BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024106
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum
GN=elmoA PE=1 SV=1
Length = 977
Score = 115 bits (288), Expect = 3e-25, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 65 QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 124
Q Q + R +V ++ EH L LW+ +P +L +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421
Query: 125 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ-MLDL 183
DFR G L+NL+Y A+N+ + F+ ++ Q DR EYP A AG+ +TF L + +
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 480
Query: 184 EAACFN-----------FTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMR 232
N T + F + AF+ +YC TF+++D W M
Sbjct: 481 GTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 540
Query: 233 ASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS 266
+YM F +M S + + +T LE P+
Sbjct: 541 GTYMHFQKIMSSVKNLI--------ITALESKPT 566
>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum
GN=elmoC PE=4 SV=1
Length = 618
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 106/192 (55%), Gaps = 10/192 (5%)
Query: 61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
+T Q + ++ L + Y+S+ P+H E L+ LW+ +P++E + S WK+ G+Q
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415
Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
DP+ DFRG G + L NL++L ++ Q++L + DR +YPFAVAG+NI+ ++ ++
Sbjct: 416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469
Query: 181 LDLEAACFN---FTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 237
+ ++ + A N+ AF+ LY + F L+DH W+ M A+YM
Sbjct: 470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529
Query: 238 FNTVMKSTRRQL 249
F V+K + QL
Sbjct: 530 FPLVIKKLKSQL 541
>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D
OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1
Length = 1267
Score = 94.4 bits (233), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 8/175 (4%)
Query: 69 LQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 128
+Q L + Y+ P H+ L LW+ FP++ + E W+ +G+Q KDPS+DFRG
Sbjct: 290 IQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQR-SHENWQIIGFQNKDPSSDFRG 348
Query: 129 GGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACF 188
G L++L+YLA+N F + L ++ + + YP+A +G+ +T L++ +
Sbjct: 349 MGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLVECVK----PI 402
Query: 189 NFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
N + ++G + L E+E+A + +YC+ ++ W A+YM F V +
Sbjct: 403 NISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456
>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum
GN=elmoB PE=4 SV=1
Length = 284
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Query: 78 VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 137
+ YD++ EH +L LW A PD +S++W +G+QG DP+TDFRG G + L+NL
Sbjct: 116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175
Query: 138 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTM 197
+Y + + +++L+ S YPFA+ G+NIT +++ ++D KP
Sbjct: 176 IYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLID----------KPH-- 220
Query: 198 VGATFLKFLSENESA---FDLLYCITFKLMDHQWLAMR-ASYMDFNTVMK 243
F + +N S F+ LY + F D + + + S M+FNT+ K
Sbjct: 221 ----FKIYFFKNGSTLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266
>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1
Length = 293
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 45 CVCAQRRESDPRPSFD--LTPAQEECLQRL----QLRIDV------AYDSSIPEHREALR 92
CV +E + P D + CL ++ QL +DV YDS +H + L
Sbjct: 73 CVEDIMKEKNINPEKDASFKICMKACLLQISGYKQLYLDVESVRKKPYDSDNLQHEKLLI 132
Query: 93 ALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLL 152
LWN P ++L+ IS+QW ++G+QG DP TDFRG G + L NL+Y + N+ +L
Sbjct: 133 KLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQIL 192
Query: 153 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACF---NFTVKPRTMVGATFLKFLSEN 209
+ + Y +A+ G+N+T M +L EA F NF TM
Sbjct: 193 SRSNHPKL--GYSYAIVGINLTEMAYSLLKSEALKFHLYNFVPGIPTM------------ 238
Query: 210 ESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQLERELL 254
F YC D W + S M FN + +++ LL
Sbjct: 239 -EHFHQFYCYLVYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLL 283
>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1
SV=1
Length = 293
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 49 QRRESDPRPSFDLTPAQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAA 98
+ + +P + CL ++ QL +DV YDS +H E L LWN
Sbjct: 79 KEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLL 138
Query: 99 FPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGD 158
P ++L IS+QW E+G+QG DP TDFRG G + L NL+Y + N+ +L +
Sbjct: 139 MPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHP 198
Query: 159 RSVWEYPFAVAGVNITFMLIQMLDLEAACFN-FTVKPRTMVGATFLKFLSENESAFD 214
+ Y +A+ G+N+T M +L EA F+ + + P F +F FD
Sbjct: 199 KL--GYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFD 253
>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus
GN=Elmo3 PE=2 SV=1
Length = 720
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 72 LQLRIDVAYDSSIPEHREALRALWNAAF-PDEE----------LRDLISEQWKEMGWQGK 120
L+ R+ D E RE L+AL AAF PD E R L +++++G+
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPDGESLGTGLSADRRRSLCVREFRKLGFSNS 352
Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
P+ D G ++L+N+LY +R+ P ++ + + E PFA + + +T +L
Sbjct: 353 SPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412
Query: 179 QMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 238
++L + C + F + +F L+C+ +L++ W MRA+ DF
Sbjct: 413 ELLHVGEPC--------SETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDF 464
Query: 239 NTVMKSTRRQLERELLLEDVT 259
+ VM+ R QL R L L+ +
Sbjct: 465 DKVMQVVREQLARTLALKPTS 485
>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2
SV=1
Length = 652
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 72 LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 120
L+ R+ D E RE L+AL AAF E R L + +++++G+
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPEGESVGAGLSADRRRSLCAREFRKLGFSNS 352
Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
+P+ D G ++L+N+LY +R P ++ + + E PFA + + +T +L
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412
Query: 179 QMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 238
+L + C + F + +F L+C++ +L++ W MRA+ DF
Sbjct: 413 DLLHVGEPC--------SETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQEDF 464
Query: 239 NTVMKSTRRQLERELLLE 256
+ VM+ R QL R L L+
Sbjct: 465 DKVMQVVREQLARTLALK 482
>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2
SV=1
Length = 293
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 80 YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 139
YDS+ +H + L LW+ P ++L IS+QW ++G+QG DP TDFRG G + L NL+Y
Sbjct: 120 YDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179
Query: 140 LARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEA---ACFNFTVKPRT 196
+ N+ +L + + Y +A+ G+N+T M +L EA +NF T
Sbjct: 180 FSENYTSEAHQILSRSNHPK--LGYSYAIVGINLTEMAYSLLKSEALKLHLYNFVPGVPT 237
Query: 197 MVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 239
M F YC D WL S M FN
Sbjct: 238 M-------------EHFHQFYCYLVYEFDKFWLEEEPESIMYFN 268
>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3
PE=2 SV=3
Length = 720
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 72 LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 120
L+ R+ D E RE L+ L AAF E R L + +++++G+
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQVLRQAAFEVEGESSGAGLSADRRRSLCAREFRKLGFSNS 352
Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
+P+ D G ++L+N+LY +RN P ++ + + E PFA + +T +L
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARGSIQLTVLLC 412
Query: 179 QMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 238
++L + C + F + +F L+C+ +L++ W MRA+ DF
Sbjct: 413 ELLRVGEPC--------SETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDF 464
Query: 239 NTVMKSTRRQLERELLLEDVT 259
+ VM+ R QL R L L+ +
Sbjct: 465 DKVMQVVREQLARTLALKPTS 485
>sp|Q8BYZ7|ELMO3_MOUSE Engulfment and cell motility protein 3 OS=Mus musculus GN=Elmo3
PE=1 SV=2
Length = 720
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 72 LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 120
L+ R+ D E R+ L+AL AAF E R L +++++G+
Sbjct: 293 LEPRMRTPLDPYSQEQRDQLQALRQAAFEPEGESLGTGLSADRRRSLCVREFRKLGFSNS 352
Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
+P+ D G ++L+N+LY +R+ P ++ + + E PFA + + +T +L
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTALLC 412
Query: 179 QMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 238
++L + C + F + +F L+C+ +L++ W MRA+ DF
Sbjct: 413 ELLRVGEPC--------SETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDF 464
Query: 239 NTVMKSTRRQLERELLLEDVT 259
+ VM+ R QL R L L+ +
Sbjct: 465 DKVMQVVREQLARTLALKPTS 485
>sp|Q0IIE6|ELMD1_BOVIN ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1
Length = 326
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 32/194 (16%)
Query: 79 AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 138
+YDS P+H E L LW P+ L IS+QW E+G+QG DP TDFRG G + L NL
Sbjct: 126 SYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQ 185
Query: 139 YLARNFPKSFQDLL------RKQEGDRSVWE---------YPFAVAGVNITFMLIQML-- 181
Y A + Q +L + + ++ WE Y FA+ G+NIT + +L
Sbjct: 186 YFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVS 245
Query: 182 -DLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 239
L+ +N + T+ S F +C W+ M+FN
Sbjct: 246 GALKTHFYNIAPEAPTL-------------SHFQQTFCYLMHEFHKFWIEEDPMDIMEFN 292
Query: 240 TVMKSTRRQLEREL 253
V + R+++ ++L
Sbjct: 293 RVREKFRKRIIKQL 306
>sp|Q5NVD7|ELMD1_PONAB ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2
SV=1
Length = 326
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 80 YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 139
YDS P+H E L LW P+ L IS+QW E+G+QG DP TDFRG G + L NL Y
Sbjct: 127 YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQY 186
Query: 140 LARNFPKSFQDLL------RKQEGDRSVWE---------YPFAVAGVNITFMLIQML--- 181
A + Q +L + + ++ WE Y FA+ G+NIT + +L
Sbjct: 187 FAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSG 246
Query: 182 DLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNT 240
L+ +N + T+ S F +C W+ M+FN
Sbjct: 247 ALKTHFYNIAPEAPTL-------------SHFQQTFCYLMHEFHKFWIEEDPMDIMEFNR 293
Query: 241 VMKSTRRQLEREL 253
V + R+++ ++L
Sbjct: 294 VREKFRKRIIKQL 306
>sp|Q3V1U8|ELMD1_MOUSE ELMO domain-containing protein 1 OS=Mus musculus GN=Elmod1 PE=2
SV=2
Length = 326
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 34/194 (17%)
Query: 80 YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 139
YDS P+H E L LW P+ L +S+QW E+G+QG DP TDFRG G + L NL Y
Sbjct: 127 YDSDNPQHEEMLLKLWELLKPNTPLESRVSKQWCEIGFQGDDPKTDFRGMGLLGLYNLQY 186
Query: 140 LARNFPKSFQDLL----------------RKQEGDRSVWEYPFAVAGVNITFMLIQML-- 181
A Q +L K++ D+++ Y FA+ G+NIT + +L
Sbjct: 187 FAERDATVAQQVLSDSVHPKCSKFSKIEWEKKKMDKAI-GYSFAIVGINITDLAYNLLVS 245
Query: 182 -DLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 239
L+ +N + T+ S F +C W+ M+FN
Sbjct: 246 GALKTHFYNIAPEAPTL-------------SHFQQTFCYLMHEFHKFWIEEDPMDIMEFN 292
Query: 240 TVMKSTRRQLEREL 253
V + R+++ ++L
Sbjct: 293 RVREKFRKRIIKQL 306
>sp|Q8N336|ELMD1_HUMAN ELMO domain-containing protein 1 OS=Homo sapiens GN=ELMOD1 PE=2
SV=3
Length = 334
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 79 AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 138
AYDS P+H E L LW P+ L IS+QW E+G+QG DP TDFRG G + L NL
Sbjct: 126 AYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQ 185
Query: 139 YLARNFPKSFQDLLR-----------KQE---GDRSVWE---------YPFAVAGVNITF 175
Y A + Q +L K+E ++ WE Y FA+ G+NIT
Sbjct: 186 YFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVGINITD 245
Query: 176 MLIQML---DLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMR 232
+ +L L+ +N + T+ S F +C W+
Sbjct: 246 LAYNLLVSGALKTHFYNIAPEAPTL-------------SHFQQTFCYLMHEFHKFWIEED 292
Query: 233 A-SYMDFNTVMKSTRRQLEREL 253
M+FN V + R+++ ++L
Sbjct: 293 PMDIMEFNRVREKFRKRIIKQL 314
>sp|Q8BPU7|ELMO1_MOUSE Engulfment and cell motility protein 1 OS=Mus musculus GN=Elmo1
PE=1 SV=2
Length = 727
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 96 NAAFPDEELRDLISEQWKEMGWQGK-DPSTDFRGG--GFISLENLLYLARNFPKSFQDLL 152
N++ E+ + + + +K++G+ +P+ DF G ++L+N+LY A++ ++ ++
Sbjct: 340 NSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIV 399
Query: 153 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESA 212
+ E PF + + +T ML ++L + P F + + S
Sbjct: 400 LENSSREDKHECPFGRSSIELTKMLCEILKVGEL-------PSETCNDFHPMFFTHDRS- 451
Query: 213 FDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREL 253
F+ +CI +L++ W MRA+ DFN VM+ + Q+ R L
Sbjct: 452 FEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRAL 492
>sp|Q92556|ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1
PE=1 SV=2
Length = 727
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 96 NAAFPDEELRDLISEQWKEMGWQGK-DPSTDFRGG--GFISLENLLYLARNFPKSFQDLL 152
N++ E+ + + + +K++G+ +P+ DF G ++L+N+LY A++ ++ ++
Sbjct: 340 NSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIV 399
Query: 153 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESA 212
+ E PF + + +T ML ++L + P F + + S
Sbjct: 400 LENSSREDKHECPFGRSSIELTKMLCEILKVGEL-------PSETCNDFHPMFFTHDRS- 451
Query: 213 FDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREL 253
F+ +CI +L++ W MRA+ DFN VM+ + Q+ R L
Sbjct: 452 FEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRAL 492
>sp|A4FUD6|ELMO2_BOVIN Engulfment and cell motility protein 2 OS=Bos taurus GN=ELMO2 PE=2
SV=1
Length = 720
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 102 EELRDLISEQWKEMGWQGK-DPSTDFRGG--GFISLENLLYLARNFPKSFQDLLRKQEGD 158
E+ + + ++ +K +G+ +P+ DF G ++L+N+LYLA+ ++ ++ +
Sbjct: 339 EKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSR 398
Query: 159 RSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYC 218
E PF + + +T ML ++L + + R F ++ AF+ L+
Sbjct: 399 EDKHECPFGRSAIELTKMLCEILQVG----ELPNEGRNDYHPMFFT----HDRAFEELFG 450
Query: 219 ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREL 253
I +L++ W MRA+ DFN VM+ R Q+ R L
Sbjct: 451 ICIQLLNKTWKEMRATAEDFNKVMQVVREQITRAL 485
>sp|Q96JJ3|ELMO2_HUMAN Engulfment and cell motility protein 2 OS=Homo sapiens GN=ELMO2
PE=1 SV=2
Length = 720
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 102 EELRDLISEQWKEMGWQGK-DPSTDFRGG--GFISLENLLYLARNFPKSFQDLLRKQEGD 158
E+ + + ++ +K +G+ +P+ DF G ++L+N+LYLA+ ++ ++ +
Sbjct: 339 EKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSR 398
Query: 159 RSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYC 218
E PF + + +T ML ++L + + R F ++ AF+ L+
Sbjct: 399 EDKHECPFGRSAIELTKMLCEILQVG----ELPNEGRNDYHPMFFT----HDRAFEELFG 450
Query: 219 ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREL 253
I +L++ W MRA+ DFN VM+ R Q+ R L
Sbjct: 451 ICIQLLNKTWKEMRATAEDFNKVMQVVREQITRAL 485
>sp|Q5RCC1|ELMO2_PONAB Engulfment and cell motility protein 2 OS=Pongo abelii GN=ELMO2
PE=2 SV=1
Length = 720
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 102 EELRDLISEQWKEMGWQGK-DPSTDFRGG--GFISLENLLYLARNFPKSFQDLLRKQEGD 158
E+ + + ++ +K +G+ +P+ DF G ++L+N+LYLA+ ++ ++ +
Sbjct: 339 EKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSR 398
Query: 159 RSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYC 218
E PF + + +T ML ++L + + R F ++ AF+ L+
Sbjct: 399 EDKHECPFGRSAIELTKMLCEILQVG----ELPNEGRNDYHPMFFT----HDRAFEELFG 450
Query: 219 ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREL 253
I +L++ W MRA+ DFN VM+ R Q+ R L
Sbjct: 451 ICIQLLNKTWKEMRATAEDFNKVMQVVREQITRAL 485
>sp|Q8BHL5|ELMO2_MOUSE Engulfment and cell motility protein 2 OS=Mus musculus GN=Elmo2
PE=1 SV=1
Length = 732
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 102 EELRDLISEQWKEMGWQGK-DPSTDFRGG--GFISLENLLYLARNFPKSFQDLLRKQEGD 158
E+ + + ++ +K +G+ +P+ DF G ++L+N+LYLA+ ++ ++ +
Sbjct: 351 EKRKAMYTKDYKMLGFTNHINPALDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSR 410
Query: 159 RSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYC 218
E PF + + +T ML ++L + + R F ++ AF+ L+
Sbjct: 411 EDKHECPFGRSAIELTKMLCEILQVG----ELPNEGRNDYHPMFFT----HDRAFEELFG 462
Query: 219 ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREL 253
I +L++ W MRA+ DFN VM+ R Q+ R L
Sbjct: 463 ICIQLLNKTWKEMRATAEDFNKVMQVVREQITRAL 497
>sp|Q96FG2|ELMD3_HUMAN ELMO domain-containing protein 3 OS=Homo sapiens GN=ELMOD3 PE=2
SV=2
Length = 381
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 81 DSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYL 140
DS P H L+ ++ + L W+++G+QG +P+TD RG GF++L +LLYL
Sbjct: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224
Query: 141 ---ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTM 197
++ P + Q++ R + ++PF + VNIT + IQ L E C + +
Sbjct: 225 VMDSKTLPMA-QEIFRLSR--HHIQQFPFCLMSVNITHIAIQALREE--CLSRECNRQQK 279
Query: 198 VGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
V F Y TF + H W R + D V+K
Sbjct: 280 VIPVVNSF-----------YAATFLHLAHVWRTQRKTISDSGFVLK 314
>sp|Q91YP6|ELMD3_MOUSE ELMO domain-containing protein 3 OS=Mus musculus GN=Elmod3 PE=2
SV=1
Length = 381
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 81 DSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYL 140
DS P H L+ ++ + L + W+++G+QG +P+TD RG GF++L +LLYL
Sbjct: 165 DSQNPTHGRVLQTIYKKLTGSKFDCALHGDHWEDLGFQGANPATDLRGAGFLALLHLLYL 224
Query: 141 ARNFPKSF---QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTM 197
+ K+F Q++ R + ++PF + VNIT + IQ L E C + R
Sbjct: 225 VMD-SKTFLMAQEIFRLSH--HHIQQFPFCLMSVNITRIAIQALREE--CLSRECNRRQK 279
Query: 198 VGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
V F Y TF + W + + +D V+K
Sbjct: 280 VIPVVNSF-----------YAATFLHLARVWRTQQKTILDSGFVLK 314
>sp|Q5XIQ2|ELMD3_RAT ELMO domain-containing protein 3 OS=Rattus norvegicus GN=Elmod3
PE=2 SV=1
Length = 356
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 81 DSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYL 140
DS P H L+ ++ + L + W+++G+QG +P+TD RG GF++L +LLYL
Sbjct: 165 DSQNPTHGRVLQTIYKKLTGSKFDCALHGDHWEDLGFQGANPATDLRGTGFLALLHLLYL 224
Query: 141 ARNFPKSFQDLLRKQE----GDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRT 196
+ + LL QE + ++PF + VNIT + IQ L E C + R
Sbjct: 225 VMD----SKTLLMAQEILRLSHHHIQQFPFCLMSVNITRIAIQALREE--CLSRECNRRR 278
Query: 197 MVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
V F Y TF + W + +D V+K
Sbjct: 279 KVIPVVNSF-----------YAATFLHLARMWRTQHNTILDSGFVLK 314
>sp|Q58DT5|ELMD3_BOVIN ELMO domain-containing protein 3 OS=Bos taurus GN=ELMOD3 PE=2 SV=1
Length = 381
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 81 DSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGF--------- 131
DS P H L+ ++ + L + W+++G+QG +P+TD RG GF
Sbjct: 165 DSQDPMHGRVLQTIYKKLTGSKFDCALHGDHWEDLGFQGTNPATDLRGAGFLALLHLLYL 224
Query: 132 ISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFT 191
+ L +AR ++LR + ++PF + VNIT + IQ L E C +
Sbjct: 225 VMDSKTLLMAR-------EILRLSR--HHIQQFPFCLMSVNITRIAIQALREE--CLSRE 273
Query: 192 VKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
+ V F Y TF + H W + D V+K
Sbjct: 274 CNRQQKVIPVVNSF-----------YAATFLRLAHIWRTQHKTISDSGFVLK 314
>sp|Q54WH5|ELMOE_DICDI ELMO domain-containing protein E OS=Dictyostelium discoideum
GN=elmoE PE=4 SV=1
Length = 1677
Score = 48.1 bits (113), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 65 QEECLQRLQ-LRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPS 123
+E +QRL + +D + H+ L LW +A + SE W +G++ +P
Sbjct: 475 KELHMQRLHPINVD-----KVLSHQILLSDLWGSALSSYPFGGINSEHWLLLGFRSSNPM 529
Query: 124 TDFRGGGFISLENLLYLARNFPKSFQDLLRKQ 155
DF+ G ++L NL Y ++ + FQ LL Q
Sbjct: 530 EDFKNTGVLALRNLSYFSKQHLQPFQSLLLTQ 561
Score = 34.3 bits (77), Expect = 1.00, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 164 YPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKL 223
YP A +++T+ L + F + + ++ + FD ++ TF L
Sbjct: 628 YPLATVAISLTYTLSNI-------FRIGRINDSPIDSSIWDIAFSGSNWFDEIFVTTFNL 680
Query: 224 MDHQWLAMRASYMDFNTVMKSTRRQLER 251
+ W + SY DF V+ TR +E+
Sbjct: 681 FESLWHSEAHSYSDFPQVISHTREIIEK 708
>sp|Q09292|ELMD3_CAEEL ELMO domain-containing protein C56G7.3 OS=Caenorhabditis elegans
GN=C56G7.3 PE=4 SV=2
Length = 322
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 20/150 (13%)
Query: 108 ISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQD---LLRKQEGDRSVWEY 164
+ W +G+Q P TDFRG G + L + + P + LL E + ++
Sbjct: 172 VGAHWVTVGFQSATPHTDFRGCGVLGLLQMHTFTQRVPANLLRAIVLLATTEPN----DF 227
Query: 165 PFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLM 224
P AV +NIT +L+ L + A NF + + F S ++ +C +K
Sbjct: 228 PLAVVSINITSILLTQLK-KGALDNFGNEIEGL-----YPFFSALHASAMCRFCSIYK-- 279
Query: 225 DHQWLAMRASYMDFNTVMKSTRRQLERELL 254
+ + + + T+ RQLE+ L
Sbjct: 280 -----SQKCTLANTQTIFSEITRQLEKSPL 304
>sp|P06839|RAD3_YEAST DNA repair helicase RAD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD3 PE=1 SV=1
Length = 778
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 74 LRIDVAYDSSIPEHREAL---RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGG 130
L + +AY PEHR+ + R + EL +L+ + KE+G+Q DFRG G
Sbjct: 53 LSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQ-----EDFRGLG 107
Query: 131 FISLENL 137
S +NL
Sbjct: 108 LTSRKNL 114
>sp|Q6NZP1|ZRAB3_MOUSE DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus
GN=Zranb3 PE=1 SV=1
Length = 1069
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 70 QRLQLRIDVAYDSSIPEHREAL-RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 128
Q L LR+ A S HR++L A W A P E+L +++ + WQ + G
Sbjct: 963 QELFLRMRDAPKS----HRKSLLNAAWTAKLPLEQLNEMLRNPGEGHFWQVDHIRPVYEG 1018
Query: 129 GGFISLENLLYL 140
GG SL+NL L
Sbjct: 1019 GGQCSLDNLQTL 1030
>sp|Q5FWF4|ZRAB3_HUMAN DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens
GN=ZRANB3 PE=1 SV=2
Length = 1079
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 81 DSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYL 140
D+ + + L A W + P E+L ++I + WQ + GGG SL+NL L
Sbjct: 981 DAPKSQRKNLLYATWTSKLPLEQLNEMIRNPGEGHFWQVDHIKPVYGGGGQCSLDNLQTL 1040
>sp|Q92503|S14L1_HUMAN SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2
Length = 715
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 60 DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQ--WKEMG- 116
DLTP QE CL RL+ + + IP+ LR L F ++ R+++ + W++
Sbjct: 250 DLTPLQESCLIRLRQWLQETHKGKIPKDEHILRFLRARDFNIDKAREIMCQSLTWRKQHQ 309
Query: 117 -------WQGKDPSTDFRGGGF 131
W D+ GG+
Sbjct: 310 VDYILETWTPPQVLQDYYAGGW 331
>sp|Q99N95|RM03_MOUSE 39S ribosomal protein L3, mitochondrial OS=Mus musculus GN=Mrpl3
PE=2 SV=1
Length = 348
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 62 TPAQEECLQRLQLRIDVAYDSSIPEHREALRAL-WNAAFPDEELRDLISEQWKEMGWQGK 120
P + CL +++ DS++P ++++ + L + FPD + +L + + E WQ
Sbjct: 289 VPGHKNCLVKIK-------DSTLPAYKDSCKNLPFPTYFPDGDEEELPEDLFDESVWQPS 341
Query: 121 DPSTDF 126
+PS F
Sbjct: 342 EPSITF 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,788,041
Number of Sequences: 539616
Number of extensions: 4024804
Number of successful extensions: 8242
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 8184
Number of HSP's gapped (non-prelim): 41
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)