Query 024106
Match_columns 272
No_of_seqs 165 out of 396
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 09:01:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024106.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024106hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2998 Uncharacterized conser 100.0 5.6E-66 1.2E-70 467.5 17.0 260 1-272 37-302 (302)
2 PF04727 ELMO_CED12: ELMO/CED- 100.0 5.6E-49 1.2E-53 336.3 13.5 168 68-243 2-170 (170)
3 KOG2999 Regulator of Rac1, req 100.0 2.2E-32 4.7E-37 264.5 11.4 198 59-265 276-487 (713)
4 KOG4404 Tandem pore domain K+ 33.4 50 0.0011 31.6 3.6 86 62-153 35-142 (350)
5 PF08262 Lem_TRP: Leucophaea m 32.4 18 0.00039 16.9 0.3 6 114-119 3-8 (10)
6 PF03735 ENT: ENT domain; Int 29.1 82 0.0018 23.5 3.5 31 61-95 26-56 (73)
7 PHA02819 hypothetical protein; 24.2 1.1E+02 0.0025 22.7 3.4 32 214-251 2-33 (71)
8 PF11588 DUF3243: Protein of u 23.5 29 0.00064 26.5 0.2 27 74-101 40-66 (81)
9 PHA02650 hypothetical protein; 20.6 1.4E+02 0.003 22.7 3.3 33 214-252 2-34 (81)
10 PHA02975 hypothetical protein; 20.5 1.5E+02 0.0032 22.0 3.3 32 214-251 2-33 (69)
11 PHA02844 putative transmembran 20.4 1.4E+02 0.0031 22.4 3.3 33 214-252 2-34 (75)
No 1
>KOG2998 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=5.6e-66 Score=467.52 Aligned_cols=260 Identities=51% Similarity=0.804 Sum_probs=242.9
Q ss_pred CCCCCCceeEEe-ecccCCCCCCCCCCCccchhccchhhhcc-----cccccccccCCCCCCCCCCCCHHHHHHHHHHHh
Q 024106 1 MDERGGSFVAVR-RISQGLDRGNTCHSTSAEVVAGSAAWLGR-----GLSCVCAQRRESDPRPSFDLTPAQEECLQRLQL 74 (272)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~c~~~~~~~~~~~~~~~L~~~Q~~~l~~L~~ 74 (272)
|++..|..++|+ +.|.+......-+.++.+...|+.+|+++ ++.|.+...+......|..+.+.+.+.++.+++
T Consensus 37 ~~~~~g~~ra~~~e~sl~~~~~~~~~~ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~ 116 (302)
T KOG2998|consen 37 TDAYEGASRAVRTETSLGQEKPLLGSTASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEE 116 (302)
T ss_pred hcCCCCCcceeecchhhhhhhhhhhcccccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHH
Confidence 578899999999 78888888888888899999999999999 899999999999999999999999999999999
Q ss_pred hhccccCCCCHHHHHHHHHHHHHhCCCcccccchhhhHhHhccCCCCCCCCCCcchhhhHhhHHHHHhhCcHHHHHHHHh
Q 024106 75 RIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRK 154 (272)
Q Consensus 75 ~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQg~dP~tDFRg~G~LgL~~LlyF~~~~~~~~~~ll~~ 154 (272)
++++|||.+|++|+++|.+||+.++|+++++++++++|++|||||+||+|||||+|+|||+||+||+++||+.+++++.+
T Consensus 117 ~~~~~yDs~n~~H~e~L~~lwk~~~p~~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~ 196 (302)
T KOG2998|consen 117 LRQEPYDSDNPDHEELLLDLWKLLYPDKELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLK 196 (302)
T ss_pred HHhccCCCCChhHHHHHHHHHHHhCCCCccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCcchHHHHHHHHHHHHHHHhhhhhccccccCCccccccchhhccccchhhHHHHHHHHHHHHHHHHHhCCCC
Q 024106 155 QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRAS 234 (272)
Q Consensus 155 q~s~~~~~~yPfAvasINiT~~L~~~L~~~~~~~~~~~k~~~~~~~~F~~ll~~~~~~F~eLy~~~f~~f~~~W~~~~at 234 (272)
|. ++.|+|||||||||||+|++++|++++. .++.+....+| +++.+|+.|||++|..||++|+++++|
T Consensus 197 s~--~~r~eYpfAVvgINIT~m~~qmL~~eal-----~~~~~~~~~~~-----~~~~~F~~lYc~af~~~d~~Wl~~~~s 264 (302)
T KOG2998|consen 197 SR--HPRWEYPFAVVGINITFMAIQMLDLEAL-----KKHFNNIVKVF-----ETEPAFDLLYCYAFLEFDKQWLEQRAT 264 (302)
T ss_pred cC--CCccCCceEEEeecHHHHHHHHHHhhhc-----ccccccccccc-----ccHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 75 5669999999999999999999999984 24444444444 788899999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHhhcccCcCCCCCCCccccccC
Q 024106 235 YMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272 (272)
Q Consensus 235 ~mdF~~Vl~~~r~qL~r~L~~~~v~~v~d~~~~~~~~~ 272 (272)
|||||.|++++|.|++++|++.|+..++|+|+|++|.+
T Consensus 265 imefn~Vlk~~~~qler~L~~~d~~~~~~lp~~~~L~~ 302 (302)
T KOG2998|consen 265 IMEFNTVLKSFRRQLERELSLDDVLLITDLPAFNLLLQ 302 (302)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhhhcC
Confidence 99999999999999999999999999999999999964
No 2
>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2. ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton
Probab=100.00 E-value=5.6e-49 Score=336.33 Aligned_cols=168 Identities=43% Similarity=0.761 Sum_probs=150.2
Q ss_pred HHHHHHhhhccccCCCCHHHHHHHHHHHHHhCCCcccccchhhhHhHhccCCCCCCCCCCcchhhhHhhHHHHHhhCcHH
Q 024106 68 CLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKS 147 (272)
Q Consensus 68 ~l~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQg~dP~tDFRg~G~LgL~~LlyF~~~~~~~ 147 (272)
.|+.|++++++|||++|++|+++|++||++++++.+.+++.+++|++|||||+||+|||||+|+|||+||+||+++||+.
T Consensus 2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~ 81 (170)
T PF04727_consen 2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE 81 (170)
T ss_pred hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence 57889999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCcchHHHHHHHHHHHHHHHhhhhhccccccCCccccccchhhc-cccchhhHHHHHHHHHHHHHH
Q 024106 148 FQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKF-LSENESAFDLLYCITFKLMDH 226 (272)
Q Consensus 148 ~~~ll~~q~s~~~~~~yPfAvasINiT~~L~~~L~~~~~~~~~~~k~~~~~~~~F~~l-l~~~~~~F~eLy~~~f~~f~~ 226 (272)
+++|+.++.++.+..+||||+||||||.+|+++|+++.. .+. ....+... +.+.+.+|++|||++|..|++
T Consensus 82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~------~~~--~~~~~~~~~~~~~~~~f~elf~~~f~~f~~ 153 (170)
T PF04727_consen 82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGAL------DSE--FYKRINFLSFFSSLEAFEELFCACFQLFDR 153 (170)
T ss_pred HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhccc------CHH--HhhcccccccCccHHHHHHHHHHHHHHHHH
Confidence 999999988766667999999999999999999999762 111 11122222 556788999999999999999
Q ss_pred HHHhCCCCcccHHHHHH
Q 024106 227 QWLAMRASYMDFNTVMK 243 (272)
Q Consensus 227 ~W~~~~at~mdF~~Vl~ 243 (272)
+|+++++++|||++|++
T Consensus 154 ~W~~~~at~~dF~~V~~ 170 (170)
T PF04727_consen 154 TWKEMNATIMDFNKVLK 170 (170)
T ss_pred HHccCCCCHHHHHhhcC
Confidence 99999999999999975
No 3
>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-32 Score=264.45 Aligned_cols=198 Identities=27% Similarity=0.505 Sum_probs=181.6
Q ss_pred CCCCHHHHHHHHHHHhhhccccCCCCHHHHHHHHHHHHHhCCCccc-----------ccchhhhHhHhccCC-CCCCCCC
Q 024106 59 FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEEL-----------RDLISEQWKEMGWQG-KDPSTDF 126 (272)
Q Consensus 59 ~~L~~~Q~~~l~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~-----------~~~~~~~Wk~lGFQg-~dP~tDF 126 (272)
.+|+.+|...+..+..|+.++.|+.+.+.++.++++-..+|.++.. .....+..|++||.. .||+.||
T Consensus 276 ~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~df 355 (713)
T KOG2999|consen 276 IQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQDF 355 (713)
T ss_pred HHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHHhc
Confidence 5899999999999999999999999999999999999999976422 245678999999999 8999999
Q ss_pred C--cchhhhHhhHHHHHhhCcHHHHHHHHhhcCCCCCCCcchHHHHHHHHHHHHHHHhhhhhccccccCCccccccchhh
Q 024106 127 R--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLK 204 (272)
Q Consensus 127 R--g~G~LgL~~LlyF~~~~~~~~~~ll~~q~s~~~~~~yPfAvasINiT~~L~~~L~~~~~~~~~~~k~~~~~~~~F~~ 204 (272)
- .+|+|+|.||+||+++||+.+.+++.+++++.++++|||+..+|.+|.|||++|++++. ++.....|.|
T Consensus 356 ~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge~--------p~E~~~df~p 427 (713)
T KOG2999|consen 356 GETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGEP--------PDELDRDFIP 427 (713)
T ss_pred ccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCCC--------chhhcCccce
Confidence 6 78999999999999999999999999999999999999999999999999999999983 3445567999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhhcccCcCCCCCCC
Q 024106 205 FLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLP 265 (272)
Q Consensus 205 ll~~~~~~F~eLy~~~f~~f~~~W~~~~at~mdF~~Vl~~~r~qL~r~L~~~~v~~v~d~~ 265 (272)
+||.++..|+++||+|.++|+++|++|+||-.||++|+++||+||.|+|..+ .++++++-
T Consensus 428 mfFthd~~Fee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~k-p~sld~fk 487 (713)
T KOG2999|consen 428 MFFTHDTPFEELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRK-PQSLDQFK 487 (713)
T ss_pred eeecCCCcHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccC-CccHHHHH
Confidence 9999999999999999999999999999999999999999999999999876 77766543
No 4
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=33.40 E-value=50 Score=31.62 Aligned_cols=86 Identities=23% Similarity=0.334 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHhhhccccCCCCHHHHHHHHHHHHHhCCCcccccchhhhHh-------------HhccCCCCCCCCCC-
Q 024106 62 TPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWK-------------EMGWQGKDPSTDFR- 127 (272)
Q Consensus 62 ~~~Q~~~l~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk-------------~lGFQg~dP~tDFR- 127 (272)
...+.++++.-+...+.+|+-++++-+.+..-+-+. .| ...+.+|+ .|||-.+.|+||--
T Consensus 35 E~~~r~~l~~~~~~~~~kyn~s~~d~r~~er~i~~s-~p-----h~ag~qWkF~GaFYFa~TVItTIGyGhstP~T~~GK 108 (350)
T KOG4404|consen 35 EARERERLERRLANLKRKYNLSEEDYRELERVILKS-EP-----HKAGPQWKFAGAFYFATTVITTIGYGHSTPSTDGGK 108 (350)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhc-Cc-----cccccccccCcceEEEEEEEeeeccCCCCCCCcCce
Confidence 345677888888889999998888776665544333 33 34567886 58999999999943
Q ss_pred ----cchhhhHhh-HHH---HHhhCcHHHHHHHH
Q 024106 128 ----GGGFISLEN-LLY---LARNFPKSFQDLLR 153 (272)
Q Consensus 128 ----g~G~LgL~~-Lly---F~~~~~~~~~~ll~ 153 (272)
.-|++|... |+. |-|+-......++.
T Consensus 109 ~Fcm~Yal~Gipl~lvmFqs~gERlnt~~ayil~ 142 (350)
T KOG4404|consen 109 AFCMFYALVGIPLTLVMFQSIGERLNTFVAYILR 142 (350)
T ss_pred ehhhhHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 446766655 333 33444444444444
No 5
>PF08262 Lem_TRP: Leucophaea maderae tachykinin-related peptide ; InterPro: IPR013206 These peptides are designated Leucophaea maderae (Madeira cockroach) tachykinin-related peptides (Lem TRPs). Some were isolated from the midgut of L. maderae, whereas others appear to be brain specific. The Lem TRPs of the brain are myotropic and induce increases in the amplitude and frequency of spontaneous contractions and tonus of hindgut muscle in L. maderae []. They were also isolated from brain-corpora, cardiaca-corpora, allata-suboesophageal ganglion extracts of Locusta migratoria (Migratory locust). They stimulate visceral muscle contractions of the oviduct and the foregut of L. migratoria [].
Probab=32.40 E-value=18 Score=16.86 Aligned_cols=6 Identities=50% Similarity=1.248 Sum_probs=4.6
Q ss_pred HhccCC
Q 024106 114 EMGWQG 119 (272)
Q Consensus 114 ~lGFQg 119 (272)
.+||||
T Consensus 3 smgf~g 8 (10)
T PF08262_consen 3 SMGFHG 8 (10)
T ss_pred cccccc
Confidence 478887
No 6
>PF03735 ENT: ENT domain; InterPro: IPR005491 This entry represents a protein regulator which is able to repress transcription, possibly via its interaction with a multi protein chromatin re-modeling complex that modifies the chromatin. Its interaction with BRCA2 suggests that it may play a central role in the DNA repair function of BRCA2 []. ; PDB: 1UZ3_B 1UTU_B 2FMM_E.
Probab=29.12 E-value=82 Score=23.45 Aligned_cols=31 Identities=35% Similarity=0.449 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHHHhhhccccCCCCHHHHHHHHHHH
Q 024106 61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALW 95 (272)
Q Consensus 61 L~~~Q~~~l~~L~~~~~~~~d~~~~~H~~~L~~Lw 95 (272)
|+..++..|..|++..++ +|.+|...|..+-
T Consensus 26 lsweke~lLt~Lr~~L~I----S~e~H~~~l~~~~ 56 (73)
T PF03735_consen 26 LSWEKEKLLTELRKELNI----SDEEHREELRRAV 56 (73)
T ss_dssp --HHHHHHHHHHHHHTT------HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC----CcHHHHHHHHHHh
Confidence 899999999999887765 5888988888763
No 7
>PHA02819 hypothetical protein; Provisional
Probab=24.22 E-value=1.1e+02 Score=22.67 Aligned_cols=32 Identities=31% Similarity=0.507 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHH
Q 024106 214 DLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLER 251 (272)
Q Consensus 214 ~eLy~~~f~~f~~~W~~~~at~mdF~~Vl~~~r~qL~r 251 (272)
++||++.|=.| |..+-.||+..++.+|+-|..
T Consensus 2 DKLYaaiFGvF------msS~DdDFnnFI~VVksVLtd 33 (71)
T PHA02819 2 DKLYSAIFGVF------MSSSDDDFNNFINVVKSVLNN 33 (71)
T ss_pred hhHHHHHHHhh------hCCchhHHHHHHHHHHHHHcC
Confidence 57898888887 566778999999999887765
No 8
>PF11588 DUF3243: Protein of unknown function (DUF3243); InterPro: IPR021637 This family of proteins with unknown function includes uncharacterised proteins ymfJ and yflH. The family appears to be restricted to Firmicutes.; PDB: 3D0W_B.
Probab=23.50 E-value=29 Score=26.46 Aligned_cols=27 Identities=26% Similarity=0.422 Sum_probs=15.2
Q ss_pred hhhccccCCCCHHHHHHHHHHHHHhCCC
Q 024106 74 LRIDVAYDSSIPEHREALRALWNAAFPD 101 (272)
Q Consensus 74 ~~~~~~~d~~~~~H~~~L~~Lw~~~~~~ 101 (272)
..+...+||.|++ +++|++||+.+..+
T Consensus 40 dyLA~~vdP~N~E-erlLkELW~va~e~ 66 (81)
T PF11588_consen 40 DYLAKNVDPKNPE-ERLLKELWDVADEE 66 (81)
T ss_dssp HHHHT-----SHH-HHHHHHHHHC--HH
T ss_pred HHHHhcCCCCCHH-HHHHHHHHHhCCHH
Confidence 4455678999985 68999999987544
No 9
>PHA02650 hypothetical protein; Provisional
Probab=20.57 E-value=1.4e+02 Score=22.75 Aligned_cols=33 Identities=30% Similarity=0.509 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHh
Q 024106 214 DLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERE 252 (272)
Q Consensus 214 ~eLy~~~f~~f~~~W~~~~at~mdF~~Vl~~~r~qL~r~ 252 (272)
++||++.|=.| |..+-.||+..++.+|+-|...
T Consensus 2 DKLYaaiFGVF------msS~DdDFnnFI~VVkSVLtD~ 34 (81)
T PHA02650 2 DKLYAAIFGVF------MSSTDDDFNNFIDVVKSVLSDE 34 (81)
T ss_pred hhHHHHHHhhh------cCCcHHHHHHHHHHHHHHHcCC
Confidence 57888888887 5667789999999998877543
No 10
>PHA02975 hypothetical protein; Provisional
Probab=20.45 E-value=1.5e+02 Score=21.97 Aligned_cols=32 Identities=16% Similarity=0.340 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHH
Q 024106 214 DLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLER 251 (272)
Q Consensus 214 ~eLy~~~f~~f~~~W~~~~at~mdF~~Vl~~~r~qL~r 251 (272)
++||++.|=.| |..+-.||+..++.+|+-|..
T Consensus 2 dKLYaaiFGvF------msS~DdDF~nFI~vVksVLtd 33 (69)
T PHA02975 2 EKLFTGTYGVF------LESNDSDFEDFIDTIMHVLTG 33 (69)
T ss_pred hhHHHHHHHhh------cCCChHHHHHHHHHHHHHHcC
Confidence 57888888877 556778999999998876643
No 11
>PHA02844 putative transmembrane protein; Provisional
Probab=20.35 E-value=1.4e+02 Score=22.41 Aligned_cols=33 Identities=24% Similarity=0.486 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHh
Q 024106 214 DLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERE 252 (272)
Q Consensus 214 ~eLy~~~f~~f~~~W~~~~at~mdF~~Vl~~~r~qL~r~ 252 (272)
++||++.|=.| |..+-.||+..++.+|+-|...
T Consensus 2 DKLYaaiFGVF------msS~DdDFnnFI~vVksVLtd~ 34 (75)
T PHA02844 2 DKLYTAIFGVF------LSSENEDFNNFIDVVKSVLSDD 34 (75)
T ss_pred hhHHHHHHhhh------cCCchHHHHHHHHHHHHHHcCC
Confidence 57888888887 5667789999999998877543
Done!