Query 024107
Match_columns 272
No_of_seqs 149 out of 2104
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 18:19:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uem_A Protein disulfide-isome 100.0 7.3E-41 2.5E-45 289.6 29.1 245 2-251 105-358 (361)
2 3f8u_A Protein disulfide-isome 100.0 4.8E-35 1.6E-39 262.3 27.5 261 2-272 206-481 (481)
3 2b5e_A Protein disulfide-isome 100.0 1.7E-35 5.7E-40 266.6 23.9 248 2-254 209-471 (504)
4 3idv_A Protein disulfide-isome 100.0 4.2E-35 1.4E-39 239.4 22.1 219 13-252 14-239 (241)
5 3apo_A DNAJ homolog subfamily 100.0 1.5E-32 5.3E-37 259.2 24.3 222 2-251 428-657 (780)
6 3apo_A DNAJ homolog subfamily 100.0 1.6E-32 5.4E-37 259.2 22.2 224 2-251 531-768 (780)
7 1a8l_A Protein disulfide oxido 100.0 4.4E-31 1.5E-35 213.7 14.6 195 31-249 22-225 (226)
8 2ywm_A Glutaredoxin-like prote 100.0 1E-29 3.6E-34 206.1 15.3 198 24-251 11-221 (229)
9 2hls_A Protein disulfide oxido 99.9 1.1E-25 3.8E-30 183.7 19.7 202 23-254 16-230 (243)
10 3us3_A Calsequestrin-1; calciu 99.9 2.2E-25 7.7E-30 192.7 17.3 209 10-251 9-228 (367)
11 2r2j_A Thioredoxin domain-cont 99.9 3.4E-24 1.2E-28 186.4 20.8 206 14-251 5-219 (382)
12 1sji_A Calsequestrin 2, calseq 99.9 1.2E-24 4.1E-29 187.1 17.4 205 13-251 10-226 (350)
13 3ed3_A Protein disulfide-isome 99.9 1.2E-23 3.9E-28 176.7 20.6 214 12-253 15-270 (298)
14 3f8u_A Protein disulfide-isome 99.9 5.7E-22 2E-26 177.4 19.6 205 15-251 2-218 (481)
15 2djk_A PDI, protein disulfide- 99.9 1.2E-22 3.9E-27 150.6 11.2 125 10-139 2-130 (133)
16 2b5e_A Protein disulfide-isome 99.9 6.1E-21 2.1E-25 171.7 20.6 199 13-251 13-221 (504)
17 3uem_A Protein disulfide-isome 99.9 1.3E-20 4.5E-25 162.5 18.9 215 4-252 7-232 (361)
18 3h79_A Thioredoxin-like protei 99.9 8.4E-21 2.9E-25 139.4 12.9 109 140-248 13-126 (127)
19 3q6o_A Sulfhydryl oxidase 1; p 99.8 8.8E-20 3E-24 149.0 19.2 219 12-250 10-240 (244)
20 2djj_A PDI, protein disulfide- 99.8 1.2E-19 4E-24 131.9 13.0 112 139-251 4-118 (121)
21 3t58_A Sulfhydryl oxidase 1; o 99.8 7.4E-19 2.5E-23 157.4 20.0 219 13-250 11-240 (519)
22 3zzx_A Thioredoxin; oxidoreduc 99.8 6.3E-20 2.1E-24 130.0 10.4 98 145-248 3-104 (105)
23 2dj3_A Protein disulfide-isome 99.8 3.1E-19 1E-23 131.9 12.9 114 140-253 5-121 (133)
24 3gnj_A Thioredoxin domain prot 99.8 1.7E-19 5.8E-24 128.9 10.2 105 142-250 4-110 (111)
25 4f9z_D Endoplasmic reticulum r 99.8 1.8E-18 6.1E-23 139.7 16.7 204 15-250 11-225 (227)
26 2trx_A Thioredoxin; electron t 99.8 6.4E-19 2.2E-23 125.3 12.3 104 143-250 3-108 (108)
27 1sji_A Calsequestrin 2, calseq 99.8 9.6E-18 3.3E-22 144.0 21.0 221 2-251 111-347 (350)
28 2qsi_A Putative hydrogenase ex 99.8 1.3E-19 4.5E-24 132.6 7.9 104 143-250 16-123 (137)
29 3dxb_A Thioredoxin N-terminall 99.8 4.4E-19 1.5E-23 142.7 11.2 113 138-254 8-122 (222)
30 2o8v_B Thioredoxin 1; disulfid 99.8 1.7E-18 5.7E-23 127.3 13.0 104 143-250 23-128 (128)
31 2av4_A Thioredoxin-like protei 99.8 1.2E-18 4E-23 129.6 11.6 105 144-250 23-139 (160)
32 1w4v_A Thioredoxin, mitochondr 99.8 8.1E-19 2.8E-23 127.2 10.2 110 137-250 8-119 (119)
33 2voc_A Thioredoxin; electron t 99.8 1.4E-18 4.8E-23 124.5 11.3 105 144-254 3-109 (112)
34 2i4a_A Thioredoxin; acidophIle 99.8 2.4E-18 8.2E-23 121.9 11.5 102 143-248 3-106 (107)
35 1t00_A Thioredoxin, TRX; redox 99.8 2.3E-18 7.8E-23 123.2 11.2 104 143-250 6-111 (112)
36 3ga4_A Dolichyl-diphosphooligo 99.8 4E-18 1.4E-22 130.8 13.0 111 142-254 18-157 (178)
37 2dml_A Protein disulfide-isome 99.8 1.4E-18 4.9E-23 127.8 10.1 109 140-251 15-125 (130)
38 2dj1_A Protein disulfide-isome 99.8 2.1E-18 7.2E-23 128.5 11.0 117 136-256 11-130 (140)
39 1x5d_A Protein disulfide-isome 99.8 1.7E-18 5.7E-23 127.8 10.1 109 140-252 5-119 (133)
40 2qgv_A Hydrogenase-1 operon pr 99.8 1.4E-19 4.7E-24 133.0 4.0 106 144-254 19-129 (140)
41 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.4E-18 4.8E-23 129.7 9.4 107 141-251 5-113 (140)
42 3die_A Thioredoxin, TRX; elect 99.8 2.5E-18 8.5E-23 121.6 10.2 101 143-249 4-106 (106)
43 1thx_A Thioredoxin, thioredoxi 99.8 3.7E-18 1.3E-22 122.5 11.3 106 142-251 7-114 (115)
44 2ppt_A Thioredoxin-2; thiredox 99.8 2.9E-18 9.9E-23 130.2 10.8 107 141-252 46-154 (155)
45 1dby_A Chloroplast thioredoxin 99.8 2.9E-18 9.9E-23 121.6 10.1 102 144-249 3-106 (107)
46 3aps_A DNAJ homolog subfamily 99.8 2.4E-18 8.2E-23 125.1 9.7 107 142-252 3-115 (122)
47 3tco_A Thioredoxin (TRXA-1); d 99.8 5.1E-18 1.8E-22 120.6 11.1 103 142-249 4-108 (109)
48 1fb6_A Thioredoxin M; electron 99.8 4.9E-18 1.7E-22 119.9 10.8 102 144-249 2-105 (105)
49 2i1u_A Thioredoxin, TRX, MPT46 99.8 2.4E-18 8.2E-23 124.8 9.3 107 140-250 10-118 (121)
50 3uvt_A Thioredoxin domain-cont 99.8 4.6E-18 1.6E-22 121.3 10.4 103 142-248 5-110 (111)
51 3p2a_A Thioredoxin 2, putative 99.8 5.3E-18 1.8E-22 127.7 11.1 107 141-252 37-145 (148)
52 3bj5_A Protein disulfide-isome 99.8 1.4E-17 4.7E-22 124.9 13.2 130 8-139 8-142 (147)
53 3hxs_A Thioredoxin, TRXP; elec 99.8 4.7E-18 1.6E-22 126.8 10.5 107 140-250 20-139 (141)
54 3us3_A Calsequestrin-1; calciu 99.8 5.8E-17 2E-21 139.9 18.8 225 2-254 113-352 (367)
55 2l5l_A Thioredoxin; structural 99.8 1.4E-17 4.9E-22 123.5 13.0 111 140-255 7-131 (136)
56 3h79_A Thioredoxin-like protei 99.8 1.1E-17 3.6E-22 122.7 11.8 106 12-122 13-126 (127)
57 3evi_A Phosducin-like protein 99.8 9E-18 3.1E-22 121.1 11.1 100 143-248 4-112 (118)
58 1mek_A Protein disulfide isome 99.7 4.3E-18 1.5E-22 123.0 9.2 111 141-252 6-119 (120)
59 1nsw_A Thioredoxin, TRX; therm 99.7 6.4E-18 2.2E-22 119.4 9.9 101 144-249 2-104 (105)
60 2yzu_A Thioredoxin; redox prot 99.7 8.5E-18 2.9E-22 119.3 10.0 104 143-251 2-107 (109)
61 1oaz_A Thioredoxin 1; immune s 99.7 2.6E-18 9E-23 125.3 7.4 104 143-250 4-123 (123)
62 3qfa_C Thioredoxin; protein-pr 99.7 4.7E-18 1.6E-22 122.6 8.6 102 142-249 12-116 (116)
63 4euy_A Uncharacterized protein 99.7 4.6E-18 1.6E-22 120.3 8.3 96 148-249 7-104 (105)
64 3ed3_A Protein disulfide-isome 99.7 1.6E-17 5.4E-22 139.3 11.9 112 140-253 15-145 (298)
65 2pu9_C TRX-F, thioredoxin F-ty 99.7 2.7E-17 9.1E-22 117.5 11.1 103 141-249 4-110 (111)
66 1gh2_A Thioredoxin-like protei 99.7 2E-17 6.9E-22 117.3 10.3 101 144-250 3-107 (107)
67 2e0q_A Thioredoxin; electron t 99.7 2.5E-17 8.6E-22 115.8 10.1 101 144-250 1-103 (104)
68 1xwb_A Thioredoxin; dimerizati 99.7 3.7E-17 1.3E-21 115.5 10.7 101 144-249 2-106 (106)
69 3ga4_A Dolichyl-diphosphooligo 99.7 7E-17 2.4E-21 123.9 12.3 118 4-126 8-155 (178)
70 1r26_A Thioredoxin; redox-acti 99.7 5.4E-17 1.9E-21 118.6 11.1 101 143-250 20-123 (125)
71 1v98_A Thioredoxin; oxidoreduc 99.7 3.1E-17 1.1E-21 122.2 9.8 105 142-251 33-139 (140)
72 1x5e_A Thioredoxin domain cont 99.7 4.8E-17 1.7E-21 118.9 10.2 105 141-252 6-112 (126)
73 2vlu_A Thioredoxin, thioredoxi 99.7 6E-17 2E-21 117.6 10.6 104 142-251 13-121 (122)
74 3apq_A DNAJ homolog subfamily 99.7 4E-17 1.4E-21 130.2 10.4 108 141-253 96-205 (210)
75 3qou_A Protein YBBN; thioredox 99.7 4.3E-17 1.5E-21 136.0 10.8 106 141-250 6-114 (287)
76 2dbc_A PDCL2, unnamed protein 99.7 3.9E-16 1.3E-20 115.6 14.7 105 141-251 9-122 (135)
77 1ep7_A Thioredoxin CH1, H-type 99.7 4.8E-17 1.6E-21 116.2 9.3 103 143-250 3-111 (112)
78 3f3q_A Thioredoxin-1; His TAG, 99.7 6.9E-17 2.4E-21 115.1 10.1 100 143-249 8-109 (109)
79 3gix_A Thioredoxin-like protei 99.7 4.3E-17 1.5E-21 122.8 9.1 99 148-250 10-121 (149)
80 3d6i_A Monothiol glutaredoxin- 99.7 6.1E-17 2.1E-21 115.8 8.9 103 144-250 2-109 (112)
81 2vim_A Thioredoxin, TRX; thior 99.7 1.5E-16 5.1E-21 112.0 10.3 99 145-249 2-104 (104)
82 1syr_A Thioredoxin; SGPP, stru 99.7 8.9E-17 3E-21 115.0 9.0 103 140-249 7-111 (112)
83 3tco_A Thioredoxin (TRXA-1); d 99.7 1.5E-16 5.3E-21 112.8 10.2 105 13-123 3-108 (109)
84 1faa_A Thioredoxin F; electron 99.7 2E-16 6.7E-21 115.3 10.9 103 141-249 17-123 (124)
85 2dj1_A Protein disulfide-isome 99.7 3E-16 1E-20 116.7 12.0 108 13-127 16-127 (140)
86 2dml_A Protein disulfide-isome 99.7 3E-16 1E-20 115.2 11.9 108 12-124 15-124 (130)
87 3m9j_A Thioredoxin; oxidoreduc 99.7 1.8E-16 6.1E-21 111.8 10.2 99 145-249 3-105 (105)
88 2xc2_A Thioredoxinn; oxidoredu 99.7 1.4E-16 4.8E-21 114.9 9.7 100 143-249 14-117 (117)
89 1xfl_A Thioredoxin H1; AT3G510 99.7 2.6E-16 8.7E-21 114.8 10.9 104 140-249 14-123 (124)
90 2trc_P Phosducin, MEKA, PP33; 99.7 2.5E-17 8.6E-22 131.6 6.0 128 115-249 73-212 (217)
91 1qgv_A Spliceosomal protein U5 99.7 3.9E-16 1.3E-20 116.6 11.9 102 148-251 10-122 (142)
92 3ul3_B Thioredoxin, thioredoxi 99.7 4.7E-17 1.6E-21 119.4 6.6 94 150-247 32-127 (128)
93 2trx_A Thioredoxin; electron t 99.7 6.4E-16 2.2E-20 109.6 11.8 104 14-123 2-107 (108)
94 1a0r_P Phosducin, MEKA, PP33; 99.7 7.8E-17 2.7E-21 130.5 7.8 128 117-250 88-226 (245)
95 3gnj_A Thioredoxin domain prot 99.7 3.2E-16 1.1E-20 111.6 10.2 104 15-124 5-110 (111)
96 3hz4_A Thioredoxin; NYSGXRC, P 99.7 1.3E-16 4.5E-21 118.9 8.3 108 12-125 4-113 (140)
97 3q6o_A Sulfhydryl oxidase 1; p 99.7 4E-16 1.4E-20 127.2 12.0 113 140-253 10-130 (244)
98 2wz9_A Glutaredoxin-3; protein 99.7 4.8E-16 1.7E-20 117.6 11.4 107 141-253 11-121 (153)
99 3die_A Thioredoxin, TRX; elect 99.7 4.9E-16 1.7E-20 109.7 10.7 102 14-122 3-105 (106)
100 1x5d_A Protein disulfide-isome 99.7 5.2E-16 1.8E-20 114.3 10.9 107 13-125 6-118 (133)
101 2oe3_A Thioredoxin-3; electron 99.7 1.5E-16 5.1E-21 114.3 7.7 100 142-247 12-113 (114)
102 2c0g_A ERP29 homolog, windbeut 99.7 3.8E-16 1.3E-20 126.6 10.6 106 141-252 15-134 (248)
103 3zzx_A Thioredoxin; oxidoreduc 99.7 3.7E-16 1.3E-20 110.4 9.3 95 20-122 7-104 (105)
104 2l57_A Uncharacterized protein 99.7 2.7E-16 9.1E-21 114.9 8.7 94 157-254 23-121 (126)
105 2h8l_A Protein disulfide-isome 99.7 5.1E-16 1.7E-20 127.2 11.3 136 2-145 102-251 (252)
106 2c0g_A ERP29 homolog, windbeut 99.7 1.1E-15 3.8E-20 123.9 13.0 144 13-190 15-174 (248)
107 2dj0_A Thioredoxin-related tra 99.7 1.4E-17 4.9E-22 123.6 1.7 104 142-248 7-119 (137)
108 2j23_A Thioredoxin; immune pro 99.7 1.9E-16 6.6E-21 114.9 7.7 104 141-249 14-120 (121)
109 1nsw_A Thioredoxin, TRX; therm 99.7 4.1E-16 1.4E-20 110.0 9.2 102 16-123 2-104 (105)
110 2voc_A Thioredoxin; electron t 99.7 5.4E-16 1.9E-20 110.9 9.8 102 16-124 3-105 (112)
111 2f51_A Thioredoxin; electron t 99.7 3.4E-16 1.1E-20 113.2 8.6 104 143-252 4-115 (118)
112 4f9z_D Endoplasmic reticulum r 99.7 1.3E-15 4.5E-20 122.8 12.9 122 2-126 101-227 (227)
113 2l6c_A Thioredoxin; oxidoreduc 99.6 1.8E-16 6.2E-21 113.1 6.8 101 144-251 5-107 (110)
114 2es7_A Q8ZP25_salty, putative 99.6 8.4E-17 2.9E-21 120.0 5.1 106 143-254 18-129 (142)
115 3ec3_A Protein disulfide-isome 99.6 2E-15 6.8E-20 123.5 13.7 136 2-144 104-248 (250)
116 1ti3_A Thioredoxin H, PTTRXH1; 99.6 5.9E-16 2E-20 110.6 9.1 103 142-250 4-112 (113)
117 2yzu_A Thioredoxin; redox prot 99.6 6.8E-16 2.3E-20 109.4 9.3 104 15-124 2-106 (109)
118 3p2a_A Thioredoxin 2, putative 99.6 1.8E-15 6E-20 113.7 12.0 106 14-125 38-144 (148)
119 2i4a_A Thioredoxin; acidophIle 99.6 1.5E-15 5.3E-20 107.3 11.1 103 14-122 2-106 (107)
120 1w4v_A Thioredoxin, mitochondr 99.6 1.2E-15 4.1E-20 110.3 10.7 107 11-123 10-118 (119)
121 2vm1_A Thioredoxin, thioredoxi 99.6 7.8E-16 2.7E-20 110.9 9.5 103 143-251 7-115 (118)
122 1thx_A Thioredoxin, thioredoxi 99.6 2.2E-15 7.6E-20 107.9 11.9 105 14-124 7-113 (115)
123 2yj7_A LPBCA thioredoxin; oxid 99.5 1.3E-17 4.3E-22 117.8 0.0 102 144-249 3-106 (106)
124 2e0q_A Thioredoxin; electron t 99.6 1E-15 3.6E-20 107.4 10.0 102 16-124 1-103 (104)
125 2ppt_A Thioredoxin-2; thiredox 99.6 9.9E-16 3.4E-20 116.1 10.5 105 15-125 48-153 (155)
126 3hxs_A Thioredoxin, TRXP; elec 99.6 1.3E-15 4.3E-20 113.5 10.7 107 12-124 20-139 (141)
127 3d22_A TRXH4, thioredoxin H-ty 99.6 1.2E-15 3.9E-20 113.5 10.2 106 141-252 23-134 (139)
128 3qfa_C Thioredoxin; protein-pr 99.6 6.6E-16 2.3E-20 111.2 8.6 104 12-123 10-116 (116)
129 3emx_A Thioredoxin; structural 99.6 1.1E-16 3.6E-21 118.6 4.5 104 141-253 15-129 (135)
130 2o8v_B Thioredoxin 1; disulfid 99.6 1.7E-15 5.8E-20 111.1 10.6 103 15-123 23-127 (128)
131 1x5e_A Thioredoxin domain cont 99.6 1.7E-15 5.7E-20 110.6 10.5 107 12-127 5-113 (126)
132 2dj3_A Protein disulfide-isome 99.6 1.6E-15 5.4E-20 111.8 10.3 110 11-125 4-119 (133)
133 3aps_A DNAJ homolog subfamily 99.6 7.8E-16 2.7E-20 111.7 8.3 105 14-124 3-113 (122)
134 2djj_A PDI, protein disulfide- 99.6 3.1E-15 1.1E-19 108.2 11.4 105 12-124 5-117 (121)
135 1dby_A Chloroplast thioredoxin 99.6 2.8E-15 9.5E-20 106.0 10.8 102 16-123 3-106 (107)
136 1t00_A Thioredoxin, TRX; redox 99.6 3.7E-15 1.3E-19 106.3 11.5 105 14-124 5-111 (112)
137 2l5l_A Thioredoxin; structural 99.6 2.9E-15 1E-19 110.9 11.1 106 13-125 8-127 (136)
138 4euy_A Uncharacterized protein 99.6 1.6E-15 5.5E-20 107.1 9.3 97 20-123 7-104 (105)
139 2qc7_A ERP31, ERP28, endoplasm 99.6 2.6E-15 9.1E-20 121.2 11.7 102 143-249 6-118 (240)
140 3uvt_A Thioredoxin domain-cont 99.6 3.5E-15 1.2E-19 106.1 10.4 103 13-122 4-110 (111)
141 1mek_A Protein disulfide isome 99.6 1.2E-15 4.1E-20 110.0 7.9 107 13-124 6-117 (120)
142 2qsi_A Putative hydrogenase ex 99.6 2.6E-15 8.9E-20 109.8 9.7 103 16-124 17-123 (137)
143 1fb6_A Thioredoxin M; electron 99.6 4.9E-15 1.7E-19 104.3 10.9 101 16-122 2-104 (105)
144 1zma_A Bacterocin transport ac 99.6 1.6E-16 5.6E-21 114.7 3.1 99 143-246 13-117 (118)
145 3cxg_A Putative thioredoxin; m 99.6 1.2E-15 4E-20 112.7 7.6 107 140-251 18-130 (133)
146 1v98_A Thioredoxin; oxidoreduc 99.6 5.3E-15 1.8E-19 110.0 11.2 106 14-125 33-139 (140)
147 2wz9_A Glutaredoxin-3; protein 99.6 3.7E-15 1.3E-19 112.7 10.2 129 11-157 9-141 (153)
148 2av4_A Thioredoxin-like protei 99.6 2.6E-15 8.8E-20 111.6 8.6 106 16-126 23-141 (160)
149 3idv_A Protein disulfide-isome 99.6 4.7E-15 1.6E-19 120.3 10.9 116 2-124 111-237 (241)
150 3t58_A Sulfhydryl oxidase 1; o 99.6 8.1E-15 2.8E-19 131.3 12.6 114 140-253 10-130 (519)
151 3apq_A DNAJ homolog subfamily 99.6 6.7E-15 2.3E-19 117.2 10.8 108 13-126 96-204 (210)
152 1oaz_A Thioredoxin 1; immune s 99.6 1.4E-15 4.6E-20 110.8 6.0 104 14-123 3-122 (123)
153 2r2j_A Thioredoxin domain-cont 99.6 4E-15 1.4E-19 129.1 10.0 157 2-165 207-376 (382)
154 2qgv_A Hydrogenase-1 operon pr 99.6 1.4E-15 4.7E-20 111.7 6.0 104 15-124 18-125 (140)
155 1ep7_A Thioredoxin CH1, H-type 99.6 8.2E-15 2.8E-19 104.5 9.9 103 15-124 3-111 (112)
156 2l57_A Uncharacterized protein 99.6 1.6E-14 5.5E-19 105.3 11.7 107 14-125 4-118 (126)
157 3f3q_A Thioredoxin-1; His TAG, 99.6 1.1E-14 3.7E-19 103.6 10.4 101 14-122 7-108 (109)
158 1xwb_A Thioredoxin; dimerizati 99.6 1E-14 3.5E-19 102.8 10.2 100 16-122 2-105 (106)
159 2i1u_A Thioredoxin, TRX, MPT46 99.6 6.1E-15 2.1E-19 106.7 9.2 107 12-124 10-118 (121)
160 3dxb_A Thioredoxin N-terminall 99.6 1.2E-14 4.3E-19 116.6 11.9 109 12-126 10-120 (222)
161 1r26_A Thioredoxin; redox-acti 99.6 7.7E-15 2.6E-19 107.1 9.5 101 16-124 21-123 (125)
162 2pu9_C TRX-F, thioredoxin F-ty 99.6 2E-14 7E-19 102.3 11.5 103 13-123 4-110 (111)
163 3ul3_B Thioredoxin, thioredoxi 99.6 8.8E-15 3E-19 107.2 9.7 104 12-121 23-127 (128)
164 3qou_A Protein YBBN; thioredox 99.6 8E-15 2.7E-19 122.2 10.4 108 12-125 5-115 (287)
165 1syr_A Thioredoxin; SGPP, stru 99.6 7.3E-15 2.5E-19 105.0 8.7 105 11-123 6-111 (112)
166 2vlu_A Thioredoxin, thioredoxi 99.6 1.2E-14 4.2E-19 105.3 9.7 105 12-124 11-120 (122)
167 1gh2_A Thioredoxin-like protei 99.6 2.6E-14 8.9E-19 101.1 10.9 99 17-123 4-106 (107)
168 3qcp_A QSOX from trypanosoma b 99.6 9.3E-16 3.2E-20 134.4 3.5 107 140-247 21-136 (470)
169 2kuc_A Putative disulphide-iso 99.6 6.4E-15 2.2E-19 108.0 7.3 105 145-253 9-124 (130)
170 2djk_A PDI, protein disulfide- 99.6 3.7E-14 1.3E-18 104.6 11.4 102 143-251 7-116 (133)
171 3d6i_A Monothiol glutaredoxin- 99.6 3.3E-14 1.1E-18 101.4 10.6 102 16-124 2-109 (112)
172 2h8l_A Protein disulfide-isome 99.5 3.2E-13 1.1E-17 110.5 17.7 209 11-252 3-232 (252)
173 3m9j_A Thioredoxin; oxidoreduc 99.5 2E-14 6.9E-19 101.1 8.7 96 20-123 7-105 (105)
174 2qc7_A ERP31, ERP28, endoplasm 99.5 3.3E-14 1.1E-18 114.8 10.9 102 13-123 4-118 (240)
175 1faa_A Thioredoxin F; electron 99.5 6.1E-14 2.1E-18 101.9 11.2 104 12-123 16-123 (124)
176 2vim_A Thioredoxin, TRX; thior 99.5 4.2E-14 1.4E-18 99.3 9.9 98 17-122 2-103 (104)
177 2xc2_A Thioredoxinn; oxidoredu 99.5 3.7E-14 1.3E-18 102.0 9.8 99 15-122 14-116 (117)
178 1fo5_A Thioredoxin; disulfide 99.5 3.5E-14 1.2E-18 95.9 8.9 81 161-249 3-85 (85)
179 1wmj_A Thioredoxin H-type; str 99.5 1.4E-15 4.9E-20 111.5 1.6 107 141-253 13-125 (130)
180 3gix_A Thioredoxin-like protei 99.5 3.4E-14 1.2E-18 106.9 9.0 103 18-125 8-122 (149)
181 2j23_A Thioredoxin; immune pro 99.5 3.2E-14 1.1E-18 103.1 8.4 102 15-123 16-120 (121)
182 2l6c_A Thioredoxin; oxidoreduc 99.5 2.9E-14 1E-18 101.5 7.9 102 15-124 4-106 (110)
183 3fk8_A Disulphide isomerase; A 99.5 2.1E-14 7.2E-19 105.7 7.1 88 158-249 27-132 (133)
184 3dml_A Putative uncharacterize 99.5 3.7E-14 1.3E-18 100.9 8.0 87 159-250 17-110 (116)
185 1nho_A Probable thioredoxin; b 99.5 3.4E-14 1.2E-18 96.0 7.4 80 162-249 3-84 (85)
186 2es7_A Q8ZP25_salty, putative 99.5 2.5E-14 8.5E-19 106.6 6.7 104 15-125 18-126 (142)
187 1wou_A Thioredoxin -related pr 99.5 4.3E-14 1.5E-18 102.8 7.1 99 144-247 7-122 (123)
188 1xfl_A Thioredoxin H1; AT3G510 99.5 1.3E-13 4.5E-18 100.3 9.7 102 14-123 16-123 (124)
189 2fwh_A Thiol:disulfide interch 99.5 3.2E-14 1.1E-18 105.0 6.3 104 144-250 13-128 (134)
190 1qgv_A Spliceosomal protein U5 99.5 1.1E-13 3.7E-18 103.2 8.9 101 20-125 10-122 (142)
191 3emx_A Thioredoxin; structural 99.5 6.2E-14 2.1E-18 103.6 7.4 103 13-125 15-127 (135)
192 2dj0_A Thioredoxin-related tra 99.5 9.2E-15 3.2E-19 108.3 2.9 104 12-121 5-118 (137)
193 3f9u_A Putative exported cytoc 99.5 1E-13 3.4E-18 106.8 8.6 100 147-250 31-166 (172)
194 2oe3_A Thioredoxin-3; electron 99.5 6.3E-14 2.2E-18 100.4 6.8 100 14-121 12-113 (114)
195 1ti3_A Thioredoxin H, PTTRXH1; 99.5 1.5E-13 5E-18 98.0 8.6 102 15-124 5-112 (113)
196 1zma_A Bacterocin transport ac 99.5 5.3E-14 1.8E-18 101.4 6.1 106 12-120 10-117 (118)
197 1a8l_A Protein disulfide oxido 99.5 1.6E-13 5.4E-18 110.3 9.6 115 3-123 103-225 (226)
198 3d22_A TRXH4, thioredoxin H-ty 99.5 1.6E-13 5.4E-18 101.8 8.7 103 15-125 26-133 (139)
199 2vm1_A Thioredoxin, thioredoxi 99.5 3.3E-13 1.1E-17 96.9 9.4 103 14-124 6-114 (118)
200 3iv4_A Putative oxidoreductase 99.5 1E-13 3.4E-18 97.4 6.3 97 143-245 7-111 (112)
201 3ec3_A Protein disulfide-isome 99.4 5.7E-12 1.9E-16 102.9 17.3 206 12-252 4-230 (250)
202 2yj7_A LPBCA thioredoxin; oxid 99.2 8.4E-15 2.9E-19 103.0 0.0 101 16-122 3-105 (106)
203 2f51_A Thioredoxin; electron t 99.4 3.3E-13 1.1E-17 97.3 8.4 104 14-124 3-113 (118)
204 3cxg_A Putative thioredoxin; m 99.4 2.1E-13 7E-18 100.5 7.0 105 12-124 18-129 (133)
205 2kuc_A Putative disulphide-iso 99.4 4.8E-13 1.7E-17 97.9 8.1 107 16-125 8-122 (130)
206 2lst_A Thioredoxin; structural 99.1 1.7E-14 5.8E-19 105.8 0.0 91 158-252 17-118 (130)
207 3qcp_A QSOX from trypanosoma b 99.4 1.5E-13 5.2E-18 120.4 5.8 107 13-124 22-152 (470)
208 2ywm_A Glutaredoxin-like prote 99.4 8.7E-13 3E-17 106.2 9.5 113 2-124 104-220 (229)
209 2dbc_A PDCL2, unnamed protein 99.4 1.9E-12 6.6E-17 95.5 10.0 101 12-122 8-119 (135)
210 1wou_A Thioredoxin -related pr 99.4 4.9E-13 1.7E-17 97.1 6.7 102 13-121 4-122 (123)
211 3evi_A Phosducin-like protein 99.4 2.1E-12 7.1E-17 92.9 8.8 99 14-121 3-111 (118)
212 2ju5_A Thioredoxin disulfide i 99.4 1.5E-12 5.1E-17 98.4 8.5 88 159-251 46-153 (154)
213 1hyu_A AHPF, alkyl hydroperoxi 99.4 8.1E-12 2.8E-16 112.5 14.5 177 32-248 19-198 (521)
214 1fo5_A Thioredoxin; disulfide 99.4 2.5E-12 8.6E-17 86.6 8.5 81 32-122 3-84 (85)
215 3fk8_A Disulphide isomerase; A 99.4 1.7E-12 5.8E-17 95.4 8.2 90 29-123 27-132 (133)
216 3ph9_A Anterior gradient prote 99.4 3.5E-12 1.2E-16 95.6 9.4 90 157-250 41-145 (151)
217 2fwh_A Thiol:disulfide interch 99.4 2.1E-12 7.1E-17 95.2 8.1 107 14-123 11-127 (134)
218 1sen_A Thioredoxin-like protei 99.3 5.1E-13 1.7E-17 102.1 4.7 90 158-251 44-149 (164)
219 2b5x_A YKUV protein, TRXY; thi 99.3 9.9E-12 3.4E-16 92.5 11.6 103 145-251 15-146 (148)
220 1zzo_A RV1677; thioredoxin fol 99.3 8.3E-12 2.8E-16 91.5 10.6 101 144-250 10-135 (136)
221 1nho_A Probable thioredoxin; b 99.3 3.5E-12 1.2E-16 85.9 7.9 81 33-123 3-84 (85)
222 1lu4_A Soluble secreted antige 99.3 5.7E-12 1.9E-16 92.5 9.6 100 144-249 9-135 (136)
223 1wmj_A Thioredoxin H-type; str 99.3 4.5E-13 1.5E-17 98.0 2.9 104 14-125 14-123 (130)
224 3or5_A Thiol:disulfide interch 99.3 2.2E-11 7.5E-16 92.5 11.2 108 143-253 18-154 (165)
225 3kp8_A Vkorc1/thioredoxin doma 99.3 1E-12 3.5E-17 92.7 3.1 73 160-247 12-92 (106)
226 2trc_P Phosducin, MEKA, PP33; 99.3 2.1E-12 7.1E-17 103.0 4.9 102 13-122 98-211 (217)
227 3raz_A Thioredoxin-related pro 99.3 3.1E-11 1.1E-15 90.5 10.4 93 159-253 23-143 (151)
228 2f9s_A Thiol-disulfide oxidore 99.3 3.1E-11 1.1E-15 90.4 9.9 94 159-254 25-142 (151)
229 1z6n_A Hypothetical protein PA 99.2 9.1E-12 3.1E-16 95.1 6.7 94 148-247 42-140 (167)
230 3iv4_A Putative oxidoreductase 99.2 7.8E-12 2.7E-16 87.7 5.7 93 20-119 13-111 (112)
231 1ilo_A Conserved hypothetical 99.2 7.3E-12 2.5E-16 82.8 4.8 73 163-245 2-76 (77)
232 3lor_A Thiol-disulfide isomera 99.2 7.1E-11 2.4E-15 89.2 10.8 92 159-252 29-157 (160)
233 3erw_A Sporulation thiol-disul 99.2 4E-11 1.4E-15 88.9 9.1 85 159-245 33-144 (145)
234 1un2_A DSBA, thiol-disulfide i 99.2 3.3E-12 1.1E-16 100.3 2.8 115 77-205 40-159 (197)
235 2l5o_A Putative thioredoxin; s 99.2 8.2E-11 2.8E-15 88.2 10.1 94 159-254 27-145 (153)
236 3ia1_A THIO-disulfide isomeras 99.2 7E-11 2.4E-15 88.7 9.7 88 161-253 31-147 (154)
237 2lst_A Thioredoxin; structural 98.8 1.3E-12 4.3E-17 95.7 0.0 102 21-125 9-117 (130)
238 2h30_A Thioredoxin, peptide me 99.2 5.9E-11 2E-15 90.1 9.2 104 143-250 22-156 (164)
239 1a0r_P Phosducin, MEKA, PP33; 99.2 2.2E-11 7.4E-16 98.5 6.8 103 13-122 111-224 (245)
240 2lja_A Putative thiol-disulfid 99.2 4.7E-11 1.6E-15 89.4 8.2 94 159-254 29-147 (152)
241 2ju5_A Thioredoxin disulfide i 99.2 6.6E-11 2.3E-15 89.2 9.0 93 29-124 45-152 (154)
242 2hls_A Protein disulfide oxido 99.2 9E-11 3.1E-15 95.3 10.3 97 19-125 125-227 (243)
243 2b5x_A YKUV protein, TRXY; thi 99.2 1.9E-10 6.6E-15 85.4 11.2 105 19-125 17-146 (148)
244 1lu4_A Soluble secreted antige 99.2 2.1E-10 7.3E-15 84.0 11.2 87 30-123 23-135 (136)
245 3eyt_A Uncharacterized protein 99.2 1.7E-10 5.8E-15 87.0 10.6 92 159-252 27-154 (158)
246 3f9u_A Putative exported cytoc 99.2 4.7E-11 1.6E-15 91.6 7.3 102 18-124 30-166 (172)
247 1jfu_A Thiol:disulfide interch 99.2 3.5E-10 1.2E-14 87.7 12.2 139 111-252 12-182 (186)
248 3kp8_A Vkorc1/thioredoxin doma 99.2 2.6E-11 8.9E-16 85.5 5.1 74 31-121 12-92 (106)
249 1zzo_A RV1677; thioredoxin fol 99.1 4.4E-10 1.5E-14 82.1 11.2 101 20-124 14-135 (136)
250 2fgx_A Putative thioredoxin; N 99.1 4.8E-11 1.6E-15 83.7 5.1 75 162-245 30-106 (107)
251 3ewl_A Uncharacterized conserv 99.1 2.9E-10 1E-14 84.1 9.8 87 159-250 26-141 (142)
252 3hcz_A Possible thiol-disulfid 99.1 4.8E-11 1.6E-15 88.8 5.4 90 159-250 30-146 (148)
253 4evm_A Thioredoxin family prot 99.1 2.6E-10 8.8E-15 83.4 9.1 87 159-248 21-137 (138)
254 3fkf_A Thiol-disulfide oxidore 99.1 2E-10 6.7E-15 85.4 8.5 87 159-250 32-146 (148)
255 3or5_A Thiol:disulfide interch 99.1 9.9E-10 3.4E-14 83.2 12.5 91 30-125 33-152 (165)
256 3eur_A Uncharacterized protein 99.1 5.2E-10 1.8E-14 82.8 10.2 83 160-247 31-142 (142)
257 2b1k_A Thiol:disulfide interch 99.1 1.6E-10 5.5E-15 88.2 7.4 102 143-250 32-160 (168)
258 3gl3_A Putative thiol:disulfid 99.1 5.8E-10 2E-14 83.4 10.2 94 159-254 27-146 (152)
259 3raz_A Thioredoxin-related pro 99.1 1.1E-09 3.8E-14 81.9 11.7 95 30-126 23-142 (151)
260 3hdc_A Thioredoxin family prot 99.1 5.5E-10 1.9E-14 84.3 9.9 91 159-251 40-153 (158)
261 3lwa_A Secreted thiol-disulfid 99.1 3.5E-10 1.2E-14 87.6 9.0 90 159-250 58-181 (183)
262 2lrn_A Thiol:disulfide interch 99.1 5.6E-10 1.9E-14 83.7 9.7 89 159-252 28-143 (152)
263 2f9s_A Thiol-disulfide oxidore 99.1 1.2E-09 4E-14 81.7 11.2 94 30-126 25-140 (151)
264 1ilo_A Conserved hypothetical 99.1 8.9E-10 3E-14 72.5 9.2 72 35-119 3-76 (77)
265 3ira_A Conserved protein; meth 99.1 1.1E-10 3.7E-15 89.4 5.2 76 147-225 27-116 (173)
266 3erw_A Sporulation thiol-disul 99.1 8.6E-10 2.9E-14 81.6 10.0 87 30-119 33-144 (145)
267 2lja_A Putative thiol-disulfid 99.1 1.8E-09 6.2E-14 80.7 11.9 94 30-125 29-144 (152)
268 1sen_A Thioredoxin-like protei 99.1 5E-11 1.7E-15 90.9 3.2 97 23-124 38-148 (164)
269 3kcm_A Thioredoxin family prot 99.1 7.3E-10 2.5E-14 83.0 9.7 92 159-252 27-145 (154)
270 1kng_A Thiol:disulfide interch 99.1 3.7E-10 1.3E-14 84.8 7.6 87 159-250 41-152 (156)
271 1ttz_A Conserved hypothetical 99.1 7.8E-11 2.7E-15 79.7 3.3 74 164-251 3-78 (87)
272 3ha9_A Uncharacterized thiored 99.0 1.1E-09 3.7E-14 83.2 9.5 86 159-250 36-164 (165)
273 2l5o_A Putative thioredoxin; s 99.0 2.5E-09 8.7E-14 79.9 11.2 93 30-127 27-144 (153)
274 3hcz_A Possible thiol-disulfid 99.0 2.6E-09 9.1E-14 79.2 10.0 88 30-122 30-144 (148)
275 2h30_A Thioredoxin, peptide me 99.0 5E-10 1.7E-14 84.9 6.0 105 15-124 22-156 (164)
276 3fkf_A Thiol-disulfide oxidore 99.0 5.4E-09 1.9E-13 77.5 11.3 89 30-124 32-146 (148)
277 3gl3_A Putative thiol:disulfid 99.0 5E-09 1.7E-13 78.2 11.1 94 30-125 27-143 (152)
278 4evm_A Thioredoxin family prot 99.0 4E-09 1.4E-13 76.9 10.1 91 30-122 21-137 (138)
279 2ywi_A Hypothetical conserved 99.0 1.2E-09 3.9E-14 85.5 7.6 91 160-252 45-176 (196)
280 3lor_A Thiol-disulfide isomera 99.0 4.5E-09 1.5E-13 79.2 10.7 91 30-125 29-156 (160)
281 3dml_A Putative uncharacterize 99.0 9.7E-10 3.3E-14 78.0 6.3 88 30-124 17-110 (116)
282 2lrt_A Uncharacterized protein 99.0 1.9E-09 6.6E-14 80.9 8.3 85 160-246 35-144 (152)
283 3ira_A Conserved protein; meth 99.0 9.3E-10 3.2E-14 84.1 6.4 113 5-122 11-142 (173)
284 2lrn_A Thiol:disulfide interch 99.0 7.5E-09 2.6E-13 77.4 11.3 91 30-125 28-142 (152)
285 2hyx_A Protein DIPZ; thioredox 99.0 2.3E-09 8E-14 91.3 9.4 90 159-250 81-199 (352)
286 3ha9_A Uncharacterized thiored 98.9 7.8E-09 2.7E-13 78.4 11.1 91 30-125 36-165 (165)
287 3ia1_A THIO-disulfide isomeras 98.9 4.1E-09 1.4E-13 78.9 9.3 87 32-125 31-145 (154)
288 3s9f_A Tryparedoxin; thioredox 98.9 3.3E-09 1.1E-13 80.8 8.5 66 159-224 47-138 (165)
289 1o8x_A Tryparedoxin, TRYX, TXN 98.9 2.6E-09 8.9E-14 79.4 7.8 64 159-222 27-116 (146)
290 1i5g_A Tryparedoxin II; electr 98.9 2.7E-09 9.1E-14 79.1 7.7 78 144-222 13-116 (144)
291 3kh7_A Thiol:disulfide interch 98.9 3.1E-09 1.1E-13 81.8 7.8 86 159-250 57-167 (176)
292 2cvb_A Probable thiol-disulfid 98.9 4.3E-09 1.5E-13 81.7 8.5 89 159-252 32-161 (188)
293 3eyt_A Uncharacterized protein 98.9 1.1E-08 3.6E-13 77.0 10.4 94 30-125 27-153 (158)
294 1o73_A Tryparedoxin; electron 98.9 3.2E-09 1.1E-13 78.6 7.0 64 159-222 27-116 (144)
295 3lwa_A Secreted thiol-disulfid 98.9 1.6E-08 5.5E-13 78.1 11.1 90 30-124 58-181 (183)
296 3fw2_A Thiol-disulfide oxidore 98.9 1.3E-08 4.4E-13 76.0 10.1 87 159-250 32-148 (150)
297 1kng_A Thiol:disulfide interch 98.9 8.3E-09 2.8E-13 77.3 8.6 91 30-124 41-152 (156)
298 3kp9_A Vkorc1/thioredoxin doma 98.9 6.7E-10 2.3E-14 91.7 2.7 70 162-246 199-276 (291)
299 3u5r_E Uncharacterized protein 98.9 1.1E-08 3.6E-13 81.6 9.2 90 160-253 58-190 (218)
300 2dlx_A UBX domain-containing p 98.8 5.1E-09 1.7E-13 78.5 6.8 98 150-252 29-138 (153)
301 2b1k_A Thiol:disulfide interch 98.8 9.2E-09 3.1E-13 78.3 8.2 88 29-124 49-160 (168)
302 1z6n_A Hypothetical protein PA 98.8 4.3E-09 1.5E-13 80.2 5.4 95 19-121 41-140 (167)
303 3hdc_A Thioredoxin family prot 98.8 4.1E-08 1.4E-12 73.9 10.8 87 30-121 40-149 (158)
304 3fw2_A Thiol-disulfide oxidore 98.8 6.7E-08 2.3E-12 72.0 11.9 90 30-124 32-148 (150)
305 4fo5_A Thioredoxin-like protei 98.8 1.2E-08 4.3E-13 75.4 7.4 83 159-246 31-141 (143)
306 2ywi_A Hypothetical conserved 98.8 3.5E-08 1.2E-12 76.9 10.2 92 33-126 48-176 (196)
307 3kcm_A Thioredoxin family prot 98.8 5.3E-08 1.8E-12 72.7 10.4 94 30-125 27-144 (154)
308 2lrt_A Uncharacterized protein 98.8 5.2E-08 1.8E-12 72.9 10.3 82 30-116 34-140 (152)
309 2p5q_A Glutathione peroxidase 98.8 4.3E-08 1.5E-12 74.5 9.7 90 159-250 31-168 (170)
310 3ph9_A Anterior gradient prote 98.8 1.3E-08 4.5E-13 76.1 6.5 90 27-122 40-140 (151)
311 2ggt_A SCO1 protein homolog, m 98.8 4.1E-08 1.4E-12 74.1 9.5 92 159-251 22-162 (164)
312 3cmi_A Peroxiredoxin HYR1; thi 98.8 2.5E-08 8.5E-13 76.2 8.3 89 159-250 31-168 (171)
313 3dwv_A Glutathione peroxidase- 98.8 4.4E-08 1.5E-12 76.0 9.8 91 159-251 45-184 (187)
314 2dlx_A UBX domain-containing p 98.8 4.6E-08 1.6E-12 73.2 9.3 93 29-125 40-137 (153)
315 1nm3_A Protein HI0572; hybrid, 98.8 7.9E-08 2.7E-12 77.7 11.5 173 30-219 32-224 (241)
316 2ls5_A Uncharacterized protein 98.2 9.2E-10 3.2E-14 83.1 0.0 88 159-249 32-147 (159)
317 2cvb_A Probable thiol-disulfid 98.8 5.9E-08 2E-12 75.2 10.3 95 30-126 32-161 (188)
318 2vup_A Glutathione peroxidase- 98.8 7.7E-08 2.6E-12 74.8 11.0 90 159-250 47-185 (190)
319 2rli_A SCO2 protein homolog, m 98.7 4E-08 1.4E-12 74.8 9.1 91 160-251 26-165 (171)
320 2k6v_A Putative cytochrome C o 98.7 1.9E-08 6.4E-13 76.7 7.2 88 159-248 34-171 (172)
321 2fgx_A Putative thioredoxin; N 98.7 3E-08 1E-12 69.4 7.3 76 33-119 30-106 (107)
322 3ewl_A Uncharacterized conserv 98.7 4.2E-08 1.4E-12 72.3 8.1 86 30-123 26-140 (142)
323 1wjk_A C330018D20RIK protein; 98.7 1.3E-08 4.4E-13 70.7 4.9 78 160-250 15-96 (100)
324 3kh7_A Thiol:disulfide interch 98.7 8.7E-08 3E-12 73.6 9.9 90 30-124 57-167 (176)
325 2v1m_A Glutathione peroxidase; 98.7 2.6E-08 9E-13 75.6 6.9 90 159-250 30-167 (169)
326 1jfu_A Thiol:disulfide interch 98.7 1.6E-07 5.3E-12 72.6 11.0 94 30-125 59-181 (186)
327 3drn_A Peroxiredoxin, bacterio 98.7 1.1E-07 3.8E-12 71.8 9.7 87 160-248 28-147 (161)
328 2lus_A Thioredoxion; CR-Trp16, 98.1 2.2E-09 7.6E-14 79.2 0.0 67 160-226 25-121 (143)
329 2hyx_A Protein DIPZ; thioredox 98.7 9.1E-08 3.1E-12 81.5 9.9 93 30-124 81-199 (352)
330 1i5g_A Tryparedoxin II; electr 98.7 1.6E-07 5.4E-12 69.4 10.0 73 30-104 27-124 (144)
331 3kp9_A Vkorc1/thioredoxin doma 98.7 1.7E-08 5.7E-13 83.4 4.8 74 33-121 199-277 (291)
332 1ttz_A Conserved hypothetical 98.7 3.8E-08 1.3E-12 66.3 5.6 74 35-124 3-77 (87)
333 2obi_A PHGPX, GPX-4, phospholi 98.6 1.4E-07 4.7E-12 72.8 9.2 88 159-248 46-182 (183)
334 2f8a_A Glutathione peroxidase 98.6 1.9E-07 6.6E-12 73.7 10.2 44 159-203 46-89 (208)
335 1o8x_A Tryparedoxin, TRYX, TXN 98.6 2.4E-07 8.4E-12 68.5 10.0 66 30-97 27-116 (146)
336 3eur_A Uncharacterized protein 98.6 1.3E-07 4.4E-12 69.7 8.4 86 30-120 30-141 (142)
337 2p31_A CL683, glutathione pero 98.6 1.2E-07 4E-12 73.2 8.5 89 159-249 48-180 (181)
338 2e7p_A Glutaredoxin; thioredox 98.6 6.1E-09 2.1E-13 74.2 0.8 78 160-248 19-106 (116)
339 1o73_A Tryparedoxin; electron 98.6 2E-07 7E-12 68.7 9.2 66 30-97 27-116 (144)
340 3u5r_E Uncharacterized protein 98.6 3.5E-07 1.2E-11 72.7 10.7 95 31-127 58-190 (218)
341 2k8s_A Thioredoxin; dimer, str 98.6 6.5E-09 2.2E-13 69.0 0.4 59 163-225 3-64 (80)
342 1ego_A Glutaredoxin; electron 98.6 2.3E-08 7.9E-13 67.0 2.9 74 163-249 2-83 (85)
343 2bmx_A Alkyl hydroperoxidase C 98.6 1.1E-07 3.6E-12 74.3 7.2 89 160-250 45-170 (195)
344 1xvw_A Hypothetical protein RV 98.6 1.5E-07 5.3E-12 70.7 7.7 86 160-247 35-157 (160)
345 1we0_A Alkyl hydroperoxide red 98.6 9.3E-08 3.2E-12 74.1 6.4 89 160-250 31-157 (187)
346 1zof_A Alkyl hydroperoxide-red 98.5 8.2E-08 2.8E-12 75.1 5.4 89 159-249 32-160 (198)
347 3s9f_A Tryparedoxin; thioredox 98.5 5.3E-07 1.8E-11 68.4 9.5 68 30-99 47-138 (165)
348 2rli_A SCO2 protein homolog, m 98.5 8.2E-07 2.8E-11 67.4 10.6 93 30-124 25-164 (171)
349 2ggt_A SCO1 protein homolog, m 98.5 5.4E-07 1.9E-11 67.9 9.5 93 30-124 22-161 (164)
350 3kij_A Probable glutathione pe 98.5 6E-07 2.1E-11 69.0 9.7 105 143-250 22-170 (180)
351 3cmi_A Peroxiredoxin HYR1; thi 98.5 8.6E-07 2.9E-11 67.5 9.5 92 30-124 31-168 (171)
352 2gs3_A PHGPX, GPX-4, phospholi 98.5 8.5E-07 2.9E-11 68.5 9.5 88 159-248 48-184 (185)
353 1hyu_A AHPF, alkyl hydroperoxi 98.5 7.5E-07 2.6E-11 80.1 10.2 110 2-122 85-198 (521)
354 4fo5_A Thioredoxin-like protei 98.4 9.2E-07 3.2E-11 65.1 8.8 86 30-120 31-141 (143)
355 2vup_A Glutathione peroxidase- 98.4 1.4E-06 4.7E-11 67.6 10.0 93 30-124 47-185 (190)
356 1qmv_A Human thioredoxin perox 98.4 7.8E-07 2.7E-11 69.5 8.3 89 159-249 33-162 (197)
357 2p5q_A Glutathione peroxidase 98.4 1.3E-06 4.4E-11 66.2 9.2 93 30-124 31-168 (170)
358 1xzo_A BSSCO, hypothetical pro 98.4 2.1E-06 7.1E-11 65.3 10.1 91 159-250 32-172 (174)
359 2bmx_A Alkyl hydroperoxidase C 98.4 1.4E-06 4.8E-11 67.9 9.0 94 30-125 44-171 (195)
360 2v1m_A Glutathione peroxidase; 98.4 3.5E-06 1.2E-10 63.7 10.4 94 30-125 30-168 (169)
361 3drn_A Peroxiredoxin, bacterio 98.4 2.5E-06 8.7E-11 64.2 9.5 91 30-122 27-147 (161)
362 2k6v_A Putative cytochrome C o 98.3 1E-06 3.5E-11 66.9 7.0 90 30-122 34-171 (172)
363 1uul_A Tryparedoxin peroxidase 98.3 9.7E-07 3.3E-11 69.2 7.0 88 160-249 36-164 (202)
364 2ls5_A Uncharacterized protein 97.6 7.5E-08 2.6E-12 72.4 0.0 89 30-124 32-148 (159)
365 3dwv_A Glutathione peroxidase- 98.3 2.7E-06 9.1E-11 65.8 8.6 94 30-125 45-184 (187)
366 3gyk_A 27KDA outer membrane pr 98.3 1E-06 3.6E-11 67.3 6.2 82 159-250 21-173 (175)
367 1h75_A Glutaredoxin-like prote 98.3 3.7E-07 1.3E-11 60.4 3.2 69 164-248 3-76 (81)
368 1we0_A Alkyl hydroperoxide red 98.3 1.8E-06 6.2E-11 66.7 7.6 93 30-124 30-157 (187)
369 2h01_A 2-Cys peroxiredoxin; th 98.3 1.3E-06 4.3E-11 67.9 6.5 89 159-249 30-158 (192)
370 1eej_A Thiol:disulfide interch 98.3 6.8E-06 2.3E-10 65.1 10.8 80 159-249 85-210 (216)
371 2i81_A 2-Cys peroxiredoxin; st 98.3 1.9E-06 6.4E-11 68.2 7.5 89 159-249 51-179 (213)
372 1zye_A Thioredoxin-dependent p 98.3 1.8E-06 6.3E-11 68.7 7.4 88 160-249 56-184 (220)
373 1zof_A Alkyl hydroperoxide-red 98.3 1.3E-06 4.6E-11 68.1 6.2 92 30-123 32-160 (198)
374 1wjk_A C330018D20RIK protein; 98.3 9.1E-07 3.1E-11 61.2 4.6 77 32-123 16-95 (100)
375 2lus_A Thioredoxion; CR-Trp16, 97.6 1.2E-07 4.1E-12 69.7 0.0 68 30-99 24-118 (143)
376 2jsy_A Probable thiol peroxida 98.2 5.2E-06 1.8E-10 62.8 9.1 87 159-249 43-166 (167)
377 2p31_A CL683, glutathione pero 98.2 2.7E-06 9.3E-11 65.4 7.5 92 30-123 48-180 (181)
378 2k8s_A Thioredoxin; dimer, str 98.2 9E-07 3.1E-11 58.4 3.9 57 34-95 3-61 (80)
379 1xvw_A Hypothetical protein RV 98.2 5E-06 1.7E-10 62.3 8.4 88 31-121 35-157 (160)
380 2l4c_A Endoplasmic reticulum r 98.2 5.6E-06 1.9E-10 59.5 7.9 94 144-248 23-122 (124)
381 1r7h_A NRDH-redoxin; thioredox 98.2 4.6E-06 1.6E-10 54.0 6.5 66 164-245 3-73 (75)
382 3ztl_A Thioredoxin peroxidase; 98.2 6.1E-06 2.1E-10 65.7 8.4 87 159-247 68-195 (222)
383 1t3b_A Thiol:disulfide interch 98.2 2.1E-06 7.1E-11 67.9 5.5 78 159-247 85-208 (211)
384 3kij_A Probable glutathione pe 98.2 1.2E-05 3.9E-10 61.7 9.6 93 30-124 37-170 (180)
385 2f8a_A Glutathione peroxidase 98.2 1.2E-05 4E-10 63.4 9.6 42 30-71 46-89 (208)
386 2l4c_A Endoplasmic reticulum r 98.1 9.2E-06 3.1E-10 58.4 7.9 91 19-122 26-122 (124)
387 2b7k_A SCO1 protein; metalloch 98.1 6.3E-06 2.1E-10 64.5 7.6 92 159-251 40-180 (200)
388 3gkn_A Bacterioferritin comigr 98.1 1.5E-05 5.1E-10 59.9 8.8 87 160-248 35-160 (163)
389 2obi_A PHGPX, GPX-4, phospholi 98.1 1.2E-05 3.9E-10 61.9 8.3 90 30-121 46-181 (183)
390 1qmv_A Human thioredoxin perox 98.1 1.3E-05 4.5E-10 62.4 8.7 92 30-123 33-162 (197)
391 2gs3_A PHGPX, GPX-4, phospholi 98.1 1.6E-05 5.6E-10 61.2 8.7 42 30-71 48-91 (185)
392 1v58_A Thiol:disulfide interch 98.1 5.6E-06 1.9E-10 66.8 6.2 85 160-250 97-233 (241)
393 1xvq_A Thiol peroxidase; thior 98.1 1.9E-05 6.5E-10 60.2 8.8 87 159-250 43-168 (175)
394 1uul_A Tryparedoxin peroxidase 98.0 1.5E-05 5.3E-10 62.3 8.3 92 30-123 35-164 (202)
395 2i3y_A Epididymal secretory gl 98.0 7.7E-05 2.6E-09 58.9 11.8 43 159-203 55-97 (215)
396 1zye_A Thioredoxin-dependent p 98.0 2E-05 6.9E-10 62.6 8.4 92 31-124 56-185 (220)
397 1ego_A Glutaredoxin; electron 98.0 6.9E-06 2.4E-10 54.5 4.9 77 35-123 3-83 (85)
398 2i81_A 2-Cys peroxiredoxin; st 98.0 3.1E-05 1.1E-09 61.1 8.7 92 30-123 51-179 (213)
399 3h93_A Thiol:disulfide interch 98.0 2.3E-05 8E-10 60.6 7.9 42 159-202 24-65 (192)
400 3gyk_A 27KDA outer membrane pr 98.0 4.3E-05 1.5E-09 58.1 9.2 84 31-123 22-172 (175)
401 2h01_A 2-Cys peroxiredoxin; th 97.9 2.8E-05 9.5E-10 60.2 7.7 92 30-123 30-158 (192)
402 2a4v_A Peroxiredoxin DOT5; yea 97.9 3.3E-05 1.1E-09 57.8 7.5 42 161-204 36-78 (159)
403 2b7k_A SCO1 protein; metalloch 97.9 7.6E-05 2.6E-09 58.2 9.8 94 30-125 40-180 (200)
404 2jsy_A Probable thiol peroxida 97.9 9.4E-05 3.2E-09 55.7 9.9 91 30-123 43-166 (167)
405 2e7p_A Glutaredoxin; thioredox 97.9 3.6E-06 1.2E-10 59.6 1.6 88 24-122 13-106 (116)
406 1xzo_A BSSCO, hypothetical pro 97.9 5.1E-05 1.7E-09 57.5 8.1 93 30-124 32-172 (174)
407 2r37_A Glutathione peroxidase 97.8 0.00019 6.4E-09 56.4 10.9 43 159-203 37-79 (207)
408 1eej_A Thiol:disulfide interch 97.8 3.8E-05 1.3E-09 60.8 6.8 84 30-123 85-210 (216)
409 3bj5_A Protein disulfide-isome 97.8 0.00012 4E-09 54.3 8.9 108 142-253 14-130 (147)
410 2lqo_A Putative glutaredoxin R 97.8 3.9E-05 1.3E-09 51.9 5.5 75 163-252 5-86 (92)
411 2c0d_A Thioredoxin peroxidase 97.8 7.1E-05 2.4E-09 59.4 7.9 89 159-249 55-183 (221)
412 3ztl_A Thioredoxin peroxidase; 97.8 0.00011 3.7E-09 58.3 9.0 91 30-122 68-196 (222)
413 3me7_A Putative uncharacterize 97.8 0.00021 7.2E-09 54.1 10.2 93 160-253 28-165 (170)
414 3a2v_A Probable peroxiredoxin; 97.7 5.5E-05 1.9E-09 61.1 6.4 89 159-249 32-161 (249)
415 1t3b_A Thiol:disulfide interch 97.7 0.00013 4.5E-09 57.4 8.0 79 30-121 85-208 (211)
416 2ec4_A FAS-associated factor 1 97.7 0.00072 2.5E-08 51.6 11.8 90 159-250 54-168 (178)
417 3gkn_A Bacterioferritin comigr 97.7 0.00018 6.3E-09 53.8 8.3 91 30-122 34-160 (163)
418 1kte_A Thioltransferase; redox 97.7 2.2E-05 7.4E-10 54.4 2.8 56 163-225 13-77 (105)
419 2yzh_A Probable thiol peroxida 97.7 0.00026 8.9E-09 53.5 9.1 85 160-248 47-170 (171)
420 1n8j_A AHPC, alkyl hydroperoxi 97.6 0.00017 5.8E-09 55.5 8.0 88 160-249 30-155 (186)
421 4hde_A SCO1/SENC family lipopr 97.6 0.00056 1.9E-08 51.7 10.6 90 159-249 31-169 (170)
422 3ixr_A Bacterioferritin comigr 97.6 0.00016 5.6E-09 55.2 7.5 87 160-248 51-176 (179)
423 2klx_A Glutaredoxin; thioredox 97.6 3.9E-05 1.3E-09 51.4 3.5 53 163-225 7-64 (89)
424 2hze_A Glutaredoxin-1; thiored 97.6 1.9E-05 6.4E-10 55.8 1.9 58 161-225 18-84 (114)
425 3qpm_A Peroxiredoxin; oxidored 97.5 0.0005 1.7E-08 55.2 9.6 88 159-248 76-204 (240)
426 3qmx_A Glutaredoxin A, glutare 97.5 7.5E-05 2.6E-09 51.3 4.0 56 160-225 14-76 (99)
427 3hd5_A Thiol:disulfide interch 97.5 0.00018 6.2E-09 55.7 6.6 43 159-203 24-66 (195)
428 3nzn_A Glutaredoxin; structura 97.5 0.00024 8.4E-09 49.0 6.5 71 160-245 20-101 (103)
429 3ic4_A Glutaredoxin (GRX-1); s 97.5 7.2E-05 2.5E-09 50.4 3.6 67 164-246 14-91 (92)
430 1fov_A Glutaredoxin 3, GRX3; a 97.5 0.00012 3.9E-09 48.1 4.5 66 164-247 3-74 (82)
431 1v58_A Thiol:disulfide interch 97.5 0.00029 1E-08 56.6 7.6 87 32-123 98-232 (241)
432 3c1r_A Glutaredoxin-1; oxidize 97.5 5.5E-05 1.9E-09 53.8 2.7 55 164-225 27-91 (118)
433 3gv1_A Disulfide interchange p 97.5 0.00069 2.4E-08 50.0 8.7 80 158-250 12-139 (147)
434 2cq9_A GLRX2 protein, glutared 97.4 8.9E-05 3E-09 53.7 3.5 84 150-248 18-113 (130)
435 1r7h_A NRDH-redoxin; thioredox 97.4 0.00063 2.2E-08 43.5 7.2 67 35-119 3-73 (75)
436 3h93_A Thiol:disulfide interch 97.3 0.00062 2.1E-08 52.5 7.7 41 30-70 24-65 (192)
437 2ht9_A Glutaredoxin-2; thiored 97.3 0.0001 3.4E-09 54.5 2.9 63 150-225 40-111 (146)
438 1xvq_A Thiol peroxidase; thior 97.3 0.00074 2.5E-08 51.2 7.9 90 30-122 43-163 (175)
439 3hz8_A Thiol:disulfide interch 97.3 0.00037 1.3E-08 54.0 6.1 44 159-204 23-66 (193)
440 2a4v_A Peroxiredoxin DOT5; yea 97.3 0.00075 2.6E-08 50.2 7.5 83 33-118 37-145 (159)
441 2i3y_A Epididymal secretory gl 97.3 0.0021 7.3E-08 50.6 10.3 41 30-71 55-97 (215)
442 2pn8_A Peroxiredoxin-4; thiore 97.3 0.00036 1.2E-08 54.9 5.8 88 160-249 48-176 (211)
443 2c0d_A Thioredoxin peroxidase 97.3 0.0011 3.8E-08 52.5 8.6 92 30-123 55-183 (221)
444 3hd5_A Thiol:disulfide interch 97.3 0.0015 5.2E-08 50.4 9.3 42 30-71 24-66 (195)
445 3tjj_A Peroxiredoxin-4; thiore 97.2 0.0011 3.8E-08 53.6 8.4 86 160-247 91-217 (254)
446 3msz_A Glutaredoxin 1; alpha-b 97.2 0.00036 1.2E-08 46.4 4.7 73 162-250 4-87 (89)
447 3ixr_A Bacterioferritin comigr 97.2 0.0016 5.6E-08 49.5 8.7 91 30-122 50-176 (179)
448 2yan_A Glutaredoxin-3; oxidore 97.2 0.00019 6.4E-09 49.8 3.0 62 151-225 9-81 (105)
449 2r37_A Glutathione peroxidase 97.2 0.0024 8.3E-08 49.9 9.7 41 30-71 37-79 (207)
450 3rhb_A ATGRXC5, glutaredoxin-C 97.2 0.00039 1.3E-08 48.8 4.2 52 164-225 21-82 (113)
451 2wfc_A Peroxiredoxin 5, PRDX5; 97.2 0.00058 2E-08 51.5 5.5 45 159-204 30-77 (167)
452 1q98_A Thiol peroxidase, TPX; 97.1 0.00051 1.7E-08 51.6 5.0 42 160-204 43-85 (165)
453 2pn8_A Peroxiredoxin-4; thiore 97.1 0.0018 6.3E-08 50.8 8.4 92 30-123 47-176 (211)
454 1n8j_A AHPC, alkyl hydroperoxi 97.1 0.0015 5.3E-08 50.0 7.7 93 30-124 29-156 (186)
455 2khp_A Glutaredoxin; thioredox 97.1 0.00032 1.1E-08 47.1 3.3 53 163-225 7-65 (92)
456 1tp9_A Peroxiredoxin, PRX D (t 97.1 0.00058 2E-08 51.2 5.1 45 159-204 34-81 (162)
457 1psq_A Probable thiol peroxida 97.1 0.00067 2.3E-08 50.8 5.1 85 159-247 41-162 (163)
458 3a2v_A Probable peroxiredoxin; 97.1 0.001 3.4E-08 53.7 6.3 93 30-124 32-162 (249)
459 4dvc_A Thiol:disulfide interch 97.0 0.0042 1.4E-07 47.1 9.4 40 160-201 21-60 (184)
460 3me7_A Putative uncharacterize 97.0 0.0044 1.5E-07 46.7 9.4 93 30-124 27-162 (170)
461 2ec4_A FAS-associated factor 1 97.0 0.0056 1.9E-07 46.6 10.0 94 29-124 53-168 (178)
462 1kte_A Thioltransferase; redox 97.0 0.00047 1.6E-08 47.5 3.5 63 24-92 5-72 (105)
463 3qpm_A Peroxiredoxin; oxidored 97.0 0.0034 1.1E-07 50.3 9.0 92 30-123 76-205 (240)
464 4gqc_A Thiol peroxidase, perox 97.0 0.00011 3.6E-09 55.5 -0.0 91 158-250 31-160 (164)
465 1un2_A DSBA, thiol-disulfide i 97.0 0.00054 1.9E-08 53.2 3.7 52 22-73 102-159 (197)
466 4g2e_A Peroxiredoxin; redox pr 97.0 0.00071 2.4E-08 50.4 4.2 90 30-121 29-155 (157)
467 1nm3_A Protein HI0572; hybrid, 96.9 0.0012 4.3E-08 52.7 5.6 45 159-204 32-79 (241)
468 3uma_A Hypothetical peroxiredo 96.9 0.0014 4.8E-08 50.3 5.5 44 160-204 56-102 (184)
469 3l9v_A Putative thiol-disulfid 96.9 0.0006 2E-08 52.6 3.3 43 160-204 14-59 (189)
470 2pwj_A Mitochondrial peroxired 96.9 0.00055 1.9E-08 51.9 3.0 43 161-204 45-89 (171)
471 1q98_A Thiol peroxidase, TPX; 96.9 0.00093 3.2E-08 50.1 4.2 61 30-92 42-104 (165)
472 2yzh_A Probable thiol peroxida 96.8 0.0013 4.5E-08 49.5 4.9 61 30-92 46-108 (171)
473 1psq_A Probable thiol peroxida 96.8 0.0013 4.3E-08 49.2 4.7 61 30-92 41-103 (163)
474 1wik_A Thioredoxin-like protei 96.8 0.0011 3.8E-08 46.1 3.9 63 150-225 6-79 (109)
475 3zrd_A Thiol peroxidase; oxido 96.8 0.0014 4.8E-08 51.0 4.8 43 159-204 77-120 (200)
476 3tjj_A Peroxiredoxin-4; thiore 96.8 0.0045 1.5E-07 50.1 7.9 91 30-122 90-218 (254)
477 3p7x_A Probable thiol peroxida 96.7 0.0046 1.6E-07 46.3 7.3 54 30-85 45-100 (166)
478 1h75_A Glutaredoxin-like prote 96.7 0.0028 9.7E-08 41.1 5.3 72 35-121 3-75 (81)
479 4g2e_A Peroxiredoxin; redox pr 96.7 0.00032 1.1E-08 52.4 0.4 45 159-204 29-74 (157)
480 4gqc_A Thiol peroxidase, perox 96.6 0.00043 1.5E-08 52.1 0.9 96 26-123 28-159 (164)
481 3h8q_A Thioredoxin reductase 3 96.6 0.002 6.9E-08 45.2 3.9 52 164-225 19-79 (114)
482 2wfc_A Peroxiredoxin 5, PRDX5; 96.6 0.0029 9.9E-08 47.6 5.0 62 30-92 30-97 (167)
483 2hze_A Glutaredoxin-1; thiored 96.5 0.0014 4.6E-08 46.0 2.9 63 24-92 12-79 (114)
484 3zrd_A Thiol peroxidase; oxido 96.5 0.002 6.9E-08 50.1 4.0 61 30-92 77-139 (200)
485 3mng_A Peroxiredoxin-5, mitoch 96.5 0.0031 1.1E-07 47.8 4.9 45 159-204 42-89 (173)
486 4dvc_A Thiol:disulfide interch 96.5 0.035 1.2E-06 41.8 10.7 40 31-70 21-61 (184)
487 3p7x_A Probable thiol peroxida 96.4 0.0031 1.1E-07 47.2 4.5 83 160-247 46-165 (166)
488 2znm_A Thiol:disulfide interch 96.4 0.0079 2.7E-07 46.2 6.6 40 31-70 22-62 (195)
489 2lqo_A Putative glutaredoxin R 96.4 0.022 7.7E-07 38.1 8.0 77 34-124 5-84 (92)
490 3uma_A Hypothetical peroxiredo 96.3 0.0047 1.6E-07 47.3 5.1 62 30-92 55-122 (184)
491 1tp9_A Peroxiredoxin, PRX D (t 96.3 0.0035 1.2E-07 46.8 4.3 62 30-92 34-101 (162)
492 2v2g_A Peroxiredoxin 6; oxidor 96.3 0.0052 1.8E-07 49.0 5.3 88 160-249 29-164 (233)
493 2klx_A Glutaredoxin; thioredox 96.3 0.0048 1.7E-07 40.9 4.3 49 34-92 7-59 (89)
494 2yan_A Glutaredoxin-3; oxidore 96.3 0.0046 1.6E-07 42.6 4.3 60 24-92 10-76 (105)
495 3ctg_A Glutaredoxin-2; reduced 96.3 0.0012 4E-08 47.6 1.2 55 164-225 39-103 (129)
496 1z6m_A Conserved hypothetical 96.2 0.013 4.6E-07 44.0 7.1 42 160-203 27-70 (175)
497 1prx_A HORF6; peroxiredoxin, h 96.2 0.0089 3.1E-07 47.3 6.3 86 162-249 34-168 (224)
498 1z6m_A Conserved hypothetical 96.1 0.043 1.5E-06 41.1 9.6 39 32-70 28-69 (175)
499 2cq9_A GLRX2 protein, glutared 96.1 0.0097 3.3E-07 42.7 5.5 60 24-92 20-84 (130)
500 2znm_A Thiol:disulfide interch 96.1 0.0048 1.6E-07 47.4 4.2 43 159-203 21-63 (195)
No 1
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=7.3e-41 Score=289.61 Aligned_cols=245 Identities=31% Similarity=0.627 Sum_probs=220.9
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccCC-cceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC--Ccccch
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSSP-IKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA--DEDLAK 77 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~~-~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~--~~~~~~ 77 (272)
++|.+||..++.|.+.+++++++.+++.++ ++++|+||++| ++|+++.+.|+++|+.+++++.|+.+||+ .+ +
T Consensus 105 ~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~---~ 181 (361)
T 3uem_A 105 ENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDN---Q 181 (361)
T ss_dssp HHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGG---H
T ss_pred HHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHH---H
Confidence 579999999999999999999999988665 45688999999 99999999999999999999999999999 56 8
Q ss_pred hHHhhcCCCC--CCceEEEEEeC-CcceeecCC-CCCChHHHHHHHHHHhcCccccccccCCCCCC-CCCCeEEecccch
Q 024107 78 PFLTLFGLEE--SKNTVVTAFDN-KAISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDN-TNANVQIVVGKTF 152 (272)
Q Consensus 78 ~l~~~~~i~~--~~P~i~~~~~~-~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~ 152 (272)
++|+.|||++ + |++ .+++. +...+|.+. |.++.++|.+|+.++++|++++.++++++|.. ....+..+++++|
T Consensus 182 ~~~~~fgi~~~~~-P~~-~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f 259 (361)
T 3uem_A 182 RILEFFGLKKEEC-PAV-RLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNF 259 (361)
T ss_dssp HHHHHTTCCTTTC-SEE-EEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTH
T ss_pred HHHHHcCCCccCC-ccE-EEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCch
Confidence 9999999997 8 999 78876 444677654 68999999999999999999999999999987 6778999999999
Q ss_pred hHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCcccCCCeEEEEeCCCCcCceEe
Q 024107 153 DDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKV 232 (272)
Q Consensus 153 ~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~~~~~v~~~P~l~~~~~~~~~~~~~~ 232 (272)
++.+...+++++|+||+|||++|+.+.|.|.+++..+++..++.++.+|++.+...+++|.++||+++|++|+...+.+|
T Consensus 260 ~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~ 339 (361)
T 3uem_A 260 EDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDY 339 (361)
T ss_dssp HHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEEEEECSSSSCCCEEC
T ss_pred hhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCeEEEEECCCCcceeEe
Confidence 99998889999999999999999999999999999998755699999999999878999999999999987744446789
Q ss_pred eCCCCHHHHHHHHHHHcCc
Q 024107 233 SARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 233 ~g~~~~~~l~~~i~~~~~~ 251 (272)
.|..+.+.|.+||+++.+.
T Consensus 340 ~G~~~~~~l~~~l~~~~~~ 358 (361)
T 3uem_A 340 NGERTLDGFKKFLESGGQD 358 (361)
T ss_dssp CSCSSHHHHHHHHTTTSCS
T ss_pred cCCCCHHHHHHHHHhcCCC
Confidence 9999999999999988654
No 2
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=4.8e-35 Score=262.28 Aligned_cols=261 Identities=28% Similarity=0.505 Sum_probs=218.0
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccCCcceEEEEEEcc-c----chHHHHHHHHHHHHHhcCc---eEEEEEeCCCc
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSSPIKLQVYVFAKA-D----DLKSLLEPLEDIARNFKGK---IMFTAVDIADE 73 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~----~c~~~~~~~~~~a~~~~~~---i~~~~vd~~~~ 73 (272)
++|.+||..++.|.+.++|.+++.++.+.+ .++.|+... . .++.+...+.++|+++.++ +.|+.+|+...
T Consensus 206 ~~l~~fi~~~~~p~v~e~t~~n~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~ 283 (481)
T 3f8u_A 206 GKIKKFIQENIFGICPHMTEDNKDLIQGKD--LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF 283 (481)
T ss_dssp HHHHHHHHHHTTTTSCEECTTTHHHHTTSS--EEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT
T ss_pred HHHHHHHHHhCCCCccccChhHHHHhcCCC--ceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHH
Confidence 469999999999999999999998887544 556666543 2 2334688899999999988 99999999998
Q ss_pred ccchhHHhhcCCC----CCCceEEEEEeCCcceeecCCCCCChH--HHHHHHHHHhcCccccccccCCCCCCCCCCeEEe
Q 024107 74 DLAKPFLTLFGLE----ESKNTVVTAFDNKAISKFLLESDLTPS--NIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIV 147 (272)
Q Consensus 74 ~~~~~l~~~~~i~----~~~P~i~~~~~~~~~~~~~~~g~~~~~--~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l 147 (272)
...++.||++ .. |.+ ++++ .++.+|.+.+..+.+ +|.+|+.+++.|++.++++|+++|......+..+
T Consensus 284 ---~~~l~~~gl~~~~~~~-P~~-~i~~-~~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~ 357 (481)
T 3f8u_A 284 ---SHELSDFGLESTAGEI-PVV-AIRT-AKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVV 357 (481)
T ss_dssp ---HHHHGGGTCCCCTTCS-CEE-EEEC-SSSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEE
T ss_pred ---HHHHHHcCCCcccCCC-cEE-EEEc-CCCcccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEe
Confidence 8899999998 45 999 7777 445788888889999 9999999999999999999999999888899999
Q ss_pred cccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCCC-CCcccCCCeEEEEeCCCC
Q 024107 148 VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHP-KLQVEEYPTLLFYPAGDK 226 (272)
Q Consensus 148 ~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~~-~~~v~~~P~l~~~~~~~~ 226 (272)
++++|++.+.+.+++++|+||++||++|+.+.|.|.++++.+++..++.++.+|++.++++ .++|.++||+++|++|++
T Consensus 358 ~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 358 VAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp CTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSCCCTTCCCCSSSEEEEECTTCT
T ss_pred cccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchhhHhhCCCcccCEEEEEeCCCe
Confidence 9999999998779999999999999999999999999999998765799999999999775 899999999999999988
Q ss_pred cCceEeeCCCCHHHHHHHHHHHcCcCCCCCcchhccccccCCcCCC
Q 024107 227 ANPIKVSARSSSKNIAAFIKEQLKEKDQSPKDEQWKEKDQAPKDEL 272 (272)
Q Consensus 227 ~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~ 272 (272)
+.+++|.|..+.+.|.+||++++...... ....++..++++|+|
T Consensus 438 ~~~~~~~G~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~dl 481 (481)
T 3f8u_A 438 LNPKKYEGGRELSDFISYLQREATNPPVI--QEEKPKKKKKAQEDL 481 (481)
T ss_dssp TSCEECCSCCSHHHHHHHHHHHCSSCCCC--CCC------------
T ss_pred EeeeEeCCCCCHHHHHHHHHHhcCCcccc--cchhhhhhhhccccC
Confidence 65678999999999999999998765432 112223345556554
No 3
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=1.7e-35 Score=266.64 Aligned_cols=248 Identities=25% Similarity=0.433 Sum_probs=220.9
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccCCcceEEEEEEcccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHh
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSSPIKLQVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLT 81 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~ 81 (272)
++|.+||..++.|.+.++|.+++.++++.+.+++++|+......+.+.+.|+++|+++++++.|+.+|+... ..+|+
T Consensus 209 ~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~~---~~~~~ 285 (504)
T 2b5e_A 209 DVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDARKF---GRHAG 285 (504)
T ss_dssp HHHHHHHHHHSSCSSCBCCHHHHHHHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHHHH---TTHHH
T ss_pred HHHHHHHHhcccCCcccCCHhHHHHHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehhhh---HHHHH
Confidence 468999999999999999999999999999888888887663338899999999999999999999999988 78999
Q ss_pred hcCCC-CCCceEEEEEeCCcceeecCC--CC-----------CChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEe
Q 024107 82 LFGLE-ESKNTVVTAFDNKAISKFLLE--SD-----------LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIV 147 (272)
Q Consensus 82 ~~~i~-~~~P~i~~~~~~~~~~~~~~~--g~-----------~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l 147 (272)
.||+. .. |++ ++++...+.+|.+. ++ .+.+.|.+|+.+++.|++.+..+++++|......+..+
T Consensus 286 ~~gl~~~~-P~v-~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l 363 (504)
T 2b5e_A 286 NLNMKEQF-PLF-AIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQL 363 (504)
T ss_dssp HTTCCSCS-SEE-EEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEE
T ss_pred HcCCcccC-CEE-EEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceec
Confidence 99992 35 999 88887667788775 55 89999999999999999999999999998888899999
Q ss_pred cccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhc-CCCceEEEEEeCCCCCCCCCcccCCCeEEEEeCCCC
Q 024107 148 VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFK-GLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDK 226 (272)
Q Consensus 148 ~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~-~~~~v~~~~id~~~~~~~~~~v~~~P~l~~~~~~~~ 226 (272)
++++|.+.+.+.+++++|+||+|||++|+.+.|.|.++++.+. +..++.++.+|++.++...++|.++||+++|++|+.
T Consensus 364 ~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~G~~ 443 (504)
T 2b5e_A 364 VGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIEGYPTIVLYPGGKK 443 (504)
T ss_dssp CTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSSCCCSSSSEEEEECCTTS
T ss_pred ccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccccCCceecCeEEEEeCCce
Confidence 9999999998889999999999999999999999999999987 333799999999998665699999999999999877
Q ss_pred cCceEeeCCCCHHHHHHHHHHHcCcCCC
Q 024107 227 ANPIKVSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 227 ~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
..+.+|.|..+.+.|.+||++++.....
T Consensus 444 ~~~~~~~G~~~~~~l~~~i~~~~~~~~~ 471 (504)
T 2b5e_A 444 SESVVYQGSRSLDSLFDFIKENGHFDVD 471 (504)
T ss_dssp CCCCBCCSCCCHHHHHHHHHHHCTTCCC
T ss_pred ecceEecCCCCHHHHHHHHHhcCCCCCC
Confidence 4455899999999999999999775543
No 4
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=4.2e-35 Score=239.41 Aligned_cols=219 Identities=22% Similarity=0.313 Sum_probs=191.9
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc---eEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK---IMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~---i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
.+.+..++.++|+..+.++++++|.||++| ++|+++.|.|.++++.+.+. +.|+.|||+.. +++|++|||.++
T Consensus 14 ~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~~~ 90 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA---SVLASRFDVSGY 90 (241)
T ss_dssp ETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC---HHHHHHTTCCSS
T ss_pred CCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC---HHHHHhcCCCcC
Confidence 456899999999999989999999999999 99999999999999999876 99999999999 899999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCCcEEEEEE
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVY 168 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~ 168 (272)
||+ .++.+++.. .+.|.++.+.+.+|+.+.+..... .....+..++.++|++.+ ..+++++|+||
T Consensus 91 -Pt~-~~~~~g~~~--~~~g~~~~~~l~~~i~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~v~f~ 155 (241)
T 3idv_A 91 -PTI-KILKKGQAV--DYEGSRTQEEIVAKVREVSQPDWT----------PPPEVTLVLTKENFDEVV-NDADIILVEFY 155 (241)
T ss_dssp -SEE-EEEETTEEE--ECCSCSCHHHHHHHHHHHHSTTCC----------CCCCSSEECCTTTHHHHH-HHCSEEEEEEE
T ss_pred -CEE-EEEcCCCcc--cccCcccHHHHHHHHhhccCcccc----------cccccceeccHHHHHHhh-ccCCeEEEEEE
Confidence 999 788765433 468999999999999998764321 123467889999999987 45789999999
Q ss_pred CCCChhHHHhHHHHHHHHHHhcCC-CceEEEEEeCCCC-CCC-CCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHH
Q 024107 169 TPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDASAN-EHP-KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFI 245 (272)
Q Consensus 169 ~~~C~~c~~~~~~~~~~a~~~~~~-~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i 245 (272)
++||++|+.+.|.|.+++..+.+. +++.++.+|++.+ ++. +++|.++|++++|++|+. +.|.|..+.+.|.+||
T Consensus 156 a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~---~~~~g~~~~~~l~~~l 232 (241)
T 3idv_A 156 APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRP---YDYNGPREKYGIVDYM 232 (241)
T ss_dssp CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE---EECCSCCSHHHHHHHH
T ss_pred CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeE---EEecCCCCHHHHHHHH
Confidence 999999999999999999999763 2599999999999 664 899999999999998864 4699999999999999
Q ss_pred HHHcCcC
Q 024107 246 KEQLKEK 252 (272)
Q Consensus 246 ~~~~~~~ 252 (272)
.++++..
T Consensus 233 ~~~~~~~ 239 (241)
T 3idv_A 233 IEQSGAA 239 (241)
T ss_dssp HHHTTCT
T ss_pred HhhhCCC
Confidence 9998754
No 5
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1.5e-32 Score=259.23 Aligned_cols=222 Identities=18% Similarity=0.290 Sum_probs=199.5
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHH
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFL 80 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~ 80 (272)
++|.+|+..++.|.+.++++++|.++ .+++++|.||++| ++|+++.|.|.++|+.+++++.|+.|||+++ +.+|
T Consensus 428 ~~i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~---~~~~ 502 (780)
T 3apo_A 428 YDILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIH---EGLC 502 (780)
T ss_dssp HHHHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHH
T ss_pred HHHHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCC---HHHH
Confidence 57999999999999999999999988 6779999999999 9999999999999999998899999999998 8999
Q ss_pred hhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcC-
Q 024107 81 TLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNS- 159 (272)
Q Consensus 81 ~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~- 159 (272)
+.|||.++ ||+ .+++++ ..+.+.|.++.++|.+|+.+++++ .+..++.++|++++...
T Consensus 503 ~~~~v~~~-Pt~-~~~~~g--~~~~~~g~~~~~~l~~fi~~~~~~-----------------~v~~l~~~~f~~~v~~~~ 561 (780)
T 3apo_A 503 NMYNIQAY-PTT-VVFNQS--SIHEYEGHHSAEQILEFIEDLRNP-----------------SVVSLTPSTFNELVKQRK 561 (780)
T ss_dssp HHTTCCSS-SEE-EEEETT--EEEEECSCSCHHHHHHHHHHHHSC-----------------SEEECCHHHHHHHTTTCC
T ss_pred HHcCCCcC-CeE-EEEcCC--ceeeecCcccHHHHHHHHHhhccc-----------------ceeecCcccHHHHhhccC
Confidence 99999999 999 788764 346678999999999999999853 48889999999998653
Q ss_pred -CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCc--CceEeeC
Q 024107 160 -HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKA--NPIKVSA 234 (272)
Q Consensus 160 -~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~--~~~~~~g 234 (272)
+..++|.||+|||++|+.+.|.|.++|+.+++ ++.|+.+||+.+ .+ .+++|+++|++++|+.|... .++.|.|
T Consensus 562 ~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g 639 (780)
T 3apo_A 562 HDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNG 639 (780)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCC
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCC
Confidence 46789999999999999999999999999998 799999999998 55 47899999999999887652 3567999
Q ss_pred -CCCHHHHHHHHHHHcCc
Q 024107 235 -RSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 235 -~~~~~~l~~~i~~~~~~ 251 (272)
..+.++|.+||.+.+..
T Consensus 640 ~~~~~~~l~~fi~~~~~~ 657 (780)
T 3apo_A 640 WNRDAYSLRSWGLGFLPQ 657 (780)
T ss_dssp SCCSHHHHHHHHHTTSCC
T ss_pred CCCCHHHHHHHHhhhccc
Confidence 89999999999998753
No 6
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1.6e-32 Score=259.18 Aligned_cols=224 Identities=20% Similarity=0.307 Sum_probs=198.6
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccC---CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccch
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSS---PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAK 77 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~---~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~ 77 (272)
++|.+||.....|.|.+++.++|++++.. +..++|.||++| ++|+++.|.|.++|+.+++++.|+.+||+.+ .
T Consensus 531 ~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~---~ 607 (780)
T 3apo_A 531 EQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQY---H 607 (780)
T ss_dssp HHHHHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTT---H
T ss_pred HHHHHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcch---H
Confidence 57899999998899999999999998754 467899999999 9999999999999999999999999999998 8
Q ss_pred hHHhhcCCCCCCceEEEEEeCCcc---eeecCCC-CCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchh
Q 024107 78 PFLTLFGLEESKNTVVTAFDNKAI---SKFLLES-DLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFD 153 (272)
Q Consensus 78 ~l~~~~~i~~~~P~i~~~~~~~~~---~~~~~~g-~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 153 (272)
.+|+.++|+++ |++ .++..+.. ....|.| .++.++|.+|+.+.+.+ .+..++.++|.
T Consensus 608 ~l~~~~~v~~~-Pti-~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~-----------------~v~~l~~~~~~ 668 (780)
T 3apo_A 608 SFCTQENVQRY-PEI-RFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQ-----------------ASIDLTPQTFN 668 (780)
T ss_dssp HHHHHTTCCSS-SEE-EEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCC-----------------CSEEECHHHHH
T ss_pred HHHHHcCCCCC-CeE-EEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhccc-----------------ccccCCHHHHH
Confidence 99999999999 999 88876543 2344688 89999999999987532 37788999999
Q ss_pred HHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCcCceE
Q 024107 154 DLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIK 231 (272)
Q Consensus 154 ~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~ 231 (272)
+.+...+++++|.||++||++|+.+.|.+.++++.+++ ++.++.+|++.+ .+ .+++|.++|++++|++|+... +
T Consensus 669 ~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~--~ 744 (780)
T 3apo_A 669 EKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKK--S 744 (780)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTTT--E
T ss_pred HHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCccc--c
Confidence 88878889999999999999999999999999999987 799999999998 56 489999999999999888765 5
Q ss_pred eeC----CCCHHHHHHHHHHHcCc
Q 024107 232 VSA----RSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 232 ~~g----~~~~~~l~~~i~~~~~~ 251 (272)
+.| ..+.+.|.+||++.+..
T Consensus 745 ~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 745 IWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp EEEEEECCCCHHHHHHHHHHHTTC
T ss_pred ccCcccCCcCHHHHHHHHHHHHHH
Confidence 666 57999999999999853
No 7
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.97 E-value=4.4e-31 Score=213.69 Aligned_cols=195 Identities=13% Similarity=0.163 Sum_probs=161.3
Q ss_pred CcceEEEEEEc-c-cchHHHHHHHHHHHHHhcCceEEEEEeCCC--cccchhHHhhcCCCCCCceEEEEEeCCcceeecC
Q 024107 31 PIKLQVYVFAK-A-DDLKSLLEPLEDIARNFKGKIMFTAVDIAD--EDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLL 106 (272)
Q Consensus 31 ~~~~~v~fy~~-~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~--~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~ 106 (272)
+..++++||++ | ++|+++.|.|.++|+. .+++.|+.|||+. + +++|++|||.++ ||+ .++.+++.....|
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~---~~~~~~~~v~~~-Pt~-~~~~~g~~~~~~~ 95 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEG---KELAKRYRIDRA-PAT-TITQDGKDFGVRY 95 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHH---HHHHHHTTCCSS-SEE-EEEETTBCCSEEE
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCccc---HHHHHHcCCCcC-ceE-EEEcCCceeeEEE
Confidence 34567899999 9 9999999999999965 5679999999998 7 899999999999 999 8887665333455
Q ss_pred CCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCCcE-EEEEECCCChhHHHhHHHHHHH
Q 024107 107 ESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDV-LLEVYTPWCVTCETTSKQIEKL 185 (272)
Q Consensus 107 ~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~~~-lv~f~~~~C~~c~~~~~~~~~~ 185 (272)
.|.++.+.+.+|+...+...- ....++.+++..+. ..++++ +|.||++||++|+.+.|.|.++
T Consensus 96 ~G~~~~~~l~~~l~~~l~~~~---------------~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~p~~~~l 159 (226)
T 1a8l_A 96 FGLPAGHEFAAFLEDIVDVSR---------------EETNLMDETKQAIR-NIDQDVRILVFVTPTCPYCPLAVRMAHKF 159 (226)
T ss_dssp ESCCCTTHHHHHHHHHHHHHH---------------TCCCCCHHHHHHHT-TCCSCEEEEEEECSSCTTHHHHHHHHHHH
T ss_pred eccCcHHHHHHHHHHHHhhcC---------------CCCCCCHHHHHHHH-hcCCCcEEEEEeCCCCCccHHHHHHHHHH
Confidence 788899999999999764211 12346677777754 445666 9999999999999999999999
Q ss_pred HHHhcC--CCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 186 AKHFKG--LDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 186 a~~~~~--~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+..+.+ .+++.++.+|++.+ ++ .+++|.++|++++|++|+.. .++.|..+.+.|.+||++.+
T Consensus 160 ~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 160 AIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDR--VEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEE--EEEESCCCHHHHHHHHHHHH
T ss_pred HHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCcee--EEEcCCCCHHHHHHHHHHhh
Confidence 999971 12799999999998 56 48999999999999988754 37999999999999999875
No 8
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.97 E-value=1e-29 Score=206.06 Aligned_cols=198 Identities=13% Similarity=0.142 Sum_probs=163.8
Q ss_pred ccccc--cCCcceEEEEE-----Ecc-cchHHHHHHHHHHHHHh--cCceEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 24 SASVH--SSPIKLQVYVF-----AKA-DDLKSLLEPLEDIARNF--KGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 24 f~~~~--~~~~~~~v~fy-----~~~-~~c~~~~~~~~~~a~~~--~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
+.+++ ....+++|.|| ++| ++|+.+.|.|.++|+.+ .+++.|+.|||+.+ +++|++|||+++ ||+
T Consensus 11 l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Ptl- 85 (229)
T 2ywm_A 11 LKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH---KEETEKYGVDRV-PTI- 85 (229)
T ss_dssp HHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC---HHHHHHTTCCBS-SEE-
T ss_pred HHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc---HHHHHHcCCCcC-cEE-
Confidence 44445 34567777877 899 99999999999999998 67899999999998 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCCcE-EEEEECCCC
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDV-LLEVYTPWC 172 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~~~-lv~f~~~~C 172 (272)
.+|.++ .....|.|.++.+.+..|+...+... ..+..++.++|++.+ ..++++ ++.||++||
T Consensus 86 ~~~~~~-~~~~~~~G~~~~~~l~~~~~~~~~~~---------------~~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC 148 (229)
T 2ywm_A 86 VIEGDK-DYGIRYIGLPAGLEFTTLINGIFHVS---------------QRKPQLSEKTLELLQ-VVDIPIEIWVFVTTSC 148 (229)
T ss_dssp EEESSS-CCCEEEESCCCTTHHHHHHHHHHHHH---------------TTCCSCCHHHHHHHT-TCCSCEEEEEEECTTC
T ss_pred EEECCC-cccceecCCccHHHHHHHHHHHHhcc---------------CCccCCCHHHHHHHH-hcCCCeEEEEEECCCC
Confidence 888643 34455689999999999999976411 123456788888876 444555 889999999
Q ss_pred hhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 173 VTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 173 ~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++|+.+.|.+.+++..+ + ++.++.+|++.+ ++ .+++|.++|++++ +|+ . .++.|..+.+.|.+||++.++
T Consensus 149 ~~C~~~~~~~~~~~~~~-~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~--~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 149 GYCPSAAVMAWDFALAN-D--YITSKVIDASENQDLAEQFQVVGVPKIVI--NKG-V--AEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp TTHHHHHHHHHHHHHHC-T--TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-T--EEEESCCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHC-C--CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCE-E--EEeeCCCCHHHHHHHHHHHhh
Confidence 99999999999999998 3 799999999998 66 4899999999998 555 3 369999999999999999875
Q ss_pred c
Q 024107 251 E 251 (272)
Q Consensus 251 ~ 251 (272)
.
T Consensus 221 ~ 221 (229)
T 2ywm_A 221 K 221 (229)
T ss_dssp H
T ss_pred h
Confidence 3
No 9
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.94 E-value=1.1e-25 Score=183.72 Aligned_cols=202 Identities=12% Similarity=0.131 Sum_probs=158.4
Q ss_pred cccccccC-CcceEEEEEEcc---cchHHHHHHHHHHHHH---hcCc--eEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 23 NSASVHSS-PIKLQVYVFAKA---DDLKSLLEPLEDIARN---FKGK--IMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 23 ~f~~~~~~-~~~~~v~fy~~~---~~c~~~~~~~~~~a~~---~~~~--i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
.+.++++. .++++|.||++| ++|+.+.+.+.++|+. ++++ +.|+.+|++++ +++|++|||.++ ||+
T Consensus 16 ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~---~~~~~~~gv~~~-Pt~- 90 (243)
T 2hls_A 16 ELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESD---SDKFSEFKVERV-PTV- 90 (243)
T ss_dssp HHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTT---HHHHHHTTCCSS-SEE-
T ss_pred HHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcC---HHHHHhcCCCcC-CEE-
Confidence 35555533 368999999998 8899999999999998 4444 99999999998 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCCcEEEEEECCCCh
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCV 173 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~ 173 (272)
.++ ++ +.+| .|....+.+..|+..++.+.-.+ ..++.+.++.+....++.+++.||+|||+
T Consensus 91 ~i~-~g-~~~~--~G~~~~~~l~~fv~~~l~~~~~~---------------~~l~~~~~~~~~~~~~~~~vv~F~a~wC~ 151 (243)
T 2hls_A 91 AFL-GG-EVRW--TGIPAGEEIRALVEVIMRLSEDE---------------SGLEDATKEALKSLKGRVHIETIITPSCP 151 (243)
T ss_dssp EET-TT-TEEE--ESCCCTTHHHHHHHHHHHHHTTC---------------CCCCHHHHHHHHHCCSCEEEEEEECSSCS
T ss_pred EEE-CC-ceeE--cCCCcHHHHHHHHHHHHhccCCC---------------CCCCHHHHHHHHHcCCCcEEEEEECCCCC
Confidence 788 33 4455 77778889999999876421110 11333444443323356678999999999
Q ss_pred hHHHhHHHHHHHHHHhc--CCCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 174 TCETTSKQIEKLAKHFK--GLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 174 ~c~~~~~~~~~~a~~~~--~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+|+.+.|.|.+++..+. +.+++.++.+|++.+ ++ .+++|.++||+++ +|+ +.|.|..+.+.|.++|.+.+
T Consensus 152 ~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~----~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 152 YCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGY----LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTE----EEEESCCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCE----EEEeCCCCHHHHHHHHHHHh
Confidence 99999999999999983 212799999999998 66 4899999999988 553 25999999999999999998
Q ss_pred CcCCC
Q 024107 250 KEKDQ 254 (272)
Q Consensus 250 ~~~~~ 254 (272)
+....
T Consensus 226 ~~~~~ 230 (243)
T 2hls_A 226 EGRLT 230 (243)
T ss_dssp TTCCC
T ss_pred hcccc
Confidence 86543
No 10
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.93 E-value=2.2e-25 Score=192.67 Aligned_cols=209 Identities=18% Similarity=0.259 Sum_probs=171.2
Q ss_pred hcCCCceEeeCcccccccccCCcceEEEEEEcc-cchHHHH------HHHHHHHHHhcC-ceEEEEEeCCCcccchhHHh
Q 024107 10 YNKFPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLL------EPLEDIARNFKG-KIMFTAVDIADEDLAKPFLT 81 (272)
Q Consensus 10 ~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~------~~~~~~a~~~~~-~i~~~~vd~~~~~~~~~l~~ 81 (272)
....+.|.+||+++|++.+.++++++|.||++| ++|.... |.|+++|..+.+ .+.|+.|||+.+ +++|+
T Consensus 9 ~~~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~---~~l~~ 85 (367)
T 3us3_A 9 YDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD---AAVAK 85 (367)
T ss_dssp CCCCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT---HHHHH
T ss_pred CCCCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc---HHHHH
Confidence 344567999999999999988899999999999 8873332 689999999987 499999999999 89999
Q ss_pred hcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecc-cchhHHhhcCC
Q 024107 82 LFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVG-KTFDDLVLNSH 160 (272)
Q Consensus 82 ~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~v~~~~ 160 (272)
+|||.++ ||+ .+|.++.. ..|.|.++.+.|.+|+.+.+.. .+..+++ +++++++...+
T Consensus 86 ~~~V~~~-PTl-~~f~~G~~--~~y~G~~~~~~i~~~i~~~~~~-----------------~v~~i~~~~~~~~~~~~~~ 144 (367)
T 3us3_A 86 KLGLTEE-DSI-YVFKEDEV--IEYDGEFSADTLVEFLLDVLED-----------------PVELIEGERELQAFENIED 144 (367)
T ss_dssp HHTCCST-TEE-EEEETTEE--EECCSCCSHHHHHHHHHHHHSC-----------------SEEECCSHHHHHHHHHCCS
T ss_pred HcCCCcC-ceE-EEEECCcE--EEeCCCCCHHHHHHHHHHhcCC-----------------CcEEcCCHHHHHHHhccCC
Confidence 9999999 999 88887643 4669999999999999998653 3666754 77888874356
Q ss_pred CcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEEeCCCCcCceEeeCC-CCH
Q 024107 161 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSAR-SSS 238 (272)
Q Consensus 161 ~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~-~~~ 238 (272)
+.++|.|+++||. ...+.|.++|..+++ ++.|+.+... ++ .+++++. |++++|+.+... ++.|.|. .+.
T Consensus 145 ~~~vv~ff~~~~~---~~~~~f~~~A~~~~~--~~~F~~~~~~--~~~~~~~v~~-p~i~lf~~~~~~-~~~y~g~~~~~ 215 (367)
T 3us3_A 145 EIKLIGYFKNKDS---EHYKAFKEAAEEFHP--YIPFFATFDS--KVAKKLTLKL-NEIDFYEAFMEE-PVTIPDKPNSE 215 (367)
T ss_dssp SCEEEEECSCTTC---HHHHHHHHHHHHHTT--TSCEEEECCH--HHHHHHTCCT-TCEEEECTTCSS-CEECSSSSCCH
T ss_pred CcEEEEEECCCCc---hHHHHHHHHHHhhcC--CcEEEEECCH--HHHHHcCCCC-CeEEEEcCCCCC-CeecCCCCCCH
Confidence 7889999999865 456789999999987 7888887532 33 3667774 999999886544 6689995 899
Q ss_pred HHHHHHHHHHcCc
Q 024107 239 KNIAAFIKEQLKE 251 (272)
Q Consensus 239 ~~l~~~i~~~~~~ 251 (272)
+.|.+||.++.-.
T Consensus 216 ~~l~~fi~~~~~p 228 (367)
T 3us3_A 216 EEIVNFVEEHRRS 228 (367)
T ss_dssp HHHHHHHHHTCSC
T ss_pred HHHHHHHHHcCcc
Confidence 9999999998654
No 11
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.93 E-value=3.4e-24 Score=186.38 Aligned_cols=206 Identities=11% Similarity=0.130 Sum_probs=152.1
Q ss_pred CceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHh------cCceEEEEEeCCCcccchhHHhhcCCC
Q 024107 14 PLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNF------KGKIMFTAVDIADEDLAKPFLTLFGLE 86 (272)
Q Consensus 14 ~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~------~~~i~~~~vd~~~~~~~~~l~~~~~i~ 86 (272)
+.|..|++++|.+.+.++++++|.||++| ++|+++.|.|.++|+.+ .+.+.|+.|||+.+ .++|++|||.
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~---~~l~~~~~v~ 81 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH---SDIAQRYRIS 81 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC---HHHHHHTTCC
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc---HHHHHhcCCC
Confidence 35788999999998888899999999999 99999999999999998 34599999999999 8999999999
Q ss_pred CCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecc-cchhHHhhcCCCcEEE
Q 024107 87 ESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVG-KTFDDLVLNSHKDVLL 165 (272)
Q Consensus 87 ~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~v~~~~~~~lv 165 (272)
++ ||+ .+|.++......|.|.++.+.|.+|+.+.+... +..+++ +++++ + ..++.++|
T Consensus 82 ~~-Pt~-~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~-----------------v~~l~~~~~l~~-l-~~~~~~~v 140 (382)
T 2r2j_A 82 KY-PTL-KLFRNGMMMKREYRGQRSVKALADYIRQQKSDP-----------------IQEIRDLAEITT-L-DRSKRNII 140 (382)
T ss_dssp EE-SEE-EEEETTEEEEEECCSCCSHHHHHHHHHHHHSCC-----------------CEEC--------------CCEEE
T ss_pred cC-CEE-EEEeCCcEeeeeecCcchHHHHHHHHHHhccCC-----------------ceecCCHHHHHH-h-cCCCCEEE
Confidence 99 999 788876543324699999999999999987532 444543 45666 3 55677888
Q ss_pred EEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCcccCCCeEEEEeCCCCcCceEeeCCC-CHHHHHHH
Q 024107 166 EVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLFYPAGDKANPIKVSARS-SSKNIAAF 244 (272)
Q Consensus 166 ~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~~~~~v~~~P~l~~~~~~~~~~~~~~~g~~-~~~~l~~~ 244 (272)
.|+++++..+ ...|.++|..+++ ++.|+..... -...+++++.| +++++.+....++.|.|.. +.+.|.+|
T Consensus 141 ~ff~~~~~~~---~~~f~~~A~~~~~--~~~F~~~~~~--~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~f 212 (382)
T 2r2j_A 141 GYFEQKDSDN---YRVFERVANILHD--DCAFLSAFGD--VSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNW 212 (382)
T ss_dssp EEESCSSSHH---HHHHHHHHHHHTT--TCEEEEEESC--C--------CE-EEEECSSSSSCCEECCSCTTCHHHHHHH
T ss_pred EEECCCCChh---HHHHHHHHHHhhc--cceEEEEehh--hHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHH
Confidence 8888886553 5679999999988 6788777662 12467888899 6666554333466899998 89999999
Q ss_pred HHHHcCc
Q 024107 245 IKEQLKE 251 (272)
Q Consensus 245 i~~~~~~ 251 (272)
|+++...
T Consensus 213 i~~~~~p 219 (382)
T 2r2j_A 213 IQDKCVP 219 (382)
T ss_dssp HHHHHSC
T ss_pred HHhcccC
Confidence 9987653
No 12
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.93 E-value=1.2e-24 Score=187.10 Aligned_cols=205 Identities=19% Similarity=0.231 Sum_probs=169.2
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHH-------HHHHHHHhcC-ceEEEEEeCCCcccchhHHhhc
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEP-------LEDIARNFKG-KIMFTAVDIADEDLAKPFLTLF 83 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~-------~~~~a~~~~~-~i~~~~vd~~~~~~~~~l~~~~ 83 (272)
.+.|.++++++|++.+.++++++|.||++| + |+++.|. |.++|+.+.+ .+.|+.|||+.+ +++|++|
T Consensus 10 ~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~---~~l~~~~ 85 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE---AKLAKKL 85 (350)
T ss_dssp CCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT---HHHHHHH
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC---HHHHHhc
Confidence 346889999999999988899999999999 8 9888888 9999999987 499999999999 8999999
Q ss_pred CCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEec-ccchhHHhhcCCCc
Q 024107 84 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVV-GKTFDDLVLNSHKD 162 (272)
Q Consensus 84 ~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~-~~~~~~~v~~~~~~ 162 (272)
||.++ ||+ .+|.++. ...|.|.++.+.|.+|+.+.+.. .+..++ .+++++++..++..
T Consensus 86 ~v~~~-Pt~-~~~~~g~--~~~~~G~~~~~~l~~~i~~~~~~-----------------~~~~l~~~~~~~~~~~~~~~~ 144 (350)
T 1sji_A 86 GFDEE-GSL-YVLKGDR--TIEFDGEFAADVLVEFLLDLIED-----------------PVEIINSKLEVQAFERIEDQI 144 (350)
T ss_dssp TCCST-TEE-EEEETTE--EEEECSCCCHHHHHHHHHTTSSC-----------------SEEECCSHHHHHHHHHCCSSC
T ss_pred CCCcc-ceE-EEEECCc--EEEecCCCCHHHHHHHHHHhcCC-----------------cceeccchHHHHHHhccCCCc
Confidence 99999 999 8887765 44568999999999999987642 366675 46788876414567
Q ss_pred EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEEeCCCCcCceEeeCC-CCHHH
Q 024107 163 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSAR-SSSKN 240 (272)
Q Consensus 163 ~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~-~~~~~ 240 (272)
++|.|++++|.. ..+.|.++|..+++ ++.|+.++.. ++ .+++++ +|++++|+.+... ++.|.|. .+.++
T Consensus 145 ~vv~ff~~~~~~---~~~~~~~~A~~~~~--~~~f~~~~~~--~~~~~~~v~-~p~i~~~~~~~~~-~~~y~g~~~~~~~ 215 (350)
T 1sji_A 145 KLIGFFKSEESE---YYKAFEEAAEHFQP--YIKFFATFDK--GVAKKLSLK-MNEVDFYEPFMDE-PIAIPDKPYTEEE 215 (350)
T ss_dssp EEEEECSCTTSH---HHHHHHHHHHHTTT--TSEEEEECCH--HHHHHHTCC-TTCEEEECTTCSS-CEECSSSSCCHHH
T ss_pred EEEEEECCCCcH---HHHHHHHHHHhhcc--CcEEEEECCH--HHHHHcCCC-CCcEEEEeCCCCC-ceecCCCCCCHHH
Confidence 889999998654 46789999999987 7899887422 34 367888 9999999876544 5689997 89999
Q ss_pred HHHHHHHHcCc
Q 024107 241 IAAFIKEQLKE 251 (272)
Q Consensus 241 l~~~i~~~~~~ 251 (272)
|.+||.++.-.
T Consensus 216 l~~fi~~~~~p 226 (350)
T 1sji_A 216 LVEFVKEHQRP 226 (350)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHcCcc
Confidence 99999997653
No 13
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.2e-23 Score=176.72 Aligned_cols=214 Identities=14% Similarity=0.176 Sum_probs=169.8
Q ss_pred CCCceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 12 KFPLVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
+.+.|.+|+.++|++.+ ..+++++|.||++| ++|+++.|.|.++|+.+.+.+.|+.|||+...+ .++|++|||.++
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~-~~l~~~~~I~~~- 92 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKN-KALCAKYDVNGF- 92 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTT-HHHHHHTTCCBS-
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccC-HHHHHhCCCCcc-
Confidence 45678999999999988 56788999999999 999999999999999999889999999984322 799999999999
Q ss_pred ceEEEEEeCCc----------------ceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecc-cch
Q 024107 90 NTVVTAFDNKA----------------ISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVG-KTF 152 (272)
Q Consensus 90 P~i~~~~~~~~----------------~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~ 152 (272)
||+ .+|.+++ .....|.|.++.+.|.+|+.+.+.. .+..++. +++
T Consensus 93 Pt~-~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~-----------------~v~~i~~~~~l 154 (298)
T 3ed3_A 93 PTL-MVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRS-----------------YVKKFVRIDTL 154 (298)
T ss_dssp SEE-EEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCC-----------------CEEECSCGGGH
T ss_pred ceE-EEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhccc-----------------ccEEcCCHHHH
Confidence 999 7887764 1355679999999999999997643 3566644 678
Q ss_pred hHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC---CCC-----cc-----------
Q 024107 153 DDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH---PKL-----QV----------- 212 (272)
Q Consensus 153 ~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~---~~~-----~v----------- 212 (272)
++++...+.+.+++|... ....+.|..+|..+.+ .+.|+.++.... .. .++ +|
T Consensus 155 ~~~l~~~~~~~vi~fs~~-----~~~~~~f~~~A~~~~~--~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~ 227 (298)
T 3ed3_A 155 GSLLRKSPKLSVVLFSKQ-----DKISPVYKSIALDWLG--KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQ 227 (298)
T ss_dssp HHHHTSCSSEEEEEEESS-----SSCCHHHHHHHHHTBT--TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCceEEEEEcCC-----CcchHHHHHHHHHhhc--CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccc
Confidence 888755566777777332 2345789999999998 899999986543 22 122 23
Q ss_pred --cCCCeEEEEeCCCCcCceEeeC-CCCHHHHHHHHHHHcCcCC
Q 024107 213 --EEYPTLLFYPAGDKANPIKVSA-RSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 213 --~~~P~l~~~~~~~~~~~~~~~g-~~~~~~l~~~i~~~~~~~~ 253 (272)
...|++++|+..... ++.|.| ..+.+.|.+||.+..+..+
T Consensus 228 ~~~~~P~lv~~~~~~~~-~~~y~g~~~~~~~i~~fi~~~~~~~p 270 (298)
T 3ed3_A 228 RQSDKSKLVVFDADKDK-FWEYEGNSINKNDISKFLRDTFSITP 270 (298)
T ss_dssp TTCSSCEEEEEETTTTE-EEECCCSSCCHHHHHHHHHHHHTCCC
T ss_pred cccCCCeEEEEcCCCCc-eEEeccccCCHHHHHHHHHhhcCCCC
Confidence 678999999876554 678996 5899999999997766533
No 14
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.89 E-value=5.7e-22 Score=177.38 Aligned_cols=205 Identities=16% Similarity=0.182 Sum_probs=165.5
Q ss_pred ceEeeCcccccccccCC---cceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCc
Q 024107 15 LVTKLTDINSASVHSSP---IKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 90 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~~~---~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P 90 (272)
.|..||.++|.+.+..+ ++++|.||++| ++|+++.|.|.++|+.+.+.+.|+.|||+.+ +++|++|||.++ |
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-P 77 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTAN---TNTCNKYGVSGY-P 77 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTC---HHHHHHTTCCEE-S
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCC---HHHHHhcCCCCC-C
Confidence 47889999999988777 89999999999 9999999999999999999899999999999 899999999999 9
Q ss_pred eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEe-cccchhHHhhcCCCcEEEEEEC
Q 024107 91 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIV-VGKTFDDLVLNSHKDVLLEVYT 169 (272)
Q Consensus 91 ~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~v~~~~~~~lv~f~~ 169 (272)
|+ .+|.++. ....|.|.++.+.|.+|+.+.+.. .+..+ +.+++.+++ ..+..++|.|+.
T Consensus 78 tl-~~~~~g~-~~~~~~G~~~~~~l~~~~~~~~~~-----------------~~~~i~~~~~~~~~~-~~~~~~vv~~~~ 137 (481)
T 3f8u_A 78 TL-KIFRDGE-EAGAYDGPRTADGIVSHLKKQAGP-----------------ASVPLRTEEEFKKFI-SDKDASIVGFFD 137 (481)
T ss_dssp EE-EEEETTE-EEEECCSCSSHHHHHHHHHHHTSC-----------------SEEEECSHHHHHHHT-TSSSCEEEEEES
T ss_pred EE-EEEeCCc-eeeeecCccCHHHHHHHHHhhccc-----------------CceecCCHHHHHHHH-hcCCcEEEEEEC
Confidence 99 8887663 345569999999999999998753 35566 446677765 456778888888
Q ss_pred CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEEeCC-----CCcCceEee-CCCCHHHHH
Q 024107 170 PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAG-----DKANPIKVS-ARSSSKNIA 242 (272)
Q Consensus 170 ~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~~~~-----~~~~~~~~~-g~~~~~~l~ 242 (272)
++|..+ ...|.++|..+++ ++.|+.++.. ++ .+++++..| +++|+.+ ....++.|. |..+.+.|.
T Consensus 138 ~~~~~~---~~~f~~~a~~~~~--~~~F~~~~~~--~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~ 209 (481)
T 3f8u_A 138 DSFSEA---HSEFLKAASNLRD--NYRFAHTNVE--SLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIK 209 (481)
T ss_dssp CTTCHH---HHHHHHHHHHHTT--TSCEEEECCH--HHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHH
T ss_pred CCccch---HHHHHHHHHHhcc--CceEEEECCH--HHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHHHHH
Confidence 886654 6789999999987 7888876422 33 366777655 7777621 111256788 778999999
Q ss_pred HHHHHHcCc
Q 024107 243 AFIKEQLKE 251 (272)
Q Consensus 243 ~~i~~~~~~ 251 (272)
+||..+.-.
T Consensus 210 ~fi~~~~~p 218 (481)
T 3f8u_A 210 KFIQENIFG 218 (481)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHhCCC
Confidence 999998653
No 15
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.89 E-value=1.2e-22 Score=150.63 Aligned_cols=125 Identities=22% Similarity=0.316 Sum_probs=115.1
Q ss_pred hcCCCceEeeCcccccccccCCcceEEEEEEcccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC--
Q 024107 10 YNKFPLVTKLTDINSASVHSSPIKLQVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE-- 87 (272)
Q Consensus 10 ~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~-- 87 (272)
.++.|++.++|+++|.++++++.+++|.||++|++|+.+.|.++++|+++.+++.|+.+|.+++ +++++.|||.+
T Consensus 2 ~c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~---~~~a~~~gi~~~~ 78 (133)
T 2djk_A 2 PLGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKAF---GAHAGNLNLKTDK 78 (133)
T ss_dssp CCSCCCSEECCHHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTTT---GGGTTTTTCCSSS
T ss_pred CcccCceeccChHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHHh---HHHHHHcCCCccc
Confidence 3688999999999999998888899999999999999999999999999999999999999988 89999999999
Q ss_pred CCceEEEEEeCCcceeecCC--CCCChHHHHHHHHHHhcCccccccccCCCCCC
Q 024107 88 SKNTVVTAFDNKAISKFLLE--SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDN 139 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~--g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~ 139 (272)
. ||+ +++...++.+|.+. |..+.+.|.+|+.+++.|+++++++|+++|++
T Consensus 79 i-Ptl-~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~ 130 (133)
T 2djk_A 79 F-PAF-AIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEK 130 (133)
T ss_dssp S-SEE-EEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTT
T ss_pred C-CEE-EEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCc
Confidence 8 999 88886445567765 89999999999999999999999999999985
No 16
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.87 E-value=6.1e-21 Score=171.67 Aligned_cols=199 Identities=13% Similarity=0.151 Sum_probs=160.7
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchhHHhhcCCCCCCc
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLFGLEESKN 90 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~~~~l~~~~~i~~~~P 90 (272)
.+.|..+++++|++.+.++++++|.||++| ++|+++.|.|.++|+.+.+. +.|+.|||+.+ +++|++|||.++ |
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-P 88 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN---QDLCMEHNIPGF-P 88 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC---HHHHHHTTCCSS-S
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHhcCCCcC-C
Confidence 456889999999999988999999999999 99999999999999999985 99999999999 899999999999 9
Q ss_pred eEEEEEeCCcce-eecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCC--CcEEEEE
Q 024107 91 TVVTAFDNKAIS-KFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSH--KDVLLEV 167 (272)
Q Consensus 91 ~i~~~~~~~~~~-~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~--~~~lv~f 167 (272)
|+ .+|.++... ...|.|.++.+.|.+|+.+.+.. .+..++. +++++.... ..++++|
T Consensus 89 t~-~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~-----------------~v~~i~~--~~~~~~~~~~~~~~v~~f 148 (504)
T 2b5e_A 89 SL-KIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQP-----------------AVAVVAD--LPAYLANETFVTPVIVQS 148 (504)
T ss_dssp EE-EEEETTCTTCEEECCSCCSHHHHHHHHHHHTSC-----------------SEEECSC--HHHHHHHSCCSSCEEEEE
T ss_pred EE-EEEeCCccccceeecCCCCHHHHHHHHHHhcCC-----------------cceeHHH--HHHHHhcCCCceEEEEEe
Confidence 99 888876531 55679999999999999998753 3666666 777775544 4455555
Q ss_pred ECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEEeCCCCcCceEeeCC-C---CHHHHH
Q 024107 168 YTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSAR-S---SSKNIA 242 (272)
Q Consensus 168 ~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~-~---~~~~l~ 242 (272)
.... ......|..+|..+++ ++.|+.++ ++ .+++++ +++|+... .++.|.|. . +.+.|.
T Consensus 149 -~~~~---~~~~~~f~~~A~~~~~--~~~F~~~~----~~~~~~~~~----i~l~~~~~--~~~~~~g~~~~~~~~~~l~ 212 (504)
T 2b5e_A 149 -GKID---ADFNATFYSMANKHFN--DYDFVSAE----NADDDFKLS----IYLPSAMD--EPVVYNGKKADIADADVFE 212 (504)
T ss_dssp -ESCC---HHHHHHHHHHHHHTTT--TCEEEEEE----CTTSCCEEE----EEETTEEE--EEEECCSCHHHHTSHHHHH
T ss_pred -CCCC---chHHHHHHHHHHHhhc--CcEEEEEH----HHHHhcCCe----EEecCCCC--cccccCCcccccCCHHHHH
Confidence 4443 3456789999999987 78999888 33 356665 66775533 35678887 6 899999
Q ss_pred HHHHHHcCc
Q 024107 243 AFIKEQLKE 251 (272)
Q Consensus 243 ~~i~~~~~~ 251 (272)
+||..+.-.
T Consensus 213 ~fi~~~~~p 221 (504)
T 2b5e_A 213 KWLQVEALP 221 (504)
T ss_dssp HHHHHHSSC
T ss_pred HHHHhcccC
Confidence 999987543
No 17
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.86 E-value=1.3e-20 Score=162.54 Aligned_cols=215 Identities=15% Similarity=0.183 Sum_probs=171.1
Q ss_pred HHHHHhhcCCCceEeeC-cccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHh
Q 024107 4 ILQFLNYNKFPLVTKLT-DINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLT 81 (272)
Q Consensus 4 l~~fi~~~s~~~v~~l~-~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~ 81 (272)
|..|+.....+.+.+++ .++++++++....++|.||.+. ..+ ...|.++|..+ +.+.|+. ... .++|+
T Consensus 7 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~---t~~---~~v~~ 76 (361)
T 3uem_A 7 LEVLFQGPGSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGI---TSN---SDVFS 76 (361)
T ss_dssp GGGGTSCCCCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEE---ECC---HHHHH
T ss_pred eeEEecCCccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEE---ECc---HHHHH
Confidence 44555556666777884 4778888888878888888766 443 36799999999 4588874 444 68999
Q ss_pred hcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCC
Q 024107 82 LFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHK 161 (272)
Q Consensus 82 ~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~ 161 (272)
++|++. |++ .+|..-...+..|.|..+.++|.+|+.....+ .+..++.+++.+.+....+
T Consensus 77 ~~~v~~--~~i-~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p-----------------~v~~~~~~~~~~~~~~~~~ 136 (361)
T 3uem_A 77 KYQLDK--DGV-VLFKKFDEGRNNFEGEVTKENLLDFIKHNQLP-----------------LVIEFTEQTAPKIFGGEIK 136 (361)
T ss_dssp HTTCSS--SEE-EEEESSTTSEEECCSCCCHHHHHHHHHHHSSC-----------------SEEECSTTTHHHHHSCSCC
T ss_pred HhCCCC--CeE-EEEEecCCCccccCCcCCHHHHHHHHHHcCCC-----------------cceecCcccHHHHhcCCCC
Confidence 999976 888 67765333455668999999999999997432 4888999999998766667
Q ss_pred cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC--CC-CC-CCCcccC--CCeEEEEeCCCCcCceEee--
Q 024107 162 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS--AN-EH-PKLQVEE--YPTLLFYPAGDKANPIKVS-- 233 (272)
Q Consensus 162 ~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~--~~-~~-~~~~v~~--~P~l~~~~~~~~~~~~~~~-- 233 (272)
.++|+||++||+.|+.+.+.|+++|+.+++ ++.|+.+|++ .+ .+ ..+++.. +|++++|..++... +|.
T Consensus 137 ~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~--~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~--ky~~~ 212 (361)
T 3uem_A 137 THILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMT--KYKPE 212 (361)
T ss_dssp EEEEEECCSSSSSHHHHHHHHHHHHGGGTT--TCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CC--EECCS
T ss_pred cEEEEEEeCCchhHHHHHHHHHHHHHHccC--ceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCccc--ccCCC
Confidence 889999999999999999999999999998 7999999999 44 44 4789987 99999998866543 676
Q ss_pred -CCCCHHHHHHHHHHHcCcC
Q 024107 234 -ARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 234 -g~~~~~~l~~~i~~~~~~~ 252 (272)
|..+.+.|.+|+.+.+...
T Consensus 213 ~~~~~~~~l~~fi~~~l~g~ 232 (361)
T 3uem_A 213 SEELTAERITEFCHRFLEGK 232 (361)
T ss_dssp SCCCCHHHHHHHHHHHHTTC
T ss_pred ccccCHHHHHHHHHHHhcCC
Confidence 7899999999999988643
No 18
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.85 E-value=8.4e-21 Score=139.35 Aligned_cols=109 Identities=23% Similarity=0.427 Sum_probs=97.3
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcC---CCceEEEEEeCCCC-CCC-CCcccC
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKG---LDNLVIAKIDASAN-EHP-KLQVEE 214 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~---~~~v~~~~id~~~~-~~~-~~~v~~ 214 (272)
....+..+++++|++.+.+++++++|+||++||++|+.+.|.|.+++..+.. .+++.++.+|++.+ +++ +++|.+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 4557999999999999877789999999999999999999999999998742 22799999999999 664 899999
Q ss_pred CCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 215 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 215 ~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
+|++++|++|+...+++|.|..+.+.|.+||.++
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999999877567899999999999999875
No 19
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.85 E-value=8.8e-20 Score=148.97 Aligned_cols=219 Identities=13% Similarity=0.114 Sum_probs=158.9
Q ss_pred CCCceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC---ceEEEEEeCCCcccchhHHhhcCCC
Q 024107 12 KFPLVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG---KIMFTAVDIADEDLAKPFLTLFGLE 86 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~---~i~~~~vd~~~~~~~~~l~~~~~i~ 86 (272)
....+.+++.++|.+.+ .++++++|.||++| ++|+++.|.|.++++.+.+ .+.|+.|||+...+ .++|++|||.
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~-~~l~~~~~v~ 88 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN-SAVCRDFNIP 88 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT-HHHHHHTTCC
T ss_pred CCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh-HHHHHHcCCC
Confidence 35578999999999855 56689999999999 9999999999999999987 79999999953222 8999999999
Q ss_pred CCCceEEEEEeCCc----ceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcC-CC
Q 024107 87 ESKNTVVTAFDNKA----ISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNS-HK 161 (272)
Q Consensus 87 ~~~P~i~~~~~~~~----~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~-~~ 161 (272)
++ ||+ .++.+++ +....+.| .+.+.|.+++.+.+.... +..|. ....+..++..++..++... .+
T Consensus 89 ~~-Pt~-~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~------~~~p~-~~p~l~~~~~~~l~~~~~~~~~~ 158 (244)
T 3q6o_A 89 GF-PTV-RFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH------DTWPP-ACPPLEPAXLEEIDGFFARNNEE 158 (244)
T ss_dssp SS-SEE-EEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT------TSCCT-TSCCCSCCCHHHHHTHHHHCCCS
T ss_pred cc-CEE-EEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc------ccCCC-CCCCcccccHHHHHHHhhcCCCc
Confidence 99 999 8887642 23334455 799999999999987432 11221 11234445667777766443 56
Q ss_pred cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEEeCCCCcCceEeeC-CCCHH
Q 024107 162 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSA-RSSSK 239 (272)
Q Consensus 162 ~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g-~~~~~ 239 (272)
.+.+.|....|. ...+++..+...+.+.+..++-....+ .+|+|+++|++++|..+++.. .+.. ..+.+
T Consensus 159 ~~al~f~~~~~~-------~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~~~--~~~~~~~~r~ 229 (244)
T 3q6o_A 159 YLALIFEXGGSY-------LAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVS--RVPVLMESRS 229 (244)
T ss_dssp EEEEEEECTTCC-------HHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEE--ECCCSSSSHH
T ss_pred eEEEEEEECCcc-------hHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCCeE--eeccccccHH
Confidence 777888877654 344555566654478888887665555 588999999999998776542 4443 45567
Q ss_pred HHHHHHHHHcC
Q 024107 240 NIAAFIKEQLK 250 (272)
Q Consensus 240 ~l~~~i~~~~~ 250 (272)
.+..++++..|
T Consensus 230 ~~~~~l~~~~~ 240 (244)
T 3q6o_A 230 FYTAYLQRLSG 240 (244)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHhCCC
Confidence 77777766554
No 20
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.82 E-value=1.2e-19 Score=131.87 Aligned_cols=112 Identities=37% Similarity=0.748 Sum_probs=97.7
Q ss_pred CCCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcC---CCceEEEEEeCCCCCCCCCcccCC
Q 024107 139 NTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKG---LDNLVIAKIDASANEHPKLQVEEY 215 (272)
Q Consensus 139 ~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~---~~~v~~~~id~~~~~~~~~~v~~~ 215 (272)
.....+..+++++|.+.+...+++++|+||++||++|+.+.|.|.++++.+.+ ..++.++.+|++.+++.+ ++.++
T Consensus 4 ~~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~~~ 82 (121)
T 2djj_A 4 GSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQGF 82 (121)
T ss_dssp CCSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCSSS
T ss_pred cCCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccCcC
Confidence 35567999999999998767789999999999999999999999999999975 226999999999998777 99999
Q ss_pred CeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 216 PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 216 P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
||+++|++|+.....++.|..+.+.|.+||+++++.
T Consensus 83 Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 83 PTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 999999888663233799999999999999998764
No 21
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.82 E-value=7.4e-19 Score=157.44 Aligned_cols=219 Identities=12% Similarity=0.104 Sum_probs=159.6
Q ss_pred CCceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC---ceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 13 FPLVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG---KIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~---~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
...|.+++.++|+..+ .++++++|.||++| ++|+++.|.|.++++.+.+ .+.|+.|||+...+ .++|++|||.+
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~-~~l~~~~~V~~ 89 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN-SAVCREFNIAG 89 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG-HHHHHHTTCCS
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc-HHHHHHcCCcc
Confidence 4468899999999855 66789999999999 9999999999999999987 79999999975222 79999999999
Q ss_pred CCceEEEEEeCCcc---eeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcC-CCcE
Q 024107 88 SKNTVVTAFDNKAI---SKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNS-HKDV 163 (272)
Q Consensus 88 ~~P~i~~~~~~~~~---~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~-~~~~ 163 (272)
+ ||+ .+++.++. ....+.|..+.+.|.+++.+.+.... ...|. ...++..++.+++.+++... ..++
T Consensus 90 ~-PTl-~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~------~~~P~-~~p~l~~it~~~l~~~l~~~~~~~v 160 (519)
T 3t58_A 90 F-PTV-RFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR------DTWPP-ACPPLEPAKLNDIDGFFTRNKADYL 160 (519)
T ss_dssp B-SEE-EEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC------SCCCT-TCCCCSBCCHHHHTTGGGSCCCSEE
T ss_pred c-CEE-EEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc------ccCCC-CCCccCcCCHHHHHHHhccCCCCeE
Confidence 9 999 88875321 22334677999999999999986422 11121 12234556677777776443 5577
Q ss_pred EEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEEeCCCCcCceEeeCC-CCHHHH
Q 024107 164 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSAR-SSSKNI 241 (272)
Q Consensus 164 lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~-~~~~~l 241 (272)
++.|+... .....+++..+...+.+.+..++.....+ .+|+|+.+|++++|..+++.. ++... .+..-+
T Consensus 161 allF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~--~~~v~~~~r~~~ 231 (519)
T 3t58_A 161 ALVFERED-------SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVS--RVPVLVESRSFY 231 (519)
T ss_dssp EEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEE--ECCCSSCSHHHH
T ss_pred EEEecCCc-------hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCcee--ecccccccHHHH
Confidence 78887654 22567777788765578888777654455 589999999999998877642 33333 233555
Q ss_pred HHHHHHHcC
Q 024107 242 AAFIKEQLK 250 (272)
Q Consensus 242 ~~~i~~~~~ 250 (272)
..++.+..+
T Consensus 232 ~~~l~~l~~ 240 (519)
T 3t58_A 232 TSYLRGLPG 240 (519)
T ss_dssp HHHHTTSTT
T ss_pred HHHHHHccC
Confidence 566655333
No 22
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.82 E-value=6.3e-20 Score=129.96 Aligned_cols=98 Identities=21% Similarity=0.494 Sum_probs=85.2
Q ss_pred EEecc-cchhHHhhcC-CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEE
Q 024107 145 QIVVG-KTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLF 220 (272)
Q Consensus 145 ~~l~~-~~~~~~v~~~-~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~ 220 (272)
..+++ ++|++.+.+. +++++|.|||+||++|+.+.|.+.++++.+. ++.|+.+|++.+ +++ +++|.++||+++
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~~l~~~~~V~~~PT~~~ 79 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECEDIAQDNQIACMPTFLF 79 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHHTTCCBSSEEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCHHHHHHcCCCeecEEEE
Confidence 34544 6799888654 6899999999999999999999999999886 589999999999 774 899999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
|++|+.+. ++.| .+.+.|.+||+++
T Consensus 80 ~~~G~~v~--~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 80 MKNGQKLD--SLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EETTEEEE--EEES-CCHHHHHHHHHHH
T ss_pred EECCEEEE--EEeC-cCHHHHHHHHHhc
Confidence 99998765 7888 4889999999875
No 23
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=3.1e-19 Score=131.89 Aligned_cols=114 Identities=42% Similarity=0.801 Sum_probs=99.5
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCe
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPT 217 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~ 217 (272)
....+..++.++|.+.+...+++++|+||++||++|+.+.|.|.+++..+.+.+++.++.+|++.+ .+. +++|.++|+
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 455799999999999886678999999999999999999999999999998533799999999998 554 799999999
Q ss_pred EEEEeCCCCcCceEee-CCCCHHHHHHHHHHHcCcCC
Q 024107 218 LLFYPAGDKANPIKVS-ARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 218 l~~~~~~~~~~~~~~~-g~~~~~~l~~~i~~~~~~~~ 253 (272)
+++|++|+....++|. |..+.+.|.+||++.++...
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 9999988877666788 45899999999999987653
No 24
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.81 E-value=1.7e-19 Score=128.87 Aligned_cols=105 Identities=15% Similarity=0.387 Sum_probs=95.5
Q ss_pred CCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEE
Q 024107 142 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 219 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~ 219 (272)
..+..++.++|.+.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++ .++++.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 45888999999999877889999999999999999999999999999987 799999999999 56 489999999999
Q ss_pred EEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 220 FYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+|++|+... ++.|..+.+.|.+||++.++
T Consensus 82 ~~~~g~~~~--~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 82 YFKDGEYKG--KMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEETTEEEE--EEESSCCHHHHHHHHHHHHH
T ss_pred EEECCEEEE--EEeccCCHHHHHHHHHHHhc
Confidence 999887653 79999999999999998864
No 25
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.80 E-value=1.8e-18 Score=139.67 Aligned_cols=204 Identities=16% Similarity=0.161 Sum_probs=160.6
Q ss_pred ceEeeCcccccccccCCcceEEEEEEcccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEE
Q 024107 15 LVTKLTDINSASVHSSPIKLQVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVT 94 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~~~~~~~v~fy~~~~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~ 94 (272)
.+...+.++++++++....++|.||++| |....+.|.++|..+. .+.|+... . .++|+++++++ |+| .
T Consensus 11 ~~~l~s~~~~~~~l~~~~v~vVgff~~~--~~~~~~~f~~~A~~l~-~~~F~~t~---~---~~v~~~~~v~~--p~i-~ 78 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAATEVAVIGFFQDL--EIPAVPILHSMVQKFP-GVSFGIST---D---SEVLTHYNITG--NTI-C 78 (227)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCS--CSTHHHHHHHHTTTCT-TSEEEEEC---C---HHHHHHTTCCS--SEE-E
T ss_pred CeeeCCHHHHHHHHhcCCeEEEEEecCC--CchhHHHHHHHHHhCC-CceEEEEC---C---HHHHHHcCCCC--CeE-E
Confidence 3444466889998888889999999987 6778899999999995 69998743 4 68999999975 999 7
Q ss_pred EEeCCcceeecCC----CCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCCcEEEEEECC
Q 024107 95 AFDNKAISKFLLE----SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTP 170 (272)
Q Consensus 95 ~~~~~~~~~~~~~----g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~ 170 (272)
+|.........|. |.++.+.|.+|+....- ..+..++.+++.+.........+++|+.+
T Consensus 79 lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~-----------------plv~e~t~~n~~~~~~~~~~~~~l~f~~~ 141 (227)
T 4f9z_D 79 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL-----------------HMVTEYNPVTVIGLFNSVIQIHLLLIMNK 141 (227)
T ss_dssp EEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCC-----------------CSEEECCHHHHHHHHHSSCCEEEEEEECT
T ss_pred EEEecCcccccccccccCCCCHHHHHHHHHHhCC-----------------CceeecCcccHHHHhccCCceEEEEEEcC
Confidence 8876443344456 47999999999999632 24889999999987644445556778899
Q ss_pred CChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC--C-CC-CCCccc--CCCeEEEEeCCCCcCceEe-eCCCCHHHHHH
Q 024107 171 WCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA--N-EH-PKLQVE--EYPTLLFYPAGDKANPIKV-SARSSSKNIAA 243 (272)
Q Consensus 171 ~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~--~-~~-~~~~v~--~~P~l~~~~~~~~~~~~~~-~g~~~~~~l~~ 243 (272)
||..|..+.+.|+++|+.+++ ++.|+.+|++. + .. ..+++. .+|++.++..+... ...+ .+..+.+.|.+
T Consensus 142 ~~~~~~~~~~~~~~vAk~~k~--~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~-ky~~~~~~~t~~~i~~ 218 (227)
T 4f9z_D 142 ASPEYEENMHRYQKAAKLFQG--KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDE-WDTLPTAEVSVEHVQN 218 (227)
T ss_dssp TSTTHHHHHHHHHHHHHHTTT--TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCC-EEEETTCCCCHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHhhC--CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCc-cccCCcCCCCHHHHHH
Confidence 999999999999999999998 79999999975 3 22 467777 89999999865432 1223 36789999999
Q ss_pred HHHHHcC
Q 024107 244 FIKEQLK 250 (272)
Q Consensus 244 ~i~~~~~ 250 (272)
|+++.+.
T Consensus 219 Fv~~~~~ 225 (227)
T 4f9z_D 219 FCDGFLS 225 (227)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 9998764
No 26
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.80 E-value=6.4e-19 Score=125.26 Aligned_cols=104 Identities=23% Similarity=0.538 Sum_probs=93.6
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLF 220 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~ 220 (272)
.+..++.++|.+.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++. ++++.++|++++
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHHTTCCSSSEEEE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCcccCEEEE
Confidence 5788999999988877889999999999999999999999999999987 799999999998 564 899999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
|++|+... ++.|..+.+.|.+||++.++
T Consensus 81 ~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 81 FKNGEVAA--TKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHHHHC
T ss_pred EeCCEEEE--EEecCCCHHHHHHHHHHhhC
Confidence 98887653 78999999999999998764
No 27
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.79 E-value=9.6e-18 Score=144.01 Aligned_cols=221 Identities=12% Similarity=0.110 Sum_probs=173.7
Q ss_pred hhHHHHHhhcCCCceEeeC-ccccccccc-CCcceEEEEEEcccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhH
Q 024107 2 DKILQFLNYNKFPLVTKLT-DINSASVHS-SPIKLQVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPF 79 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~-~~~f~~~~~-~~~~~~v~fy~~~~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l 79 (272)
++|.+||.....|.+.+++ .++++++++ ....++|.||.++ |....+.|.++|..+++.+.|+.++ . .++
T Consensus 111 ~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~--~~~~~~~~~~~A~~~~~~~~f~~~~---~---~~~ 182 (350)
T 1sji_A 111 DVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSE--ESEYYKAFEEAAEHFQPYIKFFATF---D---KGV 182 (350)
T ss_dssp HHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCT--TSHHHHHHHHHHHHTTTTSEEEEEC---C---HHH
T ss_pred HHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCC--CcHHHHHHHHHHHhhccCcEEEEEC---C---HHH
Confidence 4689999999999999995 577888776 6667899999886 4455689999999998889999873 3 579
Q ss_pred HhhcCCCCCCceEEEEEeCCcceeecCCCC-CChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhc
Q 024107 80 LTLFGLEESKNTVVTAFDNKAISKFLLESD-LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLN 158 (272)
Q Consensus 80 ~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~-~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~ 158 (272)
|+++|++ + |++ .+|...+.....|.|. ++.++|.+|+.+... ..+..++.+++.++...
T Consensus 183 ~~~~~v~-~-p~i-~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-----------------p~v~elt~~~~~~~~~~ 242 (350)
T 1sji_A 183 AKKLSLK-M-NEV-DFYEPFMDEPIAIPDKPYTEEELVEFVKEHQR-----------------PTLRRLRPEDMFETWED 242 (350)
T ss_dssp HHHHTCC-T-TCE-EEECTTCSSCEECSSSSCCHHHHHHHHHHHCC-----------------CSEEECCTTTHHHHHHS
T ss_pred HHHcCCC-C-CcE-EEEeCCCCCceecCCCCCCHHHHHHHHHHcCc-----------------cchhhcChhhHHHHhcC
Confidence 9999999 8 999 7887644444556887 999999999998642 24888999999987543
Q ss_pred CC-CcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-----CCccc-CCCeEEEEeCCCCcCce
Q 024107 159 SH-KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-----KLQVE-EYPTLLFYPAGDKANPI 230 (272)
Q Consensus 159 ~~-~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-----~~~v~-~~P~l~~~~~~~~~~~~ 230 (272)
.. +..++.|+.++|..|..+.+.++++|+++++..++.|+.+|++.+ ... .+++. .+|+++++...+.. ..
T Consensus 243 ~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~-~~ 321 (350)
T 1sji_A 243 DLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDAD-SV 321 (350)
T ss_dssp CSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEESSSSC-EE
T ss_pred CCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEeccccc-cc
Confidence 32 445666999999999999999999999998533699999999977 322 46776 58999999763321 11
Q ss_pred E--e---eCCCCHHHHHHHHHHHcCc
Q 024107 231 K--V---SARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 231 ~--~---~g~~~~~~l~~~i~~~~~~ 251 (272)
. + .|..+.+.|.+|+++.+.-
T Consensus 322 ~~~~~~~~~~~~~~~i~~F~~d~~~G 347 (350)
T 1sji_A 322 WMEIPDDDDLPTAEELEDWIEDVLSG 347 (350)
T ss_dssp ESCSSCCSCCCCHHHHHHHHHHHHTS
T ss_pred ccCCCcccccCCHHHHHHHHHHHhcC
Confidence 2 2 2478999999999998754
No 28
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.79 E-value=1.3e-19 Score=132.57 Aligned_cols=104 Identities=21% Similarity=0.194 Sum_probs=95.1
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCC--hhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWC--VTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTL 218 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C--~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l 218 (272)
....++.++|++.+...+++++|+||++|| ++|+.+.|.+.+++.++.+ +++|+.+|.+.+ ++. +|+|.++||+
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAERGLMARFGVAVCPSL 93 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHHHHHHHHTCCSSSEE
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCccCCEE
Confidence 356889999999997666699999999999 9999999999999999987 899999999999 775 8999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++|++|+.+. +..|..+.+.|.++|++++.
T Consensus 94 ilFkdG~~v~--~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 94 AVVQPERTLG--VIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEEECCEEEE--EEESCCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEE--EEeCCCCHHHHHHHHHHHhc
Confidence 9999999876 89999999999999998873
No 29
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.79 E-value=4.4e-19 Score=142.75 Aligned_cols=113 Identities=21% Similarity=0.488 Sum_probs=100.7
Q ss_pred CCCCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCC
Q 024107 138 DNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEY 215 (272)
Q Consensus 138 ~~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~ 215 (272)
....+.+..++.++|++.+..++++++|+||++||++|+.+.|.|.++++.+++ ++.++.+|++.+ ++. +++|.++
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~ 85 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGI 85 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGGGTCCSB
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHHcCCCcC
Confidence 335667999999999998878899999999999999999999999999999987 799999999999 664 8999999
Q ss_pred CeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCC
Q 024107 216 PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 216 P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
|++++|++|+... ++.|..+.+.|.+||++.+.....
T Consensus 86 Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~~~~~ 122 (222)
T 3dxb_A 86 PTLLLFKNGEVAA--TKVGALSKGQLKEFLDANLAGSAM 122 (222)
T ss_dssp SEEEEEETTEEEE--EEESCCCHHHHHHHHHHHSCCSCC
T ss_pred CEEEEEECCeEEE--EeccccChHHHHHHHHhhcccccc
Confidence 9999999887654 799999999999999999876543
No 30
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.79 E-value=1.7e-18 Score=127.25 Aligned_cols=104 Identities=22% Similarity=0.502 Sum_probs=93.7
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLF 220 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~ 220 (272)
.+..++.++|.+.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++. ++++.++|++++
T Consensus 23 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 100 (128)
T 2o8v_B 23 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLLL 100 (128)
T ss_dssp CSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGGGTCCSSSEEEE
T ss_pred ccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 4888999999988877889999999999999999999999999999987 799999999998 664 889999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
|++|+... ++.|..+.+.|.+||++.++
T Consensus 101 ~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 101 FKNGEVAA--TKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHHHHC
T ss_pred EeCCEEEE--EEcCCCCHHHHHHHHHHhhC
Confidence 98877543 78999999999999998764
No 31
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.79 E-value=1.2e-18 Score=129.58 Aligned_cols=105 Identities=12% Similarity=0.182 Sum_probs=90.0
Q ss_pred eEEecc-cchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEE
Q 024107 144 VQIVVG-KTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLL 219 (272)
Q Consensus 144 v~~l~~-~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~ 219 (272)
+..++. .+|++.+.+ .+++++|.|||+||++|+.+.|.+.++|.++.+ ++.|+.+|++++ +++ +|+|.+.||++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPDFNTMYELYDPVSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTTTTCCSSEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 555655 789988874 788999999999999999999999999999987 799999999999 775 89999999999
Q ss_pred EEeCCCCcCce-------EeeCCCC-HHHHHHHHHHHcC
Q 024107 220 FYPAGDKANPI-------KVSARSS-SKNIAAFIKEQLK 250 (272)
Q Consensus 220 ~~~~~~~~~~~-------~~~g~~~-~~~l~~~i~~~~~ 250 (272)
+|++|+.+..- +..|..+ .+.|.++|+..+.
T Consensus 101 fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 101 FFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp EEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 99999864101 4778776 8999999998763
No 32
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.78 E-value=8.1e-19 Score=127.20 Aligned_cols=110 Identities=25% Similarity=0.499 Sum_probs=96.5
Q ss_pred CCCCCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccC
Q 024107 137 PDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEE 214 (272)
Q Consensus 137 ~~~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~ 214 (272)
|......+..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+ ++. ++++.+
T Consensus 8 ~~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~ 85 (119)
T 1w4v_A 8 HHHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAIEYEVSA 85 (119)
T ss_dssp --CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHHHTTCCS
T ss_pred ccCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCc
Confidence 3335667889999999998888889999999999999999999999999999987 799999999998 664 899999
Q ss_pred CCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 215 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 215 ~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+|++++|++|+... ++.|..+.+.|.+||++.++
T Consensus 86 ~Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 86 VPTVLAMKNGDVVD--KFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp SSEEEEEETTEEEE--EEESCCCHHHHHHHHHHHHC
T ss_pred ccEEEEEeCCcEEE--EEcCCCCHHHHHHHHHHHhC
Confidence 99999998887553 78999999999999998764
No 33
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.78 E-value=1.4e-18 Score=124.51 Aligned_cols=105 Identities=24% Similarity=0.427 Sum_probs=94.4
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEEE
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLFY 221 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~ 221 (272)
+..++.++|.+.+ .+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++. ++++.++|++++|
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 6788999999988 788999999999999999999999999999987 799999999998 664 8999999999999
Q ss_pred eCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCC
Q 024107 222 PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
++|+... ++.|..+.+.|.+|+.++++....
T Consensus 79 ~~G~~~~--~~~G~~~~~~l~~~l~~~~~~~~~ 109 (112)
T 2voc_A 79 KDGEVVE--TSVGFKPKEALQELVNKHLLEHHH 109 (112)
T ss_dssp ETTEEEE--EEESCCCHHHHHHHHHTTSCSCCC
T ss_pred eCCEEEE--EEeCCCCHHHHHHHHHHHHHhhcc
Confidence 8887553 799999999999999999876654
No 34
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.78 E-value=2.4e-18 Score=121.93 Aligned_cols=102 Identities=25% Similarity=0.498 Sum_probs=92.1
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 220 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~ 220 (272)
.+..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+ ++ .++++.++|++++
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPNAYQVRSIPTLML 80 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHHHTTCCSSSEEEE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHHhcCCCccCEEEE
Confidence 5788999999988877789999999999999999999999999999987 799999999998 55 4899999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
|++|+... ++.|..+.+.|.+||++.
T Consensus 81 ~~~G~~~~--~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 81 VRDGKVID--KKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHHT
T ss_pred EeCCEEEE--EecCCCCHHHHHHHHHhc
Confidence 98887653 789999999999999875
No 35
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.77 E-value=2.3e-18 Score=123.24 Aligned_cols=104 Identities=23% Similarity=0.481 Sum_probs=93.9
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 220 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~ 220 (272)
.+..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .++++.++|++++
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 83 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAAKYGVMSIPTLNV 83 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHHhCCCCcccEEEE
Confidence 5788999999998877889999999999999999999999999999987 799999999998 56 4899999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
|++|+... ++.|..+.+.|.+||++.+.
T Consensus 84 ~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 84 YQGGEVAK--TIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHTHHHHC
T ss_pred EeCCEEEE--EEeCCCCHHHHHHHHHHHhh
Confidence 98887653 78999999999999998764
No 36
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.77 E-value=4e-18 Score=130.84 Aligned_cols=111 Identities=14% Similarity=0.217 Sum_probs=94.9
Q ss_pred CCeEEecccchhHHhhcC-CCcEEEEEEC-------CCChhHHHhHHHHHHHHHHhc-----CCCceEEEEEeCCCC-CC
Q 024107 142 ANVQIVVGKTFDDLVLNS-HKDVLLEVYT-------PWCVTCETTSKQIEKLAKHFK-----GLDNLVIAKIDASAN-EH 207 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~-~~~~lv~f~~-------~~C~~c~~~~~~~~~~a~~~~-----~~~~v~~~~id~~~~-~~ 207 (272)
..+..+++.+|++++..+ +.+++|+||| +||++|+.+.|.|+++|+.+. + ++.|+.+|++.+ ++
T Consensus 18 ~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~--~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 18 TGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS--LNLFFTVDVNEVPQL 95 (178)
T ss_dssp TSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC--CEEEEEEETTTCHHH
T ss_pred CCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC--CEEEEEEECccCHHH
Confidence 468899999999987543 5579999999 499999999999999999997 5 899999999999 77
Q ss_pred -CCCcccCCCeEEEEeCCCCcC----------ceEe---eC-CCCHHHHHHHHHHHcCcCCC
Q 024107 208 -PKLQVEEYPTLLFYPAGDKAN----------PIKV---SA-RSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 208 -~~~~v~~~P~l~~~~~~~~~~----------~~~~---~g-~~~~~~l~~~i~~~~~~~~~ 254 (272)
.+|+|.++||+++|++|.... ...| .| ..+.+.|.+||.+.++....
T Consensus 96 a~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~ 157 (178)
T 3ga4_A 96 VKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISIT 157 (178)
T ss_dssp HHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCC
T ss_pred HHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCcc
Confidence 499999999999999987542 2445 35 78999999999999986654
No 37
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.4e-18 Score=127.76 Aligned_cols=109 Identities=20% Similarity=0.398 Sum_probs=97.4
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCe
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPT 217 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~ 217 (272)
....+..++.++|++.+...+++++|+||++||++|+.+.|.+.++++.+.+ .+.++.+|++.+ ++. +++|.++|+
T Consensus 15 ~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (130)
T 2dml_A 15 SSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGGQYGVQGFPT 92 (130)
T ss_dssp TTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHHHcCCCccCE
Confidence 4557899999999998877889999999999999999999999999999987 699999999998 664 889999999
Q ss_pred EEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 218 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 218 l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
+++|++|+.. ..++.|..+.+.|.+||.+.+..
T Consensus 93 ~~~~~~~~~~-~~~~~G~~~~~~l~~~l~~~l~~ 125 (130)
T 2dml_A 93 IKIFGANKNK-PEDYQGGRTGEAIVDAALSALRS 125 (130)
T ss_dssp EEEESSCTTS-CEECCSCCSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCe-EEEeecCCCHHHHHHHHHHHHhc
Confidence 9999888763 44799999999999999998754
No 38
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=2.1e-18 Score=128.49 Aligned_cols=117 Identities=29% Similarity=0.533 Sum_probs=100.0
Q ss_pred CCCCCCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCC-ceEEEEEeCCCC-CC-CCCcc
Q 024107 136 IPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD-NLVIAKIDASAN-EH-PKLQV 212 (272)
Q Consensus 136 ~~~~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~-~v~~~~id~~~~-~~-~~~~v 212 (272)
.+......+..++.++|++.+ ..+++++|+||++||++|+.+.|.|.++++.+.+.. ++.++.+|++.+ ++ .+++|
T Consensus 11 ~~~~~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v 89 (140)
T 2dj1_A 11 LEVKEENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDV 89 (140)
T ss_dssp SCCEEETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTC
T ss_pred cccCCCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCC
Confidence 333355679999999999976 557899999999999999999999999999998632 499999999998 66 48999
Q ss_pred cCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCCCC
Q 024107 213 EEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQSP 256 (272)
Q Consensus 213 ~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~ 256 (272)
.++|++++|++|+ . .++.|..+.+.|.+||++.++......
T Consensus 90 ~~~Pt~~~~~~G~-~--~~~~g~~~~~~l~~~l~~~~~~~~~~~ 130 (140)
T 2dj1_A 90 SGYPTIKILKKGQ-A--VDYDGSRTQEEIVAKVREVSQPDWTPP 130 (140)
T ss_dssp CSSSEEEEEETTE-E--EECCSCCCHHHHHHHHHHHHSSSCCCC
T ss_pred CccCeEEEEECCc-E--EEcCCCCCHHHHHHHHHHhcCCCCCCC
Confidence 9999999998876 3 379999999999999999998765543
No 39
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.7e-18 Score=127.80 Aligned_cols=109 Identities=21% Similarity=0.485 Sum_probs=96.7
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhc----CCCceEEEEEeCCCC-CCC-CCccc
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFK----GLDNLVIAKIDASAN-EHP-KLQVE 213 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~----~~~~v~~~~id~~~~-~~~-~~~v~ 213 (272)
....+..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+. + ++.++.+|++.+ ++. +++|.
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~ 82 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG--KVKLAAVDATVNQVLASRYGIR 82 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT--SEEEEEEETTTCCHHHHHHTCC
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC--cEEEEEEECCCCHHHHHhCCCC
Confidence 345688999999999887778999999999999999999999999999997 5 799999999998 554 88999
Q ss_pred CCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 214 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 214 ~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
++|++++|++|+.. .++.|..+.+.|.+||.+.+...
T Consensus 83 ~~Pt~~~~~~g~~~--~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 83 GFPTIKIFQKGESP--VDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp SSSEEEEEETTEEE--EEECSCCSHHHHHHHHHHHHHHH
T ss_pred eeCeEEEEeCCCce--EEecCCCCHHHHHHHHHHHhhcc
Confidence 99999999997643 37999999999999999988654
No 40
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.77 E-value=1.4e-19 Score=132.97 Aligned_cols=106 Identities=11% Similarity=0.168 Sum_probs=94.6
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCC--ChhHHHhHHHHHHHHHHhcCCCc-eEEEEEeCCCC-CCC-CCcccCCCeE
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPW--CVTCETTSKQIEKLAKHFKGLDN-LVIAKIDASAN-EHP-KLQVEEYPTL 218 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~--C~~c~~~~~~~~~~a~~~~~~~~-v~~~~id~~~~-~~~-~~~v~~~P~l 218 (272)
+..++.++|++.+. ++++++|+||++| |++|+.+.|.+.+++.++.+ + ++|+.+|.+.+ +++ +|+|.++||+
T Consensus 19 ~~~~t~~~F~~~v~-~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 19 WTPVSESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSEAIGDRFGAFRFPAT 95 (140)
T ss_dssp CEECCHHHHHHHHH-TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHHHHHHHHTCCSSSEE
T ss_pred CccCCHHHHHHHHh-CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCHHHHHHcCCccCCEE
Confidence 56789999999984 7789999999999 99999999999999999988 7 99999999999 775 9999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCC
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
++|++|+.+. +..|..+.+.|.+||++.+.....
T Consensus 96 ilFk~G~~v~--~~~G~~~k~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 96 LVFTGGNYRG--VLNGIHPWAELINLMRGLVEPQQE 129 (140)
T ss_dssp EEEETTEEEE--EEESCCCHHHHHHHHHHHHC----
T ss_pred EEEECCEEEE--EEecCCCHHHHHHHHHHHhcCCCC
Confidence 9999999876 899999999999999999865543
No 41
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.77 E-value=1.4e-18 Score=129.65 Aligned_cols=107 Identities=21% Similarity=0.349 Sum_probs=96.8
Q ss_pred CCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeE
Q 024107 141 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTL 218 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l 218 (272)
...+..++.++|.+.+...+++++|+||++||++|+.+.|.|.++++.+.+ ++.|+.+|++.+ ++. +++|.++|++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 346899999999987778899999999999999999999999999999987 799999999999 664 8899999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
++|++|+.+. ++.|..+.+.|.+||++.+..
T Consensus 83 ~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 83 KFFCHGRPVW--EQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEEETTEEEE--EEESSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCcEEE--EEcCCCCHHHHHHHHHHHhcc
Confidence 9999887653 799999999999999998864
No 42
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.77 E-value=2.5e-18 Score=121.64 Aligned_cols=101 Identities=26% Similarity=0.464 Sum_probs=91.7
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 220 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~ 220 (272)
.+..++.++|.+.+ .+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++ .++++.++|++++
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAKYEVMSIPTLIV 79 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHhCCCcccCEEEE
Confidence 57889999999988 789999999999999999999999999999987 799999999999 56 4899999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
|++|+... ++.|..+.+.|.+||++.+
T Consensus 80 ~~~G~~~~--~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 80 FKDGQPVD--KVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHTTC
T ss_pred EeCCeEEE--EEeCCCCHHHHHHHHHHhC
Confidence 99887654 7999999999999998753
No 43
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.77 E-value=3.7e-18 Score=122.55 Aligned_cols=106 Identities=22% Similarity=0.423 Sum_probs=94.7
Q ss_pred CCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEE
Q 024107 142 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 219 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~ 219 (272)
..+..++.++|.+.+...+++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .++++.++|+++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~ 84 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVKKYKVEGVPALR 84 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHHHTTCCSSSEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHHHcCCCceeEEE
Confidence 35889999999998877889999999999999999999999999999987 799999999998 56 489999999999
Q ss_pred EEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 220 FYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
+|++|+... ++.|..+.+.|.+||++.++.
T Consensus 85 ~~~~G~~~~--~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 85 LVKGEQILD--STEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEETTEEEE--EEESCCCHHHHHHHHHHHHC-
T ss_pred EEcCCEEEE--EecCCCCHHHHHHHHHHHhcC
Confidence 998887553 789999999999999998763
No 44
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.76 E-value=2.9e-18 Score=130.19 Aligned_cols=107 Identities=17% Similarity=0.446 Sum_probs=94.8
Q ss_pred CCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeE
Q 024107 141 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 218 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l 218 (272)
.+.+..++..+|.+.+ ..+++++|+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+ ++ .+++|.++|++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 3457888999999988 7789999999999999999999999999999987 799999999998 55 48999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
++|++|+... ++.|..+.+.|.+||++.++.+
T Consensus 123 ~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 123 ILFHKGRELA--RAAGARPASELVGFVRGKLGAR 154 (155)
T ss_dssp EEEETTEEEE--EEESCCCHHHHHHHHHHHHC--
T ss_pred EEEeCCeEEE--EecCCCCHHHHHHHHHHHhccC
Confidence 9998887654 7899999999999999988753
No 45
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.76 E-value=2.9e-18 Score=121.60 Aligned_cols=102 Identities=22% Similarity=0.511 Sum_probs=92.0
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEEE
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLFY 221 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~ 221 (272)
+..++.++|.+.+..++++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++. ++++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 678899999998877889999999999999999999999999999987 799999999998 664 7899999999999
Q ss_pred eCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 222 PAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
++|+... ++.|..+.+.|.++|++.+
T Consensus 81 ~~G~~~~--~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 81 KGGKKCE--TIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSSEEE--EEESCCCHHHHHHHHHHHC
T ss_pred eCCEEEE--EEeCCCCHHHHHHHHHHHh
Confidence 8877653 7899999999999999875
No 46
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.76 E-value=2.4e-18 Score=125.11 Aligned_cols=107 Identities=25% Similarity=0.492 Sum_probs=94.4
Q ss_pred CCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEE
Q 024107 142 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 219 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~ 219 (272)
+.+..++.++|.+.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++ .++++.++|+++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 35788999999887777889999999999999999999999999999987 799999999998 56 489999999999
Q ss_pred EEeCCCCcCceEeeCC----CCHHHHHHHHHHHcCcC
Q 024107 220 FYPAGDKANPIKVSAR----SSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~~~~ 252 (272)
+|++|+... ++.|. .+.+.|.+||.+.++..
T Consensus 81 ~~~~~~~~~--~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 81 LYQYERAKK--SIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp EEEEEGGGT--EEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred EEeCCCccc--eeeccccCcCCHHHHHHHHHHHHHhh
Confidence 998777654 67775 89999999999988644
No 47
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.76 E-value=5.1e-18 Score=120.56 Aligned_cols=103 Identities=20% Similarity=0.486 Sum_probs=92.8
Q ss_pred CCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEE
Q 024107 142 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 219 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~ 219 (272)
..+..++.++|++.+ ..+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++ .++++.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 4 DVTLVLTEENFDEVI-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CCCEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeEEEecHHHHHHHH-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHHhcCcccCCEEE
Confidence 357889999999987 4589999999999999999999999999999987 799999999999 66 489999999999
Q ss_pred EEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 220 FYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+|++|+... ++.|..+.+.|.++|++.+
T Consensus 81 ~~~~g~~~~--~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVD--SLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEE--EEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEE--eeeccCCHHHHHHHHHHHh
Confidence 998887654 7999999999999999875
No 48
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.76 E-value=4.9e-18 Score=119.90 Aligned_cols=102 Identities=24% Similarity=0.568 Sum_probs=91.4
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEE
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 221 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~ 221 (272)
+..++.++|.+.+..++++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+ ++ .++++.++|++++|
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 567899999998877789999999999999999999999999999987 799999999998 56 48999999999999
Q ss_pred eCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 222 PAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
++|+... ++.|..+.+.|.++|++.+
T Consensus 80 ~~g~~~~--~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 80 KNGERKE--SIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp ETTEEEE--EEEECCCHHHHHHHHHHHC
T ss_pred eCCeEEE--EEecCCCHHHHHHHHHhhC
Confidence 8887653 7899999999999998764
No 49
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.76 E-value=2.4e-18 Score=124.81 Aligned_cols=107 Identities=23% Similarity=0.475 Sum_probs=94.4
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCe
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 217 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~ 217 (272)
....+..++..+|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+ ++ .++++.++|+
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt 87 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETARNFQVVSIPT 87 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhcCCCcCCE
Confidence 4556889999999998877889999999999999999999999999999987 799999999998 56 4899999999
Q ss_pred EEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 218 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 218 l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+++|++|+... ++.|..+.+.|.+||++.+.
T Consensus 88 ~~~~~~g~~~~--~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 88 LILFKDGQPVK--RIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEETTEEEE--EEESCCCHHHHHHHTCSCCC
T ss_pred EEEEECCEEEE--EecCCCCHHHHHHHHHHHHh
Confidence 99999887543 79999999999999987764
No 50
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.76 E-value=4.6e-18 Score=121.29 Aligned_cols=103 Identities=28% Similarity=0.511 Sum_probs=91.7
Q ss_pred CCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCC-CceEEEEEeCCCC-CC-CCCcccCCCeE
Q 024107 142 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDASAN-EH-PKLQVEEYPTL 218 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~-~~v~~~~id~~~~-~~-~~~~v~~~P~l 218 (272)
+.+..++.++|++.+. +++++|+||++||++|+.+.|.+.++++.+... .++.++.+|++.+ ++ .++++.++|++
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 5 STVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 3688999999999885 779999999999999999999999999988643 2799999999998 66 48999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
++|++|+... ++.|..+.+.|.+||+++
T Consensus 83 ~~~~~g~~~~--~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGKKVS--EHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETTEEEE--EECSCCSHHHHHHHHHHH
T ss_pred EEEeCCcEEE--eccCCcCHHHHHHHHHhc
Confidence 9999887654 799999999999999875
No 51
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.76 E-value=5.3e-18 Score=127.67 Aligned_cols=107 Identities=18% Similarity=0.466 Sum_probs=96.8
Q ss_pred CCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeE
Q 024107 141 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 218 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l 218 (272)
...+..++.++|.+.+ ..+++++|+||++||++|+.+.|.|.++++.+.+ ++.++.+|++.+ ++ .+|+|.++|++
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 4568899999999988 7789999999999999999999999999999987 799999999999 66 48999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
++|++|+.+. ++.|..+.+.|.+||++.++..
T Consensus 114 ~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~~~ 145 (148)
T 3p2a_A 114 MLYRNGKMID--MLNGAVPKAPFDNWLDEQLSRD 145 (148)
T ss_dssp EEEETTEEEE--EESSCCCHHHHHHHHHHHHHSC
T ss_pred EEEECCeEEE--EEeCCCCHHHHHHHHHHHhccc
Confidence 9999887654 7999999999999999988643
No 52
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=124.92 Aligned_cols=130 Identities=31% Similarity=0.592 Sum_probs=106.1
Q ss_pred HhhcCCCceEeeCcccccccccCCcceEEEEEEcc--cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCC
Q 024107 8 LNYNKFPLVTKLTDINSASVHSSPIKLQVYVFAKA--DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGL 85 (272)
Q Consensus 8 i~~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~--~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i 85 (272)
...++.|+|.++|.++..++++++.+..+++|... ...+.+.+.++++|+++++++.|+.+|.+...+ ..+++.||+
T Consensus 8 ~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~-~~~l~~fGl 86 (147)
T 3bj5_A 8 MKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDN-QRILEFFGL 86 (147)
T ss_dssp -------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGG-HHHHHHTTC
T ss_pred hhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhH-HHHHHHcCC
Confidence 45689999999999999999999988877766653 567889999999999999999999999943322 579999999
Q ss_pred CCCC-ceEEEEEeC-CcceeecCC-CCCChHHHHHHHHHHhcCccccccccCCCCCC
Q 024107 86 EESK-NTVVTAFDN-KAISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDN 139 (272)
Q Consensus 86 ~~~~-P~i~~~~~~-~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~ 139 (272)
+... |++ ++++. +.+.+|.+. ++.+.++|.+|+.+++.|+++++++|+|+|++
T Consensus 87 ~~~~~P~v-~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~ 142 (147)
T 3bj5_A 87 KKEECPAV-RLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 142 (147)
T ss_dssp CGGGCSEE-EEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGG
T ss_pred CcccCCEE-EEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCC
Confidence 9622 999 88875 556788875 78999999999999999999999999999985
No 53
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.75 E-value=4.7e-18 Score=126.81 Aligned_cols=107 Identities=19% Similarity=0.432 Sum_probs=93.7
Q ss_pred CCCCeEEecccchhHHhhc-----------CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC
Q 024107 140 TNANVQIVVGKTFDDLVLN-----------SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH 207 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~-----------~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~ 207 (272)
....+..++..+|.+.+.+ .+++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPEL 97 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHHH
Confidence 4557899999999998866 478999999999999999999999999999987 799999999999 66
Q ss_pred -CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 208 -PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 208 -~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
.+|+|.++|++++|+.++.. +++.|..+.+.|.+||++.+.
T Consensus 98 ~~~~~v~~~Pt~~~~~~~g~~--~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPMKGEP--QVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHTTCCSSSEEEEECSSSCC--EEEESCCCHHHHHHHHHHTTC
T ss_pred HHHcCCCCcCEEEEEeCCCCE--EEEeCCCCHHHHHHHHHHHHc
Confidence 48999999999999666554 389999999999999998875
No 54
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.75 E-value=5.8e-17 Score=139.92 Aligned_cols=225 Identities=10% Similarity=0.082 Sum_probs=177.3
Q ss_pred hhHHHHHhhcCCCceEeeC-ccccccccc-CCcceEEEEEEcccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhH
Q 024107 2 DKILQFLNYNKFPLVTKLT-DINSASVHS-SPIKLQVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPF 79 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~-~~~f~~~~~-~~~~~~v~fy~~~~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l 79 (272)
++|.+||.....|.+..++ .+++++++. ....++|.||.++ |....+.|.++|..+++.+.|+.++ . ..+
T Consensus 113 ~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~--~~~~~~~f~~~A~~~~~~~~F~~~~---~---~~~ 184 (367)
T 3us3_A 113 DTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNK--DSEHYKAFKEAAEEFHPYIPFFATF---D---SKV 184 (367)
T ss_dssp HHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCT--TCHHHHHHHHHHHHHTTTSCEEEEC---C---HHH
T ss_pred HHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCC--CchHHHHHHHHHHhhcCCcEEEEEC---C---HHH
Confidence 5689999999999999995 578888887 5678899999887 4456788999999999889999874 3 479
Q ss_pred HhhcCCCCCCceEEEEEeCCcceeecCCCC-CChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhc
Q 024107 80 LTLFGLEESKNTVVTAFDNKAISKFLLESD-LTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLN 158 (272)
Q Consensus 80 ~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~-~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~ 158 (272)
++++|++ . |+| .+|.........|.|+ ++.+.|.+|+....- ..+..++.+++.+....
T Consensus 185 ~~~~~v~-~-p~i-~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-----------------p~v~elt~~~~~~~~~~ 244 (367)
T 3us3_A 185 AKKLTLK-L-NEI-DFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRR-----------------STLRKLKPESMYETWED 244 (367)
T ss_dssp HHHHTCC-T-TCE-EEECTTCSSCEECSSSSCCHHHHHHHHHHTCS-----------------CSEEECCGGGHHHHHHS
T ss_pred HHHcCCC-C-CeE-EEEcCCCCCCeecCCCCCCHHHHHHHHHHcCc-----------------cceeecChhhHHHHHhh
Confidence 9999998 4 999 7887754455566885 999999999999532 25888999998877654
Q ss_pred C-CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCCC------CCccc-CCCeEEEEeCCCCc-Cc
Q 024107 159 S-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHP------KLQVE-EYPTLLFYPAGDKA-NP 229 (272)
Q Consensus 159 ~-~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~~------~~~v~-~~P~l~~~~~~~~~-~~ 229 (272)
. .++.++.|+.++|..|..+...++++|+.+++.+++.|+.+|++..... .+++. .+|.++++...... ..
T Consensus 245 ~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~ 324 (367)
T 3us3_A 245 DMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVW 324 (367)
T ss_dssp CBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEE
T ss_pred ccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEeccccccee
Confidence 3 4567788999999999999999999999999754599999999987421 25666 79999999765431 11
Q ss_pred eEee---CCCCHHHHHHHHHHHcCcCCC
Q 024107 230 IKVS---ARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 230 ~~~~---g~~~~~~l~~~i~~~~~~~~~ 254 (272)
..+. +..+.+.|.+|+++.+.-+..
T Consensus 325 y~~~~~~~~~t~~~i~~F~~~~~~Gkl~ 352 (367)
T 3us3_A 325 MEMDDEEDLPSAEELEDWLEDVLEGEIN 352 (367)
T ss_dssp CCCCTTSCCCCHHHHHHHHHHHHHTSSC
T ss_pred ecCCcccccCCHHHHHHHHHHHHcCCcC
Confidence 1233 368999999999998865544
No 55
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.75 E-value=1.4e-17 Score=123.52 Aligned_cols=111 Identities=24% Similarity=0.457 Sum_probs=96.2
Q ss_pred CCCCeEEecccchhHHhhc-----------CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC
Q 024107 140 TNANVQIVVGKTFDDLVLN-----------SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH 207 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~-----------~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~ 207 (272)
....+..++.++|.+.+.+ .+++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l 84 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQEL 84 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHH
Confidence 3446889999999998864 468999999999999999999999999999987 799999999998 56
Q ss_pred C-CCcccCCCeEEEE-eCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCCC
Q 024107 208 P-KLQVEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQS 255 (272)
Q Consensus 208 ~-~~~v~~~P~l~~~-~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 255 (272)
. ++++.++|++++| ++|+. +++.|..+.+.|.+||++.++....+
T Consensus 85 ~~~~~v~~~Pt~~~~~~~G~~---~~~~G~~~~~~l~~~l~~~~~~~~~~ 131 (136)
T 2l5l_A 85 AGAFGIRSIPSILFIPMEGKP---EMAQGAMPKASFKKAIDEFLLKKEGH 131 (136)
T ss_dssp HHHTTCCSSCEEEEECSSSCC---EEEESCCCHHHHHHHHHHHHTSCTTS
T ss_pred HHHcCCCCCCEEEEECCCCcE---EEEeCCCCHHHHHHHHHHHhhccCCC
Confidence 4 8999999999999 56653 37899999999999999998766543
No 56
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.75 E-value=1.1e-17 Score=122.69 Aligned_cols=106 Identities=11% Similarity=0.067 Sum_probs=92.9
Q ss_pred CCCceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhc-----CceEEEEEeCCCcccchhHHhhcC
Q 024107 12 KFPLVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK-----GKIMFTAVDIADEDLAKPFLTLFG 84 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~-----~~i~~~~vd~~~~~~~~~l~~~~~ 84 (272)
..+.+..++.++|++.+ .++++++|.||++| ++|+++.|.|.++|+.+. +.+.|+.|||+.+ +++|++|+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~---~~l~~~~~ 89 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY---PDVIERMR 89 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC---HHHHHHTT
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc---HhHHHhcC
Confidence 34578999999999977 46889999999999 999999999999998764 4699999999998 89999999
Q ss_pred CCCCCceEEEEEeCCcce-eecCCCCCChHHHHHHHHHH
Q 024107 85 LEESKNTVVTAFDNKAIS-KFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~~-~~~~~g~~~~~~i~~fi~~~ 122 (272)
|.++ ||+ .+|.+++.. ...|.|.++.+.|.+|+.+.
T Consensus 90 v~~~-Pt~-~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSGF-PTM-RYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSS-SEE-EEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CccC-CEE-EEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999 999 788766543 36679999999999999874
No 57
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.75 E-value=9e-18 Score=121.09 Aligned_cols=100 Identities=16% Similarity=0.247 Sum_probs=86.7
Q ss_pred CeEEecccchhHHhhcCCC--cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCcccCCCeEEE
Q 024107 143 NVQIVVGKTFDDLVLNSHK--DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTLLF 220 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~--~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~~~~~v~~~P~l~~ 220 (272)
.+..++.++|.+.+.+.++ +++|+||++||++|+.+.|.+.++|.++. ++.|+.+|++.. ..+++|.++||+++
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~-~~~~~v~~~PT~~~ 79 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC-IQHYHDNCLPTIFV 79 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT-STTCCGGGCSEEEE
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh-HHHCCCCCCCEEEE
Confidence 5778899999998876554 89999999999999999999999999986 599999999986 46899999999999
Q ss_pred EeCCCCcCceEeeCC-------CCHHHHHHHHHHH
Q 024107 221 YPAGDKANPIKVSAR-------SSSKNIAAFIKEQ 248 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~-------~~~~~l~~~i~~~ 248 (272)
|++|+.+. ++.|. .+.+.|..+|.+.
T Consensus 80 fk~G~~v~--~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 80 YKNGQIEA--KFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EETTEEEE--EEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EECCEEEE--EEeChhhhCCCCCCHHHHHHHHHHc
Confidence 99998875 66664 4678888888764
No 58
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.75 E-value=4.3e-18 Score=123.03 Aligned_cols=111 Identities=27% Similarity=0.570 Sum_probs=96.4
Q ss_pred CCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCC-ceEEEEEeCCCC-CCC-CCcccCCCe
Q 024107 141 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD-NLVIAKIDASAN-EHP-KLQVEEYPT 217 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~-~v~~~~id~~~~-~~~-~~~v~~~P~ 217 (272)
...+..++.++|.+.+ ..+++++|+||++||++|+.+.|.+.+++..+.+.. ++.++.+|++.+ ++. ++++.++|+
T Consensus 6 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 84 (120)
T 1mek_A 6 EDHVLVLRKSNFAEAL-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 84 (120)
T ss_dssp ETTEEECCTTTHHHHH-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSE
T ss_pred CCCcEEechhhHHHHH-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccE
Confidence 4468899999999876 467899999999999999999999999999997532 699999999988 664 889999999
Q ss_pred EEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 218 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 218 l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
+++|++|+...+.++.|..+.+.|.+||++.++..
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 99999888653458999999999999999987653
No 59
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.75 E-value=6.4e-18 Score=119.40 Aligned_cols=101 Identities=18% Similarity=0.472 Sum_probs=89.0
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEE
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 221 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~ 221 (272)
+..++.++|.+. ...+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++ .++++.++|++++|
T Consensus 2 v~~l~~~~~~~~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQA-IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHH-HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHH-HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 567899999954 46788999999999999999999999999999987 799999999998 66 48999999999999
Q ss_pred eCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 222 PAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
++|+... ++.|..+.+.|.++|++.+
T Consensus 79 ~~G~~~~--~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVK--QLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEE--EEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEE--EEecCCCHHHHHHHHHHHh
Confidence 8886543 7899999999999998764
No 60
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.74 E-value=8.5e-18 Score=119.35 Aligned_cols=104 Identities=25% Similarity=0.554 Sum_probs=91.1
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 220 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~ 220 (272)
.+..++.++|.+.+ ..+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+ ++ .++++.++|++++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 46789999999654 6688999999999999999999999999999987 799999999998 55 4899999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
|++|+... ++.|..+.+.|.+||++.++.
T Consensus 79 ~~~g~~~~--~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 79 FKDGQPVE--VLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EETTEEEE--EEESCCCHHHHHHHHHTTC--
T ss_pred EeCCcEee--eEeCCCCHHHHHHHHHHHhhh
Confidence 98887553 789999999999999988764
No 61
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.74 E-value=2.6e-18 Score=125.28 Aligned_cols=104 Identities=23% Similarity=0.538 Sum_probs=87.6
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCCh--------------hHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCV--------------TCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH 207 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~--------------~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~ 207 (272)
.+..++.++|++.+...+++++|+||++||+ +|+.+.|.+.++++.+.+ ++.++.+|++.+ ++
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGT 81 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTTT
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHH
Confidence 4778999999988878899999999999999 999999999999999987 799999999998 66
Q ss_pred C-CCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 208 P-KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 208 ~-~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
. +++|.++|++++|++|+... ++.|..+.+.|.+||++.++
T Consensus 82 ~~~~~v~~~Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 82 APKYGIRGIPTLLLFKNGEVAA--TKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp GGGGTCCBSSEEEEEESSSEEE--EEESCCCHHHHHHHHTTTCC
T ss_pred HHHcCCCccCEEEEEECCEEEE--EEeCCCCHHHHHHHHHHHhC
Confidence 4 89999999999998887654 79999999999999988754
No 62
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.74 E-value=4.7e-18 Score=122.60 Aligned_cols=102 Identities=20% Similarity=0.403 Sum_probs=88.7
Q ss_pred CCeEEecccchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeE
Q 024107 142 ANVQIVVGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 218 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l 218 (272)
......+.++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+ ++ .+++|.++|++
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS---NVIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT---TSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCccccEE
Confidence 34556678899998753 68999999999999999999999999999987 499999999999 66 48999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
++|++|+.+. ++.|. +.+.|.++|++.+
T Consensus 89 ~~~~~G~~~~--~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFFKKGQKVG--EFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEESSSSEEE--EEESC-CHHHHHHHHHHHC
T ss_pred EEEeCCeEEE--EEcCC-CHHHHHHHHHHhC
Confidence 9998887654 78898 9999999998764
No 63
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.74 E-value=4.6e-18 Score=120.33 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=77.7
Q ss_pred cccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEEEeCCC
Q 024107 148 VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLFYPAGD 225 (272)
Q Consensus 148 ~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~~~~~ 225 (272)
+.++|++.+ ..+++++|+||++||++|+.+.|.+.++++.+. ++.++.+|++.+ ++. +++|.++||+++|++|+
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 346777766 668999999999999999999999999999984 699999999999 664 89999999999999887
Q ss_pred CcCceEeeCCCCHHHHHHHHHHHc
Q 024107 226 KANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 226 ~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
.+. ++.|..+.+.|.++|++.+
T Consensus 83 ~~~--~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EIL--RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEE--EEESSCCHHHHHHHHHTTC
T ss_pred EEE--EEeCCcCHHHHHHHHHHhh
Confidence 654 7899999999999999765
No 64
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.6e-17 Score=139.33 Aligned_cols=112 Identities=23% Similarity=0.436 Sum_probs=98.0
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC--C-CCC-CCcccCC
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA--N-EHP-KLQVEEY 215 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~--~-~~~-~~~v~~~ 215 (272)
.+..+..++.++|++.+.+.+++++|+|||+||++|+.+.|.|.+++..+.+ .+.++.+||+. + +++ +++|.++
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEEEEccCccCHHHHHhCCCCcc
Confidence 5567899999999999877788999999999999999999999999999987 69999999984 4 454 8899999
Q ss_pred CeEEEEeCCCC---------------cCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 216 PTLLFYPAGDK---------------ANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 216 P~l~~~~~~~~---------------~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
|++++|++|+. ..+..|.|..+.+.|++|+.+.++...
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v 145 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYV 145 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCE
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhccccc
Confidence 99999999862 124589999999999999999987653
No 65
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.73 E-value=2.7e-17 Score=117.51 Aligned_cols=103 Identities=22% Similarity=0.385 Sum_probs=88.9
Q ss_pred CCCeEEecccchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC-CC-CCC-CCcccCCC
Q 024107 141 NANVQIVVGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS-AN-EHP-KLQVEEYP 216 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~-~~-~~~-~~~v~~~P 216 (272)
.+.+..++.++|.+.+.. .+++++|+||++||++|+.+.|.+.+++..+. ++.++.+|++ .+ ++. ++++.++|
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~~~~~~~~v~~~P 80 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVP 80 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSBSS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC---CeEEEEEecCcchHHHHHHcCCCeee
Confidence 457899999999998865 58899999999999999999999999999987 4899999998 45 554 78999999
Q ss_pred eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 217 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 217 ~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+++++++|+... ++.|. +.+.|.++|++.+
T Consensus 81 t~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 81 TFKILKENSVVG--EVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp EEEEESSSSEEE--EEESS-CHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEE--EEcCC-CHHHHHHHHHHhh
Confidence 999998887653 67887 4899999998764
No 66
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.73 E-value=2e-17 Score=117.34 Aligned_cols=101 Identities=13% Similarity=0.259 Sum_probs=85.8
Q ss_pred eEEe-cccchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEE
Q 024107 144 VQIV-VGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLL 219 (272)
Q Consensus 144 v~~l-~~~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~ 219 (272)
+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.++.+|++.+ ++. ++++.++|+++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQGTAATNNISATPTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHhcCCCcccEEE
Confidence 4556 45789998864 68999999999999999999999999999993 699999999998 664 89999999999
Q ss_pred EEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 220 FYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+|++|+... ++.|. +.+.|.+||++.+|
T Consensus 80 ~~~~G~~~~--~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 80 FFRNKVRID--QYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp EEETTEEEE--EEESS-CHHHHHHHHHHHHC
T ss_pred EEECCeEEE--EEeCC-CHHHHHHHHHHhcC
Confidence 999887654 68885 44569999998765
No 67
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.72 E-value=2.5e-17 Score=115.78 Aligned_cols=101 Identities=24% Similarity=0.508 Sum_probs=89.8
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEE
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 221 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~ 221 (272)
|..++.++|++.+ ..+++++|+||++||++|+.+.+.+.++++.+.+ +.++.+|++.+ ++ .++++.++|++++|
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 3568899999988 5688999999999999999999999999999874 99999999998 56 48999999999999
Q ss_pred eCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 222 PAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++|+... ++.|..+.+.|.+||++.++
T Consensus 77 ~~g~~~~--~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVD--EIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEE--EEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhh--hccCCCCHHHHHHHHHHHhc
Confidence 8887553 78999999999999998875
No 68
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.72 E-value=3.7e-17 Score=115.50 Aligned_cols=101 Identities=25% Similarity=0.504 Sum_probs=87.7
Q ss_pred eEEecc-cchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEE
Q 024107 144 VQIVVG-KTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLL 219 (272)
Q Consensus 144 v~~l~~-~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~ 219 (272)
+..+++ ++|.+.+.+ .+++++|+||++||++|+.+.+.+.+++..+++ ++.++.+|++.+ ++ .++++.++|+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMPTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchHHHHHHcCCCcccEEE
Confidence 456777 889988764 688999999999999999999999999999975 799999999998 56 489999999999
Q ss_pred EEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 220 FYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+|++|+... ++.| .+.+.|.+||++.+
T Consensus 80 ~~~~G~~~~--~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 80 FLKNGVKVE--EFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEETTEEEE--EEES-CCHHHHHHHHHHTC
T ss_pred EEcCCcEEE--EEcC-CCHHHHHHHHHHhC
Confidence 999887654 6888 68899999998753
No 69
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.72 E-value=7e-17 Score=123.89 Aligned_cols=118 Identities=13% Similarity=0.151 Sum_probs=99.6
Q ss_pred HHHHHhhcCCCceEeeCcccccccccC--CcceEEEEEE-------cc-cchHHHHHHHHHHHHHhc-----CceEEEEE
Q 024107 4 ILQFLNYNKFPLVTKLTDINSASVHSS--PIKLQVYVFA-------KA-DDLKSLLEPLEDIARNFK-----GKIMFTAV 68 (272)
Q Consensus 4 l~~fi~~~s~~~v~~l~~~~f~~~~~~--~~~~~v~fy~-------~~-~~c~~~~~~~~~~a~~~~-----~~i~~~~v 68 (272)
..+++...+.+.+.++|+++|++++.. +.+++|.|++ .| ++|+.+.|.|+++|+.+. +++.|+.|
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 445666666778999999999998754 4578999999 49 999999999999999998 88999999
Q ss_pred eCCCcccchhHHhhcCCCCCCceEEEEEeCCccee-------------ecCC-C-CCChHHHHHHHHHHhcCc
Q 024107 69 DIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISK-------------FLLE-S-DLTPSNIEEFCSRLLHGT 126 (272)
Q Consensus 69 d~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~-------------~~~~-g-~~~~~~i~~fi~~~~~~~ 126 (272)
|++++ ++++++|||.+. ||+ ++|.+++... |.+. | .++++.|.+|+.+.++..
T Consensus 88 D~d~~---~~la~~~~I~si-Ptl-~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~ 155 (178)
T 3ga4_A 88 DVNEV---PQLVKDLKLQNV-PHL-VVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNIS 155 (178)
T ss_dssp ETTTC---HHHHHHTTCCSS-CEE-EEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCC
T ss_pred ECccC---HHHHHHcCCCCC-CEE-EEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCC
Confidence 99999 999999999999 999 8888765433 3332 4 799999999999988744
No 70
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.72 E-value=5.4e-17 Score=118.59 Aligned_cols=101 Identities=24% Similarity=0.404 Sum_probs=89.7
Q ss_pred CeEEecc-cchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEE
Q 024107 143 NVQIVVG-KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLL 219 (272)
Q Consensus 143 ~v~~l~~-~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~ 219 (272)
-+..+++ ++|++.+ ..+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+ ++. ++++.++|+++
T Consensus 20 mv~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 95 (125)
T 1r26_A 20 SVVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVSKCRVLQLPTFI 95 (125)
T ss_dssp CCEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 3888999 9999987 778999999999999999999999999999984 699999999998 664 89999999999
Q ss_pred EEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 220 FYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+|++|+.+. ++.| .+.+.|.++|++.+.
T Consensus 96 i~~~G~~~~--~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 96 IARSGKMLG--HVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEETTEEEE--EEES-SCHHHHHHHHHHHHH
T ss_pred EEeCCeEEE--EEeC-CCHHHHHHHHHHHhc
Confidence 998887653 6888 688999999998764
No 71
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.71 E-value=3.1e-17 Score=122.21 Aligned_cols=105 Identities=22% Similarity=0.412 Sum_probs=80.0
Q ss_pred CCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEE
Q 024107 142 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLL 219 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~ 219 (272)
+.+..++.++|.+.+...++ ++|+||++||++|+.+.+.|.+++..+.+ ++.|+.+|++.+ ++. ++++.++|+++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 45778899999998876666 99999999999999999999999999987 799999999998 664 89999999999
Q ss_pred EEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 220 FYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
+|++|+... ++.|..+.+.|.+||++.++.
T Consensus 110 ~~~~G~~~~--~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 110 LFRRGAPVA--TWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEETTEEEE--EEESCCCHHHHHHHHHHHHTC
T ss_pred EEeCCcEEE--EEeCCCCHHHHHHHHHHHHcc
Confidence 998887653 789999999999999998753
No 72
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=4.8e-17 Score=118.90 Aligned_cols=105 Identities=22% Similarity=0.495 Sum_probs=90.9
Q ss_pred CCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeE
Q 024107 141 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 218 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l 218 (272)
...+..++.++|++.+. +.++|+||++||++|+.+.|.+.++++.+.+. ++.++.+|++.+ ++ .+++|.++|++
T Consensus 6 ~~~v~~l~~~~f~~~~~---~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELLE---GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL-EVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHTS---SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHhC---CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC-CeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 45688999999998652 24999999999999999999999999998742 599999999998 56 48999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
++|++|+ . .++.|..+.+.|.+||++.++..
T Consensus 82 ~~~~~G~-~--~~~~G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 82 YHCKDGE-F--RRYQGPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp EEEETTE-E--EECCSCCCHHHHHHHHHTCGGGG
T ss_pred EEEeCCe-E--EEeecCCCHHHHHHHHHHHhhcc
Confidence 9998876 3 48999999999999999987644
No 73
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.71 E-value=6e-17 Score=117.63 Aligned_cols=104 Identities=21% Similarity=0.379 Sum_probs=91.1
Q ss_pred CCeEEecccchhHHhhc---CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCC
Q 024107 142 ANVQIVVGKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYP 216 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~---~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P 216 (272)
..+..++.++|.+.+.. .+++++|+||++||++|+.+.|.+.++++.+.+ +.++.+|++.+ ++ .++++.++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~P 89 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN---AVFLKVDVDELKPIAEQFSVEAMP 89 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---cEEEEEECCCCHHHHHHcCCCccc
Confidence 35667788999998866 689999999999999999999999999999874 99999999998 66 489999999
Q ss_pred eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 217 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 217 ~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
++++|++|+... ++.|.. .+.|.+||++.++.
T Consensus 90 t~~~~~~G~~~~--~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 90 TFLFMKEGDVKD--RVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp EEEEEETTEEEE--EEESSC-HHHHHHHHHHHHSC
T ss_pred EEEEEeCCEEEE--EEeCcC-HHHHHHHHHHHhcc
Confidence 999998887653 788988 99999999998763
No 74
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.71 E-value=4e-17 Score=130.16 Aligned_cols=108 Identities=22% Similarity=0.407 Sum_probs=96.4
Q ss_pred CCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeE
Q 024107 141 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTL 218 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l 218 (272)
...+..++..+|...+ ..+++++|+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+ ++. +++|.++||+
T Consensus 96 ~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 172 (210)
T 3apq_A 96 DPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCRMKGVNSYPSL 172 (210)
T ss_dssp CTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHHHcCCCcCCeE
Confidence 4468899999999987 6688999999999999999999999999999987 799999999998 564 8999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
++|++|+... ++.|..+.+.|.+||.+.++...
T Consensus 173 ~~~~~G~~~~--~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 173 FIFRSGMAAV--KYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp EEECTTSCCE--ECCSCCCHHHHHHHHHHHHHCCS
T ss_pred EEEECCCcee--EecCCCCHHHHHHHHHHhCcccc
Confidence 9998887643 79999999999999999987554
No 75
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.71 E-value=4.3e-17 Score=136.05 Aligned_cols=106 Identities=18% Similarity=0.368 Sum_probs=94.8
Q ss_pred CCCeEEecccchhHHhhcC-CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCe
Q 024107 141 NANVQIVVGKTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 217 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~-~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~ 217 (272)
...+..++.++|++.+..+ +++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.||++.+ ++ .+|+|.++||
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt 83 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQFGLRAIPT 83 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHTTTCCSSSE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHHcCCCCCCe
Confidence 3468999999999977533 78999999999999999999999999999987 799999999998 66 4999999999
Q ss_pred EEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 218 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 218 l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+++|++|+.+. ++.|..+.+.+..|+.+.+.
T Consensus 84 ~~~~~~G~~~~--~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 84 VYLFQNGQPVD--GFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp EEEEETTEEEE--EEESCCCHHHHHHHHHHHSC
T ss_pred EEEEECCEEEE--EeeCCCCHHHHHHHHHHHcC
Confidence 99999887654 79999999999999998873
No 76
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=3.9e-16 Score=115.58 Aligned_cols=105 Identities=15% Similarity=0.201 Sum_probs=89.8
Q ss_pred CCCeEEecccchhHHhhcC--CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCCcccCCCeE
Q 024107 141 NANVQIVVGKTFDDLVLNS--HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEHPKLQVEEYPTL 218 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~--~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~~~~~v~~~P~l 218 (272)
.+.+..++.++|.+.+... +++++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++.+. .+++|.++||+
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~-~~~~i~~~Pt~ 84 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI-EHYHDNCLPTI 84 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC-SSCCSSCCSEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc-ccCCCCCCCEE
Confidence 4468888889999988654 3689999999999999999999999999985 6999999998764 68899999999
Q ss_pred EEEeCCCCcCceEeeCCC-------CHHHHHHHHHHHcCc
Q 024107 219 LFYPAGDKANPIKVSARS-------SSKNIAAFIKEQLKE 251 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~-------~~~~l~~~i~~~~~~ 251 (272)
++|++|+.+. ++.|.. +.+.|..+|.++...
T Consensus 85 ~~~~~G~~v~--~~~G~~~~~~~~~~~~~l~~~l~~~~~i 122 (135)
T 2dbc_A 85 FVYKNGQIEG--KFIGIIECGGINLKLEELEWKLSEVGAI 122 (135)
T ss_dssp EEESSSSCSE--EEESTTTTTCTTCCHHHHHHHHHHHTSS
T ss_pred EEEECCEEEE--EEEeEEeeCCCcCCHHHHHHHHHHcCCc
Confidence 9999888765 677765 789999999987443
No 77
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.70 E-value=4.8e-17 Score=116.23 Aligned_cols=103 Identities=20% Similarity=0.466 Sum_probs=89.1
Q ss_pred CeEEec-ccchhHHhhc-C--CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCC
Q 024107 143 NVQIVV-GKTFDDLVLN-S--HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYP 216 (272)
Q Consensus 143 ~v~~l~-~~~~~~~v~~-~--~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P 216 (272)
.+..++ .++|++.+.. . +++++|+||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+ ++ .++++.++|
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~P 80 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAEAAGITAMP 80 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHHHHTCCBSS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHHHcCCCccc
Confidence 466774 5789988754 3 78999999999999999999999999999987 799999999998 66 488999999
Q ss_pred eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 217 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 217 ~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++++|++|+... ++.|. +.+.|.+||++.+.
T Consensus 81 t~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 81 TFHVYKDGVKAD--DLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEEEETTEEEE--EEESC-CHHHHHHHHHHHHC
T ss_pred EEEEEECCeEEE--EEcCC-CHHHHHHHHHHHhc
Confidence 999999887653 78888 99999999998864
No 78
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.70 E-value=6.9e-17 Score=115.08 Aligned_cols=100 Identities=25% Similarity=0.463 Sum_probs=86.1
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 220 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~ 220 (272)
.....+.++|++.+ ..+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+ ++ .+++|.++|++++
T Consensus 8 ~~~~~~~~~f~~~~-~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 83 (109)
T 3f3q_A 8 VTQFKTASEFDSAI-AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP---QADFYKLDVDELGDVAQKNEVSAMPTLLL 83 (109)
T ss_dssp CEECCSHHHHHHHT-TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccCCCCHHHHHHHH-hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 34455678898876 568999999999999999999999999999996 589999999998 66 4899999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
|++|+.+. ++.|. +.+.|.++|++++
T Consensus 84 ~~~G~~~~--~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 84 FKNGKEVA--KVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EETTEEEE--EEESS-CHHHHHHHHHHHC
T ss_pred EECCEEEE--EEeCC-CHHHHHHHHHhhC
Confidence 99887654 78888 7799999998764
No 79
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.70 E-value=4.3e-17 Score=122.81 Aligned_cols=99 Identities=13% Similarity=0.187 Sum_probs=88.2
Q ss_pred cccchhHHhh-cCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEEEeCC
Q 024107 148 VGKTFDDLVL-NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLFYPAG 224 (272)
Q Consensus 148 ~~~~~~~~v~-~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~~~~ 224 (272)
+.++|++.+. ..+++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++. +++|.++||+++|++|
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 87 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNG 87 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHHTTCCSSSEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHHcCCCccCeEEEEECC
Confidence 5678999886 5689999999999999999999999999999986 699999999988 564 8999999999999999
Q ss_pred CCc---------CceEeeC-CCCHHHHHHHHHHHcC
Q 024107 225 DKA---------NPIKVSA-RSSSKNIAAFIKEQLK 250 (272)
Q Consensus 225 ~~~---------~~~~~~g-~~~~~~l~~~i~~~~~ 250 (272)
+.+ . ++.| ..+.+.|.++|++.+.
T Consensus 88 ~~v~~~~g~~~~~--~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 88 QHMKVDYGSPDHT--KFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp EEEEEECSSSCCS--CEESCCSSHHHHHHHHHHHHH
T ss_pred eEEEeecCCCCCC--eEeeecCCHHHHHHHHHHHHH
Confidence 876 4 6889 8899999999998763
No 80
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.70 E-value=6.1e-17 Score=115.77 Aligned_cols=103 Identities=18% Similarity=0.316 Sum_probs=84.6
Q ss_pred eEEecc-cchhHHhh--cCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeE
Q 024107 144 VQIVVG-KTFDDLVL--NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 218 (272)
Q Consensus 144 v~~l~~-~~~~~~v~--~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l 218 (272)
+..+++ ++|.+.+. ..+++++|+||++||++|+.+.|.+.+++..++.. ++.++.+|++.+ ++ .++++.++|++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS-NVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT-TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC-CEEEEEEecccCHHHHHHcCCCcccEE
Confidence 567887 88998875 34789999999999999999999999999997432 699999999998 56 48999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++|++|+... ++.|. ..+.|.++|++.++
T Consensus 81 ~~~~~G~~~~--~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 81 IIIHKGTILK--ELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEETTEEEE--EECSC-CHHHHHHHHHHHHH
T ss_pred EEEECCEEEE--EecCC-CHHHHHHHHHHHHh
Confidence 9998887654 67887 45569999998764
No 81
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.69 E-value=1.5e-16 Score=111.97 Aligned_cols=99 Identities=21% Similarity=0.512 Sum_probs=85.1
Q ss_pred EEecc-cchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEE
Q 024107 145 QIVVG-KTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 220 (272)
Q Consensus 145 ~~l~~-~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~ 220 (272)
..+++ ++|++.+.. .+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+ ++ .++++.++|++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAAAKYSVTAMPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHHHHcCCccccEEEE
Confidence 45666 788888754 68899999999999999999999999999986 599999999998 56 4889999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
|++|+... ++.| .+.+.|.+||++.+
T Consensus 79 ~~~g~~~~--~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVD--RFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EETTEEEE--EEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEE--EEeC-CCHHHHHHHHHhhC
Confidence 99887653 6888 68999999998764
No 82
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.69 E-value=8.9e-17 Score=115.01 Aligned_cols=103 Identities=17% Similarity=0.420 Sum_probs=89.2
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCe
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPT 217 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~ 217 (272)
.++....++.++|++.+ ..+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+ ++ .++++.++|+
T Consensus 7 ~~~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt 82 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVSEVTEKENITSMPT 82 (112)
T ss_dssp --CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred ceeEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCHHHHHHcCCCcccE
Confidence 34467788899999987 568899999999999999999999999999986 599999999998 56 4899999999
Q ss_pred EEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 218 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 218 l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+++|++|+... ++.|. +.+.|.+||++.+
T Consensus 83 ~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 83 FKVYKNGSSVD--TLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEEETTEEEE--EEESC-CHHHHHHHHHTTC
T ss_pred EEEEECCcEEE--EEeCC-CHHHHHHHHHHhh
Confidence 99999887653 68898 9999999998764
No 83
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.69 E-value=1.5e-16 Score=112.81 Aligned_cols=105 Identities=16% Similarity=0.162 Sum_probs=94.6
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
.+.+..++.++|++.+.++++++|+||++| ++|+.+.|.+.++++.+.+.+.|+.+|++.. ++++++|+|.++ ||
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~i~~~-Pt 78 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDEN---QKIADKYSVLNI-PT 78 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccC---HHHHHhcCcccC-CE
Confidence 467889999999999988999999999999 9999999999999999998899999999999 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
+ .++.++. ....+.|..+.+.|.+++.+++
T Consensus 79 ~-~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 79 T-LIFVNGQ-LVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHHHC
T ss_pred E-EEEcCCc-EEEeeeccCCHHHHHHHHHHHh
Confidence 9 6775553 3444688999999999999875
No 84
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.69 E-value=2e-16 Score=115.27 Aligned_cols=103 Identities=23% Similarity=0.422 Sum_probs=88.6
Q ss_pred CCCeEEecccchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC-CC-CCC-CCcccCCC
Q 024107 141 NANVQIVVGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS-AN-EHP-KLQVEEYP 216 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~-~~-~~~-~~~v~~~P 216 (272)
.+.+..++.++|.+.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.++.+|++ .+ ++. ++++.++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCcchHHHHHHcCCCeee
Confidence 446889999999998865 68899999999999999999999999999987 4899999998 45 554 78999999
Q ss_pred eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 217 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 217 ~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+++++++|+... ++.|.. .+.|.++|++..
T Consensus 94 t~~~~~~G~~~~--~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSVVG--EVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEEEE--EEESSC-HHHHHHHHHHHT
T ss_pred EEEEEeCCcEEE--EEcCCC-HHHHHHHHHHhh
Confidence 999999887654 678875 899999998764
No 85
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=3e-16 Score=116.69 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=96.7
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc---eEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK---IMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~---i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
...+..++.++|.+.+..+++++|+||++| ++|+++.|.|.++++.+.+. +.|+.|||+.+ .+++++|+|.++
T Consensus 16 ~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~~ 92 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA---SMLASKFDVSGY 92 (140)
T ss_dssp ETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC---HHHHHHTTCCSS
T ss_pred CCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc---HHHHHHCCCCcc
Confidence 456889999999999888899999999999 99999999999999999875 99999999998 899999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCcc
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTL 127 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 127 (272)
||+ .++.++. ...+.|..+.+.|.+|+.+.+....
T Consensus 93 -Pt~-~~~~~G~--~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 93 -PTI-KILKKGQ--AVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp -SEE-EEEETTE--EEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred -CeE-EEEECCc--EEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 999 7776654 4556899999999999999987543
No 86
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=3e-16 Score=115.16 Aligned_cols=108 Identities=18% Similarity=0.091 Sum_probs=95.8
Q ss_pred CCCceEeeCcccccc-cccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 12 KFPLVTKLTDINSAS-VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 12 s~~~v~~l~~~~f~~-~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
..+.+..++.++|.+ +..++++++|+||++| ++|+++.|.|.++++.+.+.+.|+.||++.+ .+++++|+|.++
T Consensus 15 ~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~~~- 90 (130)
T 2dml_A 15 SSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKH---QSLGGQYGVQGF- 90 (130)
T ss_dssp TTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTC---HHHHHHHTCCSS-
T ss_pred CCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCC---HHHHHHcCCCcc-
Confidence 345688999999998 4577889999999999 9999999999999999998899999999998 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
||+ .++++++.....+.|..+.+.+.+|+.+.+.
T Consensus 91 Pt~-~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 91 PTI-KIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp SEE-EEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred CEE-EEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 999 8887765435666899999999999999864
No 87
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.69 E-value=1.8e-16 Score=111.83 Aligned_cols=99 Identities=19% Similarity=0.454 Sum_probs=84.9
Q ss_pred EEe-cccchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEE
Q 024107 145 QIV-VGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLF 220 (272)
Q Consensus 145 ~~l-~~~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~ 220 (272)
..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.++.+|++.+ ++ .++++.++|++++
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 79 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS---NVIFLEVDVDDCQDVASESEVKSMPTFQF 79 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST---TSEEEEEETTTCHHHHHHTTCCBSSEEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc---CeEEEEEEhhhhHHHHHHcCCCcCcEEEE
Confidence 344 34678877753 58899999999999999999999999999997 499999999998 66 4899999999999
Q ss_pred EeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 221 YPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
|++|+.+. ++.|. +.+.|.++|++.+
T Consensus 80 ~~~g~~~~--~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 80 FKKGQKVG--EFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EETTEEEE--EEESS-CHHHHHHHHHHHC
T ss_pred EECCeEEE--EEeCC-CHHHHHHHHHHhC
Confidence 98887654 78898 9999999999864
No 88
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.68 E-value=1.4e-16 Score=114.88 Aligned_cols=100 Identities=20% Similarity=0.464 Sum_probs=87.0
Q ss_pred CeEEecc-cchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeE
Q 024107 143 NVQIVVG-KTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTL 218 (272)
Q Consensus 143 ~v~~l~~-~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l 218 (272)
.+..+++ ++|.+.+.+ .+++++|+||++||++|+.+.|.+.++++.+ ++.++.+|++.+ ++. ++++.++|++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 89 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTF 89 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHHHcCCCccceE
Confidence 3788888 889998864 6889999999999999999999999999887 489999999998 564 8999999999
Q ss_pred EEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 219 LFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
++|++|+... ++.| .+.+.|.++|++.+
T Consensus 90 ~~~~~G~~~~--~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVG--DVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEE--EEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEE--EEeC-CCHHHHHHHHHHhC
Confidence 9999887653 6888 68899999998764
No 89
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.68 E-value=2.6e-16 Score=114.83 Aligned_cols=104 Identities=20% Similarity=0.411 Sum_probs=89.0
Q ss_pred CCCCeEEe-cccchhHHhhc---CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCccc
Q 024107 140 TNANVQIV-VGKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVE 213 (272)
Q Consensus 140 ~~~~v~~l-~~~~~~~~v~~---~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~ 213 (272)
....+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+.+++..+. ++.++.+|++.+ ++. +++|.
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~ 90 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQ 90 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHHHTTCC
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHHcCCC
Confidence 34467777 55889888765 58899999999999999999999999999986 599999999998 664 89999
Q ss_pred CCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 214 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 214 ~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
++|++++|++|+.+. ++.| .+.+.|.++|++.+
T Consensus 91 ~~Pt~~~~~~G~~~~--~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 91 AMPTFMFLKEGKILD--KVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SSSEEEEEETTEEEE--EEES-CCHHHHHHHHHHHC
T ss_pred ccCEEEEEECCEEEE--EEeC-CCHHHHHHHHHHhc
Confidence 999999998887653 6788 58999999999875
No 90
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.68 E-value=2.5e-17 Score=131.62 Aligned_cols=128 Identities=17% Similarity=0.278 Sum_probs=103.6
Q ss_pred HHHHHHHHhcCccccccccCCCCCCCCCCeEEe-cccchhHHhhcCC--CcEEEEEECCCChhHHHhHHHHHHHHHHhcC
Q 024107 115 IEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIV-VGKTFDDLVLNSH--KDVLLEVYTPWCVTCETTSKQIEKLAKHFKG 191 (272)
Q Consensus 115 i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~v~~~~--~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~ 191 (272)
...|+.++..+++....++.+ +....+.+..+ +.++|.+.+...+ ++++|+||++||++|+.+.|.|..++..+.
T Consensus 73 d~~fl~~~r~~Rl~el~~~~~-~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~- 150 (217)
T 2trc_P 73 DEGCLRKYRRQCMQDMHQKLS-FGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP- 150 (217)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-
Confidence 356888887777766554432 33456678888 7899999986654 899999999999999999999999999985
Q ss_pred CCceEEEEEeCCCC-CCC-CCcccCCCeEEEEeCCCCcCceEeeCCCCH-------HHHHHHHHHHc
Q 024107 192 LDNLVIAKIDASAN-EHP-KLQVEEYPTLLFYPAGDKANPIKVSARSSS-------KNIAAFIKEQL 249 (272)
Q Consensus 192 ~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~-------~~l~~~i~~~~ 249 (272)
++.|+.||++ + .+. +|+|.++||+++|++|..+. ++.|..+. +.|..||.++-
T Consensus 151 --~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v~--~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 151 --MVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELIS--NFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp --TSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEEE--EETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred --CeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEEE--EEeCCcccCcccCCHHHHHHHHHHcC
Confidence 6999999999 5 664 89999999999999887654 67787664 89999998763
No 91
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.68 E-value=3.9e-16 Score=116.57 Aligned_cols=102 Identities=16% Similarity=0.240 Sum_probs=84.6
Q ss_pred cccchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEEEeCC
Q 024107 148 VGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLFYPAG 224 (272)
Q Consensus 148 ~~~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~~~~ 224 (272)
+.++|++.+.. ++++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+ ++. +++|.++||+++|++|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G 87 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRN 87 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHHHHHHcCCCCCCEEEEEECC
Confidence 45778887765 689999999999999999999999999999977 799999999998 664 8999999999999988
Q ss_pred CCcCc-------eEeeCCCC-HHHHHHHHHHHcCc
Q 024107 225 DKANP-------IKVSARSS-SKNIAAFIKEQLKE 251 (272)
Q Consensus 225 ~~~~~-------~~~~g~~~-~~~l~~~i~~~~~~ 251 (272)
+.+.. .+..|..+ .+.|.++|++.+..
T Consensus 88 ~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 88 KHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp EEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 76520 02445554 89999999987653
No 92
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.68 E-value=4.7e-17 Score=119.39 Aligned_cols=94 Identities=22% Similarity=0.416 Sum_probs=81.7
Q ss_pred cchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEEEeCCCCc
Q 024107 150 KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLFYPAGDKA 227 (272)
Q Consensus 150 ~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~~~~~~~ 227 (272)
.++.+.+...+++++|+||++||++|+.+.|.+.++++.+++ ++.++.+|++.+ ++. +++|.++|++++|++|+.+
T Consensus 32 ~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 32 SNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred ccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 333333446789999999999999999999999999999986 799999999999 664 8999999999999888765
Q ss_pred CceEeeCCCCHHHHHHHHHH
Q 024107 228 NPIKVSARSSSKNIAAFIKE 247 (272)
Q Consensus 228 ~~~~~~g~~~~~~l~~~i~~ 247 (272)
. ++.|..+.+.|.+||++
T Consensus 110 ~--~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 110 A--RKDHFVSSNDLIALIKK 127 (128)
T ss_dssp E--EESSCCCHHHHHHHHTT
T ss_pred E--EecCCCCHHHHHHHHHh
Confidence 3 79999999999999975
No 93
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.67 E-value=6.4e-16 Score=109.57 Aligned_cols=104 Identities=20% Similarity=0.256 Sum_probs=91.2
Q ss_pred CceEeeCcccccc-cccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 14 PLVTKLTDINSAS-VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 14 ~~v~~l~~~~f~~-~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
+.+.+++.++|.+ +..++++++|+||++| ++|+.+.|.+.++++.+.+++.|+.+|++.+ ++++++||+.++ ||
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt 77 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYGIRGI-PT 77 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC---TTHHHHTTCCSS-SE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCC---HHHHHHcCCccc-CE
Confidence 4678899999986 4577889999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
+ .++.+|. ....+.|..+.+.+.+|+.+.+
T Consensus 78 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 78 L-LLFKNGE-VAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred E-EEEeCCE-EEEEEecCCCHHHHHHHHHHhh
Confidence 9 7775543 3445588899999999999875
No 94
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.67 E-value=7.8e-17 Score=130.54 Aligned_cols=128 Identities=15% Similarity=0.224 Sum_probs=101.8
Q ss_pred HHHHHHhcCccccccccCCCCCCCCCCeEEe-cccchhHHhhc--CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCC
Q 024107 117 EFCSRLLHGTLTPYLKSQPIPDNTNANVQIV-VGKTFDDLVLN--SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD 193 (272)
Q Consensus 117 ~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~v~~--~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~ 193 (272)
.|+.++..+++.+..++.+ +....+.+..+ +.++|.+.+.. .+++++|+||++||++|+.+.|.|..+|..+.
T Consensus 88 ~fL~~~r~~Rl~el~~~~~-~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--- 163 (245)
T 1a0r_P 88 NCLRKYRRQCMQDMHQKLS-FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP--- 163 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT---
T ss_pred HHHHHHHHHHHHHHHHHhh-ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---
Confidence 4777777777766655433 33356678889 67999998864 37899999999999999999999999999986
Q ss_pred ceEEEEEeCCCCCC-CCCcccCCCeEEEEeCCCCcCceEeeCC-------CCHHHHHHHHHHHcC
Q 024107 194 NLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSAR-------SSSKNIAAFIKEQLK 250 (272)
Q Consensus 194 ~v~~~~id~~~~~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~-------~~~~~l~~~i~~~~~ 250 (272)
.+.|+.||++..++ ..|+|.++||+++|++|..+. ++.|. .+.+.|..||.++-.
T Consensus 164 ~v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~~v~--~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 164 MVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELLS--NFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp TSEEEEEEHHHHCCTTSSCTTTCSEEEEEETTEEEE--EETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred CCEEEEEeCCcHHHHHHCCCCCCCEEEEEECCEEEE--EEeCCcccccccccHHHHHHHHHHcCC
Confidence 59999999987555 489999999999999887654 55553 356789999998744
No 95
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.67 E-value=3.2e-16 Score=111.63 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=92.9
Q ss_pred ceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 15 LVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 15 ~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
.+..++.++|.+.+ .++++++|.||++| ++|+.+.|.+.++++.+.+++.|+.+|++.+ ++++++|||.++ ||+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt~ 80 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEE---KTLFQRFSLKGV-PQI 80 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTC---HHHHHHTTCCSS-CEE
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcC---hhHHHhcCCCcC-CEE
Confidence 57788999999988 78899999999999 9999999999999999998899999999999 899999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
.++.++. ....+.|..+.+.+.+|+.+.++
T Consensus 81 -~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 81 -LYFKDGE-YKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp -EEEETTE-EEEEEESSCCHHHHHHHHHHHHH
T ss_pred -EEEECCE-EEEEEeccCCHHHHHHHHHHHhc
Confidence 7776553 33445888999999999998764
No 96
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.67 E-value=1.3e-16 Score=118.88 Aligned_cols=108 Identities=16% Similarity=0.230 Sum_probs=96.1
Q ss_pred CCCceEeeCccccc-ccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 12 KFPLVTKLTDINSA-SVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 12 s~~~v~~l~~~~f~-~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
..+.+..++.++|. .+..++++++|+||++| ++|+++.|.|.++++.+.+++.|+.||++.. +++|++|+|.++
T Consensus 4 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~- 79 (140)
T 3hz4_A 4 NGSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATN---PWTAEKYGVQGT- 79 (140)
T ss_dssp CTTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTC---HHHHHHHTCCEE-
T ss_pred CCcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcC---HhHHHHCCCCcC-
Confidence 35678999999999 57778899999999999 9999999999999999999999999999999 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
||+ .++.++. ....+.|..+.+.|.+|+.+.+..
T Consensus 80 Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 80 PTF-KFFCHGR-PVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp SEE-EEEETTE-EEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CEE-EEEeCCc-EEEEEcCCCCHHHHHHHHHHHhcc
Confidence 999 7776554 344568899999999999999864
No 97
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.67 E-value=4e-16 Score=127.19 Aligned_cols=113 Identities=19% Similarity=0.368 Sum_probs=94.8
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCC-ceEEEEEeCC--CC-CCC-CCcccC
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD-NLVIAKIDAS--AN-EHP-KLQVEE 214 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~-~v~~~~id~~--~~-~~~-~~~v~~ 214 (272)
....+..++.++|++.+...+++++|+||++||++|+.+.|.|.++++.+.+.. .+.++.+||+ .+ +++ +++|.+
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 355799999999999998888999999999999999999999999999997522 6999999994 45 454 889999
Q ss_pred CCeEEEEeCCCCcC---ceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 215 YPTLLFYPAGDKAN---PIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 215 ~P~l~~~~~~~~~~---~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
+|++++|++|++.. .+++.| .+.+.|.++|.+.+....
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT
T ss_pred cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc
Confidence 99999999876542 223455 699999999999987654
No 98
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.67 E-value=4.8e-16 Score=117.59 Aligned_cols=107 Identities=19% Similarity=0.425 Sum_probs=89.9
Q ss_pred CCCeEEecc-cchhHHhhcC-CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCC
Q 024107 141 NANVQIVVG-KTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYP 216 (272)
Q Consensus 141 ~~~v~~l~~-~~~~~~v~~~-~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P 216 (272)
.+.+..++. ++|.+.+... +++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+ ++. +++|.++|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~P 87 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVPEVSEKYEISSVP 87 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCHHHHHHcCCCCCC
Confidence 345777875 8898877543 8899999999999999999999999999984 699999999998 564 89999999
Q ss_pred eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 217 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 217 ~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
++++|++|+.+. ++.| .+.+.|.+||++.++...
T Consensus 88 t~~~~~~G~~~~--~~~G-~~~~~l~~~i~~~l~~~~ 121 (153)
T 2wz9_A 88 TFLFFKNSQKID--RLDG-AHAPELTKKVQRHASSGS 121 (153)
T ss_dssp EEEEEETTEEEE--EEES-SCHHHHHHHHHHHSCTTS
T ss_pred EEEEEECCEEEE--EEeC-CCHHHHHHHHHHHhcccc
Confidence 999999776543 6777 477899999999987654
No 99
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.67 E-value=4.9e-16 Score=109.68 Aligned_cols=102 Identities=18% Similarity=0.179 Sum_probs=91.0
Q ss_pred CceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 14 PLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 14 ~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
..+.++++++|++.+ ++++++|+||++| ++|+.+.|.|.++++.+.+++.|+.+|++.. ++++++|++.++ ||+
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~ 77 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDEN---PSTAAKYEVMSI-PTL 77 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSB-SEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcC---HHHHHhCCCccc-CEE
Confidence 457888999999988 8889999999999 9999999999999999998899999999999 899999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
.++.+|+ ....+.|..+.+.+.+|+.+.
T Consensus 78 -~~~~~G~-~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 78 -IVFKDGQ-PVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp -EEEETTE-EEEEEESCCCHHHHHHHHHTT
T ss_pred -EEEeCCe-EEEEEeCCCCHHHHHHHHHHh
Confidence 7777553 344568899999999999864
No 100
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=5.2e-16 Score=114.26 Aligned_cols=107 Identities=22% Similarity=0.178 Sum_probs=95.1
Q ss_pred CCceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhc----CceEEEEEeCCCcccchhHHhhcCCC
Q 024107 13 FPLVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK----GKIMFTAVDIADEDLAKPFLTLFGLE 86 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~----~~i~~~~vd~~~~~~~~~l~~~~~i~ 86 (272)
...+..++.++|.+.+ .++++++|+||++| ++|+++.|.|.++++.+. +.+.|+.|||+.+ +.+|++|+|.
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~ 82 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN---QVLASRYGIR 82 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC---CHHHHHHTCC
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC---HHHHHhCCCC
Confidence 4468899999999865 67789999999999 999999999999999997 6799999999998 8999999999
Q ss_pred CCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 87 ESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 87 ~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
++ ||+ .+++++. ....+.|.++.+.|.+|+.+.+..
T Consensus 83 ~~-Pt~-~~~~~g~-~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 83 GF-PTI-KIFQKGE-SPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp SS-SEE-EEEETTE-EEEEECSCCSHHHHHHHHHHHHHH
T ss_pred ee-CeE-EEEeCCC-ceEEecCCCCHHHHHHHHHHHhhc
Confidence 99 999 7887753 445568999999999999998764
No 101
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.66 E-value=1.5e-16 Score=114.30 Aligned_cols=100 Identities=16% Similarity=0.372 Sum_probs=83.4
Q ss_pred CCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEE
Q 024107 142 ANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLL 219 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~ 219 (272)
+.+..+++.+..+.+...+++++|+||++||++|+.+.|.+.+++..+.+ +.++.+|++.+ ++. ++++.++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 34556666544333456789999999999999999999999999999874 99999999998 664 89999999999
Q ss_pred EEeCCCCcCceEeeCCCCHHHHHHHHHH
Q 024107 220 FYPAGDKANPIKVSARSSSKNIAAFIKE 247 (272)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 247 (272)
+|++|+... ++.|.. .+.|.++|++
T Consensus 89 ~~~~G~~~~--~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDGQLIG--KIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETTEEEE--EEESSC-HHHHHHHHHT
T ss_pred EEeCCeEEE--EEeCCC-HHHHHHHHHh
Confidence 998887654 788988 9999999875
No 102
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.66 E-value=3.8e-16 Score=126.64 Aligned_cols=106 Identities=13% Similarity=0.295 Sum_probs=91.1
Q ss_pred CCCeEEecccchhHHhhcCCCcEEEEEE--CCCChhHHHhHHHHHHHHHHhcC-CCceEEEEEeCCC-----C-CCC-CC
Q 024107 141 NANVQIVVGKTFDDLVLNSHKDVLLEVY--TPWCVTCETTSKQIEKLAKHFKG-LDNLVIAKIDASA-----N-EHP-KL 210 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~~~~~lv~f~--~~~C~~c~~~~~~~~~~a~~~~~-~~~v~~~~id~~~-----~-~~~-~~ 210 (272)
...+..++..+|++.+ ..+++++|.|| ||||+ +.|.|.++|..+.+ .+++.|+.|||+. + +++ +|
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp CTTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 4468899999999954 67889999999 99998 99999999999964 3379999999998 6 564 89
Q ss_pred ccc--CCCeEEEEeCCCCcCceEe--eCCCCHHHHHHHHHHHcCcC
Q 024107 211 QVE--EYPTLLFYPAGDKANPIKV--SARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 211 ~v~--~~P~l~~~~~~~~~~~~~~--~g~~~~~~l~~~i~~~~~~~ 252 (272)
+|. ++||+++|+ |....+++| .|..+.+.|.+||+++++..
T Consensus 90 ~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~ 134 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLY 134 (248)
T ss_dssp TCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCC
T ss_pred CCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccc
Confidence 999 999999999 873235678 89999999999999998744
No 103
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.66 E-value=3.7e-16 Score=110.43 Aligned_cols=95 Identities=12% Similarity=0.090 Sum_probs=80.8
Q ss_pred Cccccccccc--CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEE
Q 024107 20 TDINSASVHS--SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAF 96 (272)
Q Consensus 20 ~~~~f~~~~~--~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~ 96 (272)
+.++|++.+. ++++++|.||++| ++|+.+.|.|.++++.+.+ +.|+.||++++ ++++++|||.++ ||+ .++
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~~---~~l~~~~~V~~~-PT~-~~~ 80 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDEC---EDIAQDNQIACM-PTF-LFM 80 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTTC---HHHHHHTTCCBS-SEE-EEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecccC---HHHHHHcCCCee-cEE-EEE
Confidence 4577888763 3678999999999 9999999999999999976 89999999999 899999999999 999 788
Q ss_pred eCCcceeecCCCCCChHHHHHHHHHH
Q 024107 97 DNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
.+|.. ..++.| .+.+.|.+|+.+.
T Consensus 81 ~~G~~-v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 81 KNGQK-LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp ETTEE-EEEEES-CCHHHHHHHHHHH
T ss_pred ECCEE-EEEEeC-cCHHHHHHHHHhc
Confidence 76643 333466 6899999999874
No 104
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.66 E-value=2.7e-16 Score=114.92 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=81.7
Q ss_pred hcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEe--CCCC-CC-CCCcccCCCeEEEEe-CCCCcCceE
Q 024107 157 LNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKID--ASAN-EH-PKLQVEEYPTLLFYP-AGDKANPIK 231 (272)
Q Consensus 157 ~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id--~~~~-~~-~~~~v~~~P~l~~~~-~~~~~~~~~ 231 (272)
...+++++|+||++||++|+.+.+.+.+++..+++ ++.++.+| ++.+ ++ .++++.++|++++|. +|+... +
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~--~ 98 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFY--V 98 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEE--E
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEE--E
Confidence 35678999999999999999999999999999975 79999999 7777 55 488999999999998 665443 7
Q ss_pred eeCCCCHHHHHHHHHHHcCcCCC
Q 024107 232 VSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 232 ~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
+.|..+.+.|.++|++.++....
T Consensus 99 ~~G~~~~~~l~~~l~~~~~~~~~ 121 (126)
T 2l57_A 99 HQGLMRKNNIETILNSLGVKEGH 121 (126)
T ss_dssp EESCCCHHHHHHHHHHHCCCCCC
T ss_pred ecCCCCHHHHHHHHHHHhccccc
Confidence 89999999999999999876654
No 105
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.66 E-value=5.1e-16 Score=127.20 Aligned_cols=136 Identities=22% Similarity=0.381 Sum_probs=103.4
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccCCcceEEEEEEcc-c-c---hHHHHHHHHHHHHHhcCc---eEEEEEeCCCc
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSSPIKLQVYVFAKA-D-D---LKSLLEPLEDIARNFKGK---IMFTAVDIADE 73 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~-~---c~~~~~~~~~~a~~~~~~---i~~~~vd~~~~ 73 (272)
++|.+||..++.|+|.++|.+++.++.+. +++|.|+... . . .+.+...+.++|++++++ +.|+.+|+...
T Consensus 102 ~~l~~fi~~~~~Plv~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~ 179 (252)
T 2h8l_A 102 GKIKKFIQENIFGICPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF 179 (252)
T ss_dssp HHHHHHHHHHSSCSSCEECTTTHHHHSSS--SEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT
T ss_pred HHHHHHHHhcccCCeeecccccHhhhcCC--CeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHH
Confidence 47999999999999999999999887543 5677777544 2 2 235888999999999987 99999999988
Q ss_pred ccchhHHhhcCC--C--CCCceEEEEEeCCcceeecCCCCCChHH--HHHHHHHHhcCccccccccCCCCCCCCCCeE
Q 024107 74 DLAKPFLTLFGL--E--ESKNTVVTAFDNKAISKFLLESDLTPSN--IEEFCSRLLHGTLTPYLKSQPIPDNTNANVQ 145 (272)
Q Consensus 74 ~~~~~l~~~~~i--~--~~~P~i~~~~~~~~~~~~~~~g~~~~~~--i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~ 145 (272)
..+++.||+ . .. |++ ++++. .+.+|.+.++.+.++ |.+|+.+++.|++.++++|+++|+.+.++|+
T Consensus 180 ---~~~~~~fgl~~~~~~~-P~v-~i~~~-~~~ky~~~~~~t~~~~~i~~F~~~~~~Gkl~~~~kSe~iPe~~~~pV~ 251 (252)
T 2h8l_A 180 ---SHELSDFGLESTAGEI-PVV-AIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGAAA 251 (252)
T ss_dssp ---HHHHGGGTCCCCSCSS-CEE-EEECT-TSCEEECCSCCCTTSHHHHHHHHHHHHTCSCCCC--------------
T ss_pred ---HHHHHHcCCCCccCCC-CEE-EEEeC-cCcEecCCcccCcchHHHHHHHHHHHCCCccccccCCCCCCCCCCCCC
Confidence 789999999 4 35 999 78765 457888888899899 9999999999999999999999997666654
No 106
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.66 E-value=1.1e-15 Score=123.87 Aligned_cols=144 Identities=11% Similarity=0.067 Sum_probs=114.9
Q ss_pred CCceEeeCcccccccccCCcceEEEEE--Ecc-cchHHHHHHHHHHHHHhc---CceEEEEEeCCC-----cccchhHHh
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVF--AKA-DDLKSLLEPLEDIARNFK---GKIMFTAVDIAD-----EDLAKPFLT 81 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy--~~~-~~c~~~~~~~~~~a~~~~---~~i~~~~vd~~~-----~~~~~~l~~ 81 (272)
.+.+..+++.+|++++.++++++|.|| ++| + +.|.|.++|+.+. +.+.|+.|||++ + +++|+
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n---~~la~ 87 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN---KALGD 87 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT---HHHHH
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccccc---HHHHH
Confidence 456889999999998888889999999 899 5 9999999999994 479999999998 5 89999
Q ss_pred hcCCC--CCCceEEEEEeCCc-ceeecC--CCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHh
Q 024107 82 LFGLE--ESKNTVVTAFDNKA-ISKFLL--ESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLV 156 (272)
Q Consensus 82 ~~~i~--~~~P~i~~~~~~~~-~~~~~~--~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v 156 (272)
+|||. ++ ||+ .+|. +. .....| .|.++.+.|.+|+.+.++.. ...+. ....++.++
T Consensus 88 ~~~V~~~~~-PTl-~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~-------~~~~g---------~i~~~d~l~ 148 (248)
T 2c0g_A 88 RYKVDDKNF-PSI-FLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLY-------IGRDG---------CIKEFNEVL 148 (248)
T ss_dssp HTTCCTTSC-CEE-EEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCC-------CCCTT---------CCHHHHHHH
T ss_pred HhCCCcCCC-CeE-EEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccc-------cCCCC---------chHHHHHHH
Confidence 99999 99 999 8888 65 234556 89999999999999986411 01111 224566655
Q ss_pred hcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhc
Q 024107 157 LNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFK 190 (272)
Q Consensus 157 ~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~ 190 (272)
.. |.+.+|..|..+....++++..+.
T Consensus 149 ~~--------f~~~~~~~~~~~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 149 KN--------YANIPDAEQLKLIEKLQAKQEQLT 174 (248)
T ss_dssp TT--------GGGSCHHHHHHHHHHHHHHHHHCC
T ss_pred HH--------HhcccchhHHHHHHHHHHHHHHcc
Confidence 22 677889999888888888877764
No 107
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=1.4e-17 Score=123.64 Aligned_cols=104 Identities=15% Similarity=0.346 Sum_probs=88.4
Q ss_pred CCeEEecccchhHHhhcCC-CcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCccc-----
Q 024107 142 ANVQIVVGKTFDDLVLNSH-KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVE----- 213 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~-~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~----- 213 (272)
..+..++.++|.+.+.... ++++|+||++||++|+.+.|.|.+++..+.+. ++.|+.+|++.+ ++ .++++.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT-GLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS-SCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCccCHHHHHHccCcccCCc
Confidence 3588999999999986554 49999999999999999999999999999743 699999999998 66 488998
Q ss_pred -CCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 214 -EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 214 -~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
++||+++|++|+.+. ++.|..+.+.|.+|+.+.
T Consensus 86 ~~~Pt~~~~~~G~~~~--~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAM--RRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SCSSEEEEESSSSEEE--EESCBCSSSCBCCCCCCH
T ss_pred CCCCEEEEEECCEEEE--EecCcCchHHHHHHHhcc
Confidence 999999998887654 788888877777776554
No 108
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.66 E-value=1.9e-16 Score=114.92 Aligned_cols=104 Identities=20% Similarity=0.476 Sum_probs=89.0
Q ss_pred CCCeEEecc-cchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCe
Q 024107 141 NANVQIVVG-KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPT 217 (272)
Q Consensus 141 ~~~v~~l~~-~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~ 217 (272)
...+..+++ ++|++.+ ..+++++|+||++||+.|+.+.+.+.+++..+.+. ++.++.+|++.+ ++. ++++.++|+
T Consensus 14 ~~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~~~~~~~~v~~~Pt 91 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQSQIAQEVGIRAMPT 91 (121)
T ss_dssp CCCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CcceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCHHHHHHcCCCcccE
Confidence 345677777 7788877 77889999999999999999999999999988752 399999999998 664 889999999
Q ss_pred EEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 218 LLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 218 l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+++|++|+... ++.|. +.+.|.+||++.+
T Consensus 92 ~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 92 FVFFKNGQKID--TVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEETTEEEE--EEESS-CHHHHHHHHHHHT
T ss_pred EEEEECCeEEe--eEcCC-CHHHHHHHHHHhh
Confidence 99999887653 68888 9999999999875
No 109
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.66 E-value=4.1e-16 Score=109.98 Aligned_cols=102 Identities=17% Similarity=0.169 Sum_probs=90.0
Q ss_pred eEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEE
Q 024107 16 VTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVT 94 (272)
Q Consensus 16 v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~ 94 (272)
+.++++++|.+...++++++|.||++| ++|+.+.|.|.++++.+.+++.|+.+|++.. ++++++||+.++ ||+ .
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~---~~~~~~~~v~~~-Pt~-~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDEN---PETTSQFGIMSI-PTL-I 76 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTC---HHHHHHTTCCSS-SEE-E
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCC---HHHHHHcCCccc-cEE-E
Confidence 578899999988888899999999999 9999999999999999998899999999998 899999999999 999 6
Q ss_pred EEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 95 AFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 95 ~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
++.++. ....+.|..+.+.+.+++.+.+
T Consensus 77 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGGR-PVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHTTTTT
T ss_pred EEeCCe-EEEEEecCCCHHHHHHHHHHHh
Confidence 775553 3444578899999999887654
No 110
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.65 E-value=5.4e-16 Score=110.91 Aligned_cols=102 Identities=14% Similarity=0.140 Sum_probs=90.8
Q ss_pred eEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEE
Q 024107 16 VTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVT 94 (272)
Q Consensus 16 v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~ 94 (272)
+.+++.++|.+.+ ++++++|.||++| ++|+.+.|.|.++++.+.+++.|+.||++.+ ++++++|||.++ ||+ .
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDEN---QETAGKYGVMSI-PTL-L 76 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTC---CSHHHHTTCCSB-SEE-E
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCC---HHHHHHcCCCcc-cEE-E
Confidence 5678999999988 8889999999999 9999999999999999988899999999998 899999999999 999 6
Q ss_pred EEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 95 AFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 95 ~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
++.++. ....+.|..+.+.+.+|+.+.+.
T Consensus 77 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 77 VLKDGE-VVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHHHTTSC
T ss_pred EEeCCE-EEEEEeCCCCHHHHHHHHHHHHH
Confidence 775543 34456899999999999998764
No 111
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.65 E-value=3.4e-16 Score=113.16 Aligned_cols=104 Identities=15% Similarity=0.294 Sum_probs=85.4
Q ss_pred CeEEe--cccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeE
Q 024107 143 NVQIV--VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTL 218 (272)
Q Consensus 143 ~v~~l--~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l 218 (272)
.+..+ +..+|.+.+..++++++|+||++||++|+.+.|.+.+++..+ . ++.|+.+|++.+ ++ .++++.++|++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~--~v~~~~vd~~~~~~~~~~~~i~~~Pt~ 80 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K--DVTFIKVDVDKNGNAADAYGVSSIPAL 80 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T--TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C--CeEEEEEECCCCHHHHHhcCCCCCCEE
Confidence 36667 457888777677899999999999999999999999999999 4 799999999998 66 48999999999
Q ss_pred EEEeC----CCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 219 LFYPA----GDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 219 ~~~~~----~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
++|++ |+.+. ++.|..+ +.|.+.|.++..++
T Consensus 81 ~~~~~~~~~G~~~~--~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 81 FFVKKEGNEIKTLD--QFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp EEEEEETTEEEEEE--EEESCCH-HHHHHHHHHHC---
T ss_pred EEEeCCCCcceEEE--eecCCCH-HHHHHHHHHhhhcc
Confidence 99987 65443 6788765 56999999887654
No 112
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.65 E-value=1.3e-15 Score=122.79 Aligned_cols=122 Identities=20% Similarity=0.416 Sum_probs=105.6
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccCCcceEEE-EEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhH
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSSPIKLQVY-VFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPF 79 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~~~~~~v~-fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l 79 (272)
++|.+||..++.|.|.++|++|+.++++.+.+.+++ |+++| ++|+++.+.|+++|+.+++++.|+.+|++...+ ..+
T Consensus 101 ~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~-~~~ 179 (227)
T 4f9z_D 101 TKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKEN-GKV 179 (227)
T ss_dssp HHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGG-HHH
T ss_pred HHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhH-HHH
Confidence 469999999999999999999999999888777655 55668 899999999999999999999999999975323 689
Q ss_pred HhhcCCC--CCCceEEEEEeCCcceeecCC-CCCChHHHHHHHHHHhcCc
Q 024107 80 LTLFGLE--ESKNTVVTAFDNKAISKFLLE-SDLTPSNIEEFCSRLLHGT 126 (272)
Q Consensus 80 ~~~~~i~--~~~P~i~~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~ 126 (272)
++.||+. .+ |++ ++++..+..+|.+. ++.+.++|.+|+.+++.|+
T Consensus 180 l~~fgl~~~~~-P~~-~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 180 ISFFKLKESQL-PAL-AIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp HHHTTCCGGGC-SEE-EEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred HHHcCCCcccC-CEE-EEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 9999999 66 999 88887665667664 7899999999999999884
No 113
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.65 E-value=1.8e-16 Score=113.07 Aligned_cols=101 Identities=20% Similarity=0.315 Sum_probs=84.7
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEEE
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLFY 221 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~ 221 (272)
+..++.++| +.+ ..+++++|+||++||++|+.+.|.+.+++..+. ++.++.+|++.+ ++. ++++.++|++++|
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 344677889 554 457899999999999999999999999998875 589999999988 664 8999999999999
Q ss_pred eCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 222 PAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
++|+.+. ++.|..+.+.|.+++....+.
T Consensus 80 ~~G~~v~--~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 RDGKVAK--VFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp ESSSEEE--EEESCCCHHHHHHHHHTC---
T ss_pred ECCEEEE--EEcCCCCHHHHHHHHHHHhhh
Confidence 8887654 789999999999999987553
No 114
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.65 E-value=8.4e-17 Score=120.02 Aligned_cols=106 Identities=15% Similarity=0.213 Sum_probs=77.0
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCC--ChhHHHhHHHHHHHHHHhcCCCceE--EEEEeCCCC-CCC-CCcccCCC
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPW--CVTCETTSKQIEKLAKHFKGLDNLV--IAKIDASAN-EHP-KLQVEEYP 216 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~--C~~c~~~~~~~~~~a~~~~~~~~v~--~~~id~~~~-~~~-~~~v~~~P 216 (272)
.+..++.++|++.+. .++.++|+|+++| |++|+.+.|.|.++++++ + ++. |+.||++.+ ++. +|+|.++|
T Consensus 18 ~~~~l~~~~f~~~i~-~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIK-RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHH-hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 367889999999874 4556888999877 999999999999999999 5 788 999999988 674 89999999
Q ss_pred eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCC
Q 024107 217 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 217 ~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
|+++|++|+... ++.|..+.+.|.+||++.++....
T Consensus 94 T~~~fk~G~~v~--~~~G~~~~~~l~~~i~~~l~~~~~ 129 (142)
T 2es7_A 94 ATLVFTDGKLRG--ALSGIHPWAELLTLMRSIVDTPAA 129 (142)
T ss_dssp EEEEESCC------CEESCCCHHHHHHHHHHHHC----
T ss_pred eEEEEeCCEEEE--EEeCCCCHHHHHHHHHHHhccccc
Confidence 999999888765 799999999999999999875543
No 115
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.65 E-value=2e-15 Score=123.50 Aligned_cols=136 Identities=24% Similarity=0.383 Sum_probs=103.9
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccCCcceEEEEEEcc------cchHHHHHHHHHHHHHhcCceEEEEEeCCCccc
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSSPIKLQVYVFAKA------DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDL 75 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~------~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~ 75 (272)
++|.+||..++.|+|.++|.+|+..++. +++.++.|+... ..++.+...+.++|++++ ++.|+.+|+.+.
T Consensus 104 ~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~-- 179 (250)
T 3ec3_A 104 SAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDY-- 179 (250)
T ss_dssp HHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTT--
T ss_pred HHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHH--
Confidence 4699999999999999999999988774 667887787543 234668899999999999 899999999988
Q ss_pred chhHHhhcCCCCCC-c-eEEEEEeCCcceeecCC-CCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCe
Q 024107 76 AKPFLTLFGLEESK-N-TVVTAFDNKAISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANV 144 (272)
Q Consensus 76 ~~~l~~~~~i~~~~-P-~i~~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v 144 (272)
...++.||+.... | .+ ++.+ ..+.+|.+. +..+.++|.+|+.+++.|+++++++|+|+|+.+.++|
T Consensus 180 -~~~l~~fgl~~~~~~p~~-~~~~-~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl~p~~kSepiPe~~~~pV 248 (250)
T 3ec3_A 180 -ATEVKDLGLSESGGDVNA-AILD-ESGKKFAMEPEEFDSDALREFVMAFKKGKLKPVIKSQPVPKNNKGAA 248 (250)
T ss_dssp -HHHHHHTTCSSCSCSCEE-EEEC-TTSCEEECCCCSCCHHHHHHHHHHHHTTCCCCCC-------------
T ss_pred -HHHHHHcCCCccCCCcEE-EEEc-CCCceecCCcccCCHHHHHHHHHHHHCCCccceeecCCCCCCCCCCC
Confidence 7889999998532 4 66 5665 446788886 6799999999999999999999999999999766555
No 116
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.65 E-value=5.9e-16 Score=110.63 Aligned_cols=103 Identities=20% Similarity=0.427 Sum_probs=87.4
Q ss_pred CCeEEe-cccchhHHhhc---CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCC
Q 024107 142 ANVQIV-VGKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEY 215 (272)
Q Consensus 142 ~~v~~l-~~~~~~~~v~~---~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~ 215 (272)
+.+..+ +.++|.+.+.. .+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+ ++ .++++.++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVAEEWNVEAM 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHHHHHHCSST
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHHHhCCCCcc
Confidence 356777 55889888864 47899999999999999999999999999986 599999999998 56 47899999
Q ss_pred CeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 216 PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 216 P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
|++++|++|+.+. ++.| .+.+.|.++|++.+.
T Consensus 81 Pt~~~~~~G~~~~--~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 81 PTFIFLKDGKLVD--KTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp TEEEEEETTEEEE--EEEC-CCTTHHHHHHHHHHH
T ss_pred cEEEEEeCCEEEE--EEec-CCHHHHHHHHHHhhc
Confidence 9999998887553 6778 588999999998763
No 117
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.65 E-value=6.8e-16 Score=109.39 Aligned_cols=104 Identities=17% Similarity=0.200 Sum_probs=92.0
Q ss_pred ceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 15 LVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
.+.+++.++|.+.+.++++++|+||++| ++|+.+.|.+.++++.+.+++.|+.+|++.+ ++++++|++.++ |++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~- 76 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDEN---PKTAMRYRVMSI-PTV- 76 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTC---HHHHHHTTCCSS-SEE-
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCC---HhHHHhCCCCcC-CEE-
Confidence 4678999999988888899999999999 9999999999999999998899999999998 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
.++.++. ....+.|..+.+.+.+|+.+.++
T Consensus 77 ~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 77 ILFKDGQ-PVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp EEEETTE-EEEEEESCCCHHHHHHHHHTTC-
T ss_pred EEEeCCc-EeeeEeCCCCHHHHHHHHHHHhh
Confidence 7775553 34455888999999999998764
No 118
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.64 E-value=1.8e-15 Score=113.75 Aligned_cols=106 Identities=15% Similarity=0.186 Sum_probs=95.5
Q ss_pred CceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 14 PLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 14 ~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
..+..++.++|.+.+..+++++|+||++| ++|+.+.|.|.++++.+.+++.|+.||++.+ ++++++|+|.++ ||+
T Consensus 38 ~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~~~-Pt~ 113 (148)
T 3p2a_A 38 GEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAE---PALSTRFRIRSI-PTI 113 (148)
T ss_dssp CCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-SEE
T ss_pred CCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCC---HHHHHHCCCCcc-CEE
Confidence 35888999999998888999999999999 9999999999999999988899999999999 899999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
.++.++. ....+.|..+.+.|.+|+.+.+..
T Consensus 114 -~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 114 -MLYRNGK-MIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp -EEEETTE-EEEEESSCCCHHHHHHHHHHHHHS
T ss_pred -EEEECCe-EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 7776554 344568999999999999998763
No 119
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.64 E-value=1.5e-15 Score=107.25 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=90.1
Q ss_pred CceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 14 PLVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 14 ~~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
+.+..++.++|.+.+ .++++++|+||++| ++|+.+.|.+.++++.+.+.+.|+.+|++.+ +.++++||+.++ |+
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt 77 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDN---PETPNAYQVRSI-PT 77 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC---CHHHHHTTCCSS-SE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCC---HHHHHhcCCCcc-CE
Confidence 457889999998754 67889999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
+ .++.++. ....+.|..+.+.+.+|+.+.
T Consensus 78 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 78 L-MLVRDGK-VIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHHT
T ss_pred E-EEEeCCE-EEEEecCCCCHHHHHHHHHhc
Confidence 9 7775553 344458889999999999874
No 120
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.64 E-value=1.2e-15 Score=110.34 Aligned_cols=107 Identities=19% Similarity=0.153 Sum_probs=93.7
Q ss_pred cCCCceEeeCccccccc-ccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 11 NKFPLVTKLTDINSASV-HSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 11 ~s~~~v~~l~~~~f~~~-~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
.+.+.+..++.++|.+. ..++++++|+||++| ++|+.+.|.|.++++.+.+++.|+.+|++.. ++++++|+|.++
T Consensus 10 ~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~---~~l~~~~~v~~~ 86 (119)
T 1w4v_A 10 HGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDH---TDLAIEYEVSAV 86 (119)
T ss_dssp CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTT---HHHHHHTTCCSS
T ss_pred CCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCC---HHHHHHcCCCcc
Confidence 45678899999999884 467789999999999 9999999999999999988899999999998 899999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
||+ .++.++. ....+.|..+.+.|.+|+.+.+
T Consensus 87 -Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 87 -PTV-LAMKNGD-VVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp -SEE-EEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred -cEE-EEEeCCc-EEEEEcCCCCHHHHHHHHHHHh
Confidence 999 7775543 3445578899999999999875
No 121
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.64 E-value=7.8e-16 Score=110.85 Aligned_cols=103 Identities=24% Similarity=0.434 Sum_probs=87.9
Q ss_pred CeEEec-ccchhHHhhc---CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCC
Q 024107 143 NVQIVV-GKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYP 216 (272)
Q Consensus 143 ~v~~l~-~~~~~~~v~~---~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P 216 (272)
.+..++ .++|++.+.. .+++++|+||++||++|+.+.|.+.+++..+. ++.++.+|++.+ ++ .++++.++|
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~P 83 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVAEAYNVEAMP 83 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSBS
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHHHHcCCCcCc
Confidence 466674 5889888754 47899999999999999999999999999986 599999999998 66 489999999
Q ss_pred eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 217 TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 217 ~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
++++|++|+... ++.| .+.+.|.++|.+.++.
T Consensus 84 t~~~~~~g~~~~--~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 84 TFLFIKDGEKVD--SVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEEEETTEEEE--EEES-CCHHHHHHHHHHHHC-
T ss_pred EEEEEeCCeEEE--EecC-CCHHHHHHHHHHHhcc
Confidence 999998887653 6778 5889999999998764
No 122
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.64 E-value=2.2e-15 Score=107.85 Aligned_cols=105 Identities=12% Similarity=0.132 Sum_probs=92.5
Q ss_pred CceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 14 PLVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 14 ~~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
+.+..++.++|.+.+ ..+++++|+||++| ++|+.+.|.|.++++.+.+++.|+.+|++.. ++++++|||.++ |+
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~---~~~~~~~~v~~~-Pt 82 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPN---PTTVKKYKVEGV-PA 82 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTC---HHHHHHTTCCSS-SE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCC---HHHHHHcCCCce-eE
Confidence 458889999998754 67889999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+ .++.++. ....+.|..+.+.+.+|+.+.++
T Consensus 83 ~-~~~~~G~-~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 83 L-RLVKGEQ-ILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHHHHHHC
T ss_pred E-EEEcCCE-EEEEecCCCCHHHHHHHHHHHhc
Confidence 9 6775543 34455889999999999999875
No 123
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.45 E-value=1.3e-17 Score=117.75 Aligned_cols=102 Identities=27% Similarity=0.595 Sum_probs=89.9
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEE
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFY 221 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~ 221 (272)
+..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+ ++ .++++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 567888999988777789999999999999999999999999999987 799999999988 56 48899999999999
Q ss_pred eCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 222 PAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
++|+... ++.|..+.+.|.+||++.+
T Consensus 81 ~~g~~~~--~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 81 KNGQVVD--RLVGAQPKEALKERIDKHL 106 (106)
Confidence 8777654 7889999999999998653
No 124
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.64 E-value=1e-15 Score=107.37 Aligned_cols=102 Identities=19% Similarity=0.161 Sum_probs=90.9
Q ss_pred eEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEE
Q 024107 16 VTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVT 94 (272)
Q Consensus 16 v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~ 94 (272)
|.+++.++|.+.+.++++++|+||++| ++|+.+.|.+.++++.+.+ +.|+.+|++.. ++++++|++.++ ||+ .
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~---~~~~~~~~v~~~-Pt~-~ 74 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDEN---PDIAARYGVMSL-PTV-I 74 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSS-CEE-E
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCC---HHHHHhCCcccc-CEE-E
Confidence 467899999998888899999999999 9999999999999999988 99999999998 899999999999 999 7
Q ss_pred EEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 95 AFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 95 ~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
++.++. ....+.|..+.+.+.+|+.+.++
T Consensus 75 ~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 75 FFKDGE-PVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEECCe-EhhhccCCCCHHHHHHHHHHHhc
Confidence 776553 33455888999999999998764
No 125
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.64 E-value=9.9e-16 Score=116.12 Aligned_cols=105 Identities=11% Similarity=0.113 Sum_probs=93.1
Q ss_pred ceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 15 LVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
.+.++++.+|.+.+.++++++|+||++| ++|+.+.|.|.++++.+.+++.|+.||++.+ ++++++|||.++ ||+
T Consensus 48 ~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~---~~l~~~~~i~~~-Pt~- 122 (155)
T 2ppt_A 48 KVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAH---PAVAGRHRIQGI-PAF- 122 (155)
T ss_dssp SEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTS---THHHHHTTCCSS-SEE-
T ss_pred CCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCcc---HHHHHHcCCCcC-CEE-
Confidence 3678899999998878889999999999 9999999999999999998899999999998 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
.++.++. ....+.|..+.+.|.+|+.+.++.
T Consensus 123 ~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 123 ILFHKGR-ELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEETTE-EEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCCe-EEEEecCCCCHHHHHHHHHHHhcc
Confidence 7776554 344458899999999999998753
No 126
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.64 E-value=1.3e-15 Score=113.48 Aligned_cols=107 Identities=17% Similarity=0.188 Sum_probs=91.8
Q ss_pred CCCceEeeCccccccccc------------CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchh
Q 024107 12 KFPLVTKLTDINSASVHS------------SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKP 78 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~------------~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~ 78 (272)
..+.+..++.++|...+. ++++++|.||++| ++|+.+.|.|.++++.+.+++.|+.||++.. ++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~ 96 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKE---PE 96 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCC---HH
Confidence 445688899999988665 3789999999999 9999999999999999998899999999999 89
Q ss_pred HHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 79 FLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 79 l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
++++|||.++ ||+ .+++.++.. ..+.|..+.+.|.+|+.+.+.
T Consensus 97 ~~~~~~v~~~-Pt~-~~~~~~g~~-~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 97 LARDFGIQSI-PTI-WFVPMKGEP-QVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHHTTCCSS-SEE-EEECSSSCC-EEEESCCCHHHHHHHHHHTTC
T ss_pred HHHHcCCCCc-CEE-EEEeCCCCE-EEEeCCCCHHHHHHHHHHHHc
Confidence 9999999999 999 788544322 245899999999999999764
No 127
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.64 E-value=1.2e-15 Score=113.46 Aligned_cols=106 Identities=18% Similarity=0.358 Sum_probs=89.9
Q ss_pred CCCeEEec-ccchhHHhh---cCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccC
Q 024107 141 NANVQIVV-GKTFDDLVL---NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEE 214 (272)
Q Consensus 141 ~~~v~~l~-~~~~~~~v~---~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~ 214 (272)
...+..++ .++|.+.+. ..+++++|+||++||++|+.+.|.+.+++..+. ++.|+.+|++.+ ++ .++++.+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 99 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSASWEIKA 99 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCE
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHHcCCCc
Confidence 44566675 588988874 248899999999999999999999999999985 699999999998 66 4899999
Q ss_pred CCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 215 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 215 ~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
+|++++|++|+... ++.|. +.+.|.++|.+.++..
T Consensus 100 ~Pt~~~~~~G~~~~--~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 100 TPTFFFLRDGQQVD--KLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp ESEEEEEETTEEEE--EEESC-CHHHHHHHHHHHHHTS
T ss_pred ccEEEEEcCCeEEE--EEeCC-CHHHHHHHHHHHhccC
Confidence 99999998887653 68888 8899999999988643
No 128
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.64 E-value=6.6e-16 Score=111.23 Aligned_cols=104 Identities=11% Similarity=0.074 Sum_probs=90.0
Q ss_pred CCCceEeeCccccccccc--CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 12 KFPLVTKLTDINSASVHS--SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~--~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
+.+.....+.++|++.+. ++++++|.||++| ++|+++.|.|.++++.+.+ +.|+.||++.. ++++++|||.++
T Consensus 10 ~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~---~~l~~~~~v~~~ 85 (116)
T 3qfa_C 10 HGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDC---QDVASECEVKSM 85 (116)
T ss_dssp --CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTT---HHHHHHTTCCSS
T ss_pred CCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCC---HHHHHHcCCccc
Confidence 456777889999999887 7899999999999 9999999999999999988 99999999999 899999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
||+ .++.++. ....+.|. +.+.|.+++.+.+
T Consensus 86 -Pt~-~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 86 -PTF-QFFKKGQ-KVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp -SEE-EEESSSS-EEEEEESC-CHHHHHHHHHHHC
T ss_pred -cEE-EEEeCCe-EEEEEcCC-CHHHHHHHHHHhC
Confidence 999 7776554 33445777 9999999998763
No 129
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.64 E-value=1.1e-16 Score=118.64 Aligned_cols=104 Identities=23% Similarity=0.315 Sum_probs=86.9
Q ss_pred CCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeC---------CCC-CCC-C
Q 024107 141 NANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDA---------SAN-EHP-K 209 (272)
Q Consensus 141 ~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~---------~~~-~~~-~ 209 (272)
.+.+..++.++|.+.+.. +++|+||++||++|+.+.|.+.++++.+. +.|+.+|+ +.+ ++. +
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 346888999999998743 99999999999999999999999998874 78899999 444 443 7
Q ss_pred CcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 210 LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 210 ~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
++|.++||+++|++|+.+. ++.|..+.+.+.+++++.++...
T Consensus 88 ~~v~~~Pt~~~~~~G~~v~--~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 88 AGVEGTPTLVFYKEGRIVD--KLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp HTCCSSSEEEEEETTEEEE--EEESCCCHHHHHHHHHHHC----
T ss_pred cCCceeCeEEEEcCCEEEE--EEeCCCCHHHHHHHHHHHhCCCc
Confidence 8999999999999887654 79999999999999999887543
No 130
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.63 E-value=1.7e-15 Score=111.07 Aligned_cols=103 Identities=20% Similarity=0.262 Sum_probs=90.7
Q ss_pred ceEeeCcccccc-cccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 15 LVTKLTDINSAS-VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 15 ~v~~l~~~~f~~-~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
.+..++.++|.+ +..++++++|.||++| ++|+++.|.|.++++.+.+++.|+.||++.. ++++++|+|.++ ||+
T Consensus 23 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt~ 98 (128)
T 2o8v_B 23 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYGIRGI-PTL 98 (128)
T ss_dssp CSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTC---CTTSGGGTCCSS-SEE
T ss_pred ccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC---HHHHHHcCCCcc-CEE
Confidence 478899999986 4577889999999999 9999999999999999998899999999998 799999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
.++.++. ....+.|..+.+.|.+|+.+.+
T Consensus 99 -~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 99 -LLFKNGE-VAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp -EEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred -EEEeCCE-EEEEEcCCCCHHHHHHHHHHhh
Confidence 6775543 3445688999999999999875
No 131
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1.7e-15 Score=110.64 Aligned_cols=107 Identities=14% Similarity=0.079 Sum_probs=92.7
Q ss_pred CCCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 12 KFPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
..+.+..++.++|++.+... ++|.||++| ++|+++.|.|.++++.+.+ .+.|+.||++.+ .+++++|+|.++
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~--vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~~- 78 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ---PGLSGRFIINAL- 78 (126)
T ss_dssp CCCSEEECCTTTHHHHTSSE--EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC---HHHHHHTTCCSS-
T ss_pred CCCccEEecHHHHHHHhCCC--EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC---HHHHHHcCCccc-
Confidence 34568899999999877554 899999999 9999999999999999985 699999999998 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCcc
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTL 127 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 127 (272)
||+ .++.++. ...+.|..+.+.|.+|+.+.+...+
T Consensus 79 Pt~-~~~~~G~--~~~~~G~~~~~~l~~~l~~~~~~~~ 113 (126)
T 1x5e_A 79 PTI-YHCKDGE--FRRYQGPRTKKDFINFISDKEWKSI 113 (126)
T ss_dssp SEE-EEEETTE--EEECCSCCCHHHHHHHHHTCGGGGS
T ss_pred CEE-EEEeCCe--EEEeecCCCHHHHHHHHHHHhhccC
Confidence 999 7776554 3566899999999999999875443
No 132
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=1.6e-15 Score=111.77 Aligned_cols=110 Identities=9% Similarity=0.081 Sum_probs=94.5
Q ss_pred cCCCceEeeCccccccccc-CCcceEEEEEEcc-cchHHHHHHHHHHHHHhc--CceEEEEEeCCCcccchhHHhhcCCC
Q 024107 11 NKFPLVTKLTDINSASVHS-SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIADEDLAKPFLTLFGLE 86 (272)
Q Consensus 11 ~s~~~v~~l~~~~f~~~~~-~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~--~~i~~~~vd~~~~~~~~~l~~~~~i~ 86 (272)
...+.|..++.++|...+. ++++++|+||++| ++|+.+.|.|.++++.+. +.+.|+.|||+.+ ..++++|+|.
T Consensus 4 ~~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~ 80 (133)
T 2dj3_A 4 GSSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN---DITNDQYKVE 80 (133)
T ss_dssp CSSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS---CCCCSSCCCS
T ss_pred cCCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC---HHHHhhcCCC
Confidence 3456789999999999775 4789999999999 999999999999999998 4699999999988 7899999999
Q ss_pred CCCceEEEEEeCCcc-eeecCC-CCCChHHHHHHHHHHhcC
Q 024107 87 ESKNTVVTAFDNKAI-SKFLLE-SDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 87 ~~~P~i~~~~~~~~~-~~~~~~-g~~~~~~i~~fi~~~~~~ 125 (272)
++ ||+ .++++++. ....+. |.++.+.|.+|+.+.+..
T Consensus 81 ~~-Pt~-~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 81 GF-PTI-YFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp SS-SEE-EEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred cC-CEE-EEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 99 999 78876543 333456 569999999999998764
No 133
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.63 E-value=7.8e-16 Score=111.67 Aligned_cols=105 Identities=17% Similarity=0.111 Sum_probs=90.3
Q ss_pred CceEeeCcccccc-cccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 14 PLVTKLTDINSAS-VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 14 ~~v~~l~~~~f~~-~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
+.+..++.++|.+ +..++++++|.||++| ++|+.+.|.|.++++.+.+.+.|+.||++.. ++++++|+|.++ ||
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-Pt 78 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAY---PQTCQKAGIKAY-PS 78 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCC---HHHHHHcCCCcc-ce
Confidence 3578899999954 6678889999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCC----CCChHHHHHHHHHHhc
Q 024107 92 VVTAFDNKAISKFLLES----DLTPSNIEEFCSRLLH 124 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~~ 124 (272)
+ .+++.++. ...+.| ..+.+.|.+|+.+.+.
T Consensus 79 ~-~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 79 V-KLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp E-EEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred E-EEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHH
Confidence 9 77765433 222344 4899999999999875
No 134
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.63 E-value=3.1e-15 Score=108.25 Aligned_cols=105 Identities=12% Similarity=0.130 Sum_probs=90.8
Q ss_pred CCCceEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC-----ceEEEEEeCCCcccchhHHhhcC
Q 024107 12 KFPLVTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG-----KIMFTAVDIADEDLAKPFLTLFG 84 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-----~i~~~~vd~~~~~~~~~l~~~~~ 84 (272)
..+.+..++.++|.+.+ .++++++|+||++| ++|+++.|.|.++++.+.+ .+.|+.|||+.+ .+++ +
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~----~~~~--~ 78 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN----DVPD--E 78 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS----CCSS--C
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc----cccc--c
Confidence 34568889999999975 77889999999999 9999999999999999987 799999999988 3666 9
Q ss_pred CCCCCceEEEEEeCCcc-eeecCCCCCChHHHHHHHHHHhc
Q 024107 85 LEESKNTVVTAFDNKAI-SKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~-~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
|.++ ||+ .++++++. ....+.|.++.+.|.+|+.+.++
T Consensus 79 v~~~-Pt~-~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 79 IQGF-PTI-KLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp CSSS-SEE-EEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred cCcC-CeE-EEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 9999 999 88876643 25566899999999999999764
No 135
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.63 E-value=2.8e-15 Score=106.03 Aligned_cols=102 Identities=14% Similarity=0.206 Sum_probs=89.7
Q ss_pred eEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 16 VTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 16 v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
+..+++++|.+.+ .++++++|.||++| ++|+.+.|.+.++++.+.+++.|+.+|++.. ++++++||+.++ ||+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~- 77 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDES---PNVASEYGIRSI-PTI- 77 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHHTCCSS-CEE-
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCC---HHHHHHCCCCcC-CEE-
Confidence 5678999998854 67789999999999 9999999999999999998899999999998 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
.++.++. ....+.|..+.+.+.+++.+++
T Consensus 78 ~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 78 MVFKGGK-KCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EEESSSS-EEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEeCCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 7776543 3445588999999999999875
No 136
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.63 E-value=3.7e-15 Score=106.31 Aligned_cols=105 Identities=14% Similarity=0.155 Sum_probs=91.8
Q ss_pred CceEeeCcccccc-cccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 14 PLVTKLTDINSAS-VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 14 ~~v~~l~~~~f~~-~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
..+..++.++|.+ +..++++++|.||++| ++|+.+.|.|.++++.+.+.+.|+.+|++.. ++++++|||.++ ||
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt 80 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDEN---PGTAAKYGVMSI-PT 80 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCC---HHHHHhCCCCcc-cE
Confidence 4578899999976 4467789999999999 9999999999999999988899999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+ .++.++. ....+.|..+.+.+.+|+.+.++
T Consensus 81 ~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 81 L-NVYQGGE-VAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp E-EEEETTE-EEEEEESCCCHHHHHHHTHHHHC
T ss_pred E-EEEeCCE-EEEEEeCCCCHHHHHHHHHHHhh
Confidence 9 7776553 34456889999999999998764
No 137
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.62 E-value=2.9e-15 Score=110.91 Aligned_cols=106 Identities=15% Similarity=0.200 Sum_probs=92.2
Q ss_pred CCceEeeCccccccccc------------CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhH
Q 024107 13 FPLVTKLTDINSASVHS------------SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPF 79 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~------------~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l 79 (272)
...+..+++++|.+.+. ++++++|+||++| ++|+++.|.|.++++.+.+++.|+.||++.. +++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~---~~l 84 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKE---QEL 84 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCC---HHH
Confidence 34688899999988664 4689999999999 9999999999999999998899999999998 899
Q ss_pred HhhcCCCCCCceEEEEEe-CCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 80 LTLFGLEESKNTVVTAFD-NKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 80 ~~~~~i~~~~P~i~~~~~-~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+++|||.++ ||+ .+++ ++... .+.|..+.+.|.+|+.+.+..
T Consensus 85 ~~~~~v~~~-Pt~-~~~~~~G~~~--~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 85 AGAFGIRSI-PSI-LFIPMEGKPE--MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HHHTTCCSS-CEE-EEECSSSCCE--EEESCCCHHHHHHHHHHHHTS
T ss_pred HHHcCCCCC-CEE-EEECCCCcEE--EEeCCCCHHHHHHHHHHHhhc
Confidence 999999999 999 7884 44333 457899999999999998754
No 138
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.62 E-value=1.6e-15 Score=107.10 Aligned_cols=97 Identities=11% Similarity=0.074 Sum_probs=74.9
Q ss_pred CcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeC
Q 024107 20 TDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDN 98 (272)
Q Consensus 20 ~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~ 98 (272)
+.++|++.+.++++++|.||++| ++|+.+.|.+.++++.+. .+.|+.||++.. ++++++|||.++ ||+ .++.+
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~---~~l~~~~~v~~~-Pt~-~~~~~ 80 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDM---QEIAGRYAVFTG-PTV-LLFYN 80 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------CCC-CEE-EEEET
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCC---HHHHHhcCCCCC-CEE-EEEeC
Confidence 66789888888999999999999 999999999999999995 599999999999 899999999999 999 77775
Q ss_pred CcceeecCCCCCChHHHHHHHHHHh
Q 024107 99 KAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 99 ~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
|. ....+.|..+.+.|.+++.+++
T Consensus 81 G~-~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 81 GK-EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp TE-EEEEEESSCCHHHHHHHHHTTC
T ss_pred Ce-EEEEEeCCcCHHHHHHHHHHhh
Confidence 53 3444578899999999998764
No 139
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.62 E-value=2.6e-15 Score=121.25 Aligned_cols=102 Identities=25% Similarity=0.403 Sum_probs=88.1
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEEC--CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-----C-CCC-CCccc
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYT--PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----N-EHP-KLQVE 213 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~--~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-----~-~~~-~~~v~ 213 (272)
.+..++..+|++.+ ..+++++|.||+ |||+ +.|.|.++|..+.+.+++.|+.||++. + +++ +++|.
T Consensus 6 ~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 6 GALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 57889999999966 667899999999 9999 999999999999764479999999553 5 554 89999
Q ss_pred --CCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 214 --EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 214 --~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
++||+++|++|+...+.+|.|..+.+.|.+||++++
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999999999997212568999999999999999985
No 140
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.62 E-value=3.5e-15 Score=106.13 Aligned_cols=103 Identities=14% Similarity=0.094 Sum_probs=89.7
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhc---CceEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK---GKIMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~---~~i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
.+.+..+++++|++.+. +++++|.||++| ++|+.+.|.|.++++.+. +.+.|+.+|++.. ++++++|+|.++
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~~~ 79 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE---RNICSKYSVRGY 79 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC---HHHHHHTTCCSS
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc---HhHHHhcCCCcc
Confidence 34688999999999887 669999999999 999999999999999986 3599999999998 899999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
||+ .++.+++ ....+.|..+.+.|.+|+.+.
T Consensus 80 -Pt~-~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 -PTL-LLFRGGK-KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp -SEE-EEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred -cEE-EEEeCCc-EEEeccCCcCHHHHHHHHHhc
Confidence 999 7776554 344568999999999999873
No 141
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.61 E-value=1.2e-15 Score=110.03 Aligned_cols=107 Identities=19% Similarity=0.171 Sum_probs=93.6
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC---ceEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG---KIMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~---~i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
.+.+..++.++|.+.+.++++++|+||++| ++|+++.|.|.++++.+.+ .+.|+.+||+.+ +.++++|||.++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~~ 82 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE---SDLAQQYGVRGY 82 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC---CSSHHHHTCCSS
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC---HHHHHHCCCCcc
Confidence 346889999999999888899999999999 9999999999999999873 599999999998 799999999999
Q ss_pred CceEEEEEeCCcce-eecCCCCCChHHHHHHHHHHhc
Q 024107 89 KNTVVTAFDNKAIS-KFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 89 ~P~i~~~~~~~~~~-~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
||+ .++.+++.. ...+.|..+.+.|.+|+.+.++
T Consensus 83 -Pt~-~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 83 -PTI-KFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp -SEE-EEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred -cEE-EEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 999 777655432 2556899999999999998764
No 142
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.61 E-value=2.6e-15 Score=109.80 Aligned_cols=103 Identities=12% Similarity=0.145 Sum_probs=90.6
Q ss_pred eEeeCcccccccccCCc-ceEEEEEEcc---cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 16 VTKLTDINSASVHSSPI-KLQVYVFAKA---DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 16 v~~l~~~~f~~~~~~~~-~~~v~fy~~~---~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
+.++|+++|++.+.++. +++|.||++| ++|+.+.|++.++++.|.+++.|++||.+++ ++++.+|||.+. ||
T Consensus 17 ~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~---~~la~~ygV~si-PT 92 (137)
T 2qsi_A 17 PTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAE---RGLMARFGVAVC-PS 92 (137)
T ss_dssp CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGH---HHHHHHHTCCSS-SE
T ss_pred CcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCC---HHHHHHcCCccC-CE
Confidence 34789999999775554 9999999977 7999999999999999999999999999999 999999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+ ++|.+|+. .-...|..+.+.|.+++.+.+.
T Consensus 93 l-ilFkdG~~-v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 93 L-AVVQPERT-LGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp E-EEEECCEE-EEEEESCCCHHHHHHHHHHHHH
T ss_pred E-EEEECCEE-EEEEeCCCCHHHHHHHHHHHhc
Confidence 9 88887753 3334788999999999998873
No 143
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.61 E-value=4.9e-15 Score=104.28 Aligned_cols=101 Identities=17% Similarity=0.240 Sum_probs=88.5
Q ss_pred eEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 16 VTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 16 v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
|..++.++|.+.+ .++++++|+||++| ++|+.+.|.+.++++.+.+++.|+.+|++.. ++++++||+.++ ||+
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~- 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEA---PGIATQYNIRSI-PTV- 76 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-SEE-
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcch---HHHHHhCCCCcc-cEE-
Confidence 5678999999854 56789999999999 9999999999999999998899999999998 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
.++.++. ....+.|..+.+.+.+++.++
T Consensus 77 ~~~~~g~-~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 77 LFFKNGE-RKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp EEEETTE-EEEEEEECCCHHHHHHHHHHH
T ss_pred EEEeCCe-EEEEEecCCCHHHHHHHHHhh
Confidence 7776553 344457889999999999875
No 144
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.61 E-value=1.6e-16 Score=114.72 Aligned_cols=99 Identities=8% Similarity=0.216 Sum_probs=79.5
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----CC-CCCcccCCC
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----EH-PKLQVEEYP 216 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----~~-~~~~v~~~P 216 (272)
.+..++.++|.+.+ ..+++++|+||++||++|+.+.|.+.+++..+.. .+.++.++...+ ++ .+++|.++|
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~i~~~P 89 (118)
T 1zma_A 13 DLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPSQLNDLQAFRSRYGIPTVP 89 (118)
T ss_dssp TSEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETTCGGGHHHHHHHHHHHTCCSSC
T ss_pred hhhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECCCcCcHHHHHHHHHHcCCCCCC
Confidence 36778889999876 5578999999999999999999999999998864 555543332221 22 367999999
Q ss_pred eEEEEeCCCCcCceEeeCCCCHHHHHHHHH
Q 024107 217 TLLFYPAGDKANPIKVSARSSSKNIAAFIK 246 (272)
Q Consensus 217 ~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~ 246 (272)
++++|++|+.+. ++.|..+.+.|.+||+
T Consensus 90 t~~~~~~G~~~~--~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 90 GFVHITDGQINV--RCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEEETTEEEE--ECCTTCCHHHHHHHHT
T ss_pred eEEEEECCEEEE--EecCCCCHHHHHHHhh
Confidence 999999887653 7899999999999985
No 145
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.61 E-value=1.2e-15 Score=112.69 Aligned_cols=107 Identities=11% Similarity=0.269 Sum_probs=86.6
Q ss_pred CCCCeEEecc-cchhHHhhcC-CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCC
Q 024107 140 TNANVQIVVG-KTFDDLVLNS-HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEY 215 (272)
Q Consensus 140 ~~~~v~~l~~-~~~~~~v~~~-~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~ 215 (272)
....+..+++ ++|.+.+... +++++|+||++||++|+.+.|.+.+++..+ ++.++.+|++.+ ++. +++|.++
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~~~v~~~ 93 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQHNIKAL 93 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHhcCCCCC
Confidence 3446778876 7788776543 579999999999999999999999988776 489999999998 664 8999999
Q ss_pred CeEEEEe--CCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 216 PTLLFYP--AGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 216 P~l~~~~--~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
|++++|+ +|+.....++.|. +.+.|.++|++.+..
T Consensus 94 Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 94 PTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp SEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred CEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 9999996 7762112267887 899999999998764
No 146
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.61 E-value=5.3e-15 Score=110.02 Aligned_cols=106 Identities=19% Similarity=0.220 Sum_probs=79.3
Q ss_pred CceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 14 PLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 14 ~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
+.+.+++.++|.+.+..+..++|+||++| ++|+.+.|.|.++++.+.+++.|+.||++.+ ++++++|+|.++ ||+
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt~ 108 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEH---PGLAARYGVRSV-PTL 108 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC---HHHHHHTTCCSS-SEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCC---HHHHHHCCCCcc-CEE
Confidence 56788999999987655444999999999 9999999999999999997899999999998 899999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
.++.++. ....+.|..+.+.+.+|+.+.+.+
T Consensus 109 -~~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 109 -VLFRRGA-PVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp -EEEETTE-EEEEEESCCCHHHHHHHHHHHHTC
T ss_pred -EEEeCCc-EEEEEeCCCCHHHHHHHHHHHHcc
Confidence 7776554 344458899999999999998865
No 147
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.61 E-value=3.7e-15 Score=112.69 Aligned_cols=129 Identities=11% Similarity=0.082 Sum_probs=93.9
Q ss_pred cCCCceEeeC-cccccccccC--CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCC
Q 024107 11 NKFPLVTKLT-DINSASVHSS--PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLE 86 (272)
Q Consensus 11 ~s~~~v~~l~-~~~f~~~~~~--~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~ 86 (272)
.+...+..++ .++|.+.+.. +++++|.||++| ++|+++.|.|.++++.+. .+.|+.||++.. ++++++|||.
T Consensus 9 ~~~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~---~~l~~~~~v~ 84 (153)
T 2wz9_A 9 AAVAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGV---PEVSEKYEIS 84 (153)
T ss_dssp ---CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTS---HHHHHHTTCC
T ss_pred cccCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCC---HHHHHHcCCC
Confidence 3455677776 5889988876 889999999999 999999999999999985 499999999998 8999999999
Q ss_pred CCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhh
Q 024107 87 ESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVL 157 (272)
Q Consensus 87 ~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~ 157 (272)
++ ||+ .+++++. ....+.| .+.+.|.+|+.+.++.... ..+..+..++..+|+++..
T Consensus 85 ~~-Pt~-~~~~~G~-~~~~~~G-~~~~~l~~~i~~~l~~~~~----------~~~~~~~~l~~~~f~~~~~ 141 (153)
T 2wz9_A 85 SV-PTF-LFFKNSQ-KIDRLDG-AHAPELTKKVQRHASSGSF----------LPSAKVKVDTDPNSSSVDK 141 (153)
T ss_dssp SS-SEE-EEEETTE-EEEEEES-SCHHHHHHHHHHHSCTTSS----------CSCCCCCCC----------
T ss_pred CC-CEE-EEEECCE-EEEEEeC-CCHHHHHHHHHHHhccccC----------CCccccccCCCCChhhHHH
Confidence 99 999 7887543 3333456 5788999999998764321 1233566678888888653
No 148
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.60 E-value=2.6e-15 Score=111.62 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=88.5
Q ss_pred eEeeC-cccccccc--cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 16 VTKLT-DINSASVH--SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 16 v~~l~-~~~f~~~~--~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
+..++ .++|++.+ ++.++++|.||++| ++|+.+.|.++++|+++.+++.|+.||.++. ++++++|+|.+. ||
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~---~e~a~~y~V~si-PT 98 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEV---PDFNTMYELYDP-VS 98 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTC---CTTTTTTTCCSS-EE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCC---HHHHHHcCCCCC-CE
Confidence 44554 47788765 46789999999999 9999999999999999998899999999999 899999999999 99
Q ss_pred EEEEEeCCccee-e-------cCCCCCC-hHHHHHHHHHHhcCc
Q 024107 92 VVTAFDNKAISK-F-------LLESDLT-PSNIEEFCSRLLHGT 126 (272)
Q Consensus 92 i~~~~~~~~~~~-~-------~~~g~~~-~~~i~~fi~~~~~~~ 126 (272)
+ ++|.+++... - ...|... .+.|.+++..++.|-
T Consensus 99 ~-~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a 141 (160)
T 2av4_A 99 V-MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGA 141 (160)
T ss_dssp E-EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHH
T ss_pred E-EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHh
Confidence 9 7777665431 2 4577766 899999999887653
No 149
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.60 E-value=4.7e-15 Score=120.29 Aligned_cols=116 Identities=17% Similarity=0.172 Sum_probs=101.6
Q ss_pred hhHHHHHhhcCCC-------ceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc---eEEEEEeC
Q 024107 2 DKILQFLNYNKFP-------LVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK---IMFTAVDI 70 (272)
Q Consensus 2 ~~l~~fi~~~s~~-------~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~---i~~~~vd~ 70 (272)
++|.+|+.....+ .+..++.++|.+.+..+++++|.||++| ++|+.+.|.|.++|+.+.+. +.|+.||+
T Consensus 111 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~ 190 (241)
T 3idv_A 111 EEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDA 190 (241)
T ss_dssp HHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEET
T ss_pred HHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEEC
Confidence 4577888775444 5788999999999988889999999999 99999999999999999764 99999999
Q ss_pred CCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 71 ADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 71 ~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+.. +++|++|||.++ ||+ .++.+++ ...|.|.++.+.|.+|+.+.+.
T Consensus 191 ~~~---~~l~~~~~v~~~-Pt~-~~~~~g~--~~~~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 191 TAE---TDLAKRFDVSGY-PTL-KIFRKGR--PYDYNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp TTC---HHHHHHTTCCSS-SEE-EEEETTE--EEECCSCCSHHHHHHHHHHHTT
T ss_pred CCC---HHHHHHcCCccc-CEE-EEEECCe--EEEecCCCCHHHHHHHHHhhhC
Confidence 999 899999999999 999 7888664 3346999999999999999864
No 150
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.59 E-value=8.1e-15 Score=131.31 Aligned_cols=114 Identities=18% Similarity=0.310 Sum_probs=96.8
Q ss_pred CCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCC-CceEEEEEeCCC--C-CCC-CCcccC
Q 024107 140 TNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDASA--N-EHP-KLQVEE 214 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~-~~v~~~~id~~~--~-~~~-~~~v~~ 214 (272)
....|..++.++|++.+.+++++++|+|||+||++|+.+.|.|.++++.+.+. ..+.|+.||++. + +++ +++|.+
T Consensus 10 ~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 10 SSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 34579999999999998888899999999999999999999999999999862 269999999975 4 554 899999
Q ss_pred CCeEEEEeCCCCcC--ceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 215 YPTLLFYPAGDKAN--PIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 215 ~P~l~~~~~~~~~~--~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
+|++++|++|++.. ...+.|..+.+.|.++|.+.+....
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 99999999755421 2357788999999999999987654
No 151
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.59 E-value=6.7e-15 Score=117.19 Aligned_cols=108 Identities=14% Similarity=0.203 Sum_probs=96.4
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
.+.+..++.++|...+.++++++|.||++| ++|+.+.|.|.++++.+.+.+.|+.|||+.. +.+|++|||.++ ||
T Consensus 96 ~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~v~~~-Pt 171 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDD---RMLCRMKGVNSY-PS 171 (210)
T ss_dssp CTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred CCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCcc---HHHHHHcCCCcC-Ce
Confidence 456788999999998888899999999999 9999999999999999998899999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 126 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 126 (272)
+ .++.++. ....+.|..+.+.|.+|+.+.++..
T Consensus 172 ~-~~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 172 L-FIFRSGM-AAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp E-EEECTTS-CCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred E-EEEECCC-ceeEecCCCCHHHHHHHHHHhCccc
Confidence 9 7775554 3455689999999999999998654
No 152
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.59 E-value=1.4e-15 Score=110.79 Aligned_cols=104 Identities=20% Similarity=0.256 Sum_probs=83.7
Q ss_pred CceEeeCcccccc-cccCCcceEEEEEEcc-c--------------chHHHHHHHHHHHHHhcCceEEEEEeCCCcccch
Q 024107 14 PLVTKLTDINSAS-VHSSPIKLQVYVFAKA-D--------------DLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAK 77 (272)
Q Consensus 14 ~~v~~l~~~~f~~-~~~~~~~~~v~fy~~~-~--------------~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~ 77 (272)
..+.+++.++|.+ +..++++++|.||++| + +|+++.|.|.++++.+.+++.|+.+|++.+ +
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~---~ 79 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---P 79 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSC---T
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCC---H
Confidence 3577899999985 5577899999999999 9 999999999999999988899999999998 8
Q ss_pred hHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 78 PFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 78 ~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
+++++|||.++ ||+ .++.+|. ....+.|..+.+.+.+|+++.+
T Consensus 80 ~l~~~~~v~~~-Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 GTAPKYGIRGI-PTL-LLFKNGE-VAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TTGGGGTCCBS-SEE-EEEESSS-EEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHHcCCCcc-CEE-EEEECCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999 999 6775554 3344588899999999998754
No 153
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.59 E-value=4e-15 Score=129.13 Aligned_cols=157 Identities=17% Similarity=0.245 Sum_probs=119.0
Q ss_pred hhHHHHHhhcCCCceEeeCcccccccccCCcceEEEEEEcc--cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhH
Q 024107 2 DKILQFLNYNKFPLVTKLTDINSASVHSSPIKLQVYVFAKA--DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPF 79 (272)
Q Consensus 2 ~~l~~fi~~~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~--~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l 79 (272)
++|.+||..++.|.+.++|.+++.+++..+.+++|.|+.++ ..++.+...+.+++..+++++.|+.+|+... ..+
T Consensus 207 ~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~---~~~ 283 (382)
T 2r2j_A 207 DVTYNWIQDKCVPLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKF---RHP 283 (382)
T ss_dssp HHHHHHHHHHHSCSSEECCHHHHHHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTT---HHH
T ss_pred HHHHHHHHhcccCceEecChhhHHHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHh---HHH
Confidence 46999999999999999999999999988999999999887 5567777888888888888999999999998 789
Q ss_pred HhhcCCC--CCCceEEEEEeCCcceeecC---CCCCChHHHHHHHHHHhcCccccccccCCCCCCC------CCCeEEec
Q 024107 80 LTLFGLE--ESKNTVVTAFDNKAISKFLL---ESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNT------NANVQIVV 148 (272)
Q Consensus 80 ~~~~~i~--~~~P~i~~~~~~~~~~~~~~---~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~------~~~v~~l~ 148 (272)
++.||++ .+ |++ ++.+.+.. |.| .+..+.++|.+|+.++++|+++++++|+++|++. ...+..+.
T Consensus 284 ~~~~gl~~~~~-P~i-~i~~~~~~--y~~~~~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~~~~~~~~~~~~~~~ 359 (382)
T 2r2j_A 284 LLHIQKTPADC-PVI-AIDSFRHM--YVFGDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQAQDVASSPP 359 (382)
T ss_dssp HHHTTCCGGGC-SEE-EEECSSCE--EECCCSGGGGSTTHHHHHHHHHHHTTTSSCC-------------------CCCC
T ss_pred HHHcCCCccCC-CEE-EEEcchhc--CCCCccccccCHHHHHHHHHHHHCCCccccccCCCCCCCCCcccccccCCCCCC
Confidence 9999998 45 999 77765433 444 2345779999999999999999999999999874 22234455
Q ss_pred ccchhHHhhcCCCcEEE
Q 024107 149 GKTFDDLVLNSHKDVLL 165 (272)
Q Consensus 149 ~~~~~~~v~~~~~~~lv 165 (272)
..+|.++.-+.++..++
T Consensus 360 ~s~f~~l~~~~~~~~~~ 376 (382)
T 2r2j_A 360 ESSFQKLAPSEYRYTLL 376 (382)
T ss_dssp CCSGGGGSCCTTTCEEC
T ss_pred cccccccCCCccceecc
Confidence 57788865444566554
No 154
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.59 E-value=1.4e-15 Score=111.66 Aligned_cols=104 Identities=9% Similarity=0.044 Sum_probs=93.0
Q ss_pred ceEeeCcccccccccCCcceEEEEEEcc---cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchhHHhhcCCCCCCc
Q 024107 15 LVTKLTDINSASVHSSPIKLQVYVFAKA---DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLFGLEESKN 90 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~~~~~~~v~fy~~~---~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~~~~l~~~~~i~~~~P 90 (272)
-+.++|+++|++.+.++.+++|.|+++| ++|+.+.|.+.++|++|.++ +.|++||.+++ ++++.+|||.+. |
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~---~~lA~~ygV~sI-P 93 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS---EAIGDRFGAFRF-P 93 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHH---HHHHHHHTCCSS-S
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCC---HHHHHHcCCccC-C
Confidence 4568899999998877789999999997 79999999999999999999 99999999999 999999999999 9
Q ss_pred eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 91 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 91 ~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
|+ ++|.+|+. .-...|..+.+.|.+++.+++.
T Consensus 94 Tl-ilFk~G~~-v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 94 AT-LVFTGGNY-RGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp EE-EEEETTEE-EEEEESCCCHHHHHHHHHHHHC
T ss_pred EE-EEEECCEE-EEEEecCCCHHHHHHHHHHHhc
Confidence 99 88887764 3344788999999999999874
No 155
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.59 E-value=8.2e-15 Score=104.46 Aligned_cols=103 Identities=13% Similarity=0.166 Sum_probs=88.3
Q ss_pred ceEee-CcccccccccC----CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 15 LVTKL-TDINSASVHSS----PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 15 ~v~~l-~~~~f~~~~~~----~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
.+.++ +.++|.+.+.. +++++|.||++| ++|+.+.|.|.++++.+.+.+.|+.+|++.. ++++++|||.++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~ 79 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAV---AAVAEAAGITAM 79 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTT---HHHHHHHTCCBS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCch---HHHHHHcCCCcc
Confidence 35566 56889888765 789999999999 9999999999999999997799999999998 899999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
||+ .++.++. ....+.|. +.+.+.+|+.+.++
T Consensus 80 -Pt~-~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 80 -PTF-HVYKDGV-KADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp -SEE-EEEETTE-EEEEEESC-CHHHHHHHHHHHHC
T ss_pred -cEE-EEEECCe-EEEEEcCC-CHHHHHHHHHHHhc
Confidence 999 7776554 33445777 99999999998864
No 156
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.59 E-value=1.6e-14 Score=105.34 Aligned_cols=107 Identities=9% Similarity=0.039 Sum_probs=91.2
Q ss_pred CceEeeCccccc-----ccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEe--CCCcccchhHHhhcCC
Q 024107 14 PLVTKLTDINSA-----SVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVD--IADEDLAKPFLTLFGL 85 (272)
Q Consensus 14 ~~v~~l~~~~f~-----~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd--~~~~~~~~~l~~~~~i 85 (272)
..+..++..+++ ....++++++|.||++| ++|+.+.|.+.++++.+.+.+.|+.|| ++.. .+++++|||
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~---~~~~~~~~v 80 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKN---IDLAYKYDA 80 (126)
T ss_dssp CCSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHH---HHHHHHTTC
T ss_pred cccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCch---HHHHHHcCC
Confidence 445667777777 56677889999999999 999999999999999998779999999 8887 899999999
Q ss_pred CCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 86 EESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 86 ~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
.++ ||+ .+++.++.....+.|..+.+.|.+++.+.+..
T Consensus 81 ~~~-Pt~-~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 81 NIV-PTT-VFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp CSS-SEE-EEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred cce-eEE-EEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 999 999 88884434445568899999999999998653
No 157
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.58 E-value=1.1e-14 Score=103.61 Aligned_cols=101 Identities=13% Similarity=0.076 Sum_probs=87.4
Q ss_pred CceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 14 PLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 14 ~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
......+.++|++.+.++++++|.||++| ++|+++.|.|.++++.+.+ +.|+.||++.. ++++++|+|.++ ||+
T Consensus 7 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~---~~l~~~~~v~~~-Pt~ 81 (109)
T 3f3q_A 7 MVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDEL---GDVAQKNEVSAM-PTL 81 (109)
T ss_dssp CCEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSS-SEE
T ss_pred cccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCC---HHHHHHcCCCcc-CEE
Confidence 34556688899999999999999999999 9999999999999999987 99999999998 899999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
.++.+++ ....+.|. +.+.|.+++.+.
T Consensus 82 -~~~~~G~-~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 82 -LLFKNGK-EVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp -EEEETTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred -EEEECCE-EEEEEeCC-CHHHHHHHHHhh
Confidence 7887553 33344666 779999999875
No 158
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.58 E-value=1e-14 Score=102.81 Aligned_cols=100 Identities=13% Similarity=0.156 Sum_probs=86.2
Q ss_pred eEeeCc-cccccccc--CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 16 VTKLTD-INSASVHS--SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 16 v~~l~~-~~f~~~~~--~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
+.+++. ++|.+.+. ++++++|.||++| ++|+++.|.+.++++.+.+.+.|+.+|++.. ++++++||+.++ ||
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDEC---EDIAMEYNISSM-PT 77 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC---HHHHHHTTCCSS-SE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccch---HHHHHHcCCCcc-cE
Confidence 456777 88988876 7889999999999 9999999999999999977799999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
+ .++.+|. ....+.| .+.+.+.+|+.+.
T Consensus 78 ~-~~~~~G~-~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 78 F-VFLKNGV-KVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp E-EEEETTE-EEEEEES-CCHHHHHHHHHHT
T ss_pred E-EEEcCCc-EEEEEcC-CCHHHHHHHHHHh
Confidence 9 7776554 3334567 7889999998875
No 159
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.58 E-value=6.1e-15 Score=106.66 Aligned_cols=107 Identities=18% Similarity=0.116 Sum_probs=91.5
Q ss_pred CCCceEeeCcccccc-cccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 12 KFPLVTKLTDINSAS-VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 12 s~~~v~~l~~~~f~~-~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
....+..++.++|.+ ...++++++|+||++| ++|+.+.|.|.++++.+.+.+.|+.||++.. +.++++|||.++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~i~~~- 85 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTN---PETARNFQVVSI- 85 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---HHHHHHTTCCSS-
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCC---HHHHHhcCCCcC-
Confidence 345688899999986 4567889999999999 9999999999999999988899999999998 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
||+ .++.++. ....+.|..+.+.+.+|+.+.++
T Consensus 86 Pt~-~~~~~g~-~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 86 PTL-ILFKDGQ-PVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp SEE-EEEETTE-EEEEEESCCCHHHHHHHTCSCCC
T ss_pred CEE-EEEECCE-EEEEecCCCCHHHHHHHHHHHHh
Confidence 999 7777553 34455889999999999887654
No 160
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.58 E-value=1.2e-14 Score=116.64 Aligned_cols=109 Identities=20% Similarity=0.254 Sum_probs=96.6
Q ss_pred CCCceEeeCcccccc-cccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 12 KFPLVTKLTDINSAS-VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 12 s~~~v~~l~~~~f~~-~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
....+..+|+++|.+ ++.++++++|.||++| ++|+.+.|.|.++++.+.+++.|+.||++.. +.++++|+|.++
T Consensus 10 ~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~---~~l~~~~~v~~~- 85 (222)
T 3dxb_A 10 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYGIRGI- 85 (222)
T ss_dssp CSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---TTTGGGGTCCSB-
T ss_pred CCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCC---HHHHHHcCCCcC-
Confidence 345788999999988 5778899999999999 9999999999999999998899999999998 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 126 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 126 (272)
||+ .++.++. ....+.|..+.+.+.+|+.+.+.+.
T Consensus 86 Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 86 PTL-LLFKNGE-VAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp SEE-EEEETTE-EEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred CEE-EEEECCe-EEEEeccccChHHHHHHHHhhcccc
Confidence 999 7777554 3345589999999999999998754
No 161
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.58 E-value=7.7e-15 Score=107.08 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=88.8
Q ss_pred eEeeCc-ccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 16 VTKLTD-INSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 16 v~~l~~-~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
+.+++. ++|++.+.++++++|.||++| ++|+.+.|.|.++++.+.+ +.|+.||++.. ++++++|+|.++ ||+
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~---~~l~~~~~v~~~-Pt~- 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPT-VKFAKVDADNN---SEIVSKCRVLQL-PTF- 94 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSS-SEE-
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCC---HHHHHHcCCCcc-cEE-
Confidence 778888 999998888899999999999 9999999999999999964 99999999998 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
.++.++. ....+.| .+.+.|.+++.+.++
T Consensus 95 ~i~~~G~-~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 95 IIARSGK-MLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEETTE-EEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEEeCCe-EEEEEeC-CCHHHHHHHHHHHhc
Confidence 7776554 3334467 788999999999864
No 162
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.58 E-value=2e-14 Score=102.35 Aligned_cols=103 Identities=12% Similarity=0.143 Sum_probs=87.9
Q ss_pred CCceEeeCccccccccc--CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-CcccchhHHhhcCCCCC
Q 024107 13 FPLVTKLTDINSASVHS--SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA-DEDLAKPFLTLFGLEES 88 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~--~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~-~~~~~~~l~~~~~i~~~ 88 (272)
...+..++.++|.+.+. ++++++|.||++| ++|+.+.|.|.++++.+.+ +.|+.+|++ .. .+++++|||.++
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~---~~~~~~~~v~~~ 79 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQEN---KTLAKELGIRVV 79 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTT---HHHHHHHCCSBS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcch---HHHHHHcCCCee
Confidence 45788999999999876 5789999999999 9999999999999999986 999999998 56 799999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
||+ .++.++.. ...+.|. +.+.|.+++.+.+
T Consensus 80 -Pt~-~~~~~G~~-~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 80 -PTF-KILKENSV-VGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp -SEE-EEESSSSE-EEEEESS-CHHHHHHHHHHHH
T ss_pred -eEE-EEEeCCcE-EEEEcCC-CHHHHHHHHHHhh
Confidence 998 77765543 3334665 4899999998864
No 163
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.58 E-value=8.8e-15 Score=107.15 Aligned_cols=104 Identities=13% Similarity=0.215 Sum_probs=87.0
Q ss_pred CCCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCc
Q 024107 12 KFPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 90 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P 90 (272)
..|.+..++.+.+.....++++++|.||++| ++|+++.|.+.++++.+.+++.|+.||++.. ++++++|||.++ |
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~---~~l~~~~~v~~~-P 98 (128)
T 3ul3_B 23 KVPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKN---ESLARKFSVKSL-P 98 (128)
T ss_dssp ---CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGC---HHHHHHTTCCSS-S
T ss_pred cCCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC---HHHHHHcCCCCc-C
Confidence 3445555566667667788899999999999 9999999999999999998899999999999 899999999999 9
Q ss_pred eEEEEEeCCcceeecCCCCCChHHHHHHHHH
Q 024107 91 TVVTAFDNKAISKFLLESDLTPSNIEEFCSR 121 (272)
Q Consensus 91 ~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 121 (272)
|+ .++.+++ ....+.|..+.+.|.+|+++
T Consensus 99 t~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 99 TI-ILLKNKT-MLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EE-EEEETTE-EEEEESSCCCHHHHHHHHTT
T ss_pred EE-EEEECCE-EEEEecCCCCHHHHHHHHHh
Confidence 99 7776553 34456899999999999864
No 164
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.57 E-value=8e-15 Score=122.25 Aligned_cols=108 Identities=18% Similarity=0.267 Sum_probs=95.0
Q ss_pred CCCceEeeCcccccccccC--CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 12 KFPLVTKLTDINSASVHSS--PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~~--~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
+.+.|.++|.++|++++.. +++++|.||++| ++|+.+.|.|.++++++.+++.|+.|||+.+ ++++++|||.++
T Consensus 5 ~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~ 81 (287)
T 3qou_A 5 SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAE---QMIAAQFGLRAI 81 (287)
T ss_dssp -CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTC---HHHHHTTTCCSS
T ss_pred CCCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccC---HHHHHHcCCCCC
Confidence 4678999999999998754 789999999999 9999999999999999998899999999998 899999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
||+ .++.+++ ....+.|..+.+.+.+|+...+++
T Consensus 82 -Pt~-~~~~~G~-~~~~~~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 82 -PTV-YLFQNGQ-PVDGFQGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp -SEE-EEEETTE-EEEEEESCCCHHHHHHHHHHHSCC
T ss_pred -CeE-EEEECCE-EEEEeeCCCCHHHHHHHHHHHcCC
Confidence 999 7776553 333458899999999999998643
No 165
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.57 E-value=7.3e-15 Score=104.95 Aligned_cols=105 Identities=14% Similarity=0.153 Sum_probs=90.0
Q ss_pred cCCCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 11 NKFPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 11 ~s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
.+.+....++.++|++.+..+++++|+||++| ++|+.+.|.+.++++.+.+ +.|+.||++.. +.++++|||.++
T Consensus 6 ~~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~---~~~~~~~~v~~~- 80 (112)
T 1syr_A 6 HHHMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEV---SEVTEKENITSM- 80 (112)
T ss_dssp ---CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTT---HHHHHHTTCCSS-
T ss_pred cceeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCC---HHHHHHcCCCcc-
Confidence 45567788899999999988899999999999 9999999999999999986 99999999998 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
||+ .++.+|. ....+.|. +.+.|.+|+.+.+
T Consensus 81 Pt~-~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 81 PTF-KVYKNGS-SVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp SEE-EEEETTE-EEEEEESC-CHHHHHHHHHTTC
T ss_pred cEE-EEEECCc-EEEEEeCC-CHHHHHHHHHHhh
Confidence 999 7776554 33345777 9999999998754
No 166
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.57 E-value=1.2e-14 Score=105.26 Aligned_cols=105 Identities=12% Similarity=0.100 Sum_probs=90.6
Q ss_pred CCCceEeeCccccccccc----CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCC
Q 024107 12 KFPLVTKLTDINSASVHS----SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLE 86 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~----~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~ 86 (272)
..+.+..++.++|.+.+. .+++++|+||++| ++|+.+.|.|.++++.+.+ +.|+.||++.. ++++++|||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~---~~~~~~~~v~ 86 (122)
T 2vlu_A 11 AAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDEL---KPIAEQFSVE 86 (122)
T ss_dssp -CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCC
T ss_pred CCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCC---HHHHHHcCCC
Confidence 456778889999998775 4789999999999 9999999999999999988 99999999998 8999999999
Q ss_pred CCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 87 ESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 87 ~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
++ ||+ .++.++. ....+.|.. .+.|.+|+.+.++
T Consensus 87 ~~-Pt~-~~~~~G~-~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 87 AM-PTF-LFMKEGD-VKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SS-SEE-EEEETTE-EEEEEESSC-HHHHHHHHHHHHS
T ss_pred cc-cEE-EEEeCCE-EEEEEeCcC-HHHHHHHHHHHhc
Confidence 99 999 7776554 334457877 9999999999875
No 167
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.56 E-value=2.6e-14 Score=101.10 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=82.7
Q ss_pred Eee-Ccccccccc--cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 17 TKL-TDINSASVH--SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 17 ~~l-~~~~f~~~~--~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
.++ +.++|.+.+ .++++++|+||++| ++|+.+.|.|.++++.+. .+.|+.+|++.. ++++++|||.++ ||+
T Consensus 4 ~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~ 78 (107)
T 1gh2_A 4 KPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQC---QGTAATNNISAT-PTF 78 (107)
T ss_dssp EEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTS---HHHHHHTTCCSS-SEE
T ss_pred EEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccC---HHHHHhcCCCcc-cEE
Confidence 344 678898888 57889999999999 999999999999999995 599999999998 899999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
.++.++.. ...+.| .+.+.|.+|+.+.+
T Consensus 79 -~~~~~G~~-~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 79 -QFFRNKVR-IDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp -EEEETTEE-EEEEES-SCHHHHHHHHHHHH
T ss_pred -EEEECCeE-EEEEeC-CCHHHHHHHHHHhc
Confidence 77765542 333466 45566999998875
No 168
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.56 E-value=9.3e-16 Score=134.37 Aligned_cols=107 Identities=18% Similarity=0.257 Sum_probs=86.1
Q ss_pred CCCCeEEecccchhHHhhc-CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCC------ceEEEEEeCCCC-CCC-CC
Q 024107 140 TNANVQIVVGKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLD------NLVIAKIDASAN-EHP-KL 210 (272)
Q Consensus 140 ~~~~v~~l~~~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~------~v~~~~id~~~~-~~~-~~ 210 (272)
....+..++.++|++.+.. .+++++|.|||+||++|+.+.|.|.++++.+.... ++.|+.||++.+ ++. ++
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y 100 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKY 100 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHc
Confidence 3567999999999998753 35799999999999999999999999999997432 499999999999 664 89
Q ss_pred cccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHH
Q 024107 211 QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE 247 (272)
Q Consensus 211 ~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 247 (272)
+|.++||+++|++|+...+.+|.|..+.+.| .||.+
T Consensus 101 ~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k 136 (470)
T 3qcp_A 101 DINFVPRLFFFYPRDSCRSNEECGTSSLEHV-AFENS 136 (470)
T ss_dssp TCCSSCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCT
T ss_pred CCCccCeEEEEECCCceEEEEeeCCCCHHHH-HHHHH
Confidence 9999999999976655435578887555544 44333
No 169
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=6.4e-15 Score=108.03 Aligned_cols=105 Identities=23% Similarity=0.424 Sum_probs=85.9
Q ss_pred EEecccchhHHhh---cCCCcEEEEEECCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCC--C-CC-CCCcccC
Q 024107 145 QIVVGKTFDDLVL---NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASA--N-EH-PKLQVEE 214 (272)
Q Consensus 145 ~~l~~~~~~~~v~---~~~~~~lv~f~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~--~-~~-~~~~v~~ 214 (272)
..++..+|.+.+. ..+++++|+||++||++|+.+.+.+ ..++..+.. ++.++.+|++. + .+ .++++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~ 86 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEGVELRKKYGVHA 86 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTHHHHHHHTTCCS
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcchHHHHHHcCCCC
Confidence 3456778888764 3578999999999999999999999 777777765 78999999985 3 44 3889999
Q ss_pred CCeEEEE-eCCCCcCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 215 YPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 215 ~P~l~~~-~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
+|++++| ++|+... ++.|..+.+.|.++|++.++...
T Consensus 87 ~Pt~~~~d~~G~~~~--~~~G~~~~~~l~~~l~~~~~~~~ 124 (130)
T 2kuc_A 87 YPTLLFINSSGEVVY--RLVGAEDAPELLKKVKLGVESEG 124 (130)
T ss_dssp SCEEEEECTTSCEEE--EEESCCCHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCcEEE--EecCCCCHHHHHHHHHHHHHhcc
Confidence 9999999 5665443 78999999999999999987654
No 170
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.56 E-value=3.7e-14 Score=104.59 Aligned_cols=102 Identities=16% Similarity=0.248 Sum_probs=88.6
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccC--CCeE
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEE--YPTL 218 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~--~P~l 218 (272)
.+..++..+|.+.+ ....+++|+||++ |++|+.+.|.+.++|+++++ ++.|+.+|.+.+ .+. .|++.+ +|++
T Consensus 7 lv~~~t~~~f~~~~-~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g--k~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 7 LIGEIGPETYSDYM-SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG--VINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp CSEECCHHHHHHHH-HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT--TSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred ceeccChHHHHHHh-cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC--eEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 47788999999874 6788999999999 89999999999999999998 899999999998 564 889999 9999
Q ss_pred EEEeC--CCCcCceEee--CCCCHHHHHHHHHHHcCc
Q 024107 219 LFYPA--GDKANPIKVS--ARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 219 ~~~~~--~~~~~~~~~~--g~~~~~~l~~~i~~~~~~ 251 (272)
++|+. |++. +.. |..+.+.|.+||++.+.-
T Consensus 83 ~i~~~~~g~~~---~~~~~g~~~~~~l~~fi~~~l~G 116 (133)
T 2djk_A 83 AIQEVAKNQKF---PFDQEKEITFEAIKAFVDDFVAG 116 (133)
T ss_dssp EEECTTTCCBC---CCCSSSCCCHHHHHHHHHHHHHT
T ss_pred EEEecCcCccc---CCCCccccCHHHHHHHHHHHHcC
Confidence 99986 4442 444 899999999999998853
No 171
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.55 E-value=3.3e-14 Score=101.37 Aligned_cols=102 Identities=13% Similarity=0.181 Sum_probs=84.1
Q ss_pred eEeeCc-ccccccccC---CcceEEEEEEcc-cchHHHHHHHHHHHHHhc-CceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 16 VTKLTD-INSASVHSS---PIKLQVYVFAKA-DDLKSLLEPLEDIARNFK-GKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 16 v~~l~~-~~f~~~~~~---~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~-~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
+.+++. ++|.+.+.+ +++++|.||++| ++|+.+.|.|.++++.+. +.+.|+.+|++.. ++++++|||.++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~- 77 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN---SEISELFEISAV- 77 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC---HHHHHHTTCCSS-
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC---HHHHHHcCCCcc-
Confidence 567777 889988865 789999999999 999999999999999963 4599999999998 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
||+ .++.+|. ....+.|. ..+.|.+++.+.++
T Consensus 78 Pt~-~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 78 PYF-IIIHKGT-ILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp SEE-EEEETTE-EEEEECSC-CHHHHHHHHHHHHH
T ss_pred cEE-EEEECCE-EEEEecCC-CHHHHHHHHHHHHh
Confidence 999 7776553 33344665 55679999998764
No 172
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.55 E-value=3.2e-13 Score=110.47 Aligned_cols=209 Identities=13% Similarity=0.160 Sum_probs=154.0
Q ss_pred cCCCceEeeC-cccccccccCCcceEEEEEEcccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 11 NKFPLVTKLT-DINSASVHSSPIKLQVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 11 ~s~~~v~~l~-~~~f~~~~~~~~~~~v~fy~~~~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
.+.|.+.+++ .+.+++++.....++|.||.++ |......|.++|..+++.+.|+.+. . ..++++++++.
T Consensus 3 ~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~--~~~~~~~f~~~A~~lr~~~~F~~~~---~---~~v~~~~~~~~-- 72 (252)
T 2h8l_A 3 LGSPASVPLRTEEEFKKFISDKDASIVGFFDDS--FSEAHSEFLKAASNLRDNYRFAHTN---V---ESLVNEYDDNG-- 72 (252)
T ss_dssp ---CCEEECCSHHHHHHHHTSSSCEEEEEESCT--TSHHHHHHHHHHHHTTTTSCEEEEC---C---HHHHHHHCSSS--
T ss_pred cCCCCceeecCHHHHHHHhhcCCeEEEEEECCC--CChHHHHHHHHHHhcccCcEEEEEC---h---HHHHHHhCCCC--
Confidence 3568888895 5667777887778899999987 4555678999999998889998873 3 57999999984
Q ss_pred ceEEEEEeCC------cceeecC-CCCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCCc
Q 024107 90 NTVVTAFDNK------AISKFLL-ESDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKD 162 (272)
Q Consensus 90 P~i~~~~~~~------~~~~~~~-~g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~~ 162 (272)
|++ .+|.++ ......| .|..+.+.|.+|+....- ..+..++.+++..+ -+.+
T Consensus 73 p~i-~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~-----------------Plv~e~t~~n~~~~---~~~~ 131 (252)
T 2h8l_A 73 EGI-ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIF-----------------GICPHMTEDNKDLI---QGKD 131 (252)
T ss_dssp EEE-EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSS-----------------CSSCEECTTTHHHH---SSSS
T ss_pred CcE-EEEcchhhcccccccccccCCCCcCHHHHHHHHHhccc-----------------CCeeecccccHhhh---cCCC
Confidence 999 777642 1234567 888999999999999642 24888999999885 2456
Q ss_pred EEEEEECCCChh----HHHhHHHHHHHHHHhcCC-CceEEEEEeCCCC-CC-CCCcc----cCCCeEEEEeCCCCcCceE
Q 024107 163 VLLEVYTPWCVT----CETTSKQIEKLAKHFKGL-DNLVIAKIDASAN-EH-PKLQV----EEYPTLLFYPAGDKANPIK 231 (272)
Q Consensus 163 ~lv~f~~~~C~~----c~~~~~~~~~~a~~~~~~-~~v~~~~id~~~~-~~-~~~~v----~~~P~l~~~~~~~~~~~~~ 231 (272)
++|.|+.+.+.. .......+.++|+.+++. ..+.|+.+|++.+ .. ..+++ ..+|.+.++...+. ...
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~--ky~ 209 (252)
T 2h8l_A 132 LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGE--KFV 209 (252)
T ss_dssp EEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSC--EEE
T ss_pred eEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCc--Eec
Confidence 777777654321 224778889999999871 1399999999877 33 35677 36899999964322 224
Q ss_pred eeCCCCHHH--HHHHHHHHcCcC
Q 024107 232 VSARSSSKN--IAAFIKEQLKEK 252 (272)
Q Consensus 232 ~~g~~~~~~--l~~~i~~~~~~~ 252 (272)
+.+..+.+. |.+|+++.+.-.
T Consensus 210 ~~~~~t~~~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 210 MQEEFSRDGKALERFLQDYFDGN 232 (252)
T ss_dssp CCSCCCTTSHHHHHHHHHHHHTC
T ss_pred CCcccCcchHHHHHHHHHHHCCC
Confidence 557778888 999999988533
No 173
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.54 E-value=2e-14 Score=101.11 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=83.3
Q ss_pred Cccccccccc--CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEE
Q 024107 20 TDINSASVHS--SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAF 96 (272)
Q Consensus 20 ~~~~f~~~~~--~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~ 96 (272)
+.++|++.+. ++++++|+||++| ++|+.+.|.+.++++.+.+ +.|+.+|++.. ++++++||+.++ ||+ .++
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~~ 80 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDC---QDVASESEVKSM-PTF-QFF 80 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTC---HHHHHHTTCCBS-SEE-EEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhh---HHHHHHcCCCcC-cEE-EEE
Confidence 5667877776 7889999999999 9999999999999999987 99999999999 899999999999 999 777
Q ss_pred eCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 97 DNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
.+++ ....+.|. +.+.+.+|+.+.+
T Consensus 81 ~~g~-~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 81 KKGQ-KVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp ETTE-EEEEEESS-CHHHHHHHHHHHC
T ss_pred ECCe-EEEEEeCC-CHHHHHHHHHHhC
Confidence 6554 33345777 9999999998763
No 174
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.54 E-value=3.3e-14 Score=114.83 Aligned_cols=102 Identities=10% Similarity=0.046 Sum_probs=88.5
Q ss_pred CCceEeeCcccccccccCCcceEEEEEE--cc-cchHHHHHHHHHHHHHhc--CceEEEEEeCC-----CcccchhHHhh
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFA--KA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIA-----DEDLAKPFLTL 82 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~--~~-~~c~~~~~~~~~~a~~~~--~~i~~~~vd~~-----~~~~~~~l~~~ 82 (272)
.+.|.++++.+|++++..+++++|.||+ +| + +.|.|.++|..+. +.+.|+.|||+ .+ +++|++
T Consensus 4 ~~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~---~~l~~~ 76 (240)
T 2qc7_A 4 TKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLN---MELSEK 76 (240)
T ss_dssp CTTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCS---HHHHHH
T ss_pred CCCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhh---HHHHHH
Confidence 4568899999999988888899999999 99 5 9999999999996 46999999954 46 899999
Q ss_pred cCCC--CCCceEEEEEeCCc-ceeecCCCCCChHHHHHHHHHHh
Q 024107 83 FGLE--ESKNTVVTAFDNKA-ISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 83 ~~i~--~~~P~i~~~~~~~~-~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
|+|. ++ ||+ .+|.++. .....|.|.++.+.|.+|+.+..
T Consensus 77 ~~V~~~~~-PTl-~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 77 YKLDKESY-PVF-YLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp TTCCGGGC-SEE-EEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred cCCCCCCC-CEE-EEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9999 99 999 8888765 23455689999999999999974
No 175
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.54 E-value=6.1e-14 Score=101.91 Aligned_cols=104 Identities=12% Similarity=0.130 Sum_probs=88.2
Q ss_pred CCCceEeeCccccccccc--CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-CcccchhHHhhcCCCC
Q 024107 12 KFPLVTKLTDINSASVHS--SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA-DEDLAKPFLTLFGLEE 87 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~--~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~-~~~~~~~l~~~~~i~~ 87 (272)
....+..++.++|.+.+. ++++++|.||++| ++|+++.|.+.++++.+.+ +.|+.+|++ .. ++++++|||.+
T Consensus 16 ~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~---~~~~~~~~v~~ 91 (124)
T 1faa_A 16 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQEN---KTLAKELGIRV 91 (124)
T ss_dssp TTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTT---HHHHHHHCCSS
T ss_pred cCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcch---HHHHHHcCCCe
Confidence 455788999999998775 6789999999999 9999999999999999986 999999998 56 79999999999
Q ss_pred CCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 88 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
+ ||+ .++.++.. ...+.|.. .+.+.+++.+.+
T Consensus 92 ~-Pt~-~~~~~G~~-~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 92 V-PTF-KILKENSV-VGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp S-SEE-EEEETTEE-EEEEESSC-HHHHHHHHHHHT
T ss_pred e-eEE-EEEeCCcE-EEEEcCCC-HHHHHHHHHHhh
Confidence 9 999 77766543 33346655 899999998864
No 176
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.54 E-value=4.2e-14 Score=99.26 Aligned_cols=98 Identities=12% Similarity=0.175 Sum_probs=83.8
Q ss_pred EeeCc-cccccccc--CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 17 TKLTD-INSASVHS--SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 17 ~~l~~-~~f~~~~~--~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
.+++. ++|++.+. ++++++|.||++| ++|+.+.|.+.++++.+. .+.|+.+|++.. ++++++||+.++ ||+
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~ 76 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQN---EEAAAKYSVTAM-PTF 76 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTC---HHHHHHTTCCSS-SEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCC---HHHHHHcCCccc-cEE
Confidence 45555 78888776 6889999999999 999999999999999997 599999999998 899999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
.++.+|. ....+.| .+.+.+.+|+.++
T Consensus 77 -~~~~~g~-~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 77 -VFIKDGK-EVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp -EEEETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred -EEEeCCc-EEEEEeC-CCHHHHHHHHHhh
Confidence 7777554 3334467 6899999999875
No 177
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.54 E-value=3.7e-14 Score=101.99 Aligned_cols=99 Identities=13% Similarity=0.180 Sum_probs=85.3
Q ss_pred ceEeeCc-cccccccc--CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCc
Q 024107 15 LVTKLTD-INSASVHS--SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKN 90 (272)
Q Consensus 15 ~v~~l~~-~~f~~~~~--~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P 90 (272)
.+.+++. ++|.+.+. ++++++|.||++| ++|+++.|.|.++++.+ .+.|+.+|++.. ++++++|||.++ |
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~---~~~~~~~~v~~~-P 87 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKL---EETARKYNISAM-P 87 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTS---HHHHHHTTCCSS-S
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCcc---HHHHHHcCCCcc-c
Confidence 3778887 88988886 7889999999999 99999999999999998 599999999998 899999999999 9
Q ss_pred eEEEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 91 TVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 91 ~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
|+ .++.++. ....+.| .+.+.|.+++.+.
T Consensus 88 t~-~~~~~G~-~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 88 TF-IAIKNGE-KVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EE-EEEETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred eE-EEEeCCc-EEEEEeC-CCHHHHHHHHHHh
Confidence 99 7776554 3334467 6889999999875
No 178
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.53 E-value=3.5e-14 Score=95.92 Aligned_cols=81 Identities=19% Similarity=0.374 Sum_probs=71.3
Q ss_pred CcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCH
Q 024107 161 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSS 238 (272)
Q Consensus 161 ~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~ 238 (272)
...+++||++||++|+.+.|.+.++++.+.+ ++.+..+|++.+ ++ .++++.++|++++ +|+. ++.|..+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~----~~~G~~~~ 74 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV----EFIGAPTK 74 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE----ECCSSSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE----eeecCCCH
Confidence 4679999999999999999999999999986 799999999988 66 4899999999998 5542 68898899
Q ss_pred HHHHHHHHHHc
Q 024107 239 KNIAAFIKEQL 249 (272)
Q Consensus 239 ~~l~~~i~~~~ 249 (272)
+.|.++|++.+
T Consensus 75 ~~l~~~l~~~l 85 (85)
T 1fo5_A 75 EALVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998764
No 179
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.53 E-value=1.4e-15 Score=111.46 Aligned_cols=107 Identities=25% Similarity=0.427 Sum_probs=90.0
Q ss_pred CCCeEEec-ccchhHHhhc---CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccC
Q 024107 141 NANVQIVV-GKTFDDLVLN---SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEE 214 (272)
Q Consensus 141 ~~~v~~l~-~~~~~~~v~~---~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~ 214 (272)
...+..++ .++|.+.+.. .+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+ ++. ++++.+
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHHHTCCS
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHHcCCCc
Confidence 44566774 4889888865 48899999999999999999999999999986 599999999988 664 789999
Q ss_pred CCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 215 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 215 ~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
+|++++|++|+... ++.| .+.+.|.++|++.+....
T Consensus 90 ~Pt~~~~~~g~~~~--~~~g-~~~~~l~~~l~~~~~~~~ 125 (130)
T 1wmj_A 90 MPTFLFIKDGAEAD--KVVG-ARKDDLQNTIVKHVGATA 125 (130)
T ss_dssp SCCCCBCTTTTCCB--CCCT-TCTTTHHHHHHHHTSSSC
T ss_pred cceEEEEeCCeEEE--EEeC-CCHHHHHHHHHHHHhccC
Confidence 99999998887654 6777 588999999999887543
No 180
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.52 E-value=3.4e-14 Score=106.88 Aligned_cols=103 Identities=11% Similarity=0.041 Sum_probs=88.1
Q ss_pred eeCcccccccc--cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEE
Q 024107 18 KLTDINSASVH--SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVT 94 (272)
Q Consensus 18 ~l~~~~f~~~~--~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~ 94 (272)
..+.++|++.+ .++++++|.||++| ++|+.+.|.|.++++.+.+++.|+.||++.. ++++++|+|.++ ||+ .
T Consensus 8 i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~---~~l~~~~~v~~~-Pt~-~ 82 (149)
T 3gix_A 8 LTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQT---AVYTQYFDISYI-PST-V 82 (149)
T ss_dssp ECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTC---CHHHHHTTCCSS-SEE-E
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcC---HHHHHHcCCCcc-CeE-E
Confidence 34677888876 56889999999999 9999999999999999998899999999998 899999999999 999 6
Q ss_pred EEeCCccee--------ecCCC-CCChHHHHHHHHHHhcC
Q 024107 95 AFDNKAISK--------FLLES-DLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 95 ~~~~~~~~~--------~~~~g-~~~~~~i~~fi~~~~~~ 125 (272)
++.+++... ..+.| ..+.+.|.++++..+.+
T Consensus 83 ~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 83 FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 777654320 34577 78999999999998754
No 181
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.52 E-value=3.2e-14 Score=103.07 Aligned_cols=102 Identities=16% Similarity=0.149 Sum_probs=87.3
Q ss_pred ceEee-CcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 15 LVTKL-TDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 15 ~v~~l-~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
.+..+ +.++|++.+..+++++|+||++| ++|+.+.|.|.++++.+.+. +.|+.+|++.. ++++++|+|.++ ||
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~---~~~~~~~~v~~~-Pt 91 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ---SQIAQEVGIRAM-PT 91 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC---HHHHHHHTCCSS-SE
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC---HHHHHHcCCCcc-cE
Confidence 44445 44889998888899999999999 99999999999999999876 99999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
+ .++.++. ....+.|. +.+.|.+|+.+.+
T Consensus 92 ~-~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 92 F-VFFKNGQ-KIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp E-EEEETTE-EEEEEESS-CHHHHHHHHHHHT
T ss_pred E-EEEECCe-EEeeEcCC-CHHHHHHHHHHhh
Confidence 9 7776553 33445777 9999999999865
No 182
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.52 E-value=2.9e-14 Score=101.50 Aligned_cols=102 Identities=11% Similarity=0.201 Sum_probs=86.0
Q ss_pred ceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 15 LVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
.+..++.++| +.+.++++++|.||++| ++|+.+.|.|.++++.+. .+.|+.+|++.. ++++++||+.++ ||+
T Consensus 4 ~~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~---~~l~~~~~v~~~-Pt~- 76 (110)
T 2l6c_A 4 IRDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEAR---PELMKELGFERV-PTL- 76 (110)
T ss_dssp CSBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGC---HHHHHHTTCCSS-CEE-
T ss_pred eeecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCC---HHHHHHcCCccc-CEE-
Confidence 3456788899 66667789999999999 999999999999999987 499999999988 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
.++.++. ....+.|..+.+.|.+++..+.+
T Consensus 77 ~~~~~G~-~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 77 VFIRDGK-VAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp EEEESSS-EEEEEESCCCHHHHHHHHHTC--
T ss_pred EEEECCE-EEEEEcCCCCHHHHHHHHHHHhh
Confidence 7776554 33445788999999999998754
No 183
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.52 E-value=2.1e-14 Score=105.74 Aligned_cols=88 Identities=22% Similarity=0.383 Sum_probs=74.8
Q ss_pred cCCCcEEEEEECCCChhHHHhHHHHH--HHHHHhcCCCceEEEEEeC---CCC-CC-CCCcc---cCCCeEEEE-eCCCC
Q 024107 158 NSHKDVLLEVYTPWCVTCETTSKQIE--KLAKHFKGLDNLVIAKIDA---SAN-EH-PKLQV---EEYPTLLFY-PAGDK 226 (272)
Q Consensus 158 ~~~~~~lv~f~~~~C~~c~~~~~~~~--~~a~~~~~~~~v~~~~id~---~~~-~~-~~~~v---~~~P~l~~~-~~~~~ 226 (272)
..+++++|+||++||++|+.+.|.+. +++..+.+ ++.++.+|+ +.+ ++ .++++ .++|++++| ++|+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 45899999999999999999999999 99999976 799999999 666 55 38899 999999999 66654
Q ss_pred cCceEeeC-------CCCHHHHHHHHHHHc
Q 024107 227 ANPIKVSA-------RSSSKNIAAFIKEQL 249 (272)
Q Consensus 227 ~~~~~~~g-------~~~~~~l~~~i~~~~ 249 (272)
+. ++.| ..+.+.+.+||++..
T Consensus 105 ~~--~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 105 RY--TTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EE--ECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EE--EecCCcccccccCCHHHHHHHHHHhc
Confidence 43 5667 678999999998753
No 184
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.51 E-value=3.7e-14 Score=100.90 Aligned_cols=87 Identities=10% Similarity=0.161 Sum_probs=68.6
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCC---CceEEEEEeCCCC---CCC-CCcccCCCeEEEEeCCCCcCceE
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGL---DNLVIAKIDASAN---EHP-KLQVEEYPTLLFYPAGDKANPIK 231 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~---~~v~~~~id~~~~---~~~-~~~v~~~P~l~~~~~~~~~~~~~ 231 (272)
+...++|+||++||++|+.+.+.+. ..+... ..+.+..+|++.+ +++ +++|.++||+++|++|+.+. |
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~---~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~--R 91 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIA---PQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESG--R 91 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTT---TTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEE--E
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHH---hhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEe--e
Confidence 3568999999999999999986443 333321 0267888888886 354 78999999999999998875 8
Q ss_pred eeCCCCHHHHHHHHHHHcC
Q 024107 232 VSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 232 ~~g~~~~~~l~~~i~~~~~ 250 (272)
+.|..+.+.|..||++.+.
T Consensus 92 i~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 92 LEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EECCCCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHh
Confidence 9999999999999998764
No 185
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.51 E-value=3.4e-14 Score=96.01 Aligned_cols=80 Identities=16% Similarity=0.309 Sum_probs=71.1
Q ss_pred cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHH
Q 024107 162 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSK 239 (272)
Q Consensus 162 ~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~ 239 (272)
..++.||++||++|+.+.|.+.++++.+.+ ++.+..+|++.+ ++ .++++.++|++++ +|+. ++.|..+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~----~~~G~~~~~ 74 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV----RFVGAPSRE 74 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE----EEECSSCCH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE----EEccCCCHH
Confidence 358999999999999999999999999987 799999999998 66 4899999999998 5542 688988999
Q ss_pred HHHHHHHHHc
Q 024107 240 NIAAFIKEQL 249 (272)
Q Consensus 240 ~l~~~i~~~~ 249 (272)
.|.++|++.+
T Consensus 75 ~l~~~l~~~l 84 (85)
T 1nho_A 75 ELFEAINDEM 84 (85)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 186
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.50 E-value=2.5e-14 Score=106.55 Aligned_cols=104 Identities=6% Similarity=0.019 Sum_probs=78.3
Q ss_pred ceEeeCcccccccccCCcceEEEEEEcc---cchHHHHHHHHHHHHHhcCceE--EEEEeCCCcccchhHHhhcCCCCCC
Q 024107 15 LVTKLTDINSASVHSSPIKLQVYVFAKA---DDLKSLLEPLEDIARNFKGKIM--FTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~~~~~~~v~fy~~~---~~c~~~~~~~~~~a~~~~~~i~--~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
-+..++.++|++.+..+..++|.|++.| ++|+.+.|.|.++++++ +++. |+.||++.+ ++++++|||.++
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~---~~la~~~~V~~i- 92 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQS---EAIGDRFNVRRF- 92 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHH---HHHHHTTTCCSS-
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCC---HHHHHhcCCCcC-
Confidence 5778899999999887777888888765 79999999999999999 7788 999999998 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
||+ .+|.+|. ...++.|..+.+.|.+|+.+.+..
T Consensus 93 PT~-~~fk~G~-~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 93 PAT-LVFTDGK-LRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp SEE-EEESCC-----CEESCCCHHHHHHHHHHHHC-
T ss_pred CeE-EEEeCCE-EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999 7886554 334458899999999999998764
No 187
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.49 E-value=4.3e-14 Score=102.77 Aligned_cols=99 Identities=20% Similarity=0.297 Sum_probs=79.5
Q ss_pred eEEecccchhHHhhc-CCCcEEEEEECC-------CChhHHHhHHHHHHHHHHhcCCCceEEEEEeC-------CCC-CC
Q 024107 144 VQIVVGKTFDDLVLN-SHKDVLLEVYTP-------WCVTCETTSKQIEKLAKHFKGLDNLVIAKIDA-------SAN-EH 207 (272)
Q Consensus 144 v~~l~~~~~~~~v~~-~~~~~lv~f~~~-------~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~-------~~~-~~ 207 (272)
+...+.++|.+.+.. .+++++|+||++ ||++|+.+.|.+.++++.+.+ ++.|+.+|+ +.+ ++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCchhhhchhHHH
Confidence 455677889988865 589999999999 999999999999999999876 799999999 555 45
Q ss_pred C-CCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHH
Q 024107 208 P-KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE 247 (272)
Q Consensus 208 ~-~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 247 (272)
. +++|.++||+++|+++.... .+. ..+.+.|.+||.+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~~--g~~-~~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKLV--ESE-CLQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEEE--GGG-GGCHHHHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCceEe--ccc-cCCHHHHHHHHhc
Confidence 3 68999999999998744221 122 2567889888874
No 188
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.49 E-value=1.3e-13 Score=100.31 Aligned_cols=102 Identities=13% Similarity=0.070 Sum_probs=85.8
Q ss_pred CceEee-Cccccccccc----CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 14 PLVTKL-TDINSASVHS----SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 14 ~~v~~l-~~~~f~~~~~----~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
..+.++ +.++|++.+. ++++++|.||++| ++|+.+.|.|.++++.+. .+.|+.+|++.. ++++++|||.+
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~---~~l~~~~~v~~ 91 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDEL---KSVASDWAIQA 91 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTS---HHHHHHTTCCS
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccC---HHHHHHcCCCc
Confidence 346666 6788888775 4789999999999 999999999999999997 599999999998 89999999999
Q ss_pred CCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 88 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
+ ||+ .++.++. ....+.| .+.+.|.+++.+.+
T Consensus 92 ~-Pt~-~~~~~G~-~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 92 M-PTF-MFLKEGK-ILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp S-SEE-EEEETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred c-CEE-EEEECCE-EEEEEeC-CCHHHHHHHHHHhc
Confidence 9 999 7776554 3334466 58999999998864
No 189
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.49 E-value=3.2e-14 Score=104.99 Aligned_cols=104 Identities=21% Similarity=0.474 Sum_probs=81.1
Q ss_pred eEEec-ccchhHHhhc-CCCcEEEEEECCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCCC-----CC-CCCcc
Q 024107 144 VQIVV-GKTFDDLVLN-SHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASAN-----EH-PKLQV 212 (272)
Q Consensus 144 v~~l~-~~~~~~~v~~-~~~~~lv~f~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~~-----~~-~~~~v 212 (272)
+..+. .+++...+.. .+++++|+||++||++|+.+.+.+ .++++.+. ++.++.+|++.+ ++ .++++
T Consensus 13 f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~~~~~~~l~~~~~v 89 (134)
T 2fwh_A 13 FTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTANDAQDVALLKHLNV 89 (134)
T ss_dssp CEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTCCHHHHHHHHHTTC
T ss_pred cEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCCcchHHHHHHHcCC
Confidence 34343 3567666643 378999999999999999999999 89998886 499999999653 33 37899
Q ss_pred cCCCeEEEE-eCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 213 EEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 213 ~~~P~l~~~-~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
.++|++++| ++|+.+...++.|..+.+.|.++|++.-.
T Consensus 90 ~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 90 LGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp CSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred CCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 999999999 66665411379999999999999987644
No 190
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.48 E-value=1.1e-13 Score=103.23 Aligned_cols=101 Identities=15% Similarity=0.112 Sum_probs=83.9
Q ss_pred Ccccccccc-c-CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEE
Q 024107 20 TDINSASVH-S-SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAF 96 (272)
Q Consensus 20 ~~~~f~~~~-~-~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~ 96 (272)
+.++|+..+ . ++++++|.||++| ++|+.+.|.|.++++.+.+++.|+.||++.+ ++++++|||.++ ||+ .++
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~---~~~~~~~~i~~~-Pt~-~~~ 84 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEV---PDFNKMYELYDP-CTV-MFF 84 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTC---CTTTTSSCSCSS-CEE-EEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccC---HHHHHHcCCCCC-CEE-EEE
Confidence 567787644 3 5789999999999 9999999999999999988899999999998 899999999999 999 788
Q ss_pred eCCcceee--------cCCCCC-ChHHHHHHHHHHhcC
Q 024107 97 DNKAISKF--------LLESDL-TPSNIEEFCSRLLHG 125 (272)
Q Consensus 97 ~~~~~~~~--------~~~g~~-~~~~i~~fi~~~~~~ 125 (272)
.+++.... .+.|.. +.+.+.+++.+.+.+
T Consensus 85 ~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 85 FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 76643321 234555 489999999998765
No 191
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.48 E-value=6.2e-14 Score=103.63 Aligned_cols=103 Identities=11% Similarity=0.008 Sum_probs=89.0
Q ss_pred CCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeC---------CCcccchhHHhh
Q 024107 13 FPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI---------ADEDLAKPFLTL 82 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~---------~~~~~~~~l~~~ 82 (272)
...+..++.++|++.+.+ +++|.||++| ++|+.+.|.|.++++.+. +.|+.||+ +.. ++++++
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~---~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAA---RLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHH---HHHHHH
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhh---HHHHHH
Confidence 346788899999998876 9999999999 999999999999999987 99999999 666 899999
Q ss_pred cCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 83 FGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 83 ~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
|||.++ ||+ .++.+|. ....+.|..+.+.+.+++++.+++
T Consensus 88 ~~v~~~-Pt~-~~~~~G~-~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 88 AGVEGT-PTL-VFYKEGR-IVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HTCCSS-SEE-EEEETTE-EEEEEESCCCHHHHHHHHHHHC--
T ss_pred cCCcee-CeE-EEEcCCE-EEEEEeCCCCHHHHHHHHHHHhCC
Confidence 999999 999 7888554 344568999999999999998764
No 192
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=9.2e-15 Score=108.33 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=85.3
Q ss_pred CCCceEeeCcccccccccCCc--ceEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcccchhHHhhcCCC-
Q 024107 12 KFPLVTKLTDINSASVHSSPI--KLQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDLAKPFLTLFGLE- 86 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~~~~--~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~~~~~l~~~~~i~- 86 (272)
+...+..++.++|.+.+..++ +++|+||++| ++|+.+.|.|.++++.+.+ .+.|+.||++.. ++++++|+|.
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~ 81 (137)
T 2dj0_A 5 SSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY---TDVSTRYKVST 81 (137)
T ss_dssp CCSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC---HHHHHHTTCCC
T ss_pred CCceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC---HHHHHHccCcc
Confidence 455788999999999775554 8899999999 9999999999999999986 799999999998 8999999999
Q ss_pred -----CCCceEEEEEeCCcceeecCCCCCChHHHHHHHHH
Q 024107 87 -----ESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSR 121 (272)
Q Consensus 87 -----~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 121 (272)
++ ||+ .++.++. ....+.|..+.+.|.+|+.+
T Consensus 82 ~~~~~~~-Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 82 SPLTKQL-PTL-ILFQGGK-EAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp CSSSSCS-SEE-EEESSSS-EEEEESCBCSSSCBCCCCCC
T ss_pred cCCcCCC-CEE-EEEECCE-EEEEecCcCchHHHHHHHhc
Confidence 99 999 7776554 33334676666666555544
No 193
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.48 E-value=1e-13 Score=106.75 Aligned_cols=100 Identities=17% Similarity=0.254 Sum_probs=79.3
Q ss_pred ecccchhHHhh---cCCCcEEEEEECCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCCCC-C------------
Q 024107 147 VVGKTFDDLVL---NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASANE-H------------ 207 (272)
Q Consensus 147 l~~~~~~~~v~---~~~~~~lv~f~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~~~-~------------ 207 (272)
.+..+|.+.+. ..+++++|.||++||++|+.+.+.+ ..+.+.++. ++.++.+|++.+. +
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcchh
Confidence 45667777663 4589999999999999999985554 666666665 6999999998773 3
Q ss_pred ---------------CCCcccCCCeEEEE-eCCCCcCceEeeCCCC-HHHHHHHHHHHcC
Q 024107 208 ---------------PKLQVEEYPTLLFY-PAGDKANPIKVSARSS-SKNIAAFIKEQLK 250 (272)
Q Consensus 208 ---------------~~~~v~~~P~l~~~-~~~~~~~~~~~~g~~~-~~~l~~~i~~~~~ 250 (272)
..+++.++|+++++ ++|+.+. ++.|..+ .+.|.++|++.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~--~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLN--KSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSS--CCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEe--eccCCCCCHHHHHHHHHHHHH
Confidence 35789999999999 6666554 6779888 9999999998764
No 194
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.48 E-value=6.3e-14 Score=100.44 Aligned_cols=100 Identities=14% Similarity=0.120 Sum_probs=83.3
Q ss_pred CceEeeCc-ccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCce
Q 024107 14 PLVTKLTD-INSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNT 91 (272)
Q Consensus 14 ~~v~~l~~-~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~ 91 (272)
+.+.++++ ++|++.+.++++++|.||++| ++|+++.|.|.++++.+.+ +.|+.||++.. ++++++|+|.++ ||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~---~~l~~~~~v~~~-Pt 86 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDES---PDIAKECEVTAM-PT 86 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTC---HHHHHHTTCCSB-SE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCC---HHHHHHCCCCcc-cE
Confidence 34555544 556778888899999999999 9999999999999999988 99999999998 899999999999 99
Q ss_pred EEEEEeCCcceeecCCCCCChHHHHHHHHH
Q 024107 92 VVTAFDNKAISKFLLESDLTPSNIEEFCSR 121 (272)
Q Consensus 92 i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 121 (272)
+ .++.++. ....+.|.. .+.|.+++++
T Consensus 87 ~-~~~~~G~-~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 87 F-VLGKDGQ-LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp E-EEEETTE-EEEEEESSC-HHHHHHHHHT
T ss_pred E-EEEeCCe-EEEEEeCCC-HHHHHHHHHh
Confidence 9 6776554 333457777 8899988864
No 195
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.47 E-value=1.5e-13 Score=97.98 Aligned_cols=102 Identities=13% Similarity=0.072 Sum_probs=85.6
Q ss_pred ceEee-CcccccccccC----CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCC
Q 024107 15 LVTKL-TDINSASVHSS----PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEES 88 (272)
Q Consensus 15 ~v~~l-~~~~f~~~~~~----~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~ 88 (272)
.+..+ +.++|.+.+.. +++++|+||++| ++|+.+.|.+.++++.+. .+.|+.+|++.. ++++++||+.++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~---~~~~~~~~v~~~ 80 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDEL---KAVAEEWNVEAM 80 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTC---HHHHHHHHCSST
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcccc---HHHHHhCCCCcc
Confidence 34555 77889887754 789999999999 999999999999999997 499999999998 899999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
||+ .++.++. ....+.| .+.+.+.+++.++++
T Consensus 81 -Pt~-~~~~~G~-~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 81 -PTF-IFLKDGK-LVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp -TEE-EEEETTE-EEEEEEC-CCTTHHHHHHHHHHH
T ss_pred -cEE-EEEeCCE-EEEEEec-CCHHHHHHHHHHhhc
Confidence 999 7776554 3333466 688999999998764
No 196
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.47 E-value=5.3e-14 Score=101.36 Aligned_cols=106 Identities=10% Similarity=0.182 Sum_probs=83.6
Q ss_pred CCCceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc-ccchhHHhhcCCCCCC
Q 024107 12 KFPLVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE-DLAKPFLTLFGLEESK 89 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~-~~~~~l~~~~~i~~~~ 89 (272)
....+..++.++|.+.+.++++++|+||++| ++|+++.|.|.++++.+...+.++.++.... +....++++|||.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~- 88 (118)
T 1zma_A 10 NIKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTV- 88 (118)
T ss_dssp HTTTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSS-
T ss_pred HHhhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCC-
Confidence 4556788899999998888889999999999 9999999999999999876565553332210 001589999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHH
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCS 120 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~ 120 (272)
||+ .++.+|+ ....+.|..+.+.|.+|+.
T Consensus 89 Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 89 PGF-VHITDGQ-INVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CEE-EEEETTE-EEEECCTTCCHHHHHHHHT
T ss_pred CeE-EEEECCE-EEEEecCCCCHHHHHHHhh
Confidence 999 7777554 3345689999999999875
No 197
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.47 E-value=1.6e-13 Score=110.26 Aligned_cols=115 Identities=12% Similarity=0.054 Sum_probs=94.5
Q ss_pred hHHHHHhhcC--CCceEeeCcccccccccCCcce-EEEEEEcc-cchHHHHHHHHHHHHHhc----CceEEEEEeCCCcc
Q 024107 3 KILQFLNYNK--FPLVTKLTDINSASVHSSPIKL-QVYVFAKA-DDLKSLLEPLEDIARNFK----GKIMFTAVDIADED 74 (272)
Q Consensus 3 ~l~~fi~~~s--~~~v~~l~~~~f~~~~~~~~~~-~v~fy~~~-~~c~~~~~~~~~~a~~~~----~~i~~~~vd~~~~~ 74 (272)
++.+|+.... ......+++++++.+...++++ +|.||++| ++|+++.|.|.+++..+. +.+.|+.||++.+
T Consensus 103 ~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~- 181 (226)
T 1a8l_A 103 EFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY- 181 (226)
T ss_dssp HHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC-
T ss_pred HHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC-
Confidence 4566665522 1235567888888877666677 99999999 999999999999999997 5799999999998
Q ss_pred cchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 75 LAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 75 ~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
++++++|||.++ ||+ .++.++. ....+.|..+.+.|.+|+.+.+
T Consensus 182 --~~l~~~~~v~~~-Pt~-~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 182 --PEWADQYNVMAV-PKI-VIQVNGE-DRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp --HHHHHHTTCCSS-CEE-EEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred --HHHHHhCCCccc-CeE-EEEeCCc-eeEEEcCCCCHHHHHHHHHHhh
Confidence 899999999999 999 7877654 3345689999999999998865
No 198
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.47 E-value=1.6e-13 Score=101.77 Aligned_cols=103 Identities=11% Similarity=0.108 Sum_probs=86.2
Q ss_pred ceEeeCccccccccc----CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 15 LVTKLTDINSASVHS----SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~----~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
.+...+.++|.+.+. ++++++|.||++| ++|+.+.|.|.++++.+.+ +.|+.||++.. ++++++|||.++
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~-v~~~~v~~~~~---~~~~~~~~v~~~- 100 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPS-LMFLVIDVDEL---SDFSASWEIKAT- 100 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTS---HHHHHHTTCCEE-
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEeCccc---HHHHHHcCCCcc-
Confidence 344445788988763 5789999999999 9999999999999999964 99999999998 899999999999
Q ss_pred ceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 90 NTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 90 P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
||+ .++.+|. ....+.|. +.+.|.+++.+.+++
T Consensus 101 Pt~-~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 101 PTF-FFLRDGQ-QVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp SEE-EEEETTE-EEEEEESC-CHHHHHHHHHHHHHT
T ss_pred cEE-EEEcCCe-EEEEEeCC-CHHHHHHHHHHHhcc
Confidence 999 6776553 33445676 899999999998865
No 199
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.45 E-value=3.3e-13 Score=96.90 Aligned_cols=103 Identities=13% Similarity=0.072 Sum_probs=86.8
Q ss_pred CceEee-CcccccccccC----CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 14 PLVTKL-TDINSASVHSS----PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 14 ~~v~~l-~~~~f~~~~~~----~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
+.+..+ +.++|++.+.. +++++|.||++| ++|+.+.|.|.++++.+. .+.|+.+|++.. +.++++||+.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~---~~~~~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDEL---KDVAEAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTS---HHHHHHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccC---HHHHHHcCCCc
Confidence 345556 67889887754 789999999999 999999999999999998 499999999998 89999999999
Q ss_pred CCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 88 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+ ||+ .++.++.. ...+.| .+.+.+.+++.+.++
T Consensus 82 ~-Pt~-~~~~~g~~-~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 82 M-PTF-LFIKDGEK-VDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp B-SEE-EEEETTEE-EEEEES-CCHHHHHHHHHHHHC
T ss_pred C-cEE-EEEeCCeE-EEEecC-CCHHHHHHHHHHHhc
Confidence 9 999 77765543 333466 589999999999875
No 200
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.45 E-value=1e-13 Score=97.39 Aligned_cols=97 Identities=11% Similarity=0.139 Sum_probs=79.5
Q ss_pred CeEEecc-cchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C----CC-CCcccC-
Q 024107 143 NVQIVVG-KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E----HP-KLQVEE- 214 (272)
Q Consensus 143 ~v~~l~~-~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~----~~-~~~v~~- 214 (272)
.+..+++ ++|++.+. .+++++|+|+|+||++|+.+.|.+++++.. . ++.++.+|.+++ + ++ +++|.+
T Consensus 7 ~~~~i~s~e~f~~ii~-~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~--~v~~~~vdVde~r~~Sn~IA~~~~V~h~ 81 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIE-ENKYVFVLKHSETCPISANAYDQFNKFLYE--R--DMDGYYLIVQQERDLSDYIAKKTNVKHE 81 (112)
T ss_dssp CEEECCSHHHHHHHHH-HCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H--TCCEEEEEGGGGHHHHHHHHHHHTCCCC
T ss_pred ceeecCCHHHHHHHHh-cCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C--CceEEEEEeecCchhhHHHHHHhCCccC
Confidence 4566655 66888764 489999999999999999999999999984 3 799999999998 5 43 889995
Q ss_pred CCeEEEEeCCCCcCceEeeCCCCHHHHHHHH
Q 024107 215 YPTLLFYPAGDKANPIKVSARSSSKNIAAFI 245 (272)
Q Consensus 215 ~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i 245 (272)
.|++++|++|+.+- -...+..+.+.|.+.+
T Consensus 82 sPq~il~k~G~~v~-~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 82 SPQAFYFVNGEMVW-NRDHGDINVSSLAQAE 111 (112)
T ss_dssp SSEEEEEETTEEEE-EEEGGGCSHHHHHHHT
T ss_pred CCeEEEEECCEEEE-EeeccccCHHHHHHhh
Confidence 99999999998763 1366788888887654
No 201
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.45 E-value=5.7e-12 Score=102.88 Aligned_cols=206 Identities=11% Similarity=0.081 Sum_probs=151.9
Q ss_pred CCCceEeeCc-ccccccccC-CcceEEEEEEcccchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 12 KFPLVTKLTD-INSASVHSS-PIKLQVYVFAKADDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 12 s~~~v~~l~~-~~f~~~~~~-~~~~~v~fy~~~~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
+.|.+.+++. ++++++++. ...++|.||.++ |....+.|.++|..+++.+.|+... . .++++++++++
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~--~~~~~~~F~~~A~~lr~~~~F~~t~---~---~~v~~~~~v~~-- 73 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGDDVVILGVFQGV--GDPGYLQYQDAANTLREDYKFHHTF---S---TEIAKFLKVSL-- 73 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCSSCEEEEECSCT--TCHHHHHHHHHHHHHTTTCCEEEEC---C---HHHHHHHTCCS--
T ss_pred CCCCceecCCHHHHHHHHhcCCCeEEEEEEcCC--CchHHHHHHHHHHhhhcCcEEEEEC---c---HHHHHHcCCCC--
Confidence 5688888865 778888877 778899999876 5567788999999999889999853 3 57899999976
Q ss_pred ceEEEEEeCC------cceeecCC--CCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCC
Q 024107 90 NTVVTAFDNK------AISKFLLE--SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHK 161 (272)
Q Consensus 90 P~i~~~~~~~------~~~~~~~~--g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~ 161 (272)
|+| .+|.++ ......|. |..+.+.|.+|+....- ..+..++.+++.... .++
T Consensus 74 p~i-vlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~-----------------Plv~e~t~~n~~~~~--~~~ 133 (250)
T 3ec3_A 74 GKL-VLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHAL-----------------PLVGHRKTSNDAKRY--SKR 133 (250)
T ss_dssp SEE-EEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSS-----------------CTEEEECTTTHHHHS--CSS
T ss_pred CeE-EEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCC-----------------CceeecCccchhhhh--ccC
Confidence 999 778652 12233346 57899999999999632 258899999988865 367
Q ss_pred cEEEEEECCC-C---h-hHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCccc--CC-CeEEEEeCCCCcCceE
Q 024107 162 DVLLEVYTPW-C---V-TCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVE--EY-PTLLFYPAGDKANPIK 231 (272)
Q Consensus 162 ~~lv~f~~~~-C---~-~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~--~~-P~l~~~~~~~~~~~~~ 231 (272)
+.++.|+.+. + . ........+.++|+.++ ++.|+.+|...+ .. ..+++. +. |.++++..++. ...
T Consensus 134 ~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k---ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~--ky~ 208 (250)
T 3ec3_A 134 PLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP---EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGK--KFA 208 (250)
T ss_dssp SEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT---TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSC--EEE
T ss_pred ccEEEEEecccccccchhHHHHHHHHHHHHHhhc---ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCc--eec
Confidence 7777777532 2 2 34557888999999998 599999999877 22 355665 34 47777754322 223
Q ss_pred ee-CCCCHHHHHHHHHHHcCcC
Q 024107 232 VS-ARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 232 ~~-g~~~~~~l~~~i~~~~~~~ 252 (272)
+. +..+.+.|.+|+.+.+.-+
T Consensus 209 ~~~~~~t~~~i~~Fv~~~~~Gk 230 (250)
T 3ec3_A 209 MEPEEFDSDALREFVMAFKKGK 230 (250)
T ss_dssp CCCCSCCHHHHHHHHHHHHTTC
T ss_pred CCcccCCHHHHHHHHHHHHCCC
Confidence 33 5689999999999988654
No 202
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.16 E-value=8.4e-15 Score=103.04 Aligned_cols=101 Identities=18% Similarity=0.226 Sum_probs=86.5
Q ss_pred eEeeCcccccccc-cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEE
Q 024107 16 VTKLTDINSASVH-SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVV 93 (272)
Q Consensus 16 v~~l~~~~f~~~~-~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~ 93 (272)
+.+++.++|.+.+ .++++++|.||++| ++|+.+.|.+.++++.+.+.+.|+.+|++.. .+++++||+.++ |++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~v~~~-Pt~- 77 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDEN---PNTAAQYGIRSI-PTL- 77 (106)
Confidence 5678888998644 67789999999999 9999999999999999997899999999988 899999999999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
.++.+++ ....+.|..+.+.+.+|+.+.
T Consensus 78 ~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 78 LLFKNGQ-VVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 6775443 344557888889999988764
No 203
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.44 E-value=3.3e-13 Score=97.29 Aligned_cols=104 Identities=15% Similarity=0.128 Sum_probs=83.3
Q ss_pred CceEee--Ccccccc-cccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 14 PLVTKL--TDINSAS-VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 14 ~~v~~l--~~~~f~~-~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
+.+..+ +.++|.+ +..++++++|.||++| ++|+.+.|.|.++++.+ +.+.|+.||++.. ++++++|+|.++
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~---~~~~~~~~i~~~- 77 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKN---GNAADAYGVSSI- 77 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTC---HHHHHHTTCCSS-
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCC---HHHHHhcCCCCC-
Confidence 446666 5778874 5567889999999999 99999999999999999 6699999999998 899999999999
Q ss_pred ceEEEEEeCC---cceeecCCCCCChHHHHHHHHHHhc
Q 024107 90 NTVVTAFDNK---AISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 90 P~i~~~~~~~---~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
||+ .+++++ +.....+.|.. .++|.+.+.++..
T Consensus 78 Pt~-~~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~~ 113 (118)
T 2f51_A 78 PAL-FFVKKEGNEIKTLDQFVGAD-VSRIKADIEKFKH 113 (118)
T ss_dssp SEE-EEEEEETTEEEEEEEEESCC-HHHHHHHHHHHC-
T ss_pred CEE-EEEeCCCCcceEEEeecCCC-HHHHHHHHHHhhh
Confidence 999 777651 12233446654 5569999988753
No 204
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.43 E-value=2.1e-13 Score=100.53 Aligned_cols=105 Identities=11% Similarity=0.081 Sum_probs=86.0
Q ss_pred CCCceEeeCc-ccccccccC--CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 12 KFPLVTKLTD-INSASVHSS--PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 12 s~~~v~~l~~-~~f~~~~~~--~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
+...+.+++. ++|.+.+.. +++++|.||++| ++|+.+.|.|.++++.+ .+.|+.||++.. .+++++|||.+
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~---~~l~~~~~v~~ 92 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIH---PKLNDQHNIKA 92 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTC---HHHHHHTTCCS
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccch---HHHHHhcCCCC
Confidence 4455777765 788887754 468999999999 99999999999999888 499999999998 89999999999
Q ss_pred CCceEEEEEe--CCcc-eeecCCCCCChHHHHHHHHHHhc
Q 024107 88 SKNTVVTAFD--NKAI-SKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 88 ~~P~i~~~~~--~~~~-~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+ ||+ .++. ++++ ....+.|. +.+.|.+++.+.+.
T Consensus 93 ~-Pt~-~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 93 L-PTF-EFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp S-SEE-EEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred C-CEE-EEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9 999 7774 4432 33445676 89999999999864
No 205
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=4.8e-13 Score=97.88 Aligned_cols=107 Identities=10% Similarity=0.067 Sum_probs=87.7
Q ss_pred eEeeCcccccccc----cCCcceEEEEEEcc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 16 VTKLTDINSASVH----SSPIKLQVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 16 v~~l~~~~f~~~~----~~~~~~~v~fy~~~-~~c~~~~~~~---~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
...++..+|.+.+ .++++++|.||++| ++|+.+.|.+ .++++.+...+.++.+|++...+ ..++++|||.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~~~v~~ 86 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEG-VELRKKYGVHA 86 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTH-HHHHHHTTCCS
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcch-HHHHHHcCCCC
Confidence 4455778888766 36789999999999 9999999999 78888777779999999984211 79999999999
Q ss_pred CCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 88 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+ ||+ .+++.++...+.+.|..+.+.|.+|+++.+.+
T Consensus 87 ~-Pt~-~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 87 Y-PTL-LFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp S-CEE-EEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred C-CEE-EEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 9 999 78864444455568899999999999998764
No 206
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.13 E-value=1.7e-14 Score=105.78 Aligned_cols=91 Identities=13% Similarity=0.284 Sum_probs=76.4
Q ss_pred cCCCcEEEEEECCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCC--C-CC-CCCcccCCCeEEEE--eCCCC--
Q 024107 158 NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASA--N-EH-PKLQVEEYPTLLFY--PAGDK-- 226 (272)
Q Consensus 158 ~~~~~~lv~f~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~--~-~~-~~~~v~~~P~l~~~--~~~~~-- 226 (272)
..+++++|+||++||++|+.+.|.+ .++++.+.+ ++.++.+|++. + ++ .++++.++|++++| .+|+.
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 4578999999999999999999999 889888876 79999999953 3 45 48899999999999 45654
Q ss_pred cCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 227 ANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 227 ~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
.. ++.|..+.+.|.++|++.++..
T Consensus 95 ~~--~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 95 VG--RLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 33 6889999999999999988654
No 207
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.41 E-value=1.5e-13 Score=120.42 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=85.4
Q ss_pred CCceEeeCcccccccccCC--cceEEEEEEcc-cchHHHHHHHHHHHHHhc---C-----ceEEEEEeCCCcccchhHHh
Q 024107 13 FPLVTKLTDINSASVHSSP--IKLQVYVFAKA-DDLKSLLEPLEDIARNFK---G-----KIMFTAVDIADEDLAKPFLT 81 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~~--~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~---~-----~i~~~~vd~~~~~~~~~l~~ 81 (272)
.+.+.+++.++|++.+... ++++|.||++| ++|+.+.|.|.++++.+. + .+.|+.|||+.+ +++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~---~~la~ 98 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE---VDLCR 98 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC---HHHHH
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC---HHHHH
Confidence 3468899999999988654 78999999999 999999999999999997 2 599999999999 89999
Q ss_pred hcCCCCCCceEEEEEeCCc-ceeecCCCCC------------ChHHHHHHHHHHhc
Q 024107 82 LFGLEESKNTVVTAFDNKA-ISKFLLESDL------------TPSNIEEFCSRLLH 124 (272)
Q Consensus 82 ~~~i~~~~P~i~~~~~~~~-~~~~~~~g~~------------~~~~i~~fi~~~~~ 124 (272)
+|+|.++ ||+ .+|.+++ .....|.|.+ +.+++...+..+++
T Consensus 99 ~y~V~~~-PTl-ilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Lin 152 (470)
T 3qcp_A 99 KYDINFV-PRL-FFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVN 152 (470)
T ss_dssp HTTCCSS-CEE-EEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHH
T ss_pred HcCCCcc-CeE-EEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 9999999 999 7775443 2334456654 44455555555543
No 208
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.40 E-value=8.7e-13 Score=106.20 Aligned_cols=113 Identities=10% Similarity=0.003 Sum_probs=93.6
Q ss_pred hhHHHHHhhcC--CCceEeeCcccccccccCCcce-EEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccch
Q 024107 2 DKILQFLNYNK--FPLVTKLTDINSASVHSSPIKL-QVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAK 77 (272)
Q Consensus 2 ~~l~~fi~~~s--~~~v~~l~~~~f~~~~~~~~~~-~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~ 77 (272)
+++.+|+.... ...+..+++++|+.+...++++ ++.||++| ++|+++.|.|.+++..+ +.+.|+.||++.. +
T Consensus 104 ~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~---~ 179 (229)
T 2ywm_A 104 LEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASEN---Q 179 (229)
T ss_dssp THHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGC---H
T ss_pred HHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCC---H
Confidence 45677776632 2456788999999887666666 77899999 99999999999999999 4699999999998 8
Q ss_pred hHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 78 PFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 78 ~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+++++|||.++ ||+ .+ ++. ...+.|..+.+.|.+|+.+.++
T Consensus 180 ~l~~~~~v~~~-Pt~-~~--~G~--~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 180 DLAEQFQVVGV-PKI-VI--NKG--VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp HHHHHTTCCSS-SEE-EE--GGG--TEEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCccc-CEE-EE--CCE--EEEeeCCCCHHHHHHHHHHHhh
Confidence 99999999999 999 56 333 3335899999999999999864
No 209
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.39 E-value=1.9e-12 Score=95.52 Aligned_cols=101 Identities=13% Similarity=0.085 Sum_probs=82.4
Q ss_pred CCCceEeeCcccccccccC---CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 12 KFPLVTKLTDINSASVHSS---PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 12 s~~~v~~l~~~~f~~~~~~---~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
....+.+++.++|.+.+.. +++++|+||++| ++|+.+.|.|.++++.+.+ +.|+.||++.. . ++|+|.+
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~-v~~~~vd~~~~---~---~~~~i~~ 80 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE-TKFVKAIVNSC---I---EHYHDNC 80 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS-EEEEEECCSSS---C---SSCCSSC
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-cEEEEEEhhcC---c---ccCCCCC
Confidence 3456888899999986643 368999999999 9999999999999999964 99999999987 4 7899999
Q ss_pred CCceEEEEEeCCcceeecCCCC-------CChHHHHHHHHHH
Q 024107 88 SKNTVVTAFDNKAISKFLLESD-------LTPSNIEEFCSRL 122 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~-------~~~~~i~~fi~~~ 122 (272)
+ ||+ .++.++... ..+.|. .+.+.|.+++.+.
T Consensus 81 ~-Pt~-~~~~~G~~v-~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 81 L-PTI-FVYKNGQIE-GKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp C-SEE-EEESSSSCS-EEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred C-CEE-EEEECCEEE-EEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9 999 788765432 222343 3789999999986
No 210
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.39 E-value=4.9e-13 Score=97.09 Aligned_cols=102 Identities=10% Similarity=0.034 Sum_probs=83.3
Q ss_pred CCceEeeCcccccccccC--CcceEEEEEEc-------c-cchHHHHHHHHHHHHHhcCceEEEEEeC-------CCccc
Q 024107 13 FPLVTKLTDINSASVHSS--PIKLQVYVFAK-------A-DDLKSLLEPLEDIARNFKGKIMFTAVDI-------ADEDL 75 (272)
Q Consensus 13 ~~~v~~l~~~~f~~~~~~--~~~~~v~fy~~-------~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~-------~~~~~ 75 (272)
...+...+.++|.+.+.. +++++|.||++ | ++|+.+.|.|.++++.+.+.+.|+.||+ +..
T Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~-- 81 (123)
T 1wou_A 4 YEEVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPN-- 81 (123)
T ss_dssp CEEEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTT--
T ss_pred ceeEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchh--
Confidence 455677788899887755 78999999999 9 9999999999999999987899999999 566
Q ss_pred chhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHH
Q 024107 76 AKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSR 121 (272)
Q Consensus 76 ~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 121 (272)
..++++|+|.++ ||+ .++.++. ....+. ..+.+.|.+|+.+
T Consensus 82 -~~~~~~~~i~~~-Pt~-~~~~~~~-~~~g~~-~~~~~~l~~~i~~ 122 (123)
T 1wou_A 82 -NDFRKNLKVTAV-PTL-LKYGTPQ-KLVESE-CLQANLVEMLFSE 122 (123)
T ss_dssp -CHHHHHHCCCSS-SEE-EETTSSC-EEEGGG-GGCHHHHHHHHHC
T ss_pred -HHHHHHCCCCee-CEE-EEEcCCc-eEeccc-cCCHHHHHHHHhc
Confidence 789999999999 999 7887632 222222 3567888888763
No 211
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.37 E-value=2.1e-12 Score=92.87 Aligned_cols=99 Identities=12% Similarity=0.131 Sum_probs=79.6
Q ss_pred CceEeeCccccccccc-CCc--ceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCC
Q 024107 14 PLVTKLTDINSASVHS-SPI--KLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESK 89 (272)
Q Consensus 14 ~~v~~l~~~~f~~~~~-~~~--~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~ 89 (272)
..+.+++.++|.+.+. +++ +++|.||++| ++|+.+.|.++++|+++.+ +.|+.||+++. .++|+|.+.
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~-v~f~kvd~d~~------~~~~~v~~~- 74 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE-TKFVKAIVNSC------IQHYHDNCL- 74 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT-SEEEEEEGGGT------STTCCGGGC-
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC-CEEEEEEhHHh------HHHCCCCCC-
Confidence 4577889999998654 333 8999999999 9999999999999999975 99999999875 389999999
Q ss_pred ceEEEEEeCCcce-eec-C---CC-CCChHHHHHHHHH
Q 024107 90 NTVVTAFDNKAIS-KFL-L---ES-DLTPSNIEEFCSR 121 (272)
Q Consensus 90 P~i~~~~~~~~~~-~~~-~---~g-~~~~~~i~~fi~~ 121 (272)
||+ .+|.+++.. ++. + .| ..+.+.|..++.+
T Consensus 75 PT~-~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 75 PTI-FVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp SEE-EEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred CEE-EEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999 788776532 221 1 11 3688999999877
No 212
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.37 E-value=1.5e-12 Score=98.36 Aligned_cols=88 Identities=20% Similarity=0.392 Sum_probs=72.8
Q ss_pred CCCcEEEEEE-CCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCCCC------------C-CCCcccCCCeEEEE
Q 024107 159 SHKDVLLEVY-TPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASANE------------H-PKLQVEEYPTLLFY 221 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~~~------------~-~~~~v~~~P~l~~~ 221 (272)
.+++++|+|| ++||++|+.+.|.+ .++++.+.. ++.++.+|++... + ..|+|.++|+++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEE
Confidence 4789999999 99999999999999 777776654 7999999998753 3 36899999999999
Q ss_pred -eCCCCcCceEeeCCC--CHHHHHHHHHHHcCc
Q 024107 222 -PAGDKANPIKVSARS--SSKNIAAFIKEQLKE 251 (272)
Q Consensus 222 -~~~~~~~~~~~~g~~--~~~~l~~~i~~~~~~ 251 (272)
++|+.+. ++ |.. +.+.|.++|++.++.
T Consensus 124 d~~G~~~~--~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 124 DAEGKQLA--RM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp CTTCCEEE--EE-CCCTTCHHHHHHHHHHHHTC
T ss_pred cCCCCEEE--Ee-cCCCCCHHHHHHHHHHHHhc
Confidence 5565443 56 887 899999999988763
No 213
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.37 E-value=8.1e-12 Score=112.55 Aligned_cols=177 Identities=12% Similarity=0.107 Sum_probs=129.2
Q ss_pred cceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCC
Q 024107 32 IKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL 110 (272)
Q Consensus 32 ~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~ 110 (272)
.++.+.+|.+. +.|+++...+++++..- ++|.+...+ .. . ... |++ .+...+......|.|-.
T Consensus 19 ~~v~l~~~~~~~~~~~~~~~~~~~~~~~s-~~i~~~~~~--~~----~-------~~~-p~~-~~~~~~~~~~i~f~g~p 82 (521)
T 1hyu_A 19 KPVELIATLDDSAKSAEIKELLAEIAELS-DKVTFKEDN--TL----P-------VRK-PSF-LITNPGSQQGPRFAGSP 82 (521)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHTTC-TTEEEEECT--TS----S-------SCS-SEE-EEECTTCCCSCEEESCC
T ss_pred CCEEEEEEeCCCcchHHHHHHHHHHHHhC-CceEEEEcC--Cc----c-------cCC-CEE-EEecCCCcceEEEeccC
Confidence 45666677777 88999999999997664 467764321 11 1 455 999 77765544455567777
Q ss_pred ChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhc
Q 024107 111 TPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFK 190 (272)
Q Consensus 111 ~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~ 190 (272)
.-.++..|+..++.-. . .-..++.+.++..........++.||++||++|+.+.|.+.+++..+.
T Consensus 83 ~g~e~~s~~~~l~~~~------~---------~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~ 147 (521)
T 1hyu_A 83 LGHEFTSLVLALLWTG------G---------HPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP 147 (521)
T ss_dssp CGGGHHHHHHHHHHHT------T---------CCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT
T ss_pred cchhHHHHHHHHHhhc------C---------CCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC
Confidence 7778888888875411 1 112345555665543345677999999999999999999999998875
Q ss_pred CCCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 191 GLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 191 ~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
++.+..+|.+.+ ++ .++++.++|++++ +|+.+ ..|..+.+.|.+|+.+.
T Consensus 148 ---~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g~~~----~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 148 ---RIKHTAIDGGTFQNEITERNVMGVPAVFV--NGKEF----GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp ---TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE----EESCCCHHHHHHHHCCS
T ss_pred ---ceEEEEEechhhHHHHHHhCCCccCEEEE--CCEEE----ecCCCCHHHHHHHHhhc
Confidence 699999999998 66 4899999999977 66533 45889999999998654
No 214
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.37 E-value=2.5e-12 Score=86.61 Aligned_cols=81 Identities=9% Similarity=0.055 Sum_probs=71.5
Q ss_pred cceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCC
Q 024107 32 IKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL 110 (272)
Q Consensus 32 ~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~ 110 (272)
...++.||++| ++|+++.|.+.++++.+.+.+.|+.+|+++. ++++++||+.++ ||+ .+ ++. . .+.|..
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~--~G~--~-~~~G~~ 72 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMEN---PQKAMEYGIMAV-PTI-VI--NGD--V-EFIGAP 72 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSS---CCTTTSTTTCCS-SEE-EE--TTE--E-ECCSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCC---HHHHHHCCCccc-CEE-EE--CCE--E-eeecCC
Confidence 35789999999 9999999999999999997899999999988 799999999999 999 56 332 2 457888
Q ss_pred ChHHHHHHHHHH
Q 024107 111 TPSNIEEFCSRL 122 (272)
Q Consensus 111 ~~~~i~~fi~~~ 122 (272)
+.+.+.+++++.
T Consensus 73 ~~~~l~~~l~~~ 84 (85)
T 1fo5_A 73 TKEALVEAIKKR 84 (85)
T ss_dssp SSHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 999999999875
No 215
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.36 E-value=1.7e-12 Score=95.39 Aligned_cols=90 Identities=10% Similarity=0.160 Sum_probs=77.5
Q ss_pred cCCcceEEEEEEcc-cchHHHHHHHH--HHHHHhcCceEEEEEeC---CCcccchhHHhhcCC---CCCCceEEEEEeCC
Q 024107 29 SSPIKLQVYVFAKA-DDLKSLLEPLE--DIARNFKGKIMFTAVDI---ADEDLAKPFLTLFGL---EESKNTVVTAFDNK 99 (272)
Q Consensus 29 ~~~~~~~v~fy~~~-~~c~~~~~~~~--~~a~~~~~~i~~~~vd~---~~~~~~~~l~~~~~i---~~~~P~i~~~~~~~ 99 (272)
..+++++|.||++| ++|+.+.|.|. +++..+.+.+.|+.||+ +.. .+++++||| .++ ||+ .+++.+
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~---~~l~~~~~v~~~~~~-Pt~-~~~d~~ 101 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRN---LELSQAYGDPIQDGI-PAV-VVVNSD 101 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSS---HHHHHHTTCGGGGCS-SEE-EEECTT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccch---HHHHHHhCCccCCcc-ceE-EEECCC
Confidence 56789999999999 99999999999 99999977799999999 666 899999999 999 999 888655
Q ss_pred cceeecCCC-------CCChHHHHHHHHHHh
Q 024107 100 AISKFLLES-------DLTPSNIEEFCSRLL 123 (272)
Q Consensus 100 ~~~~~~~~g-------~~~~~~i~~fi~~~~ 123 (272)
+...+.+.| ..+.+.+.+|++++.
T Consensus 102 G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 102 GKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp SCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred CCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 445555566 578999999998863
No 216
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.35 E-value=3.5e-12 Score=95.63 Aligned_cols=90 Identities=10% Similarity=0.145 Sum_probs=64.1
Q ss_pred hcCCCcEEEEEECCCChhHHHhHHHHHHHH---HHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEEe-CCCCcCceE
Q 024107 157 LNSHKDVLLEVYTPWCVTCETTSKQIEKLA---KHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYP-AGDKANPIK 231 (272)
Q Consensus 157 ~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a---~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~~-~~~~~~~~~ 231 (272)
...+++++|+|||+||++|+.+.|.+.+.. ...+. ++..+.+|.+..+. ..+++.++||+++|. +|+.+. +
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~--~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~--~ 116 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN--KFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRA--D 116 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH--TCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCT--T
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc--CeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEE--E
Confidence 345899999999999999999999988643 22222 35555555332344 478999999999998 777665 5
Q ss_pred eeCC----------CCHHHHHHHHHHHcC
Q 024107 232 VSAR----------SSSKNIAAFIKEQLK 250 (272)
Q Consensus 232 ~~g~----------~~~~~l~~~i~~~~~ 250 (272)
..|. .+.+.+++.+++.+.
T Consensus 117 ~~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 117 IAGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp CCCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred EeCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 6776 445667777766554
No 217
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.35 E-value=2.1e-12 Score=95.19 Aligned_cols=107 Identities=7% Similarity=0.010 Sum_probs=83.4
Q ss_pred CceE-eeCcccccccccC--CcceEEEEEEcc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCc-ccchhHHhhcCC
Q 024107 14 PLVT-KLTDINSASVHSS--PIKLQVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADE-DLAKPFLTLFGL 85 (272)
Q Consensus 14 ~~v~-~l~~~~f~~~~~~--~~~~~v~fy~~~-~~c~~~~~~~---~~~a~~~~~~i~~~~vd~~~~-~~~~~l~~~~~i 85 (272)
|.+. ..+.+++...+.. +++++|.||++| ++|+++.+.+ .++++.+.+ +.|+.||++.. +....++++|||
T Consensus 11 ~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v 89 (134)
T 2fwh_A 11 LNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNV 89 (134)
T ss_dssp CCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTC
T ss_pred CCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCC
Confidence 3344 3355666665543 789999999999 9999999999 999999986 99999999531 111789999999
Q ss_pred CCCCceEEEEEeCCccee--ecCCCCCChHHHHHHHHHHh
Q 024107 86 EESKNTVVTAFDNKAISK--FLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 86 ~~~~P~i~~~~~~~~~~~--~~~~g~~~~~~i~~fi~~~~ 123 (272)
.++ ||+ .+++.++... +.+.|..+.+.|.+++.+.-
T Consensus 90 ~~~-Pt~-~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 90 LGL-PTI-LFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp CSS-SEE-EEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred CCC-CEE-EEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 999 999 7885443333 56789999999999998863
No 218
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.35 E-value=5.1e-13 Score=102.06 Aligned_cols=90 Identities=14% Similarity=0.304 Sum_probs=70.6
Q ss_pred cCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C-C-CCCcc--cCCCeEEEE-eCCCCcCceE
Q 024107 158 NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-H-PKLQV--EEYPTLLFY-PAGDKANPIK 231 (272)
Q Consensus 158 ~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~-~-~~~~v--~~~P~l~~~-~~~~~~~~~~ 231 (272)
..+++++|+||++||++|+.+.|.|.+++..+.. ++.|+.||++.+ + . ..+++ .++|++++| ++|+.+. +
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~--~ 119 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHP--E 119 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCT--T
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEE--E
Confidence 4589999999999999999999999998776654 456667777665 3 4 35666 679999999 6776654 5
Q ss_pred eeCC----------CCHHHHHHHHHHHcCc
Q 024107 232 VSAR----------SSSKNIAAFIKEQLKE 251 (272)
Q Consensus 232 ~~g~----------~~~~~l~~~i~~~~~~ 251 (272)
+.|. .+.+.|+++|++.+..
T Consensus 120 ~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 120 IINENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp CCCTTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred EeCCCCccchhcccCCHHHHHHHHHHHHHh
Confidence 6663 7889999999987754
No 219
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.35 E-value=9.9e-12 Score=92.53 Aligned_cols=103 Identities=13% Similarity=0.241 Sum_probs=82.0
Q ss_pred EEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC--------------------
Q 024107 145 QIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------- 204 (272)
Q Consensus 145 ~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------------------- 204 (272)
..++++.+.... ..+++++|+||++||++|+.+.+.+.++++.+.+ ++.++.++++.
T Consensus 15 ~~~~g~~~~~~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQL-IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD--QLNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhh-cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 566777665543 3578999999999999999999999999999987 59999998753
Q ss_pred -------C-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 205 -------N-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 205 -------~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
+ .+ ..+++.++|+++++..++.+ ..++.|..+.+.|.++|++.+..
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQL-RHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBE-EEEEESCSTTHHHHHHHHHHHTT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcE-EEEecCCCCHHHHHHHHHHHHhc
Confidence 2 22 26799999999999444443 23688988999999999998764
No 220
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.34 E-value=8.3e-12 Score=91.50 Aligned_cols=101 Identities=16% Similarity=0.314 Sum_probs=79.1
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------------------
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA------------------- 204 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~------------------- 204 (272)
+..++++.+.-.. ..+++++|+||++||++|+.+.+.+.+++..+. ++.++.++++.
T Consensus 10 ~~~~~g~~~~l~~-~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 10 AKTLDGHDFHGES-LLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp EEBTTSCEEEGGG-GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred cccCCCCEeeHHH-hCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 4445555544332 247899999999999999999999999999987 58899998854
Q ss_pred ----C-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 205 ----N-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 205 ----~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+ .+ ..+++.++|+++++..++.+ . ++.|..+.+.|.++|++.++
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i-~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNV-D-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCE-E-EEESCCCHHHHHHHHHHHC-
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCE-E-EEecCCCHHHHHHHHHHHhc
Confidence 2 22 26799999999999655554 3 78999999999999998764
No 221
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.34 E-value=3.5e-12 Score=85.89 Aligned_cols=81 Identities=12% Similarity=0.120 Sum_probs=71.3
Q ss_pred ceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCC
Q 024107 33 KLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLT 111 (272)
Q Consensus 33 ~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~ 111 (272)
..++.||++| ++|+++.|.+.++++.+.+.+.|+.+|++.. ++++++||+.++ ||+ .+ ++.. .+.|..+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~-Pt~-~~--~G~~---~~~G~~~ 72 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVD---REKAIEYGLMAV-PAI-AI--NGVV---RFVGAPS 72 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTC---GGGGGGTCSSCS-SEE-EE--TTTE---EEECSSC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCC---HHHHHhCCceee-CEE-EE--CCEE---EEccCCC
Confidence 3688999999 9999999999999999998899999999998 899999999999 999 56 3332 3478889
Q ss_pred hHHHHHHHHHHh
Q 024107 112 PSNIEEFCSRLL 123 (272)
Q Consensus 112 ~~~i~~fi~~~~ 123 (272)
.+.+.+++.+.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 222
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.34 E-value=5.7e-12 Score=92.52 Aligned_cols=100 Identities=21% Similarity=0.375 Sum_probs=78.0
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------------------
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA------------------- 204 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~------------------- 204 (272)
+..++++.+.-.. ..+++++|.||++||++|+.+.+.+.+++.++. ++.++.++++.
T Consensus 9 l~~~~g~~~~l~~-~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (136)
T 1lu4_A 9 ATTLSGAPFDGAS-LQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNL 84 (136)
T ss_dssp EEBTTSCEEEGGG-GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEE
T ss_pred eecCCCCeecHHH-hCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEE
Confidence 4444444443322 247899999999999999999999999999997 58999999876
Q ss_pred ---C-CC-CCCcccCCCeEEEEeCCCCcCceEee---CCCCHHHHHHHHHHHc
Q 024107 205 ---N-EH-PKLQVEEYPTLLFYPAGDKANPIKVS---ARSSSKNIAAFIKEQL 249 (272)
Q Consensus 205 ---~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~---g~~~~~~l~~~i~~~~ 249 (272)
+ .+ ..+++.++|+++++..++.+ . ++. |..+.+.|.++|++.+
T Consensus 85 ~d~~~~~~~~~~i~~~P~~~lid~~G~i-~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 85 NDADGVIWARYNVPWQPAFVFYRADGTS-T-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp ECTTSHHHHHTTCCSSSEEEEECTTSCE-E-EECCSSSCCCHHHHHHHHHHC-
T ss_pred ECCchhHHHhcCCCCCCEEEEECCCCcE-E-EEEcCCCccCHHHHHHHHHHHh
Confidence 3 33 36799999999999655554 3 688 9899999999998764
No 223
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.32 E-value=4.5e-13 Score=97.97 Aligned_cols=104 Identities=11% Similarity=0.088 Sum_probs=86.7
Q ss_pred CceEee-Cccccccccc----CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 14 PLVTKL-TDINSASVHS----SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 14 ~~v~~l-~~~~f~~~~~----~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
+.+.++ +.++|.+.+. ++++++|+||++| ++|+++.|.|.++++.+. .+.|+.||++.. ++++++|||.+
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~---~~~~~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDEL---KEVAEKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTS---GGGHHHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccch---HHHHHHcCCCc
Confidence 445666 5688888775 3789999999999 999999999999999997 499999999998 89999999999
Q ss_pred CCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 88 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+ ||+ .++.++. ....+.| .+.+.+.+++.+.+..
T Consensus 90 ~-Pt~-~~~~~g~-~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 90 M-PTF-LFIKDGA-EADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp S-CCC-CBCTTTT-CCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred c-ceE-EEEeCCe-EEEEEeC-CCHHHHHHHHHHHHhc
Confidence 9 999 7775543 3334466 6889999999998764
No 224
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.30 E-value=2.2e-11 Score=92.55 Aligned_cols=108 Identities=16% Similarity=0.291 Sum_probs=82.1
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C-CCCC----------
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-HPKL---------- 210 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~-~~~~---------- 210 (272)
.+..++++.+.-.- -.+++++|+||++||++|+.+.+.+.+++.++.+. ++.++.|+++.. + +.++
T Consensus 18 ~l~~~~g~~~~l~~-~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~ 95 (165)
T 3or5_A 18 SGVTVDGKPFSSAS-LKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR-GFTFVGIAVNEQLPNVKNYMKTQGIIYPV 95 (165)
T ss_dssp EEECTTSCEEEGGG-GTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-TEEEEEEECSCCHHHHHHHHHHHTCCSCE
T ss_pred eeeCCCCCEechhH-cCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCCce
Confidence 34455555444322 24789999999999999999999999999999874 499999999875 2 2233
Q ss_pred -----------------cccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 211 -----------------QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 211 -----------------~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
++.++|+++++..++.+ ..++.|..+.+.|.++|++.++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 96 MMATPELIRAFNGYIDGGITGIPTSFVIDASGNV-SGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp EECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBE-EEEECSCCCHHHHHHHHHHHHC---
T ss_pred EecCHHHHHHHhhhhccCCCCCCeEEEECCCCcE-EEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 78999999999554444 2368899999999999999987543
No 225
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.29 E-value=1e-12 Score=92.73 Aligned_cols=73 Identities=14% Similarity=0.229 Sum_probs=58.3
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC------CC-CC-CCCcccCCCeEEEEeCCCCcCceE
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS------AN-EH-PKLQVEEYPTLLFYPAGDKANPIK 231 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~------~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~ 231 (272)
++.++|.|||+||++|+.+.|.|.+++..+. .+|++ .+ ++ .+++|.++||+++ +|+ +
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~-----~ 76 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR-----T 76 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE-----E
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE-----E
Confidence 4567999999999999999999999986653 45555 33 34 3789999999777 442 5
Q ss_pred eeCCCCHHHHHHHHHH
Q 024107 232 VSARSSSKNIAAFIKE 247 (272)
Q Consensus 232 ~~g~~~~~~l~~~i~~ 247 (272)
|.|..+.+.|.+|+.-
T Consensus 77 ~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 77 YTGVRSLEALAVASGY 92 (106)
T ss_dssp EESCCCHHHHHHHHTC
T ss_pred ecCCCCHHHHHHHhCC
Confidence 8999999999999853
No 226
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.28 E-value=2.1e-12 Score=103.02 Aligned_cols=102 Identities=14% Similarity=0.182 Sum_probs=83.3
Q ss_pred CCceEee-CcccccccccCC---cceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 13 FPLVTKL-TDINSASVHSSP---IKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 13 ~~~v~~l-~~~~f~~~~~~~---~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
...|.++ +.++|.+.+... ++++|+||++| ++|+.+.|.|.++|..+. .+.|+.||++ . +.++.+|+|.+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~---~~l~~~~~i~~ 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-N---TGAGDRFSSDV 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-H---HTCSTTSCGGG
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-c---HHHHHHCCCCC
Confidence 3457777 889999877433 79999999999 999999999999999996 5999999998 5 78999999999
Q ss_pred CCceEEEEEeCCcceeecCCCCCC-------hHHHHHHHHHH
Q 024107 88 SKNTVVTAFDNKAISKFLLESDLT-------PSNIEEFCSRL 122 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~~-------~~~i~~fi~~~ 122 (272)
+ ||+ .+|.++.. ...+.|..+ .+.|..|+.+.
T Consensus 173 ~-PTl-~~~~~G~~-v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 L-PTL-LVYKGGEL-ISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp C-SEE-EEEETTEE-EEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred C-CEE-EEEECCEE-EEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9 999 77776543 223345443 58899998874
No 227
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.27 E-value=3.1e-11 Score=90.52 Aligned_cols=93 Identities=12% Similarity=0.174 Sum_probs=74.8
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------------CC-CCCc-
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------------EH-PKLQ- 211 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------------------~~-~~~~- 211 (272)
.+++++|+||++||++|+.+.|.+.+++.++++. ++.++.|+++.. .+ ..++
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG-SVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-TEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 4789999999999999999999999999999654 699999998631 12 2466
Q ss_pred -ccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 212 -VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 212 -v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
+.++|+++++..++.+ ..++.|..+.+.|.++|++......
T Consensus 102 ~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGY-RQTITGEVNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp CSCCSSEEEEEETTTTE-EEECCSCCCHHHHHHHHHHHHTC--
T ss_pred ccCCCCEEEEECCCCcE-EEEECCCCCHHHHHHHHHHHHHHhh
Confidence 8999999999655544 3378999999999999998876543
No 228
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.26 E-value=3.1e-11 Score=90.42 Aligned_cols=94 Identities=18% Similarity=0.336 Sum_probs=75.1
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------CC-CCCcccC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------EH-PKLQVEE 214 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----------------------~~-~~~~v~~ 214 (272)
.+++++|+||++||++|+.+.+.+.+++..+.+. ++.++.|+++.. .+ ..+++.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ-GVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC
Confidence 4789999999999999999999999999999763 488888888652 23 2679999
Q ss_pred CCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCC
Q 024107 215 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 215 ~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
+|+++++..++.+ ..++.|..+.+.|.++|++.+.....
T Consensus 104 ~P~~~lid~~G~i-~~~~~G~~~~~~l~~~l~~ll~~~~~ 142 (151)
T 2f9s_A 104 LPTTFLINPEGKV-VKVVTGTMTESMIHDYMNLIKPGETS 142 (151)
T ss_dssp SCEEEEECTTSEE-EEEEESCCCHHHHHHHHHHHSCC---
T ss_pred CCeEEEECCCCcE-EEEEeCCCCHHHHHHHHHHHHhhhhc
Confidence 9999999544433 23688999999999999998876543
No 229
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.25 E-value=9.1e-12 Score=95.12 Aligned_cols=94 Identities=12% Similarity=0.103 Sum_probs=67.9
Q ss_pred cccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCc---ccCCCeEEEEe
Q 024107 148 VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQ---VEEYPTLLFYP 222 (272)
Q Consensus 148 ~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~---v~~~P~l~~~~ 222 (272)
+...+..+....+++++|.||++||++|+.+.|.+.+++..+. ++.+..+|.+.+ +. .+|. +.++||+++|+
T Consensus 42 ~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 42 PSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 4444444322346789999999999999999999999998875 699999998877 44 4665 99999999998
Q ss_pred CCCCcCceEeeCCCCHHHHHHHHHH
Q 024107 223 AGDKANPIKVSARSSSKNIAAFIKE 247 (272)
Q Consensus 223 ~~~~~~~~~~~g~~~~~~l~~~i~~ 247 (272)
+|+.. ..++ |... ..+.+.+.+
T Consensus 119 ~~G~~-~~~~-g~~p-~~~~~~i~~ 140 (167)
T 1z6n_A 119 EEFNL-LGRF-VERP-QAVLDGGPQ 140 (167)
T ss_dssp TTCCE-EEEE-ESSC-HHHHHHCHH
T ss_pred CCCCE-EEEE-cCCC-HHHHHhHHH
Confidence 87544 1244 4433 344444444
No 230
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.25 E-value=7.8e-12 Score=87.74 Aligned_cols=93 Identities=9% Similarity=-0.040 Sum_probs=78.3
Q ss_pred CcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchh----HHhhcCCCC-CCceEE
Q 024107 20 TDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKP----FLTLFGLEE-SKNTVV 93 (272)
Q Consensus 20 ~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~----l~~~~~i~~-~~P~i~ 93 (272)
+.++|+++++++++++|.|+++| ++|+.+.|.+++++.. +.+.|++||.++. ++ ++.++||.+ . ||+
T Consensus 13 s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~---r~~Sn~IA~~~~V~h~s-Pq~- 85 (112)
T 3iv4_A 13 SIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQE---RDLSDYIAKKTNVKHES-PQA- 85 (112)
T ss_dssp SHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGG---HHHHHHHHHHHTCCCCS-SEE-
T ss_pred CHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecC---chhhHHHHHHhCCccCC-CeE-
Confidence 66778888888899999999999 9999999999999985 4599999999988 66 799999995 7 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHH
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFC 119 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi 119 (272)
++|.+|+..-....+.++.+.|.+.+
T Consensus 86 il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 86 FYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEECCEEEEEeeccccCHHHHHHhh
Confidence 88888764333346788888887654
No 231
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.24 E-value=7.3e-12 Score=82.76 Aligned_cols=73 Identities=18% Similarity=0.358 Sum_probs=60.1
Q ss_pred EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEEeCCCCcCceEeeCCC-CHHH
Q 024107 163 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFYPAGDKANPIKVSARS-SSKN 240 (272)
Q Consensus 163 ~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~-~~~~ 240 (272)
+.|.||++||++|+.+.|.+.+++..+.. ++.++.+| ..++ .++++.++|++++ +|+.. ..|.. +.+.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~--~~~~~~~~~v~~~Pt~~~--~G~~~----~~G~~~~~~~ 71 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK--EMDQILEAGLTALPGLAV--DGELK----IMGRVASKEE 71 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC--SHHHHHHHTCSSSSCEEE--TTEEE----ECSSCCCHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec--CHHHHHHCCCCcCCEEEE--CCEEE----EcCCCCCHHH
Confidence 46899999999999999999999999986 79999999 2244 4789999999998 55432 33886 8999
Q ss_pred HHHHH
Q 024107 241 IAAFI 245 (272)
Q Consensus 241 l~~~i 245 (272)
|.+||
T Consensus 72 l~~~l 76 (77)
T 1ilo_A 72 IKKIL 76 (77)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98876
No 232
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.23 E-value=7.1e-11 Score=89.25 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=75.0
Q ss_pred CCCcEEEEEECCCChhHHH-hHHHHHHHHHHhcCCCceEEEEEeCC----------------------------CC-C--
Q 024107 159 SHKDVLLEVYTPWCVTCET-TSKQIEKLAKHFKGLDNLVIAKIDAS----------------------------AN-E-- 206 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~-~~~~~~~~a~~~~~~~~v~~~~id~~----------------------------~~-~-- 206 (272)
.+++++|.||++||++|+. +.+.+.++.+++++. ++.+..|+++ .. .
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccc
Confidence 4789999999999999999 699999999999874 5999998862 12 2
Q ss_pred ----C-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 207 ----H-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 207 ----~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
+ ..|++.++|+++++..++.+ ..++.|..+.+.|.++|++.+...
T Consensus 108 ~~~~~~~~~~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~~~ 157 (160)
T 3lor_A 108 RIPSTMKKYRLEGTPSIILADRKGRI-RQVQFGQVDDFVLGLLLGSLLSET 157 (160)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSBE-EEEEESCCCHHHHHHHHHHHHTCC
T ss_pred hhhhHHHhcccCccceEEEECCCCcE-EEEecCcCCHHHHHHHHHHHHhcc
Confidence 3 26789999999999655444 337889999999999999988643
No 233
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.23 E-value=4e-11 Score=88.86 Aligned_cols=85 Identities=11% Similarity=0.288 Sum_probs=70.7
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------------------------C-CC-CCCc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------------N-EH-PKLQ 211 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------------------------~-~~-~~~~ 211 (272)
.+++++|+||++||++|+.+.+.+.++++++... ++.++.|+++. + .+ ..++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD-SVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS-SEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC-CEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 5789999999999999999999999999999843 69999999864 2 33 3779
Q ss_pred ccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHH
Q 024107 212 VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFI 245 (272)
Q Consensus 212 v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i 245 (272)
+.++|+++++..++.+ ..++.|..+.+.|.++|
T Consensus 112 v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 IITIPTSFLLNEKGEI-EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CCEESEEEEECTTCCE-EEEEESCCCHHHHHHHH
T ss_pred cCccCeEEEEcCCCcE-EEEEcCCcCHHHHHHhh
Confidence 9999999999544443 23789999999999887
No 234
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.22 E-value=3.3e-12 Score=100.32 Aligned_cols=115 Identities=16% Similarity=0.247 Sum_probs=81.5
Q ss_pred hhHHhhcCCCCCCceEEEEEeCCcceeecCC-CCCChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHH
Q 024107 77 KPFLTLFGLEESKNTVVTAFDNKAISKFLLE-SDLTPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDL 155 (272)
Q Consensus 77 ~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 155 (272)
....+.+||++. |++ .+ ++ +|... +..+.+++.+|+.+++. +.+++.++++|..... ...+.+|..+
T Consensus 40 ~~~a~~~gi~gv-P~f-vi--ng---k~~~~~~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~---~~~g~~y~~l 107 (197)
T 1un2_A 40 EKAAADVQLRGV-PAM-FV--NG---KYQLNPQGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ---YEDGKQYTTL 107 (197)
T ss_dssp HHHHHHTTCCSS-SEE-EE--TT---TEEECGGGSCCSSHHHHHHHHHH--HHHHHTC------------CCBTTTEEEC
T ss_pred HHHHHHcCCCcC-CEE-EE--cc---eEecCccccccccHHHHHHHHHH--HHHHHHhCcccccccc---cCCCCCceEc
Confidence 467899999999 999 55 22 23222 34666788999998887 7788888888875332 2345566654
Q ss_pred hh-cCCCcEEEEEECCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCCC
Q 024107 156 VL-NSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASAN 205 (272)
Q Consensus 156 v~-~~~~~~lv~f~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~~ 205 (272)
.. .+.++++|.||+.||++|+.+.|.+ .++++.+.+ ++.|..++++.+
T Consensus 108 ~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~ 159 (197)
T 1un2_A 108 EKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFM 159 (197)
T ss_dssp SSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSS
T ss_pred cCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcC
Confidence 32 2367899999999999999999999 999999976 799999998764
No 235
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.21 E-value=8.2e-11 Score=88.23 Aligned_cols=94 Identities=16% Similarity=0.253 Sum_probs=75.0
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------C-CC-CCCccc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------N-EH-PKLQVE 213 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-----------------------~-~~-~~~~v~ 213 (272)
.+++++|.||++||++|+.+.+.+.+++..+.+. ++.+..++.+. + .+ ..+++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 105 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK-NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQ 105 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCC
Confidence 5789999999999999999999999999999864 48888777431 2 22 256899
Q ss_pred CCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCC
Q 024107 214 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 214 ~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
++|+++++..++.+ ..++.|..+.+.|.++|++.+.....
T Consensus 106 ~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~ll~~~~~ 145 (153)
T 2l5o_A 106 VYPTSVLIGKKGEI-LKTYVGEPDFGKLYQEIDTAWRNSDA 145 (153)
T ss_dssp SSSEEEEECSSSCC-CEEEESSCCHHHHHHHHHHHHHCCSS
T ss_pred ccCeEEEECCCCcE-EEEEcCCCCHHHHHHHHHHHHHhhhh
Confidence 99999999544443 23789999999999999998876544
No 236
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.21 E-value=7e-11 Score=88.74 Aligned_cols=88 Identities=13% Similarity=0.248 Sum_probs=71.9
Q ss_pred CcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC---------------------------CC-CC-CCCc
Q 024107 161 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS---------------------------AN-EH-PKLQ 211 (272)
Q Consensus 161 ~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~---------------------------~~-~~-~~~~ 211 (272)
++++|+||++||++|+.+.+.+.++++++ ++.++.|+++ .. .+ ..++
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC
Confidence 89999999999999999999999999999 3778888872 22 33 4789
Q ss_pred ccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCC
Q 024107 212 VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 212 v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 253 (272)
+.++|+++++..++.+ ..++.|..+.+.|.++|++..+...
T Consensus 107 v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 107 VLGQPWTFVVDREGKV-VALFAGRAGREALLDALLLAGADLE 147 (154)
T ss_dssp BCSSCEEEEECTTSEE-EEEEESBCCHHHHHHHHHHTTCCC-
T ss_pred CCcccEEEEECCCCCE-EEEEcCCCCHHHHHHHHHhccCccc
Confidence 9999999999544444 3378999999999999999887554
No 237
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.84 E-value=1.3e-12 Score=95.68 Aligned_cols=102 Identities=9% Similarity=0.016 Sum_probs=83.1
Q ss_pred cccccccccCCcceEEEEEEcc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEE
Q 024107 21 DINSASVHSSPIKLQVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAF 96 (272)
Q Consensus 21 ~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~---~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~ 96 (272)
++.+......+++++|.||++| ++|+.+.|.+ .++++.+.+.+.|+.||++...+ ..++++|||.++ ||+ .++
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~~~v~~~-Pt~-~~~ 85 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEG-QELARRYRVPGT-PTF-VFL 85 (130)
Confidence 4455556677889999999999 9999999999 99999988889999999953322 689999999999 999 788
Q ss_pred eCCcc-e--eecCCCCCChHHHHHHHHHHhcC
Q 024107 97 DNKAI-S--KFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 97 ~~~~~-~--~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+..++ . ...+.|..+.+.+.+++.+.+.+
T Consensus 86 d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 86 VPKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 53322 2 34568889999999999998764
No 238
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.20 E-value=5.9e-11 Score=90.07 Aligned_cols=104 Identities=17% Similarity=0.294 Sum_probs=79.0
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC------------------
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA------------------ 204 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~------------------ 204 (272)
.+..++++.+.... ..+++++|+||++||++|+.+.|.+.+++++++.. ++.+..|+++.
T Consensus 22 ~l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT-TSEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC-CcEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 46667777666432 35789999999999999999999999999998654 47777776531
Q ss_pred ----------C-CC-CCCcccCCCeEEEEe-CCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 205 ----------N-EH-PKLQVEEYPTLLFYP-AGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 205 ----------~-~~-~~~~v~~~P~l~~~~-~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+ ++ ..|++.++|+++++. +|+.. .++.|..+.+.|.++|++.+.
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQ--RIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEE--EEEESCCCHHHHHHHHHCTTC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEE--EEEcCCCCHHHHHHHHHHHHH
Confidence 1 11 135889999999994 55433 368899999999999998765
No 239
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.20 E-value=2.2e-11 Score=98.55 Aligned_cols=103 Identities=12% Similarity=0.216 Sum_probs=83.3
Q ss_pred CCceEee-Cccccccccc---CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCC
Q 024107 13 FPLVTKL-TDINSASVHS---SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEE 87 (272)
Q Consensus 13 ~~~v~~l-~~~~f~~~~~---~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~ 87 (272)
...|.++ +.++|.+.+. ++++++|.||++| ++|+.+.|.|.++|..+.+ +.|+.||++.. .++..|+|.+
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~~----~l~~~~~I~~ 185 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASNT----GAGDRFSSDV 185 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHHH----CCTTSSCTTT
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCcH----HHHHHCCCCC
Confidence 3467888 7889998774 3789999999999 9999999999999999987 99999999763 6999999999
Q ss_pred CCceEEEEEeCCcce-eec-C---CC-CCChHHHHHHHHHH
Q 024107 88 SKNTVVTAFDNKAIS-KFL-L---ES-DLTPSNIEEFCSRL 122 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~-~~~-~---~g-~~~~~~i~~fi~~~ 122 (272)
+ ||+ .+|.+|... .+. + .| ..+.+.|..|+.+.
T Consensus 186 ~-PTl-l~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 186 L-PTL-LVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp C-SEE-EEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred C-CEE-EEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 9 999 788766432 221 1 12 25778899999884
No 240
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.20 E-value=4.7e-11 Score=89.45 Aligned_cols=94 Identities=16% Similarity=0.355 Sum_probs=76.7
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCC------------------------C-CCCccc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE------------------------H-PKLQVE 213 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~------------------------~-~~~~v~ 213 (272)
.+++++|.||++||+.|+.+.+.+.++.+.+.+. ++.++.|+++... + ..+++.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGK-DIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN 107 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS-SEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC-CeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC
Confidence 4689999999999999999999999999999763 5999999887752 2 257899
Q ss_pred CCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcCCC
Q 024107 214 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 214 ~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~~~ 254 (272)
++|+++++..++.+ ..++.|..+.+.|.++|++.++.+..
T Consensus 108 ~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 108 GIPRFILLDRDGKI-ISANMTRPSDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp SSCCEEEECTTSCE-EESSCCCTTCHHHHHHHHHHHTCCSS
T ss_pred CCCEEEEECCCCeE-EEccCCCCCHHHHHHHHHHHhccccc
Confidence 99999999744433 22567888999999999999876654
No 241
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.20 E-value=6.6e-11 Score=89.24 Aligned_cols=93 Identities=4% Similarity=-0.011 Sum_probs=76.9
Q ss_pred cCCcceEEEEE-Ecc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcc--------cchhHHhhcCCCCCCceEEEE
Q 024107 29 SSPIKLQVYVF-AKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADED--------LAKPFLTLFGLEESKNTVVTA 95 (272)
Q Consensus 29 ~~~~~~~v~fy-~~~-~~c~~~~~~~---~~~a~~~~~~i~~~~vd~~~~~--------~~~~l~~~~~i~~~~P~i~~~ 95 (272)
..+++++|.|| ++| ++|+++.|.+ .++++.+...+.++.+|++... ....+++.|+|.++ ||+ .+
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~-Pt~-~~ 122 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF-PEL-VF 122 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS-SEE-EE
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC-CEE-EE
Confidence 45689999999 999 9999999999 7887777566999999998751 01489999999999 999 88
Q ss_pred EeCCcceeecCCCCC--ChHHHHHHHHHHhc
Q 024107 96 FDNKAISKFLLESDL--TPSNIEEFCSRLLH 124 (272)
Q Consensus 96 ~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~ 124 (272)
++.++...+.+ |.. +.+.+.+++.+.++
T Consensus 123 ~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 123 IDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp ECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred EcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 86555556666 877 89999999999875
No 242
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.19 E-value=9e-11 Score=95.31 Aligned_cols=97 Identities=10% Similarity=0.036 Sum_probs=79.1
Q ss_pred eCccccccccc-CCcceEEEEEEcc-cchHHHHHHHHHHHHHhc----CceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 19 LTDINSASVHS-SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK----GKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 19 l~~~~f~~~~~-~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~----~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
+++++++.+.. .++.+++.||++| ++|+++.|.|.++|..+. +.+.++.||++.+ ++++++|||.++ ||+
T Consensus 125 l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~V~~v-Pt~ 200 (243)
T 2hls_A 125 LEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN---PDIADKYGVMSV-PSI 200 (243)
T ss_dssp CCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC---HHHHHHTTCCSS-SEE
T ss_pred CCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC---HHHHHHcCCeee-CeE
Confidence 45555554432 3446688899999 999999999999999983 4699999999998 899999999999 999
Q ss_pred EEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 93 VTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
.+ ++. .. +.|.++.+.|.+|+.+.+..
T Consensus 201 -~i--~G~-~~--~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 201 -AI--NGY-LV--FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp -EE--TTE-EE--EESCCCHHHHHHHHHHHHTT
T ss_pred -EE--CCE-EE--EeCCCCHHHHHHHHHHHhhc
Confidence 55 332 22 58999999999999998764
No 243
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.19 E-value=1.9e-10 Score=85.42 Aligned_cols=105 Identities=11% Similarity=0.121 Sum_probs=83.9
Q ss_pred eCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCC------------------------c
Q 024107 19 LTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIAD------------------------E 73 (272)
Q Consensus 19 l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~------------------------~ 73 (272)
++...+....-++++++|.||++| ++|+...|.+.++++.+.+++.|+.|+++. .
T Consensus 17 ~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (148)
T 2b5x_A 17 LNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFV 96 (148)
T ss_dssp ESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEE
T ss_pred ccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEE
Confidence 455555443346689999999999 999999999999999999879999999653 1
Q ss_pred ccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 74 DLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 74 ~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+....+++.||+.++ |++ .+++.++...+.+.|..+.+.+.+++.+.+..
T Consensus 97 d~~~~~~~~~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 97 DSDHALTDAFENEYV-PAY-YVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp CSSCHHHHHTCCCCS-SEE-EEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred CCchhHHHHhCCCCC-CEE-EEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 111589999999999 999 88866555566668888999999999998753
No 244
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.19 E-value=2.1e-10 Score=83.98 Aligned_cols=87 Identities=6% Similarity=0.103 Sum_probs=75.1
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCC----------------------cccchhHHhhcCCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIAD----------------------EDLAKPFLTLFGLE 86 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~----------------------~~~~~~l~~~~~i~ 86 (272)
.+++++|.||++| ++|+...+.+.++++++. .+.|+.|+++. . ..+++.||+.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~i~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD---GVIWARYNVP 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT---SHHHHHTTCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc---hhHHHhcCCC
Confidence 5678999999999 999999999999999998 69999999987 4 6899999999
Q ss_pred CCCceEEEEEeCCcceeecCC---CCCChHHHHHHHHHHh
Q 024107 87 ESKNTVVTAFDNKAISKFLLE---SDLTPSNIEEFCSRLL 123 (272)
Q Consensus 87 ~~~P~i~~~~~~~~~~~~~~~---g~~~~~~i~~fi~~~~ 123 (272)
++ |++ .+++.++... .+. |..+.+.+.+++.+.+
T Consensus 99 ~~-P~~-~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 99 WQ-PAF-VFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SS-SEE-EEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CC-CEE-EEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 99 999 7886554444 557 8899999999998864
No 245
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.18 E-value=1.7e-10 Score=87.00 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=74.6
Q ss_pred CCCcEEEEEECCCChhHHHh-HHHHHHHHHHhcCCCceEEEEEeCCC----------------------------CC---
Q 024107 159 SHKDVLLEVYTPWCVTCETT-SKQIEKLAKHFKGLDNLVIAKIDASA----------------------------NE--- 206 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~-~~~~~~~a~~~~~~~~v~~~~id~~~----------------------------~~--- 206 (272)
.+++++|.||++||++|+.. .+.+.++.+++++. ++.+..|+++. ..
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED-KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC-CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 37899999999999999995 99999999999854 69999988641 11
Q ss_pred ---C-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 207 ---H-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 207 ---~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
+ ..|++.++|+++++..++.+ ..++.|..+.+.|.++|++.+...
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDL-RAHHFGDVSELLLGAEIATLLGEA 154 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEE-EEEEESCCCHHHHHHHHHHHHTSC
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCE-EEEEeCCCCHHHHHHHHHHHhccC
Confidence 2 25789999999999655544 337889999999999999988643
No 246
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.17 E-value=4.7e-11 Score=91.64 Aligned_cols=102 Identities=8% Similarity=-0.007 Sum_probs=79.9
Q ss_pred eeCcccccccc----cCCcceEEEEEEcc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccchhH----------
Q 024107 18 KLTDINSASVH----SSPIKLQVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLAKPF---------- 79 (272)
Q Consensus 18 ~l~~~~f~~~~----~~~~~~~v~fy~~~-~~c~~~~~~~---~~~a~~~~~~i~~~~vd~~~~~~~~~l---------- 79 (272)
..+..+|.+.+ .++++++|.||++| ++|+.+.+.+ .++.+.+.+.+.|+.||++.. .++
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~---~~~~~~~~~~~~~ 106 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNK---TPLTEPVKIMENG 106 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCC---CEEEEEEEEEETT
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcc---cccchhhhhhhcc
Confidence 34555666655 56789999999999 9999975544 666666665799999999877 444
Q ss_pred ----------------HhhcCCCCCCceEEEEEeCCcceeecCCCCCC-hHHHHHHHHHHhc
Q 024107 80 ----------------LTLFGLEESKNTVVTAFDNKAISKFLLESDLT-PSNIEEFCSRLLH 124 (272)
Q Consensus 80 ----------------~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~-~~~i~~fi~~~~~ 124 (272)
++.||+.++ ||+ .+++.++.....+.|..+ .+.+.+++.+.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~v~~~-Pt~-~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 107 TERTLRTVGDKWSYLQRVKFGANAQ-PFY-VLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEEEHHHHHHHHHHHHHSCCCS-SEE-EEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhHHHHHHcCCCCc-ceE-EEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 799999999 999 888665545555678888 9999999998764
No 247
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.17 E-value=3.5e-10 Score=87.73 Aligned_cols=139 Identities=14% Similarity=0.247 Sum_probs=93.6
Q ss_pred ChHHHHHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhc
Q 024107 111 TPSNIEEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFK 190 (272)
Q Consensus 111 ~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~ 190 (272)
+..++.+|+..+..|.+...........-....+...+++.+.-. .-.+++++|+||++||++|+...+.+.++.++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~f~l~~~~G~~~~l~-~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~ 90 (186)
T 1jfu_A 12 AAVATAQKIAPLAHGEVAALTMASAPLKLPDLAFEDADGKPKKLS-DFRGKTLLVNLWATWCVPCRKEMPALDELQGKLS 90 (186)
T ss_dssp HHHHHHHHHGGGCCGGGTTCEECCSCCBCCCCEEECTTSCEEEGG-GGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhhcchhhcchhhhhccccCCCcCCCcEeEcCCCCEeeHH-HcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc
Confidence 456788888888877765554332222212233444444433221 1147899999999999999999999999999998
Q ss_pred CCCceEEEEEeCCCCC---C----CCCccc-----------------------CCCeEEEEeCCCCcCceEeeCCCC--H
Q 024107 191 GLDNLVIAKIDASANE---H----PKLQVE-----------------------EYPTLLFYPAGDKANPIKVSARSS--S 238 (272)
Q Consensus 191 ~~~~v~~~~id~~~~~---~----~~~~v~-----------------------~~P~l~~~~~~~~~~~~~~~g~~~--~ 238 (272)
.. ++.++.|+++... . .++++. ++|+++++..++++ ..++.|..+ .
T Consensus 91 ~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i-~~~~~g~~~~~~ 168 (186)
T 1jfu_A 91 GP-NFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCE-IATIAGPAEWAS 168 (186)
T ss_dssp BT-TEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBE-EEEEESCCCTTS
T ss_pred cC-CcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCE-EEEEecCCccCH
Confidence 43 6899999887641 1 133442 89999999555444 236778754 7
Q ss_pred HHHHHHHHHHcCcC
Q 024107 239 KNIAAFIKEQLKEK 252 (272)
Q Consensus 239 ~~l~~~i~~~~~~~ 252 (272)
+.|.++|++.+..+
T Consensus 169 ~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 169 EDALKLIRAATGKA 182 (186)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhccc
Confidence 89999999987643
No 248
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.16 E-value=2.6e-11 Score=85.48 Aligned_cols=74 Identities=9% Similarity=-0.127 Sum_probs=60.9
Q ss_pred CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC------CcccchhHHhhcCCCCCCceEEEEEeCCccee
Q 024107 31 PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA------DEDLAKPFLTLFGLEESKNTVVTAFDNKAISK 103 (272)
Q Consensus 31 ~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~------~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~ 103 (272)
++..+|.||++| ++|+++.|.|.++++.+. .|||+ .. +++|++|||.++ ||+ .+ ++ ..
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~---~~l~~~~~V~~~-PT~-~i--~G--~~ 76 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQ---AQECTEAGITSY-PTW-II--NG--RT 76 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCC---CHHHHHTTCCSS-SEE-EE--TT--EE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchh---HHHHHHcCCeEe-CEE-EE--CC--EE
Confidence 456799999999 999999999999997775 56666 34 789999999999 999 55 33 34
Q ss_pred ecCCCCCChHHHHHHHHH
Q 024107 104 FLLESDLTPSNIEEFCSR 121 (272)
Q Consensus 104 ~~~~g~~~~~~i~~fi~~ 121 (272)
+.|.++.+.|.+|+.-
T Consensus 77 --~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 77 --YTGVRSLEALAVASGY 92 (106)
T ss_dssp --EESCCCHHHHHHHHTC
T ss_pred --ecCCCCHHHHHHHhCC
Confidence 4899999999998743
No 249
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.14 E-value=4.4e-10 Score=82.11 Aligned_cols=101 Identities=10% Similarity=0.117 Sum_probs=79.3
Q ss_pred CcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------ccchh
Q 024107 20 TDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------DLAKP 78 (272)
Q Consensus 20 ~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~--------------------~~~~~ 78 (272)
+...+......+++++|.||++| ++|+...+.+.++++.+. .+.|+.|+++.. +....
T Consensus 14 ~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 92 (136)
T 1zzo_A 14 DGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGS 92 (136)
T ss_dssp TSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCH
T ss_pred CCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcH
Confidence 33344333335678999999999 999999999999999998 699999998541 01158
Q ss_pred HHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 79 FLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 79 l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+++.||+.++ |++ .+++.++... .+.|..+.+.+.+++.+.++
T Consensus 93 ~~~~~~i~~~-P~~-~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 93 VWANFGVTQQ-PAY-AFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp HHHHTTCCSS-SEE-EEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred HHHHcCCCCC-ceE-EEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 9999999999 999 7887554444 56888999999999998753
No 250
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.13 E-value=4.8e-11 Score=83.65 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=64.3
Q ss_pred cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHH
Q 024107 162 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSK 239 (272)
Q Consensus 162 ~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~ 239 (272)
..+++|+++||++|+.+.+.+.+++.++. +.+..+|++.+ ++ .++++. +|++++|.+|+.+ ..|..+.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~----i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v----~~g~~~~~ 100 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW----FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL----CHYFLDSD 100 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC----CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE----ECSSCCCH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC----CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE----EecCCCHH
Confidence 56999999999999999999999998873 78889999988 55 478886 9999999888642 46888889
Q ss_pred HHHHHH
Q 024107 240 NIAAFI 245 (272)
Q Consensus 240 ~l~~~i 245 (272)
.|.+||
T Consensus 101 ~L~~~L 106 (107)
T 2fgx_A 101 VIGAYL 106 (107)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999887
No 251
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.13 E-value=2.9e-10 Score=84.08 Aligned_cols=87 Identities=16% Similarity=0.305 Sum_probs=68.8
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHH---HHHHhcCCCceEEEEEeCCCC-C-------------------------CCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEK---LAKHFKGLDNLVIAKIDASAN-E-------------------------HPK 209 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~---~a~~~~~~~~v~~~~id~~~~-~-------------------------~~~ 209 (272)
.+++++|+||++||++|+...|.+.+ +...+++. ++.+..|+.+.. + ...
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG-TLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT-SEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC-CeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 47899999999999999999999988 88888753 599999988764 2 226
Q ss_pred CcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 210 LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 210 ~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
|++.++|+++++..++.+ .+ +..+.+.|.++|++..+
T Consensus 105 ~~v~~~P~~~lid~~G~i---~~-~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKRV---IL-KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp SCCCSSSEEEEECTTCBE---EE-CSCCHHHHHHHHHC---
T ss_pred cCCCCCCeEEEECCCCCE---Ee-cCCCHHHHHHHHHHHcc
Confidence 799999999999655443 33 66889999999987653
No 252
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.13 E-value=4.8e-11 Score=88.81 Aligned_cols=90 Identities=11% Similarity=0.144 Sum_probs=72.6
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C-------------------------CC-CCc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-------------------------HP-KLQ 211 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~-------------------------~~-~~~ 211 (272)
.+++++|+||++||++|+.+.+.+.++.+.+... ++.++.|+++.. + +. .++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 4789999999999999999999999999999873 499999999865 3 32 568
Q ss_pred ccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 212 VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 212 v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+.++|+++++..++.+ ..++.|..+.+.+++.+.+.+.
T Consensus 109 i~~~P~~~lid~~G~i-~~~~~g~~~~~~~l~~l~~~l~ 146 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVI-IAKRIGYENLDDFLVQYEKSLK 146 (148)
T ss_dssp CCSSCEEEEECTTCBE-EEESCCGGGHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcE-EEecCCHHHHHHHHHHHHHHhc
Confidence 8999999999544444 2367788778888888776653
No 253
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.13 E-value=2.6e-10 Score=83.40 Aligned_cols=87 Identities=21% Similarity=0.353 Sum_probs=69.6
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC----------------------------C-CC-C
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----------------------------N-EH-P 208 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~----------------------------~-~~-~ 208 (272)
.+++++|+||++||++|+.+.+.+.++++.+.. ++.+..+++.. + .+ .
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLE 98 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHH
Confidence 478999999999999999999999999999665 78999985432 1 12 2
Q ss_pred CCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 209 KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 209 ~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
.+++.++|+++++..++.+ ..++.|..+.+.|.++|++.
T Consensus 99 ~~~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 99 TYGVRSYPTQAFIDKEGKL-VKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCSSSEEEEECTTCCE-EEEEESCCCHHHHHHHHHHC
T ss_pred HcCcccCCeEEEECCCCcE-EEeecCCCcHHHHHHHHHhh
Confidence 5689999999999544443 33788999999999999763
No 254
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.12 E-value=2e-10 Score=85.44 Aligned_cols=87 Identities=20% Similarity=0.392 Sum_probs=69.5
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHh-cCCCceEEEEEeCCCC--------------------------CC-CCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHF-KGLDNLVIAKIDASAN--------------------------EH-PKL 210 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~-~~~~~v~~~~id~~~~--------------------------~~-~~~ 210 (272)
.+++++|.||++||++|+.+.+.+.++++++ .+. ++.++.|+++.. .+ ..+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK-NFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT-TEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC-CeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 4789999999999999999999999999999 553 599999988763 22 377
Q ss_pred cccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 211 QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 211 ~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++.++|+++++..++.+ .+... +.+.|.++|++.+.
T Consensus 111 ~v~~~P~~~lid~~G~i---~~~~~-~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 111 AILTLPTNILLSPTGKI---LARDI-QGEALTGKLKELLK 146 (148)
T ss_dssp TCCSSSEEEEECTTSBE---EEESC-CHHHHHHHHHHHC-
T ss_pred CCCCcCEEEEECCCCeE---EEecC-CHHHHHHHHHHHHc
Confidence 99999999999554433 23333 88999999998765
No 255
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.12 E-value=9.9e-10 Score=83.23 Aligned_cols=91 Identities=11% Similarity=0.198 Sum_probs=78.8
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchhHHhhc------------------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKPFLTLF------------------------ 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~~~~l~~~~------------------------ 83 (272)
.+++++|.||++| ++|....|.+.++++++.+. +.|+.|+++.. ...++.|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ---LPNVKNYMKTQGIIYPVMMATPELIRAFNGY 109 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC---HHHHHHHHHHHTCCSCEEECCHHHHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHHHHHHcCCCCceEecCHHHHHHHhhh
Confidence 5689999999999 99999999999999999975 99999999986 6677766
Q ss_pred ---CCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 84 ---GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 84 ---~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
++.++ |++ .+++.++...+.+.|..+.+.+.+++.+.+..
T Consensus 110 ~~~~i~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 110 IDGGITGI-PTS-FVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp STTCSCSS-SEE-EEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred hccCCCCC-CeE-EEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 89999 999 78876655566678999999999999999864
No 256
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.11 E-value=5.2e-10 Score=82.83 Aligned_cols=83 Identities=13% Similarity=0.285 Sum_probs=66.6
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHH---HHHHhcCCCceEEEEEeCCCC-C-------------------------CCCC
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEK---LAKHFKGLDNLVIAKIDASAN-E-------------------------HPKL 210 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~---~a~~~~~~~~v~~~~id~~~~-~-------------------------~~~~ 210 (272)
+++++|+||++||++|+...|.+.+ +.+.+++. ++.+..|+.+.. + ...|
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~-~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK-KLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT-SEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC-CeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 6899999999999999999999999 99999764 699999988765 1 2367
Q ss_pred cccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHH
Q 024107 211 QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE 247 (272)
Q Consensus 211 ~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 247 (272)
++.++|+++++..++.+ .+.+ .+.+.|.+||++
T Consensus 110 ~v~~~P~~~lid~~G~i---~~~~-~~~~~l~~~l~e 142 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTV---LLKD-ATLQKVEQYLAE 142 (142)
T ss_dssp CCTTCSEEEEECTTCBE---EEEE-ECHHHHHHHHHC
T ss_pred CCCcCCeEEEECCCCcE---EecC-CCHHHHHHHHhC
Confidence 89999999999766544 3333 357888888763
No 257
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.10 E-value=1.6e-10 Score=88.16 Aligned_cols=102 Identities=18% Similarity=0.323 Sum_probs=72.3
Q ss_pred CeEEe--cccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC----------------
Q 024107 143 NVQIV--VGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------------- 204 (272)
Q Consensus 143 ~v~~l--~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~---------------- 204 (272)
.+..+ ++..+.......+++++|+||++||++|+.+.|.+.+++++ ++.++.|+++.
T Consensus 32 ~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~ 106 (168)
T 2b1k_A 32 RLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPY 106 (168)
T ss_dssp EEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCC
T ss_pred EeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCC
Confidence 34555 45544433234688999999999999999999999998875 36666666432
Q ss_pred -------C-CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 205 -------N-EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 205 -------~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+ .+ ..+++.++|+.+++..++.+ ..++.|..+.+.+.++|++.+.
T Consensus 107 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 107 ALSLFDGDGMLGLDLGVYGAPETFLIDGNGII-RYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp SEEEEETTCHHHHHHTCCSSSEEEEECTTSBE-EEEEESCCCHHHHHHTTHHHHH
T ss_pred ceeeECcchHHHHHcCccccCEEEEECCCCeE-EEEEeCCCCHHHHHHHHHHHHH
Confidence 2 22 25689999977766544433 2368899999999999988764
No 258
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.10 E-value=5.8e-10 Score=83.40 Aligned_cols=94 Identities=14% Similarity=0.308 Sum_probs=72.8
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCC-----------------------C-CCCcccC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE-----------------------H-PKLQVEE 214 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~-----------------------~-~~~~v~~ 214 (272)
.+++++|+||++||+.|+.+.+.+.+++.++... .+.++.|+++... + ..+++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK-GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC-CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 4789999999999999999999999999999873 3899999888641 2 2478999
Q ss_pred CCeEEEEeCCCCcCceEeeCC--CCHHHHHHHHHHHcCcCCC
Q 024107 215 YPTLLFYPAGDKANPIKVSAR--SSSKNIAAFIKEQLKEKDQ 254 (272)
Q Consensus 215 ~P~l~~~~~~~~~~~~~~~g~--~~~~~l~~~i~~~~~~~~~ 254 (272)
+|+++++..++.+ ..++.|. .+.+.|.++|++.++....
T Consensus 106 ~P~~~lid~~G~i-~~~~~g~~~~~~~~l~~~i~~~~~~~~~ 146 (152)
T 3gl3_A 106 MPTSFLIDRNGKV-LLQHVGFRPADKEALEQQILAALGGNEG 146 (152)
T ss_dssp SSEEEEECTTSBE-EEEEESCCTTTHHHHHHHHHHHTC----
T ss_pred CCeEEEECCCCCE-EEEEccCCCcCHHHHHHHHHHHHccccc
Confidence 9999999544444 2367775 4568999999998875543
No 259
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.09 E-value=1.1e-09 Score=81.90 Aligned_cols=95 Identities=7% Similarity=0.082 Sum_probs=79.0
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc---------------------cchhHHhhcC--
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED---------------------LAKPFLTLFG-- 84 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~---------------------~~~~l~~~~~-- 84 (272)
++++++|.||++| ++|....|.+.++++++.+ .+.|+.|+++... ....+++.||
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 5679999999999 9999999999999999964 4999999986210 0146888999
Q ss_pred CCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 024107 85 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 126 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 126 (272)
+.++ |++ .+++.++...+.+.|..+.+.+.+++++...+.
T Consensus 103 v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 103 VGVL-PFT-VVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp SCCS-SEE-EEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred cCCC-CEE-EEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 8899 999 788776666777899999999999999987653
No 260
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.09 E-value=5.5e-10 Score=84.31 Aligned_cols=91 Identities=15% Similarity=0.356 Sum_probs=72.1
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------------------C-CC-CCCcccCCCe
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------N-EH-PKLQVEEYPT 217 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------------------~-~~-~~~~v~~~P~ 217 (272)
.+++++|+||++||+.|+.+.+.+.++++++... ++.++.++++. + ++ ..|++.++|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG-DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT-SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC-CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 4789999999999999999999999999999854 69999999987 2 33 3679999999
Q ss_pred EEEEeCCCCcCceEeeCC--CCHHHHHHHHHHHcCc
Q 024107 218 LLFYPAGDKANPIKVSAR--SSSKNIAAFIKEQLKE 251 (272)
Q Consensus 218 l~~~~~~~~~~~~~~~g~--~~~~~l~~~i~~~~~~ 251 (272)
++++..++.+ ..++.|. .+...+++.+.+..+.
T Consensus 119 ~~lid~~G~i-~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 119 TFIVDRKGII-RQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEEECTTSBE-EEEEESCCCTTSHHHHHHHHTTC--
T ss_pred EEEEcCCCCE-EEEEeCCCccchHHHHHHHHhhccc
Confidence 8888555544 3367786 4568888888876543
No 261
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.09 E-value=3.5e-10 Score=87.58 Aligned_cols=90 Identities=12% Similarity=0.327 Sum_probs=71.1
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCce------EEEEEeCCC-C-C-CCCC-------------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNL------VIAKIDASA-N-E-HPKL------------------- 210 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v------~~~~id~~~-~-~-~~~~------------------- 210 (272)
.+++++|+||++||++|+.+.+.+.++.+++++. .+ .++.|+++. . + +.++
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA-GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC-C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc-CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 4789999999999999999999999999999763 26 999999987 3 2 2222
Q ss_pred ------cccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 211 ------QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 211 ------~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++..+|+++++..++.+ ..++.|..+.+.|.++|++.+.
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRP-AAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCE-EEEECSCCCHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcE-EEEEcCCCCHHHHHHHHHHHHh
Confidence 57889988877544444 2368899999999999998764
No 262
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.09 E-value=5.6e-10 Score=83.67 Aligned_cols=89 Identities=12% Similarity=0.228 Sum_probs=69.8
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------------------------C-CC-CCCc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------------N-EH-PKLQ 211 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------------------------~-~~-~~~~ 211 (272)
.+++++|.||++||++|+...+.+.++..++.+. ++.++.|+++. + .+ ..++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT-TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 4789999999999999999999999999999874 49999999886 2 33 2679
Q ss_pred ccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 212 VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 212 v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
+.++|+++++..++.+ .+.. .+.+.|.++|++.+...
T Consensus 107 v~~~P~~~lid~~G~i---~~~~-~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKI---VAKE-LRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp CCSSCEEEEECTTSEE---EEEC-CCTTHHHHHHHHHHTSS
T ss_pred CCcCCeEEEECCCCeE---EEee-CCHHHHHHHHHHHHhhc
Confidence 9999999999544433 2221 35578888888877644
No 263
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.08 E-value=1.2e-09 Score=81.69 Aligned_cols=94 Identities=12% Similarity=0.184 Sum_probs=79.0
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc--------------------cchhHHhhcCCCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED--------------------LAKPFLTLFGLEE 87 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~--------------------~~~~l~~~~~i~~ 87 (272)
.+++++|.||++| ++|+...+.+.++++++.+ .+.|+.|+++... + ..+++.||+.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTD-RQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETT-SHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCc-hHHHHhcCCCC
Confidence 5678999999999 9999999999999999986 4999999987531 1 47999999999
Q ss_pred CCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCc
Q 024107 88 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGT 126 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~ 126 (272)
+ |++ .+++.++...+.+.|..+.+.+.+++...+.+.
T Consensus 104 ~-P~~-~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 104 L-PTT-FLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp S-CEE-EEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred C-CeE-EEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 9 999 788766555666678899999999999998754
No 264
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.07 E-value=8.9e-10 Score=72.49 Aligned_cols=72 Identities=10% Similarity=0.180 Sum_probs=60.8
Q ss_pred EEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCC-Ch
Q 024107 35 QVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL-TP 112 (272)
Q Consensus 35 ~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~-~~ 112 (272)
.|.||++| ++|+.+.|.+.++++.+.+.+.++.+| . .+++++|||.++ ||+ .+ +++ ... .|.. +.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~---~~~~~~~~v~~~-Pt~-~~--~G~-~~~--~G~~~~~ 69 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---E---MDQILEAGLTAL-PGL-AV--DGE-LKI--MGRVASK 69 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---S---HHHHHHHTCSSS-SCE-EE--TTE-EEE--CSSCCCH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---C---HHHHHHCCCCcC-CEE-EE--CCE-EEE--cCCCCCH
Confidence 57899999 999999999999999999889999998 4 689999999999 999 56 332 233 2776 88
Q ss_pred HHHHHHH
Q 024107 113 SNIEEFC 119 (272)
Q Consensus 113 ~~i~~fi 119 (272)
+.|.+++
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9888875
No 265
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.07 E-value=1.1e-10 Score=89.36 Aligned_cols=76 Identities=16% Similarity=0.250 Sum_probs=60.8
Q ss_pred ecccchhHHhhcCCCcEEEEEECCCChhHHHhHHH-H--HHHHHHhcCCCceEEEEEeCCCC-CCC-CC--------ccc
Q 024107 147 VVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQ-I--EKLAKHFKGLDNLVIAKIDASAN-EHP-KL--------QVE 213 (272)
Q Consensus 147 l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~-~--~~~a~~~~~~~~v~~~~id~~~~-~~~-~~--------~v~ 213 (272)
...+.|.... ..+++++|.||++||++|+.|.+. + .+++..+.. ++.++.+|.++. ++. .+ ++.
T Consensus 27 ~~~ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~~~q~~~gv~ 103 (173)
T 3ira_A 27 WGEEAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMTVCQIILGRG 103 (173)
T ss_dssp SSHHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCHHHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHHHHHHHcCCC
Confidence 3445666643 568999999999999999999984 3 577777776 799999999988 664 55 899
Q ss_pred CCCeEEEEe-CCC
Q 024107 214 EYPTLLFYP-AGD 225 (272)
Q Consensus 214 ~~P~l~~~~-~~~ 225 (272)
++|++++|. +|+
T Consensus 104 g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 104 GWPLNIIMTPGKK 116 (173)
T ss_dssp CSSEEEEECTTSC
T ss_pred CCcceeeECCCCC
Confidence 999999996 554
No 266
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.07 E-value=8.6e-10 Score=81.55 Aligned_cols=87 Identities=9% Similarity=0.102 Sum_probs=74.1
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhc-CceEEEEEeCCCc-----------------------ccchhHHhhcC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK-GKIMFTAVDIADE-----------------------DLAKPFLTLFG 84 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~-~~i~~~~vd~~~~-----------------------~~~~~l~~~~~ 84 (272)
.+++++|.||++| ++|+...+.+.++++++. ..+.|+.|+++.. .+ ..+++.|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSK-GELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSS-SHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCc-hhHHHhcC
Confidence 6789999999999 999999999999999998 4599999999641 11 58999999
Q ss_pred CCCCCceEEEEEeCCcceeecCCCCCChHHHHHHH
Q 024107 85 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFC 119 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi 119 (272)
+.++ |++ .+++.++...+.+.|..+.+.+.+++
T Consensus 112 v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 IITI-PTS-FLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CCEE-SEE-EEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred cCcc-CeE-EEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 9999 999 78876655556668999999998886
No 267
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.07 E-value=1.8e-09 Score=80.66 Aligned_cols=94 Identities=14% Similarity=0.172 Sum_probs=79.6
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc--------------------chhHHhhcCCCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL--------------------AKPFLTLFGLEE 87 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~--------------------~~~l~~~~~i~~ 87 (272)
.+++++|.||++| ++|+...+.+.++++.+.+. +.|+.|+++.... ...+++.||+.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 4678999999999 99999999999999999864 9999999887510 027999999999
Q ss_pred CCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 88 SKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+ |++ .+++.++...+.+.|..+.+.+.+++++.+.+
T Consensus 109 ~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 109 I-PRF-ILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp S-CCE-EEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred C-CEE-EEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 9 999 88886555666678889999999999998764
No 268
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.07 E-value=5e-11 Score=90.92 Aligned_cols=97 Identities=11% Similarity=0.030 Sum_probs=76.4
Q ss_pred cccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchh-HHhhcCC--CCCCceEEEEEeC
Q 024107 23 NSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKP-FLTLFGL--EESKNTVVTAFDN 98 (272)
Q Consensus 23 ~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~-l~~~~~i--~~~~P~i~~~~~~ 98 (272)
.+.....++++++|.||++| ++|+.+.|.|.++++.+...+.|+.||++.. .. ++..|++ .++ ||+ .+++.
T Consensus 38 ~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~---~~~~~~~~~~~~~~~-Pt~-~~~d~ 112 (164)
T 1sen_A 38 GKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDE---EEPKDEDFSPDGGYI-PRI-LFLDP 112 (164)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGG---GSCSCGGGCTTCSCS-SEE-EEECT
T ss_pred HHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCC---chHHHHHhcccCCcC-CeE-EEECC
Confidence 44445567789999999999 9999999999998877665678888999877 45 8899999 458 999 88854
Q ss_pred CcceeecCCC----------CCChHHHHHHHHHHhc
Q 024107 99 KAISKFLLES----------DLTPSNIEEFCSRLLH 124 (272)
Q Consensus 99 ~~~~~~~~~g----------~~~~~~i~~fi~~~~~ 124 (272)
++.....+.| ..+.+.|.+++.+.+.
T Consensus 113 ~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 113 SGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp TSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 4333344455 3789999999999875
No 269
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.07 E-value=7.3e-10 Score=83.03 Aligned_cols=92 Identities=13% Similarity=0.275 Sum_probs=70.8
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC------------------------CC-CCCccc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------------------------EH-PKLQVE 213 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~------------------------~~-~~~~v~ 213 (272)
.+++++|+||++||+.|+...+.+.++...+.+. ++.++.|+.+.+ .+ ..+++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK-PFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC
Confidence 4789999999999999999999999999999864 589999988874 12 246899
Q ss_pred CCCeEEEEeCCCCcCceEeeCCC--CHHHHHHHHHHHcCcC
Q 024107 214 EYPTLLFYPAGDKANPIKVSARS--SSKNIAAFIKEQLKEK 252 (272)
Q Consensus 214 ~~P~l~~~~~~~~~~~~~~~g~~--~~~~l~~~i~~~~~~~ 252 (272)
++|+++++..++.+ ..++.|.. +.+.+.++|++.....
T Consensus 106 ~~P~~~lid~~G~i-~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 106 GVPETFVIDRHGVI-LKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp SBCEEEEECTTSBE-EEEEESCCCTTSHHHHHHHHTC----
T ss_pred CCCeEEEECCCCcE-EEEEcCCCccccHHHHHHHHHHHHHh
Confidence 99988888554444 22677775 6679999998765543
No 270
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.06 E-value=3.7e-10 Score=84.84 Aligned_cols=87 Identities=17% Similarity=0.326 Sum_probs=67.6
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC------------------------CC-CCCccc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------------------------EH-PKLQVE 213 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~------------------------~~-~~~~v~ 213 (272)
.+++++|+||++||++|+.+.+.+.+++.+ + ++.+..|+++.. .+ ..+++.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K--RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T--TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C--CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC
Confidence 378999999999999999999999988776 3 688888876432 12 257899
Q ss_pred CCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 214 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 214 ~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++|+++++..++.+ ..++.|..+.+.|.++|++.+.
T Consensus 117 ~~P~~~~id~~G~i-~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 117 GVPETFVVGREGTI-VYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp SSCEEEEECTTSBE-EEEEESCCCHHHHHHTHHHHHH
T ss_pred ccCeEEEEcCCCCE-EEEEeCCCCHHHHHHHHHHHHH
Confidence 99987777444333 2268899999999999988764
No 271
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.05 E-value=7.8e-11 Score=79.70 Aligned_cols=74 Identities=11% Similarity=0.141 Sum_probs=58.7
Q ss_pred EEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-CCcccCCCeEEEEeCCCCcCceEeeCCCCHHHH
Q 024107 164 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNI 241 (272)
Q Consensus 164 lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l 241 (272)
+++|+++||++|+.+.+.+.+++..+ +..+|++.+ ++. ++++. +|++++ .+|+.+ .|..+.+.|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v-----~g~~~~~~L 68 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESAYGLR-VPVLRD-PMGREL-----DWPFDAPRL 68 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEE-----ESCCCHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEE-----eCCCCHHHH
Confidence 78999999999999999998774322 678999988 664 78888 999988 666532 288899999
Q ss_pred HHHHHHHcCc
Q 024107 242 AAFIKEQLKE 251 (272)
Q Consensus 242 ~~~i~~~~~~ 251 (272)
.+||.+.+..
T Consensus 69 ~~~l~~~~~~ 78 (87)
T 1ttz_A 69 RAWLDAAPHA 78 (87)
T ss_dssp HHHHHTCC--
T ss_pred HHHHHHHHHH
Confidence 9999876543
No 272
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.04 E-value=1.1e-09 Score=83.22 Aligned_cols=86 Identities=15% Similarity=0.325 Sum_probs=70.0
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC------------------CC---------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS------------------AN--------------- 205 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~------------------~~--------------- 205 (272)
.+++++|.||++||++|+.+.+.+.++.+++. ++.++.|+++ ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPS 112 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999998 5999999887 22
Q ss_pred --------CC-CCCcccCCCeEEEEeCCCCcCceEeeCCC-CHHHHHHHHHHHcC
Q 024107 206 --------EH-PKLQVEEYPTLLFYPAGDKANPIKVSARS-SSKNIAAFIKEQLK 250 (272)
Q Consensus 206 --------~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~-~~~~l~~~i~~~~~ 250 (272)
.+ ..|++.++|+++++..++.+ .+.|.. +.+.|.++|++.++
T Consensus 113 ~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i---~~~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 113 WIMVMDDGSLVEKFNVRSIDYIVIMDKSSNV---LYAGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp SEEEECCSHHHHHTTCCSSSEEEEEETTCCE---EEEEESCCHHHHHHHHHHC--
T ss_pred eeEEeChHHHHHHhCCCCceEEEEEcCCCcE---EEeCCCCCHHHHHHHHHHHhc
Confidence 12 25688999999999665544 347888 89999999988654
No 273
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.03 E-value=2.5e-09 Score=79.95 Aligned_cols=93 Identities=12% Similarity=0.024 Sum_probs=77.5
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeC-----------------------CCcccchhHHhhcC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDI-----------------------ADEDLAKPFLTLFG 84 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~-----------------------~~~~~~~~l~~~~~ 84 (272)
.+++++|.||++| ++|+...+.+.++++.+.+. +.|+.|+. +.. ..+++.||
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~ 103 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDAD---KAVGQAFG 103 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSS---CHHHHHHT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCch---HHHHHHcC
Confidence 5678999999999 99999999999999999864 88877764 233 58999999
Q ss_pred CCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcCcc
Q 024107 85 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHGTL 127 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 127 (272)
+.++ |++ .+++.++...+.+.|..+.+.+.+++.+.+.+..
T Consensus 104 i~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~ 144 (153)
T 2l5o_A 104 TQVY-PTS-VLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSD 144 (153)
T ss_dssp CCSS-SEE-EEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred CCcc-CeE-EEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhh
Confidence 9999 999 7886655455556888999999999999987643
No 274
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.99 E-value=2.6e-09 Score=79.21 Aligned_cols=88 Identities=9% Similarity=0.035 Sum_probs=72.8
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchh-------------------------HHhh
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKP-------------------------FLTL 82 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~~~~-------------------------l~~~ 82 (272)
.+++++|.||++| ++|....|.+.++++.+.+. +.|+.|+++.. .+ +++.
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK---DEEWLKFIRSKKIGGWLNVRDSKNHTDFKIT 106 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS---SHHHHHHHHHHTCTTSEEEECTTCCCCHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC---HHHHHHHHHHcCCCCceEEeccccchhHHHh
Confidence 5678999999999 99999999999999999876 99999999866 45 9999
Q ss_pred cCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 83 FGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 83 ~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
||+.++ |++ .+++.++...+.+.|..+.+.+.+.+.+.
T Consensus 107 ~~i~~~-P~~-~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 107 YDIYAT-PVL-YVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp HCCCSS-CEE-EEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred cCcCCC-CEE-EEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 999999 999 88876655666666766666666655554
No 275
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.99 E-value=5e-10 Score=84.85 Aligned_cols=105 Identities=7% Similarity=-0.041 Sum_probs=81.6
Q ss_pred ceEeeCcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeC----------------------
Q 024107 15 LVTKLTDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDI---------------------- 70 (272)
Q Consensus 15 ~v~~l~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~---------------------- 70 (272)
.+..++.+.+......+++++|.||++| ++|+...|.+.++++++.+ .+.|+.|++
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 4555566555554456789999999999 9999999999999998753 366655553
Q ss_pred ------CCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 71 ------ADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 71 ------~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+.. ..+++.|||.++ |++ .+++.++...+.+.|..+.+.+.+++++.+.
T Consensus 102 ~~~~~~d~~---~~~~~~~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 102 KLPVVTDNG---GTIAQNLNISVY-PSW-ALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TSCEEECTT---CHHHHHTTCCSS-SEE-EEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cceEEEcCc---hHHHHHcCCCcc-ceE-EEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 223 589999999999 999 7886655556666888999999999998764
No 276
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.98 E-value=5.4e-09 Score=77.48 Aligned_cols=89 Identities=10% Similarity=0.036 Sum_probs=73.2
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHh-cCc-eEEEEEeCCCcc-----------------------cchhHHhhc
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNF-KGK-IMFTAVDIADED-----------------------LAKPFLTLF 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~-~~~-i~~~~vd~~~~~-----------------------~~~~l~~~~ 83 (272)
++++++|.||++| ++|+...|.+.++++++ .+. +.|+.|+++... + ..+++.|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLS-SETAKQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGG-CHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcc-hHHHHhc
Confidence 5689999999999 99999999999999999 664 999999888641 1 4899999
Q ss_pred CCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 84 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 84 ~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
|+.++ |++ .+++.++...+.+. +.+.+.+++.+.++
T Consensus 111 ~v~~~-P~~-~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 111 AILTL-PTN-ILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp TCCSS-SEE-EEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred CCCCc-CEE-EEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 99999 999 78866554444332 88999999998764
No 277
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.98 E-value=5e-09 Score=78.20 Aligned_cols=94 Identities=13% Similarity=0.106 Sum_probs=76.0
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc-------------------chhHHhhcCCCCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL-------------------AKPFLTLFGLEES 88 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~-------------------~~~l~~~~~i~~~ 88 (272)
.+++++|.||++| ++|....+.+.++++++.+. +.|+.|+++.... ...+++.||+.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 5678999999999 99999999999999999875 9999999886510 0168899999999
Q ss_pred CceEEEEEeCCcceeecCCCC--CChHHHHHHHHHHhcC
Q 024107 89 KNTVVTAFDNKAISKFLLESD--LTPSNIEEFCSRLLHG 125 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~--~~~~~i~~fi~~~~~~ 125 (272)
|++ .+++.++...+.+.|. .+.+.+.+++.+.+.+
T Consensus 107 -P~~-~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 107 -PTS-FLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp -SEE-EEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred -CeE-EEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 999 7887665555555664 4568999999998765
No 278
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.97 E-value=4e-09 Score=76.92 Aligned_cols=91 Identities=14% Similarity=0.084 Sum_probs=74.5
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc-------------------------ccchhHHhhc
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE-------------------------DLAKPFLTLF 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~-------------------------~~~~~l~~~~ 83 (272)
++++++|.||++| ++|....+.+.++++++.+.+.++.|++... +....+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 5678999999999 9999999999999999887899999864320 0014799999
Q ss_pred CCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 84 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 84 ~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
|+.++ |++ .+++.++...+.+.|..+.+.+.++++++
T Consensus 101 ~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 101 GVRSY-PTQ-AFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TCCSS-SEE-EEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred CcccC-CeE-EEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99999 999 88876655566678899999999998763
No 279
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.97 E-value=1.2e-09 Score=85.50 Aligned_cols=91 Identities=11% Similarity=0.204 Sum_probs=70.8
Q ss_pred CC-cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------------C-CC-
Q 024107 160 HK-DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------------N-EH- 207 (272)
Q Consensus 160 ~~-~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-----------------------------~-~~- 207 (272)
++ +++|+||++||++|+...+.+.++..++.+. ++.+..|+++. + .+
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 44 5999999999999999999999999999863 48999998842 2 22
Q ss_pred CCCcccCCCeEEEEeCCCCcCceE---------eeCCCCHHHHHHHHHHHcCcC
Q 024107 208 PKLQVEEYPTLLFYPAGDKANPIK---------VSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 208 ~~~~v~~~P~l~~~~~~~~~~~~~---------~~g~~~~~~l~~~i~~~~~~~ 252 (272)
..|++.++|+++++..++.+ ..+ +.|..+.+.|.+.|++.+...
T Consensus 124 ~~~~v~~~P~~~lid~~G~i-~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKC-VYRGQLDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp HHHTCCEESEEEEEETTCBE-EEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred HHhCCCCCCeEEEEcCCCeE-EEccccCcccccccCccCHHHHHHHHHHHHcCC
Confidence 25688999999999655444 113 346678899999999987644
No 280
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.97 E-value=4.5e-09 Score=79.19 Aligned_cols=91 Identities=12% Similarity=0.081 Sum_probs=77.3
Q ss_pred CCcceEEEEEEcc-cchHH-HHHHHHHHHHHhcCc-eEEEEEeCC----------------------------Ccccchh
Q 024107 30 SPIKLQVYVFAKA-DDLKS-LLEPLEDIARNFKGK-IMFTAVDIA----------------------------DEDLAKP 78 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~-~~~~~~~~a~~~~~~-i~~~~vd~~----------------------------~~~~~~~ 78 (272)
++++++|.||++| ++|.. ..|.+.++++++.++ +.|+.|+++ .. ..
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~ 105 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMP---RE 105 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC---CT
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCc---cc
Confidence 4679999999999 99999 699999999999865 999999863 11 23
Q ss_pred ------HHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 79 ------FLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 79 ------l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+++.||+.+. |++ .+++.++...+.+.|..+.+.+.+++.+.+..
T Consensus 106 ~~~~~~~~~~~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 106 GQRIPSTMKKYRLEGT-PSI-ILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp TCSSCHHHHHTTCCSS-SEE-EEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred cchhhhHHHhcccCcc-ceE-EEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 8999999999 999 78876666666678999999999999998763
No 281
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.97 E-value=9.7e-10 Score=78.04 Aligned_cols=88 Identities=9% Similarity=-0.106 Sum_probs=68.1
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-----eEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCccee
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-----IMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISK 103 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-----i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~ 103 (272)
+....+|+||++| ++|+.+.+. ++..+... +.+..||.+.+.. .+++.+++|.+. ||| ++|.+|. ..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~~-~~la~~~~V~g~-PT~-i~f~~G~-ev 89 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPLP-PGLELARPVTFT-PTF-VLMAGDV-ES 89 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCCC-TTCBCSSCCCSS-SEE-EEEETTE-EE
T ss_pred cCCCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCCc-hhHHHHCCCCCC-CEE-EEEECCE-EE
Confidence 3457899999999 999999864 44444432 7788888887533 589999999999 999 8888554 34
Q ss_pred ecCCCCCChHHHHHHHHHHhc
Q 024107 104 FLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 104 ~~~~g~~~~~~i~~fi~~~~~ 124 (272)
.++.|....+.+.+|+.+.+.
T Consensus 90 ~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 90 GRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EEEECCCCHHHHHHHHHHHHH
T ss_pred eeecCCCCHHHHHHHHHHHHh
Confidence 456899999999999999864
No 282
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.97 E-value=1.9e-09 Score=80.86 Aligned_cols=85 Identities=9% Similarity=0.118 Sum_probs=67.1
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C-----------------------C-CCCcccC
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-----------------------H-PKLQVEE 214 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~-----------------------~-~~~~v~~ 214 (272)
+++++|.||++||++|+...+.+.++.+++++. ++.++.|+++.. + + ..|++.+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 689999999999999999999999999999874 499999998875 2 2 2458889
Q ss_pred CCeEEEEeCCCCcCceEeeCCCCHHHHHHHHH
Q 024107 215 YPTLLFYPAGDKANPIKVSARSSSKNIAAFIK 246 (272)
Q Consensus 215 ~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~ 246 (272)
+|+++++..++.+ ..++.|..+.+....-+.
T Consensus 114 ~P~~~lid~~G~i-~~~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 114 LPSVFLVNRNNEL-SARGENIKDLDEAIKKLL 144 (152)
T ss_dssp CSEEEEEETTTEE-EEETTTCSCHHHHHHHHH
T ss_pred CceEEEECCCCeE-EEecCCHHHHHHHHHHHH
Confidence 9999999655444 236778877766555444
No 283
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.96 E-value=9.3e-10 Score=84.14 Aligned_cols=113 Identities=9% Similarity=0.065 Sum_probs=83.4
Q ss_pred HHHHhhcCCCceEee--CcccccccccCCcceEEEEEEcc-cchHHHHH-HH--HHHHHHhcCceEEEEEeCCCcccchh
Q 024107 5 LQFLNYNKFPLVTKL--TDINSASVHSSPIKLQVYVFAKA-DDLKSLLE-PL--EDIARNFKGKIMFTAVDIADEDLAKP 78 (272)
Q Consensus 5 ~~fi~~~s~~~v~~l--~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~-~~--~~~a~~~~~~i~~~~vd~~~~~~~~~ 78 (272)
+-+++.++...|... +++.|......+++++|.|+++| ++|+.+.+ .| .++++.+++.+.++.||.++. ++
T Consensus 11 spyl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~---~~ 87 (173)
T 3ira_A 11 SPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREER---PD 87 (173)
T ss_dssp CHHHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTC---HH
T ss_pred CHHHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCccc---Cc
Confidence 346666666655443 45667777788899999999999 99999999 33 578888877799999999988 89
Q ss_pred HHhhc--------CCCCCCceEEEEEeCCcceeec--C---CCCCChHHHHHHHHHH
Q 024107 79 FLTLF--------GLEESKNTVVTAFDNKAISKFL--L---ESDLTPSNIEEFCSRL 122 (272)
Q Consensus 79 l~~~~--------~i~~~~P~i~~~~~~~~~~~~~--~---~g~~~~~~i~~fi~~~ 122 (272)
+.+.| |+.+. |++ .++++++...+. | .+..+...+.+++..+
T Consensus 88 l~~~y~~~~q~~~gv~g~-Pt~-v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v 142 (173)
T 3ira_A 88 IDNIYMTVCQIILGRGGW-PLN-IIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRI 142 (173)
T ss_dssp HHHHHHHHHHHHHSCCCS-SEE-EEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCC-cce-eeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHH
Confidence 99888 99999 999 888755433332 1 2233445566666554
No 284
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.96 E-value=7.5e-09 Score=77.42 Aligned_cols=91 Identities=12% Similarity=0.064 Sum_probs=74.2
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc----------------------chhHHhhcCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL----------------------AKPFLTLFGL 85 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~----------------------~~~l~~~~~i 85 (272)
.+++++|.||++| ++|+...|.+.++++++.++ +.|+.|+++.... ...+++.||+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 5678999999999 99999999999999999875 9999999986210 1689999999
Q ss_pred CCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 86 EESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 86 ~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
.++ |++ .+++.++...+.+ .+.+.+.+++.+++.+
T Consensus 108 ~~~-P~~-~lid~~G~i~~~~---~~~~~l~~~l~~l~~~ 142 (152)
T 2lrn_A 108 VGF-PHI-ILVDPEGKIVAKE---LRGDDLYNTVEKFVNG 142 (152)
T ss_dssp CSS-CEE-EEECTTSEEEEEC---CCTTHHHHHHHHHHTS
T ss_pred CcC-CeE-EEECCCCeEEEee---CCHHHHHHHHHHHHhh
Confidence 999 999 7886654444443 3567899999998764
No 285
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.96 E-value=2.3e-09 Score=91.32 Aligned_cols=90 Identities=12% Similarity=0.248 Sum_probs=73.3
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC---------------------------C-CC-CC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------------------------N-EH-PK 209 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~---------------------------~-~~-~~ 209 (272)
.+++++|+||++||++|+.+.|.+.++++++++. ++.++.|+++. + .+ ..
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~-~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS-GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC-CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 3789999999999999999999999999999863 59999998753 1 22 25
Q ss_pred CcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 210 LQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 210 ~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
|++..+|+++++..++.+ ..++.|..+.+.|.++|++.+.
T Consensus 160 ygV~~~Pt~~lID~~G~I-v~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTV-RHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TTCCEESEEEEECTTSBE-EEEEESBCCHHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeE-EEEEcCCCCHHHHHHHHHHHHh
Confidence 789999999999544444 3368898899999999998774
No 286
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.95 E-value=7.8e-09 Score=78.41 Aligned_cols=91 Identities=11% Similarity=0.207 Sum_probs=73.5
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC------------------Cccc---------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA------------------DEDL--------------- 75 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~------------------~~~~--------------- 75 (272)
++++++|.||++| ++|+...|.+.++++++. .+.|+.|+++ ....
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 5689999999999 999999999999999999 6999999987 2200
Q ss_pred ----chhHHhhcCCCCCCceEEEEEeCCcceeecCCCCC-ChHHHHHHHHHHhcC
Q 024107 76 ----AKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDL-TPSNIEEFCSRLLHG 125 (272)
Q Consensus 76 ----~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~-~~~~i~~fi~~~~~~ 125 (272)
...+++.|++.++ |++ .+++.++...+ .|.. +.+.+.+++.+.++|
T Consensus 115 ~~~d~~~~~~~~~v~~~-P~~-~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSI-DYI-VIMDKSSNVLY--AGTTPSLGELESVIKSVQGG 165 (165)
T ss_dssp EEECCSHHHHHTTCCSS-SEE-EEEETTCCEEE--EEESCCHHHHHHHHHHC---
T ss_pred EEeChHHHHHHhCCCCc-eEE-EEEcCCCcEEE--eCCCCCHHHHHHHHHHHhcC
Confidence 0178999999999 999 78876654555 6777 999999999987653
No 287
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.94 E-value=4.1e-09 Score=78.91 Aligned_cols=87 Identities=9% Similarity=-0.014 Sum_probs=75.4
Q ss_pred cceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeC---------------------------CCcccchhHHhhc
Q 024107 32 IKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI---------------------------ADEDLAKPFLTLF 83 (272)
Q Consensus 32 ~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~---------------------------~~~~~~~~l~~~~ 83 (272)
++++|.||++| ++|....+.+.++++++ .+.|+.|++ +.. ..+++.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP---HEVAARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH---HHHHTTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch---HHHHHHh
Confidence 78999999999 99999999999999999 589999998 233 6899999
Q ss_pred CCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 84 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 84 ~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
|+.++ |++ .+++.++...+.+.|..+.+.+.+++++...+
T Consensus 106 ~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 106 KVLGQ-PWT-FVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp SBCSS-CEE-EEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred CCCcc-cEE-EEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 99999 999 77776655566668889999999999998654
No 288
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.93 E-value=3.3e-09 Score=80.78 Aligned_cols=66 Identities=24% Similarity=0.368 Sum_probs=55.7
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C------------------------C-CCCcc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E------------------------H-PKLQV 212 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~------------------------~-~~~~v 212 (272)
.+++++|+||++||++|+.+.|.+.++++++++..++.++.|+++.. + + ..|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 47899999999999999999999999999998633788988888765 1 1 25689
Q ss_pred cCCCeEEEEeCC
Q 024107 213 EEYPTLLFYPAG 224 (272)
Q Consensus 213 ~~~P~l~~~~~~ 224 (272)
.++|+++++..+
T Consensus 127 ~~~Pt~~lid~~ 138 (165)
T 3s9f_A 127 ESIPTLIGLNAD 138 (165)
T ss_dssp CSSSEEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 999999999854
No 289
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.93 E-value=2.6e-09 Score=79.40 Aligned_cols=64 Identities=19% Similarity=0.284 Sum_probs=54.5
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------------CC-CCCcc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------------EH-PKLQV 212 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------------------~~-~~~~v 212 (272)
.+++++|+||++||++|+.+.+.+.++++++++..++.++.|+++.. .+ ..+++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 47899999999999999999999999999998423789999988763 12 25789
Q ss_pred cCCCeEEEEe
Q 024107 213 EEYPTLLFYP 222 (272)
Q Consensus 213 ~~~P~l~~~~ 222 (272)
.++|+++++.
T Consensus 107 ~~~Pt~~lid 116 (146)
T 1o8x_A 107 ESIPTLIGVD 116 (146)
T ss_dssp CSSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999999998
No 290
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.93 E-value=2.7e-09 Score=79.10 Aligned_cols=78 Identities=17% Similarity=0.156 Sum_probs=59.9
Q ss_pred eEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC------------------
Q 024107 144 VQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------------------ 205 (272)
Q Consensus 144 v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~------------------ 205 (272)
+..++++.+.-.- -.+++++|+||++||++|+.+.|.+.+++++++...++.++.|+++..
T Consensus 13 l~~~~g~~~~l~~-~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 13 VLKGAAADIALPS-LAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEETTEEEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEcCCCCEecHHH-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 4455554433221 246899999999999999999999999999998423799999988763
Q ss_pred -------CC-CCCcccCCCeEEEEe
Q 024107 206 -------EH-PKLQVEEYPTLLFYP 222 (272)
Q Consensus 206 -------~~-~~~~v~~~P~l~~~~ 222 (272)
.+ ..+++.++|+++++.
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid 116 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVE 116 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEE
Confidence 12 256899999999997
No 291
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.91 E-value=3.1e-09 Score=81.80 Aligned_cols=86 Identities=19% Similarity=0.299 Sum_probs=66.8
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC------------------------CC-CCCccc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------------------------EH-PKLQVE 213 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~------------------------~~-~~~~v~ 213 (272)
.+++++|+||++||++|+...+.+.++.++ ++.++.|+++.. .+ ..|++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC
Confidence 378999999999999999999999998876 367777774321 12 145889
Q ss_pred CCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 214 EYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 214 ~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++|+++++..++.+ ..++.|..+.+.+.++|.+.+.
T Consensus 132 ~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 132 GAPETYLIDKQGII-RHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp SSCEEEEECTTCBE-EEEEESCCCHHHHHHHTHHHHH
T ss_pred CCCeEEEECCCCeE-EEEEcCCCCHHHHHHHHHHHHH
Confidence 99998888655544 3368899999999999988765
No 292
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.90 E-value=4.3e-09 Score=81.73 Aligned_cols=89 Identities=15% Similarity=0.275 Sum_probs=70.5
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------------C-CC-
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------------N-EH- 207 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-----------------------------~-~~- 207 (272)
.+++++|.||++||++|+...+.+.++.+++.+ ++.++.|+++. + .+
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRG--KVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT--TEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc--CeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHH
Confidence 368999999999999999999999999999987 49999998842 2 22
Q ss_pred CCCcccCCCeEEEEeCCCCcCceEeeCC----------CCHHHHHHHHHHHcCcC
Q 024107 208 PKLQVEEYPTLLFYPAGDKANPIKVSAR----------SSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 208 ~~~~v~~~P~l~~~~~~~~~~~~~~~g~----------~~~~~l~~~i~~~~~~~ 252 (272)
..|++.++|+++++..++.+ ++.|. .+.+.|.+.|++.+...
T Consensus 110 ~~~~v~~~P~~~lid~~G~i---~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 110 KAYRALRTPEVFLFDERRLL---RYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp HHTTCCEESEEEEECTTCBE---EEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred HHcCCCCCCeEEEECCCCcE---EEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 25789999999999655443 34343 36789999999988644
No 293
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.90 E-value=1.1e-08 Score=76.99 Aligned_cols=94 Identities=10% Similarity=0.060 Sum_probs=76.8
Q ss_pred CCcceEEEEEEcc-cchHHH-HHHHHHHHHHhcC-ceEEEEEeCCCc-------------------------ccch----
Q 024107 30 SPIKLQVYVFAKA-DDLKSL-LEPLEDIARNFKG-KIMFTAVDIADE-------------------------DLAK---- 77 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~-~~~~~~~a~~~~~-~i~~~~vd~~~~-------------------------~~~~---- 77 (272)
.+++++|.||++| ++|... .|.+.++++++.+ .+.|+.|+++.. +...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 4679999999999 999995 9999999999984 499999886410 0001
Q ss_pred -hHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 78 -PFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 78 -~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
.+++.||+.++ |++ .+++.++...+.+.|..+.+.+.+++.+.+..
T Consensus 107 ~~~~~~~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 107 PRTMAAYQMRGT-PSL-LLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp CHHHHHTTCCSS-SEE-EEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCCC-CEE-EEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 58999999999 999 78876665666678899999999999998863
No 294
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.89 E-value=3.2e-09 Score=78.59 Aligned_cols=64 Identities=23% Similarity=0.380 Sum_probs=54.0
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCC-------------------------C-CCCcc
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE-------------------------H-PKLQV 212 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~-------------------------~-~~~~v 212 (272)
.+++++|+||++||++|+.+.|.+.++++++++..++.++.|+++... + ..+++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 478999999999999999999999999999983237899999887631 2 14589
Q ss_pred cCCCeEEEEe
Q 024107 213 EEYPTLLFYP 222 (272)
Q Consensus 213 ~~~P~l~~~~ 222 (272)
.++|+++++.
T Consensus 107 ~~~Pt~~lid 116 (144)
T 1o73_A 107 ESIPTLITIN 116 (144)
T ss_dssp CSSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999999998
No 295
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.88 E-value=1.6e-08 Score=78.06 Aligned_cols=90 Identities=10% Similarity=0.138 Sum_probs=74.0
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-e------EEEEEeCCC-cccchhHHhhc-----------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-I------MFTAVDIAD-EDLAKPFLTLF----------------- 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i------~~~~vd~~~-~~~~~~l~~~~----------------- 83 (272)
++++++|.||++| ++|....|.|.++++++.++ + .|+.|+++. . ++.++.|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~---~~~~~~~~~~~~~~~~~~~d~~~~ 134 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYS---RDIAQDFVTDNGLDYPSIYDPPFM 134 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCC---HHHHHHHHHHTTCCSCEEECTTCG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCC---HHHHHHHHHHcCCCccEEECCcch
Confidence 4678999999999 99999999999999999865 7 999999987 4 4555555
Q ss_pred --------CCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 84 --------GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 84 --------~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
++.++ |++ .+++.++...+.+.|..+.+.|.+++.+.+.
T Consensus 135 ~~~~~~~~~v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 135 TAASLGGVPASVI-PTT-IVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGGGTTTCCTTCC-SEE-EEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCC-CeE-EEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 67888 988 6776665566667888999999999999864
No 296
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=1.3e-08 Score=75.97 Aligned_cols=87 Identities=10% Similarity=0.280 Sum_probs=68.3
Q ss_pred CCCcEEEEEECCCChh--HHHhHHHHHHHHHHh-cCCCceEEEEEeCCCCC--------------------------C-C
Q 024107 159 SHKDVLLEVYTPWCVT--CETTSKQIEKLAKHF-KGLDNLVIAKIDASANE--------------------------H-P 208 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~--c~~~~~~~~~~a~~~-~~~~~v~~~~id~~~~~--------------------------~-~ 208 (272)
.+++++|.||++||++ |+...+.+.++.+++ ++. ++.+..|+.+... + .
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK-YIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAK 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS-SEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC-CeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHH
Confidence 3689999999999999 999999999999999 553 5999999887642 2 2
Q ss_pred CCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 209 KLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 209 ~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
.|++.++|+++++..++.+ ++.. .+.+.|.+.|++.+.
T Consensus 111 ~~~v~~~P~~~lid~~G~i---~~~~-~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKI---LAKN-LRGEELKKKIENIVE 148 (150)
T ss_dssp HTTCCSSSEEEEECTTSBE---EEES-CCHHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEE---EEcc-CCHHHHHHHHHHHHh
Confidence 5789999999999554443 2333 378888888887653
No 297
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.87 E-value=8.3e-09 Score=77.30 Aligned_cols=91 Identities=12% Similarity=0.128 Sum_probs=72.7
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------ccchhHHhhcCCCCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------DLAKPFLTLFGLEES 88 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~--------------------~~~~~l~~~~~i~~~ 88 (272)
.+++++|.||++| ++|....|.+.+++++ +++.|+.|+++.. +....+++.||+.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 4678999999999 9999999999999887 5588888886431 001578999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
|++ .+++.++...+.+.|..+.+.+.+++.+.+.
T Consensus 119 -P~~-~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 119 -PET-FVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp -CEE-EEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred -CeE-EEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 988 6776555455566888999999999998764
No 298
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.86 E-value=6.7e-10 Score=91.72 Aligned_cols=70 Identities=14% Similarity=0.241 Sum_probs=55.2
Q ss_pred cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC------C-CC-CCCcccCCCeEEEEeCCCCcCceEee
Q 024107 162 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA------N-EH-PKLQVEEYPTLLFYPAGDKANPIKVS 233 (272)
Q Consensus 162 ~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~------~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~ 233 (272)
..+++||+|||++|+.+.|.++++++++. .+|++. + ++ .+++|.++||+++ +|+ ++.
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l~--------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~-----~~~ 263 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR-----TYT 263 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE-----EEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHcC--------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE-----Eec
Confidence 34799999999999999999999986652 344441 3 34 3889999999654 553 499
Q ss_pred CCCCHHHHHHHHH
Q 024107 234 ARSSSKNIAAFIK 246 (272)
Q Consensus 234 g~~~~~~l~~~i~ 246 (272)
|..+.+.|.+|+.
T Consensus 264 G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 264 GVRSLEALAVASG 276 (291)
T ss_dssp SCCCHHHHHHHTC
T ss_pred CCCCHHHHHHHHC
Confidence 9999999999986
No 299
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.85 E-value=1.1e-08 Score=81.62 Aligned_cols=90 Identities=16% Similarity=0.286 Sum_probs=70.6
Q ss_pred CC-cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------------C-CC-
Q 024107 160 HK-DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------------N-EH- 207 (272)
Q Consensus 160 ~~-~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-----------------------------~-~~- 207 (272)
++ .++|+||++||+.|+...+.+.++.+++++. .+.++.|+++. . .+
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~ 136 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ-GLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVA 136 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT-TEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHH
Confidence 55 5999999999999999999999999999874 49999999842 2 22
Q ss_pred CCCcccCCCeEEEEeCCCCcCceEeeC-----------CCCHHHHHHHHHHHcCcCC
Q 024107 208 PKLQVEEYPTLLFYPAGDKANPIKVSA-----------RSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 208 ~~~~v~~~P~l~~~~~~~~~~~~~~~g-----------~~~~~~l~~~i~~~~~~~~ 253 (272)
..|++..+|+++++..++.+ +|.| ..+.+.|.+.|++.+....
T Consensus 137 ~~~~v~~~P~~~liD~~G~i---~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 137 KAYGAACTPDFFLYDRERRL---VYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp HHHTCCEESEEEEECTTCBE---EEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred HHcCCCCCCeEEEECCCCcE---EEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 25689999999999655543 4554 2457899999999886543
No 300
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.85 E-value=5.1e-09 Score=78.46 Aligned_cols=98 Identities=10% Similarity=0.207 Sum_probs=73.9
Q ss_pred cchhHHh---hcCCCcEEEEEECCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCCCC---C-CCCcccCCCeEE
Q 024107 150 KTFDDLV---LNSHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASANE---H-PKLQVEEYPTLL 219 (272)
Q Consensus 150 ~~~~~~v---~~~~~~~lv~f~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~~~---~-~~~~v~~~P~l~ 219 (272)
.+|++.+ ...+++++|+||++||..|+.|.... .+++..++. ++.+..+|.+..+ + ..|++.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEGQRYIQFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHHHHHHHHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhHHHHHHHcCCCCCCEEE
Confidence 3555554 34489999999999999999997665 566666655 6999999996542 2 367999999999
Q ss_pred EEeC--CCCcCceEeeCCCCHHHHHHHHHHHcCcC
Q 024107 220 FYPA--GDKANPIKVSARSSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 220 ~~~~--~~~~~~~~~~g~~~~~~l~~~i~~~~~~~ 252 (272)
++.. |+.+. ++.| .+.+.++++|++.+...
T Consensus 107 fld~~~G~~l~--~~~g-~~~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 107 ILDPRTGQKLV--EWHQ-LDVSSFLDQVTGFLGEH 138 (153)
T ss_dssp EECTTTCCCCE--EESS-CCHHHHHHHHHHHHHHT
T ss_pred EEeCCCCcEee--ecCC-CCHHHHHHHHHHHHHhc
Confidence 9965 34443 4555 89999999999887544
No 301
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.84 E-value=9.2e-09 Score=78.25 Aligned_cols=88 Identities=15% Similarity=0.155 Sum_probs=71.8
Q ss_pred cCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-----------------------CcccchhHHhhcC
Q 024107 29 SSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA-----------------------DEDLAKPFLTLFG 84 (272)
Q Consensus 29 ~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~-----------------------~~~~~~~l~~~~~ 84 (272)
.++++++|.||++| ++|+...|.+.+++++ .+.|+.|+++ .. ..+++.||
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~ 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGD---GMLGLDLG 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT---CHHHHHHT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcc---hHHHHHcC
Confidence 46789999999999 9999999999999987 4777777743 33 57999999
Q ss_pred CCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 85 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+.++ |++ .+++.++...+.+.|..+.+.+.+++.+.+.
T Consensus 123 v~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 123 VYGA-PET-FLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp CCSS-SEE-EEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred cccc-CEE-EEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 9999 977 5666555555666888999999999988764
No 302
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.81 E-value=4.3e-09 Score=80.22 Aligned_cols=95 Identities=9% Similarity=-0.098 Sum_probs=69.4
Q ss_pred eCccccccccc-CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcC---CCCCCceEE
Q 024107 19 LTDINSASVHS-SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFG---LEESKNTVV 93 (272)
Q Consensus 19 l~~~~f~~~~~-~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~---i~~~~P~i~ 93 (272)
++++.+..+.. ++++++|.|+++| ++|+...|.+.++++.+. .+.|..||.+.. ++++..|+ +.+. ||+
T Consensus 41 ~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~---~~~~~~~~~~~v~~i-Pt~- 114 (167)
T 1z6n_A 41 LPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRA---EDDLRQRLALERIAI-PLV- 114 (167)
T ss_dssp CCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHH---HHHTTTTTTCSSCCS-SEE-
T ss_pred CCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCC---HHHHHHHHHcCCCCc-CeE-
Confidence 44444444432 4568899999999 999999999999999886 499999999988 88999897 9999 999
Q ss_pred EEEeCCcceeecCCCCCChHHHHHHHHH
Q 024107 94 TAFDNKAISKFLLESDLTPSNIEEFCSR 121 (272)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 121 (272)
.++++++.....+ |... ..+.+++.+
T Consensus 115 i~~~~~G~~~~~~-g~~p-~~~~~~i~~ 140 (167)
T 1z6n_A 115 LVLDEEFNLLGRF-VERP-QAVLDGGPQ 140 (167)
T ss_dssp EEECTTCCEEEEE-ESSC-HHHHHHCHH
T ss_pred EEECCCCCEEEEE-cCCC-HHHHHhHHH
Confidence 7888753333333 3332 334444444
No 303
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.81 E-value=4.1e-08 Score=73.87 Aligned_cols=87 Identities=11% Similarity=0.210 Sum_probs=70.2
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhc-CceEEEEEeCCC-------------------cccchhHHhhcCCCCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK-GKIMFTAVDIAD-------------------EDLAKPFLTLFGLEES 88 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~-~~i~~~~vd~~~-------------------~~~~~~l~~~~~i~~~ 88 (272)
++++++|.||++| ++|....+.+.++++++. ..+.|+.|+++. . ..+++.||+.++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~v~~~ 116 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDAT---GQVQQRYGANRL 116 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTT---SHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECch---HHHHHHhCCCCc
Confidence 5678999999999 999999999999999998 459999999987 4 689999999999
Q ss_pred CceEEEEEeCCcceeecCCCC--CChHHHHHHHHH
Q 024107 89 KNTVVTAFDNKAISKFLLESD--LTPSNIEEFCSR 121 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~--~~~~~i~~fi~~ 121 (272)
|++ .+++.++...+.+.|. .+..++.+.+.+
T Consensus 117 -P~~-~lid~~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 117 -PDT-FIVDRKGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp -SEE-EEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred -ceE-EEEcCCCCEEEEEeCCCccchHHHHHHHHh
Confidence 998 7777665555656665 445555555544
No 304
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.81 E-value=6.7e-08 Score=71.97 Aligned_cols=90 Identities=11% Similarity=0.130 Sum_probs=72.8
Q ss_pred CCcceEEEEEEcc-cc--hHHHHHHHHHHHHHh-cCc-eEEEEEeCCCccc----------------------chhHHhh
Q 024107 30 SPIKLQVYVFAKA-DD--LKSLLEPLEDIARNF-KGK-IMFTAVDIADEDL----------------------AKPFLTL 82 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~--c~~~~~~~~~~a~~~-~~~-i~~~~vd~~~~~~----------------------~~~l~~~ 82 (272)
.+++++|.||++| ++ |....|.+.++++++ .++ +.|+.|+++.... ...+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4679999999999 99 999999999999999 654 9999998886510 0379999
Q ss_pred cCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 83 FGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 83 ~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
||+.+. |++ .+++.++...+.+ .+.+.+.+.+.+.+.
T Consensus 112 ~~v~~~-P~~-~lid~~G~i~~~~---~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 112 YSIYKI-PAN-ILLSSDGKILAKN---LRGEELKKKIENIVE 148 (150)
T ss_dssp TTCCSS-SEE-EEECTTSBEEEES---CCHHHHHHHHHHHHH
T ss_pred cCCCcc-CeE-EEECCCCEEEEcc---CCHHHHHHHHHHHHh
Confidence 999999 999 8887665555543 378889888888753
No 305
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.80 E-value=1.2e-08 Score=75.38 Aligned_cols=83 Identities=10% Similarity=0.153 Sum_probs=63.7
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCC---------------------------C-CCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE---------------------------H-PKL 210 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~---------------------------~-~~~ 210 (272)
.+++++|+||++||++|+...|.+.++.++++.. ++.+..|+.+... + ..|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 3689999999999999999999999999999864 6999999887431 1 146
Q ss_pred cccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHH
Q 024107 211 QVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIK 246 (272)
Q Consensus 211 ~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~ 246 (272)
++.++|+.+++..++.+ .+.+ .+.+.|.+.|+
T Consensus 110 ~v~~~P~~~lid~~G~i---~~~~-~~~~~l~~~l~ 141 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVI---IAAN-VTPEKLTEILK 141 (143)
T ss_dssp TGGGCCCEEEECTTSBE---EEES-CCHHHHHHHHT
T ss_pred CCCCCCcEEEECCCCEE---EEcc-CCHHHHHHHHH
Confidence 88999999999755543 2332 35677777665
No 306
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.79 E-value=3.5e-08 Score=76.92 Aligned_cols=92 Identities=16% Similarity=0.213 Sum_probs=75.3
Q ss_pred ceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCc--------------------------ccchhHHhhcC
Q 024107 33 KLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADE--------------------------DLAKPFLTLFG 84 (272)
Q Consensus 33 ~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~--------------------------~~~~~l~~~~~ 84 (272)
+++|.||++| ++|....|.+.++++++.++ +.|+.|+++.. +....+++.||
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYD 127 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhC
Confidence 5999999999 99999999999999999864 99999998421 00157999999
Q ss_pred CCCCCceEEEEEeCCcceeec---------CCCCCChHHHHHHHHHHhcCc
Q 024107 85 LEESKNTVVTAFDNKAISKFL---------LESDLTPSNIEEFCSRLLHGT 126 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~~~~~---------~~g~~~~~~i~~fi~~~~~~~ 126 (272)
+.+. |++ .+++.++...+. +.|..+.+.|.+.+.+.+.++
T Consensus 128 v~~~-P~~-~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 128 AACT-PDF-YIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp CCEE-SEE-EEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred CCCC-CeE-EEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCC
Confidence 9999 999 788765555554 457789999999999998764
No 307
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.78 E-value=5.3e-08 Score=72.73 Aligned_cols=94 Identities=12% Similarity=0.127 Sum_probs=73.5
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc--------------------cchhHHhhcCCCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED--------------------LAKPFLTLFGLEE 87 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~--------------------~~~~l~~~~~i~~ 87 (272)
.+++++|.||++| ++|....+.+.++++++.+ .+.|+.|+++..+ ....+++.||+.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 5679999999999 9999999999999999987 5889988888631 0134899999999
Q ss_pred CCceEEEEEeCCcceeecCCCCC--ChHHHHHHHHHHhcC
Q 024107 88 SKNTVVTAFDNKAISKFLLESDL--TPSNIEEFCSRLLHG 125 (272)
Q Consensus 88 ~~P~i~~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~~ 125 (272)
+ |++ .+++.++...+.+.|.. +.+.+.+++.++...
T Consensus 107 ~-P~~-~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 107 V-PET-FVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp B-CEE-EEECTTSBEEEEEESCCCTTSHHHHHHHHTC---
T ss_pred C-CeE-EEECCCCcEEEEEcCCCccccHHHHHHHHHHHHH
Confidence 9 988 67765555555556654 778999999987653
No 308
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.77 E-value=5.2e-08 Score=72.91 Aligned_cols=82 Identities=5% Similarity=0.022 Sum_probs=68.2
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcccchh-----------------------HHhhcC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDLAKP-----------------------FLTLFG 84 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~~~~-----------------------l~~~~~ 84 (272)
.+++++|.||++| ++|....|.+.++++++.++ +.|+.|+++.. .+ +++.||
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD---EHFWKTSADNLPWVCVRDANGAYSSYISLYN 110 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC---HHHHHHHHTTCSSEEEECSSGGGCHHHHHHT
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC---HHHHHHHHhCCCceEEECCCCcchHHHHHcC
Confidence 4578999999999 99999999999999999875 99999999866 32 889999
Q ss_pred CCCCCceEEEEEeCCcceeecCCCCCChHHHH
Q 024107 85 LEESKNTVVTAFDNKAISKFLLESDLTPSNIE 116 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~ 116 (272)
+.+. |++ .+++.++...+.+.|..+.++..
T Consensus 111 v~~~-P~~-~lid~~G~i~~~~~g~~~~e~~~ 140 (152)
T 2lrt_A 111 VTNL-PSV-FLVNRNNELSARGENIKDLDEAI 140 (152)
T ss_dssp CCSC-SEE-EEEETTTEEEEETTTCSCHHHHH
T ss_pred cccC-ceE-EEECCCCeEEEecCCHHHHHHHH
Confidence 9999 999 88876665666677776655443
No 309
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.76 E-value=4.3e-08 Score=74.51 Aligned_cols=90 Identities=12% Similarity=0.181 Sum_probs=68.2
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CC----C-CC--------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EH----P-KL-------------- 210 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------~--~~----~-~~-------------- 210 (272)
.+++++|.||++||++|+...+.+.++..++++. ++.++.|+++. . .+ . ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 4789999999999999999999999999999864 49999998752 0 00 0 11
Q ss_pred ---------------cc--cCCC---eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 211 ---------------QV--EEYP---TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 211 ---------------~v--~~~P---~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++ .++| +.+++..++.+ ..++.|..+.+.|.++|++.+.
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV-VDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE-EEEECTTSCGGGGHHHHHHHTT
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCE-EEeeCCCCCHHHHHHHHHHHhh
Confidence 23 5678 77777444433 2268888889999999998875
No 310
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.76 E-value=1.3e-08 Score=76.09 Aligned_cols=90 Identities=9% Similarity=0.021 Sum_probs=61.2
Q ss_pred cccCCcceEEEEEEcc-cchHHHHHHHHHHH---HHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcce
Q 024107 27 VHSSPIKLQVYVFAKA-DDLKSLLEPLEDIA---RNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAIS 102 (272)
Q Consensus 27 ~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a---~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~ 102 (272)
...++++++|.||++| ++|+.+.|.+.+.. +... ..|+.|+.+... .++...+++.++ ||+ .+++.++..
T Consensus 40 A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~--~~~~~~~~v~~~-PT~-~f~~~~G~~ 113 (151)
T 3ph9_A 40 AQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHET--TDKNLSPDGQYV-PRI-MFVDPSLTV 113 (151)
T ss_dssp HHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCC--SCGGGCTTCCCS-SEE-EEECTTSCB
T ss_pred HHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCc--hhhHhhcCCCCC-CEE-EEECCCCCE
Confidence 3456789999999999 99999999998643 2222 234555554221 467889999999 999 888854444
Q ss_pred eecCCCC-------CChHHHHHHHHHH
Q 024107 103 KFLLESD-------LTPSNIEEFCSRL 122 (272)
Q Consensus 103 ~~~~~g~-------~~~~~i~~fi~~~ 122 (272)
..+..|. ...+.+.+++..+
T Consensus 114 v~~~~G~~~~~~~~~~~~~~~~ll~~~ 140 (151)
T 3ph9_A 114 RADIAGRYSNRLYTYEPRDLPLLIENM 140 (151)
T ss_dssp CTTCCCSCTTSTTCCCGGGHHHHHHHH
T ss_pred EEEEeCCcCCcccccchhhHHHHHHHH
Confidence 5555665 4455555555544
No 311
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.76 E-value=4.1e-08 Score=74.11 Aligned_cols=92 Identities=12% Similarity=0.145 Sum_probs=70.8
Q ss_pred CCCcEEEEEECCCChh-HHHhHHHHHHHHHHhcCC---CceEEEEEeCCCC-C---------------------------
Q 024107 159 SHKDVLLEVYTPWCVT-CETTSKQIEKLAKHFKGL---DNLVIAKIDASAN-E--------------------------- 206 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~-c~~~~~~~~~~a~~~~~~---~~v~~~~id~~~~-~--------------------------- 206 (272)
.+++++|+||++||++ |....+.+.++..+++.. .++.+..|+++.. +
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3789999999999997 999999999999998641 2688888888653 1
Q ss_pred -C-CCCcccCCC---------------eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 207 -H-PKLQVEEYP---------------TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 207 -~-~~~~v~~~P---------------~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
+ ..|++...| +++++..++.+ ..++.|..+.+.|.+.|++.+..
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~ll~~ 162 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF-LDYFGQNKRKGEIAASIATHMRP 162 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCE-EEEEETTCCHHHHHHHHHHHHGG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeE-EEEeCCCCCHHHHHHHHHHHHHh
Confidence 2 256777788 67777544443 23678889999999999987753
No 312
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.76 E-value=2.5e-08 Score=76.18 Aligned_cols=89 Identities=20% Similarity=0.183 Sum_probs=66.9
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC--------C-CC---C------------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA--------N-EH---P------------------ 208 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~--------~-~~---~------------------ 208 (272)
.+++++|.||++||+.|+ ..+.+.++..++++. ++.+..|+++. . .+ .
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE-GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG-TEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 478999999999999999 999999999999864 48888887530 0 00 0
Q ss_pred -------------CCcccCCC------eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 209 -------------KLQVEEYP------TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 209 -------------~~~v~~~P------~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
.+++.++| +.+++..++.+ ..++.|..+.+.|.+.|++.+.
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV-YERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE-EEEECTTSCGGGGHHHHHHHHT
T ss_pred ccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE-EEEeCCCCCHHHHHHHHHHHHH
Confidence 24577889 77777444433 2367888899999999998875
No 313
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.76 E-value=4.4e-08 Score=76.03 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=67.6
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC--------C-CC----C-CC--------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA--------N-EH----P-KL-------------- 210 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~--------~-~~----~-~~-------------- 210 (272)
.+++++|.||++||++|....|.+.++.+++++. .+.+..|+++. . .+ . .+
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 123 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCC
Confidence 4789999999999999999999999999999874 48888887652 0 11 0 10
Q ss_pred ------------------cccCCC---eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 211 ------------------QVEEYP---TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 211 ------------------~v~~~P---~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
++..+| +.+++..++.+ ..++.|..+.+.|.+.|++.+..
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i-~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 124 ENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP-VERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp C-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE-EEEECTTCCHHHHHHHHHHHC--
T ss_pred cchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE-EEEECCCCCHHHHHHHHHHHHhc
Confidence 233566 88888544444 23688889999999999998763
No 314
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.76 E-value=4.6e-08 Score=73.23 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=73.4
Q ss_pred cCCcceEEEEEEcc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcc-ee
Q 024107 29 SSPIKLQVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAI-SK 103 (272)
Q Consensus 29 ~~~~~~~v~fy~~~-~~c~~~~~~~---~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~-~~ 103 (272)
..+++++|.||++| ..|+.+.... .++++.++..+.++.+|.+..++ ..++++|++.++ |++ .+++...+ ..
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~-~~l~~~y~v~~~-P~~-~fld~~~G~~l 116 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEG-QRYIQFYKLGDF-PYV-SILDPRTGQKL 116 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHH-HHHHHHHTCCSS-SEE-EEECTTTCCCC
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhH-HHHHHHcCCCCC-CEE-EEEeCCCCcEe
Confidence 44789999999999 9999987655 66777776679999999976433 689999999999 999 78876522 22
Q ss_pred ecCCCCCChHHHHHHHHHHhcC
Q 024107 104 FLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 104 ~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
..+.| .+++.+.+++.+++..
T Consensus 117 ~~~~g-~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 117 VEWHQ-LDVSSFLDQVTGFLGE 137 (153)
T ss_dssp EEESS-CCHHHHHHHHHHHHHH
T ss_pred eecCC-CCHHHHHHHHHHHHHh
Confidence 33455 8999999999998753
No 315
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.75 E-value=7.9e-08 Score=77.68 Aligned_cols=173 Identities=10% Similarity=0.088 Sum_probs=89.8
Q ss_pred CCcceEEEEE-Ecc-cchH-HHHHHHHHHHHHhcC-ce-EEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcc--e
Q 024107 30 SPIKLQVYVF-AKA-DDLK-SLLEPLEDIARNFKG-KI-MFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAI--S 102 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~-~~~~~~~~~a~~~~~-~i-~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~--~ 102 (272)
++++++|.|| +.| ++|. .-.|.|.++++++.+ .+ .+..|+.+.......+++++++..+ |.+ .+.+.. .
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~-~~l---~D~~~~~~~ 107 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENI-SFI---PDGNGEFTE 107 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTS-EEE---ECTTSHHHH
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCce-EEE---ECCCcHHHH
Confidence 4568888999 999 9999 899999999999874 37 7888887643222455666666545 533 222211 1
Q ss_pred eecCCCCCChHHH------HHHHHHHhcCccccccccCCCCCCCCCCeEEecccchhHHhhcC--CCcEEEEEECCCChh
Q 024107 103 KFLLESDLTPSNI------EEFCSRLLHGTLTPYLKSQPIPDNTNANVQIVVGKTFDDLVLNS--HKDVLLEVYTPWCVT 174 (272)
Q Consensus 103 ~~~~~g~~~~~~i------~~fi~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~v~~~--~~~~lv~f~~~~C~~ 174 (272)
.|..........+ ..|+- -+|++....... .+... +...-+.+.+.+.+... ....++.|+.+||++
T Consensus 108 ~~gv~~~~~~~g~~~~~~p~t~li--~~G~i~~~~~~~-~~~~~--~~~~~~~~~il~~l~~~~i~~~~i~ly~~~~Cp~ 182 (241)
T 1nm3_A 108 GMGMLVGKEDLGFGKRSWRYSMLV--KNGVVEKMFIEP-NEPGD--PFKVSDADTMLKYLAPQHQVQESISIFTKPGCPF 182 (241)
T ss_dssp HTTCEEECTTTTCCEEECCEEEEE--ETTEEEEEEECC-SCSSC--CCSSSSHHHHHHHHCTTSCCCCCEEEEECSSCHH
T ss_pred HhCceeecccccCcccceeEEEEE--ECCEEEEEEEec-cCCCc--cceecCHHHHHHHhhhhccccceEEEEECCCChH
Confidence 1100000000000 00111 122221111110 00000 00000111111111111 244577889999999
Q ss_pred HHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C---CC-CCcccCCCeEE
Q 024107 175 CETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E---HP-KLQVEEYPTLL 219 (272)
Q Consensus 175 c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~---~~-~~~v~~~P~l~ 219 (272)
|+.++..+.+. .+.+-.+|++.+ . +. .++..++|+++
T Consensus 183 C~~a~~~L~~~--------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~ 224 (241)
T 1nm3_A 183 CAKAKQLLHDK--------GLSFEEIILGHDATIVSVRAVSGRTTVPQVF 224 (241)
T ss_dssp HHHHHHHHHHH--------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEE
T ss_pred HHHHHHHHHHc--------CCceEEEECCCchHHHHHHHHhCCCCcCEEE
Confidence 99998888764 355556777665 2 22 45778899985
No 316
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=9.2e-10 Score=83.07 Aligned_cols=88 Identities=17% Similarity=0.258 Sum_probs=63.8
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHH-HHHHhcCCCceEEEEEeCCCC-C-CCCCc------------------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEK-LAKHFKGLDNLVIAKIDASAN-E-HPKLQ------------------------ 211 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~-~a~~~~~~~~v~~~~id~~~~-~-~~~~~------------------------ 211 (272)
.+++++|+||++||++|+.+.+.+.+ +...++...++.++.|+++.. + ..++.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 36799999999999999999999998 888887222688888888765 3 22332
Q ss_pred ccCCCeEEEE-eCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 212 VEEYPTLLFY-PAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 212 v~~~P~l~~~-~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
+.++|+++++ ++|+... ++.| .+.+.+.++|++..
T Consensus 112 ~~~~P~~~lid~~G~i~~--~~~g-~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVK--LTRL-YNEEEFASLVQQIN 147 (159)
Confidence 5679999999 5555433 4555 45566777766543
No 317
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.75 E-value=5.9e-08 Score=75.20 Aligned_cols=95 Identities=19% Similarity=0.315 Sum_probs=75.1
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------------ccchhHHhh
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------------DLAKPFLTL 82 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~--------------------------~~~~~l~~~ 82 (272)
.+++++|.||++| ++|....+.+.++++++.+++.|+.|+++.. +....+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 4578999999999 9999999999999999997799999988421 001579999
Q ss_pred cCCCCCCceEEEEEeCCcceeec--------CCCCCChHHHHHHHHHHhcCc
Q 024107 83 FGLEESKNTVVTAFDNKAISKFL--------LESDLTPSNIEEFCSRLLHGT 126 (272)
Q Consensus 83 ~~i~~~~P~i~~~~~~~~~~~~~--------~~g~~~~~~i~~fi~~~~~~~ 126 (272)
||+.+. |++ .+++.++...+. +.|..+.+.|.+.+.+.+.++
T Consensus 112 ~~v~~~-P~~-~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 112 YRALRT-PEV-FLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp TTCCEE-SEE-EEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred cCCCCC-CeE-EEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 999999 999 788765544443 123347889999999998764
No 318
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.75 E-value=7.7e-08 Score=74.82 Aligned_cols=90 Identities=14% Similarity=0.130 Sum_probs=69.0
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CC----------------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EH---------------------- 207 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------~--~~---------------------- 207 (272)
.+++++|.||++||+.|+...+.+.++.+++++. .+.++.|+++. . .+
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 4689999999999999999999999999999863 48899898762 0 00
Q ss_pred --C----------CCcccCCC------eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 208 --P----------KLQVEEYP------TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 208 --~----------~~~v~~~P------~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
. .+++.++| +.+++..++.+ ..++.|..+.+.|.+.|++.+.
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP-VERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE-EEEECTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE-EEEECCCCCHHHHHHHHHHHHh
Confidence 0 13667788 77777444433 2268888899999999998875
No 319
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.75 E-value=4e-08 Score=74.80 Aligned_cols=91 Identities=10% Similarity=0.151 Sum_probs=69.6
Q ss_pred CCcEEEEEECCCChh-HHHhHHHHHHHHHHhcC---CCceEEEEEeCCCC-C----------------------------
Q 024107 160 HKDVLLEVYTPWCVT-CETTSKQIEKLAKHFKG---LDNLVIAKIDASAN-E---------------------------- 206 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~-c~~~~~~~~~~a~~~~~---~~~v~~~~id~~~~-~---------------------------- 206 (272)
+++++|+||++||++ |....+.+.++..+++. ..++.++.|+++.. +
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 689999999999998 99999999999999952 12689999988742 1
Q ss_pred C-CCCcccCCC---------------eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 207 H-PKLQVEEYP---------------TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 207 ~-~~~~v~~~P---------------~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
+ ..|++...| +++++..++.+ ..++.|..+.+.|.+.|++.+..
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF-TDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCE-EEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeE-EEEECCCCCHHHHHHHHHHHHHH
Confidence 1 145666666 77777544444 23688889999999999988753
No 320
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.75 E-value=1.9e-08 Score=76.69 Aligned_cols=88 Identities=14% Similarity=0.179 Sum_probs=68.3
Q ss_pred CCCcEEEEEECCCChh-HHHhHHHHHHHHHHhcCC--CceEEEEEeCCCC-CC---------------------------
Q 024107 159 SHKDVLLEVYTPWCVT-CETTSKQIEKLAKHFKGL--DNLVIAKIDASAN-EH--------------------------- 207 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~-c~~~~~~~~~~a~~~~~~--~~v~~~~id~~~~-~~--------------------------- 207 (272)
.+++++|+||++||++ |+...+.+.++..+++.. .++.+..|+++.. +.
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4789999999999996 999999999999998742 1599999998753 11
Q ss_pred -----------------CCCcccCCCeEEEEeCCCCcCceEeeCCC--CHHHHHHHHHHH
Q 024107 208 -----------------PKLQVEEYPTLLFYPAGDKANPIKVSARS--SSKNIAAFIKEQ 248 (272)
Q Consensus 208 -----------------~~~~v~~~P~l~~~~~~~~~~~~~~~g~~--~~~~l~~~i~~~ 248 (272)
..+++.++|+++++. ++.+ ..++.|.. +.+.|.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i-~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRL-VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEE-EEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEE-EEEECCCCCCCHHHHHHHHHHh
Confidence 012356889999999 5544 33677777 899999998864
No 321
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.74 E-value=3e-08 Score=69.36 Aligned_cols=76 Identities=9% Similarity=0.080 Sum_probs=64.7
Q ss_pred ceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCC
Q 024107 33 KLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLT 111 (272)
Q Consensus 33 ~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~ 111 (272)
+.++.|+++| ++|+.+.+.+++++..+. +.|..+|.++. +++..+||+. . |++ +++.+++. . +.|..+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d---~~l~~~ygv~-V-P~l-~~~~dG~~-v--~~g~~~ 98 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGN---EHLTRLYNDR-V-PVL-FAVNEDKE-L--CHYFLD 98 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTC---HHHHHHSTTS-C-SEE-EETTTTEE-E--ECSSCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCC---HHHHHHhCCC-C-ceE-EEEECCEE-E--EecCCC
Confidence 5689999999 999999999999999874 89999999988 8999999997 8 999 77765532 2 257788
Q ss_pred hHHHHHHH
Q 024107 112 PSNIEEFC 119 (272)
Q Consensus 112 ~~~i~~fi 119 (272)
.+.|.+|+
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 89998886
No 322
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.72 E-value=4.2e-08 Score=72.26 Aligned_cols=86 Identities=6% Similarity=0.164 Sum_probs=68.1
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHH---HHHHhcC-ceEEEEEeCCCcccchhH------------------------H
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLED---IARNFKG-KIMFTAVDIADEDLAKPF------------------------L 80 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~---~a~~~~~-~i~~~~vd~~~~~~~~~l------------------------~ 80 (272)
.+++++|.||++| ++|....|.+.+ +++.+.+ .+.|+.|+.+.. .+. .
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 102 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDEN---REEWATKAVYMPQGWIVGWNKAGDIRTR 102 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSC---HHHHHHHHTTSCTTCEEEECTTCHHHHT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCC---HHHHHHHHHHcCCCcceeeCCccchhhH
Confidence 4679999999999 999999999988 8888875 399999988855 333 3
Q ss_pred hhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 81 TLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 81 ~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
+.||+.++ |++ .+++.++...+ +..+.+.+.+++.+..
T Consensus 103 ~~~~v~~~-P~~-~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 103 QLYDIRAT-PTI-YLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp TCSCCCSS-SEE-EEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred HHcCCCCC-CeE-EEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 48999999 999 78876544444 5688999999998753
No 323
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.72 E-value=1.3e-08 Score=70.72 Aligned_cols=78 Identities=12% Similarity=0.250 Sum_probs=60.3
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC--CC-CC-CCCcccCCCeEEEEeCCCCcCceEeeCC
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS--AN-EH-PKLQVEEYPTLLFYPAGDKANPIKVSAR 235 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~--~~-~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~ 235 (272)
+.+.+++|+++||++|+.+.+.+.+++ . ++.+..+|++ .+ ++ .+++ .++|++ +.+|+.. ..+.
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~----~--~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~----~~~g 81 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK----D--RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL----MMHR 81 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS----S--SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE----EESS
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh----h--CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE----EecC
Confidence 557899999999999999999887653 2 4889999998 45 44 3789 999986 4566532 3566
Q ss_pred CCHHHHHHHHHHHcC
Q 024107 236 SSSKNIAAFIKEQLK 250 (272)
Q Consensus 236 ~~~~~l~~~i~~~~~ 250 (272)
.+.+.|.++|.+.+.
T Consensus 82 ~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 82 VNTSKLEKQLRKLSG 96 (100)
T ss_dssp CCHHHHHHHHHSSSC
T ss_pred CCHHHHHHHHHHHHh
Confidence 889999999987654
No 324
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.71 E-value=8.7e-08 Score=73.56 Aligned_cols=90 Identities=13% Similarity=0.138 Sum_probs=73.0
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc--------------------ccchhHHhhcCCCCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE--------------------DLAKPFLTLFGLEES 88 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~--------------------~~~~~l~~~~~i~~~ 88 (272)
.+++++|.||++| ++|....|.+.+++++ + +.|+.|++++. +....+++.||+.++
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~-v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--G-VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T-CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--C-CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 4678999999999 9999999999999988 3 77887775221 001578999999999
Q ss_pred CceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 89 KNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 89 ~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
|++ .+++.++...+.+.|..+.+.+.+++.+.+.
T Consensus 134 -P~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 134 -PET-YLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp -CEE-EEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred -CeE-EEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 988 7777666666777889999999999998875
No 325
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.71 E-value=2.6e-08 Score=75.60 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=67.4
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC---------CC-----CC---------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN---------EH-----PK--------------- 209 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~---------~~-----~~--------------- 209 (272)
.+++++|.||++||++|+...+.+.++..++++. .+.+..|+++.. .+ .+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK-GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC-CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 4789999999999999999999999999999863 489999987520 00 00
Q ss_pred ------C--------c-----ccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 210 ------L--------Q-----VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 210 ------~--------~-----v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
+ + +..+|+.+++..++.+ ..++.|..+.+.|.+.|++.+.
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQP-VKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCE-EEEECTTSCGGGGHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCE-EEEcCCCCCHHHHHHHHHHHhc
Confidence 0 2 3345888888554444 2368888888999999988764
No 326
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.69 E-value=1.6e-07 Score=72.62 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=74.1
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhc-CceEEEEEeCCCc--ccchhHHhhcCCC-------------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK-GKIMFTAVDIADE--DLAKPFLTLFGLE------------------- 86 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~-~~i~~~~vd~~~~--~~~~~l~~~~~i~------------------- 86 (272)
.+++++|.||++| ++|....+.+.++++++. ..+.|+.|+++.. .....+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 4678999999999 999999999999999998 4588998888753 1224677888875
Q ss_pred ----CCCceEEEEEeCCcceeecCCCCC--ChHHHHHHHHHHhcC
Q 024107 87 ----ESKNTVVTAFDNKAISKFLLESDL--TPSNIEEFCSRLLHG 125 (272)
Q Consensus 87 ----~~~P~i~~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~~ 125 (272)
++ |++ .+++.++...+.+.|.. +.+.+.++++..+.+
T Consensus 139 ~~~~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 139 GRALGM-PTS-VLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp TCCSSS-SEE-EEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred cccCCC-CEE-EEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 67 999 78876655555566665 478999999998764
No 327
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.68 E-value=1.1e-07 Score=71.80 Aligned_cols=87 Identities=7% Similarity=0.040 Sum_probs=64.5
Q ss_pred CCc-EEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC---------------------C-CC-CCCcccC
Q 024107 160 HKD-VLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------------------N-EH-PKLQVEE 214 (272)
Q Consensus 160 ~~~-~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~---------------------~-~~-~~~~v~~ 214 (272)
++. ++|+|| ++||++|....+.+.++..+++.. ++.++.|+.+. . .+ ..|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY-DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT-CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 555 999999 999999999999999999999864 48999988862 2 23 2578888
Q ss_pred ----CCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHH
Q 024107 215 ----YPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQ 248 (272)
Q Consensus 215 ----~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~ 248 (272)
+|+++++..++.+ ..++.|. ...+.+++.|++.
T Consensus 107 ~~~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 107 FILPARITFVIDKKGII-RHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp SSSCCCEEEEECTTSBE-EEEEECSSCTTHHHHHHHHHHHHH
T ss_pred cCcccceEEEECCCCEE-EEEEecCCCCCcCHHHHHHHHHHh
Confidence 9999999655544 2257773 2245566666543
No 328
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.13 E-value=2.2e-09 Score=79.25 Aligned_cols=67 Identities=13% Similarity=0.263 Sum_probs=53.0
Q ss_pred CC-cEEEEEECCCChhHHHhHHHHHHHHHHhcCC-CceEEEEEeCCCC--------------------------CC-CCC
Q 024107 160 HK-DVLLEVYTPWCVTCETTSKQIEKLAKHFKGL-DNLVIAKIDASAN--------------------------EH-PKL 210 (272)
Q Consensus 160 ~~-~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~-~~v~~~~id~~~~--------------------------~~-~~~ 210 (272)
++ +++|+||++||++|+.+.|.+.+++++++.. .++.++.|+++.. .+ ..+
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 55 9999999999999999999999999998432 1577777776643 23 256
Q ss_pred cccCCCeEEEEe-CCCC
Q 024107 211 QVEEYPTLLFYP-AGDK 226 (272)
Q Consensus 211 ~v~~~P~l~~~~-~~~~ 226 (272)
++.++|+++++. +|+.
T Consensus 105 ~v~~~P~~~lid~~G~i 121 (143)
T 2lus_A 105 GITGIPALVIVKKDGTL 121 (143)
Confidence 899999999997 5543
No 329
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.67 E-value=9.1e-08 Score=81.51 Aligned_cols=93 Identities=10% Similarity=0.032 Sum_probs=77.5
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc------------------------ccchhHHhhc
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE------------------------DLAKPFLTLF 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~------------------------~~~~~l~~~~ 83 (272)
.+++++|.||++| ++|+...|.+.++++++.+ .+.|+.|+++.. +....+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 4678999999999 9999999999999999986 499999987531 0014799999
Q ss_pred CCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 84 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 84 ~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+|.++ |++ .+++.++...+.+.|..+.+.+.+++.+.+.
T Consensus 161 gV~~~-Pt~-~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 161 RNRYW-PAE-YLIDATGTVRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TCCEE-SEE-EEECTTSBEEEEEESBCCHHHHHHHHHHHHH
T ss_pred CCCcc-CEE-EEEeCCCeEEEEEcCCCCHHHHHHHHHHHHh
Confidence 99999 999 7887665566667888999999999999875
No 330
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.67 E-value=1.6e-07 Score=69.36 Aligned_cols=73 Identities=10% Similarity=0.044 Sum_probs=59.5
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhc--CceEEEEEeCCCcc---------------------cchhHHhhcCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIADED---------------------LAKPFLTLFGL 85 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~--~~i~~~~vd~~~~~---------------------~~~~l~~~~~i 85 (272)
++++++|.||++| ++|+...|.+.++++++. +.+.|+.|+++... ....+++.||+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 5678999999999 999999999999999998 36999999888531 01579999999
Q ss_pred CCCCceEEEEEe-CCcceee
Q 024107 86 EESKNTVVTAFD-NKAISKF 104 (272)
Q Consensus 86 ~~~~P~i~~~~~-~~~~~~~ 104 (272)
.++ |++ .+++ .++...+
T Consensus 107 ~~~-P~~-~lid~~~G~i~~ 124 (144)
T 1i5g_A 107 KSI-PTL-VGVEADSGNIIT 124 (144)
T ss_dssp CSS-SEE-EEEETTTCCEEE
T ss_pred CCC-CEE-EEEECCCCcEEe
Confidence 999 999 7887 4433333
No 331
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.66 E-value=1.7e-08 Score=83.38 Aligned_cols=74 Identities=9% Similarity=-0.125 Sum_probs=58.6
Q ss_pred ceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc---c-cchhHHhhcCCCCCCceEEEEEeCCcceeecCC
Q 024107 33 KLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE---D-LAKPFLTLFGLEESKNTVVTAFDNKAISKFLLE 107 (272)
Q Consensus 33 ~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~---~-~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~ 107 (272)
..+|.||++| ++|+++.|.|+++|+++. .+||+.. + + +++|+++||+++ ||+ .+ ++ .+ +.
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~-~~la~~~gI~~v-PT~-~i--~G--~~--~~ 263 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQ-AQECTEAGITSY-PTW-II--NG--RT--YT 263 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCC-CHHHHTTTCCST-TEE-EE--TT--EE--EE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhH-HHHHHHcCCccc-CeE-EE--CC--EE--ec
Confidence 3579999999 999999999999997763 5666521 1 2 799999999999 998 55 33 34 48
Q ss_pred CCCChHHHHHHHHH
Q 024107 108 SDLTPSNIEEFCSR 121 (272)
Q Consensus 108 g~~~~~~i~~fi~~ 121 (272)
|.++.+++.+|+.-
T Consensus 264 G~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 264 GVRSLEALAVASGY 277 (291)
T ss_dssp SCCCHHHHHHHTCC
T ss_pred CCCCHHHHHHHHCC
Confidence 99999999998754
No 332
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.65 E-value=3.8e-08 Score=66.34 Aligned_cols=74 Identities=12% Similarity=0.156 Sum_probs=60.2
Q ss_pred EEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChH
Q 024107 35 QVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPS 113 (272)
Q Consensus 35 ~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~ 113 (272)
++.|+++| ++|+.+.|.+++++..+ +..||.++. +++.++||+. . |++ .+ .+++ .. .|..+.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~---~~l~~~~g~~-v-Ptl-~~-~~G~--~v--~g~~~~~ 66 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDD---AALESAYGLR-V-PVL-RD-PMGR--EL--DWPFDAP 66 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTC---HHHHHHHTTT-C-SEE-EC-TTCC--EE--ESCCCHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCC---HHHHHHhCCC-c-CeE-EE-ECCE--EE--eCCCCHH
Confidence 78999999 99999999999987654 688999988 8999999998 8 999 55 3332 22 2778999
Q ss_pred HHHHHHHHHhc
Q 024107 114 NIEEFCSRLLH 124 (272)
Q Consensus 114 ~i~~fi~~~~~ 124 (272)
.|.+++...+.
T Consensus 67 ~L~~~l~~~~~ 77 (87)
T 1ttz_A 67 RLRAWLDAAPH 77 (87)
T ss_dssp HHHHHHHTCC-
T ss_pred HHHHHHHHHHH
Confidence 99999987643
No 333
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.64 E-value=1.4e-07 Score=72.84 Aligned_cols=88 Identities=9% Similarity=0.024 Sum_probs=64.6
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC--------------------------------C
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN--------------------------------E 206 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~--------------------------------~ 206 (272)
.+++++|.||++||+.|....+.+.++..++++. .+.+..|+++.. .
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC-CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 4689999999999999999999999999999863 489999987520 0
Q ss_pred CCC--C----------c-----ccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 207 HPK--L----------Q-----VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 207 ~~~--~----------~-----v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
... + + +..+|+++++..++.+ ..++.|..+.+.|.++|++.
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV-VKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCE-EEEECTTSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCE-EEEeCCCCCHHHHHHHHHHh
Confidence 000 1 2 3335998888554444 23688888888888777654
No 334
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.64 E-value=1.9e-07 Score=73.70 Aligned_cols=44 Identities=18% Similarity=0.172 Sum_probs=39.3
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 203 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~ 203 (272)
.+++++|.||++||++|+...|.+.++.++++.. .+.+..|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~-g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR-GLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC-CeEEEEEECC
Confidence 3689999999999999999999999999999864 4899999875
No 335
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.63 E-value=2.4e-07 Score=68.54 Aligned_cols=66 Identities=14% Similarity=0.157 Sum_probs=56.7
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhc--CceEEEEEeCCCcc---------------------cchhHHhhcCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIADED---------------------LAKPFLTLFGL 85 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~--~~i~~~~vd~~~~~---------------------~~~~l~~~~~i 85 (272)
++++++|.||++| ++|+...|.+.++++++. +.+.|+.|+++... ....+++.|||
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 4678999999999 999999999999999998 36899999888531 01579999999
Q ss_pred CCCCceEEEEEe
Q 024107 86 EESKNTVVTAFD 97 (272)
Q Consensus 86 ~~~~P~i~~~~~ 97 (272)
.++ |++ .+++
T Consensus 107 ~~~-Pt~-~lid 116 (146)
T 1o8x_A 107 ESI-PTL-IGVD 116 (146)
T ss_dssp CSS-SEE-EEEE
T ss_pred CCC-CEE-EEEE
Confidence 999 999 7887
No 336
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.63 E-value=1.3e-07 Score=69.74 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=66.1
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHH---HHHHhcC-ceEEEEEeCCCcccc---------------------hhHHhhc
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLED---IARNFKG-KIMFTAVDIADEDLA---------------------KPFLTLF 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~---~a~~~~~-~i~~~~vd~~~~~~~---------------------~~l~~~~ 83 (272)
.+++++|.||++| ++|+...|.+.+ +++++.+ .+.|+.|+.+..... ..+.+.|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 3478999999999 999999999999 9999964 489999988765110 0147889
Q ss_pred CCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHH
Q 024107 84 GLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCS 120 (272)
Q Consensus 84 ~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~ 120 (272)
++.++ |++ .+++.++...+. ..+.+.|.+|++
T Consensus 110 ~v~~~-P~~-~lid~~G~i~~~---~~~~~~l~~~l~ 141 (142)
T 3eur_A 110 DLRAI-PTL-YLLDKNKTVLLK---DATLQKVEQYLA 141 (142)
T ss_dssp CCTTC-SEE-EEECTTCBEEEE---EECHHHHHHHHH
T ss_pred CCCcC-CeE-EEECCCCcEEec---CCCHHHHHHHHh
Confidence 99999 999 788766544443 235788888875
No 337
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.63 E-value=1.2e-07 Score=73.19 Aligned_cols=89 Identities=10% Similarity=0.084 Sum_probs=65.9
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CC------------C---------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EH------------P--------- 208 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------~--~~------------~--------- 208 (272)
.+++++|.||++||++|+...|.+.++++++++. .+.++.|+++. . .+ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH-HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC-CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 4689999999999999999999999999999863 49999998753 0 00 0
Q ss_pred -------CCcccCCC-------eEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 209 -------KLQVEEYP-------TLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 209 -------~~~v~~~P-------~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
.+.+..+| +.+++..++.+ ..++.|..+.+.|.+.|++.+
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKV-VGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCE-EEEECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCE-EEEeCCCCCHHHHHHHHHHHh
Confidence 01244578 66666444433 226888889999999998754
No 338
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.61 E-value=6.1e-09 Score=74.25 Aligned_cols=78 Identities=8% Similarity=0.276 Sum_probs=53.7
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC------CCC-CCcccCCCeEEEEeCCCCcCceEe
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------EHP-KLQVEEYPTLLFYPAGDKANPIKV 232 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~------~~~-~~~v~~~P~l~~~~~~~~~~~~~~ 232 (272)
++.+++ ||++||++|+.+.+.+.+++. .+.+..+|.+.. ++. .+++.++|++ |.+|+.+. .+
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~--~~ 87 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIG--GC 87 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEE--CH
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEEC--Ch
Confidence 345555 999999999999999888742 345666665543 233 6799999999 55665432 34
Q ss_pred eCCC---CHHHHHHHHHHH
Q 024107 233 SARS---SSKNIAAFIKEQ 248 (272)
Q Consensus 233 ~g~~---~~~~l~~~i~~~ 248 (272)
.|.. +.+.|.++|++.
T Consensus 88 ~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 88 DTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHhCChHHHHHHHc
Confidence 4443 566788888864
No 339
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.61 E-value=2e-07 Score=68.67 Aligned_cols=66 Identities=11% Similarity=0.156 Sum_probs=56.5
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhc--CceEEEEEeCCCcc---------------------cchhHHhhcCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFK--GKIMFTAVDIADED---------------------LAKPFLTLFGL 85 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~--~~i~~~~vd~~~~~---------------------~~~~l~~~~~i 85 (272)
++++++|.||++| ++|+...|.+.++++++. +.+.++.|+++... ....+++.|||
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 4678999999999 999999999999999998 46888888887631 01479999999
Q ss_pred CCCCceEEEEEe
Q 024107 86 EESKNTVVTAFD 97 (272)
Q Consensus 86 ~~~~P~i~~~~~ 97 (272)
.++ |++ .+++
T Consensus 107 ~~~-Pt~-~lid 116 (144)
T 1o73_A 107 ESI-PTL-ITIN 116 (144)
T ss_dssp CSS-SEE-EEEE
T ss_pred CCC-CEE-EEEE
Confidence 999 999 8888
No 340
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.59 E-value=3.5e-07 Score=72.71 Aligned_cols=95 Identities=16% Similarity=0.237 Sum_probs=75.2
Q ss_pred Cc-ceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCc--------------------------ccchhHHh
Q 024107 31 PI-KLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADE--------------------------DLAKPFLT 81 (272)
Q Consensus 31 ~~-~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~--------------------------~~~~~l~~ 81 (272)
++ .++|.||++| ++|....|.+.++++++.++ +.|+.|+++.. +....+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 45 4899999999 99999999999999999875 99999998421 00158999
Q ss_pred hcCCCCCCceEEEEEeCCcceeecC---------CCCCChHHHHHHHHHHhcCcc
Q 024107 82 LFGLEESKNTVVTAFDNKAISKFLL---------ESDLTPSNIEEFCSRLLHGTL 127 (272)
Q Consensus 82 ~~~i~~~~P~i~~~~~~~~~~~~~~---------~g~~~~~~i~~fi~~~~~~~~ 127 (272)
.||+.+. |++ .+++.++...|.. .+..+.+.|.+.++..+.++.
T Consensus 138 ~~~v~~~-P~~-~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 138 AYGAACT-PDF-FLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp HHTCCEE-SEE-EEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred HcCCCCC-CeE-EEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 9999999 999 7887665445431 234568999999999988753
No 341
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.59 E-value=6.5e-09 Score=69.03 Aligned_cols=59 Identities=19% Similarity=0.312 Sum_probs=43.7
Q ss_pred EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC-CC-CC-CCCcccCCCeEEEEeCCC
Q 024107 163 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS-AN-EH-PKLQVEEYPTLLFYPAGD 225 (272)
Q Consensus 163 ~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~-~~-~~-~~~~v~~~P~l~~~~~~~ 225 (272)
.+++|+++||++|+.+.+.+.+++.++.. .+.+..+|.+ .+ +. .++++.++|++++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY--TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE--EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC--eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 47889999999999999999988766543 4555555553 23 33 3779999999977 554
No 342
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.58 E-value=2.3e-08 Score=66.96 Aligned_cols=74 Identities=22% Similarity=0.337 Sum_probs=56.4
Q ss_pred EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----CCC-CCc--ccCCCeEEEEeCCCCcCceEeeC
Q 024107 163 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----EHP-KLQ--VEEYPTLLFYPAGDKANPIKVSA 234 (272)
Q Consensus 163 ~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----~~~-~~~--v~~~P~l~~~~~~~~~~~~~~~g 234 (272)
.++.|+++||++|+.+.+.+.+++..+. ++.+..+|++.+ ++. .++ +.++|++ |.+|+. ..|
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~-----i~~ 71 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQH-----IGG 71 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEE-----EES
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEE-----EEC
Confidence 3678999999999999999999998876 488888988654 232 466 8999998 345542 223
Q ss_pred CCCHHHHHHHHHHHc
Q 024107 235 RSSSKNIAAFIKEQL 249 (272)
Q Consensus 235 ~~~~~~l~~~i~~~~ 249 (272)
.+.|.+++++.+
T Consensus 72 ---~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 ---YTDFAAWVKENL 83 (85)
T ss_dssp ---SHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHhc
Confidence 378999988765
No 343
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.58 E-value=1.1e-07 Score=74.33 Aligned_cols=89 Identities=10% Similarity=0.134 Sum_probs=69.5
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC--------------------------CC-CCCc
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN--------------------------EH-PKLQ 211 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~--------------------------~~-~~~~ 211 (272)
+++++|+|| ++||+.|....+.+.++..+++.. ++.++.|+.+.. .+ ..|+
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR-DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 679999999 999999999999999999999864 588999888641 11 1357
Q ss_pred cc-----CCCeEEEEeCCCCcCceEeeCCC----CHHHHHHHHHHHcC
Q 024107 212 VE-----EYPTLLFYPAGDKANPIKVSARS----SSKNIAAFIKEQLK 250 (272)
Q Consensus 212 v~-----~~P~l~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~~~~ 250 (272)
+. .+|+++++..++.+ ..++.|.. +.+.|.+.|++...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEI-QFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBE-EEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CcccCCCccceEEEEcCCCeE-EEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 77 89999999655544 22455653 78999999998764
No 344
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.57 E-value=1.5e-07 Score=70.74 Aligned_cols=86 Identities=9% Similarity=0.088 Sum_probs=63.1
Q ss_pred CC-cEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-----------------------C-CC-CCCcc
Q 024107 160 HK-DVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------------N-EH-PKLQV 212 (272)
Q Consensus 160 ~~-~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-----------------------~-~~-~~~~v 212 (272)
++ +++|+|| ++||++|+...+.+.++..++++. ++.+..|+.+. + .+ ..|++
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND-DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS-SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 44 8999998 999999999999999999999754 58898888864 2 22 25677
Q ss_pred c----CCC--eEEEEeCCCCcCceEeeCCC----CHHHHHHHHHH
Q 024107 213 E----EYP--TLLFYPAGDKANPIKVSARS----SSKNIAAFIKE 247 (272)
Q Consensus 213 ~----~~P--~l~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~ 247 (272)
. ++| +++++..++.+ ..++.|.. ..+.+++.|++
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGII-RFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp EETTTTEECSEEEEECTTSBE-EEEEECCTTCCCCHHHHHHHHHH
T ss_pred ccccCCCeeeeEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHH
Confidence 7 888 77777544444 22566654 45667776664
No 345
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.57 E-value=9.3e-08 Score=74.08 Aligned_cols=89 Identities=10% Similarity=0.126 Sum_probs=68.8
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------------------------C-CC-CCCc
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------------------------N-EH-PKLQ 211 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------------------------~-~~-~~~~ 211 (272)
+++++|+|| ++||+.|....+.+.++..+++.. ++.++.|+.+. + .+ ..|+
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL-GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 689999999 999999999999999999999754 58888888864 1 11 1457
Q ss_pred cc------CCCeEEEEeCCCCcCceEeeCCC----CHHHHHHHHHHHcC
Q 024107 212 VE------EYPTLLFYPAGDKANPIKVSARS----SSKNIAAFIKEQLK 250 (272)
Q Consensus 212 v~------~~P~l~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~~~~ 250 (272)
+. ++|+++++..++.+ ..++.|.. +.+.|++.|++...
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVI-QAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBE-EEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 77 89999999554444 22566643 68889999987664
No 346
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.53 E-value=8.2e-08 Score=75.13 Aligned_cols=89 Identities=12% Similarity=0.187 Sum_probs=68.7
Q ss_pred CCCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-----------------C------------CC-
Q 024107 159 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-----------------N------------EH- 207 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-----------------~------------~~- 207 (272)
.+++++|+|| ++||++|+...+.+.++.++++.. ++.+..|+.+. . .+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK-GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 4689999999 999999999999999999999753 58888888764 1 11
Q ss_pred CCCccc-----CCCeEEEEeCCCCcCceEeeCCC----CHHHHHHHHHHHc
Q 024107 208 PKLQVE-----EYPTLLFYPAGDKANPIKVSARS----SSKNIAAFIKEQL 249 (272)
Q Consensus 208 ~~~~v~-----~~P~l~~~~~~~~~~~~~~~g~~----~~~~l~~~i~~~~ 249 (272)
..|++. ++|+++++..++.+ ..++.|.. +.+.|.+.|++..
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKV-RHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEE-EEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 145787 89999999655544 22565654 6789999998765
No 347
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.52 E-value=5.3e-07 Score=68.36 Aligned_cols=68 Identities=10% Similarity=0.136 Sum_probs=57.7
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC--ceEEEEEeCCCccc---------------------chhHHhhcCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG--KIMFTAVDIADEDL---------------------AKPFLTLFGL 85 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~--~i~~~~vd~~~~~~---------------------~~~l~~~~~i 85 (272)
++++++|.||++| ++|++..|.+.++++++.+ .+.|+.|+++.... ...+++.|||
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 4678999999999 9999999999999999985 58888888875411 0478999999
Q ss_pred CCCCceEEEEEeCC
Q 024107 86 EESKNTVVTAFDNK 99 (272)
Q Consensus 86 ~~~~P~i~~~~~~~ 99 (272)
.++ |++ .+++.+
T Consensus 127 ~~~-Pt~-~lid~~ 138 (165)
T 3s9f_A 127 ESI-PTL-IGLNAD 138 (165)
T ss_dssp CSS-SEE-EEEETT
T ss_pred CCC-CEE-EEEeCC
Confidence 999 999 888854
No 348
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.52 E-value=8.2e-07 Score=67.39 Aligned_cols=93 Identities=10% Similarity=0.072 Sum_probs=73.7
Q ss_pred CCcceEEEEEEcc-cc-hHHHHHHHHHHHHHhc-----CceEEEEEeCCCcc-------------------------cch
Q 024107 30 SPIKLQVYVFAKA-DD-LKSLLEPLEDIARNFK-----GKIMFTAVDIADED-------------------------LAK 77 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~-c~~~~~~~~~~a~~~~-----~~i~~~~vd~~~~~-------------------------~~~ 77 (272)
.+++++|.||+.| ++ |....|.+.++++++. ..+.|+.|+++... ...
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4578999999999 87 9999999999999995 35888888887310 002
Q ss_pred hHHhhcCCCCCCc---------------eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 78 PFLTLFGLEESKN---------------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 78 ~l~~~~~i~~~~P---------------~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
.+++.||+... | ++ .+++.++...+.+.|..+.+.+.+.+.+.+.
T Consensus 105 ~~~~~~~v~~~-p~~~~~~~~~~~~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 105 QASHSYRVYYN-AGPKDEDQDYIVDHSIAI-YLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHSCCCCE-ECCCCSSCCCCEECCCEE-EEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEE-ecCCCCCCCeEEeccceE-EEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 58889999877 7 77 6777665556667888999999999999875
No 349
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.52 E-value=5.4e-07 Score=67.85 Aligned_cols=93 Identities=10% Similarity=0.012 Sum_probs=73.7
Q ss_pred CCcceEEEEEEcc-cc-hHHHHHHHHHHHHHhcC-----ceEEEEEeCCCcc-------------------------cch
Q 024107 30 SPIKLQVYVFAKA-DD-LKSLLEPLEDIARNFKG-----KIMFTAVDIADED-------------------------LAK 77 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~-c~~~~~~~~~~a~~~~~-----~i~~~~vd~~~~~-------------------------~~~ 77 (272)
.+++++|.|++.| ++ |....|.+.++++++.+ .+.++.|+++... ...
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4678999999999 87 99999999999999863 6888888886421 012
Q ss_pred hHHhhcCCCCCCc---------------eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 78 PFLTLFGLEESKN---------------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 78 ~l~~~~~i~~~~P---------------~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
.+++.||+... | ++ .+++.++...+.+.|..+.+.+.+.+.+.+.
T Consensus 102 ~~~~~~~v~~~-p~~~~~~~~~~~~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYS-PGPKDEDEDYIVDHTIIM-YLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEE-EEEECTTSCEEEEECCEE-EEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEE-ecCCCCCCCeeEeccceE-EEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 48889999888 8 67 6777665566666888899999999998764
No 350
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.51 E-value=6e-07 Score=69.03 Aligned_cols=105 Identities=13% Similarity=0.081 Sum_probs=69.3
Q ss_pred CeEEecccchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC-------C--CCC----C
Q 024107 143 NVQIVVGKTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA-------N--EHP----K 209 (272)
Q Consensus 143 ~v~~l~~~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~-------~--~~~----~ 209 (272)
.+..++++.+.-.- -.+++++|+||++||++|+...|.+.++.+++++. .+.+..|+++. . .+. +
T Consensus 22 ~l~d~~G~~v~l~~-~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~~~d~~~~~~~~~~~ 99 (180)
T 3kij_A 22 EVKDAKGRTVSLEK-YKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS-HFSVLAFPCNQFGESEPRPSKEVESFARK 99 (180)
T ss_dssp EEEBTTSCEEEGGG-GTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT-SEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred EEecCCCCEecHHH-cCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC-CeEEEEEECCccccCCCCCHHHHHHHHHH
Confidence 34444554332211 14689999999999999999999999999999874 48999998653 0 000 1
Q ss_pred -Cc--------------------------ccCCCe----EEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 210 -LQ--------------------------VEEYPT----LLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 210 -~~--------------------------v~~~P~----l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++ ...+|+ .+++..++.+ ..++.|..+.+.|.+.|.+.+.
T Consensus 100 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 100 NYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQV-VKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp HHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCE-EEEECTTCCGGGTHHHHHHHHH
T ss_pred hcCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCE-EEEECCCCCHHHHHHHHHHHHH
Confidence 10 113676 6666444433 2268888888777777777654
No 351
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.47 E-value=8.6e-07 Score=67.49 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=68.6
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHH-------------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFL------------------- 80 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~--------~~~~~~l~------------------- 80 (272)
++++++|.||++| ++|. ..|.+.++++++.++ +.|+.|+++. .....+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 5678999999999 9999 999999999999865 8888887631 10001222
Q ss_pred -----------hhcCCCCCCc------eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 81 -----------TLFGLEESKN------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 81 -----------~~~~i~~~~P------~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+.+|+.+. | ++ .+++.++...+.+.|..+.+.+.+.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~-P~i~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGL-RGIKWNFEK-FLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSC-CSCCSTTCE-EEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred cchHHHHHHHhccCCcCCC-CcccccceE-EEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 24678888 9 77 6776665566667888899999999998864
No 352
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.47 E-value=8.5e-07 Score=68.53 Aligned_cols=88 Identities=8% Similarity=-0.042 Sum_probs=64.2
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC----C-C----CC----CC---------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA----N-E----HP----KL--------------- 210 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~----~-~----~~----~~--------------- 210 (272)
.+++++|.||++||+.|+...|.+.++..++++. .+.+..|+++. . + +. ++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC-CeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCCh
Confidence 4689999999999999999999999999999863 48999998752 0 0 00 00
Q ss_pred ----------------c-----ccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHH
Q 024107 211 ----------------Q-----VEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQ 248 (272)
Q Consensus 211 ----------------~-----v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~ 248 (272)
+ +..+|+.+++..++.+ ..++.|..+.+.|.+.|++.
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV-VKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCE-EEEECTTSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCE-EEeeCCCCCHHHHHHHHHHh
Confidence 1 1225888888554444 33688888888888887764
No 353
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.45 E-value=7.5e-07 Score=80.15 Aligned_cols=110 Identities=11% Similarity=-0.067 Sum_probs=83.9
Q ss_pred hhHHHHHhhc--CCCceEeeCcccccccccC-CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccch
Q 024107 2 DKILQFLNYN--KFPLVTKLTDINSASVHSS-PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAK 77 (272)
Q Consensus 2 ~~l~~fi~~~--s~~~v~~l~~~~f~~~~~~-~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~ 77 (272)
+|+.+||..- ....-..++++.++++... ....++.|+++| ++|+.+.|.+.+++..+. ++.+..+|.+.+ +
T Consensus 85 ~e~~s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~---~ 160 (521)
T 1hyu_A 85 HEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTF---Q 160 (521)
T ss_dssp GGHHHHHHHHHHHTTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTC---H
T ss_pred hhHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhh---H
Confidence 3556666551 2222356677777776533 345688899999 999999999999999987 699999999999 9
Q ss_pred hHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHH
Q 024107 78 PFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRL 122 (272)
Q Consensus 78 ~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 122 (272)
+++++|||.+. |++ .+ +++ ... .|..+.+.|.+++...
T Consensus 161 ~~~~~~~i~sv-Pt~-~i--~g~-~~~--~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 161 NEITERNVMGV-PAV-FV--NGK-EFG--QGRMTLTEIVAKVDTG 198 (521)
T ss_dssp HHHHHTTCCSS-SEE-EE--TTE-EEE--ESCCCHHHHHHHHCCS
T ss_pred HHHHHhCCCcc-CEE-EE--CCE-EEe--cCCCCHHHHHHHHhhc
Confidence 99999999999 999 55 332 222 4888999999997664
No 354
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.44 E-value=9.2e-07 Score=65.11 Aligned_cols=86 Identities=10% Similarity=0.171 Sum_probs=65.6
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc-----------------------chhHHhhcC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL-----------------------AKPFLTLFG 84 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~~-----------------------~~~l~~~~~ 84 (272)
++++++|.||++| ++|....|.+.++++++.+ .+.|+.|+.+.... ...+++.||
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 4578999999999 9999999999999999985 48888888874310 025789999
Q ss_pred CCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHH
Q 024107 85 LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCS 120 (272)
Q Consensus 85 i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~ 120 (272)
+.+. |+. .+++.++...+. ..+.+++.+++.
T Consensus 111 v~~~-P~~-~lid~~G~i~~~---~~~~~~l~~~l~ 141 (143)
T 4fo5_A 111 LRKG-FKN-FLINDEGVIIAA---NVTPEKLTEILK 141 (143)
T ss_dssp GGGC-CCE-EEECTTSBEEEE---SCCHHHHHHHHT
T ss_pred CCCC-CcE-EEECCCCEEEEc---cCCHHHHHHHHH
Confidence 9999 999 788755444443 245667776664
No 355
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.44 E-value=1.4e-06 Score=67.65 Aligned_cols=93 Identities=19% Similarity=0.197 Sum_probs=71.2
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHH-hh----------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFL-TL---------------- 82 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~--------~~~~~~l~-~~---------------- 82 (272)
.+++++|.||++| ++|....|.+.++++++.++ +.|+.|+++. .....+++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 5678999999999 99999999999999999865 9999998862 10012333 22
Q ss_pred -------------cCCCCCCc------eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 83 -------------FGLEESKN------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 83 -------------~~i~~~~P------~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+|+.+. | ++ .+++.++...+.+.|..+.+.+.+.+.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~-P~i~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKT-KAIKWNFTS-FLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGC-CSCCSTTCE-EEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCC-ccccccceE-EEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 366667 8 77 6776665566667888999999999999875
No 356
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.42 E-value=7.8e-07 Score=69.46 Aligned_cols=89 Identities=13% Similarity=0.129 Sum_probs=66.9
Q ss_pred CCCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-
Q 024107 159 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH- 207 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----------------------------~~- 207 (272)
.+++++|+|| ++||+.|....+.+.+++.+++.. ++.++.|+++.. ++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL-GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 3688999999 999999999999999999999764 589999988641 11
Q ss_pred CCCccc------CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHHc
Q 024107 208 PKLQVE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 249 (272)
Q Consensus 208 ~~~~v~------~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 249 (272)
..|++. .+|+++++..++.+ ..++.|. .+.+.+++.|+...
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVL-RQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcE-EEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 134666 79999999655544 2244453 46788998888754
No 357
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.41 E-value=1.3e-06 Score=66.17 Aligned_cols=93 Identities=14% Similarity=0.166 Sum_probs=70.2
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHHh-hc---------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFLT-LF--------------- 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~--------~~~~~~l~~-~~--------------- 83 (272)
++++++|.||++| ++|....|.+.++++++.++ +.|+.|+++. .....++++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 5678999999999 99999999999999999875 9999998852 101123344 33
Q ss_pred --------------CC--CCCCc---eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 84 --------------GL--EESKN---TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 84 --------------~i--~~~~P---~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
|+ .+. | ++ .+++.++...+.+.|..+.+.+.+.+.+.++
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~-p~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDI-QWNFAK-FLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCC-CSTTCE-EEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred chHHHHHHHHhcCCCccCCcc-cccccE-EEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 33 445 7 77 6777665566667888899999999998764
No 358
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.40 E-value=2.1e-06 Score=65.29 Aligned_cols=91 Identities=13% Similarity=0.172 Sum_probs=67.6
Q ss_pred CCCcEEEEEECCCCh-hHHHhHHHHHHHHHHhcCCC-ceEEEEEeCCCC-C----C----CC------------------
Q 024107 159 SHKDVLLEVYTPWCV-TCETTSKQIEKLAKHFKGLD-NLVIAKIDASAN-E----H----PK------------------ 209 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~-~c~~~~~~~~~~a~~~~~~~-~v~~~~id~~~~-~----~----~~------------------ 209 (272)
.+++++|.||++||+ .|....+.+.++...+.... ++.+..|+++.. + + .+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 378999999999999 99999999999999987642 488999887621 0 0 00
Q ss_pred -------------------CcccCCCeEEEEeCCCCcCceEeeCCC--CHHHHHHHHHHHcC
Q 024107 210 -------------------LQVEEYPTLLFYPAGDKANPIKVSARS--SSKNIAAFIKEQLK 250 (272)
Q Consensus 210 -------------------~~v~~~P~l~~~~~~~~~~~~~~~g~~--~~~~l~~~i~~~~~ 250 (272)
+++...|+++++..++.+ ..++.|.. +.+.|.+.|++.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i-~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV-LKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE-EEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE-EEEEcCCCCCCHHHHHHHHHHHHh
Confidence 134568988888655544 23577765 58999999998765
No 359
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.39 E-value=1.4e-06 Score=67.89 Aligned_cols=94 Identities=10% Similarity=0.091 Sum_probs=73.8
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc----------------------cchhHHhhcC
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED----------------------LAKPFLTLFG 84 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~----------------------~~~~l~~~~~ 84 (272)
.+++++|.|| +.| ++|....+.+.++++++.+ .+.|+.|+.+... ....+++.||
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 4578999999 999 9999999999999999986 4888888886410 0147889999
Q ss_pred CC-----CCCceEEEEEeCCcceeecCCCC----CChHHHHHHHHHHhcC
Q 024107 85 LE-----ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLLHG 125 (272)
Q Consensus 85 i~-----~~~P~i~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~~ 125 (272)
+. +. |++ .+++.++...+.+.|. .+.+.+.+.++....+
T Consensus 124 v~~~~g~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~ 171 (195)
T 2bmx_A 124 VLNADGVAD-RVT-FIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSD 171 (195)
T ss_dssp CBCTTSSBC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC-
T ss_pred CcccCCCcc-ceE-EEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhC
Confidence 99 88 999 7887655555555443 3789999999998764
No 360
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.36 E-value=3.5e-06 Score=63.66 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=69.6
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCc--------ccchhHH-hhc---------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADE--------DLAKPFL-TLF--------------- 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~--------~~~~~l~-~~~--------------- 83 (272)
.+++++|.||++| ++|....|.+.++++++.++ +.++.|+++.. ....+++ +++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4678999999999 99999999999999999864 99999988631 0012231 322
Q ss_pred --------------C-----CCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 84 --------------G-----LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 84 --------------~-----i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
| |... |++ .+++.++...+.+.|..+.+.+.+.+.+.+..
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 168 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWN-FSK-FLVDRQGQPVKRYSPTTAPYDIEGDIMELLEK 168 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCST-TCE-EEECTTSCEEEEECTTSCGGGGHHHHHHHHHC
T ss_pred cccHHHHHHHhhcCCccCCccccc-ceE-EEECCCCCEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 3 3334 788 67776655666678888899999999988753
No 361
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.35 E-value=2.5e-06 Score=64.18 Aligned_cols=91 Identities=13% Similarity=0.167 Sum_probs=67.1
Q ss_pred CCcc-eEEEEE-Ecc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcc------------------cchhHHhhcCCCC
Q 024107 30 SPIK-LQVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADED------------------LAKPFLTLFGLEE 87 (272)
Q Consensus 30 ~~~~-~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~------------------~~~~l~~~~~i~~ 87 (272)
.++. ++|.|| +.| ++|....|.+.++++++.++ +.|+.|+++... ....+++.||+.+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 3455 899999 999 99999999999999999865 888888887210 0158999999998
Q ss_pred ----CCceEEEEEeCCcceeecCCCC----CChHHHHHHHHHH
Q 024107 88 ----SKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRL 122 (272)
Q Consensus 88 ----~~P~i~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~ 122 (272)
. |++ .+++.++...+.+.|. ...+.+.+.+.+.
T Consensus 107 ~~~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 107 FILPA-RIT-FVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp SSSCC-CEE-EEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred cCccc-ceE-EEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 8 999 7887665555555663 2344455555443
No 362
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.34 E-value=1e-06 Score=66.86 Aligned_cols=90 Identities=12% Similarity=0.121 Sum_probs=69.1
Q ss_pred CCcceEEEEEEcc-cc-hHHHHHHHHHHHHHhcC----ceEEEEEeCCCcccc-------------------------hh
Q 024107 30 SPIKLQVYVFAKA-DD-LKSLLEPLEDIARNFKG----KIMFTAVDIADEDLA-------------------------KP 78 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~-c~~~~~~~~~~a~~~~~----~i~~~~vd~~~~~~~-------------------------~~ 78 (272)
.+++++|.||+.| ++ |....|.+.++++++.+ .+.|+.|+++..... ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4678999999999 87 99999999999999984 599999998742100 14
Q ss_pred HHhhcCC---------------CCCCceEEEEEeCCcceeecCCCCC--ChHHHHHHHHHH
Q 024107 79 FLTLFGL---------------EESKNTVVTAFDNKAISKFLLESDL--TPSNIEEFCSRL 122 (272)
Q Consensus 79 l~~~~~i---------------~~~~P~i~~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~ 122 (272)
+++.||+ .+. |++ .+++ ++...+.+.|.. +.+.|.+.+++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~-P~~-~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHT-ATT-FVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEEC-CCE-EEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecC-CEE-EEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 6666664 567 999 7888 655556667766 888888888764
No 363
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.33 E-value=9.7e-07 Score=69.21 Aligned_cols=88 Identities=14% Similarity=0.150 Sum_probs=66.6
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------C----------C-C
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------E----------H-P 208 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------------~----------~-~ 208 (272)
+++++|+|| ++||+.|....+.+.++..+++.. ++.++.|+.+.. . + .
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~-~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI-GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 679999999 999999999999999999999753 589999988641 1 1 1
Q ss_pred CCccc------CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHHc
Q 024107 209 KLQVE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 249 (272)
Q Consensus 209 ~~~v~------~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 249 (272)
.|++. .+|+++++..++.+ ..++.|. .+.+.|++.|+...
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNL-RQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEE-EEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 24677 89999999655554 2234443 45688988888765
No 364
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.65 E-value=7.5e-08 Score=72.40 Aligned_cols=89 Identities=9% Similarity=0.014 Sum_probs=64.4
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHH-HHHHhc--CceEEEEEeCCCcccchhHHhhc----------------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLED-IARNFK--GKIMFTAVDIADEDLAKPFLTLF---------------------- 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~-~a~~~~--~~i~~~~vd~~~~~~~~~l~~~~---------------------- 83 (272)
.+++++|.||++| ++|+...|.+.+ ++..+. ..+.|+.|+++.. ++.+++|
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 108 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP---LEKVLAFAKSTGVTYPLGLDPGADIFAKY 108 (159)
Confidence 4678999999999 999999999998 888887 3588889988765 3333333
Q ss_pred C--CCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 84 G--LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 84 ~--i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
| +.+. |++ .+++.++...+.+.| .+.+.+.+++.++..
T Consensus 109 ~~~~~~~-P~~-~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 109 ALRDAGI-TRN-VLIDREGKIVKLTRL-YNEEEFASLVQQINE 148 (159)
Confidence 3 4567 998 777655444444444 566677777777654
No 365
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.30 E-value=2.7e-06 Score=65.82 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=68.6
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHHh-h----------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFLT-L---------------- 82 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~--------~~~~~~l~~-~---------------- 82 (272)
++++++|.||++| ++|....|.+.++++++.++ +.++.|+++. .+...++++ +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4678999999999 99999999999999999875 8888887752 100011111 1
Q ss_pred ----------------cCCCCCCc---eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 83 ----------------FGLEESKN---TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 83 ----------------~~i~~~~P---~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+|+... | ++ .+++.++...+.+.|..+.+.|.+.+.+.+++
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~i-P~~~~~-~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAI-KWNFTS-FLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSC-CSTTCE-EEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred chhHHHHHHHhhcCCccCCCcc-ccceeE-EEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 233344 6 88 67776665666678889999999999998764
No 366
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.30 E-value=1e-06 Score=67.28 Aligned_cols=82 Identities=12% Similarity=0.170 Sum_probs=62.6
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC---------------------------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN--------------------------------- 205 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~--------------------------------- 205 (272)
+.+.+++.|+++||++|+.+.+.+.++.+++. ++.+...+..-.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~---~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~ 97 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP---NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGK 97 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCC---CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Confidence 35678999999999999999999999988865 466666554311
Q ss_pred -------------------------------------CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHH
Q 024107 206 -------------------------------------EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE 247 (272)
Q Consensus 206 -------------------------------------~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 247 (272)
.. .+++|.++|++++ +|+ .+.|..+.+.|.++|.+
T Consensus 98 ~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~-----~~~G~~~~~~l~~~i~~ 170 (175)
T 3gyk_A 98 ANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA-----LVPGFVEQSQLQDAVDR 170 (175)
T ss_dssp CSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE-----EECSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE-----EeeCCCCHHHHHHHHHH
Confidence 01 1348999999987 442 57899999999999987
Q ss_pred HcC
Q 024107 248 QLK 250 (272)
Q Consensus 248 ~~~ 250 (272)
.+.
T Consensus 171 ~l~ 173 (175)
T 3gyk_A 171 ARK 173 (175)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 367
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.30 E-value=3.7e-07 Score=60.39 Aligned_cols=69 Identities=13% Similarity=0.153 Sum_probs=50.1
Q ss_pred EEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC----CCcccCCCeEEEEeCCCCcCceEeeCCCCH
Q 024107 164 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP----KLQVEEYPTLLFYPAGDKANPIKVSARSSS 238 (272)
Q Consensus 164 lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~----~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~ 238 (272)
++.|+++||++|+.+.+.+.+. ++.+..+|++.+ +.. ++++.++|++ +.+|+ ..++.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~------~~~g~~~ 66 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDL------SWSGFRP 66 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTE------EEESCCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCE------EEecCCH
Confidence 6789999999999999888763 467778898876 332 4789999998 33553 2344567
Q ss_pred HHHHHHHHHH
Q 024107 239 KNIAAFIKEQ 248 (272)
Q Consensus 239 ~~l~~~i~~~ 248 (272)
+.|.++|.+.
T Consensus 67 ~~l~~~l~~~ 76 (81)
T 1h75_A 67 DMINRLHPAP 76 (81)
T ss_dssp HHHGGGSCCC
T ss_pred HHHHHHHhcc
Confidence 7777766544
No 368
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.29 E-value=1.8e-06 Score=66.70 Aligned_cols=93 Identities=11% Similarity=0.008 Sum_probs=73.1
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCc----------------------ccchhHHhhcC
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADE----------------------DLAKPFLTLFG 84 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~----------------------~~~~~l~~~~~ 84 (272)
.+++++|.|| ++| ++|....+.+.++++++.+ .+.|+.|+++.. +....+++.||
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 4578999999 999 9999999999999999985 488888888641 00157899999
Q ss_pred CC------CCCceEEEEEeCCcceeecCCCC----CChHHHHHHHHHHhc
Q 024107 85 LE------ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLLH 124 (272)
Q Consensus 85 i~------~~~P~i~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~ 124 (272)
+. +. |++ .+++.++...+.+.|. .+.+.+.+.++....
T Consensus 110 v~~~~~g~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 110 VLNEETGLAD-RGT-FIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp CEETTTTEEC-EEE-EEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCcCCCCcee-eEE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 98 88 999 7887665555555443 378899999998764
No 369
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.28 E-value=1.3e-06 Score=67.93 Aligned_cols=89 Identities=16% Similarity=0.195 Sum_probs=66.7
Q ss_pred CCCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-
Q 024107 159 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH- 207 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----------------------------~~- 207 (272)
.+++++|+|| ++||+.|....+.+.++..+++.. ++.++.|+.+.. .+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER-NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH
Confidence 4679999999 999999999999999999999643 588888887631 11
Q ss_pred CCCccc-----CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHHc
Q 024107 208 PKLQVE-----EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 249 (272)
Q Consensus 208 ~~~~v~-----~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 249 (272)
..|++. .+|+++++..++.+ ..++.|. .+.+.+++.|+...
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVV-QHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBE-EEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEE-EEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 135777 89999999655544 2244453 35788888888654
No 370
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.28 E-value=6.8e-06 Score=65.12 Aligned_cols=80 Identities=16% Similarity=0.269 Sum_probs=58.2
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC----------------------------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------------------------------- 204 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~---------------------------------- 204 (272)
+++.+++.|+++||++|+.+.+.+.++++. ++.+..+....
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~ 159 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL-----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVA 159 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCC
Confidence 467899999999999999999999988752 35554443210
Q ss_pred -----CC------C-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHc
Q 024107 205 -----NE------H-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQL 249 (272)
Q Consensus 205 -----~~------~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~ 249 (272)
.. + .+++|+++|++ ++.+|. .+.|..+.+.|.++|.+..
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~-----~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 160 PASCDVDIADHYALGVQLGVSGTPAV-VLSNGT-----LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC-----EEESCCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCccCEE-EEcCCe-----EecCCCCHHHHHHHHHHhh
Confidence 01 1 13489999999 455552 5789899999999998764
No 371
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.28 E-value=1.9e-06 Score=68.23 Aligned_cols=89 Identities=15% Similarity=0.187 Sum_probs=66.3
Q ss_pred CCCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------C----------C-
Q 024107 159 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------E----------H- 207 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------------~----------~- 207 (272)
.+++++|+|| ++||+.|....+.+.+++++++.. ++.++.|+.+.. . +
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER-NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH
Confidence 4678999999 999999999999999999999643 588888887641 0 1
Q ss_pred CCCccc-----CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHHc
Q 024107 208 PKLQVE-----EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 249 (272)
Q Consensus 208 ~~~~v~-----~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 249 (272)
..|++. .+|+++++..++.+ ..++.|. .+.+.|++.|+...
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i-~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIV-QHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBE-EEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 134677 79999999655554 2234443 35788998888754
No 372
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.28 E-value=1.8e-06 Score=68.65 Aligned_cols=88 Identities=14% Similarity=0.156 Sum_probs=66.7
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------------CC-C
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------------EH-P 208 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----------------------------~~-~ 208 (272)
+++++|+|| ++||+.|....+.+.++..+++.. ++.++.|+++.. .+ .
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV-NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 589999999 999999999999999999999643 588888887641 11 1
Q ss_pred CCccc------CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHHc
Q 024107 209 KLQVE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 249 (272)
Q Consensus 209 ~~~v~------~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 249 (272)
.|++. .+|+++++..++.+ ..++.|. .+.+.+++.|+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I-~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVI-KHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE-EEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHhh
Confidence 35777 89999999655544 2234443 46788998888765
No 373
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.26 E-value=1.3e-06 Score=68.14 Aligned_cols=92 Identities=11% Similarity=0.154 Sum_probs=71.9
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcc-------------------------cchhHHh
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADED-------------------------LAKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~-------------------------~~~~l~~ 81 (272)
.+++++|.|| +.| ++|....|.+.++++++.+. +.|+.|+.+... ....+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 4678999999 999 99999999999999999753 888888876410 0147899
Q ss_pred hcCCC-----CCCceEEEEEeCCcceeecCCCC----CChHHHHHHHHHHh
Q 024107 82 LFGLE-----ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLL 123 (272)
Q Consensus 82 ~~~i~-----~~~P~i~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~ 123 (272)
.||+. +. |++ .+++.++...+.+.|. .+.+.+.+.+....
T Consensus 112 ~~~v~~~~g~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIAL-RGA-FLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEEC-EEE-EEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCccc-ceE-EEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 88 999 7887665555555444 37889999998875
No 374
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.26 E-value=9.1e-07 Score=61.20 Aligned_cols=77 Identities=10% Similarity=0.169 Sum_probs=60.4
Q ss_pred cceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC--CcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCC
Q 024107 32 IKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA--DEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLES 108 (272)
Q Consensus 32 ~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~--~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g 108 (272)
.+.+++|+++| ++|+.+.+.+.+++.. +.|..+|.+ .. +++.+++| .+. |++ . .++. .. ..+
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~~---~el~~~~g-~~v-P~l-~-~~g~-~~---~~~ 80 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLPEN---STWYERYK-FDI-PVF-H-LNGQ-FL---MMH 80 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSSTT---HHHHHHSS-SSC-SEE-E-ESSS-EE---EES
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCcch---HHHHHHHC-CCC-CEE-E-ECCE-EE---Eec
Confidence 46788999999 9999999999877532 899999998 54 79999999 988 988 3 3332 22 135
Q ss_pred CCChHHHHHHHHHHh
Q 024107 109 DLTPSNIEEFCSRLL 123 (272)
Q Consensus 109 ~~~~~~i~~fi~~~~ 123 (272)
..+.+.|.+++.+.+
T Consensus 81 g~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 81 RVNTSKLEKQLRKLS 95 (100)
T ss_dssp SCCHHHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHH
Confidence 588999999998764
No 375
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.57 E-value=1.2e-07 Score=69.73 Aligned_cols=68 Identities=10% Similarity=0.101 Sum_probs=54.6
Q ss_pred CCc-ceEEEEEEcc-cchHHHHHHHHHHHHHhc---CceEEEEEeCCCccc----------------------chhHHhh
Q 024107 30 SPI-KLQVYVFAKA-DDLKSLLEPLEDIARNFK---GKIMFTAVDIADEDL----------------------AKPFLTL 82 (272)
Q Consensus 30 ~~~-~~~v~fy~~~-~~c~~~~~~~~~~a~~~~---~~i~~~~vd~~~~~~----------------------~~~l~~~ 82 (272)
.++ +++|.||++| ++|+...|.+.++++++. ..+.++.|+++.... ...+++.
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 345 8999999999 999999999999999993 358888888774410 0268999
Q ss_pred cCCCCCCceEEEEEeCC
Q 024107 83 FGLEESKNTVVTAFDNK 99 (272)
Q Consensus 83 ~~i~~~~P~i~~~~~~~ 99 (272)
||+.++ |++ .+++.+
T Consensus 104 ~~v~~~-P~~-~lid~~ 118 (143)
T 2lus_A 104 YGITGI-PAL-VIVKKD 118 (143)
Confidence 999999 999 777744
No 376
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.25 E-value=5.2e-06 Score=62.77 Aligned_cols=87 Identities=11% Similarity=0.150 Sum_probs=63.0
Q ss_pred CCCcEEEEEECCC-ChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC------------------------CCCcc
Q 024107 159 SHKDVLLEVYTPW-CVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH------------------------PKLQV 212 (272)
Q Consensus 159 ~~~~~lv~f~~~~-C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~------------------------~~~~v 212 (272)
.+++++|.||++| |++|+...+.+.++.+++ . ++.++.|+.+.. .. ..|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC
Confidence 3679999999999 999999999999999999 4 688888887642 11 02344
Q ss_pred cC------CCeEEEEeCCCCcCceEeeCC-----CCHHHHHHHHHHHc
Q 024107 213 EE------YPTLLFYPAGDKANPIKVSAR-----SSSKNIAAFIKEQL 249 (272)
Q Consensus 213 ~~------~P~l~~~~~~~~~~~~~~~g~-----~~~~~l~~~i~~~~ 249 (272)
.. .|+.+++..++.+ ..++.|. .+.+.+++.|++.+
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i-~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKV-VYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCE-EEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcE-EEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 44 4999999655544 2245432 34588888888754
No 377
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.24 E-value=2.7e-06 Score=65.38 Aligned_cols=92 Identities=9% Similarity=0.021 Sum_probs=66.8
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHHhh-cC--------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFLTL-FG-------------- 84 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~--------~~~~~~l~~~-~~-------------- 84 (272)
++++++|.||++| ++|....|.+.++++++.++ +.|+.|+++. .....+++++ ++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4678999999999 99999999999999999875 9999998863 1011234444 33
Q ss_pred ---------CCCCCc-------eEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 85 ---------LEESKN-------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 85 ---------i~~~~P-------~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
+.+. | +. .+++.++...+.+.|..+.+.+.+.+.+.+
T Consensus 128 ~~~~~~~~~~~~~-P~~~~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 128 GAHPAFKYLAQTS-GKEPTWNFWK-YLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TSCHHHHHHHHHH-SCCCCSTTCE-EEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cchhhhhhhhhcC-CCccccceeE-EEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 3334 7 66 566655555566678888888888887653
No 378
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.23 E-value=9e-07 Score=58.45 Aligned_cols=57 Identities=5% Similarity=-0.027 Sum_probs=46.5
Q ss_pred eEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-CcccchhHHhhcCCCCCCceEEEE
Q 024107 34 LQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA-DEDLAKPFLTLFGLEESKNTVVTA 95 (272)
Q Consensus 34 ~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~-~~~~~~~l~~~~~i~~~~P~i~~~ 95 (272)
.+++|+++| ++|+.+.+.+.++++.+...+.+..+|.+ .. .++++++|+.+. |++ .+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~gv~~v-Pt~-~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKAR---IAEAEKAGVKSV-PAL-VI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSST---HHHHHHHTCCEE-EEE-EE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhh---HHHHHHcCCCcC-CEE-EE
Confidence 477899999 99999999999998877545666666654 34 689999999999 999 55
No 379
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.22 E-value=5e-06 Score=62.29 Aligned_cols=88 Identities=11% Similarity=0.083 Sum_probs=65.5
Q ss_pred Cc-ceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc---------------------cchhHHhhcCC
Q 024107 31 PI-KLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED---------------------LAKPFLTLFGL 85 (272)
Q Consensus 31 ~~-~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~---------------------~~~~l~~~~~i 85 (272)
++ +++|.|| +.| ++|....+.+.++++++.+ .+.|+.|+++... + ..+++.||+
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~v 113 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPH-GAVSQAYGV 113 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTT-THHHHHTTC
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcC-hHHHHHcCC
Confidence 44 8999998 999 9999999999999999975 4888888886410 1 579999999
Q ss_pred C----CCCc--eEEEEEeCCcceeecCCCCC----ChHHHHHHHHH
Q 024107 86 E----ESKN--TVVTAFDNKAISKFLLESDL----TPSNIEEFCSR 121 (272)
Q Consensus 86 ~----~~~P--~i~~~~~~~~~~~~~~~g~~----~~~~i~~fi~~ 121 (272)
. +. | ++ .+++.++...+.+.|.. ..+.+.+.+.+
T Consensus 114 ~~~~~~~-p~~~~-~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 114 FNEQAGI-ANRGT-FVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp EETTTTE-ECSEE-EEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ccccCCC-eeeeE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 8 87 8 77 56765555555555543 45566665554
No 380
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.20 E-value=5.6e-06 Score=59.52 Aligned_cols=94 Identities=7% Similarity=0.180 Sum_probs=73.7
Q ss_pred eEEecc-cchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCCC-CCCcccCCCeEEEE
Q 024107 144 VQIVVG-KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANEH-PKLQVEEYPTLLFY 221 (272)
Q Consensus 144 v~~l~~-~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~~-~~~~v~~~P~l~~~ 221 (272)
+..|++ +.+.+++ ..+..++|-|+++||+.| .+.+.++|+.+ . .+.|+..+.. ++ .+++++ .|++++|
T Consensus 23 ~~~i~s~~e~e~fi-~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~--d~~F~~t~~~--~v~~~~~v~-~~~vvlf 92 (124)
T 2l4c_A 23 PTWLTDVPAAMEFI-AATEVAVIGFFQDLEIPA---VPILHSMVQKF-P--GVSFGISTDS--EVLTHYNIT-GNTICLF 92 (124)
T ss_dssp CEECCSHHHHHHHH-HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T--TSEEEEECCH--HHHHHTTCC-SSCEEEE
T ss_pred ceEcCCHHHHHHHH-hcCCCEEEEEECCCCChh---HHHHHHHHHhC-C--CceEEEEChH--HHHHHcCCC-CCeEEEE
Confidence 455644 6788877 557788999999999998 66899999999 5 7899887542 33 367777 7999999
Q ss_pred eCCCCcCceEeeC----CCCHHHHHHHHHHH
Q 024107 222 PAGDKANPIKVSA----RSSSKNIAAFIKEQ 248 (272)
Q Consensus 222 ~~~~~~~~~~~~g----~~~~~~l~~~i~~~ 248 (272)
+..... ++.|.| ..+.+.|.+||..+
T Consensus 93 kkfde~-~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 93 RLVDNE-QLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp ETTTTE-EEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EcCCCC-ceeecCcccCCCCHHHHHHHHHHh
Confidence 987644 557886 68999999999976
No 381
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.18 E-value=4.6e-06 Score=53.96 Aligned_cols=66 Identities=21% Similarity=0.341 Sum_probs=49.0
Q ss_pred EEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-C---CCcccCCCeEEEEeCCCCcCceEeeCCCCH
Q 024107 164 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-P---KLQVEEYPTLLFYPAGDKANPIKVSARSSS 238 (272)
Q Consensus 164 lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~---~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~ 238 (272)
++.|+++||++|+.+.+.+.+. ++.+..+|++.+ +. . .+++.++|++++ +|. ..++.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~------~~~g~~~ 66 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGE------HWSGFRP 66 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTE------EEESCCH
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCe------EEcCCCH
Confidence 6789999999999999888764 366777888876 33 2 578899999973 442 2334577
Q ss_pred HHHHHHH
Q 024107 239 KNIAAFI 245 (272)
Q Consensus 239 ~~l~~~i 245 (272)
+.|.+++
T Consensus 67 ~~l~~~l 73 (75)
T 1r7h_A 67 ERIKQLQ 73 (75)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887776
No 382
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.17 E-value=6.1e-06 Score=65.68 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=64.5
Q ss_pred CCCcEEEEEEC-CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------C----------C-
Q 024107 159 SHKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------E----------H- 207 (272)
Q Consensus 159 ~~~~~lv~f~~-~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------------~----------~- 207 (272)
.+++++|.||+ .||+.|....+.+.++.++++.. ++.++.|+++.. . +
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR-NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 36899999996 99999999999999999999864 588988888741 1 1
Q ss_pred CCCccc------CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHH
Q 024107 208 PKLQVE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKE 247 (272)
Q Consensus 208 ~~~~v~------~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~ 247 (272)
..|++. .+|+++++...+.+ ...+.|. ...+.+++.|+.
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I-~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGIL-RQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEE-EEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHH
Confidence 124666 78999999665554 2244443 346777777765
No 383
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.17 E-value=2.1e-06 Score=67.89 Aligned_cols=78 Identities=14% Similarity=0.273 Sum_probs=56.6
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC----------------------------------
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA---------------------------------- 204 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~---------------------------------- 204 (272)
+.+.+++.|+++||++|+.+.+.+.++.+. ++.+..+...-
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~-----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~ 159 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL-----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPK 159 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCC
Confidence 467889999999999999999999887652 24444332220
Q ss_pred -----C------CC-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHH
Q 024107 205 -----N------EH-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKE 247 (272)
Q Consensus 205 -----~------~~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 247 (272)
. .+ .+++|+++|++++ .+|+ ++.|..+.+.|.++|.+
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~-----~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 160 EVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE-----LIGGYLKPADLLRALEE 208 (211)
T ss_dssp SCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC-----CCCSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE-----EecCCCCHHHHHHHHHh
Confidence 0 01 1358999999987 5664 36788899999999875
No 384
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.17 E-value=1.2e-05 Score=61.73 Aligned_cols=93 Identities=10% Similarity=0.036 Sum_probs=67.5
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHHhh-cCCC------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFLTL-FGLE------------ 86 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~--------~~~~~~l~~~-~~i~------------ 86 (272)
++++++|.|+++| ++|....|.+.++++++.++ +.++.|+++. .+...+++++ +|+.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 5679999999999 99999999999999999875 8899888653 1111356666 5543
Q ss_pred --------------CCCce----EEEEEeCCcceeecCCCCCChHHHHHHHHHHhc
Q 024107 87 --------------ESKNT----VVTAFDNKAISKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 87 --------------~~~P~----i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
+. |+ . .+++.++...+.+.|..+.+.+.+.+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~-p~~~~~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKE-PRWNFWK-YLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp TCCHHHHHHHHHHTCC-CSSTTCE-EEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred cccHHHHHHHhcCCCC-ccccceE-EEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 13 54 5 4666555556666788888777777777654
No 385
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.16 E-value=1.2e-05 Score=63.38 Aligned_cols=42 Identities=7% Similarity=0.056 Sum_probs=38.0
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIA 71 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~ 71 (272)
++++++|.||++| ++|.+..|.+.++++++.++ +.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4578999999999 99999999999999999865 899999885
No 386
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.14 E-value=9.2e-06 Score=58.37 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=72.6
Q ss_pred e-CcccccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEE
Q 024107 19 L-TDINSASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAF 96 (272)
Q Consensus 19 l-~~~~f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~ 96 (272)
+ +.+.+++++.....++|-||.+| ++| .+.|.++|+.+ +.+.|+..+. .++.+++++. . |++ .+|
T Consensus 26 i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~~------~~v~~~~~v~-~-~~v-vlf 92 (124)
T 2l4c_A 26 LTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGISTD------SEVLTHYNIT-G-NTI-CLF 92 (124)
T ss_dssp CCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEECC------HHHHHHTTCC-S-SCE-EEE
T ss_pred cCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEECh------HHHHHHcCCC-C-CeE-EEE
Confidence 5 45668888887888999999999 887 57899999999 6799988643 4799999998 5 999 788
Q ss_pred eCCcceeecCCC----CCChHHHHHHHHHH
Q 024107 97 DNKAISKFLLES----DLTPSNIEEFCSRL 122 (272)
Q Consensus 97 ~~~~~~~~~~~g----~~~~~~i~~fi~~~ 122 (272)
......+..|.| ..+.+.|.+||...
T Consensus 93 kkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 93 RLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp ETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 765444444565 78999999999863
No 387
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.13 E-value=6.3e-06 Score=64.46 Aligned_cols=92 Identities=12% Similarity=0.035 Sum_probs=61.6
Q ss_pred CCCcEEEEEECCCChh-HHHhHHHHHHHHHHhcCC--CceEEEEEeCCCC-C----------------------------
Q 024107 159 SHKDVLLEVYTPWCVT-CETTSKQIEKLAKHFKGL--DNLVIAKIDASAN-E---------------------------- 206 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~-c~~~~~~~~~~a~~~~~~--~~v~~~~id~~~~-~---------------------------- 206 (272)
.+++++|+||++||++ |....+.+.++...+... .++.+..|+++.. +
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4789999999999997 999999999988777521 1688888887631 0
Q ss_pred C-CCCccc-CC---------------CeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcCc
Q 024107 207 H-PKLQVE-EY---------------PTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLKE 251 (272)
Q Consensus 207 ~-~~~~v~-~~---------------P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~~ 251 (272)
+ ..|++. .. |+++++..++.+ ...+.|..+.+.+.+.|.+.+..
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i-~~~~~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQF-VDALGRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCE-EEEECTTCCTTHHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcE-EEEeCCCCCHHHHHHHHHHHHHH
Confidence 0 123443 23 366777544444 22577777777777777776654
No 388
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.10 E-value=1.5e-05 Score=59.88 Aligned_cols=87 Identities=9% Similarity=0.066 Sum_probs=61.8
Q ss_pred CCcEEEEEEC-CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C---------------------C-CCCcccC-
Q 024107 160 HKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E---------------------H-PKLQVEE- 214 (272)
Q Consensus 160 ~~~~lv~f~~-~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~---------------------~-~~~~v~~- 214 (272)
+++++|+||+ +||+.|....+.+.++..+++.. .+.+..|..+.. . + ..|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA-GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 6689999998 99999999999999999999764 488888877631 1 1 1245554
Q ss_pred -----------CCeEEEEeCCCCcCceEeeCC---CCHHHHHHHHHHH
Q 024107 215 -----------YPTLLFYPAGDKANPIKVSAR---SSSKNIAAFIKEQ 248 (272)
Q Consensus 215 -----------~P~l~~~~~~~~~~~~~~~g~---~~~~~l~~~i~~~ 248 (272)
.|+.+++..++.+ ...+.+. ...+.+++.|++.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i-~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQV-VQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCE-EEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeE-EEEEcCCCcccCHHHHHHHHHHH
Confidence 8999999665554 2234443 2346677777654
No 389
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.09 E-value=1.2e-05 Score=61.88 Aligned_cols=90 Identities=14% Similarity=0.055 Sum_probs=63.8
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCC--------cccchhHHhhc----------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIAD--------EDLAKPFLTLF---------------- 83 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~--------~~~~~~l~~~~---------------- 83 (272)
.+++++|.||++| ++|....|.+.++++++.++ +.|+.|+++. .....++++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4678999999999 99999999999999999864 8999998752 00001222222
Q ss_pred ---------------C-----CCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHH
Q 024107 84 ---------------G-----LEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSR 121 (272)
Q Consensus 84 ---------------~-----i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 121 (272)
| +... |++ .+++.++...+.+.|..+.+.|.+.+.+
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~-P~~-~lid~~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWN-FTK-FLIDKNGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCST-TCE-EEECTTSCEEEEECTTSCTHHHHTTSGG
T ss_pred hhHHHHHhhccCCCCCccccccccc-ceE-EEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 3 2334 888 6777665556666787888777766654
No 390
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.09 E-value=1.3e-05 Score=62.40 Aligned_cols=92 Identities=7% Similarity=0.092 Sum_probs=71.1
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc-------------------------cchhHHh
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED-------------------------LAKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~-------------------------~~~~l~~ 81 (272)
.+++++|.|| +.| ++|....+.+.++++++.+ .+.|+.|+++... ....+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 4578999999 999 9999999999999999975 4889888887420 0146889
Q ss_pred hcCCC------CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHh
Q 024107 82 LFGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 123 (272)
Q Consensus 82 ~~~i~------~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 123 (272)
.||+. .+ |++ .+++.++...+.+.| .++.+++.+.+....
T Consensus 113 ~~gv~~~~~~~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 113 DYGVLKTDEGIAY-RGL-FIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCcee-eEE-EEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 99998 67 999 777766544454434 357889999988875
No 391
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.07 E-value=1.6e-05 Score=61.19 Aligned_cols=42 Identities=12% Similarity=0.025 Sum_probs=37.9
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIA 71 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~ 71 (272)
++++++|.||++| ++|....|.+.++++++.++ +.++.|+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 4578999999999 99999999999999999865 999999876
No 392
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.07 E-value=5.6e-06 Score=66.78 Aligned_cols=85 Identities=12% Similarity=0.253 Sum_probs=60.7
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC----------------------------------
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN---------------------------------- 205 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~---------------------------------- 205 (272)
.+.+++.|+.+||++|+.+.+.+..+.+. + ++.+..+...-.
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g--~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--G--KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--T--SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--C--cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 45689999999999999999999887664 3 577776655210
Q ss_pred -------C----------C-CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 206 -------E----------H-PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 206 -------~----------~-~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
. + .+++|+++|++++...++.. .+..|..+.+.|.++|.+...
T Consensus 173 ~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~--~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 173 VPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL--QQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE--EEEESSCCHHHHHHHTTC---
T ss_pred ccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE--EEecCCCCHHHHHHHHHHHHH
Confidence 0 0 13489999999998643332 257899999999999887653
No 393
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.06 E-value=1.9e-05 Score=60.23 Aligned_cols=87 Identities=11% Similarity=0.139 Sum_probs=59.0
Q ss_pred CCCcEEEEEECCC-ChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----------------------CC-CCCccc
Q 024107 159 SHKDVLLEVYTPW-CVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----------------------EH-PKLQVE 213 (272)
Q Consensus 159 ~~~~~lv~f~~~~-C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----------------------~~-~~~~v~ 213 (272)
.+++++|.||++| |+.|+...+.+.++..+ . ++.++.|+.+.. .+ ..|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCc
Confidence 3679999999998 99999999999999988 3 688888887621 11 134666
Q ss_pred CC---------CeEEEEeCCCCcCceEeeC-C----CCHHHHHHHHHHHcC
Q 024107 214 EY---------PTLLFYPAGDKANPIKVSA-R----SSSKNIAAFIKEQLK 250 (272)
Q Consensus 214 ~~---------P~l~~~~~~~~~~~~~~~g-~----~~~~~l~~~i~~~~~ 250 (272)
.. |+.+++..++.+ ...+.| . ...+.+++.+.+..+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I-~~~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNV-AYTELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBE-EEEEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred ccccccCCcccceEEEECCCCeE-EEEEECCCcCCCCCHHHHHHHHHhhcC
Confidence 55 888888655554 224442 2 245566666655444
No 394
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.05 E-value=1.5e-05 Score=62.28 Aligned_cols=92 Identities=10% Similarity=0.064 Sum_probs=71.4
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc-------------------------cchhHHh
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED-------------------------LAKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~-------------------------~~~~l~~ 81 (272)
.+++++|.|| ++| ++|....+.+.++++++.+ .+.|+.|+++... ....+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 3578999999 999 9999999999999999975 4888888886410 0147889
Q ss_pred hcCCC------CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHh
Q 024107 82 LFGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 123 (272)
Q Consensus 82 ~~~i~------~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 123 (272)
.||+. +. |++ .+++.++...+.+.| ..+.+++.+.++.+.
T Consensus 115 ~ygv~~~~~g~~~-P~~-~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAY-RGL-FIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCcee-eEE-EEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 99999 88 999 788766555554433 356799999998876
No 395
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.01 E-value=7.7e-05 Score=58.93 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=37.4
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 203 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~ 203 (272)
.++.+||.||++||+.|+ ..|.++++.++|+.. .+.+..|.++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~-g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPY-GLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC-CeEEEEEEcc
Confidence 378999999999999999 788999999999864 5899988764
No 396
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.01 E-value=2e-05 Score=62.56 Aligned_cols=92 Identities=13% Similarity=0.118 Sum_probs=71.8
Q ss_pred CcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc-------------------------cchhHHhh
Q 024107 31 PIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED-------------------------LAKPFLTL 82 (272)
Q Consensus 31 ~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~-------------------------~~~~l~~~ 82 (272)
+++++|.|| +.| +.|....+.+.++++++.+ .+.|+.|+++... ....+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 478999999 999 9999999999999999964 4888888876310 01478999
Q ss_pred cCCC------CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHhc
Q 024107 83 FGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLLH 124 (272)
Q Consensus 83 ~~i~------~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~~ 124 (272)
||+. .. |++ .+++.++...+.+.| ..+.+++.+.++.+..
T Consensus 136 ygv~~~~~g~~~-P~~-~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 136 YGVLLEGPGLAL-RGL-FIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQF 185 (220)
T ss_dssp TTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred hCCeecCCCccc-ceE-EEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 9998 88 999 888766555554433 3677999999998764
No 397
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.01 E-value=6.9e-06 Score=54.55 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=58.2
Q ss_pred EEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc-cchhHHhhcC--CCCCCceEEEEEeCCcceeecCCCCC
Q 024107 35 QVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED-LAKPFLTLFG--LEESKNTVVTAFDNKAISKFLLESDL 110 (272)
Q Consensus 35 ~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~-~~~~l~~~~~--i~~~~P~i~~~~~~~~~~~~~~~g~~ 110 (272)
++.|+++| ++|+++.+.+.+++..+.+ +.|..+|.+... ...++.+.+| +.+. |++ .+ + + ... .|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~v-P~i-~~-~-g--~~i--~~-- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETV-PQI-FV-D-Q--QHI--GG-- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCS-CEE-EE-T-T--EEE--ES--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCcee-CeE-EE-C-C--EEE--EC--
Confidence 67889999 9999999999999998876 999999987541 1137999999 8899 999 43 3 2 222 22
Q ss_pred ChHHHHHHHHHHh
Q 024107 111 TPSNIEEFCSRLL 123 (272)
Q Consensus 111 ~~~~i~~fi~~~~ 123 (272)
.+.|.+++.+.+
T Consensus 72 -~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 -YTDFAAWVKENL 83 (85)
T ss_dssp -SHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhc
Confidence 367888887643
No 398
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.97 E-value=3.1e-05 Score=61.13 Aligned_cols=92 Identities=11% Similarity=0.135 Sum_probs=70.5
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc-------------------------cchhHHh
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED-------------------------LAKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~-------------------------~~~~l~~ 81 (272)
++++++|.|| ++| +.|....+.+.+++++|.+ .+.|+.|+++... ....+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 4578999999 999 9999999999999999963 4888888775410 0146889
Q ss_pred hcCCC-----CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHh
Q 024107 82 LFGLE-----ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 123 (272)
Q Consensus 82 ~~~i~-----~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 123 (272)
.||+. .. |++ .+++.++...+.+.| .++.+++.+.++...
T Consensus 131 ~ygv~~~~g~~~-p~~-~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSL-RAF-VLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEEC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcc-cEE-EEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99998 78 999 777766555554433 356889999988875
No 399
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.97 E-value=2.3e-05 Score=60.64 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=37.0
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDA 202 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~ 202 (272)
+.+.+++.|+++||++|+.+.+.+.++.+.+.+ ++.|..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEeh
Confidence 467889999999999999999999999999877 788877765
No 400
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.96 E-value=4.3e-05 Score=58.11 Aligned_cols=84 Identities=6% Similarity=0.032 Sum_probs=63.4
Q ss_pred CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCc------------------------------------
Q 024107 31 PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADE------------------------------------ 73 (272)
Q Consensus 31 ~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~------------------------------------ 73 (272)
.+..++.|++.| ++|+++.|.+.++.+++.+ +.|...+..-.
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~~ 100 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKANE 100 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCSH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCCH
Confidence 456788999999 9999999999999998766 66666553210
Q ss_pred ------------------------------ccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 74 ------------------------------DLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 74 ------------------------------~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
.....+++.+||.++ ||+ .+ + + ..+ .|..+.+.+.+.+.+.+
T Consensus 101 ~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gt-Pt~-~i-~-g--~~~--~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 101 TGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGT-PSF-VV-E-D--ALV--PGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSS-SEE-EE-T-T--EEE--CSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccC-CEE-EE-C-C--EEe--eCCCCHHHHHHHHHHHH
Confidence 001457789999999 999 44 3 2 333 78899999999998865
No 401
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.93 E-value=2.8e-05 Score=60.22 Aligned_cols=92 Identities=12% Similarity=0.170 Sum_probs=70.6
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc-------------------------cchhHHh
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED-------------------------LAKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~-------------------------~~~~l~~ 81 (272)
++++++|.|| +.| ++|....+.+.++++++.+ .+.|+.|+++... ....+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 4578999999 999 9999999999999999963 4888888876310 0146889
Q ss_pred hcCCC-----CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHh
Q 024107 82 LFGLE-----ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 123 (272)
Q Consensus 82 ~~~i~-----~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 123 (272)
.||+. .. |++ .+++.++...+.+.| ..+.+++.+.+....
T Consensus 110 ~~gv~~~~g~~~-P~~-~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVAL-RAF-VLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEEC-CEE-EEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCcee-eEE-EEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999 78 999 788766555554434 246788888888765
No 402
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.90 E-value=3.3e-05 Score=57.78 Aligned_cols=42 Identities=12% Similarity=0.141 Sum_probs=34.7
Q ss_pred CcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC
Q 024107 161 KDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA 204 (272)
Q Consensus 161 ~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~ 204 (272)
+.++|+|| +.||+.|....+.+.++.++++.. . .+..|..+.
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~-~vv~is~d~ 78 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-A-AVFGLSADS 78 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT-C-EEEEEESCC
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC-C-cEEEEeCCC
Confidence 46888887 899999999999999999999875 3 677776653
No 403
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.90 E-value=7.6e-05 Score=58.18 Aligned_cols=94 Identities=9% Similarity=-0.083 Sum_probs=67.2
Q ss_pred CCcceEEEEEEcc-cc-hHHHHHHHHHHHHHhc----CceEEEEEeCCCc-------------------------ccchh
Q 024107 30 SPIKLQVYVFAKA-DD-LKSLLEPLEDIARNFK----GKIMFTAVDIADE-------------------------DLAKP 78 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~-c~~~~~~~~~~a~~~~----~~i~~~~vd~~~~-------------------------~~~~~ 78 (272)
.+++++|.|++.| ++ |....|.+.++.+++. +.+.++.|+++.. +....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4678999999999 87 9999999999887775 3588888877621 00135
Q ss_pred HHhhcCCC-CCCc---------------eEEEEEeCCcceeecCCCCCChHHHHHHHHHHhcC
Q 024107 79 FLTLFGLE-ESKN---------------TVVTAFDNKAISKFLLESDLTPSNIEEFCSRLLHG 125 (272)
Q Consensus 79 l~~~~~i~-~~~P---------------~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 125 (272)
+++.||+. .. | ++ .+++.++...+.+.|..+.+.+.+.+.+.+..
T Consensus 120 ~~~~~gv~~~~-p~~~~~~~~~~~~~~~~~-~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 120 ACKKYRVYFST-PPNVKPGQDYLVDHSIFF-YLMDPEGQFVDALGRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp HHHHTTC---------------CTTTCCCE-EEECTTSCEEEEECTTCCTTHHHHHHHHHHHH
T ss_pred HHHHcCcEEee-ccccCCCCCceeeecceE-EEECCCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 78888887 33 3 66 66676655556667778888888888887753
No 404
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.89 E-value=9.4e-05 Score=55.69 Aligned_cols=91 Identities=11% Similarity=0.040 Sum_probs=67.0
Q ss_pred CCcceEEEEEEcc--cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc--------------------cchhHHhhcCCCC
Q 024107 30 SPIKLQVYVFAKA--DDLKSLLEPLEDIARNFKGKIMFTAVDIADED--------------------LAKPFLTLFGLEE 87 (272)
Q Consensus 30 ~~~~~~v~fy~~~--~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~--------------------~~~~l~~~~~i~~ 87 (272)
.+++++|.||+.| ++|....|.+.++++++ ..+.|+.|+.+... ....+.+.||+..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 4578999999998 89999999999999999 56888888876311 0146778888875
Q ss_pred ------CCceEEEEEeCCcceeecCCC-----CCChHHHHHHHHHHh
Q 024107 88 ------SKNTVVTAFDNKAISKFLLES-----DLTPSNIEEFCSRLL 123 (272)
Q Consensus 88 ------~~P~i~~~~~~~~~~~~~~~g-----~~~~~~i~~fi~~~~ 123 (272)
. |+. .+++.++...+.+.| ..+.+.+.+.+++.+
T Consensus 122 ~~~g~~~-p~~-~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 122 KELRLLA-RSV-FVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTTCSBC-CEE-EEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccCCcee-eEE-EEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 4 888 677766555554433 235678888887754
No 405
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.88 E-value=3.6e-06 Score=59.59 Aligned_cols=88 Identities=9% Similarity=0.024 Sum_probs=54.9
Q ss_pred ccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc--cchhHHhhcCCCCCCceEEEEEeCCc
Q 024107 24 SASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED--LAKPFLTLFGLEESKNTVVTAFDNKA 100 (272)
Q Consensus 24 f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~--~~~~l~~~~~i~~~~P~i~~~~~~~~ 100 (272)
+.++++. +++++ ||++| ++|+.+.+.|.+++.. +.++.+|.+... ....+++.+|+.++ |++ +.+ +.
T Consensus 13 ~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~v~~~-Pt~--~~~-g~ 82 (116)
T 2e7p_A 13 AKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTGRGTV-PNV--FIG-GK 82 (116)
T ss_dssp HHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHSCCSS-CEE--EET-TE
T ss_pred HHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhCCCCc-CEE--EEC-CE
Confidence 3344443 35544 99999 9999999999998654 345555544320 00259999999999 999 333 22
Q ss_pred ceeecCCCCC---ChHHHHHHHHHH
Q 024107 101 ISKFLLESDL---TPSNIEEFCSRL 122 (272)
Q Consensus 101 ~~~~~~~g~~---~~~~i~~fi~~~ 122 (272)
....+.|.. +.+.|.+++.+.
T Consensus 83 -~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 83 -QIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp -EEECHHHHHHHHHTTCHHHHHHHT
T ss_pred -EECChHHHHHHHhCChHHHHHHHc
Confidence 222222222 555777887773
No 406
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.87 E-value=5.1e-05 Score=57.45 Aligned_cols=93 Identities=5% Similarity=-0.029 Sum_probs=65.8
Q ss_pred CCcceEEEEEEcc-c-chHHHHHHHHHHHHHhcC---ceEEEEEeCCCc----ccc---------------------hhH
Q 024107 30 SPIKLQVYVFAKA-D-DLKSLLEPLEDIARNFKG---KIMFTAVDIADE----DLA---------------------KPF 79 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~-~c~~~~~~~~~~a~~~~~---~i~~~~vd~~~~----~~~---------------------~~l 79 (272)
.+++++|.||+.| + +|....+.+.++.+.+.+ .+.|+.|+++.. ... ..+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 4678999999999 7 999999999999999875 388988887621 000 122
Q ss_pred Hhhc----------------CCCCCCceEEEEEeCCcceeecCCCCC--ChHHHHHHHHHHhc
Q 024107 80 LTLF----------------GLEESKNTVVTAFDNKAISKFLLESDL--TPSNIEEFCSRLLH 124 (272)
Q Consensus 80 ~~~~----------------~i~~~~P~i~~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~ 124 (272)
.+.+ ++.+. |++ .+++.++...+.+.|.. +.+.|.+.++..+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~-p~~-~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQ-SSF-YLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSC-CEE-EEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeee-eEE-EEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 2222 34456 887 67776655555556654 57899999998764
No 407
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.83 E-value=0.00019 Score=56.37 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=36.7
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 203 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~ 203 (272)
.++.+||.||++||+.| ...|.+.++..+|+.. .+.+..|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~-g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF-GLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC-CEEEEEEECc
Confidence 36899999999999999 5678999999999864 4888888754
No 408
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.82 E-value=3.8e-05 Score=60.78 Aligned_cols=84 Identities=12% Similarity=0.092 Sum_probs=60.7
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeC--------------------------------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI-------------------------------------- 70 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~-------------------------------------- 70 (272)
.++.+++.|+++| ++|+++.+.+.++++. .+.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 3467899999999 9999999999998864 355554422
Q ss_pred --CCc-ccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 71 --ADE-DLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 71 --~~~-~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
... +....+++.+||.++ ||+ . +.++ ..+ .|..+.+.|.+++....
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gt-Pt~-v-~~dG--~~~--~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGT-PAV-V-LSNG--TLV--PGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSS-SEE-E-CTTS--CEE--ESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcc-CEE-E-EcCC--eEe--cCCCCHHHHHHHHHHhh
Confidence 100 001568899999999 999 4 4333 233 68889999999998764
No 409
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.81 E-value=0.00012 Score=54.26 Aligned_cols=108 Identities=15% Similarity=0.182 Sum_probs=76.2
Q ss_pred CCeEEecccchhHHhhcCCCcEEEE-EECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC--CC-CC-CCCcccC--
Q 024107 142 ANVQIVVGKTFDDLVLNSHKDVLLE-VYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS--AN-EH-PKLQVEE-- 214 (272)
Q Consensus 142 ~~v~~l~~~~~~~~v~~~~~~~lv~-f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~--~~-~~-~~~~v~~-- 214 (272)
..|..++.++...+. .+.-++.++ |....-..-..+.+.++++|+.+++ ++.|+.+|.+ .+ .. ..++++.
T Consensus 14 PLV~e~t~en~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg--ki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIF-GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHH-SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT--TCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHh-cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC--ceEEEEEecchHhHHHHHHHcCCCccc
Confidence 368899999988864 555555444 5443333456788999999999998 8999999984 33 22 3667775
Q ss_pred CCeEEEEeC-CCCcCceEee-CCCCHHHHHHHHHHHcCcCC
Q 024107 215 YPTLLFYPA-GDKANPIKVS-ARSSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 215 ~P~l~~~~~-~~~~~~~~~~-g~~~~~~l~~~i~~~~~~~~ 253 (272)
+|++.++.. +...+ ..+. +..+.+.|.+|+.+.+.-..
T Consensus 91 ~P~v~i~~~~~~~~K-y~~~~~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 91 CPAVRLITLEEEMTK-YKPESEELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp CSEEEEEECSSSCEE-ECCSCCCCCHHHHHHHHHHHHTTCS
T ss_pred CCEEEEEeccccccc-CCCCcccCCHHHHHHHHHHHHcCCc
Confidence 899999975 32221 1222 67899999999999986543
No 410
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.79 E-value=3.9e-05 Score=51.92 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=54.6
Q ss_pred EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CC-----CcccCCCeEEEEeCCCCcCceEeeCC
Q 024107 163 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PK-----LQVEEYPTLLFYPAGDKANPIKVSAR 235 (272)
Q Consensus 163 ~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~-----~~v~~~P~l~~~~~~~~~~~~~~~g~ 235 (272)
.++.|.++||++|...+..+.+. ++.|-.+|++.+ +. .. -+..++|+++ +.+|. ..+.
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~--------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~------~l~~ 69 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN--------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGS------TLTN 69 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSC------EEES
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc--------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCE------EEeC
Confidence 47789999999999988877663 577888899887 32 11 1567899874 44553 2234
Q ss_pred CCHHHHHHHHHHHcCcC
Q 024107 236 SSSKNIAAFIKEQLKEK 252 (272)
Q Consensus 236 ~~~~~l~~~i~~~~~~~ 252 (272)
.+.+.|.++|.+..+..
T Consensus 70 ~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 70 PSADEVKAKLVKIAGLE 86 (92)
T ss_dssp CCHHHHHHHHHHHHCCS
T ss_pred CCHHHHHHHHHHhcCCc
Confidence 68899999999987754
No 411
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.79 E-value=7.1e-05 Score=59.43 Aligned_cols=89 Identities=16% Similarity=0.195 Sum_probs=64.6
Q ss_pred CCCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------CCC----------
Q 024107 159 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------EHP---------- 208 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------------~~~---------- 208 (272)
.+++++|+|| ++||+.|....+.+.++.++|+.. ++.++.|+.+.. .++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK-NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH
Confidence 4679999999 999999999999999999999643 588888877541 000
Q ss_pred -CCcc-----cCCCeEEEEeCCCCcCceEeeC----CCCHHHHHHHHHHHc
Q 024107 209 -KLQV-----EEYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 249 (272)
Q Consensus 209 -~~~v-----~~~P~l~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~~ 249 (272)
.|++ ..+|+.+++...+.+ ...+.| ..+.+.+++.|+...
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I-~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCV-RHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBE-EEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHHh
Confidence 1245 257999999766555 223444 256788888888754
No 412
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.78 E-value=0.00011 Score=58.34 Aligned_cols=91 Identities=8% Similarity=0.084 Sum_probs=68.8
Q ss_pred CCcceEEEEEE-cc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCcc-------------------------cchhHHh
Q 024107 30 SPIKLQVYVFA-KA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADED-------------------------LAKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy~-~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~-------------------------~~~~l~~ 81 (272)
.+++++|.||+ .| ++|....|.+.+++++|.++ +.|+.|+++... ....+.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 45789999995 99 99999999999999999864 888888887421 0136788
Q ss_pred hcCCC------CCCceEEEEEeCCcceeecCCCC----CChHHHHHHHHHH
Q 024107 82 LFGLE------ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRL 122 (272)
Q Consensus 82 ~~~i~------~~~P~i~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~ 122 (272)
.||+. .. |++ .+++.++...+.+.|. ...+++.+.+...
T Consensus 148 ~ygv~~~~~g~~~-P~~-~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 148 AYGVFDEEDGNAF-RGL-FIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HTTCBCTTTSSBC-EEE-EEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeecCCCCcc-ceE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 99998 77 999 7887666555554333 4567777777664
No 413
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.78 E-value=0.00021 Score=54.09 Aligned_cols=93 Identities=8% Similarity=0.068 Sum_probs=67.2
Q ss_pred CCcEEEEEECCCCh-hHHHhHHHHHHHHHHhcCCC-ceEEEEEeCCCCC---------------CC--------------
Q 024107 160 HKDVLLEVYTPWCV-TCETTSKQIEKLAKHFKGLD-NLVIAKIDASANE---------------HP-------------- 208 (272)
Q Consensus 160 ~~~~lv~f~~~~C~-~c~~~~~~~~~~a~~~~~~~-~v~~~~id~~~~~---------------~~-------------- 208 (272)
+++++|+||++||+ .|....+.+.++.++++... ++.+..|.++..+ ..
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 78999999999997 69999999999999996421 6888888765210 00
Q ss_pred ----C---------CcccCCCeEEEEeCCCCcCceEeeCC-CCHHHHHHHHHHHcCcCC
Q 024107 209 ----K---------LQVEEYPTLLFYPAGDKANPIKVSAR-SSSKNIAAFIKEQLKEKD 253 (272)
Q Consensus 209 ----~---------~~v~~~P~l~~~~~~~~~~~~~~~g~-~~~~~l~~~i~~~~~~~~ 253 (272)
. +.+...|+++++...+.+ .-.+.|. .+.+.|.+.|.+......
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i-~~~~~g~~~~~~~i~~~l~~~~~~~~ 165 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQI-KDYIYGVNYNYLEFVNALRLARGEGH 165 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBE-EEEEESSSCCHHHHHHHHHHHTTCSC
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeE-EEEEeCCCCCHHHHHHHHHHhhcccc
Confidence 0 113456888888666555 2246665 778999999998876543
No 414
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.72 E-value=5.5e-05 Score=61.12 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=63.6
Q ss_pred CCCc-EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC------------------C----------CC-
Q 024107 159 SHKD-VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------------------E----------HP- 208 (272)
Q Consensus 159 ~~~~-~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~------------------~----------~~- 208 (272)
.++. +|++|+++||+.|....+.+.++..+|+.. ++.++.|+++.. . +.
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~-gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL-GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVAR 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC-CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHH
Confidence 3454 566789999999999999999999999764 588888888641 1 11
Q ss_pred CCccc-------CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHHc
Q 024107 209 KLQVE-------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 249 (272)
Q Consensus 209 ~~~v~-------~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 249 (272)
.|++. ++|+++++..++.+. ..+.|. .+.+.|+..|+...
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~-~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIR-TMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEE-EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEE-EEEecCCcccchhHHHHHHHHHHH
Confidence 23554 889999996655542 233343 47889998888754
No 415
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.69 E-value=0.00013 Score=57.42 Aligned_cols=79 Identities=11% Similarity=0.174 Sum_probs=58.9
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC-------------------------------------
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA------------------------------------- 71 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~------------------------------------- 71 (272)
..+..++.|+++| ++|+++.+.+.++.+. + +.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 3467899999999 9999999999998763 3 555543221
Q ss_pred -------CcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHH
Q 024107 72 -------DEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSR 121 (272)
Q Consensus 72 -------~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 121 (272)
.. .++++++||+++ ||+ .+ .++ . .+.|..+.+.|.+++..
T Consensus 162 ~~~~~v~~~---~~l~~~~gV~gT-Pt~-vi-~nG--~--~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKH---YELGIQFGVRGT-PSI-VT-STG--E--LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHH---HHHHHHHTCCSS-CEE-EC-TTS--C--CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHcCCCcC-CEE-EE-eCC--E--EecCCCCHHHHHHHHHh
Confidence 11 467899999999 999 44 333 2 34788899999999876
No 416
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.68 E-value=0.00072 Score=51.58 Aligned_cols=90 Identities=9% Similarity=0.148 Sum_probs=67.5
Q ss_pred CCCcEEEEEECCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCCCC----------------CC----CCcccCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASANE----------------HP----KLQVEEY 215 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~~~----------------~~----~~~v~~~ 215 (272)
..|.++|+++++||..|..+...+ ..+..-++. ++.+...|....+ .. .+++.++
T Consensus 54 e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~--nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~ 131 (178)
T 2ec4_A 54 DRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ--NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQF 131 (178)
T ss_dssp TCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH--TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTC
T ss_pred hCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc--CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCC
Confidence 478999999999999999887554 456666666 7889999988654 11 2789999
Q ss_pred CeEEEEeCC-CCcCc-eEeeCCCCHHHHHHHHHHHcC
Q 024107 216 PTLLFYPAG-DKANP-IKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 216 P~l~~~~~~-~~~~~-~~~~g~~~~~~l~~~i~~~~~ 250 (272)
|++.++... ..... -+..|..+.+.|++.+.+.+.
T Consensus 132 P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 132 PLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp SEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 999999433 22211 258899999999998887654
No 417
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.67 E-value=0.00018 Score=53.77 Aligned_cols=91 Identities=5% Similarity=-0.005 Sum_probs=64.3
Q ss_pred CCcceEEEEEE-cc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc------------------chhHHhhcCCCC-
Q 024107 30 SPIKLQVYVFA-KA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL------------------AKPFLTLFGLEE- 87 (272)
Q Consensus 30 ~~~~~~v~fy~-~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~------------------~~~l~~~~~i~~- 87 (272)
.+++++|.||+ .| ++|....+.+.++.+++.++ +.++.|.++.... ...+.+.||+..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 35688999997 99 99999999999999999754 7788777763211 136777888876
Q ss_pred -----------CCceEEEEEeCCcceeecCCCC---CChHHHHHHHHHH
Q 024107 88 -----------SKNTVVTAFDNKAISKFLLESD---LTPSNIEEFCSRL 122 (272)
Q Consensus 88 -----------~~P~i~~~~~~~~~~~~~~~g~---~~~~~i~~fi~~~ 122 (272)
. |+. .+++.++...+.+.+. ...+.+.+.++..
T Consensus 114 ~~~~~~~~~~~~-p~~-~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIE-RST-FLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEEC-CEE-EEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccCcc-eEE-EEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 7 999 7887666555544332 3345566666553
No 418
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.66 E-value=2.2e-05 Score=54.44 Aligned_cols=56 Identities=14% Similarity=0.230 Sum_probs=38.5
Q ss_pred EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC--------CCC-CCcccCCCeEEEEeCCC
Q 024107 163 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN--------EHP-KLQVEEYPTLLFYPAGD 225 (272)
Q Consensus 163 ~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~--------~~~-~~~v~~~P~l~~~~~~~ 225 (272)
.+++|+++||++|+.+.+.+.+++..+. + +..+|++.+ .+. .+++.++|++ |.+|+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~ 77 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKE 77 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCE
Confidence 4777999999999999999987644332 2 444555544 122 4588999997 44554
No 419
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.66 E-value=0.00026 Score=53.51 Aligned_cols=85 Identities=11% Similarity=0.070 Sum_probs=59.1
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCC----------C--------------CCCccc-
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE----------H--------------PKLQVE- 213 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~----------~--------------~~~~v~- 213 (272)
+++++|.|| +.||+.|....+.+.++..++ . ++.+..|..+..+ + ..|++.
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 123 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-E--GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDMEKYGVLI 123 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGGGGGTCBB
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C--CceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcHHHhCCEe
Confidence 678999998 899999999999999998888 3 6888888765420 0 112222
Q ss_pred --------CCCeEEEEeCCCCcCceEeeC-----CCCHHHHHHHHHHH
Q 024107 214 --------EYPTLLFYPAGDKANPIKVSA-----RSSSKNIAAFIKEQ 248 (272)
Q Consensus 214 --------~~P~l~~~~~~~~~~~~~~~g-----~~~~~~l~~~i~~~ 248 (272)
..|+.+++..++.+ ..++.| ..+.+.+++.|++.
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i-~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKV-AYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBE-EEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cccccCCceeeEEEEEcCCCeE-EEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 25899999755554 224433 35568888888753
No 420
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.65 E-value=0.00017 Score=55.50 Aligned_cols=88 Identities=6% Similarity=0.027 Sum_probs=63.0
Q ss_pred CCcEEEEEEC-CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCC--------------C--C-----------CCc
Q 024107 160 HKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE--------------H--P-----------KLQ 211 (272)
Q Consensus 160 ~~~~lv~f~~-~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~--------------~--~-----------~~~ 211 (272)
+++++|+||+ .||+.|....+.+.++..+++.. ++.+..|..+..+ + + .|+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKL-GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 6789999995 99999999999999999998753 5888888775320 0 0 124
Q ss_pred cc------CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHHc
Q 024107 212 VE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 249 (272)
Q Consensus 212 v~------~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 249 (272)
+. ..|+.+++...+.+ ...+.|. .+.+.+++.|+...
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i-~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGII-QAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 43 36999999765555 2245553 25788888888754
No 421
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.63 E-value=0.00056 Score=51.75 Aligned_cols=90 Identities=17% Similarity=0.196 Sum_probs=60.4
Q ss_pred CCCcEEEEEECCCCh-hHHHhHHHHHHHHHHhcCCC-ceEEEEEeCCCC-CC--------CCC-----------------
Q 024107 159 SHKDVLLEVYTPWCV-TCETTSKQIEKLAKHFKGLD-NLVIAKIDASAN-EH--------PKL----------------- 210 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~-~c~~~~~~~~~~a~~~~~~~-~v~~~~id~~~~-~~--------~~~----------------- 210 (272)
.++.++|+||.+||+ .|....+.+.++.+.++... ++.+..|.++.. +. .++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~ 110 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLED 110 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCcccHHH
Confidence 478999999999996 79998888888888775433 677887766532 10 011
Q ss_pred -------------------cccCCCeEEEEeCCCCcCceEeeCC--CCHHHHHHHHHHHc
Q 024107 211 -------------------QVEEYPTLLFYPAGDKANPIKVSAR--SSSKNIAAFIKEQL 249 (272)
Q Consensus 211 -------------------~v~~~P~l~~~~~~~~~~~~~~~g~--~~~~~l~~~i~~~~ 249 (272)
.+.+.|+++++...+.+ .-.|.|. ...+.|++-|+..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i-~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 111 ITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKV-MKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp HHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCE-EEEEESSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeE-EEEECCCCCCCHHHHHHHHHHHh
Confidence 12234788888655554 2257764 45688888777654
No 422
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.62 E-value=0.00016 Score=55.22 Aligned_cols=87 Identities=10% Similarity=0.114 Sum_probs=60.2
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC----------------------CCccc--
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP----------------------KLQVE-- 213 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~----------------------~~~v~-- 213 (272)
+++++|+|| +.||+.|....+.+.++..+++.. .+.+..|..+.. ... .|++.
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~-~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI-NATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT-TEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 568888888 999999999999999999999865 588888887652 110 12332
Q ss_pred ----------CCCeEEEEeCCCCcCceEeeCC---CCHHHHHHHHHHH
Q 024107 214 ----------EYPTLLFYPAGDKANPIKVSAR---SSSKNIAAFIKEQ 248 (272)
Q Consensus 214 ----------~~P~l~~~~~~~~~~~~~~~g~---~~~~~l~~~i~~~ 248 (272)
..|+.+++...+.+ ...+.+. ...+.+++.|++.
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I-~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRI-VEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBE-EEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccCcccCCcceEEEEECCCCEE-EEEEcCCCCCCCHHHHHHHHHHH
Confidence 25889999665554 2234442 3456777777654
No 423
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.62 E-value=3.9e-05 Score=51.45 Aligned_cols=53 Identities=19% Similarity=0.339 Sum_probs=38.9
Q ss_pred EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC--CC-CCC-CC-cccCCCeEEEEeCCC
Q 024107 163 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS--AN-EHP-KL-QVEEYPTLLFYPAGD 225 (272)
Q Consensus 163 ~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~--~~-~~~-~~-~v~~~P~l~~~~~~~ 225 (272)
.++.|+++||++|+.+.+.+.+. .+.+..+|++ .. ++. .+ ++.++|+++ .+|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~--------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK--------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH--------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTE
T ss_pred eEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCE
Confidence 47789999999999999888875 3566777777 22 332 45 788999984 3554
No 424
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.61 E-value=1.9e-05 Score=55.84 Aligned_cols=58 Identities=12% Similarity=0.184 Sum_probs=40.0
Q ss_pred CcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCC--------CC-CCcccCCCeEEEEeCCC
Q 024107 161 KDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE--------HP-KLQVEEYPTLLFYPAGD 225 (272)
Q Consensus 161 ~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~--------~~-~~~v~~~P~l~~~~~~~ 225 (272)
...++.|+++||++|+.+.+.+.+++... + + +..+|++.+. +. .+++.++|++++ +|+
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~--~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~ 84 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKR-G--A--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKT 84 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCT-T--S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCc-C--c--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCE
Confidence 44578899999999999998887653221 1 2 6677776652 32 468899998743 554
No 425
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.54 E-value=0.0005 Score=55.19 Aligned_cols=88 Identities=11% Similarity=0.160 Sum_probs=63.6
Q ss_pred CCCcEEEEEEC-CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C------------------CC----------
Q 024107 159 SHKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E------------------HP---------- 208 (272)
Q Consensus 159 ~~~~~lv~f~~-~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~------------------~~---------- 208 (272)
.+++++|+||+ .||+.|....+.+.++..+|+.. ++.+..|.++.. . ++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~-gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~ 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI-NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH
Confidence 36799999998 99999999999999999999864 588888887642 1 00
Q ss_pred -CCccc------CCCeEEEEeCCCCcCceEeeC----CCCHHHHHHHHHHH
Q 024107 209 -KLQVE------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQ 248 (272)
Q Consensus 209 -~~~v~------~~P~l~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~ 248 (272)
.|++. .+|+.+++...+.+. .++.+ ..+.+.+++.|+..
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~-~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLR-QITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEE-EEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEE-EEEecCCCCCCCHHHHHHHHHHh
Confidence 12444 579999997665552 23333 35578888887754
No 426
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.53 E-value=7.5e-05 Score=51.30 Aligned_cols=56 Identities=7% Similarity=0.090 Sum_probs=41.6
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-CC----C-cccCCCeEEEEeCCC
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-PK----L-QVEEYPTLLFYPAGD 225 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~~----~-~v~~~P~l~~~~~~~ 225 (272)
...-++.|+++||++|+.+...+.+. .+.+..+|++.+ +. .. . +..++|++ |.+|+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~--------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~ 76 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK--------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQ 76 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH--------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC--------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCE
Confidence 45567889999999999999998876 456677888777 33 22 2 77889987 44654
No 427
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.52 E-value=0.00018 Score=55.68 Aligned_cols=43 Identities=21% Similarity=0.362 Sum_probs=39.1
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 203 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~ 203 (272)
+++.+++.|+++||++|+.+.+.+.++.+.+.+ ++.+..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 467899999999999999999999999999987 7999999886
No 428
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.51 E-value=0.00024 Score=48.98 Aligned_cols=71 Identities=17% Similarity=0.204 Sum_probs=48.2
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC------CCC-----CCcccCCCeEEEEeCCCCcC
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN------EHP-----KLQVEEYPTLLFYPAGDKAN 228 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~------~~~-----~~~v~~~P~l~~~~~~~~~~ 228 (272)
++..+++|+++||++|+.+.+.+.+. .+.+-.+|++.. +.. ..+..++|++++ +|+
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~--------~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~--- 86 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDL--------GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE--- 86 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHH--------TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT---
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHc--------CCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC---
Confidence 34557789999999999999888876 244444555532 111 137889999876 331
Q ss_pred ceEeeCCCCHHHHHHHH
Q 024107 229 PIKVSARSSSKNIAAFI 245 (272)
Q Consensus 229 ~~~~~g~~~~~~l~~~i 245 (272)
.+.|+.+.+.|.++|
T Consensus 87 --~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 --KAIVGFKEKEIRESL 101 (103)
T ss_dssp --EEEESCCHHHHHHHT
T ss_pred --EEEEcCCHHHHHHHh
Confidence 356677888887765
No 429
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.50 E-value=7.2e-05 Score=50.40 Aligned_cols=67 Identities=10% Similarity=0.096 Sum_probs=45.9
Q ss_pred EEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC----------CC-CCCcccCCCeEEEEeCCCCcCceEe
Q 024107 164 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----------EH-PKLQVEEYPTLLFYPAGDKANPIKV 232 (272)
Q Consensus 164 lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~----------~~-~~~~v~~~P~l~~~~~~~~~~~~~~ 232 (272)
++.|+++||++|+.+...+.++. +.+-.+|++.. ++ ..+++.++|++++ +|. .
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g--------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~------~ 77 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG--------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK------H 77 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE------E
T ss_pred EEEEECCCChHHHHHHHHHHHcC--------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE------E
Confidence 67789999999999998887762 33344555421 11 1347789999976 442 3
Q ss_pred eCCCCHHHHHHHHH
Q 024107 233 SARSSSKNIAAFIK 246 (272)
Q Consensus 233 ~g~~~~~~l~~~i~ 246 (272)
.++.+.+.|.++|+
T Consensus 78 i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 78 VLGYNEEKLKELIR 91 (92)
T ss_dssp EESCCHHHHHHHHH
T ss_pred EeCCCHHHHHHHhc
Confidence 34568899998875
No 430
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.50 E-value=0.00012 Score=48.06 Aligned_cols=66 Identities=8% Similarity=0.162 Sum_probs=44.6
Q ss_pred EEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-----CCCcccCCCeEEEEeCCCCcCceEeeCCCC
Q 024107 164 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-----PKLQVEEYPTLLFYPAGDKANPIKVSARSS 237 (272)
Q Consensus 164 lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-----~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~ 237 (272)
++.|+++||++|+.+.+.+.+. ++.+..+|++.+ +. ..+++.++|+++ .+|.. ..|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~-----i~g--- 64 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK--------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQH-----IGG--- 64 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEE-----EES---
T ss_pred EEEEECCCChhHHHHHHHHHHC--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEE-----EeC---
Confidence 6778999999999999888765 355666777765 22 134788999984 35532 222
Q ss_pred HHHHHHHHHH
Q 024107 238 SKNIAAFIKE 247 (272)
Q Consensus 238 ~~~l~~~i~~ 247 (272)
.+.|.+++.+
T Consensus 65 ~~~i~~~~~~ 74 (82)
T 1fov_A 65 YDDLYALDAR 74 (82)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 3566666653
No 431
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.48 E-value=0.00029 Score=56.59 Aligned_cols=87 Identities=6% Similarity=-0.004 Sum_probs=60.9
Q ss_pred cceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCC--------------------------------------
Q 024107 32 IKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIAD-------------------------------------- 72 (272)
Q Consensus 32 ~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~-------------------------------------- 72 (272)
+..++.|+.+| ++|+++.+.+.++.+. +++.|..+...-
T Consensus 98 k~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~~ 175 (241)
T 1v58_A 98 PVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPA 175 (241)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCCS
T ss_pred CeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCccc
Confidence 45788899999 9999999999988775 457776654410
Q ss_pred -----c----ccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChHHHHHHHHHHh
Q 024107 73 -----E----DLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 73 -----~----~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 123 (272)
. +....+++.+||.++ ||+ .+.+++ +....+.|..+.+.|.+++....
T Consensus 176 ~~~~~~~~~v~~~~~l~~~~gv~gt-Pt~-vi~~~~-G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 176 NVSTEQMKVLSDNEKLMDDLGANVT-PAI-YYMSKE-NTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTCCSS-CEE-EEEETT-TEEEEEESSCCHHHHHHHTTC--
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCCC-CEE-EEECCC-CCEEEecCCCCHHHHHHHHHHHH
Confidence 0 001457789999999 999 666532 22233478889998888877653
No 432
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.46 E-value=5.5e-05 Score=53.78 Aligned_cols=55 Identities=15% Similarity=0.257 Sum_probs=39.1
Q ss_pred EEEEECCCChhHHHh-HHHHHHHHHHhcCCCceEEEEEeCCCCC--------CC-CCcccCCCeEEEEeCCC
Q 024107 164 LLEVYTPWCVTCETT-SKQIEKLAKHFKGLDNLVIAKIDASANE--------HP-KLQVEEYPTLLFYPAGD 225 (272)
Q Consensus 164 lv~f~~~~C~~c~~~-~~~~~~~a~~~~~~~~v~~~~id~~~~~--------~~-~~~v~~~P~l~~~~~~~ 225 (272)
++.|+++||++|+.+ .+.+.+.+. . .+.+..+|++.+. +. .+++.++|++ |.+|+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~---~--~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~ 91 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV---P--RSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGK 91 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC---C--GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC---C--CCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 667999999999998 777765431 1 3677778877652 32 4588899987 55664
No 433
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.46 E-value=0.00069 Score=50.00 Aligned_cols=80 Identities=19% Similarity=0.314 Sum_probs=57.7
Q ss_pred cCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC--------------------------------
Q 024107 158 NSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------------------- 205 (272)
Q Consensus 158 ~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------------------------- 205 (272)
.+.+.+++.|+.++|++|+.+.+.+.++ + ++++......-.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM-----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC-----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc-----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 3467889999999999999999987654 2 566655543210
Q ss_pred -----CC-----------CCCcccCCCeEEEEeCCCCcCceEeeCCCCHHHHHHHHHHHcC
Q 024107 206 -----EH-----------PKLQVEEYPTLLFYPAGDKANPIKVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 206 -----~~-----------~~~~v~~~P~l~~~~~~~~~~~~~~~g~~~~~~l~~~i~~~~~ 250 (272)
++ .+++|+++|++++ .+|. .+.|..+.+.|.++|.+...
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~-----~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR-----TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC-----EEESCCCTTHHHHHHHHTSC
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE-----EeeCCCCHHHHHHHHHHHHH
Confidence 00 0237899999998 5553 47899999999999987653
No 434
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.43 E-value=8.9e-05 Score=53.66 Aligned_cols=84 Identities=7% Similarity=0.142 Sum_probs=50.4
Q ss_pred cchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC----C----CC-CCcccCCCeEEE
Q 024107 150 KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----E----HP-KLQVEEYPTLLF 220 (272)
Q Consensus 150 ~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~----~----~~-~~~v~~~P~l~~ 220 (272)
+.+.+.+.. + . ++.|+++||++|+.+.+.+.++ .+.+..+|++.. + +. .+++.++|+++
T Consensus 18 ~~~~~~i~~-~-~-vvvf~~~~Cp~C~~~~~~L~~~--------~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~- 85 (130)
T 2cq9_A 18 NQIQETISD-N-C-VVIFSKTSCSYCTMAKKLFHDM--------NVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF- 85 (130)
T ss_dssp HHHHHHHHH-S-S-EEEEECSSCSHHHHHHHHHHHH--------TCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE-
T ss_pred HHHHHHHcC-C-c-EEEEEcCCChHHHHHHHHHHHc--------CCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE-
Confidence 345554422 2 3 4459999999999999998876 234555666654 1 32 45889999984
Q ss_pred EeCCCCcCceEe---eCCCCHHHHHHHHHHH
Q 024107 221 YPAGDKANPIKV---SARSSSKNIAAFIKEQ 248 (272)
Q Consensus 221 ~~~~~~~~~~~~---~g~~~~~~l~~~i~~~ 248 (272)
.+|+.+. .+ .+......|.++|++.
T Consensus 86 -i~G~~ig--g~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 86 -VNGTFIG--GATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp -ETTEEEE--EHHHHHHHHHHTSSHHHHHHH
T ss_pred -ECCEEEc--ChHHHHHHHHcCcHHHHHHHc
Confidence 3554321 11 1122344567777654
No 435
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.41 E-value=0.00063 Score=43.50 Aligned_cols=67 Identities=15% Similarity=0.237 Sum_probs=49.4
Q ss_pred EEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHh---hcCCCCCCceEEEEEeCCcceeecCCCCC
Q 024107 35 QVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLT---LFGLEESKNTVVTAFDNKAISKFLLESDL 110 (272)
Q Consensus 35 ~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~---~~~i~~~~P~i~~~~~~~~~~~~~~~g~~ 110 (272)
++.|+++| ++|+++.+.+.++ .+.|..+|.+.. +.+.. .+|+.+. |++ .+ ++ ... ++.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~---~~~~~~~~~~~~~~v-P~l-~~--~g--~~~---~g~ 64 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLD---DEARDYVMALGYVQA-PVV-EV--DG--EHW---SGF 64 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTC---HHHHHHHHHTTCBCC-CEE-EE--TT--EEE---ESC
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCC---HHHHHHHHHcCCCcc-CEE-EE--CC--eEE---cCC
Confidence 56789999 9999999998865 277888898876 44444 8999999 999 53 33 222 346
Q ss_pred ChHHHHHHH
Q 024107 111 TPSNIEEFC 119 (272)
Q Consensus 111 ~~~~i~~fi 119 (272)
+.+.|.+++
T Consensus 65 ~~~~l~~~l 73 (75)
T 1r7h_A 65 RPERIKQLQ 73 (75)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 777777765
No 436
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.35 E-value=0.00062 Score=52.47 Aligned_cols=41 Identities=7% Similarity=0.020 Sum_probs=35.8
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI 70 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~ 70 (272)
.++..++.|++.| ++|.++.|.+.++.+++.+++.|..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 4467899999999 9999999999999999988888876655
No 437
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.35 E-value=0.0001 Score=54.53 Aligned_cols=63 Identities=8% Similarity=0.172 Sum_probs=40.7
Q ss_pred cchhHHhhcCCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC----C----CC-CCcccCCCeEEE
Q 024107 150 KTFDDLVLNSHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN----E----HP-KLQVEEYPTLLF 220 (272)
Q Consensus 150 ~~~~~~v~~~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~----~----~~-~~~v~~~P~l~~ 220 (272)
..+.+.+.. + . ++.|+++||++|+.+.+.+.++. +.+..+|++.. + +. .+++.++|+++
T Consensus 40 ~~~~~~i~~-~-~-Vvvf~~~~Cp~C~~~k~~L~~~~--------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if- 107 (146)
T 2ht9_A 40 NQIQETISD-N-C-VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF- 107 (146)
T ss_dssp HHHHHHHHH-C-S-EEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE-
T ss_pred HHHHHHhcC-C-C-EEEEECCCChhHHHHHHHHHHcC--------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE-
Confidence 345554422 2 3 44499999999999999988762 33445555543 1 22 45889999984
Q ss_pred EeCCC
Q 024107 221 YPAGD 225 (272)
Q Consensus 221 ~~~~~ 225 (272)
.+|+
T Consensus 108 -i~G~ 111 (146)
T 2ht9_A 108 -VNGT 111 (146)
T ss_dssp -ETTE
T ss_pred -ECCE
Confidence 3554
No 438
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.34 E-value=0.00074 Score=51.25 Aligned_cols=90 Identities=9% Similarity=0.043 Sum_probs=60.1
Q ss_pred CCcceEEEEEEcc--cchHHHHHHHHHHHHHhcCceEEEEEeCCCccc-------------------chhHHhhcCCCCC
Q 024107 30 SPIKLQVYVFAKA--DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDL-------------------AKPFLTLFGLEES 88 (272)
Q Consensus 30 ~~~~~~v~fy~~~--~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~-------------------~~~l~~~~~i~~~ 88 (272)
.+++++|.||+.| ++|....|.+.+++++ ..+.|+.|+.+.... ...+.+.||+...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 4578999999888 8999999999999998 448888888762100 1468888998754
Q ss_pred C--------ceEEEEEeCCcceeecCCC--CCChHHHHHHHHHH
Q 024107 89 K--------NTVVTAFDNKAISKFLLES--DLTPSNIEEFCSRL 122 (272)
Q Consensus 89 ~--------P~i~~~~~~~~~~~~~~~g--~~~~~~i~~fi~~~ 122 (272)
. |+. .+++.++...+.+.| .....++.+.++.+
T Consensus 121 ~~~~~g~~~p~~-~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l 163 (175)
T 1xvq_A 121 DGPMAGLLARAI-VVIGADGNVAYTELVPEIAQEPNYEAALAAL 163 (175)
T ss_dssp SSTTTTSBCSEE-EEECTTSBEEEEEECSBTTCCCCHHHHHHHH
T ss_pred ccccCCcccceE-EEECCCCeEEEEEECCCcCCCCCHHHHHHHH
Confidence 1 677 667655544554432 22233445554443
No 439
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.32 E-value=0.00037 Score=53.98 Aligned_cols=44 Identities=23% Similarity=0.372 Sum_probs=38.8
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA 204 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~ 204 (272)
+.+.++|.|+++||++|+.+.+.+.++.+.+.+ ++.|..++...
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~~ 66 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVVW 66 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECCC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCCC
Confidence 357799999999999999999999999998887 78998888753
No 440
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.31 E-value=0.00075 Score=50.23 Aligned_cols=83 Identities=10% Similarity=0.100 Sum_probs=53.6
Q ss_pred ceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc------------------cchhHHhhcCCCCCCc--
Q 024107 33 KLQVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED------------------LAKPFLTLFGLEESKN-- 90 (272)
Q Consensus 33 ~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~------------------~~~~l~~~~~i~~~~P-- 90 (272)
.++|.|| +.| ++|....|.+.++.+++.++-.++.|.++... ....+++.||+... |
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~-p~~ 115 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKT-PLS 115 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSS-SSS
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccc-ccC
Confidence 5677777 899 99999999999999999853256666554210 01468889999887 8
Q ss_pred ----eEEEEEeCCcceeecCCCCCChHHHHHH
Q 024107 91 ----TVVTAFDNKAISKFLLESDLTPSNIEEF 118 (272)
Q Consensus 91 ----~i~~~~~~~~~~~~~~~g~~~~~~i~~f 118 (272)
+.+.+ .++ ...+.+.|......+...
T Consensus 116 g~~~~~~li-~~G-~i~~~~~g~~~~~~~~~~ 145 (159)
T 2a4v_A 116 GSIRSHFIF-VDG-KLKFKRVKISPEVSVNDA 145 (159)
T ss_dssp CBCCEEEEE-ETT-EEEEEEESCCHHHHHHHH
T ss_pred CccceEEEE-cCC-EEEEEEccCCccccHHHH
Confidence 44245 444 345545555443333333
No 441
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.30 E-value=0.0021 Score=50.55 Aligned_cols=41 Identities=7% Similarity=-0.015 Sum_probs=36.0
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIA 71 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~ 71 (272)
+++.++|.|++.| ++|. -.|.|+++.++|.++ +.++.|.|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 4578999999999 9998 789999999999854 899999876
No 442
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.29 E-value=0.00036 Score=54.88 Aligned_cols=88 Identities=11% Similarity=0.138 Sum_probs=64.2
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-------------------CCC-----------
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------------EHP----------- 208 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------------~~~----------- 208 (272)
+++++|+|| ++||+.|....+.+.++..+|+.. ++.++.|..+.. .++
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 678999999 999999999999999999999754 588888877542 000
Q ss_pred CCccc------CCCeEEEEeCCCCcCceEeeCC----CCHHHHHHHHHHHc
Q 024107 209 KLQVE------EYPTLLFYPAGDKANPIKVSAR----SSSKNIAAFIKEQL 249 (272)
Q Consensus 209 ~~~v~------~~P~l~~~~~~~~~~~~~~~g~----~~~~~l~~~i~~~~ 249 (272)
.|++. .+|+.+++...+.+ ...+.|. .+.+.+++.|+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I-~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGIL-RQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHhh
Confidence 12442 58999999766555 2234342 46788888888754
No 443
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.29 E-value=0.0011 Score=52.46 Aligned_cols=92 Identities=3% Similarity=0.026 Sum_probs=67.1
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc-------------------------chhHHh
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL-------------------------AKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~~-------------------------~~~l~~ 81 (272)
.+++++|.|| +.| ++|....|.+.+++++|.+ .+.|+.|.++.... ...+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 4578999999 999 9999999999999999863 47777777653210 124667
Q ss_pred hcCCC-----CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHh
Q 024107 82 LFGLE-----ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 123 (272)
Q Consensus 82 ~~~i~-----~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 123 (272)
.||+. .. |+. .+++.++...+.+.| ..+.+++.+.++...
T Consensus 135 ~ygv~~~~g~~~-P~~-~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 135 NYNVLYDNSFAL-RGL-FIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HTTCEETTTEEC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcc-ceE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 77773 56 998 778766555554433 367888998888865
No 444
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.28 E-value=0.0015 Score=50.36 Aligned_cols=42 Identities=19% Similarity=0.157 Sum_probs=37.8
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA 71 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~ 71 (272)
.++.+++.|+++| ++|+++.|.+.++++.+.+++.|..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 4567899999999 99999999999999999888889888875
No 445
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.25 E-value=0.0011 Score=53.65 Aligned_cols=86 Identities=12% Similarity=0.157 Sum_probs=61.6
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C------------------CC-----------
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E------------------HP----------- 208 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~------------------~~----------- 208 (272)
+++++|+|| +.||+.|....+.+.++..+|+.. ++.+..|.++.. . ++
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~-gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 678999998 999999999999999999999864 588888887652 1 00
Q ss_pred CCccc------CCCeEEEEeCCCCcCceEeeC----CCCHHHHHHHHHH
Q 024107 209 KLQVE------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKE 247 (272)
Q Consensus 209 ~~~v~------~~P~l~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~ 247 (272)
.|++. .+|+++++...+.+. .++.+ ..+.+.+++.|+.
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~-~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILR-QITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEE-EEEEECTTCCCCHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEE-EEEecCCCCCCCHHHHHHHHHh
Confidence 01332 469999997666552 23333 3556788777765
No 446
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.25 E-value=0.00036 Score=46.36 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=47.3
Q ss_pred cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----CC-CCCcc-----cCCCeEEEEeCCCCcCce
Q 024107 162 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----EH-PKLQV-----EEYPTLLFYPAGDKANPI 230 (272)
Q Consensus 162 ~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----~~-~~~~v-----~~~P~l~~~~~~~~~~~~ 230 (272)
..++.|+++||++|+.+...+.+.. - .+.+..+|...+ ++ ...+. .++|++.+ +|.
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i--~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~----- 70 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----I--AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDE----- 70 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----C--CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTE-----
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----C--CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCE-----
Confidence 3478899999999999988776542 1 355555555433 12 23455 89999854 553
Q ss_pred EeeCCCCHHHHHHHHHHHcC
Q 024107 231 KVSARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 231 ~~~g~~~~~~l~~~i~~~~~ 250 (272)
+.| ..+.+.+++.+.++
T Consensus 71 -~i~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 71 -HIG--GFTELKANADKILN 87 (89)
T ss_dssp -EEE--SHHHHHHTHHHHTT
T ss_pred -EEe--ChHHHHHHHHHHhc
Confidence 222 45778888777654
No 447
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.22 E-value=0.0016 Score=49.52 Aligned_cols=91 Identities=5% Similarity=-0.069 Sum_probs=61.3
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc------------------chhHHhhcCCCC-
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL------------------AKPFLTLFGLEE- 87 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~------------------~~~l~~~~~i~~- 87 (272)
.+++++|.|| +.| +.|....+.+.++.+++.++ +.++.|.++.... ...+++.||+..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 3557888888 899 99999999999999999864 7787777764321 135666777742
Q ss_pred -----------CCceEEEEEeCCcceeecCCCC---CChHHHHHHHHHH
Q 024107 88 -----------SKNTVVTAFDNKAISKFLLESD---LTPSNIEEFCSRL 122 (272)
Q Consensus 88 -----------~~P~i~~~~~~~~~~~~~~~g~---~~~~~i~~fi~~~ 122 (272)
. |+. .+++.++...+.+.+. ...+.+.+.++..
T Consensus 130 ~~~~g~~~~~~~-p~~-~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 130 KTMYGRQVIGIE-RST-FLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp ECCC--CEEEEC-CEE-EEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccCcccCCcc-eEE-EEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 4 777 6777665555444332 3455566655543
No 448
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.22 E-value=0.00019 Score=49.76 Aligned_cols=62 Identities=19% Similarity=0.293 Sum_probs=42.2
Q ss_pred chhHHhhcCCCcEEEEEEC-----CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-----CCcccCCCeEE
Q 024107 151 TFDDLVLNSHKDVLLEVYT-----PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-----KLQVEEYPTLL 219 (272)
Q Consensus 151 ~~~~~v~~~~~~~lv~f~~-----~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-----~~~v~~~P~l~ 219 (272)
.+.+.+ . ...++| |++ +||++|+.+.+.+.+. .+.+..+|++.+ +.. .+++.++|++
T Consensus 9 ~~~~~i-~-~~~vvv-f~~g~~~~~~C~~C~~~~~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v- 76 (105)
T 2yan_A 9 RLKVLT-N-KASVML-FMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL- 76 (105)
T ss_dssp HHHHHH-T-SSSEEE-EESBCSSSBCTTHHHHHHHHHHHH--------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE-
T ss_pred HHHHHh-c-cCCEEE-EEecCCCCCCCccHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE-
Confidence 345544 2 234444 676 9999999999998876 366778888776 321 2478899998
Q ss_pred EEeCCC
Q 024107 220 FYPAGD 225 (272)
Q Consensus 220 ~~~~~~ 225 (272)
|.+|+
T Consensus 77 -~i~g~ 81 (105)
T 2yan_A 77 -YVKGE 81 (105)
T ss_dssp -EETTE
T ss_pred -EECCE
Confidence 44654
No 449
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.21 E-value=0.0024 Score=49.93 Aligned_cols=41 Identities=5% Similarity=-0.071 Sum_probs=35.4
Q ss_pred CCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCC
Q 024107 30 SPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIA 71 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~ 71 (272)
+++.++|.|++.| ++| .-.|.|.++.++|.++ +.++.|.|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 4578999999999 999 5789999999999864 888888875
No 450
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.16 E-value=0.00039 Score=48.76 Aligned_cols=52 Identities=12% Similarity=0.354 Sum_probs=36.0
Q ss_pred EEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-----C----CCC-CcccCCCeEEEEeCCC
Q 024107 164 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-----E----HPK-LQVEEYPTLLFYPAGD 225 (272)
Q Consensus 164 lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-----~----~~~-~~v~~~P~l~~~~~~~ 225 (272)
++.|+++||++|+.+.+.+.+. .+.+..+|++.. + +.+ .+..++|++ |.+|+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~g~ 82 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL--------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVCGK 82 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred EEEEECCCChhHHHHHHHHHHc--------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 7779999999999999888764 344455565542 2 222 378899998 44664
No 451
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.16 E-value=0.00058 Score=51.54 Aligned_cols=45 Identities=13% Similarity=0.098 Sum_probs=36.6
Q ss_pred CCCcEEEEEE-CCCChhHHH-hHHHHHHHHHHhcCCCce-EEEEEeCCC
Q 024107 159 SHKDVLLEVY-TPWCVTCET-TSKQIEKLAKHFKGLDNL-VIAKIDASA 204 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~-~~~~~~~~a~~~~~~~~v-~~~~id~~~ 204 (272)
.+++++|.|| +.||+.|.. ..|.+.++..+++.. ++ .+..|+.+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK-GVDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT-TCCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 3567888776 999999999 899999999998653 58 888887754
No 452
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.14 E-value=0.00051 Score=51.61 Aligned_cols=42 Identities=19% Similarity=0.336 Sum_probs=36.7
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA 204 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~ 204 (272)
+++++|+|| +.||+.|....+.+.++..++ . ++.+..|+.+.
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~--~v~vv~Is~d~ 85 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S--NTIVLCISADL 85 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T--TEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CCEEEEEeCCC
Confidence 678999998 899999999999999999998 3 68888887754
No 453
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.14 E-value=0.0018 Score=50.76 Aligned_cols=92 Identities=9% Similarity=0.080 Sum_probs=67.0
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc-------------------------chhHHh
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL-------------------------AKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~~-------------------------~~~l~~ 81 (272)
.+++++|.|| +.| ++|....|.|.+++++|.+ .+.|+.|.++.... ...+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 4568999999 999 9999999999999999974 47777777653210 135667
Q ss_pred hcCCC------CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHh
Q 024107 82 LFGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 123 (272)
Q Consensus 82 ~~~i~------~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 123 (272)
.||+. .. |+. .+++.++..++.+.| ..+.+++.+.++...
T Consensus 127 ~ygv~~~~~g~~~-p~~-~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTL-RGL-FIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCccc-ceE-EEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 77774 46 888 778766555554433 257788888888865
No 454
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.13 E-value=0.0015 Score=50.04 Aligned_cols=93 Identities=8% Similarity=-0.036 Sum_probs=65.2
Q ss_pred CCcceEEEEEE-cc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc----------------------chhHHhhcC
Q 024107 30 SPIKLQVYVFA-KA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL----------------------AKPFLTLFG 84 (272)
Q Consensus 30 ~~~~~~v~fy~-~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~~----------------------~~~l~~~~~ 84 (272)
.+++++|.||. .| +.|....|.|.++.+++.+ .+.++.|..+.... ...+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 35688889995 89 9999999999999999874 47787777653211 124555666
Q ss_pred CC------CCCceEEEEEeCCcceeecCCCC----CChHHHHHHHHHHhc
Q 024107 85 LE------ESKNTVVTAFDNKAISKFLLESD----LTPSNIEEFCSRLLH 124 (272)
Q Consensus 85 i~------~~~P~i~~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~ 124 (272)
+. .. |+. .+++.++...+.+.|. .+.+++.+.++....
T Consensus 109 v~~~~~g~~~-p~~-~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 109 NMREDEGLAD-RAT-FVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp CEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred CccCCCCcee-eEE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 65 25 888 7777665555544443 368888888888754
No 455
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.12 E-value=0.00032 Score=47.11 Aligned_cols=53 Identities=19% Similarity=0.331 Sum_probs=38.6
Q ss_pred EEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CC-C----CCcccCCCeEEEEeCCC
Q 024107 163 VLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EH-P----KLQVEEYPTLLFYPAGD 225 (272)
Q Consensus 163 ~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~-~----~~~v~~~P~l~~~~~~~ 225 (272)
.++.|+++||++|+.+.+.+.+. ++.+..+|++.+ .. . .+++.++|++ |.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK--------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT--------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 47789999999999998888764 356777888765 32 1 3478899975 44554
No 456
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.12 E-value=0.00058 Score=51.17 Aligned_cols=45 Identities=20% Similarity=0.203 Sum_probs=36.3
Q ss_pred CCCcEEEEEE-CCCChhHH-HhHHHHHHHHHHhcCCCceE-EEEEeCCC
Q 024107 159 SHKDVLLEVY-TPWCVTCE-TTSKQIEKLAKHFKGLDNLV-IAKIDASA 204 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~-~~~~~~~~~a~~~~~~~~v~-~~~id~~~ 204 (272)
.+++++|.|| +.||+.|. ...+.+.++..+++.. ++. +..|..+.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~-~v~~vv~Is~d~ 81 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK-GVTEILCISVND 81 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT-TCCCEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCC
Confidence 4678999999 89999999 8899999999998643 466 77776643
No 457
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.07 E-value=0.00067 Score=50.78 Aligned_cols=85 Identities=11% Similarity=0.079 Sum_probs=58.5
Q ss_pred CCCcEEEEEEC-CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-------------CCC---C---------Ccc
Q 024107 159 SHKDVLLEVYT-PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-------------EHP---K---------LQV 212 (272)
Q Consensus 159 ~~~~~lv~f~~-~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-------------~~~---~---------~~v 212 (272)
.+++++|+||+ .||+.|....+.+.++.+++ . ++.+..|+.+.. .++ . |++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D--NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCC
Confidence 36789999994 99999999999999999888 3 688888877542 000 1 233
Q ss_pred c----C--CCeEEEEeCCCCcCceEeeC-----CCCHHHHHHHHHH
Q 024107 213 E----E--YPTLLFYPAGDKANPIKVSA-----RSSSKNIAAFIKE 247 (272)
Q Consensus 213 ~----~--~P~l~~~~~~~~~~~~~~~g-----~~~~~~l~~~i~~ 247 (272)
. + .|+.+++..++.+ ...+.| ..+.+.+++.|++
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i-~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTI-RYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBE-EEEEECSBTTSCCCHHHHHHHHHH
T ss_pred ccccCCceEEEEEEEcCCCeE-EEEEecCCcCCCCCHHHHHHHHHh
Confidence 3 2 3899999665554 224444 2345778877764
No 458
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.06 E-value=0.001 Score=53.68 Aligned_cols=93 Identities=10% Similarity=-0.001 Sum_probs=68.0
Q ss_pred CCcc-eEEEEEEcc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcc------------------------cchhHHhh
Q 024107 30 SPIK-LQVYVFAKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADED------------------------LAKPFLTL 82 (272)
Q Consensus 30 ~~~~-~~v~fy~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~------------------------~~~~l~~~ 82 (272)
.++. +++.|+++| +.|....+.+.+++++|.+ .+.++.|+++... ....+++.
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 4544 344678999 9999999999999999985 3888888886420 01468899
Q ss_pred cCCC-------CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHhc
Q 024107 83 FGLE-------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLLH 124 (272)
Q Consensus 83 ~~i~-------~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~~ 124 (272)
||+. +. |++ .+++.++..++.+.| +++.++|.+.+..+..
T Consensus 112 ygv~~~~~g~~~~-p~~-fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 112 LGLLHAESATHTV-RGV-FIVDARGVIRTMLYYPMELGRLVDEILRIVKALKL 162 (249)
T ss_dssp HTCCCTTCSSSCC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred hCCccccCCCccc-ceE-EEECCCCeEEEEEecCCcccchhHHHHHHHHHHHh
Confidence 9997 67 998 788766554443322 3688999999988753
No 459
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.04 E-value=0.0042 Score=47.12 Aligned_cols=40 Identities=20% Similarity=0.370 Sum_probs=33.0
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEe
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKID 201 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id 201 (272)
.++++|.|..-.|++|+.+.+.+..+.+.+.. ++.+..+.
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~--~~~~~~~~ 60 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE--GAKFQKNH 60 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TCEEEEEE
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC--ceEEEEEe
Confidence 56789999999999999999999999999876 45554443
No 460
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.04 E-value=0.0044 Score=46.65 Aligned_cols=93 Identities=5% Similarity=-0.040 Sum_probs=65.2
Q ss_pred CCcceEEEEEEcc-c-chHHHHHHHHHHHHHhc---CceEEEEEeCCCc----------------------------ccc
Q 024107 30 SPIKLQVYVFAKA-D-DLKSLLEPLEDIARNFK---GKIMFTAVDIADE----------------------------DLA 76 (272)
Q Consensus 30 ~~~~~~v~fy~~~-~-~c~~~~~~~~~~a~~~~---~~i~~~~vd~~~~----------------------------~~~ 76 (272)
.+++++|.|+..| + .|....+.+.++.+++. ..+.++.|.++.. +..
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 3678999999999 6 59999999999999995 3477777765410 011
Q ss_pred hhHHhhcCC---------CCCCceEEEEEeCCcceeecCCC-CCChHHHHHHHHHHhc
Q 024107 77 KPFLTLFGL---------EESKNTVVTAFDNKAISKFLLES-DLTPSNIEEFCSRLLH 124 (272)
Q Consensus 77 ~~l~~~~~i---------~~~~P~i~~~~~~~~~~~~~~~g-~~~~~~i~~fi~~~~~ 124 (272)
.++++.||+ .+. |++ .+++.++.....+.| ..+.+++.+.+.+...
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~-~~~-~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHP-NVV-VVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECC-CEE-EEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred HHHHHHCCeEEecCCCccccC-ceE-EEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 346666553 344 777 677766554444445 4789999999998754
No 461
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.04 E-value=0.0056 Score=46.58 Aligned_cols=94 Identities=9% Similarity=0.022 Sum_probs=68.9
Q ss_pred cCCcceEEEEEEcc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCcccc------------hhHHh---hcCCCCCC
Q 024107 29 SSPIKLQVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADEDLA------------KPFLT---LFGLEESK 89 (272)
Q Consensus 29 ~~~~~~~v~fy~~~-~~c~~~~~~~---~~~a~~~~~~i~~~~vd~~~~~~~------------~~l~~---~~~i~~~~ 89 (272)
...|..+|++++++ ..|+.+.... .++.+.++.++.+...|.+..+++ ..++. .+++.++
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~- 131 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQF- 131 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTC-
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCC-
Confidence 35688999999999 9999876433 567777777899999999876321 23444 3899999
Q ss_pred ceEEEEEeCCcc---eeecCCCCCChHHHHHHHHHHhc
Q 024107 90 NTVVTAFDNKAI---SKFLLESDLTPSNIEEFCSRLLH 124 (272)
Q Consensus 90 P~i~~~~~~~~~---~~~~~~g~~~~~~i~~fi~~~~~ 124 (272)
|++ ++....+. ......|..+++++.+.+...+.
T Consensus 132 P~l-~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 132 PLF-LIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp SEE-EEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred CeE-EEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 999 66654321 12345899999999988887654
No 462
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.02 E-value=0.00047 Score=47.51 Aligned_cols=63 Identities=16% Similarity=0.044 Sum_probs=44.8
Q ss_pred ccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc----cchhHHhhcCCCCCCceE
Q 024107 24 SASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED----LAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 24 f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~----~~~~l~~~~~i~~~~P~i 92 (272)
+++.+..+ .++.|+++| ++|+++.+.+.+++..+.+ |..+|.+... ....+.+.+|+.+. |++
T Consensus 5 ~~~~i~~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~v-P~i 72 (105)
T 1kte_A 5 VNSKIQPG--KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTV-PRV 72 (105)
T ss_dssp HHHHCCTT--CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCS-CEE
T ss_pred HHhhcccC--CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCc-CeE
Confidence 34444444 467899999 9999999999987766543 5556665431 11257888999999 999
No 463
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.01 E-value=0.0034 Score=50.31 Aligned_cols=92 Identities=8% Similarity=0.090 Sum_probs=67.4
Q ss_pred CCcceEEEEEE-cc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCccc-------------------------chhHHh
Q 024107 30 SPIKLQVYVFA-KA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDL-------------------------AKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy~-~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~~-------------------------~~~l~~ 81 (272)
.+++++|.||. .| +.|....+.+.+++++|.+ .+.++.|.++.... ...+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 45788999998 99 9999999999999999975 37787777763211 135777
Q ss_pred hcCCC------CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHHh
Q 024107 82 LFGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRLL 123 (272)
Q Consensus 82 ~~~i~------~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 123 (272)
.||+. .. |++ .+++.++...+.+.+ ..+.+++.+.+....
T Consensus 156 ~ygv~~~~~g~~~-p~~-flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq 205 (240)
T 3qpm_A 156 DYGVYLEDQGHTL-RGL-FIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQ 205 (240)
T ss_dssp HTTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCCcc-ceE-EEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 88887 56 998 788766655554322 466788888887753
No 464
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.00 E-value=0.00011 Score=55.51 Aligned_cols=91 Identities=7% Similarity=0.057 Sum_probs=61.6
Q ss_pred cCCCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC----------------------CCccc
Q 024107 158 NSHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP----------------------KLQVE 213 (272)
Q Consensus 158 ~~~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~----------------------~~~v~ 213 (272)
..++++++.|| +.||++|....+.+.++..+++.. .+.+..|+.+.. ... .|++.
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~ 109 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA-NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVY 109 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS-SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc-CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCc
Confidence 35788888888 999999998888888888888765 578888877542 110 12331
Q ss_pred ----------CCCeEEEEeCCCCcCceEee-----CCCCHHHHHHHHHHHcC
Q 024107 214 ----------EYPTLLFYPAGDKANPIKVS-----ARSSSKNIAAFIKEQLK 250 (272)
Q Consensus 214 ----------~~P~l~~~~~~~~~~~~~~~-----g~~~~~~l~~~i~~~~~ 250 (272)
..|+.+++...+.+.. .+. +..+.+.+++.+++..+
T Consensus 110 ~~~~~~~~~~~~p~tflID~~G~I~~-~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 110 HEDLKGLKMVAKRAVFIVKPDGTVAY-KWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EEEETTEEEEECCEEEEECTTSBEEE-EEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred ccccccCcCCeeeEEEEECCCCEEEE-EEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 3688888866555421 222 23567888888877654
No 465
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=96.95 E-value=0.00054 Score=53.24 Aligned_cols=52 Identities=8% Similarity=0.064 Sum_probs=43.2
Q ss_pred ccccccc--cCCcceEEEEEEcc-cchHHHHHHH---HHHHHHhcCceEEEEEeCCCc
Q 024107 22 INSASVH--SSPIKLQVYVFAKA-DDLKSLLEPL---EDIARNFKGKIMFTAVDIADE 73 (272)
Q Consensus 22 ~~f~~~~--~~~~~~~v~fy~~~-~~c~~~~~~~---~~~a~~~~~~i~~~~vd~~~~ 73 (272)
.+|..+. ...++++|.||+.| +||+++.|.| .++++.+.+++.|..++....
T Consensus 102 ~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 102 KQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 3454443 23568899999999 9999999999 999999998899999999765
No 466
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=96.95 E-value=0.00071 Score=50.41 Aligned_cols=90 Identities=8% Similarity=0.126 Sum_probs=53.4
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcC-ceEEEEEeCCCcccc------------------hhHHhhcCCC--
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKG-KIMFTAVDIADEDLA------------------KPFLTLFGLE-- 86 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~-~i~~~~vd~~~~~~~------------------~~l~~~~~i~-- 86 (272)
+++++++.|| +.| ++|....|.+.++.+++.+ .+.++.|+.+..... .++++.||+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 4567888998 899 9999999999999988875 377777776643221 2345555553
Q ss_pred ---------CCCceEEEEEeCCcceeecC-----CCCCChHHHHHHHHH
Q 024107 87 ---------ESKNTVVTAFDNKAISKFLL-----ESDLTPSNIEEFCSR 121 (272)
Q Consensus 87 ---------~~~P~i~~~~~~~~~~~~~~-----~g~~~~~~i~~fi~~ 121 (272)
.. |+. .+.+.++..+|.+ .+..+.+++.+.++.
T Consensus 109 ~~~~~~~~~~~-p~t-flID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 109 FPALPGYVLAK-RAV-FVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp CTTSTTCEEEC-EEE-EEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred cccCCCcceee-eeE-EEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 23 555 5666555444432 344567777777754
No 467
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.91 E-value=0.0012 Score=52.74 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=38.0
Q ss_pred CCCcEEEEEE-CCCChhHH-HhHHHHHHHHHHhcCCCce-EEEEEeCCC
Q 024107 159 SHKDVLLEVY-TPWCVTCE-TTSKQIEKLAKHFKGLDNL-VIAKIDASA 204 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~-~~~~~~~~~a~~~~~~~~v-~~~~id~~~ 204 (272)
.+++++|+|| +.||+.|. ...|.+.++..+++.. ++ .+..|+.+.
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~-~~~~vv~is~d~ 79 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY-GVDDILVVSVND 79 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT-TCCEEEEEESSC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEcCC
Confidence 4678999998 99999999 8999999999998754 58 888887754
No 468
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.89 E-value=0.0014 Score=50.27 Aligned_cols=44 Identities=18% Similarity=0.147 Sum_probs=34.4
Q ss_pred CCc-EEEEEECCCChhHHH-hHHHHHHHHHHhcCCCceE-EEEEeCCC
Q 024107 160 HKD-VLLEVYTPWCVTCET-TSKQIEKLAKHFKGLDNLV-IAKIDASA 204 (272)
Q Consensus 160 ~~~-~lv~f~~~~C~~c~~-~~~~~~~~a~~~~~~~~v~-~~~id~~~ 204 (272)
+++ ++++|++.||+.|.. -.|.+.+++.+|+.. .+. +..|+.+.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 102 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR-GVDDIAVVAVND 102 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 454 455566999999999 699999999999764 466 77777754
No 469
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.87 E-value=0.0006 Score=52.58 Aligned_cols=43 Identities=14% Similarity=0.328 Sum_probs=35.8
Q ss_pred CCcEEEEEECCCChhHHHhHHHH---HHHHHHhcCCCceEEEEEeCCC
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQI---EKLAKHFKGLDNLVIAKIDASA 204 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~id~~~ 204 (272)
.++++|.|++.||++|+.+.+.+ ..+.+.+.+ +++|..++..-
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ--GSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT--TCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC--CCEEEEEechh
Confidence 35789999999999999999986 677777776 68888888765
No 470
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.86 E-value=0.00055 Score=51.86 Aligned_cols=43 Identities=12% Similarity=0.202 Sum_probs=35.0
Q ss_pred CcEEEEEECCCChhHHHh-HHHHHHHHHHhcCCCceE-EEEEeCCC
Q 024107 161 KDVLLEVYTPWCVTCETT-SKQIEKLAKHFKGLDNLV-IAKIDASA 204 (272)
Q Consensus 161 ~~~lv~f~~~~C~~c~~~-~~~~~~~a~~~~~~~~v~-~~~id~~~ 204 (272)
+.++++|++.||++|... .|.+.++..+++.. ++. +..|+.+.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~-g~~~vv~Is~d~ 89 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK-GVDSVICVAIND 89 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT-TCSEEEEEESSC
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 467788999999999998 99999999998754 466 77777654
No 471
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.85 E-value=0.00093 Score=50.11 Aligned_cols=61 Identities=11% Similarity=0.137 Sum_probs=45.3
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
.+++++|.|| +.| ++|....|.+.++.+++ ..+.++.|..+......++++++++..+ |.+
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~-~~l 104 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENA-KTV 104 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTE-EEE
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCce-EEe
Confidence 4567888898 889 99999999999999999 5689999988754222345566666445 544
No 472
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.83 E-value=0.0013 Score=49.55 Aligned_cols=61 Identities=10% Similarity=0.100 Sum_probs=47.9
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
.+++++|.|| +.| +.|....+.+.++.+++ ..+.++.|.++......++++++++..+ |.+
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~-~~l 108 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNV-TVA 108 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSS-EEE
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCe-EEe
Confidence 3567888898 799 99999999999999999 6689998888754322457788887556 654
No 473
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.82 E-value=0.0013 Score=49.23 Aligned_cols=61 Identities=10% Similarity=0.024 Sum_probs=47.9
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
.+++++|.|| +.| ++|....+.+.++.+++ ..+.+..|..+......++++++|+..+ |.+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~-~~l 103 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNA-IML 103 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTS-EEE
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCc-EEe
Confidence 4568889998 489 99999999999999999 5689999988754322457788887556 755
No 474
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.80 E-value=0.0011 Score=46.13 Aligned_cols=63 Identities=17% Similarity=0.244 Sum_probs=42.8
Q ss_pred cchhHHhhcCCCcEEEEEEC-----CCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC-----CCcccCCCeE
Q 024107 150 KTFDDLVLNSHKDVLLEVYT-----PWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP-----KLQVEEYPTL 218 (272)
Q Consensus 150 ~~~~~~v~~~~~~~lv~f~~-----~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~-----~~~v~~~P~l 218 (272)
+.+.+.+ . ... ++.|+. +||++|+.+...+... ++.+..+|++.+ +.. ..+..++|.+
T Consensus 6 ~~~~~~i-~-~~~-vvvy~~g~~~~~~Cp~C~~ak~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 6 SGLKVLT-N-KAS-VMLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp CCHHHHH-T-TSS-EEEEESSTTTCCCSSTHHHHHHHHHHT--------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHh-c-cCC-EEEEEecCCCCCCCchHHHHHHHHHHc--------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 4566665 2 233 445666 9999999999888765 467888888876 322 2367788975
Q ss_pred EEEeCCC
Q 024107 219 LFYPAGD 225 (272)
Q Consensus 219 ~~~~~~~ 225 (272)
|.+|+
T Consensus 75 --fi~g~ 79 (109)
T 1wik_A 75 --YVRGD 79 (109)
T ss_dssp --ECSSS
T ss_pred --EECCE
Confidence 55665
No 475
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.77 E-value=0.0014 Score=50.96 Aligned_cols=43 Identities=19% Similarity=0.332 Sum_probs=37.3
Q ss_pred CCCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC
Q 024107 159 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA 204 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~ 204 (272)
.+++++|+|| +.||+.|....+.+.++.+++ . ++.+..|..+.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~--~v~vv~Is~D~ 120 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E--NTVVLCISSDL 120 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T--TEEEEEEESSC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C--CCEEEEEECCC
Confidence 3678999998 789999999999999999999 3 68888888765
No 476
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.77 E-value=0.0045 Score=50.05 Aligned_cols=91 Identities=9% Similarity=0.076 Sum_probs=65.8
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc-------------------------chhHHh
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL-------------------------AKPFLT 81 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~-------------------------~~~l~~ 81 (272)
.+++++|.|| +.| +.|....+.|.+++++|.+. +.++.|.++.... ...+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 4567888898 999 99999999999999999753 7777777763210 135677
Q ss_pred hcCCC------CCCceEEEEEeCCcceeecCCC----CCChHHHHHHHHHH
Q 024107 82 LFGLE------ESKNTVVTAFDNKAISKFLLES----DLTPSNIEEFCSRL 122 (272)
Q Consensus 82 ~~~i~------~~~P~i~~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~ 122 (272)
.||+. .. |++ .+++.++..++.+.+ .++.+++.+.+...
T Consensus 170 ~ygv~~~~~g~~~-p~t-flID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTL-RGL-FIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEEC-EEE-EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCcc-ceE-EEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 78875 45 888 777766555554322 46778888888765
No 477
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.74 E-value=0.0046 Score=46.25 Aligned_cols=54 Identities=11% Similarity=-0.002 Sum_probs=38.6
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCC
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGL 85 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i 85 (272)
.+++++|.|| +.| ++|....+.+.++.++ . .+.++.|..+......++++++++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~-~~~vv~is~d~~~~~~~~~~~~~~ 100 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E-EGIVLTISADLPFAQKRWCASAGL 100 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T-TSEEEEEESSCHHHHHHHHHHHTC
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C-CCEEEEEECCCHHHHHHHHHHcCC
Confidence 4567888888 789 9999999999999888 4 477777777643222344555554
No 478
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.72 E-value=0.0028 Score=41.10 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=48.4
Q ss_pred EEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceEEEEEeCCcceeecCCCCCChH
Q 024107 35 QVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTVVTAFDNKAISKFLLESDLTPS 113 (272)
Q Consensus 35 ~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i~~~~~~~~~~~~~~~g~~~~~ 113 (272)
++.|+++| ++|+++.+.+.+. .+.|..+|.+......+...++|+.+. |++ .+ + + ... +..+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~v-P~~-~~-~-g--~~~---~g~~~~ 67 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQL-PVV-IA-G-D--LSW---SGFRPD 67 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSS-CEE-EE-T-T--EEE---ESCCHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCcc-CEE-EE-C-C--EEE---ecCCHH
Confidence 57899999 9999999998863 277888999876211223345899999 999 43 3 2 222 335666
Q ss_pred HHHHHHHH
Q 024107 114 NIEEFCSR 121 (272)
Q Consensus 114 ~i~~fi~~ 121 (272)
.|.+++.+
T Consensus 68 ~l~~~l~~ 75 (81)
T 1h75_A 68 MINRLHPA 75 (81)
T ss_dssp HHGGGSCC
T ss_pred HHHHHHhc
Confidence 66665544
No 479
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=96.69 E-value=0.00032 Score=52.38 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=31.8
Q ss_pred CCCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCC
Q 024107 159 SHKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASA 204 (272)
Q Consensus 159 ~~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~ 204 (272)
.++.++|.|| +.||++|....+.+.++..+++.. .+.+..|+.+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~-~~~~v~vs~d~ 74 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV-NAVVLGISVDP 74 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGC-SSEEEEEESSC
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccccccc-CceEeeecccc
Confidence 3678999998 999999999999999888888765 57787787754
No 480
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=96.64 E-value=0.00043 Score=52.10 Aligned_cols=96 Identities=8% Similarity=0.058 Sum_probs=64.2
Q ss_pred ccccCCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCc-eEEEEEeCCCccc------------------chhHHhhcC
Q 024107 26 SVHSSPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGK-IMFTAVDIADEDL------------------AKPFLTLFG 84 (272)
Q Consensus 26 ~~~~~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~-i~~~~vd~~~~~~------------------~~~l~~~~~ 84 (272)
++..+++++++.|| +.| ++|..-.+.+.++.+++.+. +.++.|+.+.... ..++++.||
T Consensus 28 d~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~yg 107 (164)
T 4gqc_A 28 EVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYN 107 (164)
T ss_dssp HHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTT
T ss_pred HHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcC
Confidence 34457788899998 999 99998888888888888753 7777777654322 124556666
Q ss_pred CC----------CCCceEEEEEeCCcceeecC-----CCCCChHHHHHHHHHHh
Q 024107 85 LE----------ESKNTVVTAFDNKAISKFLL-----ESDLTPSNIEEFCSRLL 123 (272)
Q Consensus 85 i~----------~~~P~i~~~~~~~~~~~~~~-----~g~~~~~~i~~fi~~~~ 123 (272)
+. .. |+. .+.+.++..+|.+ .+..+.+++.+-+++..
T Consensus 108 v~~~~~~~~~~~~~-p~t-flID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 108 VYHEDLKGLKMVAK-RAV-FIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp CEEEEETTEEEEEC-CEE-EEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred CcccccccCcCCee-eEE-EEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 53 23 666 5666665455443 23457788888777753
No 481
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.56 E-value=0.002 Score=45.18 Aligned_cols=52 Identities=6% Similarity=0.151 Sum_probs=35.9
Q ss_pred EEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-C-------CC-CCcccCCCeEEEEeCCC
Q 024107 164 LLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-E-------HP-KLQVEEYPTLLFYPAGD 225 (272)
Q Consensus 164 lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~-------~~-~~~v~~~P~l~~~~~~~ 225 (272)
++.|+++||++|..++..+.+. ++.+..+|++.. + +. ..+..++|++++ +|+
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~--------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~g~ 79 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL--------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--NKV 79 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--TTE
T ss_pred EEEEEcCCCCcHHHHHHHHHHc--------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--CCE
Confidence 5559999999999999888775 345566666643 1 11 236788899855 554
No 482
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.55 E-value=0.0029 Score=47.64 Aligned_cols=62 Identities=10% Similarity=0.147 Sum_probs=47.5
Q ss_pred CCcceEEEEE-Ecc-cchHH-HHHHHHHHHHHhcC-ce-EEEEEeCCCcccchhHHhhcCCC-CCCceE
Q 024107 30 SPIKLQVYVF-AKA-DDLKS-LLEPLEDIARNFKG-KI-MFTAVDIADEDLAKPFLTLFGLE-ESKNTV 92 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~-~~~~~~~~a~~~~~-~i-~~~~vd~~~~~~~~~l~~~~~i~-~~~P~i 92 (272)
++++++|.|| +.| +.|.. -.|.|.++++++.+ .+ .++.|+.+.......+++++++. .+ |.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~f-p~l 97 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKV-QML 97 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTS-EEE
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcce-EEE
Confidence 4567888887 999 99999 99999999999864 38 88888887542225678888876 36 654
No 483
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.55 E-value=0.0014 Score=46.04 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=44.6
Q ss_pred ccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcc----cchhHHhhcCCCCCCceE
Q 024107 24 SASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADED----LAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 24 f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~----~~~~l~~~~~i~~~~P~i 92 (272)
+...+... .++.|+++| ++|+++.+.+.+++... +. |..+|++... ....+.+.+|+.+. |++
T Consensus 12 ~~~~i~~~--~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~v-P~v 79 (114)
T 2hze_A 12 VQQRLANN--KVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTV-PRI 79 (114)
T ss_dssp HHTTCCTT--CEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSS-CEE
T ss_pred HHHHhccC--CEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCc-CEE
Confidence 33444433 577899999 99999999987754332 22 7778887651 01268889999999 998
No 484
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.51 E-value=0.002 Score=50.07 Aligned_cols=61 Identities=10% Similarity=0.082 Sum_probs=45.6
Q ss_pred CCcceEEEEE-Ecc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhcCCCCCCceE
Q 024107 30 SPIKLQVYVF-AKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLFGLEESKNTV 92 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~~i~~~~P~i 92 (272)
.+++++|.|| +.| +.|....+.+.++++++ ..+.++.|.++......++++++++..+ |.+
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f-~~l 139 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNV-ITL 139 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTE-EEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCc-eEE
Confidence 4568888998 779 99999999999999999 4588988888754222345666666555 533
No 485
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.50 E-value=0.0031 Score=47.78 Aligned_cols=45 Identities=13% Similarity=0.127 Sum_probs=32.4
Q ss_pred CCCcEEEEE-ECCCChhHH-HhHHHHHHHHHHhcCCCceEEEE-EeCCC
Q 024107 159 SHKDVLLEV-YTPWCVTCE-TTSKQIEKLAKHFKGLDNLVIAK-IDASA 204 (272)
Q Consensus 159 ~~~~~lv~f-~~~~C~~c~-~~~~~~~~~a~~~~~~~~v~~~~-id~~~ 204 (272)
.+++++|+| ++.||+.|. .-.+.+.+++.+|+.. .+.+.. +..+.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~-gv~vv~~iS~D~ 89 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK-GVQVVACLSVND 89 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEEcCCC
Confidence 355555555 599999999 4889999999999765 355553 65544
No 486
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=96.45 E-value=0.035 Score=41.82 Aligned_cols=40 Identities=5% Similarity=0.064 Sum_probs=32.8
Q ss_pred CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeC
Q 024107 31 PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI 70 (272)
Q Consensus 31 ~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~ 70 (272)
.++.+|.|++-. ++|+++.+.+.++.+.+.+.+.|..+..
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~ 61 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHV 61 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEec
Confidence 356788899888 9999999999999999987666665543
No 487
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.44 E-value=0.0031 Score=47.21 Aligned_cols=83 Identities=16% Similarity=0.115 Sum_probs=55.9
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC-CCC------------------------CCccc
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN-EHP------------------------KLQVE 213 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~-~~~------------------------~~~v~ 213 (272)
+++++|+|| +.||+.|....+.+.++..+ . ++.+..|..+.. ... .|++.
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~---~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~ 121 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK-E---EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVV 121 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T---TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCE
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc-C---CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCc
Confidence 678899998 78999999999999888776 2 578888877542 110 12344
Q ss_pred C------CCeEEEEeCCCCcCceEee-----CCCCHHHHHHHHHH
Q 024107 214 E------YPTLLFYPAGDKANPIKVS-----ARSSSKNIAAFIKE 247 (272)
Q Consensus 214 ~------~P~l~~~~~~~~~~~~~~~-----g~~~~~~l~~~i~~ 247 (272)
. .|+.+++...+.+.. ++. +..+.+.+++.|++
T Consensus 122 ~~~~g~~~p~~~liD~~G~i~~-~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 122 MEELRLLARAVFVLDADNKVVY-KEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ETTTTEECCEEEEECTTCBEEE-EEECSBTTSCCCHHHHHHHHHT
T ss_pred cccCCceeeEEEEECCCCeEEE-EEEcCCcccCCCHHHHHHHHhc
Confidence 3 799999966555422 222 23556788777754
No 488
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.36 E-value=0.0079 Score=46.17 Aligned_cols=40 Identities=5% Similarity=-0.027 Sum_probs=34.2
Q ss_pred CcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeC
Q 024107 31 PIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDI 70 (272)
Q Consensus 31 ~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~ 70 (272)
.+..++.|++.+ ++|..+.+.+.++.+.+.+++.|..+..
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 456788999999 9999999999999999987777776654
No 489
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.35 E-value=0.022 Score=38.12 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=51.8
Q ss_pred eEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccchhHHhhc--CCCCCCceEEEEEeCCcceeecCCCCC
Q 024107 34 LQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAKPFLTLF--GLEESKNTVVTAFDNKAISKFLLESDL 110 (272)
Q Consensus 34 ~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~~l~~~~--~i~~~~P~i~~~~~~~~~~~~~~~g~~ 110 (272)
.++.|..+| +.|.++...|.+. .+.|..+|.+......+...+. |.... |+| .+ ..+ ... ++.
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~------gi~y~~idi~~d~~~~~~~~~~~~G~~tV-P~I-~i-~Dg--~~l---~~~ 70 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN------RIAYDEVDIEHNRAAAEFVGSVNGGNRTV-PTV-KF-ADG--STL---TNP 70 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHHSSSSSCS-CEE-EE-TTS--CEE---ESC
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc------CCceEEEEcCCCHHHHHHHHHHcCCCCEe-CEE-EE-eCC--EEE---eCC
Confidence 467788889 9999998888763 3778889998762212222222 66677 999 44 322 222 246
Q ss_pred ChHHHHHHHHHHhc
Q 024107 111 TPSNIEEFCSRLLH 124 (272)
Q Consensus 111 ~~~~i~~fi~~~~~ 124 (272)
+.++|.+++.+..+
T Consensus 71 ~~~el~~~L~el~g 84 (92)
T 2lqo_A 71 SADEVKAKLVKIAG 84 (92)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcC
Confidence 88899999998753
No 490
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.35 E-value=0.0047 Score=47.30 Aligned_cols=62 Identities=8% Similarity=0.051 Sum_probs=45.7
Q ss_pred CCcceEEEEE-Ecc-cchHH-HHHHHHHHHHHhcCc-eE-EEEEeCCCcccchhHHhhcCCC-CCCceE
Q 024107 30 SPIKLQVYVF-AKA-DDLKS-LLEPLEDIARNFKGK-IM-FTAVDIADEDLAKPFLTLFGLE-ESKNTV 92 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~~-~~~~~~~~a~~~~~~-i~-~~~vd~~~~~~~~~l~~~~~i~-~~~P~i 92 (272)
+++++++.|| +.| +.|.. -.|.|.+++++|+++ +. ++.|+.+.......+++++++. .+ |.+
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~f-p~l 122 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKI-HFL 122 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTS-EEE
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCce-EEE
Confidence 3456666665 999 99999 699999999999753 77 8888887543335677888876 45 654
No 491
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.33 E-value=0.0035 Score=46.77 Aligned_cols=62 Identities=8% Similarity=0.108 Sum_probs=46.0
Q ss_pred CCcceEEEEE-Ecc-cchH-HHHHHHHHHHHHhcC-ceE-EEEEeCCCcccchhHHhhcCCC-CCCceE
Q 024107 30 SPIKLQVYVF-AKA-DDLK-SLLEPLEDIARNFKG-KIM-FTAVDIADEDLAKPFLTLFGLE-ESKNTV 92 (272)
Q Consensus 30 ~~~~~~v~fy-~~~-~~c~-~~~~~~~~~a~~~~~-~i~-~~~vd~~~~~~~~~l~~~~~i~-~~~P~i 92 (272)
++++++|.|| +.| ++|. .-.|.+.++++++.+ .+. ++.|..+......++++++++. .+ |.+
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~-~~l 101 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHV-KFL 101 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSE-EEE
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCe-EEE
Confidence 4568888999 899 9999 899999999999863 477 7777776432224677777775 35 544
No 492
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.29 E-value=0.0052 Score=48.96 Aligned_cols=88 Identities=13% Similarity=0.109 Sum_probs=61.7
Q ss_pred CCcEEEEEE-CCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCC--------------------CCC----------
Q 024107 160 HKDVLLEVY-TPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASAN--------------------EHP---------- 208 (272)
Q Consensus 160 ~~~~lv~f~-~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~--------------------~~~---------- 208 (272)
++.++++|| +.||+.|....+.+.++..+|+.. ++.++.|.++.. .++
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~-~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va 107 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR-GVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA 107 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH
Confidence 347888898 899999999999999999999754 588888877542 111
Q ss_pred -CCccc------------CCCeEEEEeCCCCcCceEeeC----CCCHHHHHHHHHHHc
Q 024107 209 -KLQVE------------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 249 (272)
Q Consensus 209 -~~~v~------------~~P~l~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~~ 249 (272)
.|++. .+|+++++...+.+. ..+.+ ..+.+.+++.|+...
T Consensus 108 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~-~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 108 VKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLK-LSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HHTTCEEEEEECTTCCEEECEEEEEECTTSBEE-EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCcCcccccCCCcccccceEEEECCCCEEE-EEEecCCCCCCCHHHHHHHHHHHH
Confidence 12332 478999997666552 23332 357888888888643
No 493
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.28 E-value=0.0048 Score=40.89 Aligned_cols=49 Identities=10% Similarity=0.085 Sum_probs=40.5
Q ss_pred eEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCC--CcccchhHHhhc-CCCCCCceE
Q 024107 34 LQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIA--DEDLAKPFLTLF-GLEESKNTV 92 (272)
Q Consensus 34 ~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~--~~~~~~~l~~~~-~i~~~~P~i 92 (272)
.++.|+++| ++|+++.+.+.+.+ +.|..+|.+ .. ..+.+.+ |+.+. |++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~~~~~---~~l~~~~~~~~~v-P~l 59 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDASTSLR---QEMVQRANGRNTF-PQI 59 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSCHHHH---HHHHHHHHSSCCS-CEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECCHHHH---HHHHHHhCCCCCc-CEE
Confidence 467888999 99999999988753 567788887 44 6788889 99999 999
No 494
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.27 E-value=0.0046 Score=42.57 Aligned_cols=60 Identities=10% Similarity=0.139 Sum_probs=42.4
Q ss_pred ccccccCCcceEEEEEE-----cc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCccc-chhHHhhcCCCCCCceE
Q 024107 24 SASVHSSPIKLQVYVFA-----KA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDL-AKPFLTLFGLEESKNTV 92 (272)
Q Consensus 24 f~~~~~~~~~~~v~fy~-----~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~-~~~l~~~~~i~~~~P~i 92 (272)
+.+++..+ + ++.|+. +| ++|+++.+.+.++. +.|..+|.+.... ...+.+.+|..+. |++
T Consensus 10 ~~~~i~~~-~-vvvf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g~~~v-P~v 76 (105)
T 2yan_A 10 LKVLTNKA-S-VMLFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSNWPTY-PQL 76 (105)
T ss_dssp HHHHHTSS-S-EEEEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHTCCSS-CEE
T ss_pred HHHHhccC-C-EEEEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHCCCCC-CeE
Confidence 44455544 3 555777 99 99999999998863 6788888886611 1125666898898 999
No 495
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.27 E-value=0.0012 Score=47.61 Aligned_cols=55 Identities=15% Similarity=0.256 Sum_probs=35.4
Q ss_pred EEEEECCCChhHHHh-HHHHHHHHHHhcCCCceEEEEEeCCCC--------CCC-CCcccCCCeEEEEeCCC
Q 024107 164 LLEVYTPWCVTCETT-SKQIEKLAKHFKGLDNLVIAKIDASAN--------EHP-KLQVEEYPTLLFYPAGD 225 (272)
Q Consensus 164 lv~f~~~~C~~c~~~-~~~~~~~a~~~~~~~~v~~~~id~~~~--------~~~-~~~v~~~P~l~~~~~~~ 225 (272)
++.|+.+||++|+.+ .+.+...... .+.+..+|++.. ++. .++..++|++ |.+|+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~-----~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi~g~ 103 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVP-----KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YINGK 103 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCC-----GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCcc-----CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EECCE
Confidence 678999999999988 7777654311 144445555443 122 3478899996 55654
No 496
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.23 E-value=0.013 Score=44.04 Aligned_cols=42 Identities=14% Similarity=0.114 Sum_probs=35.2
Q ss_pred CCcEEEEEECCCChhHHHhHHHHHHHHHHh--cCCCceEEEEEeCC
Q 024107 160 HKDVLLEVYTPWCVTCETTSKQIEKLAKHF--KGLDNLVIAKIDAS 203 (272)
Q Consensus 160 ~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~--~~~~~v~~~~id~~ 203 (272)
.+..++.|+..+|++|+.+.+.+..+.+++ .+ ++.+...+..
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~--~v~~~~~~~~ 70 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSG--KVERIIKLFD 70 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC--cEEEEEEeCC
Confidence 456799999999999999999999998888 54 6887777654
No 497
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=96.23 E-value=0.0089 Score=47.27 Aligned_cols=86 Identities=15% Similarity=0.215 Sum_probs=60.0
Q ss_pred cEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCCCCC----------------------CC-----------
Q 024107 162 DVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDASANE----------------------HP----------- 208 (272)
Q Consensus 162 ~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~~~~----------------------~~----------- 208 (272)
.+|++|++.||+.|....+.+.++..+|+.. ++.+..|.++..+ ++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR-NVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAI 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHH
Confidence 4555668999999999999999999999764 5888888775421 00
Q ss_pred CCccc------------CCCeEEEEeCCCCcCceEeeC----CCCHHHHHHHHHHHc
Q 024107 209 KLQVE------------EYPTLLFYPAGDKANPIKVSA----RSSSKNIAAFIKEQL 249 (272)
Q Consensus 209 ~~~v~------------~~P~l~~~~~~~~~~~~~~~g----~~~~~~l~~~i~~~~ 249 (272)
.|++. .+|+++++..++.+. ..+.+ ..+.+.+++.|+...
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~-~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLK-LSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEE-EEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEE-EEEecCCCCCCCHHHHHHHHHHHH
Confidence 12332 369999997666552 23433 357888988887654
No 498
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.13 E-value=0.043 Score=41.14 Aligned_cols=39 Identities=10% Similarity=-0.010 Sum_probs=31.6
Q ss_pred cceEEEEEEcc-cchHHHHHHHHHHHHHh--cCceEEEEEeC
Q 024107 32 IKLQVYVFAKA-DDLKSLLEPLEDIARNF--KGKIMFTAVDI 70 (272)
Q Consensus 32 ~~~~v~fy~~~-~~c~~~~~~~~~~a~~~--~~~i~~~~vd~ 70 (272)
+..++.|+..+ ++|..+.+.+.++.+++ .+++.|...+.
T Consensus 28 ~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 28 PVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 44677788888 99999999999999998 67777776554
No 499
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.12 E-value=0.0097 Score=42.69 Aligned_cols=60 Identities=8% Similarity=0.088 Sum_probs=41.8
Q ss_pred ccccccCCcceEEEEEEcc-cchHHHHHHHHHHHHHhcCceEEEEEeCCCcccch----hHHhhcCCCCCCceE
Q 024107 24 SASVHSSPIKLQVYVFAKA-DDLKSLLEPLEDIARNFKGKIMFTAVDIADEDLAK----PFLTLFGLEESKNTV 92 (272)
Q Consensus 24 f~~~~~~~~~~~v~fy~~~-~~c~~~~~~~~~~a~~~~~~i~~~~vd~~~~~~~~----~l~~~~~i~~~~P~i 92 (272)
+.+.+..+ .++.|+++| ++|+++.+.+.++. +.|..+|++.....+ .+.+.+|+.+. |++
T Consensus 20 ~~~~i~~~--~vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~v-P~l 84 (130)
T 2cq9_A 20 IQETISDN--CVVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTV-PRI 84 (130)
T ss_dssp HHHHHHHS--SEEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCS-SEE
T ss_pred HHHHHcCC--cEEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCc-CEE
Confidence 33444443 355699999 99999999998874 445666666431102 37889999999 999
No 500
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.12 E-value=0.0048 Score=47.41 Aligned_cols=43 Identities=23% Similarity=0.354 Sum_probs=37.0
Q ss_pred CCCcEEEEEECCCChhHHHhHHHHHHHHHHhcCCCceEEEEEeCC
Q 024107 159 SHKDVLLEVYTPWCVTCETTSKQIEKLAKHFKGLDNLVIAKIDAS 203 (272)
Q Consensus 159 ~~~~~lv~f~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~id~~ 203 (272)
+.+..++.|+++||++|..+.+.+.++.+.+.. ++.+..+...
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEeccc
Confidence 356789999999999999999999999999876 6888877763
Done!