKTYRYLTVNL--PTLFTKSPFKELTSHL 190
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 45/99 (45%), Positives = 61/99 (61%)
Query: 43 PVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQR 102
P + G LV++ K + LE Y+ SL +K+Y+IID L + P QKQT+ GQ+
Sbjct: 1 PCHQAGPLVKDTKNKFLET-YMFSLLMKKYKIIDFLC----------VYPCQKQTQTGQK 49
Query: 103 TRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKL 141
R K F GD +GHVGLG+KCSKEVATA +G + +L
Sbjct: 50 NRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 88
>UNIPROTKB|E9PTW0 [details] [associations]
symbol:E9PTW0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR13718
GeneTree:ENSGT00390000001433 IPI:IPI00764530
Ensembl:ENSRNOT00000044776 Uniprot:E9PTW0
Length = 122
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 60/81 (74%), Positives = 72/81 (88%)
Query: 40 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRA 99
+W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRA
Sbjct: 35 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRA 94
Query: 100 GQRTRFKAFVVVGDTDGHVGL 120
GQRTRFKAFV +GD +GH+GL
Sbjct: 95 GQRTRFKAFVAIGDYNGHLGL 115
>UNIPROTKB|F1M103 [details] [associations]
symbol:F1M103 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00557027 Ensembl:ENSRNOT00000045740 Uniprot:F1M103
Length = 149
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 55/101 (54%), Positives = 73/101 (72%)
Query: 154 KIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKT 213
++ +PHTV CK G C SV+V ++PAPRG GIV+ V KK+L A ID+ ++S+RG T T
Sbjct: 8 QVDKPHTVSCKAMGLCSSVSVCLIPAPRGTGIVSGPVLKKLLMMASIDNYYSSARGYTAT 67
Query: 214 LGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 254
L NF K TF+ + KTY +LTP+ W+ET F KS YQE+TD L
Sbjct: 68 LSNFAKTTFDDISKTYSYLTPNLWKETVFTKSLYQEFTDHL 108
>UNIPROTKB|F1M7B2 [details] [associations]
symbol:F1M7B2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR014721 PANTHER:PTHR13718 IPI:IPI00781455
Ensembl:ENSRNOT00000060566 Uniprot:F1M7B2
Length = 173
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 71/162 (43%), Positives = 87/162 (53%)
Query: 41 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAG 100
WV + LG LV+E KI+SLE P II+ +G LKDEV++ M Q Q
Sbjct: 24 WVFINNLGCLVKE-KIKSLESCS----PFSSSDIIEFFLGEHLKDEVLRTMLAQNQ---- 74
Query: 101 QRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHT 160
RTR K F + L V CSKEV TA + AI L + + GY GNKIG PHT
Sbjct: 75 -RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Query: 161 VPCKVTG-KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGID 201
+PC VT + V V + APRG G V+A VPKK+ A ID
Sbjct: 132 IPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASID 173
>UNIPROTKB|F1M9M7 [details] [associations]
symbol:F1M9M7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00779798 Ensembl:ENSRNOT00000037793 Uniprot:F1M9M7
Length = 140
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 47/81 (58%), Positives = 58/81 (71%)
Query: 152 GNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 211
GNKIG+ H V CKVTG CGSV V ++PA RG GI +A VP K L AGIDD +TS+RG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 212 KTLGNFVKATFECLLKTYGFL 232
+L F +ATF+ + KTY +L
Sbjct: 67 ASLDYFAQATFDAIFKTYSYL 87
>TIGR_CMR|BA_0127 [details] [associations]
symbol:BA_0127 "ribosomal protein S5" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:NP_842695.1
RefSeq:YP_016732.1 RefSeq:YP_026413.1 ProteinModelPortal:Q81VR3
SMR:Q81VR3 DNASU:1083790 EnsemblBacteria:EBBACT00000013084
EnsemblBacteria:EBBACT00000016262 EnsemblBacteria:EBBACT00000019813
GeneID:1083790 GeneID:2814389 GeneID:2850890 KEGG:ban:BA_0127
KEGG:bar:GBAA_0127 KEGG:bat:BAS0127
BioCyc:BANT260799:GJAJ-138-MONOMER
BioCyc:BANT261594:GJ7F-140-MONOMER Uniprot:Q81VR3
Length = 166
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 55/140 (39%), Positives = 79/140 (56%)
Query: 82 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKL 141
+L++ V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK
Sbjct: 10 ELEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKK 69
Query: 142 SVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGID 201
++I V G I PHT+ G G+ V + PA G G++A + VL+ AG+
Sbjct: 70 NLIAVP--LVGTTI--PHTI----NGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQ 121
Query: 202 DVFTSSRGSTKTLGNFVKAT 221
D+ + S GS + N ++AT
Sbjct: 122 DILSKSLGSNTPI-NMIRAT 140
>TIGR_CMR|CHY_2292 [details] [associations]
symbol:CHY_2292 "ribosomal protein S5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:YP_361101.1
ProteinModelPortal:Q3A9T3 SMR:Q3A9T3 STRING:Q3A9T3 GeneID:3727429
KEGG:chy:CHY_2292 PATRIC:21277655
BioCyc:CHYD246194:GJCN-2291-MONOMER Uniprot:Q3A9T3
Length = 167
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 55/149 (36%), Positives = 79/149 (53%)
Query: 82 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKL 141
+L ++V+ I K + G+R F A VVVGD GHVG+G+ + EV AIR I AK
Sbjct: 10 ELSEKVIAINRTAKVVKGGRRFSFSALVVVGDQKGHVGVGLGKAPEVPDAIRKGIEDAKK 69
Query: 142 SVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGID 201
++I V I T+P ++ G+ G+ V + PA G G++A + +L+ AG+
Sbjct: 70 NLIKV-------PIVNT-TIPHEIIGEAGAGKVLLKPAAPGTGVIAGSAVRAILEMAGVR 121
Query: 202 DVFTSSRGSTKTLGNFVKATFECL--LKT 228
D+ T S GS N AT E L LKT
Sbjct: 122 DILTKSLGSNNP-HNMAHATIEALKSLKT 149
>TIGR_CMR|GSU_2840 [details] [associations]
symbol:GSU_2840 "ribosomal protein S5" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005712 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B OMA:YNASKIL RefSeq:NP_953883.1
ProteinModelPortal:Q749A4 SMR:Q749A4 GeneID:2686827
KEGG:gsu:GSU2840 PATRIC:22028527
BioCyc:GSUL243231:GH27-2799-MONOMER Uniprot:Q749A4
Length = 162
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 53/143 (37%), Positives = 74/143 (51%)
Query: 83 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLS 142
L D+V+ I V K + G+R F A VVVGD +G VG G+ + EV AIR + AK +
Sbjct: 11 LTDKVVHISRVAKVVKGGRRFSFSALVVVGDGNGCVGYGLGKANEVPEAIRKGVEQAKKN 70
Query: 143 VIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDD 202
+I V I HT+P +V G G+ V + PA G G++A + V + AG+ +
Sbjct: 71 LIKV-------PIVEGHTIPYEVLGHFGAGRVLIKPASAGTGVIAGGAARAVFEAAGLHN 123
Query: 203 VFTSSRGSTKTLGNFVKATFECL 225
V + GS N VKA F L
Sbjct: 124 VLSKCLGSNNP-HNVVKAAFNGL 145
>TIGR_CMR|SPO_0502 [details] [associations]
symbol:SPO_0502 "ribosomal protein S5" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_165764.1 ProteinModelPortal:Q5LW41
SMR:Q5LW41 GeneID:3195459 KEGG:sil:SPO0502 PATRIC:23374265
Uniprot:Q5LW41
Length = 190
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 53/143 (37%), Positives = 73/143 (51%)
Query: 85 DEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVI 144
D ++ I V K + G+R F A VVVGD G VG G +KEV AIR A AK +I
Sbjct: 23 DRLVAINRVSKTVKGGKRFGFAALVVVGDQKGRVGFGKGKAKEVPEAIRKATEQAKRQMI 82
Query: 145 PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVF 204
V+ + GR T+ + G+ G+ V M AP G GI+A + V + G+ DV
Sbjct: 83 RVQL-----REGR--TLHHDIEGRHGAGKVVMRAAPEGTGIIAGGPMRAVFEMLGVKDVV 135
Query: 205 TSSRGSTKTLGNFVKATFECLLK 227
+ S GS N ++AT + L K
Sbjct: 136 SKSLGSANPY-NMIRATIDGLKK 157
>TIGR_CMR|DET_0491 [details] [associations]
symbol:DET_0491 "ribosomal protein S5" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550 HAMAP:MF_01307_B
RefSeq:YP_181235.1 ProteinModelPortal:Q3Z964 STRING:Q3Z964
GeneID:3230239 KEGG:det:DET0491 PATRIC:21608051
BioCyc:DETH243164:GJNF-491-MONOMER Uniprot:Q3Z964
Length = 172
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 51/140 (36%), Positives = 72/140 (51%)
Query: 82 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKL 141
+L D+++ I V K + G+R F A VV GD HVG+GV +KEV +AI A AK
Sbjct: 14 ELNDKLIFINRVTKVVKGGKRMGFAALVVTGDGKNHVGIGVGKAKEVPSAISKASANAKR 73
Query: 142 SVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGID 201
++ + G TVP ++ K G+ V + PA G GI+A + VL+ GI
Sbjct: 74 NLSRILLN--GT------TVPHEIVFKYGAAQVLLKPAAPGTGIIAGGSVRAVLESTGIK 125
Query: 202 DVFTSSRGSTKTLGNFVKAT 221
D+ T S G + N KAT
Sbjct: 126 DILTKSMGCSNK-ANVAKAT 144
>TIGR_CMR|CJE_1858 [details] [associations]
symbol:CJE_1858 "ribosomal protein S5" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0006450 "regulation of translational fidelity" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005712 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_179828.1 ProteinModelPortal:Q5HSA7
SMR:Q5HSA7 STRING:Q5HSA7 GeneID:3232485 KEGG:cjr:CJE1858
PATRIC:20045548 OMA:YNASKIL BioCyc:CJEJ195099:GJC0-1897-MONOMER
Uniprot:Q5HSA7
Length = 147
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 48/149 (32%), Positives = 77/149 (51%)
Query: 82 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKL 141
+ ++ ++ I V K + G+R RF A V+VG+ G VG+G +KEV AIR A+ A
Sbjct: 8 EFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLVGVGYGKAKEVPDAIRKAVDDAFK 67
Query: 142 SVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGID 201
+++ V+ G+ I H V K + + PA G G++A + +++ AGI
Sbjct: 68 NIVEVKTK--GSTIA--HDVEVKYNAS----RILLKPASEGTGVIAGGSTRPIVELAGIK 119
Query: 202 DVFTSSRGSTKTLGNFVKATFECLLKTYG 230
D+ T S GS + N V+AT + L G
Sbjct: 120 DILTKSLGSNNS-ANVVRATIKALTMLKG 147
>TAIR|locus:2057645 [details] [associations]
symbol:EMB3113 "EMBRYO DEFECTIVE 3113" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005840 "ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0009409
"response to cold" evidence=IEP;RCA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0016020 "membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005634 GO:GO:0046686
GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0009409 Gene3D:3.30.160.20 GO:GO:0003735 GO:GO:0009535
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U78721 KO:K02988
GO:GO:0015935 EMBL:AY093289 EMBL:AY054523 EMBL:AY087734
IPI:IPI00526383 PIR:G84749 RefSeq:NP_180936.1 UniGene:At.24873
HSSP:Q5SHQ5 ProteinModelPortal:P93014 SMR:P93014 STRING:P93014
World-2DPAGE:0003:P93014 PaxDb:P93014 PRIDE:P93014 ProMEX:P93014
EnsemblPlants:AT2G33800.1 GeneID:817947 KEGG:ath:AT2G33800
GeneFarm:35 TAIR:At2g33800 eggNOG:COG0098 HOGENOM:HOG000072595
InParanoid:P93014 OMA:NARATIK PhylomeDB:P93014
ProtClustDB:CLSN2683512 Genevestigator:P93014 GermOnline:AT2G33800
InterPro:IPR018192 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 Uniprot:P93014
Length = 303
Score = 177 (67.4 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 42/138 (30%), Positives = 75/138 (54%)
Query: 84 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSV 143
++ V+++ V K + G++ +F+A VVVGD G+VG+G +KEV A++ + I A+ ++
Sbjct: 148 EERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNI 207
Query: 144 IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDV 203
+ V + + T P + G G+ V + PA G G++A + VL+ AG+++
Sbjct: 208 VQV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 260
Query: 204 FTSSRGSTKTLGNFVKAT 221
GS L N +AT
Sbjct: 261 LGKQLGSNNALNN-ARAT 277
>UNIPROTKB|Q9KP01 [details] [associations]
symbol:rpsE "30S ribosomal protein S5" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B PIR:E82057 RefSeq:NP_232207.1
ProteinModelPortal:Q9KP01 SMR:Q9KP01 PRIDE:Q9KP01 DNASU:2615596
GeneID:2615596 KEGG:vch:VC2579 PATRIC:20084184 Uniprot:Q9KP01
Length = 167
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 47/144 (32%), Positives = 78/144 (54%)
Query: 83 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLS 142
L+++++ + V K + G+ F A VVGD +G VG G ++EV AI+ A+ A+ S
Sbjct: 12 LQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRS 71
Query: 143 VIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDD 202
++ + N+ G H P K G+ V M PA G G++A + VL+ AG+ +
Sbjct: 72 MVTIAL----NE-GTLHH-PVK--GRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHN 123
Query: 203 VFTSSRGSTKTLGNFVKATFECLL 226
V + + GST + N V+AT + L+
Sbjct: 124 VLSKAYGSTNPI-NIVRATIDALV 146
>TIGR_CMR|VC_2579 [details] [associations]
symbol:VC_2579 "ribosomal protein S5" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B PIR:E82057 RefSeq:NP_232207.1
ProteinModelPortal:Q9KP01 SMR:Q9KP01 PRIDE:Q9KP01 DNASU:2615596
GeneID:2615596 KEGG:vch:VC2579 PATRIC:20084184 Uniprot:Q9KP01
Length = 167
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 47/144 (32%), Positives = 78/144 (54%)
Query: 83 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLS 142
L+++++ + V K + G+ F A VVGD +G VG G ++EV AI+ A+ A+ S
Sbjct: 12 LQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRS 71
Query: 143 VIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDD 202
++ + N+ G H P K G+ V M PA G G++A + VL+ AG+ +
Sbjct: 72 MVTIAL----NE-GTLHH-PVK--GRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHN 123
Query: 203 VFTSSRGSTKTLGNFVKATFECLL 226
V + + GST + N V+AT + L+
Sbjct: 124 VLSKAYGSTNPI-NIVRATIDALV 146
>TIGR_CMR|SO_0248 [details] [associations]
symbol:SO_0248 "ribosomal protein S5" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:NP_715888.1 ProteinModelPortal:P59124
SMR:P59124 GeneID:1168131 KEGG:son:SO_0248 PATRIC:23520189
Uniprot:P59124
Length = 167
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 47/144 (32%), Positives = 77/144 (53%)
Query: 83 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLS 142
L+++++ + V K + G+ F A VVGD +G VG G ++EV AI+ A+ A+ +
Sbjct: 12 LQEKLIAVNRVSKVVKGGRIFSFTALTVVGDGNGKVGYGYGKAREVPAAIQKAMEKARRN 71
Query: 143 VIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDD 202
++ V G H P K G+ V M PA +G GI+A + VL+ AG+ +
Sbjct: 72 MVTVELN-----AGTLHH-PVK--GRHTGSRVYMQPASQGTGIIAGGAMRAVLEVAGVHN 123
Query: 203 VFTSSRGSTKTLGNFVKATFECLL 226
V + + GST + N V+AT + L+
Sbjct: 124 VLSKAYGSTNPI-NIVRATVDALV 146
>TIGR_CMR|CPS_0618 [details] [associations]
symbol:CPS_0618 "ribosomal protein S5" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT HAMAP:MF_01307_B
RefSeq:YP_267368.1 ProteinModelPortal:Q488Z6 SMR:Q488Z6
STRING:Q488Z6 PRIDE:Q488Z6 GeneID:3519484 KEGG:cps:CPS_0618
PATRIC:21464563 BioCyc:CPSY167879:GI48-705-MONOMER Uniprot:Q488Z6
Length = 169
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 45/147 (30%), Positives = 75/147 (51%)
Query: 83 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLS 142
+ ++++ + V K + G+ F A VVGD +G VG G ++EV AI+ A+ A +
Sbjct: 14 MAEKLIAVNRVSKVVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKAHRN 73
Query: 143 VIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDD 202
++ + G + H + TGK V M PA G GI+A + VL+ AG+ +
Sbjct: 74 IVTI--DLKGTTL--QHVI----TGKHSGSKVFMKPASEGTGIIAGGAMRAVLEVAGVQN 125
Query: 203 VFTSSRGSTKTLGNFVKATFECLLKTY 229
V + + GST + N V+AT L+ +
Sbjct: 126 VLSKAYGSTNPI-NVVRATVSALVNMH 151
>UNIPROTKB|P66574 [details] [associations]
symbol:rpsE "30S ribosomal protein S5" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 Gene3D:3.30.160.20
EMBL:BX842574 GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988
GO:GO:0015935 eggNOG:COG0098 HOGENOM:HOG000072595
InterPro:IPR018192 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 ProtClustDB:PRK00550 HAMAP:MF_01307_B PIR:D70644
RefSeq:NP_215235.1 RefSeq:NP_335166.1 RefSeq:YP_006514065.1
ProteinModelPortal:P66574 SMR:P66574 PRIDE:P66574
EnsemblBacteria:EBMYCT00000001380 EnsemblBacteria:EBMYCT00000069406
GeneID:13318610 GeneID:888465 GeneID:926039 KEGG:mtc:MT0746
KEGG:mtu:Rv0721 KEGG:mtv:RVBD_0721 PATRIC:18123375
TubercuList:Rv0721 OMA:QNEGREG Uniprot:P66574
Length = 220
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 49/141 (34%), Positives = 69/141 (48%)
Query: 85 DEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVI 144
+ V+ I V K + G+R F A V+VGD +G VG+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 145 PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVF 204
V IG T P V G+ + V + PA G G++A + VL+ AG+ D+
Sbjct: 104 RVPL------IGGTITHP--VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDIL 155
Query: 205 TSSRGSTKTLGNFVKATFECL 225
S GS + N V AT L
Sbjct: 156 AKSLGSDNAI-NVVHATVAAL 175
>UNIPROTKB|P0A7W1 [details] [associations]
symbol:rpsE "30S ribosomal subunit protein S5"
species:83333 "Escherichia coli K-12" [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0046677 "response to
antibiotic" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:X01563 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0046677 EMBL:U18997 GO:GO:0003735
GO:GO:0019843 PDB:3J00 PDBsum:3J00 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PDB:3FIH
PDB:3IZV PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW KO:K02988
GO:GO:0015935 PDB:3SFS PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ PDB:1EG0
PDBsum:1EG0 eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 PDB:4GAS
PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87
PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P
PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF
PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO
PDB:2VHP PDB:2WWL PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A
PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21
PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18
PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2Z4K PDBsum:2Z4M PDBsum:3DF1
PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M PDBsum:3I1O
PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21 PDBsum:3J0U
PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10 PDBsum:3J13
PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR PDBsum:3OFA
PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX PDBsum:3OFY
PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV PDBsum:4GAQ
PDBsum:4GD2 OMA:HNVVKAT ProtClustDB:PRK00550 HAMAP:MF_01307_B
PIR:B65123 RefSeq:NP_417762.1 RefSeq:YP_492129.1
ProteinModelPortal:P0A7W1 SMR:P0A7W1 IntAct:P0A7W1 PaxDb:P0A7W1
PRIDE:P0A7W1 EnsemblBacteria:EBESCT00000004415
EnsemblBacteria:EBESCT00000014509 GeneID:12934414 GeneID:947795
KEGG:ecj:Y75_p3873 KEGG:eco:b3303 PATRIC:32122038 EchoBASE:EB0897
EcoGene:EG10904 BioCyc:EcoCyc:EG10904-MONOMER
BioCyc:ECOL316407:JW3265-MONOMER EvolutionaryTrace:P0A7W1
Genevestigator:P0A7W1 Uniprot:P0A7W1
Length = 167
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 48/144 (33%), Positives = 74/144 (51%)
Query: 82 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKL 141
+L+++++ + V K + G+ F A VVGD +G VG G ++EV AI+ A+ A+
Sbjct: 10 ELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARR 69
Query: 142 SVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGID 201
++I V N H V TG V M PA G GI+A + VL+ AG+
Sbjct: 70 NMINVAL----NNGTLQHPVKGVHTGS----RVFMQPASEGTGIIAGGAMRAVLEVAGVH 121
Query: 202 DVFTSSRGSTKTLGNFVKATFECL 225
+V + GST + N V+AT + L
Sbjct: 122 NVLAKAYGSTNPI-NVVRATIDGL 144
>TIGR_CMR|CBU_0255 [details] [associations]
symbol:CBU_0255 "ribosomal protein S5" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:NP_819299.1 ProteinModelPortal:Q83EQ9
SMR:Q83EQ9 PRIDE:Q83EQ9 GeneID:1208136 KEGG:cbu:CBU_0255
PATRIC:17929203 BioCyc:CBUR227377:GJ7S-261-MONOMER Uniprot:Q83EQ9
Length = 168
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/143 (30%), Positives = 76/143 (53%)
Query: 83 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLS 142
++++++ + K + G+ F A VV GD DG VG G+ ++EV +AI+ A A+ +
Sbjct: 13 IQEKLVAVRRTAKVVKGGRVFGFSALVVAGDGDGKVGFGLGKAREVPSAIQKATENARRN 72
Query: 143 VIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDD 202
+I V +G + H + K T S TV M+PA G G++A + + + G+ +
Sbjct: 73 MISVP--LYGATLH--HAI--KATH--ASSTVLMLPASEGTGVIAGNAMRAIFEVMGVQN 124
Query: 203 VFTSSRGSTKTLGNFVKATFECL 225
V GS+ + N V+ATF+ L
Sbjct: 125 VLAKCIGSSNPI-NVVRATFKGL 146
>UNIPROTKB|H3BNG3 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC005363 PANTHER:PTHR13718
HGNC:HGNC:10404 Ensembl:ENST00000563194 Bgee:H3BNG3 Uniprot:H3BNG3
Length = 44
Score = 148 (57.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 42 VPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKD 85
+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKD
Sbjct: 1 MPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKD 44
>UNIPROTKB|H0YE27 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC005363 PANTHER:PTHR13718
HGNC:HGNC:10404 PRIDE:H0YE27 Ensembl:ENST00000532746 Bgee:H0YE27
Uniprot:H0YE27
Length = 63
Score = 125 (49.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 41 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQII 75
W+PVTKLGRLV++ KI+SLE+IYL SLPIK+ ++
Sbjct: 2 WMPVTKLGRLVKDMKIKSLEEIYLFSLPIKQGTVV 36
Score = 37 (18.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 133 RGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGK 168
+G +++A+ + + GN G+PH + GK
Sbjct: 32 QGTVVMARPKLDKAK----GNLSGKPHLTKQEKKGK 63
>TIGR_CMR|NSE_0283 [details] [associations]
symbol:NSE_0283 "ribosomal protein S5" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CP000237
GenomeReviews:CP000237_GR KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B OMA:YNASKIL RefSeq:YP_506174.1
ProteinModelPortal:Q2GEC2 STRING:Q2GEC2 GeneID:3931470
KEGG:nse:NSE_0283 PATRIC:22680659
BioCyc:NSEN222891:GHFU-310-MONOMER Uniprot:Q2GEC2
Length = 172
Score = 137 (53.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 44/143 (30%), Positives = 67/143 (46%)
Query: 83 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLS 142
L + V+ I V K T+ G++ F+ +VGD G VG EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 143 VI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGI 200
+I P+R G T+ K G+ + + PAP G GIVA +K + G+
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGV 121
Query: 201 DDVFTSSRGSTKT---LGNFVKA 220
D+ S GS+ + + N +KA
Sbjct: 122 SDIIAKSYGSSTSGIVIRNAIKA 144
>TIGR_CMR|APH_0297 [details] [associations]
symbol:APH_0297 "ribosomal protein S5" species:212042
"Anaplasma phagocytophilum HZ" [GO:0000312 "plastid small ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 RefSeq:YP_504909.1 ProteinModelPortal:Q2GL42
SMR:Q2GL42 STRING:Q2GL42 GeneID:3931147 KEGG:aph:APH_0297
PATRIC:20949168 OMA:HNVVKAT ProtClustDB:PRK00550
BioCyc:APHA212042:GHPM-327-MONOMER HAMAP:MF_01307_B Uniprot:Q2GL42
Length = 173
Score = 131 (51.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 47/149 (31%), Positives = 70/149 (46%)
Query: 81 HKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAK 140
H L + ++ + V K + G+R F VVVGD G VG G+ EVA A A+ AK
Sbjct: 14 HDLSELLVSVRRVSKVVKGGRRFSFSVLVVVGDEKGRVGCGMGKHAEVAEAKIKAVNAAK 73
Query: 141 LSVIPVRRGYWGNKIGRPHTVPCKVTGK-CGSVTVRMVPAPRGAGIVAARVPKKVLQFAG 199
++I V Y + T+ VT K C S + + A G GI+A + V + G
Sbjct: 74 KNMIRV---Y----LRESRTLHHDVTAKFCASRVI-LRSAKVGTGIIAGGSVRAVFEVLG 125
Query: 200 IDDVFTSSRGSTK--TLGNFVKATFECLL 226
+ DV GS+ T+ V + F+ +L
Sbjct: 126 VQDVVAKIVGSSNAHTVIYAVFSAFKSML 154
>TIGR_CMR|ECH_0426 [details] [associations]
symbol:ECH_0426 "ribosomal protein S5" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_507244.1 ProteinModelPortal:Q2GH39
STRING:Q2GH39 GeneID:3927382 KEGG:ech:ECH_0426 PATRIC:20576329
BioCyc:ECHA205920:GJNR-427-MONOMER Uniprot:Q2GH39
Length = 174
Score = 122 (48.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/141 (29%), Positives = 62/141 (43%)
Query: 87 VMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPV 146
++ + V K + G+R F VV+GD G VG G+ EV+ A A+ A+ ++I V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKIKAVNAARKNMIRV 79
Query: 147 RRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTS 206
+ T+ V K S V + A G GI+A + + + G+ DV
Sbjct: 80 H-------LRESRTLHHDVKAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAK 132
Query: 207 SRGSTKTLGNFVKATFECLLK 227
S GS+ N V A F K
Sbjct: 133 SIGSSNP-HNVVYAVFAAFRK 152
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 272 235 0.00088 113 3 11 22 0.39 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 77
No. of states in DFA: 593 (63 KB)
Total size of DFA: 173 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.24u 0.14s 18.38t Elapsed: 00:00:01
Total cpu time: 18.25u 0.14s 18.39t Elapsed: 00:00:01
Start: Sat May 11 11:01:51 2013 End: Sat May 11 11:01:52 2013