BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024108
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543308|ref|XP_002512717.1| 40S ribosomal protein S4, putative [Ricinus communis]
gi|223548678|gb|EEF50169.1| 40S ribosomal protein S4, putative [Ricinus communis]
Length = 263
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/270 (92%), Positives = 259/270 (95%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRD+EAK
Sbjct: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKITEFI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRMGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLPKGKGIKLSIIEEARKR A + +AA
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKRLAASQTAA 263
>gi|255549228|ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus communis]
gi|223545211|gb|EEF46720.1| 40S ribosomal protein S4, putative [Ricinus communis]
Length = 263
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/270 (92%), Positives = 258/270 (95%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRD+EAK
Sbjct: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLPKGKGIKLSIIEEARKR A A + A
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKRLAAAQAVA 263
>gi|449509213|ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/271 (91%), Positives = 257/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKL+IIEEARKR A ++ A
Sbjct: 234 PWVSLPKGKGIKLTIIEEARKRLASQSAVTA 264
>gi|357468567|ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355505623|gb|AES86765.1| 40S ribosomal protein S4 [Medicago truncatula]
Length = 264
Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/271 (91%), Positives = 256/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKL++IEEARKRQA AA
Sbjct: 234 PWVSLPKGKGIKLTVIEEARKRQAAQNVTAA 264
>gi|224087813|ref|XP_002308235.1| predicted protein [Populus trichocarpa]
gi|222854211|gb|EEE91758.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/270 (90%), Positives = 258/270 (95%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+K
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLPKGKGIKLSIIEEARKRQA + +AA
Sbjct: 234 PWISLPKGKGIKLSIIEEARKRQAASQTAA 263
>gi|449465358|ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
gi|449496881|ref|XP_004160252.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/271 (91%), Positives = 255/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FI
Sbjct: 121 -------YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKLSIIEEARKR A + A
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKRLASQATVTA 264
>gi|192912988|gb|ACF06602.1| 40S ribosomal protein S4 [Elaeis guineensis]
Length = 265
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/270 (91%), Positives = 257/270 (95%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHV+VD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61 VIAILMQRHVMVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NT+DGRTIRYPDPLIKANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLEANKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDALGHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHLQDALGHEFATRIGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLPKGKGIKLSIIEEARKR A + +AA
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKRLAASGAAA 263
>gi|356496247|ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Glycine max]
Length = 264
Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/271 (90%), Positives = 254/271 (93%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVF IGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKLSIIEEARKR A A
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKRLAAQNETVA 264
>gi|356559288|ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
Length = 264
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/271 (90%), Positives = 255/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PW+SLPKGKGIKLSIIEEARKR A + AA
Sbjct: 234 PWISLPKGKGIKLSIIEEARKRIAAQQATAA 264
>gi|192912992|gb|ACF06604.1| 40S ribosomal protein S4 [Elaeis guineensis]
Length = 265
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/271 (91%), Positives = 255/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFG KGIPY+NTYDGRTIRYPDPLIKANDTIKLDLET KI +FI
Sbjct: 121 -------FKLCKVRSVQFGHKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETYKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHLQDATGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKLSIIEEARKR A + +AA
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKRLAASGAAAT 264
>gi|449465362|ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
gi|449496878|ref|XP_004160251.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/270 (91%), Positives = 257/270 (95%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FI
Sbjct: 121 -------YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFT+GKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLPKGKGIKLSIIEEARKR LA+ AA
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKR--LASQAA 261
>gi|225448546|ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/271 (90%), Positives = 256/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRH+ VD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHIFVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIHIQDA GHEFATRLGNVF IGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKLSIIEEA+KR A +++A
Sbjct: 234 PWVSLPKGKGIKLSIIEEAKKRLAAQAASSA 264
>gi|351725821|ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max]
gi|22138108|gb|AAM93434.1| 40S ribosomal S4 protein [Glycine max]
gi|255641970|gb|ACU21252.1| unknown [Glycine max]
Length = 264
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/271 (90%), Positives = 255/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QD+ GHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PW+SLPKGKGIKLSIIEEARKR A + AA
Sbjct: 234 PWISLPKGKGIKLSIIEEARKRIAAQQATAA 264
>gi|225434482|ref|XP_002275063.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/271 (90%), Positives = 256/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREK KGSFETIH+QDA GHEFATRLGNVF IGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWV+LPKGKGIKLSIIEEA+KR A +++A
Sbjct: 234 PWVTLPKGKGIKLSIIEEAQKRLAAQAASSA 264
>gi|73759787|dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]
Length = 264
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/271 (90%), Positives = 253/271 (93%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIADFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKGSFET+HIQD+LGHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETVHIQDSLGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKL+IIEEARKR ++ A
Sbjct: 234 PWVSLPKGKGIKLTIIEEARKRNVAQSATTA 264
>gi|356551387|ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
Length = 264
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/271 (90%), Positives = 254/271 (93%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDT+KLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PW+SLPKGKGIKLSIIEEARKR A + A
Sbjct: 234 PWISLPKGKGIKLSIIEEARKRIAAQQATTA 264
>gi|224125756|ref|XP_002329710.1| predicted protein [Populus trichocarpa]
gi|222870618|gb|EEF07749.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/270 (90%), Positives = 255/270 (94%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLPKGKGIKLSIIEEARKR A + + A
Sbjct: 234 PWISLPKGKGIKLSIIEEARKRLAASQATA 263
>gi|225439460|ref|XP_002268192.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/271 (89%), Positives = 255/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV+ VQFGQKGIPY+NTYDGRTIRYPDPLIKANDT+KLDLE+NKI +FI
Sbjct: 121 -------FKLCKVKGVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTVKLDLESNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IK+REKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKSREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWV+LPKGKGIKLSIIEEA+KR A SA A
Sbjct: 234 PWVTLPKGKGIKLSIIEEAKKRLAAQASATA 264
>gi|255647667|gb|ACU24295.1| unknown [Glycine max]
Length = 264
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/271 (89%), Positives = 254/271 (93%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKK+LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKYLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDT+KLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PW+SLPKGKGIKLSIIEEARKR A + A
Sbjct: 234 PWISLPKGKGIKLSIIEEARKRIAAQQATTA 264
>gi|255648349|gb|ACU24626.1| unknown [Glycine max]
Length = 264
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/271 (89%), Positives = 253/271 (93%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMD VSIPKTNENF LLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDAVSIPKTNENFHLLYDTKGRFRLHSVRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PW+SLPKGKGIKLSIIEEARKR A + AA
Sbjct: 234 PWISLPKGKGIKLSIIEEARKRIAAQQATAA 264
>gi|297793379|ref|XP_002864574.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297310409|gb|EFH40833.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/264 (91%), Positives = 250/264 (94%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
QFKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFI
Sbjct: 120 ------QFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PWVSLPKGKGIKL+IIEEARKR A
Sbjct: 234 PWVSLPKGKGIKLTIIEEARKRLA 257
>gi|363806782|ref|NP_001242281.1| uncharacterized protein LOC100812132 [Glycine max]
gi|255645121|gb|ACU23059.1| unknown [Glycine max]
Length = 264
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/271 (89%), Positives = 253/271 (93%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLK ALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKCALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+ D+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVIDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PW+SLPKGKGIKLSIIEEARKR A + AA
Sbjct: 234 PWISLPKGKGIKLSIIEEARKRIAAQQATAA 264
>gi|118484853|gb|ABK94293.1| unknown [Populus trichocarpa]
Length = 263
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/270 (89%), Positives = 255/270 (94%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALT RE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VLAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLPKGKGIKLSIIEEA+KR A + +AA
Sbjct: 234 PWISLPKGKGIKLSIIEEAKKRLAASQAAA 263
>gi|15237195|ref|NP_200650.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
gi|115311859|sp|Q8VYK6.2|RS43_ARATH RecName: Full=40S ribosomal protein S4-3
gi|16226259|gb|AAL16117.1|AF428285_1 AT5g58420/mqj2_10 [Arabidopsis thaliana]
gi|21592333|gb|AAM64284.1| ribosomal protein S4-like [Arabidopsis thaliana]
gi|332009668|gb|AED97051.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
Length = 262
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/271 (89%), Positives = 254/271 (93%), Gaps = 9/271 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKL+IIEEARKR LA+ AA
Sbjct: 234 PWVSLPKGKGIKLTIIEEARKR--LASQQAA 262
>gi|18415395|ref|NP_568179.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
gi|20143904|sp|P49204.4|RS42_ARATH RecName: Full=40S ribosomal protein S4-2
gi|7546687|emb|CAB87265.1| ribosomal protein S4 [Arabidopsis thaliana]
gi|15292999|gb|AAK93610.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|17979543|gb|AAL50106.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
gi|19310835|gb|AAL85148.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|20147251|gb|AAM10339.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
gi|21537414|gb|AAM61755.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|332003724|gb|AED91107.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
Length = 262
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/271 (89%), Positives = 254/271 (93%), Gaps = 9/271 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKL+IIEEARKR LA+ AA
Sbjct: 234 PWVSLPKGKGIKLTIIEEARKR--LASQQAA 262
>gi|224135847|ref|XP_002322175.1| predicted protein [Populus trichocarpa]
gi|222869171|gb|EEF06302.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/270 (89%), Positives = 254/270 (94%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHV VD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+R++EAK
Sbjct: 61 VIAILMQRHVFVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE KI ++I
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENYKIVDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLPKGKGIKLSIIEEA+KR A + +AA
Sbjct: 234 PWVSLPKGKGIKLSIIEEAKKRLAASQNAA 263
>gi|224139252|ref|XP_002323021.1| predicted protein [Populus trichocarpa]
gi|222867651|gb|EEF04782.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/270 (89%), Positives = 256/270 (94%), Gaps = 9/270 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+R++EAK
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAK- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIK
Sbjct: 121 ------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIK 174
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KP
Sbjct: 175 FDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKP 234
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAAA 271
W+SLPKGKGIKLSIIEEA+KR LA S AA
Sbjct: 235 WISLPKGKGIKLSIIEEAKKR--LAASQAA 262
>gi|82400118|gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tuberosum]
Length = 264
Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/271 (87%), Positives = 255/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQR V+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61 VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKL+IIEEA+KR A ++ A
Sbjct: 234 PWVSLPKGKGIKLTIIEEAKKRLAAQSATPA 264
>gi|118480993|gb|ABK92450.1| unknown [Populus trichocarpa]
Length = 263
Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/270 (88%), Positives = 256/270 (94%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+R++EAK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF VGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+K
Sbjct: 174 KFGVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLPKGKGIKLSIIEEA++R A + +AA
Sbjct: 234 PWISLPKGKGIKLSIIEEAKERLAASQAAA 263
>gi|1173257|sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4
gi|457803|emb|CAA54095.1| ribosomal protein S4 [Solanum tuberosum]
Length = 264
Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/271 (87%), Positives = 255/271 (94%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQR V+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61 VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKL+IIE+ARKR A ++ A
Sbjct: 234 PWVSLPKGKGIKLTIIEDARKRLAAQSATPA 264
>gi|17979233|gb|AAL49933.1| AT5g58420/mqj2_10 [Arabidopsis thaliana]
gi|23505827|gb|AAN28773.1| At5g58420/mqj2_10 [Arabidopsis thaliana]
Length = 262
Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/271 (88%), Positives = 254/271 (93%), Gaps = 9/271 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRL+YALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLEYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGIKL+IIEEARKR LA+ AA
Sbjct: 234 PWVSLPKGKGIKLTIIEEARKR--LASQQAA 262
>gi|9759565|dbj|BAB11167.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
Length = 263
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/270 (89%), Positives = 253/270 (93%), Gaps = 9/270 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 3 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 63 ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIK
Sbjct: 122 ------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKP
Sbjct: 176 FDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKP 235
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAAA 271
WVSLPKGKGIKL+IIEEARKR LA+ AA
Sbjct: 236 WVSLPKGKGIKLTIIEEARKR--LASQQAA 263
>gi|18398393|ref|NP_565414.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
gi|75163156|sp|Q93VH9.1|RS41_ARATH RecName: Full=40S ribosomal protein S4-1
gi|13877537|gb|AAK43846.1|AF370469_1 Unknown protein [Arabidopsis thaliana]
gi|14334916|gb|AAK59636.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|17104537|gb|AAL34157.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|17978689|gb|AAL47338.1| unknown protein [Arabidopsis thaliana]
gi|21536498|gb|AAM60830.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|330251522|gb|AEC06616.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
Length = 261
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/262 (90%), Positives = 249/262 (95%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKGKGIKL+IIEEARKR
Sbjct: 234 PWVSLPKGKGIKLTIIEEARKR 255
>gi|297832340|ref|XP_002884052.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297329892|gb|EFH60311.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/262 (90%), Positives = 249/262 (95%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIP++NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPFLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKGKGIKL+IIEEARKR
Sbjct: 234 PWVSLPKGKGIKLTIIEEARKR 255
>gi|224122992|ref|XP_002318967.1| predicted protein [Populus trichocarpa]
gi|222857343|gb|EEE94890.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/270 (89%), Positives = 254/270 (94%), Gaps = 9/270 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALT REV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTGREV 61
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
+AILMQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAK
Sbjct: 62 LAILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAK- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI +FIK
Sbjct: 121 ------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIK 174
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FDVGNVVMVTGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTKP
Sbjct: 175 FDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKP 234
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAAA 271
W+SLPKGKGIKLSIIEEA+KR LA S AA
Sbjct: 235 WISLPKGKGIKLSIIEEAKKR--LAASQAA 262
>gi|297806729|ref|XP_002871248.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297317085|gb|EFH47507.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/271 (88%), Positives = 254/271 (93%), Gaps = 9/271 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKR+NAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRINAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIP++NTYDGRTIRYPDPLIK NDT+KLDLE NKI EFI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPFLNTYDGRTIRYPDPLIKPNDTVKLDLEENKIVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PW+SLPKGKGIKL+IIEEARKR LA+ AA
Sbjct: 234 PWMSLPKGKGIKLTIIEEARKR--LASQQAA 262
>gi|346470359|gb|AEO35024.1| hypothetical protein [Amblyomma maculatum]
Length = 265
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/262 (90%), Positives = 251/262 (95%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWML+KLGGAFAPKPSSGPHK+RECLPLILILRN+LKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLNKLGGAFAPKPSSGPHKARECLPLILILRNKLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHV+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLETNKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLETNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKGKGI L+IIEEARKR
Sbjct: 234 PWVSLPKGKGIMLTIIEEARKR 255
>gi|357506135|ref|XP_003623356.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355498371|gb|AES79574.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|388496326|gb|AFK36229.1| unknown [Medicago truncatula]
Length = 265
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/262 (90%), Positives = 249/262 (95%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLEQNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG IKNR+KH G+FETIH+QDA GHEFATRLGNVFTIG+G K
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGFIKNRKKHMGTFETIHVQDAAGHEFATRLGNVFTIGRGPK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKG+GIKL++IEEARKR
Sbjct: 234 PWVSLPKGRGIKLTVIEEARKR 255
>gi|1173256|sp|P46299.1|RS4_GOSHI RecName: Full=40S ribosomal protein S4
gi|488739|emb|CAA55882.1| ribosomal protein, small subunit 4e (RS4e) [Gossypium hirsutum]
Length = 262
Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/269 (88%), Positives = 250/269 (92%), Gaps = 7/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHV+VD KVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH+I +E K
Sbjct: 61 VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PWVSLPK KGIKLSIIEEARKR A +A
Sbjct: 234 PWVSLPKRKGIKLSIIEEARKRLAAQNAA 262
>gi|3914899|sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4
gi|2331301|gb|AAB66899.1| ribosomal protein S4 type I [Zea mays]
gi|194698488|gb|ACF83328.1| unknown [Zea mays]
gi|195618184|gb|ACG30922.1| 40S ribosomal protein S4 [Zea mays]
gi|195625650|gb|ACG34655.1| 40S ribosomal protein S4 [Zea mays]
gi|413932477|gb|AFW67028.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 265
Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/263 (89%), Positives = 249/263 (94%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH IRDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG K
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKGIKLSIIEE RKR
Sbjct: 234 PWVSLPKGKGIKLSIIEEQRKRD 256
>gi|242032315|ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
gi|241917406|gb|EER90550.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
Length = 264
Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/263 (89%), Positives = 249/263 (94%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH IRDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG K
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKGIKLSIIEE RKR
Sbjct: 234 PWVSLPKGKGIKLSIIEEQRKRD 256
>gi|257815610|gb|ACV70143.1| putative 40S ribosomal protein S4 [Jatropha curcas]
Length = 264
Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/258 (93%), Positives = 245/258 (94%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRL YALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLPYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLV KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61 VIAILMQRHVLVVGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQDA G EFATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGPEFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
PWVS PKGKGIKLSIIEE
Sbjct: 234 PWVSFPKGKGIKLSIIEE 251
>gi|242052937|ref|XP_002455614.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
gi|241927589|gb|EES00734.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
Length = 265
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/263 (88%), Positives = 248/263 (94%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYP+GFMDV+SIPKT EN+RLLYDTKGRFRLHS+RDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPSGFMDVISIPKTGENYRLLYDTKGRFRLHSVRDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++DALGH FATR+GNVFTIGKG K
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRMGNVFTIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKGIKLSIIEE RKR
Sbjct: 234 PWVSLPKGKGIKLSIIEEQRKRD 256
>gi|242087691|ref|XP_002439678.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
gi|241944963|gb|EES18108.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
Length = 263
Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/270 (86%), Positives = 252/270 (93%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQR V+VD KVRTDKTYP+GFMDVVSIPKT ENFRLLYDTKGRFRLHSIRD+EAK
Sbjct: 61 VISILMQRLVMVDGKVRTDKTYPSGFMDVVSIPKTGENFRLLYDTKGRFRLHSIRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FK+CKVRSVQFGQKGIP++NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKMCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IK+REKHKGSFETIH++D+LGH+FATR+GNVFTIGK K
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKDKK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLPKGKGIKLSIIEEARKR A A + A
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKRNAEAAAEA 263
>gi|115443689|ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group]
gi|109940160|sp|P49398.3|RS4_ORYSJ RecName: Full=40S ribosomal protein S4; AltName: Full=SCAR protein
SS620
gi|313103631|pdb|3IZ6|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|50252099|dbj|BAD28085.1| putative ribosomal protein S4 [Oryza sativa Japonica Group]
gi|113535155|dbj|BAF07538.1| Os02g0105900 [Oryza sativa Japonica Group]
gi|125537716|gb|EAY84111.1| hypothetical protein OsI_05494 [Oryza sativa Indica Group]
gi|125580492|gb|EAZ21423.1| hypothetical protein OsJ_05027 [Oryza sativa Japonica Group]
gi|169244433|gb|ACA50490.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
gi|215678909|dbj|BAG96339.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215734827|dbj|BAG95549.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415995|gb|ADM86872.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 265
Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/263 (88%), Positives = 248/263 (94%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP+IKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++DALGH+FATRLGNVFTIGKG K
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKGIKLSIIEE RKR
Sbjct: 234 PWVSLPKGKGIKLSIIEEQRKRD 256
>gi|115436514|ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group]
gi|53791616|dbj|BAD52963.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
gi|113532546|dbj|BAF04929.1| Os01g0358400 [Oryza sativa Japonica Group]
gi|125525886|gb|EAY74000.1| hypothetical protein OsI_01884 [Oryza sativa Indica Group]
gi|125570348|gb|EAZ11863.1| hypothetical protein OsJ_01737 [Oryza sativa Japonica Group]
gi|149391309|gb|ABR25672.1| 40S ribosomal protein S4 [Oryza sativa Indica Group]
gi|215692713|dbj|BAG88133.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/263 (88%), Positives = 247/263 (93%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++DALGH FATRLGNVFTIGKG K
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKGIKLSIIEE RKR
Sbjct: 234 PWVSLPKGKGIKLSIIEEQRKRD 256
>gi|44894458|gb|AAS48726.1| ribosomal protein S4 [Zea mays]
Length = 265
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/263 (88%), Positives = 247/263 (93%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH IRDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP IKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPPIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKGS ETIH++D+LGH+FATR+GNVFTIGKG K
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGSLETIHVEDSLGHQFATRMGNVFTIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKGIKLSIIEE RKR
Sbjct: 234 PWVSLPKGKGIKLSIIEEQRKRD 256
>gi|357483185|ref|XP_003611879.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|357516021|ref|XP_003628299.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|217074206|gb|ACJ85463.1| unknown [Medicago truncatula]
gi|355513214|gb|AES94837.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355522321|gb|AET02775.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|388493800|gb|AFK34966.1| unknown [Medicago truncatula]
gi|388509492|gb|AFK42812.1| unknown [Medicago truncatula]
Length = 265
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/258 (90%), Positives = 246/258 (95%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHSVRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP+I+ANDTIKLDLE NKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGG+NRGRVG+IKNREKHKG+FETIH+QDA GHEFATRL NVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGKNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLVNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
PWVSLPKGKGIKL++IEE
Sbjct: 234 PWVSLPKGKGIKLTVIEE 251
>gi|326500636|dbj|BAJ94984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/262 (87%), Positives = 247/262 (94%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQRH++VD KVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AK
Sbjct: 61 VQSILMQRHIMVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKGKGIKL+IIEE RKR
Sbjct: 234 PWVSLPKGKGIKLTIIEEQRKR 255
>gi|115463485|ref|NP_001055342.1| Os05g0368300 [Oryza sativa Japonica Group]
gi|113578893|dbj|BAF17256.1| Os05g0368300 [Oryza sativa Japonica Group]
Length = 263
Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/270 (86%), Positives = 250/270 (92%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHV+VD KVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHSI+DE+AK
Sbjct: 61 VISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGN+VMVTGGRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK K
Sbjct: 174 KFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLPKGKGIKLSIIEEARKR A A + A
Sbjct: 234 PWVSLPKGKGIKLSIIEEARKRNAEAAAEA 263
>gi|222631333|gb|EEE63465.1| hypothetical protein OsJ_18278 [Oryza sativa Japonica Group]
Length = 398
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/269 (86%), Positives = 249/269 (92%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYREV
Sbjct: 137 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 196
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ILMQRHV+VD KVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHSI+DE+AK
Sbjct: 197 ISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAK- 255
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
FKLCKVRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 256 ------FKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIK 309
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FDVGN+VMVTGGRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KP
Sbjct: 310 FDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKP 369
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
WVSLPKGKGIKLSIIEEARKR A A + A
Sbjct: 370 WVSLPKGKGIKLSIIEEARKRNAEAAAEA 398
>gi|125552065|gb|EAY97774.1| hypothetical protein OsI_19685 [Oryza sativa Indica Group]
Length = 279
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/269 (86%), Positives = 249/269 (92%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYREV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ILMQRHV+VD KVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHSI+DE+AK
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAK- 136
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
FKLCKVRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 137 ------FKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIMDFIK 190
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FDVGNVVMVTGGRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KP
Sbjct: 191 FDVGNVVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKP 250
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
WVSLPKGKGIKLSIIEEARKR A A + A
Sbjct: 251 WVSLPKGKGIKLSIIEEARKRNAEAAAEA 279
>gi|2345154|gb|AAB67831.1| ribsomal protein S4 [Zea mays]
gi|194707820|gb|ACF87994.1| unknown [Zea mays]
gi|195607094|gb|ACG25377.1| 40S ribosomal protein S4 [Zea mays]
gi|195653033|gb|ACG45984.1| 40S ribosomal protein S4 [Zea mays]
gi|414873848|tpg|DAA52405.1| TPA: ribosomal protein S4 [Zea mays]
Length = 265
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/263 (87%), Positives = 246/263 (93%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYAL YRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRLH IRDE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTMENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKG F+TIH++D++GH+FATR+GNVFTIGKG K
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGGFDTIHVEDSMGHQFATRMGNVFTIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKGIKLSIIEE R+R
Sbjct: 234 PWVSLPKGKGIKLSIIEEQRRRD 256
>gi|357134623|ref|XP_003568916.1| PREDICTED: 40S ribosomal protein S4-like [Brachypodium distachyon]
Length = 265
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/262 (87%), Positives = 246/262 (93%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQR +LVD KVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE++K
Sbjct: 61 VQSILMQRQILVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDSK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKGKGIKL+IIEE RKR
Sbjct: 234 PWVSLPKGKGIKLTIIEEQRKR 255
>gi|48596901|dbj|BAD22763.1| ribosomal protein [Bromus inermis]
Length = 265
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/262 (86%), Positives = 246/262 (93%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP HWMLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQRH++VD KVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AK
Sbjct: 61 VQSILMQRHIMVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRSVQFGQKGIPY+NT DGRTIRYPDPLIKANDTIKLDLETNKI +FI
Sbjct: 121 -------YKLCKVRSVQFGQKGIPYLNTNDGRTIRYPDPLIKANDTIKLDLETNKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWV+LPKGKGIKL+IIEE RKR
Sbjct: 234 PWVTLPKGKGIKLTIIEEQRKR 255
>gi|17367482|sp|O81363.1|RS4_PRUAR RecName: Full=40S ribosomal protein S4
gi|3264763|gb|AAC24585.1| 40S ribosomal protein S4 [Prunus armeniaca]
Length = 261
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/262 (88%), Positives = 243/262 (92%), Gaps = 11/262 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V++ILMQRH+LVD K+ + DVVSIPKTNENFRLLYDTKGRFRLHSIRDEE+K
Sbjct: 61 VVSILMQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 116
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT+FI
Sbjct: 117 -------FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFI 169
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTK
Sbjct: 170 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTK 229
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKGKGIKL+I+EEA+KR
Sbjct: 230 PWVSLPKGKGIKLTILEEAKKR 251
>gi|297736557|emb|CBI25428.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/253 (89%), Positives = 238/253 (94%), Gaps = 7/253 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRH+ VD KVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHIFVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK FKLCKVRSVQF
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK-------FKLCKVRSVQF 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
GQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTGGRNRGR
Sbjct: 114 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+IKNREKHKG+FETIHIQDA GHEFATRLGNVF IGKGTKPWVSLPKGKGIKLSIIEE
Sbjct: 174 VGVIKNREKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPKGKGIKLSIIEE 233
Query: 259 ARKRQALATSAAA 271
A+KR A +++A
Sbjct: 234 AKKRLAAQAASSA 246
>gi|297745843|emb|CBI15899.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/253 (89%), Positives = 238/253 (94%), Gaps = 7/253 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVD KVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK FKLCKVRSVQF
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK-------FKLCKVRSVQF 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
GQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTGGRNRGR
Sbjct: 114 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+IKNREK KGSFETIH+QDA GHEFATRLGNVF IGKGTKPWV+LPKGKGIKLSIIEE
Sbjct: 174 VGVIKNREKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPKGKGIKLSIIEE 233
Query: 259 ARKRQALATSAAA 271
A+KR A +++A
Sbjct: 234 AQKRLAAQAASSA 246
>gi|116779177|gb|ABK21170.1| unknown [Picea sitchensis]
gi|116781965|gb|ABK22318.1| unknown [Picea sitchensis]
gi|148909584|gb|ABR17884.1| unknown [Picea sitchensis]
Length = 263
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/263 (84%), Positives = 240/263 (91%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAI+MQR + VD KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRFRLHSI+DEEAK
Sbjct: 61 VIAIVMQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRSVQFG KGIPY+NTYDGRTIRYPDPL+KANDTIK+DLET KI EFI
Sbjct: 121 -------YKLCKVRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKIDLETGKIKEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKGTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKG+KLSIIEEARKR
Sbjct: 234 PWVSLPKGKGVKLSIIEEARKRH 256
>gi|116781974|gb|ABK22322.1| unknown [Picea sitchensis]
gi|116782831|gb|ABK22679.1| unknown [Picea sitchensis]
gi|224284198|gb|ACN39835.1| unknown [Picea sitchensis]
gi|224285571|gb|ACN40504.1| unknown [Picea sitchensis]
gi|224286248|gb|ACN40833.1| unknown [Picea sitchensis]
Length = 263
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/263 (84%), Positives = 240/263 (91%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAI+MQR + VD KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRFRLHSI+DEEAK
Sbjct: 61 VIAIVMQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRSVQFG KGIPY+NTYDGRTIRYPDPL+KANDTIK+DLET KI EFI
Sbjct: 121 -------YKLCKVRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKVDLETGKIKEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNV+MVTGGRNRGRVG+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKGTK
Sbjct: 174 KFDVGNVIMVTGGRNRGRVGVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PWVSLPKGKG+KLSIIEEARKR
Sbjct: 234 PWVSLPKGKGVKLSIIEEARKRH 256
>gi|10177019|dbj|BAB10257.1| ribosomal protein S4 [Arabidopsis thaliana]
Length = 244
Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/253 (88%), Positives = 236/253 (93%), Gaps = 9/253 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VD KVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK FKLCKVRS+QF
Sbjct: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK-------FKLCKVRSIQF 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
GQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTGGRNRGR
Sbjct: 114 GQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEE
Sbjct: 174 VGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEE 233
Query: 259 ARKRQALATSAAA 271
ARKR LA+ AA
Sbjct: 234 ARKR--LASQQAA 244
>gi|79327186|ref|NP_001031846.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
gi|332003725|gb|AED91108.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
Length = 244
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/253 (88%), Positives = 236/253 (93%), Gaps = 9/253 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VD KVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK FKLCKVRS+QF
Sbjct: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK-------FKLCKVRSIQF 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
GQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTGGRNRGR
Sbjct: 114 GQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEE
Sbjct: 174 VGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEE 233
Query: 259 ARKRQALATSAAA 271
ARKR LA+ AA
Sbjct: 234 ARKR--LASQQAA 244
>gi|47777385|gb|AAT38019.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 245
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/252 (85%), Positives = 233/252 (92%), Gaps = 7/252 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGGAFAPKPSSGPHK+RECLPLILILRNRLKYALTYREVI+ILMQRHV+VD KVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHSI+DE+AK FKLCKVRSVQF
Sbjct: 61 DKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAK-------FKLCKVRSVQF 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
GQKGIP++NT DGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGN+VMVTGGRN GR
Sbjct: 114 GQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIKLSIIEE
Sbjct: 174 VGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEE 233
Query: 259 ARKRQALATSAA 270
ARKR A A + A
Sbjct: 234 ARKRNAEAAAEA 245
>gi|168057168|ref|XP_001780588.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667954|gb|EDQ54571.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/270 (75%), Positives = 239/270 (88%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AI+MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH I EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRS QFG KG+PYI T+DGRTIRYPDPLIKANDT+K++LET K+ EFI
Sbjct: 121 -------YKLCKVRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN+VMVTGGRNRGR+G+I++REKHKGSF+ IH+ D+ G++FATR+GNVFTIG+GTK
Sbjct: 174 KFDIGNIVMVTGGRNRGRIGVIQHREKHKGSFDIIHVTDSTGNQFATRMGNVFTIGQGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW++LP+GKGIKLSI+EEA+KR+A+ A
Sbjct: 234 PWITLPRGKGIKLSIVEEAKKRKAVTNQVA 263
>gi|168014621|ref|XP_001759850.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688980|gb|EDQ75354.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/270 (75%), Positives = 240/270 (88%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AI+MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH+I EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRS QFG KG+PYI T+DGRTIRYPDPLIKANDT+K++LET K+ EFI
Sbjct: 121 -------YKLCKVRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN+VMVTGGRNRGR+G+I++REKHKGSF+ IH+ D+ G +FATR+GNVFT+G+GTK
Sbjct: 174 KFDIGNIVMVTGGRNRGRIGVIQHREKHKGSFDIIHVTDSTGQQFATRMGNVFTVGQGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR-QALATSA 269
PW++LP+GKGIKLSI+EEA+KR QAL SA
Sbjct: 234 PWITLPRGKGIKLSIVEEAKKRTQALKASA 263
>gi|168027041|ref|XP_001766039.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682682|gb|EDQ69098.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 308
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/270 (75%), Positives = 238/270 (88%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AI+MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH I EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LET K+ EFI
Sbjct: 121 -------YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGN+VMVTGGRNRGR+G+I +REKHKGSF+ IH+ DA G++FATR+GNV+TIG+GTK
Sbjct: 174 KFDVGNIVMVTGGRNRGRIGVIHHREKHKGSFDIIHVTDATGNQFATRMGNVYTIGQGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW++LP+GKGIKLSI+EEA+KR+A AA
Sbjct: 234 PWITLPRGKGIKLSIVEEAKKRKATLKQAA 263
>gi|168066840|ref|XP_001785339.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663064|gb|EDQ49851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/270 (75%), Positives = 239/270 (88%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AI+MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH I EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR+ QFG KG+P++ T+DGRTIRYPDPLIKANDT+K++LET K+ EFI
Sbjct: 121 -------YKLCKVRAAQFGDKGVPHVTTFDGRTIRYPDPLIKANDTVKINLETGKVVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN+VMVTGGRNRGR+G+I +REKHKGSF+ IH+ DA+G++FATR+GNVFTIG+GTK
Sbjct: 174 KFDIGNIVMVTGGRNRGRIGVIHHREKHKGSFDIIHVTDAIGNQFATRMGNVFTIGQGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW++LP+GKGIKLSI+EEA+KR+A AA
Sbjct: 234 PWITLPRGKGIKLSIVEEAKKRKATEKQAA 263
>gi|167998342|ref|XP_001751877.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696975|gb|EDQ83312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/270 (75%), Positives = 240/270 (88%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AI+MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH+I EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LET K+ EFI
Sbjct: 121 -------YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN+VMVTGGRNRGR+G+I++REKHKGSF+ IH+ DA G +FATR+GNVFT+G+GTK
Sbjct: 174 KFDIGNIVMVTGGRNRGRIGVIQHREKHKGSFDIIHVTDATGQQFATRMGNVFTVGQGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR-QALATSA 269
PW++LP+GKGIKLSI+EEA+KR QAL +A
Sbjct: 234 PWITLPRGKGIKLSIVEEAKKRGQALKAAA 263
>gi|168014095|ref|XP_001759591.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689130|gb|EDQ75503.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/270 (75%), Positives = 240/270 (88%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AI+MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH+I EEAK
Sbjct: 61 VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LET K+ EFI
Sbjct: 121 -------YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN+VMVTGGRNRGR+G+I++REKHKGSF+ IH+ D+ G +FATR+GNVFT+G+GTK
Sbjct: 174 KFDIGNIVMVTGGRNRGRIGVIQHREKHKGSFDIIHVTDSTGQQFATRMGNVFTVGQGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR-QALATSA 269
PW++LP+GKGIKLSI+EEA+KR QAL +A
Sbjct: 234 PWITLPRGKGIKLSIVEEAKKRTQALKAAA 263
>gi|302781420|ref|XP_002972484.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
gi|300159951|gb|EFJ26570.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
Length = 258
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/262 (77%), Positives = 233/262 (88%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLK LNAPKHWML KLGGAFAPKPSSGPHK RECLPL+++LRNRL YALTYRE
Sbjct: 1 MVRGPKKHLKVLNAPKHWMLSKLGGAFAPKPSSGPHKERECLPLVIVLRNRLNYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AI+MQ+ + +D KVRTDK YPAGFMDV+++ K +EN+RLLYD+KGRF LHSI EEAK
Sbjct: 61 VVAIVMQKLISIDGKVRTDKCYPAGFMDVLTVGKVDENYRLLYDSKGRFTLHSINAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVR+V+FG KGIP++ TYDGRTIRYPDPLIKANDTIK+DLET KI EFI
Sbjct: 121 -------FKLCKVRAVRFGAKGIPFLTTYDGRTIRYPDPLIKANDTIKIDLETGKIKEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRNRGRVG I++REKHKGSF+ IHI+D++G +FATR+GNVFTIG+GTK
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGTIQHREKHKGSFDIIHIKDSVGQDFATRMGNVFTIGQGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKGKGIKLSI+EEARKR
Sbjct: 234 PWVSLPKGKGIKLSIVEEARKR 255
>gi|302805125|ref|XP_002984314.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
gi|300148163|gb|EFJ14824.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
Length = 258
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/262 (77%), Positives = 233/262 (88%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLK LNAPKHWML KLGGAFAPKPSSGPHK RECLPL+++LRNRL YALTYRE
Sbjct: 1 MVRGPKKHLKVLNAPKHWMLSKLGGAFAPKPSSGPHKERECLPLVIVLRNRLNYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+AI+MQ+ + +D KVRTDK YPAGFMDV+++ K +EN+RLLYD+KGRF LHSI EEAK
Sbjct: 61 VVAIVMQKLISIDGKVRTDKCYPAGFMDVLTVGKVDENYRLLYDSKGRFTLHSINSEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVR+V+FG KGIP++ TYDGRTIRYPDPLIKANDTIK+DLET KI EFI
Sbjct: 121 -------FKLCKVRAVRFGAKGIPFLTTYDGRTIRYPDPLIKANDTIKIDLETGKIKEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGN+VMVTGGRNRGRVG I++REKHKGSF+ IHI+D++G +FATR+GNVFTIG+GTK
Sbjct: 174 KFDVGNLVMVTGGRNRGRVGTIQHREKHKGSFDIIHIKDSVGQDFATRMGNVFTIGQGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
PWVSLPKGKGIKLSI+EEARKR
Sbjct: 234 PWVSLPKGKGIKLSIVEEARKR 255
>gi|351721738|ref|NP_001235428.1| uncharacterized protein LOC100500000 [Glycine max]
gi|255628423|gb|ACU14556.1| unknown [Glycine max]
Length = 205
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/212 (92%), Positives = 202/212 (95%), Gaps = 7/212 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61 VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FI
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSF 212
KFDVGNVVMVTGGRNRGRVG+IKNREKHKG
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGKL 205
>gi|431912035|gb|ELK14176.1| Protein DBF4 like protein B [Pteropus alecto]
Length = 980
Score = 388 bits (997), Expect = e-105, Method: Composition-based stats.
Identities = 183/271 (67%), Positives = 215/271 (79%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PW+SLP+GKGI+L+I EE KR A S+ A
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSGA 264
>gi|384499638|gb|EIE90129.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
Length = 262
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/258 (70%), Positives = 213/258 (82%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH+KRL APKHWMLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHMKRLAAPKHWMLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQR V VD KVRTD T+PAGFMDV+S+ KT ENFRL+YD KGRF +H I DEEAK
Sbjct: 61 VQSILMQRLVKVDGKVRTDSTFPAGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G KG+PYI T+DGRTIRYPDPLIK NDTI+ ++ET KI +F+
Sbjct: 121 -------YKLCKVKKVMIGSKGVPYITTHDGRTIRYPDPLIKTNDTIRFNIETGKIEDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G K
Sbjct: 174 KFDVGNVVMVTGGRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
PW+SLPKGKG+KLSI EE
Sbjct: 234 PWISLPKGKGVKLSITEE 251
>gi|384487368|gb|EIE79548.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
Length = 262
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/258 (70%), Positives = 213/258 (82%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH+KRL APKHWMLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHMKRLAAPKHWMLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQR V VD KVRTD T+PAGFMDV+S+ KT ENFRL+YD KGRF +H I DEEAK
Sbjct: 61 VQSILMQRLVKVDGKVRTDSTFPAGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G KG+PYI T+DGRTIRYPDPLIK NDTI+ ++ET KI +F+
Sbjct: 121 -------YKLCKVKKVMIGSKGVPYITTHDGRTIRYPDPLIKTNDTIRFNIETGKIEDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGNVVMVTGGRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G K
Sbjct: 174 KFDVGNVVMVTGGRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
PW+SLPKGKG+KLSI EE
Sbjct: 234 PWISLPKGKGVKLSITEE 251
>gi|384492812|gb|EIE83303.1| 40S ribosomal protein S4 [Rhizopus delemar RA 99-880]
Length = 263
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/258 (70%), Positives = 213/258 (82%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KRL APKHWMLDKL G++APKPSSGPHK+RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MARGPKKHMKRLAAPKHWMLDKLLGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQR V VD KVRTD T+PAGFMDV+SI KT ENFRL+YD KGRF +H I DEEAK
Sbjct: 61 VQSILMQRLVKVDGKVRTDSTFPAGFMDVISIEKTGENFRLVYDVKGRFAVHRITDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G KG+PYI T+DGRTIRYPDPLIK NDT++ ++ET KI +F+
Sbjct: 121 -------YKLCKVKKVLIGSKGVPYITTHDGRTIRYPDPLIKTNDTVRFNIETGKIEDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGN+VMVTGGRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G K
Sbjct: 174 KFDVGNIVMVTGGRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
W+SLPKGKG+KLSI EE
Sbjct: 234 SWISLPKGKGVKLSITEE 251
>gi|307109802|gb|EFN58039.1| hypothetical protein CHLNCDRAFT_59606 [Chlorella variabilis]
Length = 261
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/261 (69%), Positives = 213/261 (81%), Gaps = 7/261 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPKHWMLDKLGG FAPKPS GPHK+RECLPLIL+LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLNAPKHWMLDKLGGIFAPKPSPGPHKTRECLPLILLLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQR V VD KVRTDKTYP GFMDV+ IPKT+E+FRL+YD KGRF +H I EEA
Sbjct: 61 VTSILMQRLVEVDGKVRTDKTYPVGFMDVIDIPKTDEHFRLVYDAKGRFVVHRITKEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + FG+ GIP+I T+DGRT+RYPDP IK NDT+ LDLE+ K+ +FI
Sbjct: 120 ------SYKLCKVKRLAFGKGGIPHIGTHDGRTVRYPDPEIKVNDTVMLDLESGKVKDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGN+ M TGG N GRVG I ++EKHKGSF+ +HI+DA GH FATR+ NVF IGKG K
Sbjct: 174 KFDVGNLAMATGGHNNGRVGTIVHKEKHKGSFDIVHIKDAAGHTFATRMTNVFVIGKGDK 233
Query: 241 PWVSLPKGKGIKLSIIEEARK 261
P +SLPKGKGI+ SI++E K
Sbjct: 234 PMISLPKGKGIRQSILQEQAK 254
>gi|392875736|gb|AFM86700.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883616|gb|AFM90640.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 264
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 215/270 (79%), Gaps = 6/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 ------QYKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 174
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 175 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 234
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 235 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 264
>gi|255077197|ref|XP_002502247.1| predicted protein [Micromonas sp. RCC299]
gi|226517512|gb|ACO63505.1| predicted protein [Micromonas sp. RCC299]
Length = 258
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/263 (67%), Positives = 213/263 (80%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAPKHWMLDKLGG FAPKPS+GPHK+RECLPL LILRNRLKYALTY+E
Sbjct: 1 MPRGPKKHLKRLNAPKHWMLDKLGGVFAPKPSAGPHKTRECLPLCLILRNRLKYALTYKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR V VD K R DK YPAGFMDVVSI KT+E+FRL+YD KGRF +H I EA
Sbjct: 61 VTTILMQRLVKVDGKTRVDKCYPAGFMDVVSIDKTDEHFRLIYDAKGRFVVHRISSTEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV++ + G KG+P +N +DGRTIRYPDP+I +DT+ +D+ TNKIT+ I
Sbjct: 120 ------QYKLCKVKTKRLGDKGVPCVNLHDGRTIRYPDPVINESDTVMVDIATNKITDHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
K+D G +VM+TGGRNRGRVG+I+ REKHKGS E +H++DA GHEFATR N F IG+G K
Sbjct: 174 KYDAGALVMITGGRNRGRVGVIQRREKHKGSVEVVHVKDAGGHEFATRSSNTFVIGEGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
P +SLPKGKG++L+I+EE +R+
Sbjct: 234 PMISLPKGKGLRLTIVEELERRK 256
>gi|431892606|gb|ELK03039.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 263
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKTEENFRLIYDTKGRFAVHRITSEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KG+P++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGVPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F +GKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVVGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|350539629|ref|NP_001233602.1| 40S ribosomal protein S4 [Cricetulus griseus]
gi|1350996|sp|P47961.2|RS4_CRIGR RecName: Full=40S ribosomal protein S4
gi|453574|dbj|BAA05485.1| ribosomal protein S4 [Cricetulus griseus]
Length = 263
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|74179765|dbj|BAE22507.1| unnamed protein product [Mus musculus]
Length = 263
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|119592221|gb|EAW71815.1| ribosomal protein S4, X-linked, isoform CRA_a [Homo sapiens]
Length = 385
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/272 (66%), Positives = 214/272 (78%), Gaps = 7/272 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
PW+SLP+GKGI+L+I EE KR A S +
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSRVCE 265
>gi|395862302|ref|XP_003803397.1| PREDICTED: 40S ribosomal protein S4, X isoform [Otolemur garnettii]
Length = 263
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|4506725|ref|NP_000998.1| 40S ribosomal protein S4, X isoform X isoform [Homo sapiens]
gi|6677805|ref|NP_033120.1| 40S ribosomal protein S4, X isoform [Mus musculus]
gi|56090273|ref|NP_001007601.1| 40S ribosomal protein S4, X isoform [Rattus norvegicus]
gi|78369408|ref|NP_001030522.1| 40S ribosomal protein S4 [Bos taurus]
gi|255653020|ref|NP_001157422.1| 40S ribosomal protein S4 [Equus caballus]
gi|324021713|ref|NP_001191212.1| ribosomal protein S4 [Sus scrofa]
gi|354725914|ref|NP_001238971.1| 40S ribosomal protein S4, X isoform [Canis lupus familiaris]
gi|388453927|ref|NP_001252551.1| 40S ribosomal protein S4, X isoform [Macaca mulatta]
gi|114689107|ref|XP_001139217.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Pan
troglodytes]
gi|291407689|ref|XP_002720153.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 2
[Oryctolagus cuniculus]
gi|293363046|ref|XP_002730304.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
norvegicus]
gi|296235756|ref|XP_002763034.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Callithrix jacchus]
gi|332263743|ref|XP_003280912.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Nomascus
leucogenys]
gi|390479927|ref|XP_003735813.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Callithrix jacchus]
gi|392343218|ref|XP_003754823.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
norvegicus]
gi|397467181|ref|XP_003805305.1| PREDICTED: 40S ribosomal protein S4, X isoform [Pan paniscus]
gi|402910522|ref|XP_003917923.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Papio anubis]
gi|410988822|ref|XP_004000676.1| PREDICTED: 40S ribosomal protein S4, X isoform [Felis catus]
gi|426250215|ref|XP_004018833.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
gi|426257226|ref|XP_004022233.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
gi|426396382|ref|XP_004064423.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Gorilla
gorilla gorilla]
gi|426396384|ref|XP_004064424.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 2 [Gorilla
gorilla gorilla]
gi|426396386|ref|XP_004064425.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Gorilla
gorilla gorilla]
gi|50401474|sp|Q76MY1.3|RS4X_MACFU RecName: Full=40S ribosomal protein S4, X isoform
gi|50401475|sp|Q76N24.3|RS4X_CERAE RecName: Full=40S ribosomal protein S4, X isoform
gi|50403621|sp|P62703.2|RS4X_RAT RecName: Full=40S ribosomal protein S4, X isoform
gi|50403628|sp|P62701.2|RS4X_HUMAN RecName: Full=40S ribosomal protein S4, X isoform; AltName:
Full=SCR10; AltName: Full=Single copy abundant mRNA
protein
gi|50403629|sp|P62702.2|RS4X_MOUSE RecName: Full=40S ribosomal protein S4, X isoform
gi|50403630|sp|P62704.2|RS4X_MESAU RecName: Full=40S ribosomal protein S4, X isoform
gi|50403631|sp|P62705.2|RS4X_FELCA RecName: Full=40S ribosomal protein S4, X isoform
gi|118572714|sp|P79103.3|RS4_BOVIN RecName: Full=40S ribosomal protein S4
gi|1083572|pir||A55276 ribosomal protein S4 - western wild mouse
gi|2148029|pir||I48169 ribosomal protein S4 - hamster (Mesocricetus sp.)
gi|57135|emb|CAA32427.1| unnamed protein product [Rattus rattus]
gi|200864|gb|AAA40075.1| ribosomal protein S4 [Mus musculus]
gi|220321|dbj|BAA01858.1| ribosomal protein S4 [Mesocricetus sp.]
gi|337510|gb|AAA63255.1| ribosomal protein S4X isoform [Homo sapiens]
gi|2791861|gb|AAB96968.1| ribosomal protein s4 X isoform [Homo sapiens]
gi|4115718|dbj|BAA36501.1| ribosomal protein S4X [Chlorocebus aethiops]
gi|6519820|dbj|BAA87932.1| ribosomal protein S4X (RPS4X) [Macaca fuscata]
gi|12653405|gb|AAH00472.1| Ribosomal protein S4, X-linked [Homo sapiens]
gi|12832435|dbj|BAB22106.1| unnamed protein product [Mus musculus]
gi|12846290|dbj|BAB27108.1| unnamed protein product [Mus musculus]
gi|12846695|dbj|BAB27268.1| unnamed protein product [Mus musculus]
gi|14318606|gb|AAH09100.1| Ribosomal protein S4, X-linked [Mus musculus]
gi|26353416|dbj|BAC40338.1| unnamed protein product [Mus musculus]
gi|48145587|emb|CAG33016.1| RPS4X [Homo sapiens]
gi|48735278|gb|AAH71662.1| Ribosomal protein S4, X-linked [Homo sapiens]
gi|55824731|gb|AAH86560.1| Ribosomal protein S4, X-linked [Rattus norvegicus]
gi|71680222|gb|AAI00904.1| RPS4X protein [Homo sapiens]
gi|71681664|gb|AAI00905.1| RPS4X protein [Homo sapiens]
gi|74139944|dbj|BAE31810.1| unnamed protein product [Mus musculus]
gi|74267717|gb|AAI02477.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
gi|77415376|gb|AAI06153.1| Ribosomal protein S4, X-linked [Mus musculus]
gi|90075468|dbj|BAE87414.1| unnamed protein product [Macaca fascicularis]
gi|119592223|gb|EAW71817.1| ribosomal protein S4, X-linked, isoform CRA_c [Homo sapiens]
gi|123993841|gb|ABM84522.1| ribosomal protein S4, X-linked [synthetic construct]
gi|123996497|gb|ABM85850.1| ribosomal protein S4, X-linked [synthetic construct]
gi|148682180|gb|EDL14127.1| mCG116623 [Mus musculus]
gi|148745531|gb|AAI41996.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
gi|149042162|gb|EDL95869.1| rCG36441 [Rattus norvegicus]
gi|189053066|dbj|BAG34688.1| unnamed protein product [Homo sapiens]
gi|193783638|dbj|BAG53549.1| unnamed protein product [Homo sapiens]
gi|296470839|tpg|DAA12954.1| TPA: ribosomal protein S4, X-linked [Bos taurus]
gi|327239242|gb|AEA39488.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
gi|327239334|gb|AEA39534.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
gi|387542680|gb|AFJ71967.1| 40S ribosomal protein S4, X isoform X isoform [Macaca mulatta]
Length = 263
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|145355247|ref|XP_001421876.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144582115|gb|ABP00170.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 253
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/258 (69%), Positives = 209/258 (81%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGG FAPKPS GPHKSRECLPL LILRNRLKYALTY+E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGVFAPKPSPGPHKSRECLPLCLILRNRLKYALTYKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR V VD K+R DK YP G MDVVSI K++E+FRL+YD KGRF +H I EA
Sbjct: 61 VTTILMQRVVKVDGKIRMDKCYPCGIMDVVSIEKSDEHFRLIYDNKGRFVVHRIEAIEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV+S + G KG+P + +DGRTIRYPDPLIK D++ +D+ TNKIT+F+
Sbjct: 120 ------QYKLCKVKSKKLGDKGVPCVGLHDGRTIRYPDPLIKEGDSVMVDIATNKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVG + M+TGGRN GRVG+I+ REKH GSFE +H++DA G EFATR NVF IG G+K
Sbjct: 174 KFDVGALCMITGGRNAGRVGVIQRREKHIGSFEIVHLKDAAGQEFATRATNVFAIGTGSK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
P +SLPKGKGIKLSI++E
Sbjct: 234 PMISLPKGKGIKLSIVDE 251
>gi|402868885|ref|XP_003898513.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
Length = 263
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIVVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I N+E+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNKERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|12851918|dbj|BAB29207.1| unnamed protein product [Mus musculus]
Length = 263
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHMKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392882228|gb|AFM89946.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 215/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIILLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392884050|gb|AFM90857.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 215/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR++ G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRNILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|53933236|ref|NP_001005589.1| 40S ribosomal protein S4, X isoform [Danio rerio]
gi|82180997|sp|Q642H9.3|RS4X_DANRE RecName: Full=40S ribosomal protein S4, X isoform
gi|51980251|gb|AAH81584.1| Ribosomal protein S4, X-linked [Danio rerio]
Length = 263
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 215/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYP GFMDVVSI KT ENFRL+YD KGRF +H I +EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPTGFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FI
Sbjct: 121 -------YKLCKVRKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ MVTGG N GR+G+I NREKH GSF+ +H++D++G+ FATRL N+F IGKG K
Sbjct: 174 KFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKG++L+I EE KR A S++
Sbjct: 234 PWVSLPRGKGVRLTIAEERDKRLAAKQSSS 263
>gi|328769177|gb|EGF79221.1| hypothetical protein BATDEDRAFT_35382 [Batrachochytrium
dendrobatidis JAM81]
Length = 293
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/268 (66%), Positives = 214/268 (79%), Gaps = 8/268 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG KKHLKRLNAPKHWMLDKL G +APKPS+GPHK+RECLPLI+ +RNRL+YALT +E
Sbjct: 32 GRGPKKHLKRLNAPKHWMLDKLTGTWAPKPSAGPHKTRECLPLIVFIRNRLRYALTNQET 91
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
AI+ QR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YD KGRF +H I DEEAK
Sbjct: 92 KAIVNQRLIKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDVKGRFTIHRITDEEAK- 150
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR V+ GQK IPYI T+DGRTIRYPDPL+K NDT+K+D+ T K TE+IK
Sbjct: 151 ------YKLCKVRQVKIGQKAIPYIVTHDGRTIRYPDPLVKVNDTVKVDIATGKFTEYIK 204
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ VTGGRN GR+G+I +REKH G FE +HI+DA+ H FATR+ NVF +G+G +
Sbjct: 205 FDSGNIAYVTGGRNMGRIGVITHREKHHGGFEIVHIKDAVDHTFATRISNVFVVGQGNQS 264
Query: 242 WVSLPKGKGIKLSIIEE-ARKRQALATS 268
W+SLPKGKG+KL+I EE R+R+ L S
Sbjct: 265 WISLPKGKGVKLTISEERDRRREKLLAS 292
>gi|296212730|ref|XP_002752965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Callithrix jacchus]
Length = 263
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALIGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR++ +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRYIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|318037367|ref|NP_001187069.1| 40S ribosomal protein S4 [Ictalurus punctatus]
gi|50401280|sp|Q90YS0.3|RS4_ICTPU RecName: Full=40S ribosomal protein S4
gi|15294019|gb|AAK95186.1|AF402812_1 40S ribosomal protein S4 [Ictalurus punctatus]
Length = 263
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 215/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YD KGRF +H I +EEAK
Sbjct: 61 VKKICMQRFIKVDGKVRTDITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDP+IKANDT+++DLET KITEFI
Sbjct: 121 -------YKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
WVS+P+GKGI+L+I EE KR A S++
Sbjct: 234 AWVSIPRGKGIRLTIAEERDKRLAAKQSSS 263
>gi|392874404|gb|AFM86034.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDAVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|303289433|ref|XP_003064004.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454320|gb|EEH51626.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 258
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/263 (68%), Positives = 207/263 (78%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKLGG FAPKPS GPHK RECLPL LILRNRLKYALTY+E
Sbjct: 1 MPRGPKKHLKRLNAPSHWMLDKLGGVFAPKPSPGPHKQRECLPLCLILRNRLKYALTYKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR V VD K R DK YPAGFMDVVSI KT+E+FRL+YD KGRF +H I E+
Sbjct: 61 VTTILMQRLVKVDGKTRIDKCYPAGFMDVVSIDKTDEHFRLIYDQKGRFVVHRITQLES- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKVR+ + G KG+P +N +DGRTIRYPDP IK +DT+ +D+ +N IT
Sbjct: 120 ------QYKLCKVRTKKLGDKGVPCVNLHDGRTIRYPDPEIKESDTVMVDISSNTITNHF 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M+TGGRN GRVG+I+ REKHKGSFE IH+QDA GH+FATR NVF IG+G K
Sbjct: 174 KFDAGALAMITGGRNAGRVGVIQRREKHKGSFEIIHVQDAAGHQFATRATNVFVIGEGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
P VSLPKGKGIKLSI+EE KR+
Sbjct: 234 PMVSLPKGKGIKLSIVEELEKRK 256
>gi|402869907|ref|XP_003898985.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
Length = 263
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++LCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YQLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392874478|gb|AFM86071.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVRIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|62896517|dbj|BAD96199.1| ribosomal protein S4, X-linked X isoform variant [Homo sapiens]
Length = 263
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/270 (67%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392873332|gb|AFM85498.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392873708|gb|AFM85686.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392873792|gb|AFM85728.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392874658|gb|AFM86161.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392874704|gb|AFM86184.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875138|gb|AFM86401.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875380|gb|AFM86522.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875746|gb|AFM86705.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875962|gb|AFM86813.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876190|gb|AFM86927.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876292|gb|AFM86978.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876322|gb|AFM86993.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876546|gb|AFM87105.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878526|gb|AFM88095.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878612|gb|AFM88138.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878672|gb|AFM88168.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878808|gb|AFM88236.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878934|gb|AFM88299.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879118|gb|AFM88391.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879172|gb|AFM88418.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879522|gb|AFM88593.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879718|gb|AFM88691.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880066|gb|AFM88865.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880068|gb|AFM88866.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880320|gb|AFM88992.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880570|gb|AFM89117.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880610|gb|AFM89137.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392881410|gb|AFM89537.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882084|gb|AFM89874.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882130|gb|AFM89897.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882582|gb|AFM90123.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882678|gb|AFM90171.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883756|gb|AFM90710.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883898|gb|AFM90781.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883956|gb|AFM90810.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|348570508|ref|XP_003471039.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
porcellus]
Length = 263
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|301780256|ref|XP_002925549.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Ailuropoda
melanoleuca]
Length = 304
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 213/269 (79%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 43 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 102
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 103 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK- 161
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIK
Sbjct: 162 ------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 215
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KP
Sbjct: 216 FDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKP 275
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L+I EE KR A S+
Sbjct: 276 WISLPRGKGIRLTIAEERDKRLAAKQSSG 304
>gi|126722859|ref|NP_001075891.1| 40S ribosomal protein S4 [Bos taurus]
gi|126010823|gb|AAI33508.1| Ribosomal protein S4, Y-linked 1 [Bos taurus]
gi|296474500|tpg|DAA16615.1| TPA: ribosomal protein S4, Y-linked 1 [Bos taurus]
gi|440910374|gb|ELR60176.1| 40S ribosomal protein S4 [Bos grunniens mutus]
Length = 263
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI K ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|148229573|ref|NP_001090472.1| 40S ribosomal protein S4 [Xenopus laevis]
gi|117949829|sp|P49401.4|RS4_XENLA RecName: Full=40S ribosomal protein S4
gi|77748204|gb|AAI06701.1| MGC132392 protein [Xenopus laevis]
Length = 263
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITSEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|46048780|ref|NP_990439.1| 40S ribosomal protein S4 [Gallus gallus]
gi|1350995|sp|P47836.2|RS4_CHICK RecName: Full=40S ribosomal protein S4
gi|402296|gb|AAB59946.1| ribosomal protein S4 [Gallus gallus]
Length = 263
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|327287930|ref|XP_003228681.1| PREDICTED: 40S ribosomal protein S4-like [Anolis carolinensis]
Length = 263
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|281338943|gb|EFB14527.1| hypothetical protein PANDA_015068 [Ailuropoda melanoleuca]
Length = 263
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 213/269 (79%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIK
Sbjct: 121 ------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KP
Sbjct: 175 FDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKP 234
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L+I EE KR A S+
Sbjct: 235 WISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392873726|gb|AFM85695.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHL+RL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLRRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|213409335|ref|XP_002175438.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|213409962|ref|XP_002175751.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|212003485|gb|EEB09145.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|212003798|gb|EEB09458.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
Length = 262
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/265 (67%), Positives = 213/265 (80%), Gaps = 7/265 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHLKRVAAPSHWLLDKLSGTYAPKPSPGPHKARDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR V VD KVRTD T+PAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKAILMQRLVKVDGKVRTDATFPAGFMDVISIEKTGEHFRLVYDIKGRFTVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDT+KL+LE NKI F+
Sbjct: 121 -------YKLCKVKRVQLGAKGVPFVVTHDGRTIRYPDPLIKVNDTVKLNLENNKIESFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD ++VMVTGGRN GRVG++ +RE+H+GSFE +HI+DAL EFATRL NVF IG+ K
Sbjct: 174 KFDTSSMVMVTGGRNMGRVGVVTHRERHEGSFEIVHIKDALDREFATRLSNVFVIGEAGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
W+SLPKGKG+KLSI EE +R+AL
Sbjct: 234 AWISLPKGKGVKLSIAEERDRRRAL 258
>gi|417398042|gb|JAA46054.1| Putative 40s ribosomal protein s4 [Desmodus rotundus]
Length = 263
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/264 (68%), Positives = 212/264 (80%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI+++LET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQINLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKGI+L+I EE KR A
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLA 257
>gi|443722694|gb|ELU11454.1| hypothetical protein CAPTEDRAFT_152725 [Capitella teleta]
Length = 259
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/264 (67%), Positives = 213/264 (80%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG + HLKRL APKHWMLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALTY E
Sbjct: 1 MVRGPRMHLKRLAAPKHWMLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTYTE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ IL QR + VD KVRTDKTYPAGFMDV+SI +TNENFRL+YD KGRF +H I EEAK
Sbjct: 61 VMKILNQRLIKVDNKVRTDKTYPAGFMDVISIERTNENFRLIYDVKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+VR+++ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KI ++I
Sbjct: 121 -------YKLCRVRALKTGPKGVPFLTTHDARTIRYPDPLIKPNDTVQVDLATGKIKDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG+I +REKH GSF+ IH++D GH FATR+ NVF IGKG +
Sbjct: 174 KFDSGNLCMITGGRNLGRVGLITHREKHPGSFDIIHVKDTTGHIFATRMSNVFVIGKGNR 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
WVSLPKGKG+KLSI EE KR A
Sbjct: 234 AWVSLPKGKGVKLSIAEERDKRLA 257
>gi|392882682|gb|AFM90173.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+G+GI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGEGIRLAIAEERDKRLAAKQSSG 263
>gi|392884008|gb|AFM90836.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 EFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|45360467|ref|NP_988912.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|82186868|sp|Q6PBC4.3|RS4_XENTR RecName: Full=40S ribosomal protein S4
gi|38181707|gb|AAH59771.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|50416656|gb|AAH77671.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|89272957|emb|CAJ83152.1| ribosomal protein s4 x linked [Xenopus (Silurana) tropicalis]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392883816|gb|AFM90740.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGIKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|950115|gb|AAB01670.1| ribosomal protein S4, partial [Felis catus]
gi|440898938|gb|ELR50333.1| hypothetical protein M91_14309, partial [Bos grunniens mutus]
Length = 262
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 213/269 (79%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIK
Sbjct: 120 ------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KP
Sbjct: 174 FDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKP 233
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 WISLPRGKGIRLTIAEERDKRLAAKQSSG 262
>gi|392879752|gb|AFM88708.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ L+NRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLKNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|227229|prf||1617101C ribosomal protein S4
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++D G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDRNGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392881226|gb|AFM89445.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP + T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPRLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|147899358|ref|NP_001084941.1| 40S ribosomal protein S4 [Xenopus laevis]
gi|47122925|gb|AAH70591.1| MGC81176 protein [Xenopus laevis]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|126327259|ref|XP_001365342.1| PREDICTED: 40S ribosomal protein S4-like [Monodelphis domestica]
Length = 263
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLATHDARTIRYPDPLIKVNDTVQIDLEAGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|344281914|ref|XP_003412721.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Loxodonta
africana]
Length = 333
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 213/269 (79%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 72 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 131
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 132 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK- 190
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIK
Sbjct: 191 ------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 244
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KP
Sbjct: 245 FDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKP 304
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L+I EE KR A S+
Sbjct: 305 WISLPRGKGIRLTIAEERDKRLAAKQSSG 333
>gi|392878524|gb|AFM88094.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNREGHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|350536323|ref|NP_001232240.1| putative ribosomal protein S4 [Taeniopygia guttata]
gi|197127213|gb|ACH43711.1| putative ribosomal protein S4 [Taeniopygia guttata]
Length = 263
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|387018384|gb|AFJ51310.1| 40S ribosomal protein S4-like [Crotalus adamanteus]
Length = 263
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D K+RTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKIRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|395528794|ref|XP_003766510.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Sarcophilus
harrisii]
gi|395528796|ref|XP_003766511.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Sarcophilus
harrisii]
Length = 263
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLEAGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|395519902|ref|XP_003764080.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Sarcophilus
harrisii]
Length = 263
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392880372|gb|AFM89018.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 214/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLK+ALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKHALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392878002|gb|AFM87833.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+ I KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVIGIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|348540605|ref|XP_003457778.1| PREDICTED: 40S ribosomal protein S4-like [Oreochromis niloticus]
Length = 263
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/270 (65%), Positives = 215/270 (79%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE++KIT+FI
Sbjct: 121 -------YKLCKVKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLESSKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S++
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSS 263
>gi|392877122|gb|AFM87393.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+ RL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHLRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|351701775|gb|EHB04694.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 263
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/270 (67%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDVVSI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVVSIEKTGEHFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL + KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLASGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392883812|gb|AFM90738.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ VTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCTVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAIQSSG 263
>gi|296204918|ref|XP_002749534.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Callithrix jacchus]
Length = 263
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKHLKR+ APKHWMLDKL G FAP+PS+ PHK RECLP+I+ LRNRLKYALT E
Sbjct: 1 MAHGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTSPHKLRECLPIIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRIKPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPQGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392875924|gb|AFM86794.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD N+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTDNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392884390|gb|AFM91027.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITGFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+G+GI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGRGIRLTIAEERDKRLAAKQSSG 263
>gi|302846722|ref|XP_002954897.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300259872|gb|EFJ44096.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 261
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/268 (67%), Positives = 216/268 (80%), Gaps = 7/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKL G FAPKPS+GPHK RECLPL+LILRNRLKYALT +E
Sbjct: 1 MVRGPKKHLKRLNAPYHWMLDKLSGIFAPKPSAGPHKQRECLPLLLILRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQR V VD KVRTD TYP GFMDV+SI KT+E+FRL+ DTKGRF +H I EEA
Sbjct: 61 VQSILMQRLVKVDGKVRTDHTYPTGFMDVISIEKTDEHFRLVLDTKGRFVVHRISKEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+VR VQFG+ G+PY+ T+DGRT+RYPDP +KAND++ LD+ET KI E++
Sbjct: 120 ------AYKLCRVRKVQFGKGGVPYVATHDGRTVRYPDPEVKANDSVMLDIETGKIKEYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
K DVG +VMVTGG N GRVG I ++EKHKGSFE +HI+DA G+ FATRL N+F IGK K
Sbjct: 174 KNDVGALVMVTGGHNAGRVGKIVHKEKHKGSFEIVHIEDAAGNRFATRLTNIFVIGKEGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
P +SLPKGKGI+L+II+E +KR A++
Sbjct: 234 PLISLPKGKGIRLTIIQEQKKRYEAASA 261
>gi|432920853|ref|XP_004080003.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Oryzias
latipes]
Length = 263
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/264 (67%), Positives = 211/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PWVSLP+GKGI+L+I EE KR A
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLA 257
>gi|260808562|ref|XP_002599076.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
gi|229284352|gb|EEN55088.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
Length = 264
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/271 (66%), Positives = 209/271 (77%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APKHWMLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLAAPKHWMLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR + VD KVRTD+ YP+GFMDV++I KT ENFRL+YD KGRF +H I EEAK
Sbjct: 61 VKRILMQRLIKVDGKVRTDRCYPSGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G KGIP + T+D RTIRYPDP I+ ND++++D+ T KIT+ I
Sbjct: 121 -------YKLCKVRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGGRN GRVG++ NRE+H GSF+ +H++D GH FATRL N+F IG+G K
Sbjct: 174 KFDTGNVCMVTGGRNLGRVGLVTNRERHPGSFDIVHVKDTAGHTFATRLANIFIIGRGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGI LSI EE +R A+ + A
Sbjct: 234 PWVSLPKGKGIHLSIAEERDRRLAMKAATAV 264
>gi|348572544|ref|XP_003472052.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
porcellus]
Length = 263
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL + KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLASGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|159466042|ref|XP_001691218.1| ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158279190|gb|EDP04951.1| ribosomal protein S4 [Chlamydomonas reinhardtii]
Length = 261
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 213/262 (81%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKL G FAPKPS+GPHK RECLPL+LILRNRLKYALT +E
Sbjct: 1 MVRGPKKHLKRLNAPYHWMLDKLSGIFAPKPSAGPHKQRECLPLLLILRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +ILMQR V VD KVRTD TYP GFMDV+S+ KT+ENFRL+ DTKGRF +H I EEA
Sbjct: 61 VQSILMQRLVKVDGKVRTDHTYPTGFMDVISMEKTDENFRLVLDTKGRFVVHRISKEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+VR V+FG+ G+PY+ T+DGRTIRYPDP IKAND+I LD+ET KI EF+
Sbjct: 120 ------AYKLCRVRKVEFGKGGVPYVITHDGRTIRYPDPEIKANDSIMLDIETGKIKEFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
K DVG +VMVTGG N GRVG I ++EKHKGSFE +HI+DA G+ FATRL N+F IGK K
Sbjct: 174 KNDVGALVMVTGGHNAGRVGKIVHKEKHKGSFEIVHIEDAAGNRFATRLTNIFVIGKEGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P +SLPKGKGI+L+II+E +KR
Sbjct: 234 PLISLPKGKGIRLTIIQEQKKR 255
>gi|326917220|ref|XP_003204899.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
Length = 263
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+ EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTNAEERDKRLAAKQSSG 263
>gi|355757464|gb|EHH60989.1| Single copy abundant mRNA protein, partial [Macaca fascicularis]
Length = 263
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/269 (66%), Positives = 212/269 (78%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T D RTIRYPDPLIK NDTI++DLET KI++FIK
Sbjct: 121 ------YKLCKVRKIFVGTKGIPHLVTPDARTIRYPDPLIKVNDTIQIDLETGKISDFIK 174
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KP
Sbjct: 175 FDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKP 234
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L+I EE KR A S+
Sbjct: 235 WISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|395823987|ref|XP_003785255.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Otolemur garnettii]
gi|395823989|ref|XP_003785256.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Otolemur garnettii]
Length = 263
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 212/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G K IP++ T+D RTIRYPDPLIK NDTI++DLET KIT+F+
Sbjct: 121 -------YKLCKVRKIFVGTKEIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M TGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMATGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|339521943|gb|AEJ84136.1| 40S ribosomal protein S4 X isoform [Capra hircus]
Length = 263
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHW LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWKLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARPIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+G+GI+L+I EE KR+A S+
Sbjct: 234 PWISLPRGRGIRLTIAEERDKRRAAKQSSG 263
>gi|291383207|ref|XP_002708125.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 212/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL FAP+PS+GPHK RECLPLI+ LRN+LKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTSVFAPRPSTGPHKLRECLPLIIFLRNKLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRADITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|74136531|ref|NP_001028160.1| 40S ribosomal protein S4, Y isoform 1 [Monodelphis domestica]
gi|50401328|sp|O62739.3|RS4Y1_MONDO RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|3169291|gb|AAC32106.1| ribosomal protein S4 Y isoform [Monodelphis domestica]
Length = 263
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + KGIP++ T+D RTIRYPDPLIK NDT++++LET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392883806|gb|AFM90735.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT+E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTDEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTI YPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIHYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|392876638|gb|AFM87151.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
WVSLP+GKGI+L+I EE KR A S+
Sbjct: 234 LWVSLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|431838156|gb|ELK00088.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 264
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/264 (67%), Positives = 210/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD N+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTSNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKGI+L+I EE KR A
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLA 257
>gi|354832417|gb|AER42698.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 263
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/264 (67%), Positives = 211/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FI
Sbjct: 121 -------YKLCKVKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PWVSLP+GKGI+L+I EE KR A
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLA 257
>gi|297735624|emb|CBI18118.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/253 (75%), Positives = 197/253 (77%), Gaps = 48/253 (18%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVD KVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK FKLCKV+ VQF
Sbjct: 61 DKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK-------FKLCKVKGVQF 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
GQKGIPY+NTYDGRTIRYPDPLIKANDT
Sbjct: 114 GQKGIPYLNTYDGRTIRYPDPLIKANDT-------------------------------- 141
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
HKG+FETIH+QDA GHEFATRLGNVFTIGKGTKPWV+LPKGKGIKLSIIEE
Sbjct: 142 ---------HKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIKLSIIEE 192
Query: 259 ARKRQALATSAAA 271
A+KR A SA A
Sbjct: 193 AKKRLAAQASATA 205
>gi|74136523|ref|NP_001028159.1| 40S ribosomal protein S4, X isoform [Monodelphis domestica]
gi|50401327|sp|O62738.3|RS4X_MONDO RecName: Full=40S ribosomal protein S4, X isoform
gi|3169289|gb|AAC32105.1| ribosomal protein S4 X isoform [Monodelphis domestica]
Length = 263
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/264 (67%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDTTYPVGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR G K IP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKTFVGTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKGI+L+I EE KR A
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLA 257
>gi|109083806|ref|XP_001094914.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Macaca mulatta]
gi|297297972|ref|XP_002805099.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Macaca mulatta]
gi|297297974|ref|XP_002805100.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Macaca mulatta]
gi|297297976|ref|XP_002805101.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 4
[Macaca mulatta]
Length = 264
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/271 (66%), Positives = 214/271 (78%), Gaps = 8/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVVAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGF-MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
V I MQR + +D KVRTD TYPAGF MD++SI KT ENFRL+YDTKGRF +H I EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
K +KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+F
Sbjct: 121 K-------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDF 173
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
IKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FAT+L N+F IGKG
Sbjct: 174 IKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATQLSNIFVIGKGN 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
KPW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 KPWISLPRGKGIRLTIAEERDKRLAAKQSSG 264
>gi|159145754|gb|ABW90414.1| putative ribosomal protein S4 [Barentsia elongata]
Length = 259
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/257 (67%), Positives = 206/257 (80%), Gaps = 7/257 (2%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
+KHLKRLNAPKHWMLDK+GG FAP+PS+GPHK RECLPLIL +RNRLKYALTY E I+
Sbjct: 5 RKHLKRLNAPKHWMLDKMGGNFAPRPSTGPHKLRECLPLILFIRNRLKYALTYDEAKKIM 64
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
QR V VD KVRTD YP+GFMDV+SI +TNENFRL+YD KGRF +H I EEAK
Sbjct: 65 NQRLVKVDGKVRTDICYPSGFMDVISIERTNENFRLVYDVKGRFAVHRISGEEAK----- 119
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLCKVR V KG+PY+ T+D RTIRYPDPL+K NDT+++DL T KI +FIKFD G
Sbjct: 120 --YKLCKVRKVSVAPKGVPYLTTHDARTIRYPDPLVKMNDTVQVDLSTGKIKDFIKFDSG 177
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
N+ ++TGGRN GRVG++ +REKH GSF+ +HI+DA+GH FATR NVF IGKG KPW+SL
Sbjct: 178 NLCLITGGRNTGRVGVVTHREKHPGSFDIVHIKDAVGHNFATRASNVFIIGKGNKPWISL 237
Query: 246 PKGKGIKLSIIEEARKR 262
PKGKG+KLSI EE +R
Sbjct: 238 PKGKGVKLSIAEERDRR 254
>gi|320582410|gb|EFW96627.1| 40S ribosomal protein S4 [Ogataea parapolymorpha DL-1]
Length = 262
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/267 (68%), Positives = 213/267 (79%), Gaps = 8/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL APKHWMLDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPKHWMLDKLSGVYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDSTFPAGFMDVITLEATNENFRLIYDVKGRFAVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDP IK NDT+K+DLET KIT+F+
Sbjct: 120 ------SYKLGKVKKVQLGKKGIPYVVTHDGRTIRYPDPAIKVNDTVKIDLETGKITDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I N+E+H+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVITNKERHEGGFDLVHIKDALENTFVTRLSNVFVIGAEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQALA 266
KP+VSLPKGKGIKLSI EE +R+ALA
Sbjct: 234 KPYVSLPKGKGIKLSIAEERDRRRALA 260
>gi|296484165|tpg|DAA26280.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 262
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 212/270 (78%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EEAK
Sbjct: 61 V-KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAK 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 120 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 173 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR S+
Sbjct: 233 PWISLPRGKGIRLTIAEERDKRLVAKQSSG 262
>gi|19112469|ref|NP_595677.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|26006874|sp|Q9USW5.1|RS4B_SCHPO RecName: Full=40S ribosomal protein S4-B
gi|6018736|emb|CAB57920.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 208/265 (78%), Gaps = 7/265 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKAILMQRLIQVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FI
Sbjct: 121 -------YKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K
Sbjct: 174 KFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
W+SLPKGKG+KLSI EE +R+AL
Sbjct: 234 SWISLPKGKGVKLSITEERDRRRAL 258
>gi|452823075|gb|EME30088.1| 40S ribosomal protein S4e [Galdieria sulphuraria]
Length = 262
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/261 (68%), Positives = 210/261 (80%), Gaps = 7/261 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH+KRL APKHWML KLGG +AP+PSSGPHK RE LPL+LILRNRLKYAL RE
Sbjct: 1 MPRGPKKHMKRLAAPKHWMLSKLGGIWAPRPSSGPHKLRESLPLLLILRNRLKYALNNRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+AILMQR V VD KVRTDKT+PAGFMDV+ + +TNE FRLLYD KGRFRLH I EE K
Sbjct: 61 AVAILMQRLVKVDGKVRTDKTFPAGFMDVIELERTNETFRLLYDVKGRFRLHRITPEEGK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ Q G +GIPYI T+DGRTIRYPDP IK NDT+ LDLET K+T+F+
Sbjct: 121 -------YKLCRVKRAQMGVRGIPYIATHDGRTIRYPDPAIKHNDTVVLDLETGKVTDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VGN+ M+TGG N GRVG+I++REKH GS E IH++DA G EFAT+L NVF IGKG +
Sbjct: 174 KFEVGNLCMITGGHNIGRVGLIQHREKHPGSTEIIHVRDARGQEFATQLNNVFVIGKGNQ 233
Query: 241 PWVSLPKGKGIKLSIIEEARK 261
P+VSLPKGKGI+ SI+EE K
Sbjct: 234 PFVSLPKGKGIRFSILEEQEK 254
>gi|296485647|tpg|DAA27762.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 210/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+ KT ENFRL+YDT GRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVIRTDKTGENFRLIYDTTGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVTGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|196005203|ref|XP_002112468.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190584509|gb|EDV24578.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 210/262 (80%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL+APKHWMLDKL G+FAP+PS GPHK RECLPL + +RNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLHAPKHWMLDKLSGSFAPRPSCGPHKFRECLPLAIFMRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + +D KVRTD TYPAGFMDV++I KT ENFRLLYD KGRF +H I EEA
Sbjct: 61 VKKIVKQRLIKIDGKVRTDITYPAGFMDVIAIEKTGENFRLLYDAKGRFTVHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ +Q G KGIPY T+D RTIRYPDPL+K NDTIK+DL++ KIT+F+
Sbjct: 120 ------SYKLCKVKQLQIGAKGIPYAVTHDARTIRYPDPLVKVNDTIKVDLKSGKITDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN VM GGRN GR+G+I +RE+H GSF+ +H++DA G+ FATRL NVF IGKGTK
Sbjct: 174 KFDSGNQVMAIGGRNMGRIGVITHRERHSGSFDIVHVKDAQGNAFATRLTNVFVIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P+VSLP+GKGI+L+I EE KR
Sbjct: 234 PYVSLPRGKGIRLTIAEERDKR 255
>gi|384252070|gb|EIE25547.1| ribosomal protein S4 component of cytosolic 80S ribosome and 40S
small subunit [Coccomyxa subellipsoidea C-169]
Length = 260
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/264 (68%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKLGG FAPKPS GPHK RECLPL L+LRNRLKYALT +E
Sbjct: 1 MVRGPKKHLKRLNAPSHWMLDKLGGIFAPKPSPGPHKQRECLPLTLMLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V++ILMQR V VD KVRTD TYPAGFMDV+ I KT+E+FRL+YD+KGRF H I EEA
Sbjct: 61 VVSILMQRLVRVDGKVRTDATYPAGFMDVIDIEKTDEHFRLIYDSKGRFVTHRITKEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV Q G+ G+PYI T+DGRTIRYPDP IK NDT+ D+ET KI +FI
Sbjct: 120 ------GYKLLKVTRQQVGKGGVPYIATHDGRTIRYPDPDIKVNDTVMFDIETGKIKDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVG +VMVTGGRN GRVG I NR+KHKGSF+ I ++D++GH+FATRL NVF IGK K
Sbjct: 174 KFDVGQLVMVTGGRNVGRVGTIVNRQKHKGSFDIIVVKDSVGHQFATRLSNVFIIGKDEK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P +SLPKGKG++L I++E KR A
Sbjct: 234 PLISLPKGKGVRLDILQEQAKRDA 257
>gi|19113142|ref|NP_596350.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|6094182|sp|P87158.2|RS4A_SCHPO RecName: Full=40S ribosomal protein S4-A
gi|3150141|emb|CAA19128.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 208/265 (78%), Gaps = 7/265 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKAILMQRLIKVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FI
Sbjct: 121 -------YKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K
Sbjct: 174 KFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
W+SLPKGKG+KLSI EE +R+AL
Sbjct: 234 SWISLPKGKGVKLSITEERDRRRAL 258
>gi|389608137|dbj|BAM17680.1| ribosomal protein S4 [Papilio xuthus]
gi|389610695|dbj|BAM18959.1| ribosomal protein S4 [Papilio polytes]
Length = 263
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/272 (65%), Positives = 217/272 (79%), Gaps = 9/272 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+ QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR+V G K +PY+ T+DGRT+RYPDPLIK ND+I+LD+ T+KI +FI
Sbjct: 121 -------YKLCKVRAVGTGPKSVPYLVTHDGRTVRYPDPLIKVNDSIQLDIATSKIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATR+ NVF IGKGTK
Sbjct: 174 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIRDSTGHTFATRMNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
++SLP+GKG++L+I EE KR +A AAQ
Sbjct: 234 AYISLPRGKGVRLTIAEERDKR--IAAKVAAQ 263
>gi|440901836|gb|ELR52713.1| 40S ribosomal protein S4, partial [Bos grunniens mutus]
Length = 271
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 207/261 (79%), Gaps = 7/261 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 18 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 77
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 78 VKKICMQHFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAK 137
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 138 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 190
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG K
Sbjct: 191 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNK 250
Query: 241 PWVSLPKGKGIKLSIIEEARK 261
PW+SLP+GKGI L+I EE K
Sbjct: 251 PWISLPRGKGICLTIAEERDK 271
>gi|19115086|ref|NP_594174.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|26006873|sp|Q9P4W9.1|RS4C_SCHPO RecName: Full=40S ribosomal protein S4-C
gi|8247670|emb|CAB93014.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 208/265 (78%), Gaps = 7/265 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKAILMQRLIKVDGKVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FI
Sbjct: 121 -------YKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K
Sbjct: 174 KFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
W+SLPKGKG+KLSI EE +R+AL
Sbjct: 234 SWISLPKGKGVKLSITEERDRRRAL 258
>gi|112984078|ref|NP_001037257.1| 40S ribosomal protein S4 [Bombyx mori]
gi|74782218|sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4
gi|54609289|gb|AAV34860.1| ribosomal protein S4 [Bombyx mori]
Length = 263
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/272 (66%), Positives = 215/272 (79%), Gaps = 9/272 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+ QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ T KI +FI
Sbjct: 121 -------YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKGTK
Sbjct: 174 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
++SLP+GKGI+L+I EE KR +A AAQ
Sbjct: 234 AYISLPRGKGIRLTIAEERDKR--IAAKVAAQ 263
>gi|291239929|ref|XP_002739871.1| PREDICTED: ribosomal protein S4, X-linked-like [Saccoglossus
kowalevskii]
Length = 269
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/263 (67%), Positives = 208/263 (79%), Gaps = 7/263 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRLNAPKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 10 ARGPKKHLKRLNAPKHWMLDKLTGKFAPRPSTGPHKLRECLPLIIFLRNRLKYALTCDET 69
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+MQR + +D KVRTD TYPAGFMDV++I KT ENFRL++D KGRF H I +EEAK
Sbjct: 70 KKIVMQRLIKIDGKVRTDITYPAGFMDVITIEKTGENFRLIFDVKGRFTTHRITNEEAK- 128
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ V KG+PY+ T+D RTIRYPDPLIK NDT K+D+ T KIT+FIK
Sbjct: 129 ------YKLCKVKKVGIAPKGVPYLVTHDARTIRYPDPLIKVNDTTKVDISTGKITDFIK 182
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GNV M+TGGRN GRVG+I +RE+H GSF+ +H++D LGH FATRL NVF IGKG KP
Sbjct: 183 FDSGNVCMITGGRNLGRVGLITHRERHPGSFDIVHVKDNLGHTFATRLTNVFVIGKGNKP 242
Query: 242 WVSLPKGKGIKLSIIEEARKRQA 264
W+SL KGKGI+L+I EE KR A
Sbjct: 243 WISLAKGKGIRLTIAEERDKRIA 265
>gi|410906839|ref|XP_003966899.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Takifugu
rubripes]
Length = 263
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 212/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DL+T KIT+FI
Sbjct: 121 -------YKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD N+ MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG K
Sbjct: 174 KFDTSNMCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A +++
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLAAKQASS 263
>gi|380815402|gb|AFE79575.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 210/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKG++L+I EE KR A S+
Sbjct: 234 PWISLPRGKGVRLTIAEERDKRLATKQSSG 263
>gi|90820002|gb|ABD98758.1| putative ribosomal protein S4e [Graphocephala atropunctata]
Length = 263
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/271 (67%), Positives = 217/271 (80%), Gaps = 9/271 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL+APK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLHAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD K+RTD YPAGFMDVV+I KT E FRL+YD KGRF +H I +EEAK
Sbjct: 61 VKKIVMQRLIKVDGKIRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITEEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI+LD+ ++KIT++I
Sbjct: 121 -------YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIQLDIASSKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D GH FATRL NVF IGKGTK
Sbjct: 174 RFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDTNGHTFATRLVNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
P+VSLPKGKG+KLSI EE KR LA AA+
Sbjct: 234 PYVSLPKGKGVKLSIAEERDKR--LAAKAAS 262
>gi|440912198|gb|ELR61790.1| hypothetical protein M91_18687, partial [Bos grunniens mutus]
Length = 278
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/264 (67%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 19 MARGPKKHLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 78
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 79 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 138
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 139 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 191
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG K
Sbjct: 192 KFDTGNLCMVTGGANLGRIGVITNRERHLGSFDVVHVKDANGNSFATRLSNIFVTGKGNK 251
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SL +GKGI+L+I EE KR A
Sbjct: 252 PWISLHRGKGIRLTIAEERDKRLA 275
>gi|315115407|gb|ADT80676.1| ribosomal protein S4 [Euphydryas aurinia]
Length = 263
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/269 (66%), Positives = 214/269 (79%), Gaps = 7/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+ QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ T+KI +FI
Sbjct: 121 -------YKLCKVRHVGTGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATSKIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKGTK
Sbjct: 174 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
++SLP+GKG++L+I EE KR A +A
Sbjct: 234 AYISLPRGKGVRLTIAEERDKRIAAKVAA 262
>gi|291400837|ref|XP_002716797.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/264 (67%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVTAPKHWMLDKLTSVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+S+ KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISVDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ H++D G+ FAT L N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANMGRIGVITNRERHPGSFDVAHVKDVNGNSFATWLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKGI+L+I EE KR A
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLA 257
>gi|340521624|gb|EGR51858.1| hypothetical protein TRIREDRAFT_74568 [Trichoderma reesei QM6a]
Length = 259
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/266 (66%), Positives = 214/266 (80%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGLYAPKPSPGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR V VDAKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIMMQRLVKVDAKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGNVAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KL+I EE +R+ALA
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRALA 258
>gi|395546360|ref|XP_003775056.1| PREDICTED: 40S ribosomal protein S4, X isoform [Sarcophilus
harrisii]
Length = 291
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/263 (67%), Positives = 208/263 (79%), Gaps = 7/263 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 30 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 89
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVRTD TYP GFMDV+SI KT E FRL+YDTKGRF +H I EEAK
Sbjct: 90 KKICMQRFIKIDGKVRTDTTYPVGFMDVISIEKTGEYFRLIYDTKGRFAVHRITAEEAK- 148
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR G KGIP++ T+D RTIRYPDPLI+ NDTI++DLET KIT+FIK
Sbjct: 149 ------YKLCKVRKTFVGTKGIPHLVTHDARTIRYPDPLIRVNDTIQIDLETGKITDFIK 202
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MVTGG N GR+G++ NREKH GSF+ +H++DA G+ FATRL N+F IGKG KP
Sbjct: 203 FDTGNLCMVTGGANLGRIGVVTNREKHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKP 262
Query: 242 WVSLPKGKGIKLSIIEEARKRQA 264
W+SLP+GKGI+L+I EE KR A
Sbjct: 263 WISLPRGKGIRLTIAEERDKRLA 285
>gi|158187698|gb|ABW23138.1| ribosomal protein rps4 [Arenicola marina]
Length = 262
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/263 (66%), Positives = 210/263 (79%), Gaps = 7/263 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG + HLKRL+APKHWMLDKLGG FAPKPS+GPHK+RECLP+++ LRNRLKYALTY EV
Sbjct: 3 VRGRRNHLKRLHAPKHWMLDKLGGVFAPKPSTGPHKTRECLPMMIFLRNRLKYALTYTEV 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ QR + VD KVRTDKTYP GFMDV++I KT ENFRL+YD KGRF +H I EEAK
Sbjct: 63 KKIVNQRLIKVDGKVRTDKTYPCGFMDVITIEKTGENFRLIYDVKGRFAVHRISAEEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ G KG+P++ T+DGRTIRYPDPL+K NDTI++D+ + KI EFIK
Sbjct: 122 ------YKLCKVKKGLVGLKGVPHLVTHDGRTIRYPDPLVKVNDTIQVDIASGKIKEFIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GNV M+TGGRN GRVG I +RE+H GSF+ +HI+D++GH FATRL NVF IGKG KP
Sbjct: 176 FDSGNVCMITGGRNLGRVGTITHRERHPGSFDVVHIKDSMGHTFATRLNNVFVIGKGLKP 235
Query: 242 WVSLPKGKGIKLSIIEEARKRQA 264
WVSLP G+G+KL+I EE +R A
Sbjct: 236 WVSLPGGRGLKLTIAEERDRRIA 258
>gi|209733632|gb|ACI67685.1| 40S ribosomal protein S4 [Salmo salar]
gi|209736494|gb|ACI69116.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/270 (65%), Positives = 211/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE I
Sbjct: 120 ------QYKLCKVKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A ++
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRIAAKAGSS 263
>gi|387539852|gb|AFJ70553.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 210/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKG++L+I EE KR A S+
Sbjct: 234 PWISLPRGKGVRLTIAEERDKRLAAKQSSG 263
>gi|296192615|ref|XP_002744145.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Callithrix jacchus]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 212/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV++I K ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVITINKMGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE++ GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERYPGSFDAVHVKDANGNSFATRLPNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I E KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEGRDKRLAAKQSSG 263
>gi|380815400|gb|AFE79574.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 209/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLATKQSSG 263
>gi|380815404|gb|AFE79576.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 209/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKG++L+I EE KR A S+
Sbjct: 234 PWISLPRGKGVRLTIAEERDKRLATKQSSG 263
>gi|225716876|gb|ACO14284.1| 40S ribosomal protein S4, X isoform [Esox lucius]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 211/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV+ + G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE I
Sbjct: 120 ------QYKLCKVKKLLVGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNLFATRLGNIFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A ++
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRIAAKAGSS 263
>gi|408392754|gb|EKJ72074.1| hypothetical protein FPSE_07699 [Fusarium pseudograminearum CS3096]
Length = 261
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/268 (65%), Positives = 216/268 (80%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR V VD KVRTD T+P+GFMDV++I KT ENFRL+YDTKGRF +H I++EEA
Sbjct: 61 VKAILMQRLVKVDGKVRTDSTFPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G VVMVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAVVMVTGGRNMGRVGVITHRERHDGGFNIVHVKDAIDNSFATRESNVFIIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KL+I EE +R+A A S
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAYAIS 260
>gi|380815398|gb|AFE79573.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 209/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKG++L+I EE KR A S+
Sbjct: 234 PWISLPRGKGVRLTIAEERDKRLAAKQSSG 263
>gi|91083095|ref|XP_969262.1| PREDICTED: similar to ribosomal protein S4e [Tribolium castaneum]
gi|270006993|gb|EFA03441.1| hypothetical protein TcasGA2_TC013431 [Tribolium castaneum]
Length = 261
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/268 (67%), Positives = 212/268 (79%), Gaps = 7/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KGIP++ T DGRTIRYPDP+IK NDTI+L++ T+KI +FI
Sbjct: 121 -------YKLCKVKKVQTGPKGIPFLVTRDGRTIRYPDPMIKVNDTIQLEIATSKILDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG + +RE+H GSF+ +HI+DA GH FATRL NVF IGKG+K
Sbjct: 174 KFESGNLCMITGGRNLGRVGTVVSRERHPGSFDIVHIKDANGHTFATRLNNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
P+VSLP+GKG+KLSI EE KR A T
Sbjct: 234 PYVSLPRGKGVKLSIAEERDKRLAAKTQ 261
>gi|355704916|gb|EHH30841.1| Single copy abundant mRNA protein, partial [Macaca mulatta]
Length = 263
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/269 (66%), Positives = 210/269 (78%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 61
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 62 KKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIK
Sbjct: 121 ------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MVTGG N GR+G+I NRE+H SF+ H +DA G+ FATRL N+F IGKG KP
Sbjct: 175 FDTGNLCMVTGGANLGRIGVITNRERHPASFDGGHGKDANGNSFATRLSNIFVIGKGNKP 234
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L+I EE KR A S+
Sbjct: 235 WISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|124300793|dbj|BAF45892.1| ribosomal protein S4 [Solea senegalensis]
Length = 263
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/264 (67%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKH MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHGMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEYFRLIYDVKGRFTVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KITEFI
Sbjct: 121 -------YKLCKVKKLLVGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PWVSLP+GKGI+L+I EE KR A
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRLA 257
>gi|148680472|gb|EDL12419.1| mCG124430 [Mus musculus]
Length = 263
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 211/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKR+ APKHW+LDKL G FAP PS+GPHK RECLPLI+ LRNRLKYAL E
Sbjct: 1 MTRGPKKHLKRVAAPKHWILDKLTGVFAPGPSTGPHKLRECLPLIIFLRNRLKYALNGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I +QR + +D KVRTD TYPAGFMDV+SI K ENFRL+YDTKGRF +H I EEA
Sbjct: 61 VKKICVQRFIKIDGKVRTDITYPAGFMDVISIDKNRENFRLIYDTKGRFAVHRITLEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKVR + G KGIP++ T+DGRTIRYPDPLIK NDTI++DLET K+T+FI
Sbjct: 120 ------QYKLCKVRKIFVGTKGIPHLVTHDGRTIRYPDPLIKVNDTIQIDLETGKVTDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDASGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKG++L+I EE KR A ++
Sbjct: 234 PWISLPRGKGVRLTIAEERDKRLAAKQNSG 263
>gi|322701348|gb|EFY93098.1| ribosomal protein S4 [Metarhizium acridum CQMa 102]
Length = 261
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 213/268 (79%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+CLPLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCLPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLVKVDGKVRTDMTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G V MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAVAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KL+I EE +R+A A S
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAYAQS 260
>gi|195022457|ref|XP_001985577.1| GH17143 [Drosophila grimshawi]
gi|193899059|gb|EDV97925.1| GH17143 [Drosophila grimshawi]
Length = 261
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 211/267 (79%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGGAFAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGAFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR Q G KG+P++ T+DGRTIRYPDPL+ ANDT+++D+ + KIT++I
Sbjct: 121 -------YKLCKVRKTQLGAKGVPFLVTHDGRTIRYPDPLVHANDTVQVDIASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSISEERDKRLAAKT 260
>gi|342879232|gb|EGU80487.1| hypothetical protein FOXB_08947 [Fusarium oxysporum Fo5176]
Length = 261
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/268 (65%), Positives = 214/268 (79%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYP+GFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLVKVDGKVRTDSTYPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G VVMVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAVVMVTGGRNMGRVGVITHRERHDGGFNIVHVKDAIDNSFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KL+I EE +R+A A S
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAYAIS 260
>gi|146285351|gb|ABQ18253.1| ribosomal protein S4e [Lygus lineolaris]
Length = 263
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/271 (66%), Positives = 213/271 (78%), Gaps = 9/271 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG K+HLKRLNAPK WMLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKRHLKRLNAPKSWMLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTKDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGR+ +H I +EAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRYAIHRITADEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G KGIP++ T+DGRTIRYPDPL K NDTI+LD+ TNKI + I
Sbjct: 121 -------YKLCKVRKVQTGPKGIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATNKIIDII 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+ D GN+ M+TGGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG+K
Sbjct: 174 RMDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHVKDATGHTFATRLNNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
+VS+PKGKGIKLSI EE +R LA AA+
Sbjct: 234 AYVSIPKGKGIKLSIAEERDRR--LAAKAAS 262
>gi|50403757|sp|P79183.3|RS4Y1_MACFU RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|6519826|dbj|BAA87933.1| ribosomal protein S4Y (RPS4Y) [Macaca fuscata]
Length = 263
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 209/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|291395508|ref|XP_002714210.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 210/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKH KR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MACGPKKHPKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG F +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGCFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FAT L N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATWLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPQGKGIRLTIAEERDKRLAAKQSSG 263
>gi|157690730|tpe|CAL69092.1| TPA: putative 40S ribosomal protein S4 [Spadella cephaloptera]
Length = 260
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KH+KR+ AP HWMLDKLGG +AP+PSSGPHK RECLPL L LRNRLKYALTY E
Sbjct: 1 MVRGPRKHMKRVAAPNHWMLDKLGGCYAPRPSSGPHKLRECLPLALFLRNRLKYALTYSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL QR V VD +VRTD T+P GFMDVV + KT ENFRL+YD KGR+++H I EEA
Sbjct: 61 VKKILAQRLVKVDGRVRTDHTFPTGFMDVVQMEKTGENFRLIYDVKGRYKVHRISKEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC V+ V G KGIPY+ T DGRTIRYPDPLIK+ND IK+D+ TNKIT++I
Sbjct: 120 ------LYKLCIVKKVSVGPKGIPYLTTTDGRTIRYPDPLIKSNDCIKVDIATNKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GNV MVTGGRN GRVGII +R +H GSF+ +H++DA GH FATRL +FTIGKG+K
Sbjct: 174 KFESGNVAMVTGGRNLGRVGIIMHRGRHPGSFDIVHVKDAAGHSFATRLNYIFTIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PWVSLP+GKGI++++ EE KR A
Sbjct: 234 PWVSLPEGKGIRMTVAEERDKRIA 257
>gi|3724352|dbj|BAA33778.1| ribosomal protein S4 [Schizosaccharomyces pombe]
Length = 260
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/263 (68%), Positives = 207/263 (78%), Gaps = 7/263 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV
Sbjct: 1 RGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVK 60
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
AILMQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 AILMQRLIKVDGKVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAK-- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKF
Sbjct: 119 -----YKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKF 173
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
D VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W
Sbjct: 174 DTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSW 233
Query: 243 VSLPKGKGIKLSIIEEARKRQAL 265
+SLPKGKG+KLSI EE +R+AL
Sbjct: 234 ISLPKGKGVKLSITEERDRRRAL 256
>gi|125979105|ref|XP_001353585.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
gi|195161167|ref|XP_002021441.1| GL25330 [Drosophila persimilis]
gi|54642349|gb|EAL31098.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
gi|194118554|gb|EDW40597.1| GL25330 [Drosophila persimilis]
Length = 261
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/267 (66%), Positives = 212/267 (79%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGGAFAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGAFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYPAGFMDV+++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGFMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ T KIT++I
Sbjct: 121 -------YKLCKVKKNQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSISEERDKRLAAKT 260
>gi|195128197|ref|XP_002008552.1| GI11752 [Drosophila mojavensis]
gi|193920161|gb|EDW19028.1| GI11752 [Drosophila mojavensis]
Length = 261
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/267 (66%), Positives = 210/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ T KIT++I
Sbjct: 121 -------YKLCKVRKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGSVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSISEERDKRLAAKT 260
>gi|195377379|ref|XP_002047468.1| GJ13462 [Drosophila virilis]
gi|194154626|gb|EDW69810.1| GJ13462 [Drosophila virilis]
Length = 261
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 210/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR Q G KG+P++ T+DGRTIRYPDPL+ ANDT+++D+ T KIT++I
Sbjct: 121 -------YKLCKVRKTQLGAKGVPFLVTHDGRTIRYPDPLVHANDTVQVDIATGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSISEERDKRLAAKT 260
>gi|344229651|gb|EGV61536.1| hypothetical protein CANTEDRAFT_124333 [Candida tenuis ATCC 10573]
gi|344232943|gb|EGV64816.1| ribosomal protein S4e [Candida tenuis ATCC 10573]
Length = 262
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/265 (67%), Positives = 213/265 (80%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQ+HV VD KVRTD T+PAGFMDV+S+ TNENFRL+YDTKGRF +H I +EEA
Sbjct: 61 TKAILMQQHVKVDGKVRTDATFPAGFMDVISLEATNENFRLIYDTKGRFAVHRITNEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++GIPY T+DGRTIRYPDP IKANDT+K+DLET KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKRGIPYAVTHDGRTIRYPDPAIKANDTVKIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVIVHRERHEGGFDLVHIKDSLENTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KP+VSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPYVSLPKGKGIKLSISEERDRRRA 258
>gi|344232944|gb|EGV64817.1| hypothetical protein CANTEDRAFT_113586 [Candida tenuis ATCC 10573]
Length = 827
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/265 (67%), Positives = 213/265 (80%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQ+HV VD KVRTD T+PAGFMDV+S+ TNENFRL+YDTKGRF +H I +EEA
Sbjct: 61 TKAILMQQHVKVDGKVRTDATFPAGFMDVISLEATNENFRLIYDTKGRFAVHRITNEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++GIPY T+DGRTIRYPDP IKANDT+K+DLET KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKRGIPYAVTHDGRTIRYPDPAIKANDTVKIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVIVHRERHEGGFDLVHIKDSLENTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KP+VSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPYVSLPKGKGIKLSISEERDRRRA 258
>gi|268306408|gb|ACY95325.1| ribosomal protein S4 [Manduca sexta]
Length = 263
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 214/272 (78%), Gaps = 9/272 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+ QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ T KI +FI
Sbjct: 121 -------YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG + +RE+H GSF+ +H++DA GH FATRL NVF IGKGTK
Sbjct: 174 KFESGNLCMITGGRNLGRVGTLVSRERHPGSFDIVHVRDATGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
++SLP+GKG++L+I EE KR +A A Q
Sbjct: 234 AYISLPRGKGVRLTIAEERDKR--IAAKVAGQ 263
>gi|227206132|dbj|BAH57121.1| AT5G07090 [Arabidopsis thaliana]
Length = 197
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/206 (87%), Positives = 189/206 (91%), Gaps = 9/206 (4%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 1 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK----- 55
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVG
Sbjct: 56 --FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
NVVMVTGGRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSL
Sbjct: 114 NVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSL 173
Query: 246 PKGKGIKLSIIEEARKRQALATSAAA 271
PKGKGIKL+IIEEARKR LA+ AA
Sbjct: 174 PKGKGIKLTIIEEARKR--LASQQAA 197
>gi|344302425|gb|EGW32699.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
Length = 262
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 177/265 (66%), Positives = 213/265 (80%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ+HV VDAKVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQQHVKVDAKVRTDSTFPAGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++G+PY+ T+DGRTIRYPDPLIKANDT+K+DL T KI++FI
Sbjct: 120 ------SYKLGKVKKVQLGKRGVPYVVTHDGRTIRYPDPLIKANDTVKIDLATGKISDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRT 258
>gi|326512954|dbj|BAK03384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 213/268 (79%), Gaps = 11/268 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KR+ AP HWMLDK+ G FAP+PS+GPHK RECLPLI++LRNRL+YALT E
Sbjct: 1 MARGPKKHMKRIAAPSHWMLDKMSGVFAPRPSAGPHKLRECLPLIILLRNRLRYALTRTE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + +D KVRTD TYP GF DVV+I KT ENFRLL+DTKGRF + I EEAK
Sbjct: 61 VTKIVMQRLIKIDGKVRTDGTYPCGFQDVVTIDKTGENFRLLFDTKGRFVVQPISSEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G++GIP+I T+DGR IRYPDPLIKAND++KLDLE+ KIT+F+
Sbjct: 121 -------YKLCKVKRVTVGKEGIPFITTHDGRNIRYPDPLIKANDSVKLDLESGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-- 238
KFD+G VVMVTGGRN GRVG+I +RE+H GSF+ +HI+DA+G+ FATRLGNVF IGK
Sbjct: 174 KFDIGQVVMVTGGRNMGRVGVIVHRERHLGSFDIVHIKDAVGNTFATRLGNVFVIGKSDG 233
Query: 239 --TKPWVSLPKGKGIKLSIIEEARKRQA 264
TK +SLPK KGIK SI+EEA R A
Sbjct: 234 KTTKALISLPKAKGIKKSILEEAAARLA 261
>gi|223646190|gb|ACN09853.1| 40S ribosomal protein S4 [Salmo salar]
gi|223672037|gb|ACN12200.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 177/270 (65%), Positives = 209/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV+ G KG+P + T+D RTIRYPDPLIK NDT+++DL T KITE I
Sbjct: 120 ------QYKLCKVKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L I EE KR A ++
Sbjct: 234 PWVSLPRGKGIRLPIAEERDKRIAAKAGSS 263
>gi|322705490|gb|EFY97075.1| ribosomal protein S4 [Metarhizium anisopliae ARSEF 23]
Length = 261
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/268 (65%), Positives = 212/268 (79%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+CLPLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCLPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLVKVDGKVRTDMTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G V MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAVAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KL+I EE +R+A S
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAYTQS 260
>gi|358384887|gb|EHK22484.1| hypothetical protein TRIVIDRAFT_84016 [Trichoderma virens Gv29-8]
Length = 259
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 213/266 (80%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGLYAPKPSPGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR V VDAKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIMMQRLVKVDAKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G V MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAVAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KL+I EE +R+ALA
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRALA 258
>gi|254573092|ref|XP_002493655.1| 40S ribosomal protein S4 [Komagataella pastoris GS115]
gi|238033454|emb|CAY71476.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328354517|emb|CCA40914.1| 40S ribosomal protein S4 [Komagataella pastoris CBS 7435]
Length = 282
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/263 (67%), Positives = 209/263 (79%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVQVDGKVRTDATFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDP IK ND+IK+DL T KI +F+
Sbjct: 120 ------TYKLGKVKKVQLGKKGIPYLVTHDGRTIRYPDPDIKVNDSIKIDLATGKILDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVG +VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL ++F TRL NVF IG+
Sbjct: 174 KFDVGKLVMVTGGRNLGRVGVITHREKHEGGFDLVHIKDALENQFVTRLSNVFIIGEANA 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
P +SLPKGKGIKLSI EE +R+
Sbjct: 234 PIISLPKGKGIKLSIAEERDQRR 256
>gi|225703238|gb|ACO07465.1| 40S ribosomal protein S4 [Oncorhynchus mykiss]
Length = 263
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/264 (66%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE I
Sbjct: 120 ------QYKLCKVKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PWVSLP+GKGI+L+I EE KR A
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRIA 257
>gi|259089395|ref|NP_001158523.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
gi|225704068|gb|ACO07880.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
Length = 263
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/264 (66%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE I
Sbjct: 120 ------QYKLCKVKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PWVSLP+GKGI+L+I EE KR A
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRIA 257
>gi|45187482|ref|NP_983705.1| 40S ribosomal protein S4 [Ashbya gossypii ATCC 10895]
gi|44982220|gb|AAS51529.1| ADL391Cp [Ashbya gossypii ATCC 10895]
gi|374106917|gb|AEY95825.1| FADL391Cp [Ashbya gossypii FDAG1]
Length = 261
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/264 (66%), Positives = 211/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------TYKLGKVKRVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +
Sbjct: 174 KFDTGKLVYVTGGRNLGRIGVITHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEQGR 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKGIKLSI EE +R+A
Sbjct: 234 PWISLPRGKGIKLSIAEERDRRRA 257
>gi|74844658|sp|Q95V34.1|RS4_SPOFR RecName: Full=40S ribosomal protein S4
gi|16566725|gb|AAL26580.1|AF429978_1 ribosomal protein S4 [Spodoptera frugiperda]
Length = 263
Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 177/272 (65%), Positives = 215/272 (79%), Gaps = 9/272 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+ QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G K +P++ T+DGRTIRYPDPLIK ND+++LD+ T+KI +FI
Sbjct: 121 -------YKLCKVKRVSTGPKNVPFLVTHDGRTIRYPDPLIKVNDSVQLDIATSKIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKGTK
Sbjct: 174 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
++SLP+GKG++L+I EE KR +A A Q
Sbjct: 234 AYISLPRGKGVRLTIAEERDKR--IAAKVAGQ 263
>gi|209736960|gb|ACI69349.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 209/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV+ G KG+P + T+D RTIRYPDPLIK NDT+++DL T KITE
Sbjct: 120 ------QYKLCKVKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHT 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLP+GKGI+L+I EE KR A ++
Sbjct: 234 PWVSLPRGKGIRLTIAEERDKRIAAKAGSS 263
>gi|448120177|ref|XP_004203912.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
gi|359384780|emb|CCE78315.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 178/265 (67%), Positives = 209/265 (78%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ HV VD KVRTD TYPAGFMDV++I TNENFRL+YD KGRF +H I EE
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTYPAGFMDVITIDATNENFRLIYDVKGRFAVHRITAEEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ V G++G+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +F+
Sbjct: 120 ------AYKLGKVKKVVLGKRGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGKLVMVTGGRNMGRVGVITHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRA 258
>gi|345566169|gb|EGX49115.1| hypothetical protein AOL_s00079g69 [Arthrobotrys oligospora ATCC
24927]
Length = 258
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 211/266 (79%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KRL+AP HW+LDKL G +AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHMKRLSAPSHWLLDKLSGTYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD T+PAGFMDV++I KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 TNAIVMQRLIQVDGKVRTDATFPAGFMDVITIEKTGEHFRLIYDTKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ GQKGIPY+ T+D RTIRYPDP IK NDT+++DLET KI +F+
Sbjct: 121 -------YKLCKVRRVQLGQKGIPYLVTHDARTIRYPDPSIKVNDTVQVDLETGKINDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
FD G +VMVTGGRN GRVG+I +RE+H G F+ +HI+DA+ + FATRL NVF IG K
Sbjct: 174 PFDTGAIVMVTGGRNMGRVGVITHRERHDGGFDIVHIKDAIDNSFATRLSNVFIIGT-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KL+I EE +R+A A
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAAA 258
>gi|156362157|ref|XP_001625647.1| predicted protein [Nematostella vectensis]
gi|156212490|gb|EDO33547.1| predicted protein [Nematostella vectensis]
Length = 263
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KRLNAPKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYAL E
Sbjct: 1 MARGPKKHMKRLNAPKHWMLDKLSGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALNGEE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + +D KVRTD TYPAGFMDVV+I KT ENFRLLYD KGRF +H I EEAK
Sbjct: 61 VKKIVKQRLIKIDGKVRTDTTYPAGFMDVVTIDKTGENFRLLYDVKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL +VR V G KG+PYI T+D RTIRYPDP IK NDT+ +D++T K+ ++I
Sbjct: 121 -------YKLGRVRRVDVGAKGVPYIVTHDARTIRYPDPNIKVNDTVVIDIKTGKVIDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MV GGRN GRVG++ +REKH GSF+ +H++DA GH+FATRL N+F IGKG K
Sbjct: 174 KFDTGNMAMVVGGRNMGRVGMVTHREKHAGSFDIVHVKDATGHQFATRLTNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P+VSLPKGKG++LSI EE +R A
Sbjct: 234 PYVSLPKGKGVRLSIAEERDRRIA 257
>gi|302918408|ref|XP_003052651.1| 40S ribosomal protein S4 [Nectria haematococca mpVI 77-13-4]
gi|256733591|gb|EEU46938.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 261
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 173/268 (64%), Positives = 214/268 (79%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ILMQR V VD KVRTD TYP+GFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKSILMQRLVKVDGKVRTDSTYPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G VVMVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAVVMVTGGRNMGRVGVITHRERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAYAIA 260
>gi|363755780|ref|XP_003648106.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892142|gb|AET41289.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
DBVPG#7215]
Length = 261
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/264 (66%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSQGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD TYP GFMDV+S+ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVISLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G KG+PY+ T+DGRTIRYPDP +K NDT+K+DL T KIT+FI
Sbjct: 120 ------AYKLGKVKKVQLGNKGVPYVVTHDGRTIRYPDPNVKVNDTVKVDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +
Sbjct: 174 KFDTGKLVYVTGGRNLGRIGVITHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEQGR 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKGKGIKLSI EE +R+A
Sbjct: 234 PWISLPKGKGIKLSIAEERDRRRA 257
>gi|295792254|gb|ADG29131.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 262
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 174/261 (66%), Positives = 207/261 (79%), Gaps = 7/261 (2%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIA 63
G KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 3 GPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKK 62
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK
Sbjct: 63 ICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAK--- 119
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 183
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKFD
Sbjct: 120 ----YKLCKVKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFD 175
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWV 243
GN+ MVTGG N GR+G+I NRE H GSF+ +H++D+ G+ FATRL N+F IGKG KPWV
Sbjct: 176 TGNLCMVTGGANLGRIGVITNREXHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWV 235
Query: 244 SLPKGKGIKLSIIEEARKRQA 264
SLP+GKGI+L+I EE KR A
Sbjct: 236 SLPRGKGIRLTIAEERDKRLA 256
>gi|57113929|ref|NP_001009024.1| 40S ribosomal protein S4, Y isoform 2 [Pan troglodytes]
gi|51316604|sp|Q6GVM7.3|RS4Y2_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 2
gi|48728364|gb|AAT46348.1| RPS4Y2 [Pan troglodytes]
gi|410308434|gb|JAA32817.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
gi|410353921|gb|JAA43564.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 208/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|146413813|ref|XP_001482877.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
gi|146392576|gb|EDK40734.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
Length = 262
Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTFPAGFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++GIPY+ T+DGRT+RYPDPLI+ANDT+K+DLE+ KI++FI
Sbjct: 120 ------SYKLGKVKKVQLGKRGIPYVVTHDGRTLRYPDPLIRANDTVKIDLESGKISDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG +
Sbjct: 174 KFDTGALVMVTGGRNLGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRA 258
>gi|444705790|gb|ELW47180.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 263
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 177/270 (65%), Positives = 210/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGLFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EE K
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEVK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGI ++ T+D RTIRY DPLIK NDTI+++L+T KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGISHLVTHDARTIRYSDPLIKVNDTIQINLKTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPWGKGIRLTIAEERDKRLAAKQSSG 263
>gi|354486732|ref|XP_003505532.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cricetulus
griseus]
gi|344254738|gb|EGW10842.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 262
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 209/269 (77%), Gaps = 7/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ AP+HWMLDKL G FAP+PSSGPH+ RECLPL + LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPRHWMLDKLTGVFAPRPSSGPHRLRECLPLAIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + VD KVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L+T KIT+ I
Sbjct: 121 -------YKLCKVRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDTGKITDAI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLP+GKGI+L+I EE KR A S
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSG 262
>gi|400596580|gb|EJP64351.1| ribosomal family S4e [Beauveria bassiana ARSEF 2860]
Length = 259
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 172/266 (64%), Positives = 213/266 (80%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGVYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ILMQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TRSILMQRLVKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+F+
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GR+G+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAIAMVTGGRNMGRIGVITHRERHDGGFAIVHIKDAIDNTFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+S+PKGKG+KL+I EE +R+ALA
Sbjct: 233 PWISIPKGKGVKLTIAEERDRRRALA 258
>gi|126139561|ref|XP_001386303.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
gi|126093585|gb|ABN68274.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 212/265 (80%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ+HV VD KVRTD T+PAGFMDV+S+ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQQHVKVDGKVRTDSTFPAGFMDVISLEATNEHFRLIYDVKGRFAVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++G+PY+ T+DGRT+RYPDPLI+ANDT+K+DL T KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKRGVPYVVTHDGRTLRYPDPLIRANDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLANVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRA 258
>gi|126273970|ref|XP_001387773.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
gi|126213643|gb|EAZ63750.1| ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 212/265 (80%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ+HV VD KVRTD T+PAGFMDV+S+ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQQHVKVDGKVRTDSTFPAGFMDVISLEATNEHFRLVYDVKGRFAVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++G+PY+ T+DGRT+RYPDPLI+ANDT+K+DL T KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKRGVPYVVTHDGRTLRYPDPLIRANDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLANVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRT 258
>gi|70909487|emb|CAJ17168.1| ribosomal protein S4e [Mycetophagus quadripustulatus]
Length = 261
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 179/268 (66%), Positives = 210/268 (78%), Gaps = 7/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KGIP++ T DGRTIRYPDP IK NDTI+L++ T+KI +FI
Sbjct: 121 -------YKLCKVKKVQTGPKGIPFLVTRDGRTIRYPDPNIKVNDTIQLEIATSKILDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + +RE+H GS + +H++DA GH FATRL NVF IGKG+K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVSRERHPGSVDIVHVKDANGHTFATRLNNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
P+VSLP+GKG+KLSI EE KR A T
Sbjct: 234 PYVSLPRGKGVKLSIAEERDKRLAAKTQ 261
>gi|222831651|ref|NP_001138538.1| 40S ribosomal protein S4, Y isoform 2 [Macaca mulatta]
gi|219880801|gb|ACL51674.1| ribosomal protein S4 Y-linked 2 [Macaca mulatta]
Length = 263
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 208/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTXVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|410268286|gb|JAA22109.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
Length = 263
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 208/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ E KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAAERDKRLATKQSSG 263
>gi|388452714|ref|NP_001252674.1| ribosomal protein S4, Y-linked 1 [Macaca mulatta]
gi|387539378|gb|AFJ70316.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 208/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVYAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKG++L+I EE KR A S+
Sbjct: 234 PWISLPRGKGVRLTIAEERDKRLATKQSSG 263
>gi|170285559|emb|CAM34499.1| putative ribosomal protein S4 [Cotesia congregata]
Length = 262
Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 177/264 (67%), Positives = 211/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG +KHLKRL+APK WMLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPRKHLKRLHAPKAWMLDKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + +D+KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKIDSKVRTDINYPAGFMDVITIEKTGEYFRLIYDVKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G KGIP+I T+DGRTIRYPDP+IK NDTI+L++ T+KI + I
Sbjct: 121 -------YKLCKVRKVQTGPKGIPFIVTHDGRTIRYPDPVIKVNDTIQLEIATSKILDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+F+ GN+ M+TGGRN GRVG + NRE+H GSF+ HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 RFEPGNLCMITGGRNLGRVGTVVNRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGAK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P+VSLP+GKGIKLSI EE KR A
Sbjct: 234 PYVSLPRGKGIKLSIAEERDKRLA 257
>gi|358393591|gb|EHK42992.1| hypothetical protein TRIATDRAFT_300975 [Trichoderma atroviride IMI
206040]
Length = 259
Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 213/266 (80%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGLYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR V VD KVRTD TYPAG+MDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIMMQRLVKVDGKVRTDITYPAGYMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G V MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAVAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KL+I EE +R+ALA
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRALA 258
>gi|354544187|emb|CCE40910.1| hypothetical protein CPAR2_109480 [Candida parapsilosis]
Length = 264
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/265 (67%), Positives = 210/265 (79%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +APK S GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPKSSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ+HV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQQHVQVDGKVRTDATFPAGFMDVITLEATNENFRLIYDVKGRFAVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+
Sbjct: 120 ------TYKLGKVKRVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGKLVMVTGGRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSITEERDRRRA 258
>gi|72533642|gb|AAI00906.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
Length = 263
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 208/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAEERDKRLAAKQSSG 263
>gi|391331686|ref|XP_003740274.1| PREDICTED: 40S ribosomal protein S4-like [Metaseiulus occidentalis]
Length = 262
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/265 (67%), Positives = 209/265 (78%), Gaps = 7/265 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPK W+LDKLGG FAP+PS+GPHK RE LP+ILILRN+LKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKSWLLDKLGGVFAPRPSAGPHKLRESLPIILILRNKLKYALTGSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VD KVRTD T+P GFMDVVSI KT E FR+ YD KGRF LH I EEA
Sbjct: 61 VTKIVNQRLIKVDGKVRTDATFPTGFMDVVSIEKTGEFFRIHYDVKGRFILHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLC+V+ + G K IP++ +DGRTIRYPDPLIKANDT+K+D+ T KI +FI
Sbjct: 120 ------EYKLCRVKKMSVGPKKIPFLVLHDGRTIRYPDPLIKANDTVKVDIATGKIDDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGGRN GRVGII +RE+H GSF+ +HI+D+ GH FATR +F IGKG+K
Sbjct: 174 KFDTGNVCMVTGGRNLGRVGIITSRERHPGSFDIVHIKDSSGHTFATRQSYIFVIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
PWVSLPKGKG+KLSI EE KR A+
Sbjct: 234 PWVSLPKGKGVKLSIAEERDKRLAV 258
>gi|4506727|ref|NP_000999.1| 40S ribosomal protein S4, Y isoform 1 [Homo sapiens]
gi|133948|sp|P22090.2|RS4Y1_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|7959921|gb|AAF71131.1|AF116721_111 PRO2646 [Homo sapiens]
gi|337512|gb|AAA63256.1| ribosomal protein S4Y isoform [Homo sapiens]
gi|2791859|gb|AAB96967.1| ribosomal protein s4 Y isoform [Homo sapiens]
gi|16307477|gb|AAH10286.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
gi|119623176|gb|EAX02771.1| ribosomal protein S4, Y-linked 1, isoform CRA_b [Homo sapiens]
gi|123981388|gb|ABM82523.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
gi|123996231|gb|ABM85717.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
gi|158259099|dbj|BAF85508.1| unnamed protein product [Homo sapiens]
gi|227937265|gb|ACP43278.1| ribosomal protein S4 Y-linked 1 [Gorilla gorilla]
Length = 263
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 208/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAEERDKRLATKQSSG 263
>gi|38503307|sp|Q861U7.2|RS4Y1_PONPY RecName: Full=40S ribosomal protein S4, Y isoform 1
Length = 263
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF + I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLATKQSSG 263
>gi|68477663|ref|XP_717144.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|68477826|ref|XP_717065.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|241952448|ref|XP_002418946.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
gi|46438762|gb|EAK98088.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46438844|gb|EAK98169.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|223642285|emb|CAX44254.1| 40s ribosomal protein s4 (s7) [Candida dubliniensis CD36]
gi|238883906|gb|EEQ47544.1| 40S ribosomal protein S4 [Candida albicans WO-1]
Length = 262
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 211/265 (79%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQ+HV VD KVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA
Sbjct: 61 VKAIMMQQHVQVDGKVRTDTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +FI
Sbjct: 120 ------AYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRA 258
>gi|195428307|ref|XP_002062215.1| GK17425 [Drosophila willistoni]
gi|194158300|gb|EDW73201.1| GK17425 [Drosophila willistoni]
Length = 261
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 210/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ T KIT++I
Sbjct: 121 -------YKLCKVKKNQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSISEERDKRLAAKT 260
>gi|354548249|emb|CCE44986.1| hypothetical protein CPAR2_407890 [Candida parapsilosis]
Length = 264
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/265 (67%), Positives = 210/265 (79%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +APK S+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPKSSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ+HV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQQHVQVDGKVRTDTTFPAGFMDVITLEATNENFRLIYDVKGRFAVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+
Sbjct: 120 ------TYKLGKVKRVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGKLVMVTGGRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSITEERDRRRA 258
>gi|194870273|ref|XP_001972620.1| GG15623 [Drosophila erecta]
gi|190654403|gb|EDV51646.1| GG15623 [Drosophila erecta]
Length = 261
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/267 (65%), Positives = 210/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ + KIT++I
Sbjct: 121 -------YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSIAEERDKRLAAKT 260
>gi|410077092|ref|XP_003956128.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
gi|372462711|emb|CCF56993.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
Length = 261
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL T KI+E+I
Sbjct: 120 ------SYKLGKVRKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLATGKISEYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLSNVFVIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKGKGIKL+I EE +R+A
Sbjct: 234 PWISLPKGKGIKLTIAEERDRRRA 257
>gi|406606082|emb|CCH42555.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 261
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 211/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDATFPAGFMDVITLEATNENFRLVYDVKGRFAVHRISDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ V G++G+PY+ T+DGRTIRYPDP IK NDT+K+DLE+ KI++FI
Sbjct: 120 ------SYKLGKVKQVALGKRGVPYVVTHDGRTIRYPDPAIKINDTVKIDLESGKISDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDTGKLVYVTGGRNLGRVGVITHRERHEGGFDLVHIKDSLENTFVTRLQNVFVIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKLSI EE +R+A
Sbjct: 234 PYISLPKGKGIKLSISEERDRRRA 257
>gi|50303511|ref|XP_451697.1| 40S ribosomal protein S4 [Kluyveromyces lactis NRRL Y-1140]
gi|49640829|emb|CAH02090.1| KLLA0B03652p [Kluyveromyces lactis]
Length = 261
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/264 (66%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWMLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDP IK NDT+K+DL T IT+FI
Sbjct: 120 ------SYKLAKVKKVQLGKKGIPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GRVG I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +
Sbjct: 174 KFDTGKLVYVTGGRNLGRVGTIVHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGR 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKGKGIKL+I EE +R+A
Sbjct: 234 PWISLPKGKGIKLTISEERDRRRA 257
>gi|448111276|ref|XP_004201802.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
gi|359464791|emb|CCE88496.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/265 (67%), Positives = 208/265 (78%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ HV VD KVRTD TYPAGFMDV+SI TNE FRL+YD KGRF +H I EE
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTYPAGFMDVISIDATNEYFRLIYDVKGRFAVHRITAEEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ V G++G+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +F+
Sbjct: 120 ------AYKLGKVKKVVLGKRGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGKLVMVTGGRNMGRVGVITHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRA 258
>gi|291407687|ref|XP_002720152.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 1
[Oryctolagus cuniculus]
Length = 255
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 207/270 (76%), Gaps = 15/270 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+ G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 IFV---------------GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 165
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 166 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 225
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 226 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 255
>gi|149712494|ref|XP_001498885.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Equus
caballus]
Length = 263
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/270 (65%), Positives = 208/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKL G FAP+ S+ PHK RECLP+++ LRNRLKY LT E
Sbjct: 1 MARGPKKHLKRLRAPKQWMLDKLTGVFAPRSSTRPHKLRECLPVVIFLRNRLKYGLTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I M+R V +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMRRFVKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKTFVGPKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGG N GR+G+I NRE++ GSFE +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDAGNVCMVTGGANLGRIGVITNRERYPGSFEVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE R A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDVRLATKQSSG 263
>gi|302687328|ref|XP_003033344.1| 40S ribosomal protein S4 [Schizophyllum commune H4-8]
gi|300107038|gb|EFI98441.1| hypothetical protein SCHCODRAFT_76052 [Schizophyllum commune H4-8]
Length = 263
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/268 (65%), Positives = 207/268 (77%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKLGG +AP+PS GPHK RE PL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRESFPLSVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQR + +D KVRTD YP GFMDVVSI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTAIVMQRLIKIDGKVRTDTNYPTGFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+VR V G +G+P+I T+DGRTIRYPDP IK NDT+KLDLET KIT+F+
Sbjct: 120 ------SYKLCRVRKVAIGARGVPHIVTHDGRTIRYPDPAIKVNDTVKLDLETGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VM+TGGRN GR G+I +REKH G F+ +H++DAL FATRL N+F IG+GTK
Sbjct: 174 KFDTGNIVMITGGRNMGRSGVIVHREKHIGDFDIVHVRDALDRTFATRLSNIFVIGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
PW+SLPKGKG KL+I EE R++Q A
Sbjct: 234 PWISLPKGKGTKLTIAEERDVRRKQRAA 261
>gi|157819705|ref|NP_001103082.1| ribosomal protein S4, Y-linked 2 [Rattus norvegicus]
gi|149048928|gb|EDM01382.1| rCG29848 [Rattus norvegicus]
Length = 262
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/269 (65%), Positives = 209/269 (77%), Gaps = 7/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ AP+HWMLDKL G FAP+PS+GPH+ RECLPL + LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPRHWMLDKLTGVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + VD KVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L++ KIT+ I
Sbjct: 121 -------YKLCKVRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+GII NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLP+GKGI+L+I EE KR A S
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSG 262
>gi|410308430|gb|JAA32815.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
gi|410353917|gb|JAA43562.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
Length = 263
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ E KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAAERDKRLATKQSSG 263
>gi|195494033|ref|XP_002094667.1| RpS4 [Drosophila yakuba]
gi|194180768|gb|EDW94379.1| RpS4 [Drosophila yakuba]
Length = 261
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/267 (65%), Positives = 210/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYPAG+MD++++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ + KIT++I
Sbjct: 121 -------YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSIAEERDKRLAAKT 260
>gi|241948211|ref|XP_002416828.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
gi|223640166|emb|CAX44413.1| 40s ribosomal protein S4 (S7), putative [Candida dubliniensis CD36]
Length = 262
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 211/265 (79%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+ S+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRQSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQ+HV VD KVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA
Sbjct: 61 VKAIMMQQHVQVDGKVRTDTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +FI
Sbjct: 120 ------SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRA 258
>gi|448117738|ref|XP_004203329.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
gi|359384197|emb|CCE78901.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/265 (66%), Positives = 208/265 (78%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ HV VD KVRTD TYP GFMDV++I TNENFRL+YD KGRF +H I EE
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTYPTGFMDVITIDATNENFRLIYDVKGRFAVHRITAEEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ V G++GIPY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +++
Sbjct: 120 ------AYKLGKVKKVVLGKRGIPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGKLVMVTGGRNMGRVGVIAHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGNEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRA 258
>gi|410308428|gb|JAA32814.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
gi|410353915|gb|JAA43561.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ E KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAAERDKRLATKQSSG 263
>gi|194750067|ref|XP_001957453.1| GF24027 [Drosophila ananassae]
gi|190624735|gb|EDV40259.1| GF24027 [Drosophila ananassae]
Length = 261
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/267 (65%), Positives = 210/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ + KIT++I
Sbjct: 121 -------YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KL+I EE KR A T
Sbjct: 234 PYISLPKGKGVKLTISEERDKRLAAKT 260
>gi|219880799|gb|ACL51673.1| ribosomal protein S4 Y-linked 1, partial [Macaca mulatta]
Length = 259
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 206/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVYAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKG++L+I EE KR A
Sbjct: 234 PWISLPRGKGVRLTIAEERDKRLA 257
>gi|156542863|ref|XP_001599933.1| PREDICTED: 40S ribosomal protein S4-like [Nasonia vitripennis]
Length = 262
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/264 (67%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KTNE FRL+YD KGRF +H I EAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G KGIP++ T+DGRTIRYPDPLIK NDTI+L++ T KI + I
Sbjct: 121 -------YKLCKVRRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIQLEIATGKILDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ M+TGGRN GRVG + NRE+H+GSF+ HI+D+ GH FATRL NVF IGKGTK
Sbjct: 174 RFDTGNLCMITGGRNLGRVGTVVNRERHQGSFDICHIKDSQGHTFATRLHNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P+VSLP+G G+KL+I EE KR A
Sbjct: 234 PYVSLPRGNGVKLTIAEERDKRLA 257
>gi|74205095|dbj|BAE21004.1| unnamed protein product [Mus musculus]
gi|148678798|gb|EDL10745.1| RIKEN cDNA 1110033J19 [Mus musculus]
Length = 262
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 209/269 (77%), Gaps = 7/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ AP+HWMLDKL G FAP+PS+GPH+ RECLPL + LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPRHWMLDKLTGVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + VD KVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L++ KIT+ I
Sbjct: 121 -------YKLCKVRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLP+GKGI+L+I EE KR A S
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSG 262
>gi|38503308|sp|Q861U8.2|RS4Y1_GORGO RecName: Full=40S ribosomal protein S4, Y isoform 1
Length = 263
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 208/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAEERDKRLATKQSSG 263
>gi|24663668|ref|NP_729871.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
gi|24663672|ref|NP_524053.2| ribosomal protein S4, isoform B [Drosophila melanogaster]
gi|195327307|ref|XP_002030362.1| GM25394 [Drosophila sechellia]
gi|195589999|ref|XP_002084736.1| GD14426 [Drosophila simulans]
gi|76803819|sp|P41042.2|RS4_DROME RecName: Full=40S ribosomal protein S4
gi|7294504|gb|AAF49846.1| ribosomal protein S4, isoform B [Drosophila melanogaster]
gi|7294505|gb|AAF49847.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
gi|40882499|gb|AAR96161.1| RE57333p [Drosophila melanogaster]
gi|194119305|gb|EDW41348.1| GM25394 [Drosophila sechellia]
gi|194196745|gb|EDX10321.1| GD14426 [Drosophila simulans]
gi|220959550|gb|ACL92318.1| RpS4-PA [synthetic construct]
Length = 261
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/267 (65%), Positives = 210/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI AND++++D+ + KIT++I
Sbjct: 121 -------YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSIAEERDKRLAAKT 260
>gi|75029893|sp|Q4PMB3.1|RS4_IXOSC RecName: Full=40S ribosomal protein S4
gi|67083833|gb|AAY66851.1| ribosomal protein S4 [Ixodes scapularis]
Length = 262
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 207/262 (79%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VD KVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH I EEAK
Sbjct: 61 VKKIVKQRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL T KI ++I
Sbjct: 121 -------YKLCRVKRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK TK
Sbjct: 174 KFDSGNVCMVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P++SLP+GKGIKLS+ EE +R
Sbjct: 234 PYISLPRGKGIKLSVAEERDRR 255
>gi|62896747|dbj|BAD96314.1| ribosomal protein S4, Y-linked 1 Y isoform variant [Homo sapiens]
Length = 263
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MV GG N GRVG+I NRE+H GSF +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFDTGNLCMVIGGANLGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAEERDKRLATKQSSG 263
>gi|448097249|ref|XP_004198623.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
gi|359380045|emb|CCE82286.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/265 (66%), Positives = 208/265 (78%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ H+ VD KVRTD TYPAGFMDV+SI TNE FRL+YD KGRF +H I EE
Sbjct: 61 VKAILMQEHIKVDGKVRTDSTYPAGFMDVISIDSTNEYFRLIYDVKGRFAVHRITAEEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ V G++GIPY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +++
Sbjct: 120 ------AYKLGKVKKVVLGKRGIPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGKLVMVTGGRNMGRVGVIAHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGNEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRRA 258
>gi|410080303|ref|XP_003957732.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
gi|372464318|emb|CCF58597.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
Length = 261
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL T KI+++I
Sbjct: 120 ------SYKLGKVRKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLATGKISDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLSNVFVIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKGKGIKL+I EE +R+A
Sbjct: 234 PWISLPKGKGIKLTIAEERDRRRA 257
>gi|346469671|gb|AEO34680.1| hypothetical protein [Amblyomma maculatum]
Length = 262
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 208/265 (78%), Gaps = 7/265 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VD KVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH I EEAK
Sbjct: 61 VKKIVKQRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL T KI ++I
Sbjct: 121 -------YKLCRVKRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GRVGII +RE+H GSF+ +H++DA GH FATRL +F IGK TK
Sbjct: 174 KFDSGNMCMVTGGHNLGRVGIITSRERHPGSFDIVHVKDAQGHSFATRLNYIFVIGKSTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
P++SLP+GKGIKL++ EE +R L
Sbjct: 234 PYISLPRGKGIKLTVAEERDRRLQL 258
>gi|227937267|gb|ACP43279.1| ribosomal protein S4 Y-linked 2 [Gorilla gorilla]
Length = 263
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKHVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAARQSSG 263
>gi|346325391|gb|EGX94988.1| ribosomal protein S4 [Cordyceps militaris CM01]
Length = 258
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 170/266 (63%), Positives = 212/266 (79%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG+KKH KRL+AP HW+LDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGIKKHQKRLSAPSHWLLDKLSGVYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ILMQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TRSILMQRLIKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+F+
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPSIKVNDTVKIDLATGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GR+G+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAIAMVTGGRNMGRIGVITHRERHDGGFAIVHIKDAIDNTFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+S+PKGKG+KL+I EE +R+ALA
Sbjct: 233 PWISVPKGKGVKLTIAEERDRRRALA 258
>gi|342356395|gb|AEL28856.1| ribosomal protein S4 [Heliconius melpomene cythera]
Length = 263
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 213/269 (79%), Gaps = 7/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+ QR + VD KVRTD TYPAGFMDV+SI KTNE FRL+YD KGRF +H I EEAK
Sbjct: 61 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVISIEKTNELFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G K +PY+ T+DGRT+RYPDPLIK ND+++LD+ + +I +FI
Sbjct: 121 -------YKLCKVRHVGTGPKNVPYLVTHDGRTLRYPDPLIKVNDSVQLDIASARIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKGTK
Sbjct: 174 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHVRDSSGHTFATRLHNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
++SLP+GKGI+L+I EE KR A +A
Sbjct: 234 AYISLPRGKGIRLTIAEERDKRIAAKQAA 262
>gi|116871421|gb|ABK30794.1| ribosomal protein S4 [Branchiostoma belcheri]
Length = 264
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 175/271 (64%), Positives = 205/271 (75%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLAAPNHWMLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR + VD KVRTD+ YPAGFMDV++I KT ENFRL+YD KGRF +H I EEAK
Sbjct: 61 VKRILMQRLIKVDGKVRTDRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G KGIP + T+D RTIRYPDP I+ ND++++D+ T KIT+ I
Sbjct: 121 -------YKLCKVRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGGRN GRVG++ NRE+H GSF+ +H++D GH FATRL ++F IG+G K
Sbjct: 174 KFDTGNVCMVTGGRNLGRVGLVTNRERHPGSFDIVHVKDTAGHTFATRLADIFIIGRGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
PWVSLPKGKGI +E +R AL + A
Sbjct: 234 PWVSLPKGKGIPSVHRKERDRRLALKAATAV 264
>gi|57113861|ref|NP_001008987.1| 40S ribosomal protein S4, Y isoform 1 [Pan troglodytes]
gi|38503309|sp|Q861U9.2|RS4Y1_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|38503310|sp|Q861V0.2|RS4Y1_PANPA RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|48728362|gb|AAT46347.1| RPS4Y [Pan troglodytes]
Length = 263
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G K
Sbjct: 174 KFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ E KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAAERDKRLATKQSSG 263
>gi|70909489|emb|CAJ17169.1| ribosomal protein S4e [Sphaerius sp. APV-2005]
Length = 262
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 214/270 (79%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDVV+I KT+E FRL+YD KGRF +H I EEAK
Sbjct: 61 VKKIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTSEFFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G +GIP++ T+DGRTIRYPDP+IK NDTI+L++ T+KI + I
Sbjct: 121 -------YKLCKVRKVQTGPRGIPFLVTHDGRTIRYPDPVIKVNDTIQLEIATSKIMDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+K
Sbjct: 174 KFESGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHIFATRLNNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
+VSLP+GKG+KLSI EE KR LA AA
Sbjct: 234 AYVSLPRGKGVKLSIAEERDKR--LAAKAA 261
>gi|448524476|ref|XP_003871516.1| Rps4a predicted ribosomal protein [Candida orthopsilosis Co 90-125]
gi|380353338|emb|CCG26094.1| Rps4a predicted ribosomal protein [Candida orthopsilosis]
Length = 264
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 177/265 (66%), Positives = 210/265 (79%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +APK S+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPKSSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ+HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQQHVQVDGKVRTDTTFPAGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+
Sbjct: 120 ------TYKLGKVKKVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGKLVMVTGGRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSITEERDRRRA 258
>gi|164429760|ref|XP_964251.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
gi|157073608|gb|EAA35015.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
gi|336463316|gb|EGO51556.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2508]
gi|350297476|gb|EGZ78453.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2509]
Length = 261
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 173/268 (64%), Positives = 211/268 (78%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +AP+PS+GPHK REC+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPRPSAGPHKLRECMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+DEEAK
Sbjct: 61 TKAIMMQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++LET KI +F+
Sbjct: 121 -------YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H G F IH++DAL + FATR NVF IG K
Sbjct: 174 KFDTGAIAMVTGGRNMGRVGVITHRERHDGGFNIIHVKDALDNTFATRESNVFVIG-SEK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRANALA 260
>gi|50550587|ref|XP_502766.1| 40S ribosomal protein S4 [Yarrowia lipolytica]
gi|6094184|sp|O59950.1|RS4_YARLI RecName: Full=40S ribosomal protein S4; AltName: Full=S7
gi|2997729|gb|AAC08586.1| ribosomal protein S7 [Yarrowia lipolytica]
gi|49648634|emb|CAG80954.1| YALI0D12903p [Yarrowia lipolytica CLIB122]
Length = 260
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 176/264 (66%), Positives = 207/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+ S+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR V VD KVRTD T+PAGFMDV+ + KT ENFRL+YD KGRF +H I DEEA
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPAGFMDVIQLEKTGENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK NDT+K+DL T KIT F+
Sbjct: 120 ------AYKLGKVKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+VM TGGRN GRVG I +RE+H+G F+ +HI+DAL ++F TRL NVF IG+G K
Sbjct: 174 KFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
+SLPKGKGIKLSI EE R+A
Sbjct: 234 SLISLPKGKGIKLSIAEERDARRA 257
>gi|320163608|gb|EFW40507.1| 40S ribosomal protein S4 [Capsaspora owczarzaki ATCC 30864]
Length = 263
Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 172/270 (63%), Positives = 213/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G KKHLKRL APKHWMLDKL G +AP+PS+GPHK RECLPLI+ LRNRLKYALT++E
Sbjct: 1 MVVGSKKHLKRLAAPKHWMLDKLTGTWAPRPSTGPHKLRECLPLIVFLRNRLKYALTHQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL QR V VD +VRTD TYPAGFMDV+SI K+NE FRLLYD KGRF +H I EEAK
Sbjct: 61 VKFILAQRLVKVDGRVRTDITYPAGFMDVISIEKSNEVFRLLYDVKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G KG+P + T+D RTIRYPDPLI AND+++++LET +I +F+
Sbjct: 121 -------YKLCKVRQVSTGAKGVPLLVTHDARTIRYPDPLIGANDSVQVELETGRIIDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+VM+T GRN GRVG+I +RE+H+G F+ +H++D+LGH FATR+GNVF IGKG K
Sbjct: 174 KFETGNLVMITAGRNIGRVGVIVSRERHEGGFDIVHVKDSLGHSFATRIGNVFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
+VSLP+GKG++LSI EE +R A +A
Sbjct: 234 SYVSLPRGKGVRLSIAEERDRRIAEKAKSA 263
>gi|442755327|gb|JAA69823.1| Putative ribosomal protein s4 [Ixodes ricinus]
Length = 262
Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 175/262 (66%), Positives = 206/262 (78%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS GPHK RE LPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKSWMLDKLGGVFAPRPSPGPHKLRESLPLIIMLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VD KVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH I EEAK
Sbjct: 61 VKKIVKQRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL T KI ++I
Sbjct: 121 -------YKLCRVKRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK TK
Sbjct: 174 KFDSGNVCMVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P++SLP+GKGIKLS+ EE +R
Sbjct: 234 PYISLPRGKGIKLSVAEERDRR 255
>gi|198285663|gb|ACH85370.1| 40S ribosomal protein S4 [Salmo salar]
Length = 259
Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 173/265 (65%), Positives = 207/265 (78%), Gaps = 7/265 (2%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I
Sbjct: 2 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 61
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 62 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA------ 115
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
Q+KLCKV+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE IKFD G
Sbjct: 116 -QYKLCKVKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTG 174
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
N+ MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSL
Sbjct: 175 NLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSL 234
Query: 246 PKGKGIKLSIIEEARKRQALATSAA 270
P+GKGI+L+I EE KR A ++
Sbjct: 235 PRGKGIRLTIAEERDKRIAAKAGSS 259
>gi|133777261|gb|AAI00907.1| RPS4Y1 protein [Homo sapiens]
Length = 262
Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 207/269 (76%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIK
Sbjct: 120 ------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KP
Sbjct: 174 FDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKP 233
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L++ EE KR A S+
Sbjct: 234 WISLPRGKGIRLTVAEERDKRLAAKQSSG 262
>gi|70909479|emb|CAJ17164.1| ribosomal protein S4e [Biphyllus lunatus]
Length = 261
Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 209/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP++K NDTI++++ T+KI +FI
Sbjct: 121 -------YKLCKVKKVQTGPKGIPFLVTHDGRTIRYPDPMVKVNDTIQVEIATSKILDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GS + +HI+DA GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSSDIVHIKDANGHTFATRLNNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
VSLP+GKG+KLSI EE KR A T
Sbjct: 234 ALVSLPRGKGVKLSIAEERDKRLAAKT 260
>gi|449548320|gb|EMD39287.1| hypothetical protein CERSUDRAFT_112935 [Ceriporiopsis subvermispora
B]
Length = 263
Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 172/268 (64%), Positives = 208/268 (77%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V++I+MQR + VD KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VLSIVMQRLIKVDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G KG+PYI T+DGRTIRYPDPLIK NDTIK D+E KI +++
Sbjct: 120 ------TYKLCKVKKVAIGTKGVPYIVTHDGRTIRYPDPLIKVNDTIKFDIEQGKIADYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G K
Sbjct: 174 KFDTGNIVMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRITNIFVIGEGIK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
PW+SLPKGKG+KL+I EE R+RQ A
Sbjct: 234 PWISLPKGKGVKLTIAEERDVRRRQRAA 261
>gi|28204689|gb|AAO37289.1| ribosomal protein S4 [Pongo pygmaeus]
Length = 262
Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 206/269 (76%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF + I EEAK
Sbjct: 61 KKICMQRFIKIDGKVRVDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIK
Sbjct: 120 ------YKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GNV MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KP
Sbjct: 174 FDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKP 233
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 WISLPRGKGIRLTIAEERDKRLATKQSSG 262
>gi|6321997|ref|NP_012073.1| ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae S288c]
gi|398365603|ref|NP_012679.3| Rps4ap [Saccharomyces cerevisiae S288c]
gi|338819353|sp|P0CX35.1|RS4A_YEAST RecName: Full=40S ribosomal protein S4-A; AltName: Full=RP5;
AltName: Full=S7; AltName: Full=YS6
gi|338819354|sp|P0CX36.1|RS4B_YEAST RecName: Full=40S ribosomal protein S4-B; AltName: Full=RP5;
AltName: Full=S7; AltName: Full=YS6
gi|313103666|pdb|3IZB|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|364506100|pdb|3U5C|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506138|pdb|3U5G|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|172502|gb|AAA35011.1| ribosomal protein S7 [Saccharomyces cerevisiae]
gi|172504|gb|AAA35012.1| ribosomal protein S7 [Saccharomyces cerevisiae]
gi|1015892|emb|CAA89678.1| RPS7B [Saccharomyces cerevisiae]
gi|2347176|gb|AAB68372.1| Rps7ap: Ribosomal protein S7 [Saccharomyces cerevisiae]
gi|151944148|gb|EDN62441.1| ribosomal protein S4B [Saccharomyces cerevisiae YJM789]
gi|151945211|gb|EDN63462.1| ribosomal protein S4A [Saccharomyces cerevisiae YJM789]
gi|190405978|gb|EDV09245.1| ribosomal protein S4B [Saccharomyces cerevisiae RM11-1a]
gi|190409613|gb|EDV12878.1| ribosomal protein S4A [Saccharomyces cerevisiae RM11-1a]
gi|259146964|emb|CAY80220.1| Rps4bp [Saccharomyces cerevisiae EC1118]
gi|259147610|emb|CAY80861.1| Rps4ap [Saccharomyces cerevisiae EC1118]
gi|285810109|tpg|DAA06896.1| TPA: ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae
S288c]
gi|285813032|tpg|DAA08930.1| TPA: Rps4ap [Saccharomyces cerevisiae S288c]
gi|349578755|dbj|GAA23920.1| K7_Rps4bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|349579328|dbj|GAA24491.1| K7_Rps4ap [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299017|gb|EIW10112.1| Rps4bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 261
Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKLSI EE +R+A
Sbjct: 234 PYISLPKGKGIKLSIAEERDRRRA 257
>gi|410308432|gb|JAA32816.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
gi|410353919|gb|JAA43563.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 172/270 (63%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KIT FI
Sbjct: 121 -------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L++ E KR A S+
Sbjct: 234 PWISLPRGKGIRLTVAAERDKRLATKQSSG 263
>gi|367042184|ref|XP_003651472.1| 40S ribosomal protein S4 [Thielavia terrestris NRRL 8126]
gi|346998734|gb|AEO65136.1| hypothetical protein THITE_2111827 [Thielavia terrestris NRRL 8126]
Length = 262
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 212/269 (78%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+DEEAK
Sbjct: 61 TKAILMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLET KIT+FI
Sbjct: 121 -------YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG K
Sbjct: 174 KFDTGAIAMVTGGRNMGRVGVITHRERHDGGFGIVHLKDAIDNTFATRESNVFVIGS-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKG+G+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGRGVKLTIAEERDRRRAHALAG 261
>gi|336264577|ref|XP_003347065.1| 40S ribosomal protein S4 [Sordaria macrospora k-hell]
gi|380093082|emb|CCC09319.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 261
Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 172/268 (64%), Positives = 212/268 (79%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +AP+PS+GPHK REC+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPRPSAGPHKLRECMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H I+DEEAK
Sbjct: 61 TKAIMMQRLIKVDGKVRTDITYPAGFMDVITIEKTGEHFRLIYDTKGRFTVHRIQDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++LET KI +F+
Sbjct: 121 -------YKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G++ MVTGGRN GRVG+I +RE+H G F IH++DAL + FATR NVF IG K
Sbjct: 174 KFDTGSIAMVTGGRNMGRVGVITHRERHDGGFNIIHVKDALDNTFATRESNVFVIG-SEK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRANAIA 260
>gi|74829226|sp|Q56FH2.1|RS4_LYSTE RecName: Full=40S ribosomal protein S4
gi|62083411|gb|AAX62430.1| ribosomal protein S4 [Lysiphlebus testaceipes]
Length = 262
Score = 362 bits (929), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WML KLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKSWMLGKLGGVYAPRPSTGPHKLRECLPLLIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + VD KVRTD YP GFMDVV+I KT E FRL+YD KGRF +H I +EEAK
Sbjct: 61 VTKITMQRLIKVDGKVRTDSNYPLGFMDVVTIEKTGEFFRLIYDVKGRFSIHRISNEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G KG+P++ T+DGRT+RYPDP+IK NDTI+L++ TNKI + I
Sbjct: 121 -------YKLCKVRRVQTGPKGVPFLVTHDGRTLRYPDPVIKVNDTIQLEIATNKILDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATR+ NVF IGKG+K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRMNNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
+VSLP+GKG+KLSI EE KR A
Sbjct: 234 AYVSLPRGKGVKLSIAEERDKRLA 257
>gi|295667347|ref|XP_002794223.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286329|gb|EEH41895.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 262
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 209/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPL++ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLVVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT FI
Sbjct: 120 ------EYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDLATGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A+A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAVALAG 261
>gi|225680007|gb|EEH18291.1| 40S ribosomal protein S4-A [Paracoccidioides brasiliensis Pb03]
gi|226291789|gb|EEH47217.1| 40S ribosomal protein S4 [Paracoccidioides brasiliensis Pb18]
Length = 262
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 209/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPL++ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLVVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT FI
Sbjct: 120 ------EYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDLATGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A+A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAVALAG 261
>gi|28204681|gb|AAO37288.1| ribosomal protein S4 [Gorilla gorilla]
Length = 262
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 207/269 (76%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIK
Sbjct: 120 ------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KP
Sbjct: 174 FDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKP 233
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L++ EE KR A S+
Sbjct: 234 WISLPRGKGIRLTVAEERDKRLATKQSSG 262
>gi|198285597|gb|ACH85337.1| 40S ribosomal protein S4 [Salmo salar]
Length = 259
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/265 (65%), Positives = 206/265 (77%), Gaps = 7/265 (2%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I
Sbjct: 2 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 61
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 62 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA------ 115
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
Q+KLCKV+ G KG+P + T+D RTIRYPDPLIK NDT+++DL T KITE IKFD G
Sbjct: 116 -QYKLCKVKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTG 174
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
N+ MVTGG N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSL
Sbjct: 175 NLCMVTGGANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSL 234
Query: 246 PKGKGIKLSIIEEARKRQALATSAA 270
P+GKGI+L+I EE KR A ++
Sbjct: 235 PRGKGIRLTIAEERDKRIAAKAGSS 259
>gi|296470815|tpg|DAA12930.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KK LK + APKHWMLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT E
Sbjct: 1 MARGPKKPLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIXFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + +D KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I +EAK
Sbjct: 61 VKKIGMQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KI +FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVISNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|358422345|ref|XP_003585334.1| PREDICTED: 40S ribosomal protein S4-like [Bos taurus]
Length = 263
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 207/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KK LK + APKHWMLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT E
Sbjct: 1 MARGPKKPLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLITFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + +D KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I +EAK
Sbjct: 61 VKKIGMQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KI +FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVISNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|22758868|gb|AAN05593.1| ribosomal protein S4 [Argopecten irradians]
Length = 259
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/263 (64%), Positives = 205/263 (77%), Gaps = 7/263 (2%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
+K +KRL APK WMLDKL G FAP+PS+GPHK RECLP+I+ LRNRLKYALTY EV I+
Sbjct: 4 RKSMKRLTAPKSWMLDKLSGVFAPRPSTGPHKLRECLPMIVFLRNRLKYALTYDEVKKIV 63
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
QR + VD KVRT K YPAGFMDV++I KTNENFRLLYD KGRF +H I+ EEAK
Sbjct: 64 NQRLIKVDGKVRTAKDYPAGFMDVITIEKTNENFRLLYDVKGRFTVHRIKPEEAK----- 118
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLC+V+ V G KG+P + T+D RTIRYPDPL K NDTI +D+ T K+ EFIKFD G
Sbjct: 119 --YKLCRVKRVTVGAKGVPMLTTHDARTIRYPDPLAKVNDTIMVDIATGKMKEFIKFDSG 176
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
N+ M+TGG N GRVG+I++RE+H GSF+ +HI+DALGH FATRL VF IGKG KPW+SL
Sbjct: 177 NLCMITGGHNLGRVGVIQHRERHPGSFDIVHIKDALGHTFATRLSYVFVIGKGNKPWISL 236
Query: 246 PKGKGIKLSIIEEARKRQALATS 268
P+GKG+KLSI EE +R A +S
Sbjct: 237 PRGKGVKLSIAEERDRRMAAKSS 259
>gi|61654708|gb|AAX48880.1| S4 [Suberites domuncula]
Length = 261
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 206/262 (78%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL+APKHWMLDKL G FAP+PS GPHK REC+PL++ LRNRLKYALT E
Sbjct: 1 MPRGPKKHLKRLHAPKHWMLDKLSGKFAPRPSPGPHKLRECIPLVVFLRNRLKYALTADE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VDAKVRTD T+PAGFMDVVSI KT ENFRLLYD KGRF +H I EEA
Sbjct: 61 VKRIVKQRLIKVDAKVRTDPTFPAGFMDVVSIDKTGENFRLLYDIKGRFTVHRISPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR +Q G+KGIPY T+DGRTIRYPDP+I NDT+++DL T KIT+ I
Sbjct: 120 ------SYKLXKVRRIQLGKKGIPYCVTHDGRTIRYPDPVINVNDTVRIDLSTGKITDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN+VMVTGGRN GRVGII NRE+H GSF+ IH++DA G FATR+ NVF IGKG K
Sbjct: 174 KFDIGNLVMVTGGRNLGRVGIITNRERHHGSFDIIHVKDAAGKSFATRMTNVFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
VS+P+ KGI+L+I EE +R
Sbjct: 234 AMVSIPRQKGIRLTIAEERDRR 255
>gi|260949501|ref|XP_002619047.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
gi|238846619|gb|EEQ36083.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
Length = 262
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/265 (66%), Positives = 207/265 (78%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ HV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I EE
Sbjct: 61 VKAILMQEHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDIKGRFTVHRITAEEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ + G+K IPY+ T+DGRTIRYPDP I+ANDT+K+DL T KIT+FI
Sbjct: 120 ------SYKLGKVKKIALGKKAIPYVVTHDGRTIRYPDPAIRANDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGG+N GRVG+I +REKH+G F+ +HI+DAL + F TR NVF +G +
Sbjct: 174 KFDTGRLVMVTGGKNLGRVGVIVHREKHEGGFDLVHIKDALDNTFVTRQSNVFVVGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R+A
Sbjct: 234 KPWVSLPKGKGIKLSIAEERDRRRA 258
>gi|255714348|ref|XP_002553456.1| 40S ribosomal protein S4 [Lachancea thermotolerans]
gi|238934836|emb|CAR23018.1| KLTH0D17248p [Lachancea thermotolerans CBS 6340]
Length = 261
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 210/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRT+RYPDP IK NDT+K+DL + KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKKGVPYVVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GRVG I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ ++
Sbjct: 174 KFDTGKLVYVTGGRNLGRVGSIVHRERHEGGFDLVHIKDSLDNTFVTRLNNVFVIGEPSR 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKL+I EE +R+A
Sbjct: 234 PYISLPKGKGIKLTIAEERDRRRA 257
>gi|440911356|gb|ELR61037.1| hypothetical protein M91_01196, partial [Bos grunniens mutus]
Length = 269
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 207/266 (77%), Gaps = 9/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGA--FAPKPSSGPHKSRECLPLILILRNRLKYALTY 58
MA G KKHLK ++APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT
Sbjct: 8 MAWGSKKHLKHVSAPKHWMLDKLTGVNVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTG 67
Query: 59 REVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
EV I MQR +D KV TD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EE
Sbjct: 68 DEVKKICMQRFTKIDGKVCTDITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEE 127
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
AK +KLCKVR + G KGIP++ T+D RTIRYPDPLIK N TI++DLET KIT+
Sbjct: 128 AK-------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITD 180
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
FIKFD GN+ MVTGG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG
Sbjct: 181 FIKFDTGNLCMVTGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKG 240
Query: 239 TKPWVSLPKGKGIKLSIIEEARKRQA 264
KPW+SLP+GKGI L+I EE KR A
Sbjct: 241 NKPWISLPRGKGICLTIAEEREKRLA 266
>gi|383862866|ref|XP_003706904.1| PREDICTED: 40S ribosomal protein S4-like [Megachile rotundata]
Length = 262
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/264 (66%), Positives = 206/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITINKTGEFFRLIYDVKGRFTTHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ T I +FI
Sbjct: 121 -------YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIATGTILDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKGTK
Sbjct: 174 RFDSGNLCMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLP+ KG+KLSI EE KR A
Sbjct: 234 PYISLPRDKGVKLSIAEERDKRLA 257
>gi|237862674|gb|ACR24962.1| ribosomal protein S4 [Lepidochitona cinerea]
Length = 253
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/256 (66%), Positives = 205/256 (80%), Gaps = 7/256 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG +KH+KRL APKHWMLDKLGG FAP+ S+GPHK RECLPLI+ LRNRLKYALTY EV
Sbjct: 4 RGHRKHMKRLTAPKHWMLDKLGGVFAPRASTGPHKLRECLPLIVFLRNRLKYALTYVEVK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ QR + VD KVRTD +PAGFMDV++I KT ENFRL+YD KGRF +H I+ EEAK
Sbjct: 64 KIVKQRLIKVDGKVRTDMGFPAGFMDVITIEKTAENFRLIYDVKGRFTVHRIKPEEAK-- 121
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
+KLCKVR VQ G KG+P + T+DGRTIRYPDPL+K NDT+ LD+ T+KI +FIKF
Sbjct: 122 -----YKLCKVRRVQTGPKGVPMLYTHDGRTIRYPDPLVKVNDTVLLDIATSKIKDFIKF 176
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
D GN+ M+TGG N GRVG I +RE+H GSF+ +H++D+LGH FATRL VF IGKG KPW
Sbjct: 177 DSGNLCMITGGHNLGRVGTITHRERHPGSFDIVHVKDSLGHSFATRLSYVFIIGKGNKPW 236
Query: 243 VSLPKGKGIKLSIIEE 258
VSLP+GKG++LSI E+
Sbjct: 237 VSLPRGKGVRLSIAEK 252
>gi|340975701|gb|EGS22816.1| 40S ribosomal protein S4-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 264
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/258 (66%), Positives = 207/258 (80%), Gaps = 8/258 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH KRL+AP HW+LDKL GA+AP+PS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MARGPKKHQKRLSAPSHWLLDKLSGAYAPRPSTGPHKLRDCMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I DEEAK
Sbjct: 61 TKAIMMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRITDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLET KIT+FI
Sbjct: 121 -------YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M+TGGRN GRVG+I +RE+H G F +H++DAL + FATR NVF IG K
Sbjct: 174 KFDTGALAMITGGRNMGRVGVITHRERHDGGFGIVHLKDALDNTFATRESNVFVIGS-EK 232
Query: 241 PWVSLPKGKGIKLSIIEE 258
PW+SLPKGKG+KL+I EE
Sbjct: 233 PWISLPKGKGVKLTIAEE 250
>gi|264667395|gb|ACY71283.1| ribosomal protein S4 [Chrysomela tremula]
Length = 261
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 209/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDSNYPAGFMDVITIEKTGEFFRLIYDVKGRFAVHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G K IP++ T+DGRT+RYPDP IK NDTI++++ T+KI ++I
Sbjct: 121 -------YKLCKVRRVQTGPKNIPFLVTHDGRTLRYPDPNIKVNDTIQMEIATSKILDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG K
Sbjct: 174 KFESGNLCMITGGRNLGRVGTVMNRERHPGSFDIVHVKDANGHVFATRLHNVFIIGKGAK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
+VSLP+GKGIKLSI EE KR A T
Sbjct: 234 AFVSLPRGKGIKLSIAEERDKRLAAKT 260
>gi|28204665|gb|AAO37286.1| ribosomal protein S4 [Pan paniscus]
gi|28204673|gb|AAO37287.1| ribosomal protein S4 [Pan troglodytes]
Length = 262
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 206/269 (76%), Gaps = 7/269 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIK
Sbjct: 120 ------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KP
Sbjct: 174 FDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKP 233
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
W+SLP+GKGI+L++ E KR A S+
Sbjct: 234 WISLPRGKGIRLTVAAERDKRLATKQSSG 262
>gi|296484630|tpg|DAA26745.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 263
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 174/270 (64%), Positives = 206/270 (76%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK + APKHWMLD+L G FAP+PS+GPHK RECLPL + LRNRLKYALT E
Sbjct: 1 MARGPKKHLKYVAAPKHWMLDELTGVFAPRPSTGPHKLRECLPLFIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR +D KV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFTKIDGKVCTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N TI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG K
Sbjct: 174 KFDTGNLCMVTGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI L+I EE KR A S+
Sbjct: 234 PWISLPRGKGICLTIAEERDKRLAAKQSSG 263
>gi|118573852|sp|Q4GXU6.1|RS4_CARGR RecName: Full=40S ribosomal protein S4
gi|70909481|emb|CAJ17165.1| ribosomal protein S4e [Carabus granulatus]
Length = 261
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 174/267 (65%), Positives = 209/267 (78%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YP+GFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPSGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI+L++ +KI + I
Sbjct: 121 -------YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPIIKVNDTIQLEIANSKIMDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FA RL NVF IGKG+K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHTFANRLNNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
+VSLP+GKG+KLSI EE KR A T
Sbjct: 234 AYVSLPRGKGVKLSIAEERDKRLAAKT 260
>gi|367021618|ref|XP_003660094.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
42464]
gi|347007361|gb|AEO54849.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
42464]
Length = 262
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/269 (63%), Positives = 211/269 (78%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I++EEAK
Sbjct: 61 TKAIMMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQEEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLET KIT+FI
Sbjct: 121 -------YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M+TGGRN GRVG+I +RE+H G F +H++DA+ + F TR NVF IG K
Sbjct: 174 KFDTGAIAMITGGRNMGRVGVITHRERHDGGFGIVHLKDAIDNTFTTRESNVFVIGT-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PWVSLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWVSLPKGKGVKLTIAEERDRRRAQALAG 261
>gi|149239787|ref|XP_001525769.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449892|gb|EDK44148.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 264
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 211/269 (78%), Gaps = 11/269 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL GA+APK S+GPHK RE LPL++ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGAYAPKSSAGPHKLRESLPLVIFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ+HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQQHVQVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++GIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+
Sbjct: 120 ------SYKLGKVKKVQLGKRGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GR+G I +REKH+G F+ +HI+DAL F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNMGRIGTIVHREKHEGGFDLVHIKDALERTFVTRLNNVFVIGEEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEE---ARKRQAL 265
KPWVSLPKGKGIKLSI EE AR+++ L
Sbjct: 234 KPWVSLPKGKGIKLSITEERDRARQQRGL 262
>gi|66517407|ref|XP_623050.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Apis mellifera]
gi|380027232|ref|XP_003697333.1| PREDICTED: 40S ribosomal protein S4-like [Apis florea]
Length = 262
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/264 (66%), Positives = 206/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDANYPAGFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ T KI + I
Sbjct: 121 -------YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKGTK
Sbjct: 174 RFDSGNLCMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLP+ KG+KLSI EE KR A
Sbjct: 234 PYISLPRDKGVKLSIAEERDKRLA 257
>gi|367012660|ref|XP_003680830.1| 40S ribosomal protein S4 [Torulaspora delbrueckii]
gi|359748490|emb|CCE91619.1| hypothetical protein TDEL_0D00350 [Torulaspora delbrueckii]
Length = 261
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/264 (66%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSQGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTFPAGFMDVISLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPYI T+DGRTIRYPDP IK ND++K+DL + KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKKGIPYIVTHDGRTIRYPDPNIKINDSVKIDLASGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDTGKLVFVTGGRNLGRIGTIIHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKLSI EE +R+A
Sbjct: 234 PYISLPKGKGIKLSIAEERDRRRA 257
>gi|325184655|emb|CCA19147.1| 40S ribosomal protein S4 putative [Albugo laibachii Nc14]
Length = 261
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 171/263 (65%), Positives = 207/263 (78%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KHLKRL+APKHWML KL G +AP+PSSGPHK RECLPLI+ILRNRLKYALT +E
Sbjct: 1 MPRGPRKHLKRLSAPKHWMLGKLDGVWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ+ V VD K+R D +PAGFMD+V IPK+ + FRLLYDTKGRF LH + EE K
Sbjct: 61 VTMICMQKAVKVDGKIRVDPNFPAGFMDIVEIPKSGDQFRLLYDTKGRFVLHRVNHEEKK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV ++ +KGIPY+ T DGRTIRYPDPL+K+NDT+K+DLET KI +FI
Sbjct: 121 -------YKLCKVIRQEYTKKGIPYVATNDGRTIRYPDPLVKSNDTVKIDLETGKIVDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+VMVT GRN G VG++ E+H+GSF I+D+ GHEFATRLGNVF IG G++
Sbjct: 174 KFETGNLVMVTRGRNTGIVGMLHQIERHEGSFSIARIRDSTGHEFATRLGNVFAIGNGSR 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PW+SLPKGKGIKLSI+EE R+
Sbjct: 234 PWISLPKGKGIKLSILEERSVRE 256
>gi|449016469|dbj|BAM79871.1| 40S ribosomal protein S4 [Cyanidioschyzon merolae strain 10D]
Length = 257
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 172/265 (64%), Positives = 212/265 (80%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWML KLGG +AP+PS+GPHK RECLPLI+ILRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPRHWMLAKLGGIWAPRPSAGPHKLRECLPLIIILRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ ILMQR V VD KVRTD+T+PAGFMDV+ I KTNE FRLLYDTKGRF LH I EE K
Sbjct: 61 AMQILMQRLVRVDGKVRTDRTFPAGFMDVIHIEKTNETFRLLYDTKGRFVLHRITPEEGK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+++ Q G +GIPYI T+DGRTIRYPDPLIK +DT+ LD+ET KIT+F+
Sbjct: 121 -------YKLCRIKRQQLGARGIPYIVTHDGRTIRYPDPLIKVHDTVVLDIETGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+G + M+TGG N GRVG++++RE+H G+ E +H++DA G EFAT++ NVF IG+ K
Sbjct: 174 KFDIGALCMITGGHNIGRVGVVQHRERHPGATEIVHLKDAAGREFATQISNVFVIGR-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
VSLP+GKG+KLS++EE +R L
Sbjct: 233 SLVSLPRGKGVKLSVVEERERRGLL 257
>gi|366998792|ref|XP_003684132.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
gi|366999745|ref|XP_003684608.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
gi|357522428|emb|CCE61698.1| hypothetical protein TPHA_0B00260 [Tetrapisispora phaffii CBS 4417]
gi|357522905|emb|CCE62174.1| hypothetical protein TPHA_0C00170 [Tetrapisispora phaffii CBS 4417]
Length = 261
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLASGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKLSI EE +R+A
Sbjct: 234 PFISLPKGKGIKLSISEERDRRRA 257
>gi|340720134|ref|XP_003398498.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
terrestris]
gi|340720136|ref|XP_003398499.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
terrestris]
gi|350408329|ref|XP_003488370.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
impatiens]
gi|350408333|ref|XP_003488371.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
impatiens]
Length = 262
Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 176/264 (66%), Positives = 206/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ T KI + I
Sbjct: 121 -------YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIATGKILDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKGTK
Sbjct: 174 RFDSGNLCMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLP+ KG+KLSI EE KR A
Sbjct: 234 PYISLPRDKGVKLSIAEERDKRLA 257
>gi|444320813|ref|XP_004181063.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
gi|387514106|emb|CCH61544.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
Length = 261
Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH KRL+AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHQKRLSAPHHWMLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VRAIMMQRHVKVDGKVRTDITYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+K +PY+ T+DGRTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------SYKLGKVKKVQLGKKSVPYVVTHDGRTIRYPDPNIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKLSI EE +R+A
Sbjct: 234 PYISLPKGKGIKLSISEERDRRRA 257
>gi|70909485|emb|CAJ17167.1| ribosomal protein S4e [Julodis onopordi]
Length = 261
Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 175/264 (66%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLK ALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKCALTNAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEYFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G KG+P++ T+DGRTIRYPDP+IK NDTI+L++ T+K +FI
Sbjct: 121 -------YKLCKVRKVQTGPKGVPFLVTHDGRTIRYPDPIIKVNDTIQLEIATSKFLDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ N+ M+TGGRN GRVG + NRE+H GSF+ +HI+DA GH FATRL NVF IGKG+K
Sbjct: 174 KFESNNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDANGHVFATRLNNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
+VSLP+GKG+KLSI EE KR A
Sbjct: 234 AFVSLPRGKGVKLSIAEERDKRLA 257
>gi|440893161|gb|ELR46038.1| hypothetical protein M91_16118, partial [Bos grunniens mutus]
Length = 273
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 173/264 (65%), Positives = 204/264 (77%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK + APKHWMLD+L G FAP+PS+GPHK RECLPL + LRNRLKYALT E
Sbjct: 14 MARGPKKHLKYVAAPKHWMLDELTGVFAPRPSTGPHKLRECLPLFIFLRNRLKYALTGDE 73
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR +D KV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EEAK
Sbjct: 74 VKKICMQRFTKIDGKVCTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAK 133
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N TI++DLET KIT+FI
Sbjct: 134 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFI 186
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG K
Sbjct: 187 KFDTGNLCMVTGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNK 246
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKGI L+I EE KR A
Sbjct: 247 PWISLPRGKGICLTIAEERDKRLA 270
>gi|116193489|ref|XP_001222557.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
gi|88182375|gb|EAQ89843.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
Length = 262
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 172/270 (63%), Positives = 211/270 (78%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +AP+PS+GPHK R+C+PLI+ +RNRLKYAL YRE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPRPSAGPHKLRDCMPLIVFVRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+DEEAK
Sbjct: 61 TKAIMMQRLVKVDGKVRTDVTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLET K T+FI
Sbjct: 121 -------YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKATDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H G F +H++DA+ + F TR NVF IG K
Sbjct: 174 KFDTGAIAMVTGGRNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIG-SEK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLPKGKG+KL+I EE R R+ AT A+
Sbjct: 233 PWISLPKGKGVKLTIAEE-RDRKRAATLAS 261
>gi|402075079|gb|EJT70550.1| 40S ribosomal protein S4-A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 261
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 207/264 (78%), Gaps = 8/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +APKPS GPHK RECLPL++ LRNRLKYAL +RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPKPSPGPHKQRECLPLVVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VDAKVRTD TYP GFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLVKVDAKVRTDATYPTGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RT+RYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTVRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GR+G+I +RE+H G F +H++DA+ + FATR NVF +G K
Sbjct: 174 KFDTGAMAMVTGGRNMGRIGVITHRERHHGGFNIVHLKDAIDNTFATRESNVFVVGT-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKGKG+KL+I EE +R+A
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRA 256
>gi|355693324|gb|EHH27927.1| hypothetical protein EGK_18242 [Macaca mulatta]
Length = 264
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 174/271 (64%), Positives = 211/271 (77%), Gaps = 8/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+ ++GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVVAPKHWMLDKLTGVFAPRRATGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGF-MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
V I MQR + +D KVRTD TYPAGF MD++SI KT ENFRL+YDTKGRF +H I EEA
Sbjct: 61 VKKIGMQRFIKIDGKVRTDITYPAGFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
K +KLCKVR + G KGIP++ T+D TI +PDPLIK NDTI++DLET KIT+F
Sbjct: 121 K-------YKLCKVRKIFVGTKGIPHLVTHDAHTIHHPDPLIKVNDTIQIDLETGKITDF 173
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
IKFD GN+ MVTGG N GR+G++ NRE+H GSF+ +H++DA G+ FAT+L N+F IGKG
Sbjct: 174 IKFDTGNLCMVTGGANLGRIGVLTNRERHPGSFDVVHVKDANGNSFATQLSNIFVIGKGN 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
KPW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 KPWISLPRGKGIRLTIAEERDKRLAAKQSSG 264
>gi|440853|dbj|BAA03786.1| ribosomal protein S4 [Drosophila melanogaster]
Length = 261
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 208/267 (77%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL+ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V V KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ Q G KG+P++ T+DGRTIRYPDPLI AND++++D+ + KIT++I
Sbjct: 121 -------YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
P++SLPKGKG+KLSI EE KR A T
Sbjct: 234 PYISLPKGKGVKLSIAEERDKRLAAKT 260
>gi|336368345|gb|EGN96688.1| hypothetical protein SERLA73DRAFT_184826 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381154|gb|EGO22306.1| hypothetical protein SERLADRAFT_472969 [Serpula lacrymans var.
lacrymans S7.9]
Length = 263
Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 172/268 (64%), Positives = 204/268 (76%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RECLPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRECLPLTIFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +I+ QR + VD KVRTD TYP GFMD +SI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTSIVKQRLIKVDGKVRTDATYPTGFMDTISIEKSGEHFRLLYDVKGRFTIHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR V G KG+P++ T+DGRTIRYPDPLIK NDTIK DLE KI +F+
Sbjct: 120 ------SYKLLKVRKVALGAKGVPHVVTHDGRTIRYPDPLIKVNDTIKFDLEQGKIIDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+GTK
Sbjct: 174 KFDTGNIVMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVIGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
PW+SLPKGKG KL+I EE R+RQ A
Sbjct: 234 PWISLPKGKGTKLTISEERDVRRRQRAA 261
>gi|390600199|gb|EIN09594.1| 40S ribosomal protein S4 [Punctularia strigosozonata HHB-11173 SS5]
Length = 263
Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 203/270 (75%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAP WMLDKL G +AP+PS GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLNAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLMIFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQR + VD KVRTD TYP GFMDVV+I K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTAIVMQRLIKVDGKVRTDATYPTGFMDVVTIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR V G KG+PYI T+DGRTIRYPDP IKANDT+K D E NKI +F+
Sbjct: 120 ------SYKLLKVRKVAVGSKGVPYIITHDGRTIRYPDPAIKANDTVKFDFEQNKIVDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
F+ GN+VMVTGGRN GR G+I +REKH G F+ +H++D L FATR+ N+F IG+G K
Sbjct: 174 HFETGNIVMVTGGRNMGRAGVIVHREKHVGGFDIVHVKDTLDRTFATRISNIFVIGEGIK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALATS 268
PWVSLP+GKG KLSI EE R+RQ A +
Sbjct: 234 PWVSLPRGKGTKLSIAEERDVRRRQRAAEA 263
>gi|365986130|ref|XP_003669897.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
gi|343768666|emb|CCD24654.1| hypothetical protein NDAI_0D03400 [Naumovozyma dairenensis CBS 421]
Length = 261
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/264 (64%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT++I
Sbjct: 120 ------SYKLAKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKL+I EE +R+A
Sbjct: 234 PYISLPKGKGIKLTIAEERDRRRA 257
>gi|327353918|gb|EGE82775.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis ATCC 18188]
Length = 302
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/266 (64%), Positives = 208/266 (78%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 41 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNSRE 100
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 101 TNAILMQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEA- 159
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 160 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFI 213
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 214 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRETNVFIIGQ-DK 272
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KLSI EE +R+A+A
Sbjct: 273 PWISLPKGKGVKLSIAEERDRRRAMA 298
>gi|366987631|ref|XP_003673582.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
gi|342299445|emb|CCC67199.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/264 (64%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT++I
Sbjct: 120 ------SYKLAKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKL+I EE +R+A
Sbjct: 234 PYISLPKGKGIKLTIAEERDRRRA 257
>gi|2463335|emb|CAA75242.1| ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 268
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/260 (69%), Positives = 209/260 (80%), Gaps = 10/260 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEF 179
FKLCKVRSVQFGQKGIPY+NTY T Y + + + + + + +
Sbjct: 121 -------FKLCKVRSVQFGQKGIPYLNTYVVPTDTYMATIATRPTSGKRHNQDRSGDQQE 173
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREK--HKGSFETIHIQDALGHEFATRLGNVFTIGK 237
++ G ++ + G R + ++++ KGSFETIH++DALGH+FATRLGNVFTIGK
Sbjct: 174 LRLHQGLMLAMCHGDWRRNTAVWCDQQQGEAKGSFETIHVEDALGHQFATRLGNVFTIGK 233
Query: 238 GTKPWVSLPKGKGIKLSIIE 257
G KPWVSLPKGKGIKLSIIE
Sbjct: 234 GNKPWVSLPKGKGIKLSIIE 253
>gi|403419501|emb|CCM06201.1| predicted protein [Fibroporia radiculosa]
Length = 290
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 205/267 (76%), Gaps = 9/267 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRL AP WMLDKL G +AP+PS GPHK RECLPL + LRNRLKYALT +EV
Sbjct: 29 ARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRECLPLTIFLRNRLKYALTGKEV 88
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
+I+MQR + VDAKVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 89 TSIVMQRLIKVDAKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEA-- 146
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KL KVR + G KG+PYI T+DGRTIRYPDP IK NDT+K DLE KI +F+K
Sbjct: 147 -----TYKLLKVRKMAIGNKGVPYIVTHDGRTIRYPDPAIKVNDTVKFDLEQGKIVDFVK 201
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F +G+G KP
Sbjct: 202 FDTGNIVMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVLGEGIKP 261
Query: 242 WVSLPKGKGIKLSIIEE--ARKRQALA 266
W+SLPKGKG KL+I EE R+RQ A
Sbjct: 262 WISLPKGKGTKLTITEERDVRRRQRAA 288
>gi|154273927|ref|XP_001537815.1| 40S ribosomal protein S4 [Ajellomyces capsulatus NAm1]
gi|150415423|gb|EDN10776.1| ribosomal protein S4 [Ajellomyces capsulatus NAm1]
Length = 262
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/269 (63%), Positives = 209/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A+A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAMALAG 261
>gi|429860169|gb|ELA34915.1| 40s ribosomal protein s4 [Colletotrichum gloeosporioides Nara gc5]
Length = 262
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 169/269 (62%), Positives = 212/269 (78%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL YRE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+I+MQR + VD KVRTD T+PAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TRSIMMQRLIKVDHKVRTDITFPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+T KI +FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G++ MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGSIAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAQALAG 261
>gi|310791164|gb|EFQ26693.1| ribosomal family S4e [Glomerella graminicola M1.001]
Length = 262
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 169/269 (62%), Positives = 212/269 (78%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL +RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+I+MQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TRSIMMQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+T KI +FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G++ MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGSIAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGS-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRANALAG 261
>gi|366997558|ref|XP_003678541.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
gi|342304413|emb|CCC72204.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/264 (64%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT++I
Sbjct: 120 ------TYKLAKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKL+I EE +R+A
Sbjct: 234 PYISLPKGKGIKLTIAEERDRRRA 257
>gi|193610901|ref|XP_001949785.1| PREDICTED: 40S ribosomal protein S4-like [Acyrthosiphon pisum]
Length = 265
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 211/270 (78%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV+SI KT+E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVISIQKTSEHFRLIYDVKGRFTIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDP IK NDTI+ D+ T+KI + I
Sbjct: 121 -------YKLCKVKKVQTGPKGVPFLTTHDGRTIRYPDPNIKVNDTIRYDIATSKILDHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+F+ GN+ M+TGGRN GRVGI+ NRE+H GSF+ +HI+DA H FATR+ NVF IGKG K
Sbjct: 174 RFETGNLCMITGGRNLGRVGIVINRERHPGSFDIVHIKDANEHIFATRMNNVFIIGKGQK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
++SLP+ KG+KL+I EE KR A T ++
Sbjct: 234 NYISLPRSKGVKLTISEERDKRLAAKTKSS 263
>gi|296482862|tpg|DAA24977.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 210/270 (77%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWML+KL G FA +PS+GPHK RECLPLI+ LRNRLK ALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLEKLTGVFALRPSAGPHKLRECLPLIIFLRNRLKCALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG F +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGHFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+F+
Sbjct: 121 -------YKLYKVRKIFMGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFM 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG + GR+G+I +RE+H GSF+ +H++DA G+ FATRL ++F IGKG K
Sbjct: 174 KFDTGNLCMVTGGASLGRIGVITSRERHPGSFDVVHVKDANGNSFATRLSDIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP GKGI+L+I EE KR A+ S+
Sbjct: 234 PWISLPHGKGIRLTIAEERDKRLAVKQSSG 263
>gi|50426545|ref|XP_461869.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
gi|49657539|emb|CAG90330.1| DEHA2G07392p [Debaryomyces hansenii CBS767]
Length = 263
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/264 (64%), Positives = 209/264 (79%), Gaps = 8/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVIFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQEHVKVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++GIPY+ T+DGRTIRYPDPLI+AND++K+DL T K+T+FI
Sbjct: 120 ------SYKLAKVKKVQLGKRGIPYVVTHDGRTIRYPDPLIRANDSVKVDLATGKVTDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
FD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF +G +
Sbjct: 174 SFDTGRLVMVTGGRNMGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFIVGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQ 263
KP +SLPKGKGIKLSI EE +R+
Sbjct: 234 KPHISLPKGKGIKLSISEERDRRR 257
>gi|326523807|dbj|BAJ93074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/272 (63%), Positives = 211/272 (77%), Gaps = 7/272 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP+HWMLDK+GG FAP+PSSGPHK RE LPL+++LR+RLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPRHWMLDKMGGVFAPRPSSGPHKLRESLPLVILLRDRLKYALTRKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD K RTD T+PAGFMDV+SI KTNE FRLLYDTKGRF + I EAK
Sbjct: 61 VTMIMMQRLVKVDGKTRTDNTFPAGFMDVISIEKTNETFRLLYDTKGRFAVQRITPAEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ + G KGIPY++T+DGRTIRYPDP IK +DT+K DLE+ KIT+
Sbjct: 121 -------YKLLKVKKIYTGTKGIPYLSTHDGRTIRYPDPAIKIHDTVKYDLESGKITDIA 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
F++GN+VM+TGG N GRVG+I +RE+H GSF+ IH++DA+G +FATR+ NVF IGKGTK
Sbjct: 174 PFELGNLVMITGGANLGRVGVIVSRERHPGSFDIIHVKDAVGQQFATRMSNVFVIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
VSLP KGIK S++EEA + A AAQ
Sbjct: 234 SLVSLPARKGIKKSVLEEADFARKHAAELAAQ 265
>gi|294889902|ref|XP_002772984.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
gi|239877687|gb|EER04800.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
Length = 268
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/272 (61%), Positives = 210/272 (77%), Gaps = 7/272 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHW+LDKL G +AP+PS+GPHK REC+PLI++LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRVFAPKHWLLDKLAGVWAPRPSTGPHKLRECMPLIVLLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD +YPAGFMDV++I KT ENFRLL+DTKGRF +H I +EA
Sbjct: 61 VKMIVMQRLIKVDGKVRTDMSYPAGFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ V G KG+PY NT+DGRTIRYPDP IK ND++++D++T K+ +F+
Sbjct: 120 ------AYKLCRVKKVYMGSKGVPYANTHDGRTIRYPDPEIKENDSVRVDIQTGKVLDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF++G VM+TGG N GRVG+I +RE+H G+FE IH++DA G+ FATRL NVF IG K
Sbjct: 174 KFEIGATVMMTGGNNIGRVGVITHRERHPGNFEIIHVRDAAGNNFATRLSNVFVIGHEGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
PWVSLPKG G++LS +E+ R A Q
Sbjct: 234 PWVSLPKGDGVQLSTVEDRHMRMKKNRIAGQQ 265
>gi|332017152|gb|EGI57951.1| 40S ribosomal protein S4 [Acromyrmex echinatior]
Length = 286
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 175/263 (66%), Positives = 206/263 (78%), Gaps = 7/263 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV
Sbjct: 26 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEV 85
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I I+MQR + VD K+RTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK
Sbjct: 86 IKIVMQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAK- 144
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ T+KI + I+
Sbjct: 145 ------YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATSKILDSIR 198
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ M+TGGRN GRVG + +RE+H GSF+ HI+DA GH FATRL NVF IGKGTK
Sbjct: 199 FDSGNLCMITGGRNLGRVGTVVSRERHPGSFDICHIKDAQGHTFATRLNNVFIIGKGTKA 258
Query: 242 WVSLPKGKGIKLSIIEEARKRQA 264
+VSLP+ KG+KLSI EE KR A
Sbjct: 259 YVSLPRDKGVKLSIAEERDKRLA 281
>gi|50287861|ref|XP_446360.1| 40S ribosomal protein S4 [Candida glabrata CBS 138]
gi|49525667|emb|CAG59284.1| unnamed protein product [Candida glabrata]
Length = 261
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 169/264 (64%), Positives = 209/264 (79%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T DGRTIRYPDP IK NDT+K+DL + KIT++I
Sbjct: 120 ------SYKLGKVKKVQLGKKGVPYVVTDDGRTIRYPDPNIKVNDTVKVDLASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+G +V +TGGRN GR+G I ++E+H G F+ +H++D+L + F TRL NVF IG+ K
Sbjct: 174 KFDIGKLVYITGGRNLGRIGTIVHKERHDGGFDLVHVKDSLDNTFVTRLNNVFVIGEQGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKL+I EE +R+A
Sbjct: 234 PYISLPKGKGIKLTIAEERDRRRA 257
>gi|221110073|ref|XP_002154886.1| PREDICTED: 40S ribosomal protein S4-like [Hydra magnipapillata]
Length = 259
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/264 (64%), Positives = 204/264 (77%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAPKHWMLDKL G FAP+PS GPHK RECLPLI+ LRNRLKYAL Y E
Sbjct: 1 MTRGPKKHLKRLNAPKHWMLDKLSGNFAPRPSPGPHKLRECLPLIVFLRNRLKYALNYAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VD KVRTD YPAGFMDVVSI +T+ENFRLLYD KGRF + I EE+
Sbjct: 61 VTKIMKQRLIKVDGKVRTDICYPAGFMDVVSIERTHENFRLLYDVKGRFVCNRISAEES- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ GQ IPYI T+DGRTIRYPDP IK NDT+ +D++T KIT+FI
Sbjct: 120 ------AYKLAKVKRSAVGQNSIPYIVTHDGRTIRYPDPSIKVNDTVIVDIKTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VMVT GRN GRVGII NRE+H S++ +H++D G++FATRL N+F IGKG+K
Sbjct: 174 KFDTGNLVMVTAGRNTGRVGIITNRERHPSSYDIVHVKDVTGNQFATRLSNIFLIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P VSLP+GKG++L+I +E +R A
Sbjct: 234 PLVSLPRGKGVRLTIADERDRRMA 257
>gi|261204631|ref|XP_002629529.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
gi|239587314|gb|EEQ69957.1| ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
gi|239614147|gb|EEQ91134.1| ribosomal protein S4 [Ajellomyces dermatitidis ER-3]
Length = 262
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/269 (63%), Positives = 209/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRETNVFIIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A+A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAMALAG 261
>gi|119192028|ref|XP_001246620.1| 40S ribosomal protein S4 [Coccidioides immitis RS]
gi|303313163|ref|XP_003066593.1| 40S ribosomal protein S4 [Coccidioides posadasii C735 delta SOWgp]
gi|240106255|gb|EER24448.1| 40S ribosomal protein S4, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320036517|gb|EFW18456.1| 40S ribosomal protein S4 [Coccidioides posadasii str. Silveira]
gi|392864147|gb|EAS35046.2| 40S ribosomal protein S4 [Coccidioides immitis RS]
Length = 262
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 208/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA
Sbjct: 61 TNAILMQRLVKVDGKVRTDATYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRISGEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGVICMATGGRNMGRVGVITHRERHEGGFGIVHIKDAIDNTFATRESNVFVIGH-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PWVSLPKGKG+KLSI EE +R+A+A +
Sbjct: 233 PWVSLPKGKGVKLSIAEERDRRRAMALAG 261
>gi|171685031|ref|XP_001907457.1| hypothetical protein [Podospora anserina S mat+]
gi|170942476|emb|CAP68128.1| unnamed protein product [Podospora anserina S mat+]
Length = 259
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 169/267 (63%), Positives = 210/267 (78%), Gaps = 8/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G +AP+PS+GPHK R+C+PLI+ +RNRLKYAL +RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGVYAPRPSAGPHKLRDCMPLIVFVRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I DEE+K
Sbjct: 61 TRAILMQRLVKVDGKVRTDMTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIGDEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K++LET KI +FI
Sbjct: 121 -------YKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAIAMVTGGRNMGRVGVITHRERHDGGFNIVHLKDAIDNSFATRETNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
PW+SLPKGKG+KL+I EE +++AL
Sbjct: 233 PWISLPKGKGVKLTIAEERDRKRALGN 259
>gi|148691968|gb|EDL23915.1| mCG1288 [Mus musculus]
Length = 266
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/258 (65%), Positives = 201/258 (77%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP PS+GPHK RECLP I+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPSPSTGPHKLRECLPPIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D K+RT YPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKIRTGFIYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RT RYPDPLIK N TI++DLET K+T+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTTRYPDPLIKVNVTIQIDLETGKVTDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGKSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
W+SLP+GKGI+L+I EE
Sbjct: 234 SWISLPRGKGIRLTIAEE 251
>gi|167045794|gb|ABZ10463.1| ribosomal protein S4, X-linked X isoform (predicted) [Callithrix
jacchus]
Length = 263
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 172/270 (63%), Positives = 205/270 (75%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+ PHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGSKKHLKRVAAPKHWMLDKLTGVFAPRPSTSPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EE K
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEVK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + G KGIP++ T D TIRY DPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVQKIFVGTKGIPHLVTPDAHTIRYHDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ MVT G N GR+G+I NRE+H GSF +H++DA G+ FAT+L N+F IGKG K
Sbjct: 174 RFDTGNLCMVTRGANLGRIGVITNRERHPGSFNVVHVKDANGNSFATQLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLVAKQSSG 263
>gi|296475761|tpg|DAA17876.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 260
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 206/270 (76%), Gaps = 10/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA+G KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MAQGPKKHLKPVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V + MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKMCMQRFIKIDGKVRTDITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D R IRYPDPLIK ND I++DLET+KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARIIRYPDPLIKVNDIIQIDLETSKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGAN---XGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNK 230
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW SLP GKGI L+I EE KR A S+
Sbjct: 231 PWTSLPCGKGICLTIAEERDKRLAAKQSSG 260
>gi|378728164|gb|EHY54623.1| 40S ribosomal protein S4 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 208/270 (77%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+APK S GPHK+R+CLPLI+ LRNRLKY+L RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKTRDCLPLIIFLRNRLKYSLNNRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR + VD KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EA
Sbjct: 61 TTAILMQRLIKVDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRIEQAEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G + MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IGK K
Sbjct: 174 RFDTGVIAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGK-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PWVSLPKGKG+KLSI EE +R+A+ + A
Sbjct: 233 PWVSLPKGKGVKLSIAEERDRRRAVQLANA 262
>gi|294875217|ref|XP_002767227.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
gi|239868773|gb|EEQ99944.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
Length = 268
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/272 (61%), Positives = 210/272 (77%), Gaps = 7/272 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHW+LDKL G +AP+PS+GPHK REC+PLI++LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRVFAPKHWLLDKLAGVWAPRPSTGPHKLRECMPLIVLLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD +YPAGFMDV++I KT ENFRLL+DTKGRF +H I +EA
Sbjct: 61 VKMIVMQRLIKVDGKVRTDMSYPAGFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ V G KG+PY NT+DGRTIRYPDP IK ND++++D++T K+ +F+
Sbjct: 120 ------AYKLCRVKKVYMGSKGVPYANTHDGRTIRYPDPEIKENDSVRIDIQTGKVLDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF++G VM+TGG N GRVG+I +RE+H G+FE IH++DA G+ FATRL NVF IG K
Sbjct: 174 KFEIGATVMMTGGNNIGRVGVITHRERHPGNFEIIHVRDAAGNNFATRLSNVFVIGHEGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
PWVSLPKG G++LS +E+ R A Q
Sbjct: 234 PWVSLPKGDGVQLSTVEDRHLRMKKNRIAGQQ 265
>gi|346977567|gb|EGY21019.1| 40S ribosomal protein S4-A [Verticillium dahliae VdLs.17]
Length = 262
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 168/269 (62%), Positives = 210/269 (78%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+C+PLI+ LRNRLKYAL +RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCMPLIVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+I+MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YD KGRF +H I+ EEA
Sbjct: 61 TRSIMMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H G F IH++DA+ + FATR NVF IG K
Sbjct: 174 KFDTGAIAMVTGGRNMGRVGVITHRERHDGGFNIIHVKDAIDNTFATRESNVFVIGS-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAHAIAG 261
>gi|380487060|emb|CCF38284.1| 40S ribosomal protein S4 [Colletotrichum higginsianum]
Length = 262
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 169/269 (62%), Positives = 211/269 (78%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+CLPLI+ LRNRLKYAL +RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ILMQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TRSILMQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+T KI +FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G++ MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGSIAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPK KG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKSKGVKLTIAEERDRRRANALAG 261
>gi|242211537|ref|XP_002471606.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
gi|220729282|gb|EED83159.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
Length = 263
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 207/268 (77%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYAL +E
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALNGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+I+ QR + VD KVRTD TYPAGFMDV++I K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VISIVAQRLIKVDGKVRTDPTYPAGFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR + G KG+PYI T+DGRTIRYPDPLIK NDT+K DLE +KI +++
Sbjct: 120 ------TYKLLKVRKMAIGTKGVPYIVTHDGRTIRYPDPLIKVNDTVKFDLEQSKILDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F +G+GTK
Sbjct: 174 KFDTGNLVMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVLGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
PWVSLPKGKGIKL+I EE R+RQ A
Sbjct: 234 PWVSLPKGKGIKLTITEERDVRRRQRAA 261
>gi|321450822|gb|EFX62690.1| hypothetical protein DAPPUDRAFT_300650 [Daphnia pulex]
Length = 244
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/250 (68%), Positives = 199/250 (79%), Gaps = 7/250 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLVVFLRNRLKYALNNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDSNYPAGFMDVITIDKTGEYFRLVYDVKGRFAIHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G KGIP+I T+DGRTIRYPDPL+K NDTI+LD+ TNKI +FI
Sbjct: 121 -------YKLCKVRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGGRN GRVG I NRE+H GSF+ +H++DALGH FATRL NVF IGKG+K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTIINRERHPGSFDIVHVKDALGHLFATRLNNVFIIGKGSK 233
Query: 241 PWVSLPKGKG 250
++SLP+ KG
Sbjct: 234 AYISLPRDKG 243
>gi|307191745|gb|EFN75187.1| 40S ribosomal protein S4 [Harpegnathos saltator]
Length = 262
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 205/264 (77%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR + VD K+RTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKILMQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ + KI + I
Sbjct: 121 -------YKLCKVRRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIASGKILDSI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ M+T GRN GRVG + +RE+H GSF+ H++DA GH FATRL NVF IGKGTK
Sbjct: 174 RFDSGNLCMITSGRNLGRVGTVVSRERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
+VSLP+ KG+KLSI EE +R A
Sbjct: 234 AYVSLPRDKGVKLSIAEERDRRLA 257
>gi|332376168|gb|AEE63224.1| unknown [Dendroctonus ponderosae]
Length = 261
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 208/267 (77%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G KGIP++ T+DGRTIRYPDP +K NDTI+L++ T+KI ++I
Sbjct: 121 -------YKLCKVRKVGTGPKGIPFLVTHDGRTIRYPDPNVKVNDTIQLEIATSKILDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ +TGGRN GRVG + NRE+H GSF+ +HI+DA H FATRL NVF IGKG+K
Sbjct: 174 KFESGNLCQITGGRNLGRVGTVVNRERHPGSFDIVHIKDANEHVFATRLNNVFIIGKGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
+VSLP+GKG+KLSI EE KR A T
Sbjct: 234 AFVSLPRGKGVKLSIAEERDKRLASKT 260
>gi|225559261|gb|EEH07544.1| 40S ribosomal protein S4 [Ajellomyces capsulatus G186AR]
gi|240282196|gb|EER45699.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H143]
gi|325088332|gb|EGC41642.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H88]
Length = 262
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/269 (63%), Positives = 208/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYP GFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTYPTGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGAIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A+A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAMALAG 261
>gi|365991206|ref|XP_003672432.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
gi|343771207|emb|CCD27189.1| hypothetical protein NDAI_0J02970 [Naumovozyma dairenensis CBS 421]
Length = 261
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 207/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQRHV VD KVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMQRHVKVDGKVRTDTTYPTGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT++I
Sbjct: 120 ------SYKLAKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V V GGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDAGKLVYVIGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKL+I EE +R+A
Sbjct: 234 PYISLPKGKGIKLTIAEERDRRRA 257
>gi|254584933|ref|XP_002498034.1| 40S ribosomal protein S4 [Zygosaccharomyces rouxii]
gi|238940928|emb|CAR29101.1| ZYRO0G00550p [Zygosaccharomyces rouxii]
Length = 261
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 169/264 (64%), Positives = 207/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGTYAPRPSQGPHKLRESLPLVVFLRNRLKYALNTRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQRHV VD KVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAIMMQRHVKVDGKVRTDSTFPAGFMDVISLDATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIR+PDP +K NDT+K+DL + KI ++I
Sbjct: 120 ------SYKLGKVKKVQLGKKGIPYVVTHDGRTIRFPDPNVKVNDTVKIDLASGKIQDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDTGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKLSI EE +R+A
Sbjct: 234 PYISLPKGKGIKLSITEERDRRRA 257
>gi|320586588|gb|EFW99258.1| 40S ribosomal protein s4 [Grosmannia clavigera kw1407]
Length = 259
Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 168/264 (63%), Positives = 207/264 (78%), Gaps = 8/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +G+KKH KRL+AP HW+LDKL G +APK S GPHKSRECLPLI+ LRNRLKYAL YRE
Sbjct: 1 MGKGMKKHQKRLSAPSHWLLDKLSGVYAPKASPGPHKSRECLPLIIFLRNRLKYALNYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AIL+QR + VD KVRTD TYP GFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILLQRLIKVDHKVRTDTTYPTGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KVR VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+F+
Sbjct: 120 ------EYKLGKVRRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M+TGGRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG K
Sbjct: 174 KFDTGALAMITGGRNMGRVGVITHRERHDGGFNIVHLKDAIDNTFATRESNVFVIGT-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKG+G+KL+I EE +R+A
Sbjct: 233 PWISLPKGRGVKLTIAEERDRRRA 256
>gi|94468404|gb|ABF18051.1| 40S ribosomal protein S4 [Aedes aegypti]
Length = 262
Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 208/270 (77%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQRH+ +D KVRTD YPAGFMDV++I KTNENFRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRHIKIDGKVRTDPNYPAGFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +
Sbjct: 121 -------YKLLKVKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GR G + REKH GSFE +H++DA GH FATRL NVF IGK TK
Sbjct: 174 KFEPGNLCMITGGRNLGRCGTVIQREKHPGSFEIVHVKDATGHVFATRLTNVFIIGKATK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
++SLPKGKG+KLSI EE KR LA+ AA
Sbjct: 234 AFISLPKGKGVKLSIAEERDKR--LASKAA 261
>gi|149287204|gb|ABR23501.1| ribosomal protein S4 [Ornithodoros parkeri]
Length = 262
Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 206/262 (78%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL+APK WMLDKLGG FAP+PS+GPHK RE LPLI++LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLHAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VD KVRTD YPAGFMDV++I KT E FRLLYD KGRF LH I EEAK
Sbjct: 61 VKKIVKQRLIKVDHKVRTDTNYPAGFMDVITIEKTGEFFRLLYDVKGRFVLHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+D T KI ++I
Sbjct: 121 -------YKLCRVKRVQVGPKGVPFLVTHDARTIRYPDPLIKVNDTVKVDQATGKIDDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGG N GRVG I +RE+H GSF+ +H++D+ GH FATRL +F IGKGTK
Sbjct: 174 KFDSGNVCMVTGGHNLGRVGTIMSRERHPGSFDIVHVKDSQGHTFATRLSYIFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P++SLP+GKG+KLS+ EE +R
Sbjct: 234 PYISLPRGKGVKLSVAEERDRR 255
>gi|344304439|gb|EGW34671.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
Length = 262
Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/265 (64%), Positives = 207/265 (78%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ+HV VDAKVRTD T+P GFMDV+++ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQQHVKVDAKVRTDSTFPTGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLI+ NDT+K+DL T KI++FI
Sbjct: 120 ------AYKLGKVKKVQLGKKGIPYVVTHDGRTIRYPDPLIRVNDTVKIDLATGKISDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
FD G +VMVTGGRN GRVG I ++E H G F+ +HI+D+L + F TRL NVF IG +
Sbjct: 174 PFDTGRLVMVTGGRNLGRVGAIVHKEHHAGGFDLVHIKDSLDNTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKL+I EE +R+
Sbjct: 234 KPWVSLPKGKGIKLTISEERDRRRT 258
>gi|121704880|ref|XP_001270703.1| 40S ribosomal protein S4 [Aspergillus clavatus NRRL 1]
gi|119398849|gb|EAW09277.1| 40S ribosomal protein S4, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 356 bits (913), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 206/264 (78%), Gaps = 8/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDVV I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIMMQRLIQVDGKVRTDPTYPAGFMDVVGIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KITEF+
Sbjct: 120 ------EYKLCKVKKVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITEFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G VVMVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 RFDTGVVVMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKGKG+KLSI EE +R+A
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRA 256
>gi|50423849|ref|XP_460509.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
gi|49656178|emb|CAG88822.1| DEHA2F03300p [Debaryomyces hansenii CBS767]
Length = 263
Score = 356 bits (913), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 171/264 (64%), Positives = 208/264 (78%), Gaps = 8/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP HWMLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLDKLSGTYAPRPSAGPHKLRESLPLVIFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQ HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMQEHVKVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++GIPY+ T+DGRTIRYPDPLI+AND++K+DL T KIT+FI
Sbjct: 120 ------SYKLAKVKKVQLGKRGIPYVVTHDGRTIRYPDPLIRANDSVKVDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
FD G +VMVTGGRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF +G +
Sbjct: 174 SFDTGRLVMVTGGRNMGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFIVGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQ 263
KP +SLPKGKGIKLSI EE +R+
Sbjct: 234 KPHISLPKGKGIKLSISEERDRRR 257
>gi|451997437|gb|EMD89902.1| hypothetical protein COCHEDRAFT_1177980 [Cochliobolus
heterostrophus C5]
Length = 262
Score = 356 bits (913), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 175/269 (65%), Positives = 206/269 (76%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KH KRL+AP HW+LDKL GA+APK S GPHK R+ LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPVKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDSLPLIIFLRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR V VD KVRTD T+P G MDV+SI KT ENFRL+YDTKGRF +H I DEEA
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPTGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KI++FI
Sbjct: 120 ------QYKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLSTGKISDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +VMVTGGRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK K
Sbjct: 174 KFDTGVIVMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAYALAG 261
>gi|88703062|ref|NP_001034656.1| 40S ribosomal protein S4, Y isoform 2 [Homo sapiens]
gi|27805713|sp|Q8TD47.3|RS4Y2_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 2
gi|20269858|gb|AAM18074.1|AF497481_1 ribosomal protein S4 [Homo sapiens]
Length = 263
Score = 356 bits (913), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 171/270 (63%), Positives = 205/270 (75%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + +D KVR D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H I EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FI
Sbjct: 121 -------YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MV G N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G K
Sbjct: 174 KFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|326471544|gb|EGD95553.1| 40S ribosomal protein S4 [Trichophyton tonsurans CBS 112818]
gi|326481846|gb|EGE05856.1| 40S ribosomal protein S4 [Trichophyton equinum CBS 127.97]
Length = 259
Score = 356 bits (913), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 170/266 (63%), Positives = 209/266 (78%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ILMQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNSILMQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ T KIT+F+
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PWVSLPKGKG+KL+I EE +R+A+A
Sbjct: 233 PWVSLPKGKGVKLTIAEERDRRRAMA 258
>gi|339245843|ref|XP_003374555.1| 40S ribosomal protein S4 [Trichinella spiralis]
gi|316972227|gb|EFV55914.1| 40S ribosomal protein S4 [Trichinella spiralis]
Length = 263
Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 202/269 (75%), Gaps = 7/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+HWMLDKL G FAP+PS GPHK RECLPLIL +RNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLNAPRHWMLDKLSGTFAPRPSPGPHKLRECLPLILFIRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I+MQR + VD KVRTD TYPAGFMDV++I +T E+FRL+YD KGR+ +H I EE+K
Sbjct: 61 AKKIMMQRLIKVDGKVRTDLTYPAGFMDVITIDRTGEHFRLIYDVKGRYVVHRISHEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
KLCKVR V G K IP I T+DGRTIRYPDPLIKAND+I ++E NKI +F+
Sbjct: 121 -------LKLCKVRKVMVGPKNIPMIITHDGRTIRYPDPLIKANDSIVYNIEKNKIVDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNV MVTGG N GRVGII +RE+H GSF+ +H++D G FATRL +F IGKG
Sbjct: 174 KFDTGNVCMVTGGHNVGRVGIITHRERHPGSFDIVHVRDTTGSTFATRLNYIFVIGKGKD 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
P +SLP KGIKLSI +E KR A T
Sbjct: 234 PLISLPSCKGIKLSIGDERAKRLAAKTKG 262
>gi|189202048|ref|XP_001937360.1| 40S ribosomal protein S4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330932938|ref|XP_003303979.1| 40S ribosomal protein S4 [Pyrenophora teres f. teres 0-1]
gi|187984459|gb|EDU49947.1| 40S ribosomal protein S4-B [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311319705|gb|EFQ87929.1| hypothetical protein PTT_16383 [Pyrenophora teres f. teres 0-1]
Length = 262
Score = 355 bits (912), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 207/269 (76%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KH KRL+AP HW+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPVKHQKRLSAPNHWLLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR V VD KVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H I DEEA
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KI++FI
Sbjct: 120 ------QYKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLTTGKISDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +VMVTGGRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK K
Sbjct: 174 KFDTGVIVMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAYAIAG 261
>gi|451852241|gb|EMD65536.1| hypothetical protein COCSADRAFT_35575 [Cochliobolus sativus ND90Pr]
Length = 262
Score = 355 bits (912), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 206/269 (76%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KH KRL+AP HW+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL RE
Sbjct: 1 MARGPVKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR V VD KVRTD T+P G MDV+SI KT ENFRL+YDTKGRF +H I DEEA
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPTGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KI++FI
Sbjct: 120 ------QYKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLSTGKISDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +VMVTGGRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK K
Sbjct: 174 KFDTGVIVMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAYALAG 261
>gi|29841450|gb|AAP06482.1| SJCHGC06323 protein [Schistosoma japonicum]
gi|226469680|emb|CAX76670.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469684|emb|CAX76672.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469688|emb|CAX76674.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469694|emb|CAX76677.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473022|emb|CAX71197.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473024|emb|CAX71198.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473026|emb|CAX71199.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473028|emb|CAX71200.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 201/261 (77%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IK
Sbjct: 122 ------YKLCKVRKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GN+ MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KP
Sbjct: 176 FEPGNMCMVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKP 235
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
W+SLPK +GI+LSIIEE KR
Sbjct: 236 WISLPKSRGIRLSIIEERDKR 256
>gi|322784955|gb|EFZ11726.1| hypothetical protein SINV_08231 [Solenopsis invicta]
Length = 261
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/263 (66%), Positives = 205/263 (77%), Gaps = 7/263 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+MQR + VD K+RTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK
Sbjct: 61 TKIVMQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ T+KI + I+
Sbjct: 120 ------YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATSKILDSIR 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ M+TGGRN GRVG + +RE+H GSF+ HI+DA GH FATRL NVF IGKGTK
Sbjct: 174 FDSGNLCMITGGRNLGRVGTVVSRERHPGSFDICHIKDAQGHTFATRLNNVFIIGKGTKA 233
Query: 242 WVSLPKGKGIKLSIIEEARKRQA 264
+VSLP+ KG+KLSI EE KR A
Sbjct: 234 YVSLPRDKGVKLSIAEERDKRLA 256
>gi|71000467|ref|XP_754922.1| 40S ribosomal protein S4 [Aspergillus fumigatus Af293]
gi|66852559|gb|EAL92884.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus Af293]
gi|159127935|gb|EDP53050.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/266 (63%), Positives = 207/266 (77%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIMMQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F+
Sbjct: 120 ------EYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G V MVTGGRN GRVGII +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 RFDTGVVCMVTGGRNMGRVGIITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KL+I EE +R+A A
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAYA 258
>gi|169595016|ref|XP_001790932.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
gi|111070616|gb|EAT91736.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
Length = 262
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 207/269 (76%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+APK S GPHK R+ LPL++ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILMQR V VD KVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H I DEEA
Sbjct: 61 VNAILMQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T K+++FI
Sbjct: 120 ------QYKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLSTGKVSDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +VMVTGGRN GRVG+I +RE+H G F +H++DA+ +EF TR NV IGK K
Sbjct: 174 KFDTGVIVMVTGGRNMGRVGVITHRERHDGGFNIVHLKDAVDNEFTTRETNVIVIGK-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAYALAG 261
>gi|226469690|emb|CAX76675.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 201/261 (77%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IK
Sbjct: 122 ------YKLCKVRKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GN+ MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KP
Sbjct: 176 FEPGNMCMVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKP 235
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
W+SLPK +GI+LSIIEE KR
Sbjct: 236 WISLPKSRGIRLSIIEERDKR 256
>gi|226469692|emb|CAX76676.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 201/261 (77%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IK
Sbjct: 122 ------YKLCKVRKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GN+ MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KP
Sbjct: 176 FEPGNMCMVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKP 235
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
W+SLPK +GI+LSIIEE KR
Sbjct: 236 WISLPKSRGIRLSIIEERDKR 256
>gi|395326662|gb|EJF59069.1| 40S ribosomal protein S4 [Dichomitus squalens LYAD-421 SS1]
Length = 261
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/268 (63%), Positives = 206/268 (76%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +I+ QR + VD KVRTD TYPAGFMDV++I K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTSIVQQRLIKVDGKVRTDPTYPAGFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR V G +G+PYI T+DGRTIRYPDP+IK NDT++ D++ KIT+F+
Sbjct: 120 ------TYKLLKVRKVAIGNRGVPYIVTHDGRTIRYPDPVIKVNDTVRFDIDQGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+V +TGGRNRGR G+I +REKH G F+ +H++D+L FATR+ N+F IG+GTK
Sbjct: 174 KFDTGNLVFITGGRNRGRAGVITHREKHVGGFDIVHVKDSLDRTFATRISNIFVIGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
WVSLPKGKGIKL+I EE R++Q A
Sbjct: 234 SWVSLPKGKGIKLTIAEERDVRRKQRAA 261
>gi|323308526|gb|EGA61771.1| Rps4ap [Saccharomyces cerevisiae FostersO]
gi|323354309|gb|EGA86152.1| Rps4ap [Saccharomyces cerevisiae VL3]
Length = 277
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 170/259 (65%), Positives = 205/259 (79%), Gaps = 7/259 (2%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AIL
Sbjct: 22 KKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIL 81
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 82 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA------ 135
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G
Sbjct: 136 -SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAG 194
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
+V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SL
Sbjct: 195 KLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISL 254
Query: 246 PKGKGIKLSIIEEARKRQA 264
PKGKGIKLSI EE +R+A
Sbjct: 255 PKGKGIKLSIAEERDRRRA 273
>gi|385304652|gb|EIF48661.1| 40s ribosomal protein s4 [Dekkera bruxellensis AWRI1499]
Length = 262
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/265 (64%), Positives = 208/265 (78%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG K HLKRL AP HWMLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKHHLKRLAAPNHWMLDKLSGVYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILM+R V VD KVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H I EEA
Sbjct: 61 VKAILMERQVKVDGKVRTDTTFPAGFMDVISLDATNENFRLVYDIKGRFAIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KGIPYI T+DGRTIRYPDP IK D++K+DL+T KI+ FI
Sbjct: 120 ------SYKLAKVKKVQLGKKGIPYIVTHDGRTIRYPDPAIKVGDSVKVDLDTGKISSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT- 239
KF+ G + MVTGGRN GRVG+I ++E+H+G F+ ++I+D+L + F TRL NVF IG+G
Sbjct: 174 KFETGKLAMVTGGRNLGRVGVITHKERHEGGFDLVYIKDSLDNTFITRLNNVFVIGEGAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPW+SLPKGKG+KLSI EE +R+A
Sbjct: 234 KPWISLPKGKGVKLSISEERDRRRA 258
>gi|242812945|ref|XP_002486066.1| 40S ribosomal protein S4 [Talaromyces stipitatus ATCC 10500]
gi|218714405|gb|EED13828.1| 40S ribosomal protein S4, putative [Talaromyces stipitatus ATCC
10500]
Length = 263
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 209/268 (77%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +AP+ S+GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPAHWLLDKMSGTYAPRASAGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLVQVDGKVRTDPTFPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNTFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAYALA 260
>gi|406868524|gb|EKD21561.1| 40S ribosomal protein S4 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 262
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/270 (62%), Positives = 209/270 (77%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL GA+AP+ S GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGAYAPRASPGPHKLRDCMPLIVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIVMQRLIKVDGKVRTDATYPAGFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIGS-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLPKGKG+KLSI EE +R+A A +++
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAHAIASS 262
>gi|327305991|ref|XP_003237687.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
gi|326460685|gb|EGD86138.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
Length = 259
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/266 (63%), Positives = 208/266 (78%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ILMQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNSILMQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PWVSLPKGKG+KL+I EE +R+A+
Sbjct: 233 PWVSLPKGKGVKLTIAEERDRRRAMT 258
>gi|403218384|emb|CCK72874.1| hypothetical protein KNAG_0M00210 [Kazachstania naganishii CBS
8797]
Length = 261
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/264 (64%), Positives = 208/264 (78%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPNHWLLDKLTGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AILM+RHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 61 VKAILMERHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G++G+PY+ T+DGRTIRYPDP IK NDT+K+DL + KI ++I
Sbjct: 120 ------SYKLGKVKKVQLGKRGVPYVVTHDGRTIRYPDPNIKINDTVKIDLASGKIVDYI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ K
Sbjct: 174 KFDTGKLVYVTGGRNLGRIGTIIHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGETGK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P++SLPKGKGIKL+I EE +R+A
Sbjct: 234 PYISLPKGKGIKLTIAEERDRRRA 257
>gi|109509108|gb|ABG34271.1| 40S ribosomal protein S4 [Culex pipiens pallens]
Length = 262
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 209/270 (77%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQRH+ +D KVRTD YPAGFMDV++I KT+ENFRL+YD KGRF +H I EEAK
Sbjct: 61 VTRIVMQRHIKIDGKVRTDINYPAGFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +
Sbjct: 121 -------YKLLKVKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GR G + REKH GSFE +HI+D+ GH FATRL NVF IGKGTK
Sbjct: 174 KFEPGNLCMITGGRNLGRCGTVIQREKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
++SLPKGKG+KLSI EE KR LA+ AA
Sbjct: 234 AFISLPKGKGVKLSIAEERDKR--LASKAA 261
>gi|403302644|ref|XP_003941964.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Saimiri boliviensis boliviensis]
gi|403302646|ref|XP_003941965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Saimiri boliviensis boliviensis]
gi|403302648|ref|XP_003941966.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Saimiri boliviensis boliviensis]
Length = 263
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/270 (64%), Positives = 204/270 (75%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKHLKR+ APKH MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MACGPKKHLKRVAAPKHRMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V + MQ + +D KVR D TYPAGFMDV+SI K ENF L+YDTKGRF + I EEAK
Sbjct: 61 VKKVCMQWFIKIDGKVRADITYPAGFMDVISIDKMGENFHLIYDTKGRFAVRRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
KLCKVR + G KGIP++ T+D RTIRYPDPLI+ NDTI+ DLET KIT+FI
Sbjct: 121 -------HKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIRVNDTIQTDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRTGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|154290538|ref|XP_001545862.1| 40S ribosomal protein S4 [Botryotinia fuckeliana B05.10]
gi|347841950|emb|CCD56522.1| similar to 40S ribosomal protein S4 [Botryotinia fuckeliana]
Length = 262
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/269 (62%), Positives = 208/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS+GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPNHWLLDKLSGAYAPRPSAGPHKLRDCMPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV+ I KT+ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIVMQRLIKVDGKVRTDATYPAGFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPSIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIG-AEK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAHAIAG 261
>gi|256072589|ref|XP_002572617.1| 40S ribosomal protein S4 [Schistosoma mansoni]
gi|360044250|emb|CCD81797.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
Length = 264
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 200/261 (76%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ V G G+PYI T+D RTIRYPDP IK NDTI++D+ T K+ IK
Sbjct: 122 ------YKLCKVKKVLVGHGGVPYIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GN+ MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KP
Sbjct: 176 FEPGNMCMVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKP 235
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
W+SLPK +GI+LSIIEE KR
Sbjct: 236 WISLPKNRGIRLSIIEERDKR 256
>gi|296804264|ref|XP_002842984.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
gi|238845586|gb|EEQ35248.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
Length = 259
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/266 (63%), Positives = 208/266 (78%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ILMQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNSILMQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQTEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPNIRVNDTVKIDIATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHEGGFGIVHIKDAIDNTFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KL+I EE +R+A+
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAMG 258
>gi|212544592|ref|XP_002152450.1| 40S ribosomal protein S4 [Talaromyces marneffei ATCC 18224]
gi|210065419|gb|EEA19513.1| 40S ribosomal protein S4, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/268 (63%), Positives = 209/268 (77%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +AP+ S+GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPAHWLLDKMSGTYAPRASAGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLVQVDGKVRTDPTFPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RT+RYPDPLIK NDT+K+DL T KIT+F+
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTVRYPDPLIKVNDTVKIDLATGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNTFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAQAIA 260
>gi|258573501|ref|XP_002540932.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
gi|237901198|gb|EEP75599.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
Length = 262
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/269 (63%), Positives = 208/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD T+P GFMDV+SI KT ENFRL+YDTKGRF +H I EEA
Sbjct: 61 TNAILMQRLVKVDGKVRTDSTFPTGFMDVISIEKTGENFRLVYDTKGRFTVHRISGEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KI++FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKISDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGVICMVTGGRNMGRVGVITHRERHEGGFGIVHIKDAIDNSFATRESNVFVIGH-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A+A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAVALAG 261
>gi|301101263|ref|XP_002899720.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
gi|262102722|gb|EEY60774.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
Length = 261
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/268 (63%), Positives = 207/268 (77%), Gaps = 7/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KHLKR++APKHWML KL G +AP+PSSGPHK RECLPLI+ILRNRLKYALT +E
Sbjct: 1 MPRGPRKHLKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ+ V VD KVR D +PAGFMDVV +PKT + FRL+YDTKGRF LH I DEE K
Sbjct: 61 VTMICMQKSVKVDGKVRVDPDFPAGFMDVVELPKTGDQFRLMYDTKGRFVLHRISDEEKK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL KV ++ +K IPYI T DGRTIRYPDPLIK DT+K+DLET K+ + I
Sbjct: 121 -------FKLAKVIRQEYTKKAIPYIATNDGRTIRYPDPLIKVGDTVKIDLETGKVVDHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VGN+V +T GRN GRVGI+ N E+H+GSF H++D+ G++FATRLGNVF +GK +
Sbjct: 174 KFEVGNLVTITRGRNSGRVGILHNVERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEAR 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PWVSLPKGKGIKL+I+EE ++ A +
Sbjct: 234 PWVSLPKGKGIKLNILEERELKEKKANN 261
>gi|312371216|gb|EFR19456.1| hypothetical protein AND_22381 [Anopheles darlingi]
Length = 262
Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 171/270 (63%), Positives = 206/270 (76%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQRH+ +D +VRTD YPAGFMDV++I KT ENFRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRHIKIDGRVRTDPNYPAGFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G K +P++ T+DGRTIRYPDP I ND+I+ D+ T K+ E +
Sbjct: 121 -------YKLLKVKRVQIGPKKVPFLLTHDGRTIRYPDPAIHQNDSIQYDIATGKVMEVL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GR G + REKH GSFE +H++DA GH FATRL NVF IGKGTK
Sbjct: 174 KFEPGNLCMITGGRNLGRCGTVMQREKHPGSFEIVHVKDATGHTFATRLSNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
++SLPKGKG+KLSI EE +R LA AA
Sbjct: 234 AFISLPKGKGVKLSISEERDRR--LANKAA 261
>gi|392565330|gb|EIW58507.1| 40S ribosomal protein S4 [Trametes versicolor FP-101664 SS1]
Length = 262
Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 205/266 (77%), Gaps = 9/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +I+ QR + VD KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTSIVKQRLIKVDGKVRTDSTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR V G KG+P++ T+DGRTIRYPDP IK NDT++ D+E +KIT+F+
Sbjct: 120 ------TYKLLKVRKVAIGNKGVPFVTTHDGRTIRYPDPAIKVNDTVRFDIEQSKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ +TGGRNRGR G+I +REKH G F+ +H++D+L FATR+ N+F IG+GTK
Sbjct: 174 KFDTGNLAFITGGRNRGRAGVIVHREKHVGGFDIVHVKDSLERTFATRISNIFVIGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQA 264
WVSLPKGKG+KL+I EE R+R+A
Sbjct: 234 SWVSLPKGKGLKLTIAEERDVRRRRA 259
>gi|238589837|ref|XP_002392136.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
gi|215457775|gb|EEB93066.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
Length = 264
Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 170/271 (62%), Positives = 206/271 (76%), Gaps = 10/271 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+ QR + +D KVRTD+TYP GFMDVVSI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTAIVKQRLIKIDGKVRTDETYPTGFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ V G +G+P+I T+DGRTIRYPDP I NDT+K D++ NKI +F+
Sbjct: 120 ------SYKLLKVKKVALGARGVPHIVTHDGRTIRYPDPSINVNDTVKFDIQQNKIVDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VMVTGGRN GR G+I +R+KH G F+ +H++D+L FATRL N+F IG+GTK
Sbjct: 174 KFDTGNIVMVTGGRNMGRAGVIVHRKKHIGDFDIVHVKDSLDRTFATRLSNIFVIGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE---ARKRQALATS 268
PW+SLPKGKG KL+I EE RKR A A++
Sbjct: 234 PWISLPKGKGTKLTIAEERDVRRKRAAEAST 264
>gi|315047114|ref|XP_003172932.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
gi|311343318|gb|EFR02521.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
Length = 259
Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 168/266 (63%), Positives = 208/266 (78%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+PS GPHK R+CLPLI+ LRNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ILMQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TNSILMQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ T KIT+++
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KL+I EE +R+A+A
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAMA 258
>gi|259482360|tpe|CBF76769.1| TPA: 40S ribosomal protein S4, putative (AFU_orthologue;
AFUA_3G06840) [Aspergillus nidulans FGSC A4]
Length = 261
Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 206/266 (77%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIMMQRLIQVDGKVRTDPTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F
Sbjct: 120 ------EYKLCKVKKVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFC 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G V MVTGGRN GRVG++ +RE+H G F +H++DA+ + FATR NVF IG+ K
Sbjct: 174 RFDTGVVCMVTGGRNMGRVGVVTHRERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KLSI EE +R+A A
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAYA 258
>gi|108861826|gb|ABG21815.1| 40S ribosomal protein S4-like protein [Schistosoma mansoni]
Length = 264
Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 200/261 (76%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG +KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ V G G+PYI T+D RTIRYPDP IK NDTI++D+ T K+ IK
Sbjct: 122 ------YKLCKVKKVLVGHGGVPYIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GN+ MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK +P
Sbjct: 176 FEPGNMCMVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNQP 235
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
W+SLPK +GI+LSIIEE KR
Sbjct: 236 WISLPKNRGIRLSIIEERDKR 256
>gi|452987335|gb|EME87091.1| hypothetical protein MYCFIDRAFT_162640 [Pseudocercospora fijiensis
CIRAD86]
Length = 262
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 170/268 (63%), Positives = 208/268 (77%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+APK S GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I +EEA
Sbjct: 61 VKQIVMQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITEEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K++LET KI +FI
Sbjct: 120 ------QYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVNLETGKIDDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ K
Sbjct: 174 RFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRETNVFVIGR-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAYALA 260
>gi|392589813|gb|EIW79143.1| 40S ribosomal protein S4 [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 170/265 (64%), Positives = 200/265 (75%), Gaps = 9/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYAL+ E
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALSGSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VD KVRTD TYPAGFMD +SI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTKIVKQRLIKVDGKVRTDNTYPAGFMDTISIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR V G K +PYI T+DGRTIRYPDPLIK NDT+K DLE NKI EF
Sbjct: 120 ------SYKLLKVRKVAVGAKSVPYIVTHDGRTIRYPDPLIKVNDTVKFDLEQNKILEFA 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VMVTGGRN GR G+I +RE+H G F+ +H++D+L FATR+ N+F IG+G K
Sbjct: 174 KFDTGNLVMVTGGRNMGRAGVITHRERHIGDFDIVHVKDSLDRTFATRISNIFVIGEGNK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQ 263
PW+SLPKGKG+KL+I EE R+RQ
Sbjct: 234 PWISLPKGKGVKLTISEERDMRRRQ 258
>gi|156035911|ref|XP_001586067.1| 40S ribosomal protein S4 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154698564|gb|EDN98302.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 262
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 167/269 (62%), Positives = 207/269 (76%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+AP+ S+GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPNHWLLDKLSGAYAPRASAGPHKLRDCMPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR + VD KVRTD TYPAGFMDV+ I KT+ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLIKVDGKVRTDATYPAGFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+FI
Sbjct: 120 ------EYKLAKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIG-AEK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAHAIAG 261
>gi|119493023|ref|XP_001263767.1| 40S ribosomal protein S4 [Neosartorya fischeri NRRL 181]
gi|119411927|gb|EAW21870.1| 40S ribosomal protein S4, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 206/266 (77%), Gaps = 8/266 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIMMQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F+
Sbjct: 120 ------EYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G V MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 RFDTGVVCMVTGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
PW+SLPKGKG+KL+I EE +R+A A
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAYA 258
>gi|361125389|gb|EHK97435.1| putative 40S ribosomal protein S4-B [Glarea lozoyensis 74030]
Length = 262
Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 167/269 (62%), Positives = 209/269 (77%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS+GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSAGPHKLRDCMPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIVMQRLIKVDGKVRTDATYPAGFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVTGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG K
Sbjct: 174 KFDTGVIAMVTGGRNIGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIGS-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAHAIAG 261
>gi|393233644|gb|EJD41214.1| hypothetical protein AURDEDRAFT_186691 [Auricularia delicata
TFB-10046 SS5]
Length = 361
Score = 352 bits (904), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 167/272 (61%), Positives = 205/272 (75%), Gaps = 9/272 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
+ARG +KHLKRL AP WMLDKL G +AP+PS GPHK RE PL ++LRNRLKYA+T RE
Sbjct: 97 LARGPRKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESFPLTILLRNRLKYAITGRE 156
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL+QR V VD KVRTD TYP GFMDV+S+ +T E+FR+LYD KGRF +H I EEA
Sbjct: 157 VTKILLQRLVKVDGKVRTDDTYPTGFMDVISLERTGEHFRILYDVKGRFVIHRITAEEA- 215
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR V G +G+PYI T+DGRTIRYPDPLI+ NDT+K D+E NKI +F+
Sbjct: 216 ------SYKLLKVRRVALGARGVPYIVTHDGRTIRYPDPLIRTNDTVKFDIEQNKIVDFV 269
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+V+VTGGRN GR G+I +RE H G F+ +H++D+L FATR+ N+F IG+GTK
Sbjct: 270 KFDTGNIVIVTGGRNMGRAGVITHREHHHGGFDIVHVRDSLDRTFATRISNIFVIGEGTK 329
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALATSAA 270
PW+SLPKGKG KL+I EE R+RQ A A
Sbjct: 330 PWISLPKGKGTKLTISEERDVRRRQKAAALEA 361
>gi|170034084|ref|XP_001844905.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
gi|167875313|gb|EDS38696.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
Length = 263
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 208/269 (77%), Gaps = 9/269 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT EV
Sbjct: 3 ARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNNEV 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+MQRH+ +D KVRTD YPAGFMDV++I KT+ENFRL+YD KGRF +H I EEAK
Sbjct: 63 TRIVMQRHIKIDGKVRTDINYPAGFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KL KV+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +K
Sbjct: 122 ------YKLLKVKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GN+ M+TGGRN GR G + REKH GSFE +HI+D+ GH FATRL NVF IGKGTK
Sbjct: 176 FEPGNLCMITGGRNLGRCGTVIQREKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKGTKA 235
Query: 242 WVSLPKGKGIKLSIIEEARKRQALATSAA 270
++SLPKGKG+KLSI EE KR LA+ AA
Sbjct: 236 FISLPKGKGVKLSIAEERDKR--LASKAA 262
>gi|226469686|emb|CAX76673.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 352 bits (903), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 200/261 (76%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG +KHLKRLNA KHWMLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E
Sbjct: 3 VRGNRKHLKRLNASKHWMLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTEC 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK
Sbjct: 63 TKILAQRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IK
Sbjct: 122 ------YKLCKVRKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GN+ MVTGGRN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KP
Sbjct: 176 FEPGNMCMVTGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKP 235
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
W+SLPK +GI+LSIIEE KR
Sbjct: 236 WISLPKSRGIRLSIIEERDKR 256
>gi|348666498|gb|EGZ06325.1| hypothetical protein PHYSODRAFT_356144 [Phytophthora sojae]
Length = 261
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/268 (63%), Positives = 207/268 (77%), Gaps = 7/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KHLKR++APKHWML KL G +AP+PSSGPHK RECLPLI+ILRNRLKYALT +E
Sbjct: 1 MPRGPRKHLKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ+ V VD KVR D +PAGFMDVV +PKT + FRLLYDTKGRF LH I DEE K
Sbjct: 61 VTMICMQKSVKVDGKVRVDPDFPAGFMDVVELPKTGDQFRLLYDTKGRFVLHRISDEEKK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL KV ++ +K IPYI T DGRTIRYPDPLIK DT+K+DLET K+ + I
Sbjct: 121 -------FKLAKVIRQEYTKKAIPYIATNDGRTIRYPDPLIKVGDTVKIDLETGKVVDHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VGN+V +T GRN GRVGI+ + E+H+GSF H++D+ G++FATRLGNVF +GK +
Sbjct: 174 KFEVGNLVTITRGRNSGRVGILHHIERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEAR 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PWVSLPKGKGIKL+I+EE ++ A +
Sbjct: 234 PWVSLPKGKGIKLNILEERELKEKKANN 261
>gi|198415701|ref|XP_002127921.1| PREDICTED: similar to ribosomal protein S4, X-linked X [Ciona
intestinalis]
Length = 259
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/264 (64%), Positives = 201/264 (76%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPKHWMLDKL G FAP+PS+GPHK RECLPL + LRNRL YALTY E
Sbjct: 1 MARGPKKHLKRLNAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLCIFLRNRLHYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
ILMQR V VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I +EAK
Sbjct: 61 TKRILMQRLVKVDGKVRTDTTYPAGFMDVITIDKTAEYFRLIYDVKGRFAVHRITSDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V KG+PY+ T+D RTIRYP+P IK +DT+ +D+ + KIT F+
Sbjct: 121 -------YKLCKVKKVATAPKGVPYLVTHDARTIRYPNPDIKVHDTVVVDIASGKITGFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
D GN+ M+TGG N GRVG + +RE+H GSF+ IH++DALGH FATRL NVF IG+ K
Sbjct: 174 HLDSGNMCMITGGHNLGRVGTVMHRERHPGSFDIIHVKDALGHTFATRLSNVFIIGQANK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P VSLP+GKGIKL+I EE +R A
Sbjct: 234 PMVSLPRGKGIKLTIAEERDRRLA 257
>gi|389646755|ref|XP_003721009.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
gi|86196449|gb|EAQ71087.1| hypothetical protein MGCH7_ch7g494 [Magnaporthe oryzae 70-15]
gi|351638401|gb|EHA46266.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
Length = 262
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 203/264 (76%), Gaps = 8/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL AP HW+LDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLAAPSHWLLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AILMQR V VD KVRTD TYPAGFMDVVSI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLVKVDGKVRTDSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++L+T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKINLDTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + MVT G N GRVG+I +RE+H G F +H++DA+ + F TR NVF IG K
Sbjct: 174 KFDTGALAMVTAGNNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKGKG+KL+I EE +R+A
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRA 256
>gi|359496057|ref|XP_003635141.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
[Vitis vinifera]
Length = 205
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/211 (81%), Positives = 186/211 (88%), Gaps = 7/211 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA+GLKKHLKRLNAPKHWM DKLGGAFAPKPS P KS E LPLILIL NRLKYALTYRE
Sbjct: 1 MAKGLKKHLKRLNAPKHWMFDKLGGAFAPKPSYRPQKSWERLPLILILWNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQ+HV VD KVR DKTYP+GFMDVVSIPK N+NFRLLYDTKGRF LH +R+EEAK
Sbjct: 61 VIAILMQQHVFVDGKVRIDKTYPSGFMDVVSIPKKNKNFRLLYDTKGRFXLHLVRNEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL KV SVQ GQKGIPY+NTYD RTIRYP+PLIKANDT KLDL++NKIT+FI
Sbjct: 121 -------FKLWKVXSVQLGQKGIPYLNTYDERTIRYPNPLIKANDTTKLDLKSNKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGS 211
KFDVGNVVMVTGGRNRGRVG+IKNREKHKG+
Sbjct: 174 KFDVGNVVMVTGGRNRGRVGVIKNREKHKGN 204
>gi|170086746|ref|XP_001874596.1| 40S ribosomal protein S4 [Laccaria bicolor S238N-H82]
gi|164649796|gb|EDR14037.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/258 (64%), Positives = 200/258 (77%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+ QR + +D KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTAIVKQRLIKIDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KVR V G +G+P+I T+DGRTIRYPDPLI+ NDT+K DLE KIT+++
Sbjct: 120 ------NYKLLKVRRVAIGARGVPHIVTHDGRTIRYPDPLIQVNDTVKFDLEQGKITDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VM+TGGRN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G K
Sbjct: 174 KFDTGNIVMITGGRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRVTNIFVIGEGIK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
PW+SLPKGKG KL+I EE
Sbjct: 234 PWISLPKGKGTKLTISEE 251
>gi|145245281|ref|XP_001394908.1| 40S ribosomal protein S4 [Aspergillus niger CBS 513.88]
gi|134079606|emb|CAK40823.1| unnamed protein product [Aspergillus niger]
gi|350631620|gb|EHA19991.1| hypothetical protein ASPNIDRAFT_199495 [Aspergillus niger ATCC
1015]
gi|358369177|dbj|GAA85792.1| 40S ribosomal protein S4 [Aspergillus kawachii IFO 4308]
Length = 258
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/265 (62%), Positives = 204/265 (76%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPKKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAIMMQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KI +F+
Sbjct: 120 ------EYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKIADFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G V M TGGRN GRVG++ +RE+H G F +HI+DA+ + FATR NVF IG+ K
Sbjct: 174 KFDTGVVAMATGGRNMGRVGVVTHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
PW+SLPKGKG+KLSI EE +R+AL
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAL 257
>gi|405967288|gb|EKC32468.1| 40S ribosomal protein S4, X isoform [Crassostrea gigas]
Length = 243
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/250 (67%), Positives = 198/250 (79%), Gaps = 7/250 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGG FAP+PS+GPHK RE LPLI+ LRNRLKYALTY EV I MQR + VDAKVRT
Sbjct: 1 MLDKLGGVFAPRPSTGPHKLRESLPLIVFLRNRLKYALTYDEVKKITMQRLIKVDAKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DK +P GFMDV+SI KTNENFRLLYD KGRF +H I+ EEAK +KLC+VR V
Sbjct: 61 DKNFPTGFMDVISIEKTNENFRLLYDVKGRFTVHRIQKEEAK-------YKLCRVRKVGV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
KG+PYI T+DGRTIRYPDPL+K NDT+ LD+ T KI +FIKFD GN+ MVTGG N GR
Sbjct: 114 AAKGVPYITTHDGRTIRYPDPLVKVNDTVMLDIGTGKIKDFIKFDSGNLCMVTGGHNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+I++RE+H GSF+ +HI+D++GH +ATRL VF IGKG KPW+SLPKGKG+KLSI EE
Sbjct: 174 VGVIQHRERHPGSFDIVHIKDSVGHTYATRLSYVFVIGKGNKPWISLPKGKGVKLSIAEE 233
Query: 259 ARKRQALATS 268
+R A TS
Sbjct: 234 RDRRLAAKTS 243
>gi|299745325|ref|XP_001831641.2| 40S ribosomal protein S4 [Coprinopsis cinerea okayama7#130]
gi|298406535|gb|EAU90174.2| 40s ribosomal protein s4 [Coprinopsis cinerea okayama7#130]
Length = 263
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/268 (63%), Positives = 207/268 (77%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKLGG +A +PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLGGTYASRPSPGPHKLRESLPLTVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +I+ QR + +D KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTSIVKQRLIKIDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ V G +G+P++ T+DGRTIRYPDPLIK NDT+K DLE NKIT+F+
Sbjct: 120 ------TYKLLKVKRVALGARGVPHVVTHDGRTIRYPDPLIKVNDTVKFDLEQNKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+V+VTGGRN GR G I ++EKH G F+ +HI+D+L FATR+ NVF IG+GTK
Sbjct: 174 KFDTGNLVIVTGGRNMGRAGTIVHKEKHVGGFDIVHIKDSLDRTFATRVSNVFVIGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
W+SLPKGKG+KL+I EE R+++A A
Sbjct: 234 AWISLPKGKGLKLTIAEERDVRRKRAAA 261
>gi|208657539|gb|ACI30066.1| ribosomal protein S4 [Anopheles darlingi]
Length = 262
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/270 (62%), Positives = 205/270 (75%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQ H+ +D +VRTD YPAGFMDV++I KT ENFRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQHHIKIDGRVRTDPNYPAGFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G K +P++ T+DGRTIRYPDP I ND+I+ D+ T K+ E +
Sbjct: 121 -------YKLLKVKRVQIGPKKVPFLLTHDGRTIRYPDPAIHQNDSIQYDIATGKVMEVL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GR G + REKH GSFE +H++DA GH FATRL NVF IGKGTK
Sbjct: 174 KFEPGNLCMITGGRNLGRCGTVMQREKHPGSFEIVHVKDATGHTFATRLSNVFIIGKGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
++SLPKGKG+KLSI EE +R LA AA
Sbjct: 234 AFISLPKGKGVKLSISEERDRR--LANKAA 261
>gi|453079891|gb|EMF07943.1| 40S ribosomal protein S4 [Mycosphaerella populorum SO2202]
Length = 261
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/268 (62%), Positives = 208/268 (77%), Gaps = 8/268 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAG+MDV++I KT ENFRL+YDTKGRF +H I +EEA
Sbjct: 61 TKAIVMQRLIKVDGKVRTDPTYPAGYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K++LET KI +FI
Sbjct: 120 ------QYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVNLETGKIDDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ K
Sbjct: 174 RFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATS 268
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAYAQA 260
>gi|426243307|ref|XP_004015500.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
Length = 251
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/270 (63%), Positives = 204/270 (75%), Gaps = 19/270 (7%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NR++H GSF+ +H++DA G+ F G K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRKRHPGSFDVVHVKDANGNSF------------GNK 221
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 222 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 251
>gi|340372095|ref|XP_003384580.1| PREDICTED: 40S ribosomal protein S4-like [Amphimedon queenslandica]
Length = 262
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 203/262 (77%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR NAPKHWMLDK G +AP+PS GPHK REC+PL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRPNAPKHWMLDKFSGRYAPRPSPGPHKLRECIPLMVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR + VD KVRTD T+PAG MDVV+I KT+E FRLLYD KGRF +H I EEAK
Sbjct: 61 VKKIVKQRLIKVDGKVRTDTTFPAGLMDVVTIEKTSEQFRLLYDVKGRFCVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ Q G KGIPY+ T+DGRTIRYPDPLIK NDT+++D+ T KIT+F+
Sbjct: 121 -------YKLGKVKRAQLGPKGIPYLVTHDGRTIRYPDPLIKVNDTVRIDIATGKITDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGN+VMV GGRN GRVG+I NRE+H GSF+ IHI+DA G+ FATR NVF IGK K
Sbjct: 174 KFDVGNLVMVVGGRNLGRVGVITNRERHHGSFDIIHIKDAKGNTFATRQTNVFVIGKNNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
+SLPK KGI+L+I EE +R
Sbjct: 234 ALISLPKAKGIRLTIAEERDRR 255
>gi|389739254|gb|EIM80448.1| 40S ribosomal protein S4 [Stereum hirsutum FP-91666 SS1]
Length = 263
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/268 (62%), Positives = 202/268 (75%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MGRGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +I+ QR + VD KVRTD TYP GFMDV++I K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTSIVQQRLIKVDGKVRTDNTYPTGFMDVLTIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ V G K +PYI T+DGRTIRYPDPLIK NDT+K D NKIT++
Sbjct: 120 ------EYKLLKVKKVAIGAKAVPYIVTHDGRTIRYPDPLIKVNDTVKFDFTQNKITDYA 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+VM+TGGRN GR G+I +REKH G F+ +H++DAL FATR+ N+F IG+GTK
Sbjct: 174 KFDTGNIVMITGGRNMGRSGVIVHREKHIGDFDIVHVKDALDRTFATRITNIFVIGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
PW+SLPKGKG KL+I EE R++Q A
Sbjct: 234 PWISLPKGKGTKLTIAEERDVRRKQRAA 261
>gi|452837123|gb|EME39066.1| ribosomal protein S4e-like protein [Dothistroma septosporum NZE10]
Length = 262
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 167/269 (62%), Positives = 207/269 (76%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL GA+APK S GPHK R+C+PL++ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGAYAPKASPGPHKLRDCMPLVVFIRNRLKYALNTRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA
Sbjct: 61 TKAIVMQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITTEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K++LET KI +FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIRVNDTVKINLETGKIEDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ K
Sbjct: 174 RFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLSIAEERDRRRAHALAG 261
>gi|296424161|ref|XP_002841618.1| 40S ribosomal protein S4 [Tuber melanosporum Mel28]
gi|295637863|emb|CAZ85809.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/261 (62%), Positives = 203/261 (77%), Gaps = 8/261 (3%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIA 63
G KKHLKRLNAP HW+LDKL G +AP+PS GPHK R+C+PL++ +RNRLKYAL REV A
Sbjct: 86 GPKKHLKRLNAPSHWLLDKLSGKYAPRPSPGPHKLRDCMPLVVFIRNRLKYALNSREVKA 145
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
I+MQR V VD KVRTD T+PAGFMDV++I KT E FRL+YDTKGRF +H I + EA
Sbjct: 146 IVMQRLVKVDGKVRTDPTFPAGFMDVITIEKTGERFRLIYDTKGRFTIHRITETEA---- 201
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 183
+KL KV+ VQ G KGIPY+ T+D RTIRYPDP I+ NDT+K+D+ET KI +FI+FD
Sbjct: 202 ---SYKLAKVKRVQLGAKGIPYLVTHDARTIRYPDPTIRVNDTVKIDIETGKIIDFIRFD 258
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWV 243
G + M TGGRN GRVG+I +RE+H G F+ +HI+DA+ + FATRL NVF +G KPW+
Sbjct: 259 TGTIAMATGGRNMGRVGVITHRERHDGGFDIVHIKDAIDNTFATRLSNVFIVGPD-KPWI 317
Query: 244 SLPKGKGIKLSIIEEARKRQA 264
SLPKGKG+KL+I EE +R+A
Sbjct: 318 SLPKGKGVKLTIAEERDRRRA 338
>gi|440633275|gb|ELR03194.1| 40S ribosomal protein S4 [Geomyces destructans 20631-21]
Length = 261
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 165/264 (62%), Positives = 206/264 (78%), Gaps = 8/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++AP+PS GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPRPSPGPHKLRDCMPLIVFIRNRLKYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H ++ EEA
Sbjct: 61 TKAIVMQRLIKVDGKVRTDTTYPAGFMDVITIEKTGEHFRLVYDTKGRFTVHRVQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FI
Sbjct: 120 ------EYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG G K
Sbjct: 174 KFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIG-GEK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLPKGKG+KL+I EE +R+A
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRA 256
>gi|392576968|gb|EIW70098.1| hypothetical protein TREMEDRAFT_43729 [Tremella mesenterica DSM
1558]
Length = 263
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 167/255 (65%), Positives = 197/255 (77%), Gaps = 7/255 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP WMLDKLGG +AP+PS GPHK RECLPL ++LRNRLKYALT +E
Sbjct: 1 MGRGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRECLPLTVVLRNRLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V +I+MQR + VD KVRTD+TYP GFMDV++I ++ ENFRLLYD KGRF +H I EEA
Sbjct: 61 VTSIVMQRTIKVDGKVRTDETYPTGFMDVITIDRSGENFRLLYDVKGRFTVHRISPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVR Q G KG+PY+ T+DGRTIRYPDP IK NDTIK D NK+ I
Sbjct: 120 ------TFKLCKVRKHQLGPKGVPYVVTHDGRTIRYPDPAIKVNDTIKYDFVQNKVVGII 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VGNVVMVTGGRN GR G+I +RE+H G F+ +H++D L FATRL N+F IG+G+K
Sbjct: 174 KFEVGNVVMVTGGRNMGRSGVIVHRERHLGGFDIVHVRDVLDRTFATRLSNIFVIGEGSK 233
Query: 241 PWVSLPKGKGIKLSI 255
VSLPKGKG+KLSI
Sbjct: 234 VQVSLPKGKGVKLSI 248
>gi|393221758|gb|EJD07242.1| hypothetical protein FOMMEDRAFT_164273 [Fomitiporia mediterranea
MF3/22]
Length = 369
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 164/257 (63%), Positives = 198/257 (77%), Gaps = 7/257 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG +KHLKRLNAP WMLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT REV
Sbjct: 107 ARGPRKHLKRLNAPSAWMLDKLSGTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREV 166
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
AI+ QR + VD KVRTD+T+P GFMDVV+I K+ E+FRLLYD KGRF +H I EEA
Sbjct: 167 TAIVNQRIIRVDGKVRTDETFPTGFMDVVTIEKSGEHFRLLYDVKGRFAIHRITPEEA-- 224
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G+ +P+I T+DGRTIRYPDPLIK NDT+K D E NKIT+F+K
Sbjct: 225 -----SYKLCKVRKIGIGRNAVPHIVTHDGRTIRYPDPLIKVNDTVKFDFEQNKITDFVK 279
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+VMVTGGRN GR G+I +REK+ G + +H++DAL F TR+ N+F IG+G KP
Sbjct: 280 FDTGNIVMVTGGRNMGRAGVIVHREKNDGGHDMVHVRDALDRTFVTRVSNIFVIGEGIKP 339
Query: 242 WVSLPKGKGIKLSIIEE 258
W+SLPKGKG KL+I EE
Sbjct: 340 WISLPKGKGTKLTISEE 356
>gi|392495106|gb|AFM74216.1| 40S ribosomal protein S4-like protein [Spirometra erinaceieuropaei]
Length = 264
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/261 (63%), Positives = 199/261 (76%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG++KHLKRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E
Sbjct: 3 VRGIRKHLKRLNAPKHWMLDKLGGNFAPRPSTGPHKLRECLPLAIFLRNRLKYALTYDEC 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL QR V VD +VRTD+ +PAGFMDV+SI +TNE+FRL+YDTK RF +H I EEAK
Sbjct: 63 TKILKQRLVKVDGRVRTDRKFPAGFMDVISIDRTNEHFRLIYDTKKRFAIHRIHPEEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCK+R V G +PYI T+D RTIRYPDP IK NDT+++D T K+ FIK
Sbjct: 122 ------YKLCKIRKVLTGPGNVPYIVTHDARTIRYPDPEIKVNDTVQIDRATGKVLNFIK 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GNV MVTGG N GRVG+I E+H GS E +H++D GH+F TRL N+F IGK K
Sbjct: 176 FEPGNVCMVTGGHNLGRVGVITQWERHPGSVEMVHVRDNTGHQFVTRLNNIFIIGKSNKA 235
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
WVSLPKGKGI+LSI+EE +R
Sbjct: 236 WVSLPKGKGIRLSILEERDRR 256
>gi|326432455|gb|EGD78025.1| ribosomal protein s4 X isoform [Salpingoeca sp. ATCC 50818]
Length = 263
Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 167/262 (63%), Positives = 204/262 (77%), Gaps = 8/262 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+HWMLDKL G FAP+PS+GPHK RECLPL++ +RNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLNAPRHWMLDKLSGRFAPRPSTGPHKLRECLPLVIFIRNRLKYALTYHE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I +R++ VD KVRTD TYPAGFMDV+SIPKTNENFRLLYD KGR+ +H I D EAK
Sbjct: 61 VKMITKERNIKVDGKVRTDMTYPAGFMDVISIPKTNENFRLLYDAKGRYTVHRIDDAEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV G +G+P + T+D RTIRYPDP IK +D++K+DLET +ITEF+
Sbjct: 121 -------YKLCKVTKTFVGPRGVPMVVTHDARTIRYPDPHIKVHDSVKVDLETGRITEFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD + M+TGGRN GRVG I +R++H G F+ + ++DA GH+FATRL N+F IG K
Sbjct: 174 KFDNNMLAMITGGRNMGRVGTIVHRDRHLGGFDIVTLRDANGHQFATRLSNIFVIGD-KK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P VSLPKGKG+KL+I EE +R
Sbjct: 233 PLVSLPKGKGVKLTIAEERDRR 254
>gi|440894131|gb|ELR46663.1| hypothetical protein M91_05049, partial [Bos grunniens mutus]
Length = 258
Score = 349 bits (896), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 168/264 (63%), Positives = 201/264 (76%), Gaps = 7/264 (2%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KK LK + APKHWMLDKL G FAP+PS+GPHK RECLPLI LRNRLKYALT EV I
Sbjct: 2 KKPLKCVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLITFLRNRLKYALTGDEVKKIC 61
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQ + +D KVRTD TYPAGFMDV+ I KT ENFRL+ DTKGRF +H I +EAK
Sbjct: 62 MQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLICDTKGRFAVHRITPQEAK----- 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLCKVR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KI +FIKFD G
Sbjct: 117 --YKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTG 174
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
N+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FAT+L N+F GKG KPW+SL
Sbjct: 175 NLCMVTGGANLGRIGVISNRERHLGSFDVVHVKDANGNSFATQLSNIFVTGKGNKPWISL 234
Query: 246 PKGKGIKLSIIEEARKRQALATSA 269
P+GKGI+L+I EE KR A S+
Sbjct: 235 PRGKGIRLTIAEERDKRLAAKQSS 258
>gi|431914424|gb|ELK15681.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 245
Score = 349 bits (895), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 198/252 (78%), Gaps = 7/252 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR +
Sbjct: 61 DVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITTEEAK-------YKLCKVRKIFV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR
Sbjct: 114 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 174 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 233
Query: 259 ARKRQALATSAA 270
KR A S+
Sbjct: 234 RDKRLAAKQSSG 245
>gi|167526949|ref|XP_001747807.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773556|gb|EDQ87194.1| predicted protein [Monosiga brevicollis MX1]
Length = 264
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/271 (59%), Positives = 205/271 (75%), Gaps = 7/271 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APKHWMLDKL G +AP+PS+GPHK RECLPL++ LRNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLAAPKHWMLDKLTGRYAPRPSTGPHKLRECLPLVIFLRNRLKYALTYHE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL QR V VD K RTD T+P G MDV+SIP TNE+FRLL+DTKGR+ +H I+D+EA
Sbjct: 61 VKMILKQRKVYVDGKARTDLTFPTGLMDVISIPDTNEHFRLLFDTKGRYTVHKIQDDEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV+ G +PY+ T+DGRTIRYPDP IK NDT+K+DL++ +IT+FI
Sbjct: 120 ------SFKLCKVKQAAIGPNAVPYVVTHDGRTIRYPDPHIKVNDTVKVDLDSGRITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+G +V+ TGGRN GRVG + +R+K G+ + +H++D+ G +F T L NVF +G G K
Sbjct: 174 KFDIGVLVLCTGGRNMGRVGTLMSRDKMMGATDVVHVRDSAGQQFTTLLSNVFAVGSGKK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
P +SLP+GKG++L+I EE +R AAA
Sbjct: 234 PAISLPRGKGVRLTIAEERDRRLKDKAKAAA 264
>gi|402910524|ref|XP_003917924.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Papio anubis]
gi|12846200|dbj|BAB27070.1| unnamed protein product [Mus musculus]
Length = 245
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 198/252 (78%), Gaps = 7/252 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR +
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK-------YKLCKVRKIFV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR
Sbjct: 114 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 174 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 233
Query: 259 ARKRQALATSAA 270
KR A S+
Sbjct: 234 RDKRLAAKQSSG 245
>gi|255944153|ref|XP_002562844.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587579|emb|CAP85619.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 260
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/262 (63%), Positives = 205/262 (78%), Gaps = 8/262 (3%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL REV
Sbjct: 2 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVK 61
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
AI+MQR V VD KVRTD TYPAGFMDV+S+ KT E+FRL+YDTKGRF +H I+ EEA
Sbjct: 62 AIMMQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLIYDTKGRFTVHRIQAEEA--- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KI +F+KF
Sbjct: 119 ----EYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKF 174
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
D G V+M TGGRN GRVG+I +RE+H G F +H++DAL ++FATR NVF IG+ KPW
Sbjct: 175 DSGVVIMATGGRNMGRVGVITHRERHDGGFNIVHVRDALDNQFATRESNVFVIGQ-DKPW 233
Query: 243 VSLPKGKGIKLSIIEEARKRQA 264
VSLPKGKG+KLSI EE +R+A
Sbjct: 234 VSLPKGKGVKLSIAEERDRRRA 255
>gi|307178149|gb|EFN66957.1| 40S ribosomal protein S4 [Camponotus floridanus]
Length = 261
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 170/263 (64%), Positives = 202/263 (76%), Gaps = 7/263 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+MQR + VD K+R D YPAGFMDV++I KT E FRL+YD KGRF H I EEAK
Sbjct: 61 TKIVMQRLIKVDGKIRIDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ + KI + I+
Sbjct: 120 ------YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIASGKILDSIR 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
FD GN+ M+TGGRN GRVG + +RE+H GSF+ HI+D GH FATRL NVF IGKGTK
Sbjct: 174 FDSGNLCMITGGRNLGRVGTVVSRERHPGSFDICHIKDTQGHTFATRLNNVFIIGKGTKA 233
Query: 242 WVSLPKGKGIKLSIIEEARKRQA 264
+VSLP+ +G+KLSI EE KR A
Sbjct: 234 YVSLPRDRGVKLSIAEERDKRLA 256
>gi|145286314|gb|ABP52061.1| ribosomal protein s4a [Ancylostoma caninum]
Length = 261
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/264 (63%), Positives = 199/264 (75%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL PKHWMLDKLGG FA +P SGPHK RECLPL L LRNRLKYAL Y E
Sbjct: 1 MARGPKKHLKRLATPKHWMLDKLGGVFAVRPRSGPHKLRECLPLNLFLRNRLKYALNYAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL QR + VD K+RTD +PAGFMDV+SI +TNE FRLLYD KGR+ +H I E
Sbjct: 61 VKKILRQRVIKVDGKIRTDHKFPAGFMDVISIERTNETFRLLYDVKGRYTVHRITAAEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
QFKLCKV+++ ++ IPYI T DGRTIRYPDP IK NDT+ +DL +NKIT+++
Sbjct: 120 ------QFKLCKVKALHVAKQNIPYITTNDGRTIRYPDPHIKVNDTVVIDLSSNKITDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GRVG+I +REK G+F+ IH++DA GH FATR+ NVF IGKG K
Sbjct: 174 KFEAGNLAMITGGRNVGRVGVIGHREKLPGAFDIIHVKDAAGHSFATRVSNVFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
VSLP KGI+L+I EE KR A
Sbjct: 234 ALVSLPAAKGIRLTIAEERDKRLA 257
>gi|425780989|gb|EKV18971.1| 40S ribosomal protein S4, putative [Penicillium digitatum PHI26]
gi|425783252|gb|EKV21109.1| 40S ribosomal protein S4, putative [Penicillium digitatum Pd1]
Length = 260
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/262 (63%), Positives = 205/262 (78%), Gaps = 8/262 (3%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL REV
Sbjct: 2 RGPGKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVK 61
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
AI+MQR V VD KVRTD TYPAGFMDV+S+ KT E+FRL+YDTKGRF +H I+ EEA
Sbjct: 62 AIMMQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEA--- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KI +F+KF
Sbjct: 119 ----EYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKF 174
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
D G V+M TGGRN GRVG+I +RE+H G F +H++DAL ++FATR NVF IG+ KPW
Sbjct: 175 DSGVVIMATGGRNMGRVGVITHRERHDGGFNIVHVRDALDNQFATRESNVFVIGQ-DKPW 233
Query: 243 VSLPKGKGIKLSIIEEARKRQA 264
VSLPKGKG+KLSI EE +R+A
Sbjct: 234 VSLPKGKGVKLSIAEERDRRRA 255
>gi|334184265|ref|NP_001189539.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
gi|330251523|gb|AEC06617.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
Length = 184
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/188 (88%), Positives = 174/188 (92%), Gaps = 7/188 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFI
Sbjct: 121 -------FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFI 173
Query: 181 KFDVGNVV 188
KFDVG V
Sbjct: 174 KFDVGKCV 181
>gi|353240563|emb|CCA72427.1| probable ribosomal protein S4.e, cytosolic [Piriformospora indica
DSM 11827]
Length = 262
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/263 (63%), Positives = 199/263 (75%), Gaps = 7/263 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP WMLDKLGG +AP+PS GPHK RE LPL + LR RL+YALT RE
Sbjct: 1 MARGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRESLPLTIFLRRRLQYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL QR V VD KVRTD YP GF DV++I K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTTILAQRLVKVDGKVRTDIKYPVGFQDVITIEKSGEHFRLLYDVKGRFAIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ V G +G+PYI T+DGRTIRYPDP IK NDT+K DLE KIT F+
Sbjct: 120 ------TYKLCKVKKVLIGNRGVPYIVTHDGRTIRYPDPDIKTNDTVKYDLEQGKITGFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GNVV+VTGGRN GRVG I +RE+H G F+ +H++D L FATR+ N+F IG+GTK
Sbjct: 174 KFDTGNVVVVTGGRNMGRVGTITHRERHIGGFDIVHVKDVLDRTFATRVTNIFVIGEGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PW+SLPKGKG+KL+I EE +R+
Sbjct: 234 PWISLPKGKGVKLTISEERDQRR 256
>gi|354683887|gb|AER35072.1| 40S ribosomal protein S4 [Dictyostelium lacteum]
Length = 267
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/273 (63%), Positives = 205/273 (75%), Gaps = 12/273 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
+ARG KKHLKRL AP HWMLDKL G+FAP+PSSGPHK RECLPLILILRNRLKYALT +E
Sbjct: 1 IARGPKKHLKRLAAPSHWMLDKLSGSFAPRPSSGPHKIRECLPLILILRNRLKYALTKKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQRH+ VD KVRTD +PAGFMDVV I +T E+FRLLYD KGRF L I EEAK
Sbjct: 61 VTLILMQRHLRVDGKVRTDPNFPAGFMDVVQIKETKEDFRLLYDPKGRFTLQRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL +V V+ G +GIPY++T DGRTIRYPDP IK +DT+K+D+ + KIT FI
Sbjct: 121 -------FKLARVTKVETGNQGIPYVHTDDGRTIRYPDPSIKIHDTVKIDIASGKITSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
F+V N+ M+ GG N GRVG+I +REKH GSF+ +HI D++GH+FATRL NVF IGK
Sbjct: 174 PFEVNNLCMIVGGHNLGRVGVITSREKHPGSFDIVHITDSVGHQFATRLSNVFVIGKANH 233
Query: 241 PWVSLPKGKGIKLSIIEE-----ARKRQALATS 268
VSLP GKG++ S I+E RK + + TS
Sbjct: 234 TLVSLPAGKGVRRSRIDERNTLLKRKGEKVETS 266
>gi|1350992|sp|P47837.1|RS4_CANAL RecName: Full=40S ribosomal protein S4; AltName: Full=S7
gi|1051260|gb|AAC49871.1| ribosomal protein S7 [Candida albicans]
Length = 262
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 171/265 (64%), Positives = 202/265 (76%), Gaps = 8/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP HWML KL G +AP+PS+GPH RE LPL + LRNRL YAL RE
Sbjct: 1 MGRGPKKHLKRLAAPSHWMLXKLSGTYAPRPSAGPHXLRESLPLXVFLRNRLXYALCGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQ+HV V KVRTD TYPAGFMDV+++ TNE+FRL YD KG+F +H I EEA
Sbjct: 61 VKAIMMQQHVQVVGKVRTDTTYPAGFMDVITLEATNEHFRLAYDVKGKFAVHRISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI FI
Sbjct: 120 ------VYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGT 239
KFD G +VMVTGGRN GRVG+I +REK +G F+ +HI+DAL + F TRL NVF IG +
Sbjct: 174 KFDTGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAG 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KPWVSLPKGKGIKLSI EE +R A
Sbjct: 234 KPWVSLPKGKGIKLSISEERDRRXA 258
>gi|28630198|gb|AAN77887.1| ribosomal protein S4 [Scyliorhinus canicula]
Length = 238
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 162/245 (66%), Positives = 197/245 (80%), Gaps = 7/245 (2%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV 70
RL AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR +
Sbjct: 1 RLAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 60
Query: 71 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKL 130
+D KVRTD TYP G MDV+SI KT+E+FRL+YDTKGRF +H I EEAK +KL
Sbjct: 61 KIDGKVRTDITYPTGSMDVISIDKTSEHFRLIYDTKGRFAVHRITVEEAK-------YKL 113
Query: 131 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 190
CKVR ++ G KGIP++ T+D RTIRYPDPLIK NDT+++DL+T KIT+FIKFD GN+ MV
Sbjct: 114 CKVRKIRVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLDTGKITDFIKFDTGNLCMV 173
Query: 191 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 250
GG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKG
Sbjct: 174 IGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKG 233
Query: 251 IKLSI 255
I+L+I
Sbjct: 234 IRLTI 238
>gi|148695326|gb|EDL27273.1| mCG127176 [Mus musculus]
Length = 245
Score = 346 bits (888), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 166/252 (65%), Positives = 197/252 (78%), Gaps = 7/252 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK REC PLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECPPLIIFLRNRLKYALTGDEVKKICMQRFIKIDVKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA Q+KLCKVR +
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEA-------QYKLCKVRKIFV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR
Sbjct: 114 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 174 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 233
Query: 259 ARKRQALATSAA 270
KR A S+
Sbjct: 234 RDKRLAAKQSSG 245
>gi|44967243|gb|AAS49567.1| ribosomal protein S4 [Latimeria chalumnae]
Length = 238
Score = 346 bits (888), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 164/245 (66%), Positives = 194/245 (79%), Gaps = 7/245 (2%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV 70
R+ AP+HWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR +
Sbjct: 1 RVAAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 60
Query: 71 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKL 130
+D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EE K +KL
Sbjct: 61 KIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEETK-------YKL 113
Query: 131 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 190
CKVR V G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT+FIKFD GN MV
Sbjct: 114 CKVRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLNTGKITDFIKFDTGNQCMV 173
Query: 191 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 250
GG N GRVG+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKG
Sbjct: 174 IGGANLGRVGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKG 233
Query: 251 IKLSI 255
I+L+I
Sbjct: 234 IRLTI 238
>gi|401888387|gb|EJT52345.1| hypothetical protein A1Q1_04556 [Trichosporon asahii var. asahii
CBS 2479]
gi|406696387|gb|EKC99677.1| hypothetical protein A1Q2_05987 [Trichosporon asahii var. asahii
CBS 8904]
Length = 262
Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 165/258 (63%), Positives = 198/258 (76%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP WMLDKLGG +AP+PS GPHK RE LPL + LRNR+KYALT +E
Sbjct: 1 MGRGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRESLPLTVFLRNRMKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+ QR + VD KVRTD+T+PAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTAIVKQRLIQVDGKVRTDETFPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV+ Q G KG+PY+ T+DGRTIRYPDP IK NDTIK D + NKIT +
Sbjct: 120 ------TFKLCKVKKCQLGAKGVPYVVTHDGRTIRYPDPNIKVNDTIKFDFQQNKITGHL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GNVVM+TGGRN GR G+I ++E+H G F+ +H++D L FATR+GNVF IG+G K
Sbjct: 174 KFEPGNVVMITGGRNMGRSGVIVHKERHLGGFDIVHVRDVLDRTFATRIGNVFVIGEGAK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
VSLPKGKG+KL+I EE
Sbjct: 234 AQVSLPKGKGVKLTITEE 251
>gi|66823117|ref|XP_644913.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
gi|6226700|sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4
gi|3647233|gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum]
gi|60473102|gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
Length = 267
Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 167/258 (64%), Positives = 198/258 (76%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PSSGPHK RECLPLIL+LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPNHWMLDKLSGKWAPRPSSGPHKLRECLPLILVLRNRLKYALTKKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR V VD KVRTD YPAGFMDV+SI KT ENFRLL+D KGRF L I EEAK
Sbjct: 61 VTLILMQRLVKVDGKVRTDPNYPAGFMDVISIEKTKENFRLLFDPKGRFTLQRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL +V V+ G +GIPY++T DGRTIRYPDP I +DTIK+D+E+ KIT FI
Sbjct: 121 -------FKLARVTRVETGNQGIPYVHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
F+V N+ M+ GG N GRVG + +REKH GSF+ +H+ D GH+FATRL NVF IGK ++
Sbjct: 174 PFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQ 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
+VSLP GKG++ S ++E
Sbjct: 234 TFVSLPAGKGVRRSRVDE 251
>gi|392877236|gb|AFM87450.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 245
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/252 (65%), Positives = 197/252 (78%), Gaps = 7/252 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK +KLCKVR +
Sbjct: 61 DITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAK-------YKLCKVRKILV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTGG N GR
Sbjct: 114 GTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
+G+I NRE+H GSF+ +H++D G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE
Sbjct: 174 IGVITNRERHPGSFDVVHVKDTNGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEE 233
Query: 259 ARKRQALATSAA 270
KR A S+
Sbjct: 234 RDKRLAAKQSSG 245
>gi|395754117|ref|XP_003780546.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, X isoform
[Pongo abelii]
Length = 319
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 205/271 (75%), Gaps = 9/271 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G AP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 57 MARGPKKHLKRVAAPKHWMLDKLTGC-APRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 115
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDT-KGRFRLHSIRDEEA 119
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENF T + F +H I EEA
Sbjct: 116 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFPSGSMTPRVAFAVHRITPEEA 175
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
K +KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+F
Sbjct: 176 K-------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDF 228
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
IKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG
Sbjct: 229 IKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGN 288
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
K W+SLP+GKGI+L+I EE KR A S+
Sbjct: 289 KSWISLPRGKGIRLTIAEERDKRLAAKQSSG 319
>gi|440897387|gb|ELR49092.1| hypothetical protein M91_06956 [Bos grunniens mutus]
Length = 263
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/264 (62%), Positives = 202/264 (76%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK + APKHWML+KL G FAP+PS+ PHK RE LPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKCVAAPKHWMLEKLTGVFAPRPSTSPHKLREYLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFINIDGKVSTDITYPAGFMDVISIDKTRENFCLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + G KGIP++ T+D TI YP PLIK NDTI++DLET +IT+FI
Sbjct: 121 -------YKLCKVKKIFVGTKGIPHLVTHDAHTIHYPHPLIKVNDTIQIDLETGRITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I N+E+H GS + +H++D G+ FAT+L N+F IGKG K
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNQERHSGSSDVVHVKDVNGNSFATQLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKGI+L+I EE KR A
Sbjct: 234 PWISLPRGKGIRLTIAEERDKRLA 257
>gi|432920855|ref|XP_004080004.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Oryzias
latipes]
Length = 245
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/246 (66%), Positives = 195/246 (79%), Gaps = 7/246 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK +KLCKVR +
Sbjct: 61 DVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAK-------YKLCKVRKIII 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTGG N GR
Sbjct: 114 GTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNLCMVTGGANLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE
Sbjct: 174 IGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEE 233
Query: 259 ARKRQA 264
KR A
Sbjct: 234 RDKRLA 239
>gi|48376549|gb|AAH07308.2| RPS4X protein, partial [Homo sapiens]
Length = 243
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/250 (66%), Positives = 196/250 (78%), Gaps = 7/250 (2%)
Query: 21 DKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDK 80
DKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 81 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQ 140
TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR + G
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK-------YKLCKVRKIFVGT 113
Query: 141 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 200
KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G
Sbjct: 114 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 173
Query: 201 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAR 260
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 174 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 233
Query: 261 KRQALATSAA 270
KR A S+
Sbjct: 234 KRLAAKQSSG 243
>gi|44967294|gb|AAS49568.1| ribosomal protein S4 [Protopterus dolloi]
Length = 238
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/245 (65%), Positives = 196/245 (80%), Gaps = 7/245 (2%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV 70
R+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR +
Sbjct: 1 RVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI 60
Query: 71 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKL 130
+D KVRTD TYP+GFMDV+SI KT E+FRL+YDTKGRF +H I EEAK +KL
Sbjct: 61 KIDGKVRTDITYPSGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK-------YKL 113
Query: 131 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 190
CKVR + KGIP++ T+D RTIRYPDPLIK NDT++++LE+ KIT+ IKFD GN+ MV
Sbjct: 114 CKVRKIFVRNKGIPHLVTHDARTIRYPDPLIKVNDTVQINLESGKITDMIKFDTGNLCMV 173
Query: 191 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 250
TGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKG
Sbjct: 174 TGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKG 233
Query: 251 IKLSI 255
I+L+I
Sbjct: 234 IRLTI 238
>gi|449301876|gb|EMC97885.1| hypothetical protein BAUCODRAFT_155152 [Baudoinia compniacensis
UAMH 10762]
Length = 263
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 162/267 (60%), Positives = 203/267 (76%), Gaps = 8/267 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG+ KH KRL+AP HW+LDKL G +APK S+GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 4 RGIIKHQKRLSAPSHWLLDKLSGTYAPKASAGPHKLRDCMPLIVFIRNRLKYALNTRETK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
AI+MQR + VD KVRTD YPAG+MDV++I KT ENFRL+YDTKGRF +H I +EE
Sbjct: 64 AIVMQRLIQVDGKVRTDPNYPAGYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEG--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
+KL KV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+F+ F
Sbjct: 121 ----GYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFVHF 176
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
D G + M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW
Sbjct: 177 DTGVIAMATGGRNMGRVGVITHRERHDGGFNVVHIKDAIDNEFATRESNVFVIGR-EKPW 235
Query: 243 VSLPKGKGIKLSIIEEARKRQALATSA 269
+SLPKGKG+KLSI EE +R+A A +
Sbjct: 236 ISLPKGKGVKLSIAEERDRRRAYALAG 262
>gi|444516549|gb|ELV11206.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 258
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 168/263 (63%), Positives = 202/263 (76%), Gaps = 8/263 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKHLKR+ APKHWML KL G FAP+PS+GPHK RECL LI+ LRNRLKYALT E
Sbjct: 1 MAPGPKKHLKRVAAPKHWMLGKLTGVFAPRPSTGPHKLRECLSLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK
Sbjct: 61 VKKICMQWFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRVTPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G++ IP++ +D TIRYPDPLIK NDTI++ L+T KIT+FI
Sbjct: 121 -------YKLCKVRKISVGKE-IPHLVPHDVLTIRYPDPLIKVNDTIQIYLKTGKITDFI 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 173 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHMKDANGNSFATRLSNIFVIGKGNK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQ 263
PW+SLP GKGI+L+I EE Q
Sbjct: 233 PWISLPWGKGIRLTIAEERDTEQ 255
>gi|337930|gb|AAA36597.1| scar protein [Homo sapiens]
Length = 244
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 167/252 (66%), Positives = 197/252 (78%), Gaps = 8/252 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR +
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK-------YKLCKVRKIFV 112
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR
Sbjct: 113 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 172
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 173 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 232
Query: 259 ARKRQALATSAA 270
KR A S+
Sbjct: 233 RDKRLAAKQSSG 244
>gi|398388631|ref|XP_003847777.1| 40S ribosomal protein S4 [Zymoseptoria tritici IPO323]
gi|339467650|gb|EGP82753.1| hypothetical protein MYCGRDRAFT_106489 [Zymoseptoria tritici
IPO323]
Length = 262
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 164/269 (60%), Positives = 203/269 (75%), Gaps = 8/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL+AP HW+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLSAPSHWLLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNSRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
AI+MQR + VD KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I EEA
Sbjct: 61 TKAIVMQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLVYDTKGRFTVHRITGEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KL KV VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+++ T KI +FI
Sbjct: 120 ------EYKLGKVNRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKINIATGKIEDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
FD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ K
Sbjct: 174 HFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EK 232
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
PW+SLPKGKG+KL+I EE +R+A A +
Sbjct: 233 PWISLPKGKGVKLTIAEERDRRRAQALAG 261
>gi|395514460|ref|XP_003761435.1| PREDICTED: 40S ribosomal protein S4-like [Sarcophilus harrisii]
Length = 263
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 165/270 (61%), Positives = 200/270 (74%), Gaps = 7/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KK LK + APKHWMLDKL G FAP+PS+G HK +ECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKLLKCVAAPKHWMLDKLTGVFAPRPSTGSHKLKECLPLIIFLRNRLKYALTEDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + +D K+ TD TYPAGFMDV+SI K E+F L+YDTKG F +H I E AK
Sbjct: 61 VKKICMQHFIKIDGKIHTDITYPAGFMDVISIEKMGEHFHLVYDTKGCFAVHHITVEAAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCK R + G KGIP++ T+D R IRYPDPLIK NDT+++DLE KIT+FI
Sbjct: 121 -------YKLCKARKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTVQIDLEDGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD N+ MVTGG N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG K
Sbjct: 174 KFDTSNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+S P+GKGI+L+I EE KR A S+
Sbjct: 234 PWISPPRGKGIRLTIAEERDKRLAAKQSSG 263
>gi|221482770|gb|EEE21101.1| 40S ribosomal protein S4, putative [Toxoplasma gondii GT1]
gi|221503435|gb|EEE29133.1| 40S ribosomal protein S4, putative [Toxoplasma gondii VEG]
Length = 312
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 165/265 (62%), Positives = 206/265 (77%), Gaps = 10/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG +KHLKR+ AP HWMLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYRE
Sbjct: 50 MARGPRKHLKRIAAPHHWMLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYRE 109
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H IR+EEA
Sbjct: 110 VMMIVMQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEA- 168
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL T KI + +
Sbjct: 169 ------SYKLCRVKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTL 222
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ MVTGG N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K
Sbjct: 223 KFEAGNMAMVTGGHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEK 282
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
W+SLPK KGI+LSI+E RQ L
Sbjct: 283 AWISLPKEKGIRLSIMEN---RQVL 304
>gi|28630195|gb|AAN77886.1| ribosomal protein S4 [Myxine glutinosa]
Length = 238
Score = 342 bits (878), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 159/245 (64%), Positives = 195/245 (79%), Gaps = 7/245 (2%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV 70
RL APKHWMLDKL G FAP+PS+GPH+ RECL LI+ LRNRL+YALTY EV I MQR +
Sbjct: 1 RLAAPKHWMLDKLTGVFAPRPSTGPHRLRECLSLIIFLRNRLRYALTYDEVKKICMQRLI 60
Query: 71 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKL 130
+D KVRTD TYPAGFMDV++I KT+ENFRL+YDTKGRF +H I EEAK +KL
Sbjct: 61 KIDGKVRTDITYPAGFMDVITIDKTSENFRLIYDTKGRFAIHRITAEEAK-------YKL 113
Query: 131 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 190
CK+R + KGIP++ T+D RTIRYPDPLIK NDT++++LE KIT+FIKF+ GN+ MV
Sbjct: 114 CKIRKRRVASKGIPFVVTHDARTIRYPDPLIKENDTVQVNLENGKITDFIKFETGNLCMV 173
Query: 191 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 250
TGG N GRVGII +RE+H GSF+ +H++D G+ FATRLGN+F IGK K WVSLP+GKG
Sbjct: 174 TGGANLGRVGIITSRERHPGSFDVVHVKDTAGNTFATRLGNIFVIGKAQKAWVSLPRGKG 233
Query: 251 IKLSI 255
I+L+I
Sbjct: 234 IRLTI 238
>gi|330789883|ref|XP_003283028.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
gi|325087100|gb|EGC40481.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
Length = 267
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/258 (64%), Positives = 198/258 (76%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+P+SGPHK RE LPLIL LRNRLKYALT +E
Sbjct: 1 MARGPKKHLKRLAAPNHWMLDKLSGKWAPRPTSGPHKLRESLPLILCLRNRLKYALTKKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR V VD KVRTD YPAGFMDV++I KT ENFRLLYD KGRF L I EEAK
Sbjct: 61 VTLILMQRLVKVDGKVRTDPNYPAGFMDVITIDKTKENFRLLYDPKGRFTLQRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL +V V+ G +GIPY++T DGRTIRYPDP IK +DT+K+D+E+ KIT FI
Sbjct: 121 -------FKLARVVKVESGNQGIPYVHTDDGRTIRYPDPAIKIHDTVKIDIESGKITAFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
FD+ N+ M+ GG N GRVG I NRE+H GSF+ +HI D+ G++FATRL NVF IGK ++
Sbjct: 174 PFDINNLCMIVGGHNLGRVGAINNRERHAGSFDIVHITDSAGNQFATRLSNVFVIGKSSQ 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
+VSLP GKG++ S I+E
Sbjct: 234 TFVSLPAGKGVRRSRIDE 251
>gi|95007264|emb|CAJ20484.1| 40s ribosomal protein s4, putative [Toxoplasma gondii RH]
Length = 263
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/265 (62%), Positives = 205/265 (77%), Gaps = 10/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG +KHLKR+ AP HWMLDKL G +AP+PS GPHK RE PL+++LRNRL+YALTYRE
Sbjct: 1 MARGPRKHLKRIAAPHHWMLDKLTGHYAPRPSPGPHKLRESAPLVVLLRNRLRYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H IR+EEA
Sbjct: 61 VMMIVMQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL T KI + +
Sbjct: 120 ------SYKLCRVKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ MVTGG N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K
Sbjct: 174 KFEAGNMAMVTGGHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQAL 265
W+SLPK KGI+LSI+E RQ L
Sbjct: 234 AWISLPKEKGIRLSIMEN---RQVL 255
>gi|238505502|ref|XP_002383974.1| 40S ribosomal protein S4 [Aspergillus flavus NRRL3357]
gi|317151420|ref|XP_001824650.2| 40S ribosomal protein S4 [Aspergillus oryzae RIB40]
gi|220690088|gb|EED46438.1| 40S ribosomal protein S4, putative [Aspergillus flavus NRRL3357]
gi|391863079|gb|EIT72393.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 261
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 160/255 (62%), Positives = 199/255 (78%), Gaps = 8/255 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPTKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQR + VD KVRTD T+PAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 VKAIMMQRLIQVDGKVRTDPTFPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLCKV+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F
Sbjct: 120 ------EYKLCKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDVATGKITDFA 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G V+MVTGGRN GRVG++ +RE+H G F +H++DA+ + FATR NVF IG+ K
Sbjct: 174 RFDTGVVIMVTGGRNMGRVGVVTHRERHDGGFNIVHVKDAVDNTFATRESNVFVIGQ-DK 232
Query: 241 PWVSLPKGKGIKLSI 255
PW+SLPKGKG+KLSI
Sbjct: 233 PWISLPKGKGVKLSI 247
>gi|358340045|dbj|GAA33707.2| small subunit ribosomal protein S4e [Clonorchis sinensis]
Length = 285
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/268 (62%), Positives = 196/268 (73%), Gaps = 19/268 (7%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG+KKHLKRLNAPKHWMLDKLGG FAPKPS+GPHK RECLPL + LRNRLK AL Y E
Sbjct: 12 VRGIKKHLKRLNAPKHWMLDKLGGNFAPKPSTGPHKLRECLPLSIFLRNRLKVALNYNEC 71
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL Q+ + VD KVRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF +H I EEAK
Sbjct: 72 TKILAQKLIKVDGKVRTDKKYPAGFMDVITIEKTNEHFRLVYDTKGRFAIHRIHPEEAK- 130
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR V G+PY+ T+D RTIRYPDP IK NDTI++D+ T K+ IK
Sbjct: 131 ------YKLCKVRKVLTASGGVPYLVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIK 184
Query: 182 F------------DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL 229
F D GN+ M+TGGRN GRVG I E+H GS E +H++D+ GH+F TRL
Sbjct: 185 FDPGLFLFIIFYYDQGNICMITGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFLTRL 244
Query: 230 GNVFTIGKGTKPWVSLPKGKGIKLSIIE 257
NVF IGK K W+SLPKGKG++LSIIE
Sbjct: 245 NNVFIIGKSNKAWISLPKGKGVRLSIIE 272
>gi|119592222|gb|EAW71816.1| ribosomal protein S4, X-linked, isoform CRA_b [Homo sapiens]
Length = 231
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/237 (68%), Positives = 190/237 (80%), Gaps = 7/237 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
KFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGK
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>gi|158286707|ref|XP_308886.4| AGAP006871-PA [Anopheles gambiae str. PEST]
gi|157020596|gb|EAA04244.5| AGAP006871-PA [Anopheles gambiae str. PEST]
Length = 262
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/270 (61%), Positives = 203/270 (75%), Gaps = 9/270 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQRHV +D KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRHVKIDGKVRTDPNYPAGFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G K +P++ T+DGRTIRYPDP I +D+I+ D+ T K+ + +
Sbjct: 121 -------YKLLKVKRVQIGPKRVPFLLTHDGRTIRYPDPQIHQHDSIQYDIATGKVLDVL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ M+TGGRN GR G + REKH GSFE +H++D GH FATRL NVF IGK TK
Sbjct: 174 KFEPGNLCMITGGRNLGRCGTVILREKHPGSFEIVHVKDTTGHVFATRLSNVFIIGKSTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
++SLPKGKG+KL+I EE +R LA AA
Sbjct: 234 AYISLPKGKGVKLTIAEERDRR--LANKAA 261
>gi|237840521|ref|XP_002369558.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
gi|211967222|gb|EEB02418.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
Length = 301
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 205/264 (77%), Gaps = 10/264 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG +KHLKR+ AP HWMLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYREV
Sbjct: 40 ARGPRKHLKRIAAPHHWMLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYREV 99
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
+ I+MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H IR+EEA
Sbjct: 100 MMIVMQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEA-- 157
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLC+V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL T KI + +K
Sbjct: 158 -----SYKLCRVKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLK 212
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ GN+ MVTGG N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K
Sbjct: 213 FEAGNMAMVTGGHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKA 272
Query: 242 WVSLPKGKGIKLSIIEEARKRQAL 265
W+SLPK KGI+LSI+E RQ L
Sbjct: 273 WISLPKEKGIRLSIMEN---RQVL 293
>gi|226507767|ref|NP_001147360.1| 40S ribosomal protein S4 [Zea mays]
gi|195610502|gb|ACG27081.1| 40S ribosomal protein S4 [Zea mays]
Length = 261
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 205/267 (76%), Gaps = 8/267 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KH KRL+AP HW+LDKL G++APK S GPHK R+C+PLI+ +RNRLKYAL RE+
Sbjct: 2 RGPGKHQKRLSAPSHWLLDKLSGSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGREMK 61
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
AI+MQR + VD KVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H I EEA
Sbjct: 62 AIVMQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEHFRLVYDTKGRFTVHRITGEEA--- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
++KL KV+ VQ G+ GIP++ T+D RTIR+PDP IK NDT+K+DL T KI +FI+F
Sbjct: 119 ----EYKLGKVKRVQLGKGGIPFLVTHDARTIRFPDPAIKVNDTVKIDLTTGKIQDFIRF 174
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
D G + M TGGRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW
Sbjct: 175 DTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGQ-EKPW 233
Query: 243 VSLPKGKGIKLSIIEEARKRQALATSA 269
+SLPKGKG+KLSI EE +R+A A +
Sbjct: 234 ISLPKGKGVKLSIAEERDRRRAHALAG 260
>gi|46128673|ref|XP_388890.1| hypothetical protein FG08714.1 [Gibberella zeae PH-1]
Length = 243
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/250 (64%), Positives = 200/250 (80%), Gaps = 8/250 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +APKPS+GPHK R+C+PLI+ +RNRLKYAL YREV AILMQR V VD KVRT
Sbjct: 1 MLDKLSGTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYREVKAILMQRLVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D T+P+GFMDV++I KT ENFRL+YDTKGRF +H I++EEA ++KL KV+ VQ
Sbjct: 61 DSTFPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEA-------EYKLGKVKRVQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G VVMVTGGRN GR
Sbjct: 114 GRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KL+I EE
Sbjct: 174 VGVITHRERHDGGFNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLTIAEE 232
Query: 259 ARKRQALATS 268
+R+A A S
Sbjct: 233 RDRRRAYAIS 242
>gi|426257601|ref|XP_004022414.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
Length = 266
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/273 (60%), Positives = 202/273 (73%), Gaps = 10/273 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MAWGPKKHLKHVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFR---LLYDTKGRFRLHSIRDE 117
V I MQR + +D KV TD TYPAGFMDV+SI KT ENF+ L+YDTK F ++ I E
Sbjct: 61 VKKICMQRFIKIDGKVHTDITYPAGFMDVISIDKTGENFQNFCLIYDTKDHFAVYCITPE 120
Query: 118 EAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 177
EAK +KLCKVR + G KGIP++ T+D TI YPDPLIK NDTI++DLET KIT
Sbjct: 121 EAK-------YKLCKVRKIFVGTKGIPHLVTHDAHTIHYPDPLIKVNDTIQIDLETGKIT 173
Query: 178 EFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
+FIKF GN+ +VTGG + GR+G+I N+E+H SF+ +H++D G+ FATRL ++F IGK
Sbjct: 174 DFIKFGTGNLCIVTGGAHLGRIGVITNQERHPDSFDLVHVKDVNGNSFATRLSSIFVIGK 233
Query: 238 GTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
G KPW+SLP GKGI L+I EE KR A S+
Sbjct: 234 GNKPWISLPHGKGIHLTIAEERDKRLAAKQSSG 266
>gi|357615430|gb|EHJ69651.1| 40S ribosomal protein S4 [Danaus plexippus]
Length = 245
Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/251 (64%), Positives = 199/251 (79%), Gaps = 7/251 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VD KVRT
Sbjct: 1 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK +KLCKVR V
Sbjct: 61 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK-------YKLCKVRHVGT 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ ++KI +FIKF+ GN+ M+TGGRN GR
Sbjct: 114 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIASSKIMDFIKFESGNLCMITGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG I +RE+H GSF+ +HI+D++GH FATRL NVF IGKGTK ++SLP+GKGI+L+I EE
Sbjct: 174 VGTIVSRERHPGSFDIVHIKDSMGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEE 233
Query: 259 ARKRQALATSA 269
KR A +A
Sbjct: 234 RDKRIAAKVAA 244
>gi|324523515|gb|ADY48258.1| 40S ribosomal protein S4 [Ascaris suum]
Length = 263
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/270 (61%), Positives = 200/270 (74%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG K+HLKRL AP HWMLDKLGG FAP+P+SGPHK RE LPLIL LRNRLKYAL+Y E
Sbjct: 1 MARGPKRHLKRLAAPHHWMLDKLGGVFAPRPTSGPHKLRESLPLILFLRNRLKYALSYNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I QR + +D KVRT+ +PAGFMDV++I KTNE FRLLYD KGR+ +H I + E +
Sbjct: 61 ARMICKQRLIKIDGKVRTEMRFPAGFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGR 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV G KG+P+I T+D RTIRYPDP +K NDTI LD+ + K +++
Sbjct: 121 -------FKLCKVVKKSVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVLDIASGKFNDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGGRN GRVG++ +REKH GSF+ +H++DA GH FATRL NVF IGKGTK
Sbjct: 174 KFDQGNLCMVTGGRNMGRVGVVGHREKHPGSFDIVHVKDAAGHTFATRLNNVFIIGKGTK 233
Query: 241 PWVSLPKG-KGIKLSIIEEARKRQALATSA 269
VSLP KG++L+I EE KR A +A
Sbjct: 234 SLVSLPGATKGVRLTIAEERDKRLAQKKAA 263
>gi|312077176|ref|XP_003141188.1| 40S ribosomal protein S4 [Loa loa]
gi|307763646|gb|EFO22880.1| 40S ribosomal protein S4 [Loa loa]
Length = 263
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/270 (61%), Positives = 199/270 (73%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG K+HLKRL APKHWMLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E
Sbjct: 1 MARGPKRHLKRLAAPKHWMLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I QR + VD KVRTD +PAGFMDV+ I +TNE FRLLYD KGR+ H I ++E
Sbjct: 61 ARMICKQRLIKVDGKVRTDMRFPAGFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ T K+++++
Sbjct: 120 ------NFKLCKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIMVDIATGKMSDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGGRN GRVGI+ +REKH GSF+ +HI+DA GH FATRL NVF IGKGTK
Sbjct: 174 KFDQGNLCMVTGGRNMGRVGIVGHREKHPGSFDIVHIKDAAGHSFATRLNNVFIIGKGTK 233
Query: 241 PWVSLP-KGKGIKLSIIEEARKRQALATSA 269
VSLP KG++L+I EE +R A +A
Sbjct: 234 SMVSLPGPTKGVRLTIAEERDRRLAQKRAA 263
>gi|351700252|gb|EHB03171.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 258
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/270 (61%), Positives = 200/270 (74%), Gaps = 12/270 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDK G FAP+PS+GPHK RECLPLI+ LRNRLK ALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKSTGVFAPRPSTGPHKLRECLPLIIFLRNRLKSALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I M R + +D KVRT+ TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA
Sbjct: 61 VKKICMHRFIKIDGKVRTEITYPAGFMDVISIDKTGENFRLIYDTKGRFAIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++ L+T KIT
Sbjct: 120 ------QYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIHLDTGKIT--- 170
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+ N+ MVTGG N G +G+I N E+H GSF+ +H++D G+ FAT L N+F IGKG K
Sbjct: 171 --NTSNLCMVTGGANLGGIGVITNGERHPGSFDVVHVKDTNGNSFATWLSNIFLIGKGNK 228
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
PW+SLP+GKGI+L+I EE KR A S+
Sbjct: 229 PWISLPRGKGIRLTIAEERDKRLAAKQSSG 258
>gi|343429529|emb|CBQ73102.1| probable ribosomal protein S4.e, cytosolic [Sporisorium reilianum
SRZ2]
Length = 264
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 161/268 (60%), Positives = 199/268 (74%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG K HLKRLNAP WMLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT RE
Sbjct: 1 MVRGPKHHLKRLNAPSSWMLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI QR + +D KVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H I EEA
Sbjct: 61 VNAITAQRLIKIDGKVRTDPTYPTGFQDVVSIDKSGEHFRILYDVKGRFIVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G +G+P+I T+DGRTIRYPDP IK NDT++ D+E+ KI +F+
Sbjct: 120 ------TYKLLKVKKVQLGARGVPHIVTHDGRTIRYPDPAIKVNDTVRFDIESQKILDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
FD G VMVTGGRN+GR G+I RE+H G F+ +HI+D LG +F+TRL NVF IG K
Sbjct: 174 AFDTGATVMVTGGRNQGRAGVITGRERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGADGK 233
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
P +S+P+G G+KL+I EE R+RQ A
Sbjct: 234 PMISMPRGGGVKLTITEERDQRRRQKEA 261
>gi|344257932|gb|EGW14036.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 335
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/243 (65%), Positives = 191/243 (78%), Gaps = 7/243 (2%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYPAGFM
Sbjct: 100 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 159
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR + G KGIP++
Sbjct: 160 DVISIDKTGENFRLIYDTKGRFAVHRITSEEAK-------YKLCKVRKIFVGTKGIPHLV 212
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+
Sbjct: 213 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 272
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALAT 267
H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A
Sbjct: 273 HPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQ 332
Query: 268 SAA 270
S+
Sbjct: 333 SSG 335
>gi|255730477|ref|XP_002550163.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
gi|240132120|gb|EER31678.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
Length = 244
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 162/247 (65%), Positives = 197/247 (79%), Gaps = 8/247 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VD KVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA +KL KV+ VQ
Sbjct: 61 DSTYPAGFMDVITLEATNEHFRLIYDVKGKFAVHRISAEEA-------SYKLGKVKKVQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G+KG+PY+ T+DGRT+RYPDPLIKANDT+K+DL T KI +FIKFD G +VMVTGGRN GR
Sbjct: 114 GKKGVPYVVTHDGRTLRYPDPLIKANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGIKLSIIE 257
VG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI E
Sbjct: 174 VGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISE 233
Query: 258 EARKRQA 264
E +R+A
Sbjct: 234 ERDRRRA 240
>gi|58259587|ref|XP_567206.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107185|ref|XP_777723.1| 40S ribosomal protein S4 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321249797|ref|XP_003191577.1| hypothetical protein CGB_A6670W [Cryptococcus gattii WM276]
gi|50260419|gb|EAL23076.1| hypothetical protein CNBA6010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223343|gb|AAW41387.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458044|gb|ADV19790.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
gi|405117993|gb|AFR92768.1| 40s ribosomal protein [Cryptococcus neoformans var. grubii H99]
Length = 263
Score = 336 bits (862), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 164/255 (64%), Positives = 194/255 (76%), Gaps = 7/255 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL AP WMLDKLGG +AP+PS GPHK RE LPL + LRNRLKYALT RE
Sbjct: 1 MGRGPKKHLKRLAAPSSWMLDKLGGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+ QR + VD KVRTD+T+PAGFMDV+SI ++ E+FRLLYD KGRF +H I EEA
Sbjct: 61 VTAIVKQRLIKVDGKVRTDETFPAGFMDVISIERSGEHFRLLYDVKGRFTIHRITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL KVR Q G KG+P+I T+DGRTIRYPDP IK NDT+K D NKI + I
Sbjct: 120 ------TFKLLKVRKHQLGAKGVPHIVTHDGRTIRYPDPAIKVNDTVKFDFVQNKIVDHI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GNVVMVTGGRN GR G+I ++E+H G F+ +H++D L FATRL N+F IG+G+K
Sbjct: 174 KFEPGNVVMVTGGRNMGRSGVIVHKERHLGGFDIVHVKDVLDRTFATRLSNIFVIGEGSK 233
Query: 241 PWVSLPKGKGIKLSI 255
VSLPKGKG+KLSI
Sbjct: 234 AQVSLPKGKGVKLSI 248
>gi|28630193|gb|AAN77885.1| ribosomal protein S4 [Branchiostoma lanceolatum]
Length = 238
Score = 336 bits (862), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 159/245 (64%), Positives = 187/245 (76%), Gaps = 7/245 (2%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV 70
RL AP HWMLDKL G FAP+PS GPHK RECLPL L LRNRLKYALTY EV ILMQR +
Sbjct: 1 RLAAPNHWMLDKLSGKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDEVKRILMQRLI 60
Query: 71 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKL 130
VD KVRTD+ YP+GFMD ++I KT ENFRL+ D KGRF +H I EEAK +KL
Sbjct: 61 KVDGKVRTDRCYPSGFMDAITIEKTAENFRLICDVKGRFTVHRITPEEAK-------YKL 113
Query: 131 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 190
CKVR V G KGIP + T+D RTIRYPDP I+ ND++++D+ T KIT+ IKFD GNV MV
Sbjct: 114 CKVRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMV 173
Query: 191 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 250
TGGRN GRVG++ NRE+H GS + +H++D GH FATRL N+F IG+G KPWVSL KGKG
Sbjct: 174 TGGRNLGRVGLVTNRERHPGSLDIVHVKDTAGHTFATRLSNIFVIGRGNKPWVSLLKGKG 233
Query: 251 IKLSI 255
I L+I
Sbjct: 234 IHLTI 238
>gi|146418285|ref|XP_001485108.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
gi|146390581|gb|EDK38739.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
Length = 244
Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 162/247 (65%), Positives = 198/247 (80%), Gaps = 8/247 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQ HV VD KVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL KV+ VQ
Sbjct: 61 DSTFPAGFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEA-------SYKLGKVKKVQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G++GIPY+ T+DGRTIRYPDPLI+ANDT+K+DLE+ KI++FIKFD G +VMVTGGRN GR
Sbjct: 114 GKRGIPYVVTHDGRTIRYPDPLIRANDTVKIDLESGKISDFIKFDTGALVMVTGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGIKLSIIE 257
VG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGIKLSI E
Sbjct: 174 VGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLPKGKGIKLSISE 233
Query: 258 EARKRQA 264
E +R+A
Sbjct: 234 ERDRRRA 240
>gi|238879347|gb|EEQ42985.1| 40S ribosomal protein S4 [Candida albicans WO-1]
Length = 244
Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 162/247 (65%), Positives = 197/247 (79%), Gaps = 8/247 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VD KVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA +KL KV+ VQ
Sbjct: 61 DTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISGEEA-------AYKLGKVKKVQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +FIKFD G +VMVTGGRN GR
Sbjct: 114 GKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGIKLSIIE 257
VG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI E
Sbjct: 174 VGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISE 233
Query: 258 EARKRQA 264
E +R+A
Sbjct: 234 ERDRRRA 240
>gi|68475117|ref|XP_718444.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|68475658|ref|XP_718177.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46439933|gb|EAK99245.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46440209|gb|EAK99518.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
Length = 244
Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 162/247 (65%), Positives = 197/247 (79%), Gaps = 8/247 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AI+MQ+HV VD KVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA +KL KV+ VQ
Sbjct: 61 DTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEA-------AYKLGKVKKVQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +FIKFD G +VMVTGGRN GR
Sbjct: 114 GKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGIKLSIIE 257
VG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI E
Sbjct: 174 VGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISE 233
Query: 258 EARKRQA 264
E +R+A
Sbjct: 234 ERDRRRA 240
>gi|345324726|ref|XP_001510806.2| PREDICTED: 40S ribosomal protein S4-like, partial [Ornithorhynchus
anatinus]
Length = 279
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/236 (67%), Positives = 189/236 (80%), Gaps = 7/236 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV
Sbjct: 51 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV 110
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 111 KKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK- 169
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKVR + G KGIP++ T++ RTIRYPDPLIK NDT+++DLET KIT+FIK
Sbjct: 170 ------YKLCKVRKIFVGTKGIPHLVTHEARTIRYPDPLIKVNDTVQIDLETGKITDFIK 223
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
FD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGK
Sbjct: 224 FDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 279
>gi|417408892|gb|JAA50980.1| Putative 40s ribosomal protein s4, partial [Desmodus rotundus]
Length = 236
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/243 (65%), Positives = 191/243 (78%), Gaps = 7/243 (2%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYPAGFM
Sbjct: 1 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 60
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR + G KGIP++
Sbjct: 61 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAK-------YKLCKVRKIFVGTKGIPHLV 113
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+
Sbjct: 114 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 173
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALAT 267
H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A
Sbjct: 174 HPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQ 233
Query: 268 SAA 270
S+
Sbjct: 234 SSG 236
>gi|402223625|gb|EJU03689.1| 40S ribosomal protein S4 [Dacryopinax sp. DJM-731 SS1]
Length = 244
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/251 (63%), Positives = 195/251 (77%), Gaps = 9/251 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS GPHK RECLPL++ LRNRLKYALT REV +I+MQR + VD KVRT
Sbjct: 1 MLDKLSGTYAPRPSPGPHKLRECLPLVIFLRNRLKYALTGREVNSIVMQRLIKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+++ K+ E+FRLLYD KGRF +H I EEA +KL KV+ +
Sbjct: 61 DTTYPAGFMDVITLEKSGEHFRLLYDVKGRFTIHRITPEEA-------TYKLLKVKKLAI 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KG+PYI T+DGRTIRYPDPLIK NDT+K DLET KI +F+KFD GNV ++TGGRN GR
Sbjct: 114 GAKGVPYIVTHDGRTIRYPDPLIKVNDTVKFDLETGKIVDFVKFDTGNVAVITGGRNMGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG I +REKH G F+ +H++D L +FATR+GN+F +G+G KPWVSLPKGKG+KLSI EE
Sbjct: 174 VGTIVHREKHIGGFDIVHVKDVLDRDFATRIGNIFVVGEGVKPWVSLPKGKGVKLSIAEE 233
Query: 259 --ARKRQALAT 267
R++Q A
Sbjct: 234 RDVRRKQREAV 244
>gi|298707012|emb|CBJ29820.1| 40S ribosomal protein S4 [Ectocarpus siliculosus]
Length = 262
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/258 (61%), Positives = 199/258 (77%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH+KRLNAPKHW+L K+ G +APKPS GPH +RECLPL++I+RNRLKYALT E
Sbjct: 1 MGRGPKKHMKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I MQ+ + VD KVRTD +PAGFMDVV I K+ + FRLLY+TKGRF LH I +EE+K
Sbjct: 61 ANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLC+V V+ + IPY+ T+DGRTIRYPDPLIK NDTIK+DLET K + I
Sbjct: 121 -------FKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF++GNV M+ GRN GRVGI+++ E+H GSF+ + ++D GH FATRL N+FT+G GT+
Sbjct: 174 KFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTR 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
VSLPKGKG+KL+I+EE
Sbjct: 234 AMVSLPKGKGVKLTILEE 251
>gi|406604840|emb|CCH43715.1| 40S ribosomal protein S4 [Wickerhamomyces ciferrii]
Length = 243
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/246 (64%), Positives = 196/246 (79%), Gaps = 7/246 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS+GPHK RE LPL++ LRNRLKYAL REV AILMQRHV VD KVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D T+P+GFMDV+S+ TNENFRL+YD KGRF +H I DEEA +KL KV+ V
Sbjct: 61 DATFPSGFMDVISLEATNENFRLVYDVKGRFAVHRISDEEA-------SYKLGKVKQVAL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G++G+PY+ T+DGRTIRYPDP IK NDT+K+DLE+ KIT+FIKFD G +V VTGGRN GR
Sbjct: 114 GKRGVPYVVTHDGRTIRYPDPAIKINDTVKIDLESGKITDFIKFDTGKLVYVTGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE
Sbjct: 174 VGVITHRERHEGGFDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPKGKGIKLSISEE 233
Query: 259 ARKRQA 264
+R+A
Sbjct: 234 RDRRRA 239
>gi|449460918|ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 216
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 162/185 (87%), Positives = 171/185 (92%), Gaps = 7/185 (3%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
+DVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAK FKLCKVRSVQFGQKGIPY+
Sbjct: 39 LDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK-------FKLCKVRSVQFGQKGIPYL 91
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTGGRNRGRVG+IKNRE
Sbjct: 92 NTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNRE 151
Query: 207 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALA 266
KHKGSFETIHIQDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL+IIEEARKR A
Sbjct: 152 KHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQ 211
Query: 267 TSAAA 271
++ A
Sbjct: 212 SAVTA 216
>gi|170574388|ref|XP_001892792.1| 40S ribosomal protein S4 [Brugia malayi]
gi|158601466|gb|EDP38372.1| 40S ribosomal protein S4, putative [Brugia malayi]
Length = 263
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/270 (61%), Positives = 197/270 (72%), Gaps = 8/270 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG K+HLKRL APKHWMLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E
Sbjct: 1 MARGPKRHLKRLAAPKHWMLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I QR + VD KVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H I ++E
Sbjct: 61 ARMICKQRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
KLCK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ T K+++++
Sbjct: 120 ------NIKLCKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGGRN GRVGI+ +REKH GSF+ +HI+DA H FATRL NVF IGKGTK
Sbjct: 174 KFDQGNLCMVTGGRNMGRVGIVGHREKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTK 233
Query: 241 PWVSLP-KGKGIKLSIIEEARKRQALATSA 269
VSLP KG++L+I EE +R A +A
Sbjct: 234 SIVSLPGPTKGVRLTIAEERDRRLAQKRAA 263
>gi|358056143|dbj|GAA97883.1| hypothetical protein E5Q_04563 [Mixia osmundae IAM 14324]
Length = 283
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 164/279 (58%), Positives = 201/279 (72%), Gaps = 25/279 (8%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G +KHLKRLNAP MLDKLGG +AP+ S GPHK RE +P+ + LRNRLKYALT REV
Sbjct: 4 KGARKHLKRLNAPSALMLDKLGGTYAPRASPGPHKLREAMPMSVFLRNRLKYALTGREVT 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ QR + VD KVRTD TYP GFMDVVSI K+ E+FR+LYD KGRF +H I EEA
Sbjct: 64 LIVAQRLIKVDGKVRTDPTYPTGFMDVVSIEKSGEHFRILYDVKGRFAIHRITAEEA--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL----------- 171
Q+KLCKV+ VQ G KG+PY+ T+DGRTIRYPDP IK ND+IKL L
Sbjct: 121 ----QYKLCKVKKVQLGAKGVPYLVTHDGRTIRYPDPAIKVNDSIKLVLPDTINPAATHS 176
Query: 172 -------ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHE 224
+KI IKF+VGN+VM TGGRN GR G+I +RE+H G F+ +H++D++ H
Sbjct: 177 GAASAVATVHKIDGHIKFEVGNLVMCTGGRNMGRAGVIVHRERHMGGFDIVHVRDSMDHT 236
Query: 225 FATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQ 263
F+TRLGNVF +G+G+K WVSLPKGKGIKLSI EE +R+
Sbjct: 237 FSTRLGNVFLVGEGSKAWVSLPKGKGIKLSIAEERDQRR 275
>gi|71015994|ref|XP_758861.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
gi|46098379|gb|EAK83612.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
Length = 386
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/268 (58%), Positives = 199/268 (74%), Gaps = 9/268 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
+ RG K HLKRLNAP WMLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT RE
Sbjct: 123 LVRGPKHHLKRLNAPSSWMLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGRE 182
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI QR + +D KVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H I EEA
Sbjct: 183 VNAITAQRLIKIDGKVRTDPTYPTGFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEAT 242
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G +G+P+I T+DGRTIRYPDP IK NDT++ D+++ KI +F+
Sbjct: 243 -------YKLLKVKKVQLGARGVPHIVTHDGRTIRYPDPAIKVNDTVRFDIDSQKILDFV 295
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
FD G VMVTGGRN+GR G+I +E+H G F+ +HI+D LG +F+TRL NVF IG K
Sbjct: 296 AFDTGATVMVTGGRNQGRAGVITGKERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGTDGK 355
Query: 241 PWVSLPKGKGIKLSIIEE--ARKRQALA 266
P +S+P+G G+KL+I EE R+RQ A
Sbjct: 356 PMISMPRGGGVKLTITEERDQRRRQKEA 383
>gi|289741733|gb|ADD19614.1| ribosomal protein S4 [Glossina morsitans morsitans]
Length = 243
Score = 333 bits (853), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 160/246 (65%), Positives = 191/246 (77%), Gaps = 7/246 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL EV I+MQR + VD KVRT
Sbjct: 1 MLDKLGGVFAPRPSTGPHKLRESLPLMIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV++I KT E FRL+YD KGRF +H I EEAK +KLCKVR Q
Sbjct: 61 DPTYPAGFMDVITIEKTGEYFRLIYDVKGRFTIHRISPEEAK-------YKLCKVRKTQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KG+P+I T+DGRTIRYPDPLIKANDT+++D+ T KI +FIKFD GN+ M+TGGRN GR
Sbjct: 114 GAKGVPFIVTHDGRTIRYPDPLIKANDTVQVDIATGKIIDFIKFDSGNLCMITGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGK T+ ++SLPK G+KLSI EE
Sbjct: 174 VGTVVNRERHPGSFDIVHIKDSQGHIFATRLSNVFIIGKSTRSYISLPKDLGVKLSIAEE 233
Query: 259 ARKRQA 264
KR A
Sbjct: 234 RDKRLA 239
>gi|449269808|gb|EMC80554.1| 40S ribosomal protein S4, partial [Columba livia]
Length = 236
Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 158/243 (65%), Positives = 191/243 (78%), Gaps = 7/243 (2%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYPAGFM
Sbjct: 1 APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 60
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+SI KT E+FRL+YDTKGRF +H I EEAK +KLCKVR + G KGIP++
Sbjct: 61 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK-------YKLCKVRKIFVGTKGIPHLV 113
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+
Sbjct: 114 THDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 173
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALAT 267
H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A
Sbjct: 174 HPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQ 233
Query: 268 SAA 270
S+
Sbjct: 234 SSG 236
>gi|313236165|emb|CBY11489.1| unnamed protein product [Oikopleura dioica]
gi|313240142|emb|CBY32493.1| unnamed protein product [Oikopleura dioica]
Length = 258
Score = 332 bits (852), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 157/264 (59%), Positives = 198/264 (75%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAP HWMLDKL G +APKPS GPHK RECLPLIL LRNRL YALT E
Sbjct: 1 MTRGQKKHLKRLNAPNHWMLDKLTGVYAPKPSQGPHKQRECLPLILFLRNRLHYALTGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQR V VD KVRTD +PAGFMDV+S+ +TNE+FRL+YD KGRF +H I EE K
Sbjct: 61 VKKILMQRLVKVDGKVRTDVNFPAGFMDVISMERTNEHFRLIYDVKGRFAVHRITPEEGK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC++ + KG+P++ T+D RTIRYP+P IK ND++ +D+E+ +TE +
Sbjct: 121 -------YKLCRITKIGVAAKGVPFVVTHDARTIRYPNPDIKVNDSVIVDIESGAVTEHV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD G++ M+TGG N GRVG+I +R++H GSF+ ++I+DA G FATRL NVF IG+G +
Sbjct: 174 RFDTGSLCMITGGHNLGRVGVIASRDRHPGSFDIVNIKDATGAVFATRLDNVFIIGRGKQ 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
VSLP+ KGI++SI EE KR A
Sbjct: 234 ALVSLPRQKGIRISIAEEREKRLA 257
>gi|225713724|gb|ACO12708.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
Length = 260
Score = 332 bits (851), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 196/262 (74%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRL APK WMLDKLGG F +PSSGPHK RE +PL L LRNRL+YALT +E
Sbjct: 1 MPRGPKKHLKRLVAPKTWMLDKLGGVFTTRPSSGPHKLRESVPLTLFLRNRLRYALTAKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I QR V VD +VR D +PAGFMDV+ I +TNENFRL+YD KGRF +H I +EAK
Sbjct: 61 VGTITKQRLVKVDGRVRMDPRFPAGFMDVIQIERTNENFRLIYDVKGRFTVHRITAQEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V++V+ G K +PY+ T DGRTIRYPDP+I+ ND+I+LD+ T K + +
Sbjct: 121 -------YKLCRVKAVKTGPKNVPYLYTSDGRTIRYPDPVIRVNDSIRLDINTGKTMDSV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGGRN GRVG I +RE+H GSF+ +H++D+ GH FATRL F IGK K
Sbjct: 174 KFDTGNLCMVTGGRNTGRVGAIMHRERHPGSFDIVHVKDSNGHTFATRLDYTFVIGKDNK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P++SLPKG GIKL+I EE KR
Sbjct: 234 PYISLPKGGGIKLTIAEERDKR 255
>gi|388583766|gb|EIM24067.1| 40S ribosomal protein S4, partial [Wallemia sebi CBS 633.66]
Length = 260
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/268 (60%), Positives = 199/268 (74%), Gaps = 10/268 (3%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KKHLKRL AP WMLDKL G +AP+PS GPHK RE LPL ++LRNRLKYAL+ EV
Sbjct: 1 RGPKKHLKRLAAPSSWMLDKLSGTYAPRPSPGPHKLRESLPLTILLRNRLKYALSSEEVT 60
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
+IL QR V +D K RTD+TYP GF DV+SI + E+FR+LYD KGRF +H I DEEA
Sbjct: 61 SILQQRLVKIDGKARTDRTYPTGFQDVISIEASGEHFRILYDVKGRFTIHRITDEEA--- 117
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
QFKL KV+ G +G+P+I T+DGRTIRYPDPLIK NDT+K DL NKI +F+KF
Sbjct: 118 ----QFKLLKVKKQAIGARGVPFIVTHDGRTIRYPDPLIKVNDTVKFDLINNKIVDFVKF 173
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
+ GNVVM TGGRN+GR+G I RE+H G ++ ++I+D L +FATRL NVF +G+ K W
Sbjct: 174 ETGNVVMATGGRNQGRIGTIIGRERHLGGYDIVNIKDPLDRQFATRLTNVFVVGQ-QKSW 232
Query: 243 VSLPKGKGIKLSIIEE--ARKRQALATS 268
VSLPKG G+KL+I EE R+R+A A+
Sbjct: 233 VSLPKGGGVKLTITEERDMRRRRAQASQ 260
>gi|432097049|gb|ELK27547.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 287
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 194/264 (73%), Gaps = 29/264 (10%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 47 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 106
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR F+D KT ENFRL+YDTKGRF +H IR EEAK
Sbjct: 107 VKKICMQR-----------------FID-----KTGENFRLVYDTKGRFAVHRIRPEEAK 144
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTI YPDPLIK NDTI++DLE+ KIT+FI
Sbjct: 145 -------YKLCKVRKIFVGTKGIPHLVTHDARTICYPDPLIKVNDTIQIDLESGKITDFI 197
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ M+TGG N GR+G+I NREKH GSF+ +H++D G+ FATRL N+F IGKG K
Sbjct: 198 KFDTGNLCMITGGANLGRIGVITNREKHPGSFDVVHVKDTTGNSFATRLSNIFVIGKGNK 257
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+GKGI+L+I EE KR A
Sbjct: 258 PWISLPRGKGIRLTIAEERDKRLA 281
>gi|149244128|ref|XP_001526607.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449001|gb|EDK43257.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 246
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/251 (64%), Positives = 197/251 (78%), Gaps = 11/251 (4%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL GA+AP+ S+GPHK RE LPL++ LRNRLKYAL REV AILMQ+HV VD KVRT
Sbjct: 1 MLDKLSGAYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGREVKAILMQQHVQVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL KV+ VQ
Sbjct: 61 DATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEA-------SYKLGKVKKVQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G++GIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+KFD G +VMVTGGRN GR
Sbjct: 114 GKRGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRLVMVTGGRNMGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGIKLSIIE 257
+G I +REKH+G F+ +HI+DAL F TRL NVF IG + KPWVSLPKGKGIKLSI E
Sbjct: 174 IGTIVHREKHEGGFDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLPKGKGIKLSITE 233
Query: 258 E---ARKRQAL 265
E AR+++ L
Sbjct: 234 ERDRARQQRGL 244
>gi|351705604|gb|EHB08523.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 237
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 190/244 (77%), Gaps = 7/244 (2%)
Query: 27 FAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGF 86
AP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D K+RTD TYPAGF
Sbjct: 1 MAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKIRTDITYPAGF 60
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
MDV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR + G KGIP++
Sbjct: 61 MDVISIDKTGENFRLIYDTKGRFAIHRITPEEAK-------YKLCKVRKIFVGTKGIPHL 113
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKFD GN+ MVTGG N GR+G+I NRE
Sbjct: 114 VTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 173
Query: 207 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALA 266
+H GSF+ +H++D G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A
Sbjct: 174 RHPGSFDVVHVKDTNGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK 233
Query: 267 TSAA 270
S+
Sbjct: 234 HSSG 237
>gi|126697462|gb|ABO26688.1| ribosomal protein S4 [Haliotis discus discus]
Length = 242
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/246 (61%), Positives = 193/246 (78%), Gaps = 7/246 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG +K LKR+ APK WMLDKLGG FAP+PS+GPHK RE LP+ +++RNRLKYALTY EV
Sbjct: 4 RGRRKVLKRVTAPKSWMLDKLGGVFAPRPSTGPHKLREALPMSVLMRNRLKYALTYNEVK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ QR + VD +VRTDK +P GFMDVV+I KT+ENFR+LYD KGRF +H I+ EEAK
Sbjct: 64 KIVNQRLIKVDGRVRTDKNFPTGFMDVVTIEKTSENFRVLYDVKGRFIVHRIKPEEAK-- 121
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
+KLC+VR V G KG+PY+ T DGRTIRYPDP++K NDTI +D+ T K+ +++KF
Sbjct: 122 -----YKLCRVRGVATGPKGVPYLTTNDGRTIRYPDPVVKVNDTIMVDIATGKMKDYVKF 176
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
+ GN+ +TGG N GRVG+I NREKH GSF+ +H++D+LGH FATR+ VF IGKG KPW
Sbjct: 177 ESGNLCTITGGHNLGRVGVIINREKHPGSFDIVHVKDSLGHTFATRMSYVFVIGKGNKPW 236
Query: 243 VSLPKG 248
+SLP+G
Sbjct: 237 ISLPRG 242
>gi|323457181|gb|EGB13047.1| hypothetical protein AURANDRAFT_69604 [Aureococcus anophagefferens]
Length = 260
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 193/262 (73%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+NAP+HWML K+ GAFAP+PS+GPHK RECLPL+LILRNRLKYA++ +E
Sbjct: 1 MARGPKKHLKRINAPRHWMLGKMDGAFAPRPSTGPHKLRECLPLVLILRNRLKYAISGQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I M +HV VD KVRTD TYPAGFMDV+S+ + + FRL+YDTKGRF LH I DEE
Sbjct: 61 AKQICMSKHVKVDGKVRTDPTYPAGFMDVISMDASGDQFRLMYDTKGRFTLHRISDEEK- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V +V K IP + T+DGRT+RYPDP + +DT+KLD+ T KI F
Sbjct: 120 ------GYKLCRVNAVYVTAKKIPVLTTHDGRTVRYPDPSVAVHDTVKLDIATGKIVSFQ 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VG +T GRN GRVG I EKH GSF+ + ++DA H FATRLGNVF IGK
Sbjct: 174 KFEVGKTCTITKGRNTGRVGTIMTVEKHPGSFDIVTVKDASNHTFATRLGNVFVIGKDDD 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
V+LPKGKGIKL+IIEE K+
Sbjct: 234 LDVTLPKGKGIKLTIIEERTKK 255
>gi|349802859|gb|AEQ16902.1| putative 40s ribosomal protein s4 [Pipa carvalhoi]
Length = 235
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/243 (65%), Positives = 191/243 (78%), Gaps = 8/243 (3%)
Query: 26 AFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAG 85
FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYPAG
Sbjct: 1 VFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV-KICMQRFIKIDGKVRTDITYPAG 59
Query: 86 FMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPY 145
FMDV+SI KT E+FRL+YDTKGRF +H I EEAK +KLCKVR G KGIP+
Sbjct: 60 FMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK-------YKLCKVRKTWVGTKGIPH 112
Query: 146 INTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNR 205
+ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NR
Sbjct: 113 LVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 172
Query: 206 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQAL 265
E+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE KR A
Sbjct: 173 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERDKRLAA 232
Query: 266 ATS 268
S
Sbjct: 233 KQS 235
>gi|242024748|ref|XP_002432788.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
gi|212518297|gb|EEB20050.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
Length = 245
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 197/253 (77%), Gaps = 9/253 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD K+RT
Sbjct: 1 MLDKLGGVYAPRPSAGPHKLRESLPLVIFLRNRLKYALTNCEVKKIVMQRLIKVDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D YPAGFMDV+SI K NE FRL+YD KGRF +H I +EA +KLCKV+ VQ
Sbjct: 61 DPNYPAGFMDVISIEKINELFRLIYDVKGRFTIHRITPDEA-------TYKLCKVKKVQT 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KG+P++ T+DGRTIRYPDPLIK NDTI+L++ T+KI +FIKF+ GN+ M+TGGRN GR
Sbjct: 114 GPKGVPFLVTHDGRTIRYPDPLIKVNDTIQLEIATSKILDFIKFESGNLCMITGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG + NRE+H GSF+ +HI+D GH FATRL NVF IGKG+K +VSLP+GKG+KLS+ EE
Sbjct: 174 VGTVVNRERHPGSFDIVHIKDTQGHTFATRLNNVFIIGKGSKAYVSLPRGKGVKLSVAEE 233
Query: 259 ARKRQALATSAAA 271
KR LA AA+
Sbjct: 234 RDKR--LAAKAAS 244
>gi|355336756|gb|AER57863.1| 40S ribosomal protein S4 [Acytostelium subglobosum]
Length = 267
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 198/258 (76%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +AP+PS+GP K RECLPLI+ILRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGKWAPRPSAGPRKLRECLPLIIILRNRLKYALTGTE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V ILMQRH+ V+ VRTD +P GFMDV++I KT E+FRLL+DTKGRF+L I+ EAK
Sbjct: 61 VTKILMQRHIQVNGVVRTDPRFPVGFMDVITIEKTKEHFRLLFDTKGRFQLQRIQPNEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
F L +V V+ G +GIPY++T +G+T RYPDP IK +DT+K+DL+T KIT FI
Sbjct: 121 -------FILTRVTKVETGLQGIPYVHTDNGQTFRYPDPAIKIHDTVKIDLDTQKITAFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
F++ N+ MVTGG N GRVG+I NRE+H GSF+ +H+ D++GH FATRLGNVF IGKG+
Sbjct: 174 PFELNNLCMVTGGHNLGRVGVITNRERHPGSFDIVHVTDSVGHSFATRLGNVFVIGKGST 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
+VSL KG++ S +++
Sbjct: 234 TFVSLLSSKGVRKSRMDD 251
>gi|357017173|gb|AET50615.1| hypothetical protein [Eimeria tenella]
Length = 262
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/258 (62%), Positives = 195/258 (75%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWML+K+ G +AP+PS GPHK RECLPL ++LRNRLKYALTY+E
Sbjct: 1 MARGPKKHLKRLAAPSHWMLNKITGHYAPRPSPGPHKLRECLPLAILLRNRLKYALTYQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I+MQR V VD KVRTD+ YPAGFMDVVS+ KT ++FRLL DTKGRF I EEA
Sbjct: 61 TKLIVMQRLVKVDGKVRTDQCYPAGFMDVVSLEKTQQHFRLLLDTKGRFVPRPISAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ V G K IP + T+D RTIR+P P IK +DTI+L + +KI +
Sbjct: 120 ------SYKLCRVKKVLIGPKAIPMLVTHDARTIRFPHPNIKVHDTIRLSIADSKIVDTY 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VGNV MVTGG N GRVG I NRE+H GSF+ +H++D+ G+EFATR+ NVF IGKG K
Sbjct: 174 KFEVGNVAMVTGGHNVGRVGTIVNRERHLGSFDIVHLRDSRGNEFATRISNVFVIGKGEK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
P VSLPK KGI+L+I E+
Sbjct: 234 PMVSLPKDKGIRLTIFED 251
>gi|341888765|gb|EGT44700.1| CBN-RPS-4 protein [Caenorhabditis brenneri]
gi|341900288|gb|EGT56223.1| hypothetical protein CAEBREN_12475 [Caenorhabditis brenneri]
Length = 259
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/262 (62%), Positives = 193/262 (73%), Gaps = 7/262 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KKHLKRL APKHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPKHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
IL QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEA--- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKLCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+F+KF
Sbjct: 119 ----DFKLCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKF 174
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
+ GN+ VTGGRN GRVGII +RE+ G+F+ IHI+DA GH FATR+ NVF IGKG K
Sbjct: 175 EPGNLAYVTGGRNVGRVGIIGHRERLPGAFDIIHIKDAAGHSFATRISNVFVIGKGNKAL 234
Query: 243 VSLPKGKGIKLSIIEEARKRQA 264
VSLP G G++L+I EE KR A
Sbjct: 235 VSLPSGGGVRLTIAEERDKRMA 256
>gi|409041189|gb|EKM50675.1| hypothetical protein PHACADRAFT_264068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 245
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/250 (62%), Positives = 192/250 (76%), Gaps = 9/250 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS GPHK RE LPL + LRNRLKYALT +EV++I+MQR V VD KVRT
Sbjct: 1 MLDKLDGTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTAKEVLSIVMQRLVKVDNKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGF DV+S+ K+ E+FRLLYD KGRF +H I EEA +KL KV+ +
Sbjct: 61 DPTYPAGFQDVISLEKSGEHFRLLYDVKGRFTVHRITPEEA-------TYKLLKVKKIGI 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KG+PYI T+DGRTIRYPDPLIK NDT+K + ET KIT+F+KFD GN+VMVTGGRN GR
Sbjct: 114 GAKGVPYIITHDGRTIRYPDPLIKVNDTVKFEFETGKITDFVKFDTGNIVMVTGGRNMGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
G+I +REKH G ++ +HI+D+L FATR+ NVF IG+G KPW+SLP+GKG KL+I EE
Sbjct: 174 AGVIVHREKHIGGYDIVHIKDSLDRTFATRISNVFVIGEGIKPWISLPRGKGTKLTITEE 233
Query: 259 --ARKRQALA 266
R+RQ A
Sbjct: 234 RDVRRRQRAA 243
>gi|156088951|ref|XP_001611882.1| ribosomal protein S4e [Babesia bovis T2Bo]
gi|154799136|gb|EDO08314.1| ribosomal protein S4e, putative [Babesia bovis]
Length = 262
Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/267 (59%), Positives = 197/267 (73%), Gaps = 7/267 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG+KKH+KR+NAP HWMLDKL G +APKPS GPHK ECLPLIL+LRNRLKYALTY E
Sbjct: 1 MGRGVKKHMKRINAPSHWMLDKLSGRYAPKPSPGPHKKTECLPLILLLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQ+ V +D KVRTD TYP GFMDVVS+ +TNE+FRLLYDTKGRF H I EEA
Sbjct: 61 VKLIVMQKVVRIDGKVRTDMTYPIGFMDVVSLERTNEHFRLLYDTKGRFVPHKITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V G K + T+DGRTIR+ P +K D++++DLET K+ EF
Sbjct: 120 ------SYKLCRVIKTFLGPKEVGMAVTHDGRTIRFVHPDVKPGDSLRIDLETGKVLEFF 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VGN+VM+TGG N+GRVG I ++E+H GSF+ IH++D LG+ F TR NVF IG GT
Sbjct: 174 KFEVGNLVMITGGHNQGRVGTIVHKERHPGSFDLIHVRDELGNNFCTRCSNVFVIGVGTN 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALAT 267
+VSLPK +GIK IIE+ R A A+
Sbjct: 234 NYVSLPKERGIKKGIIEDRADRLARAS 260
>gi|58257447|gb|AAW69345.1| 40S ribosomal protein S4-A-like protein [Magnaporthe grisea]
Length = 244
Score = 325 bits (834), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 190/246 (77%), Gaps = 8/246 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE AILMQR V VD KVRT
Sbjct: 1 MLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDVVSI KT ENFRL+YDTKGRF +H I+ EEA ++KL KV+ VQ
Sbjct: 61 DSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEA-------EYKLGKVKRVQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G+ GIP++ T+D RTIRYPDPLIK NDT+K++L+T KIT+FIKFD G + MVT G N GR
Sbjct: 114 GRGGIPFLVTHDARTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTAGNNMGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+I +RE+H G F +H++DA+ + F TR NVF IG KPW+SLPKGKG+KL+I EE
Sbjct: 174 VGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKLTIAEE 232
Query: 259 ARKRQA 264
+R+A
Sbjct: 233 RDRRRA 238
>gi|380795755|gb|AFE69753.1| 40S ribosomal protein S4, Y isoform 1 Y isoform, partial [Macaca
mulatta]
Length = 244
Score = 325 bits (834), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 155/251 (61%), Positives = 189/251 (75%), Gaps = 7/251 (2%)
Query: 20 LDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTD 79
LDKL G + P+PS+GPH+ RE LPLI+ LRNRLKYALT EV I MQR + +D KVR D
Sbjct: 1 LDKLTGGYGPRPSTGPHQLREFLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 60
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFG 139
TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK +KLCKVR + G
Sbjct: 61 VTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK-------YKLCKVRKITMG 113
Query: 140 QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRV 199
KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKF+ GNV MV GG N GRV
Sbjct: 114 MKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRV 173
Query: 200 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA 259
G+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKG++L+I EE
Sbjct: 174 GVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEER 233
Query: 260 RKRQALATSAA 270
KR A S+
Sbjct: 234 DKRLATKQSSG 244
>gi|403308090|ref|XP_003944510.1| PREDICTED: 40S ribosomal protein S4, X isoform [Saimiri boliviensis
boliviensis]
Length = 360
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/272 (59%), Positives = 192/272 (70%), Gaps = 27/272 (9%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT--- 57
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
D+ +SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 58 -----------------GDEXXXXXXXXXISIDKTGENFRLIYDTKGRFAVHRITPEEAK 100
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 101 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFI 153
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTGG N GR+G+I NRE+H GSF +H++DA G+ FATRL N+F IGKG K
Sbjct: 154 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFNVVHVKDANGNSFATRLSNIFVIGKGNK 213
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
PW+SLP+GKGI+L+I EE KR A S +
Sbjct: 214 PWISLPRGKGIRLTIAEERDKRLAAKQSRVCE 245
>gi|226469682|emb|CAX76671.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 245
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/244 (63%), Positives = 186/244 (76%), Gaps = 7/244 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGG FAP+PS+GPHK RECLPL ++LRNRLKYALTY E IL QR V VD +VRT
Sbjct: 1 MLDKLGGNFAPRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK +KLCKVR V
Sbjct: 61 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAK-------YKLCKVRKVLV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGGRN GR
Sbjct: 114 GHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+LSIIEE
Sbjct: 174 VGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEE 233
Query: 259 ARKR 262
KR
Sbjct: 234 RDKR 237
>gi|119632119|gb|EAX11714.1| hCG38986, isoform CRA_b [Homo sapiens]
Length = 245
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/252 (61%), Positives = 189/252 (75%), Gaps = 7/252 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +D KVR
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRV 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H I EEAK +KLCKVR +
Sbjct: 61 DITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK-------YKLCKVRKITV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD GNV MV G N GR
Sbjct: 114 GTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+L+I EE
Sbjct: 174 VGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEE 233
Query: 259 ARKRQALATSAA 270
KR A S+
Sbjct: 234 RDKRLAAKQSSG 245
>gi|328859105|gb|EGG08215.1| hypothetical protein MELLADRAFT_42942 [Melampsora larici-populina
98AG31]
Length = 265
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 154/257 (59%), Positives = 192/257 (74%), Gaps = 7/257 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG KKH+KRL AP WMLDKLGG +AP+ + GPHK RE LPL ++LRNRLKYALT REV
Sbjct: 3 VRGQKKHMKRLAAPSSWMLDKLGGTYAPRSNPGPHKLRESLPLSILLRNRLKYALTGREV 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ QR + VD KVRTD +P GFMDVVSI K+ ENFR+LYD KGRF +H I EEA
Sbjct: 63 TLIVAQRLIKVDNKVRTDPKFPTGFMDVVSIEKSGENFRVLYDVKGRFTIHRISAEEA-- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ VQ G KG+P++ T+DGRTIRYPDP+IK NDTI+ DLE NKI ++I
Sbjct: 121 -----AYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPIIKVNDTIRFDLENNKIVDYIP 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+ G++VM TGGRN+GRVG I +REKH G ++ +H++D L F+TR+GN+ IG K
Sbjct: 176 FEAGSLVMCTGGRNQGRVGTIVHREKHIGGYDIVHVRDVLDRAFSTRIGNIQVIGTHGKA 235
Query: 242 WVSLPKGKGIKLSIIEE 258
+SLP+G G+KLSI EE
Sbjct: 236 GISLPRGGGVKLSIAEE 252
>gi|256072591|ref|XP_002572618.1| 40S ribosomal protein S4 [Schistosoma mansoni]
gi|360044251|emb|CCD81798.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
Length = 245
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/244 (63%), Positives = 185/244 (75%), Gaps = 7/244 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKLGG FAP+PS+GPHK RECLPL + LRNRLKYALTY E IL QR V VD +VRT
Sbjct: 1 MLDKLGGNFAPRPSTGPHKLRECLPLCIFLRNRLKYALTYTECTKILAQRLVKVDGRVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
DK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK +KLCKV+ V
Sbjct: 61 DKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAK-------YKLCKVKKVLV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G G+PYI T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGGRN GR
Sbjct: 114 GHGGVPYIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+LSIIEE
Sbjct: 174 VGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKNRGIRLSIIEE 233
Query: 259 ARKR 262
KR
Sbjct: 234 RDKR 237
>gi|37779112|gb|AAP20216.1| 40S ribosomal protein S4 [Pagrus major]
Length = 225
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/232 (65%), Positives = 183/232 (78%), Gaps = 7/232 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DL+T KIT+FI
Sbjct: 121 -------YKLCKVKKLIVGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNV 232
KFD N+ MVTGG N GR+G+I NRE+H GSF+ +H+ D+ G+ FATRL N+
Sbjct: 174 KFDTANLCMVTGGANLGRIGVITNRERHPGSFDVVHVTDSTGNNFATRLSNI 225
>gi|268535888|ref|XP_002633079.1| C. briggsae CBR-RPS-4 protein [Caenorhabditis briggsae]
Length = 259
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 192/262 (73%), Gaps = 7/262 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KKHLKRL APKHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPKHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
IL QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEA--- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKLCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+F+KF
Sbjct: 119 ----DFKLCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKF 174
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
+ GN+ VTGGRN GR+GII +RE+ G+ + IHI+DA GH FATR+ NVF IGKG K
Sbjct: 175 EPGNLAYVTGGRNVGRIGIIGHRERLPGASDIIHIKDAAGHSFATRISNVFVIGKGNKAL 234
Query: 243 VSLPKGKGIKLSIIEEARKRQA 264
VSLP G G++LSI EE KR A
Sbjct: 235 VSLPSGNGVRLSIAEERDKRIA 256
>gi|167391306|ref|XP_001739715.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165896474|gb|EDR23879.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 326
Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/259 (60%), Positives = 188/259 (72%), Gaps = 7/259 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLILILRNRL YAL RE
Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK
Sbjct: 61 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCK+ G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+
Sbjct: 121 -------FKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN M+ GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+
Sbjct: 174 KFDIGNTAMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTE 233
Query: 241 PWVSLPKGKGIKLSIIEEA 259
V+LP KGIK ++++
Sbjct: 234 TLVNLPLDKGIKKPLLQQV 252
>gi|67465453|ref|XP_648911.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|67466127|ref|XP_649211.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|67481379|ref|XP_656039.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|167381290|ref|XP_001735654.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|56465221|gb|EAL43529.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56465596|gb|EAL43825.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56473205|gb|EAL50644.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902270|gb|EDR28139.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 326
Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/259 (60%), Positives = 188/259 (72%), Gaps = 7/259 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLILILRNRL YAL RE
Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK
Sbjct: 61 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCK+ G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+
Sbjct: 121 -------FKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN M+ GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+
Sbjct: 174 KFDIGNTAMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTE 233
Query: 241 PWVSLPKGKGIKLSIIEEA 259
V+LP KGIK ++++
Sbjct: 234 TLVNLPLDKGIKKPLLQQV 252
>gi|308491676|ref|XP_003108029.1| CRE-RPS-4 protein [Caenorhabditis remanei]
gi|308249976|gb|EFO93928.1| CRE-RPS-4 protein [Caenorhabditis remanei]
Length = 259
Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 192/262 (73%), Gaps = 7/262 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KKHLKRL APKHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPKHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
IL QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA
Sbjct: 62 KILTQRIVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEA--- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKLCKVRSV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KI++F+KF
Sbjct: 119 ----DFKLCKVRSVRTLNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKISDFVKF 174
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
+ GN+ VTGGRN GR+GII +RE+ G+ + IHI+D+ GH FATR+ NVF IGKG K
Sbjct: 175 EPGNLAYVTGGRNVGRIGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKAL 234
Query: 243 VSLPKGKGIKLSIIEEARKRQA 264
VSLP G G++LSI EE KR A
Sbjct: 235 VSLPSGNGVRLSIAEERDKRIA 256
>gi|429329492|gb|AFZ81251.1| 40S ribosomal protein S4, putative [Babesia equi]
Length = 263
Score = 322 bits (826), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 161/269 (59%), Positives = 196/269 (72%), Gaps = 7/269 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH+KR+NAP HWMLDKL G +APK S GPHK RECLPL+++LRNRLKYALTY E
Sbjct: 1 MGRGPKKHMKRINAPSHWMLDKLTGKYAPKASPGPHKLRECLPLLVLLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYP GFMD+VS+ +TNE FR+LYDTKGRF H I EEA
Sbjct: 61 VKLIVMQRLVKVDGKVRTDITYPTGFMDIVSLDRTNEFFRMLYDTKGRFCPHKITPEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ G K + T+DGRTIRY P IKA D++++DL T KI +F+
Sbjct: 120 ------SYKLCRVKKTFLGPKEVNIAITHDGRTIRYVHPEIKAGDSVRVDLATGKILDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF++GN+VMVTGG N GRVG I N+EKH GSF+ IHI+D+ F+TR NVF IG G++
Sbjct: 174 KFEIGNLVMVTGGHNVGRVGTIVNKEKHPGSFDLIHIKDSQDSTFSTRSSNVFVIGLGSQ 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
P+VSLP GI+ SIIE+ R A A A
Sbjct: 234 PYVSLPSDNGIRKSIIEQRAIRLAKAARA 262
>gi|428174786|gb|EKX43680.1| small subunit ribosomal protein S4e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 263
Score = 322 bits (826), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 195/264 (73%), Gaps = 8/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG +KHLKR+ APKHWMLDKL G FAP+PS+GPHK REC+PL+L++RNRLKYALTY E
Sbjct: 1 MARGPRKHLKRITAPKHWMLDKLTGVFAPRPSAGPHKLRECIPLLLLIRNRLKYALTYSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I+ R + VD K+RTD TYP GFMDV+SI KT E+FRLL+DTKGRF LH + +A
Sbjct: 61 AKVIMNSRSIKVDGKIRTDVTYPCGFMDVLSIEKTGEHFRLLHDTKGRFVLHRLTQADA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q KLC+V+S+ G +PYI T+DGRTIRYPDPLIK NDT+++DL TN I F
Sbjct: 120 ------QHKLCRVKSLGVGINKVPYIVTHDGRTIRYPDPLIKPNDTVQIDLATNTIIGFS 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VGNV +TGG N GRVGII++ EKH GS +HI+D G +ATR NVF + G K
Sbjct: 174 KFEVGNVCAITGGHNIGRVGIIQSTEKHPGSHNIVHIKDKTGATWATRQSNVFVLATGKK 233
Query: 241 PWVS-LPKGKGIKLSIIEEARKRQ 263
P + + + +GIK SIIEE R+RQ
Sbjct: 234 PEKAYILRTQGIKHSIIEEQRRRQ 257
>gi|444721070|gb|ELW61824.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 252
Score = 322 bits (826), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 156/261 (59%), Positives = 192/261 (73%), Gaps = 12/261 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLK++ APKHWMLDKL FA +PS+GPHK RECLPLI+ LRNRLKYAL E
Sbjct: 1 MVRGPKKHLKQVGAPKHWMLDKLTNVFALRPSTGPHKLRECLPLIIFLRNRLKYALAGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+Y +H I +EA
Sbjct: 61 VKKICMQRFIKIDGKVRTDTTYPAGFMDVISIDKTRENFRLIY-----VAVHRITPQEA- 114
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKVR + G KG P++ T+D TI YPDPLIK NDTI++D+ET K ++FI
Sbjct: 115 ------QYKLCKVRKIFEGTKGTPHLVTHDAHTICYPDPLIKVNDTIQIDVETGKSSDFI 168
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+FD GN+ MVTGG N GR+G+I NRE+H GS + +H++DA + FATRL N+F IGKG K
Sbjct: 169 EFDTGNLCMVTGGANLGRIGVITNRERHPGSSDVVHVKDANDNSFATRLSNIFVIGKGHK 228
Query: 241 PWVSLPKGKGIKLSIIEEARK 261
PW+SLP+GKG+ L+I E K
Sbjct: 229 PWISLPRGKGVHLTIARERDK 249
>gi|399218543|emb|CCF75430.1| unnamed protein product [Babesia microti strain RI]
Length = 261
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 196/258 (75%), Gaps = 7/258 (2%)
Query: 7 KHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
KHLKR+NAP HWML KL G +APKPS GPHKSRECLPLI++LR+RLKYALTY EV I M
Sbjct: 6 KHLKRINAPSHWMLGKLRGKYAPKPSPGPHKSRECLPLIILLRDRLKYALTYDEVKLIAM 65
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
Q+ V VD K+RTD YP G+MDVV+I +TNENFRLLYDTKGRF I EEA
Sbjct: 66 QKLVKVDGKIRTDTCYPIGYMDVVTIDRTNENFRLLYDTKGRFVPIKISPEEA------- 118
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 186
++KLC+V+ V G K IP T+DGRTIR+ P +KA DT++LD+ + K+ EF+KF++GN
Sbjct: 119 EYKLCRVKRVVLGPKEIPLAVTHDGRTIRFIHPEVKAGDTLRLDISSGKVLEFLKFEIGN 178
Query: 187 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 246
+ MVTGG N GRVGII +R+KH G F+ I+I+D++G+ F+TR+ NVF IGKG K +V+LP
Sbjct: 179 LAMVTGGHNVGRVGIITSRQKHDGGFDIINIRDSIGNSFSTRVSNVFVIGKGPKSYVTLP 238
Query: 247 KGKGIKLSIIEEARKRQA 264
K KGIK +IIEE R A
Sbjct: 239 KYKGIKHTIIEERNARLA 256
>gi|17543386|ref|NP_501103.1| Protein RPS-4 [Caenorhabditis elegans]
gi|75023042|sp|Q9N3X2.1|RS4_CAEEL RecName: Full=40S ribosomal protein S4
gi|351051215|emb|CCD74049.1| Protein RPS-4 [Caenorhabditis elegans]
Length = 259
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 190/262 (72%), Gaps = 7/262 (2%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KKHLKRL AP HWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPSHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
IL QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEA--- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKLCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+ +KF
Sbjct: 119 ----DFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKF 174
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
+ GN+ VTGGRN GRVGII +RE+ G+ + IHI+D+ GH FATR+ NVF IGKG K
Sbjct: 175 EPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKAL 234
Query: 243 VSLPKGKGIKLSIIEEARKRQA 264
VSLP G GI+LSI EE KR A
Sbjct: 235 VSLPTGAGIRLSIAEERDKRMA 256
>gi|167389537|ref|XP_001738997.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165897520|gb|EDR24644.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 390
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/259 (60%), Positives = 187/259 (72%), Gaps = 7/259 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
ARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLILILRNRL YAL RE
Sbjct: 65 FARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 124
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK
Sbjct: 125 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 184
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCK+ G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+
Sbjct: 185 -------FKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFV 237
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN M+ GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+
Sbjct: 238 KFDIGNTAMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTE 297
Query: 241 PWVSLPKGKGIKLSIIEEA 259
V+LP KGIK ++++
Sbjct: 298 TLVNLPLDKGIKKPLLQQV 316
>gi|443894390|dbj|GAC71738.1| uncharacterized conserved protein [Pseudozyma antarctica T-34]
Length = 315
Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/297 (53%), Positives = 198/297 (66%), Gaps = 38/297 (12%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLI--------------- 45
+ RG K HLKRLNAP WMLDKL G +AP+PS+GPHK RE LPL+
Sbjct: 23 LVRGPKHHLKRLNAPSSWMLDKLSGTYAPRPSNGPHKLREALPLVVSIDSTRQIQQHPAD 82
Query: 46 --------------LILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVS 91
++LRNRLKYALT REV AI QR + VD KVRTD TYP GF DVVS
Sbjct: 83 KPAQHRTDERDADKILLRNRLKYALTGREVNAITAQRLIKVDGKVRTDPTYPTGFQDVVS 142
Query: 92 IPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDG 151
I K+ E+FR+LYD KGRF +H I EEA +KL KV+ VQ G +G+P++ T+DG
Sbjct: 143 IEKSGEHFRILYDAKGRFIVHRITAEEAT-------YKLLKVKKVQLGARGVPHVVTHDG 195
Query: 152 RTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGS 211
RTIRYPDP IK NDT++ D+E+ KI +F+ FD G VMVTGGRN GR G+I +E+H G
Sbjct: 196 RTIRYPDPAIKVNDTVRFDIESQKILDFVTFDTGATVMVTGGRNMGRAGVITGKERHLGG 255
Query: 212 FETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE--ARKRQALA 266
F+ +HI+D LG +F+TRL NVF IG KP +S+P+G G+KL+I EE R+RQ A
Sbjct: 256 FDIVHIRDVLGRDFSTRLSNVFVIGTDGKPMISMPRGGGVKLTITEERDQRRRQKEA 312
>gi|401396346|ref|XP_003879799.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
gi|325114207|emb|CBZ49764.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
Length = 263
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/257 (62%), Positives = 204/257 (79%), Gaps = 7/257 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG +KHLKR+ AP HWMLDKL G +AP+PS GPHK RE +PL+++LRNRL+YALTYRE
Sbjct: 1 MARGPRKHLKRVAAPHHWMLDKLTGHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ I+MQR + VD KVRTD+ YPAGFMDV+SI KT E+FR+L+DTKGRF H IRDEEA
Sbjct: 61 VMMIVMQRLIKVDNKVRTDQCYPAGFMDVISIEKTKEHFRMLFDTKGRFVPHPIRDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ V G KG+P + T+DGRT+RYP P IKA+D ++LDL T KI + +
Sbjct: 120 ------SYKLCRVKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCVRLDLNTGKIVDTL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+ MVTGG N GRVG++ +RE+H G F+ IH++DA G+EFATR+ NVF IGKG K
Sbjct: 174 KFEAGNLAMVTGGHNVGRVGVVVHRERHLGGFDIIHLRDAKGNEFATRISNVFIIGKGEK 233
Query: 241 PWVSLPKGKGIKLSIIE 257
W+SLPK KGI+LSI+E
Sbjct: 234 AWISLPKEKGIRLSIME 250
>gi|47208976|emb|CAF90008.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/252 (61%), Positives = 189/252 (75%), Gaps = 15/252 (5%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEAK +KLCKV+ +
Sbjct: 61 DITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK-------YKLCKVKKIII 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDPLIK NDT+++DLE+ KIT+FIKFD G N GR
Sbjct: 114 GTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLESGKITDFIKFDTGA--------NLGR 165
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
+G+I NRE+H GSF+ +H++D G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE
Sbjct: 166 IGVITNRERHPGSFDVVHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEE 225
Query: 259 ARKRQALATSAA 270
KR A +++
Sbjct: 226 RDKRLAAKQASS 237
>gi|67537248|ref|XP_662398.1| hypothetical protein AN4794.2 [Aspergillus nidulans FGSC A4]
gi|40741174|gb|EAA60364.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 239
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/244 (61%), Positives = 188/244 (77%), Gaps = 8/244 (3%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTY 82
+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VD KVRTD TY
Sbjct: 1 MSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRTDPTY 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKG 142
PAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA ++KLCKV+ VQ G+ G
Sbjct: 61 PAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA-------EYKLCKVKKVQLGKGG 113
Query: 143 IPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGII 202
IP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F +FD G V MVTGGRN GRVG++
Sbjct: 114 IPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTGGRNMGRVGVV 173
Query: 203 KNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 262
+RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R
Sbjct: 174 THRERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRR 232
Query: 263 QALA 266
+A A
Sbjct: 233 RAYA 236
>gi|115402491|ref|XP_001217322.1| 40S ribosomal protein S4 [Aspergillus terreus NIH2624]
gi|114189168|gb|EAU30868.1| 40S ribosomal protein S4-A [Aspergillus terreus NIH2624]
Length = 239
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/246 (61%), Positives = 189/246 (76%), Gaps = 8/246 (3%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTY 82
+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE AI+MQR + VD KVRTD TY
Sbjct: 1 MSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRTDPTY 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKG 142
PAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA ++KLCKV+ VQ G+ G
Sbjct: 61 PAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEA-------EYKLCKVKRVQLGKGG 113
Query: 143 IPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGII 202
IP++ T+D RTIRYPDP I+ NDT+K+DL T KIT+F++FD G V MVTGGRN GRVG++
Sbjct: 114 IPFLVTHDARTIRYPDPAIRVNDTVKVDLATGKITDFVRFDTGVVCMVTGGRNMGRVGVV 173
Query: 203 KNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 262
+RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+KLSI EE +R
Sbjct: 174 THRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRR 232
Query: 263 QALATS 268
+A A +
Sbjct: 233 RAHAIA 238
>gi|331216263|ref|XP_003320811.1| 40S ribosomal protein S4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299801|gb|EFP76392.1| 40S ribosomal protein S4-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/262 (58%), Positives = 195/262 (74%), Gaps = 7/262 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
RG KKH+KRL AP WMLDKLGG +AP+ + GPHK RE LPL ++LR+RLKYALT REV
Sbjct: 3 VRGQKKHMKRLAAPSSWMLDKLGGTYAPRSNPGPHKLRESLPLSVLLRHRLKYALTGREV 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ QR + +D KVRTD +P GFMDV+SI K+ E+FR+++D KGRF +H I EEA
Sbjct: 63 TLIVAQRLIKIDNKVRTDPKFPTGFMDVISIEKSGEHFRVMFDIKGRFTVHRISAEEA-- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ VQ G KG+P+I T+DGRTIRYPDP+IK NDTIK DL NKI + +
Sbjct: 121 -----TYKLCKVKRVQLGNKGVPFIVTHDGRTIRYPDPIIKVNDTIKFDLVQNKIVDTLP 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F+VGN+VM TGGRN+GRVG I +REKH G ++ +H++D + F+TR+GNV IG KP
Sbjct: 176 FEVGNLVMCTGGRNQGRVGTILSREKHVGGYDIVHVRDVIDRTFSTRIGNVQVIGAHGKP 235
Query: 242 WVSLPKGKGIKLSIIEEARKRQ 263
VSLP+G G+KL+I EE +R+
Sbjct: 236 SVSLPRGGGVKLTIAEERDQRR 257
>gi|188572462|gb|ACD65137.1| putative 40S ribosomal protein RPS4 [Phoronis muelleri]
Length = 229
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/236 (63%), Positives = 181/236 (76%), Gaps = 7/236 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KH+KRLNAPKHWMLDKLGG FAP+PS+GPHK RECLPL++ LRNRLKYALTY E
Sbjct: 1 MVRGPRKHMKRLNAPKHWMLDKLGGVFAPRPSTGPHKLRECLPLMVFLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I+MQR + VD KVRTD YPAGFMDV++I KT ENFRL+YD KGRF +H I EEA
Sbjct: 61 CKKIVMQRLIKVDGKVRTDFCYPAGFMDVITIEKTGENFRLIYDVKGRFTVHRITKEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR V G KG+P I T+DGRTIRYPDP+ K NDT+++D+ + KI +FI
Sbjct: 120 ------GYKLCKVRKVYTGPKGVPLIVTHDGRTIRYPDPMCKVNDTVQVDIASGKIKDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 236
KFD GN+ M+TGGRN RVG++ +RE+H GSF+ HI+D GH FAT++G IG
Sbjct: 174 KFDSGNLCMITGGRNLRRVGLVTHRERHPGSFDVCHIKDVNGHTFATKVGKCVIIG 229
>gi|164656677|ref|XP_001729466.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
gi|159103357|gb|EDP42252.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
Length = 287
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/283 (55%), Positives = 194/283 (68%), Gaps = 32/283 (11%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIL-------------- 46
M RG K HLK L AP WMLDKL G +AP+PS+GPHK RE LPL+L
Sbjct: 1 MVRGPKHHLKHLAAPSSWMLDKLSGTYAPRPSTGPHKLREALPLVLCLRLAKLICEQGVA 60
Query: 47 -----------ILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT 95
+LRNRLKYALT REV++I QR + VD KVRTD T+P GFMDVVSI K+
Sbjct: 61 LVLALAVVIWILLRNRLKYALTGREVLSITQQRIIKVDNKVRTDPTFPTGFMDVVSIEKS 120
Query: 96 NENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIR 155
E+FR+LYD KGRF +H I EEA Q+KL KV+ VQ G KG+P I T+DGRT+R
Sbjct: 121 GEHFRILYDVKGRFVVHRITAEEA-------QYKLLKVKRVQLGAKGVPLIVTHDGRTLR 173
Query: 156 YPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 215
YPDPL++ANDT+K DL NK+ +FIKFD G VM+TGGRN GR G + +RE+H G F+ +
Sbjct: 174 YPDPLVRANDTVKFDLINNKMVDFIKFDTGAQVMITGGRNVGRAGQMIHRERHHGGFDIV 233
Query: 216 HIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
H++D G EF+TRL NVF IG K W+S+P+G G+KL+I EE
Sbjct: 234 HVRDPAGREFSTRLSNVFVIGDHEKRWISMPRGGGVKLTITEE 276
>gi|440293545|gb|ELP86648.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
gi|440298945|gb|ELP91560.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
Length = 328
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 158/262 (60%), Positives = 187/262 (71%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLILI+RNRL YAL RE
Sbjct: 1 MARGDRHHLKRLNAPHHWMLSKLGGTFAPKPSGGPHGMKECLPLILIMRNRLHYALNARE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL R+V +D KVRTD +P GFMDV+SIP+T E FRLLY+TK RF L + E++
Sbjct: 61 VQMILKNRNVKIDGKVRTDSRFPVGFMDVLSIPRTKEYFRLLYNTKRRFCLVPLSKEQS- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
KLCKV G GIPYI T+DGRTIRYP P I+ANDTIKLDL NKI +F+
Sbjct: 120 ------TIKLCKVEKRTLGTFGIPYIITHDGRTIRYPHPEIQANDTIKLDLVNNKIVDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVGN M+ GG + GR+G++ RE H GSFE +HI+DA G F TRL NVF IGKGT+
Sbjct: 174 KFDVGNTAMLIGGNSMGRIGVVVKREVHPGSFEIVHIKDANGTIFTTRLANVFIIGKGTE 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
V+LP +GIK +I+ +R
Sbjct: 234 TLVNLPLDQGIKKPLIKAVNER 255
>gi|291407691|ref|XP_002720154.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 3
[Oryctolagus cuniculus]
Length = 227
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/233 (65%), Positives = 182/233 (78%), Gaps = 7/233 (3%)
Query: 38 SRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNE 97
+RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYPAGFMDV+SI KT E
Sbjct: 2 ARECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGE 61
Query: 98 NFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 157
NFRL+YDTKGRF +H I EEAK +KLCKVR + G KGIP++ T+D RTIRYP
Sbjct: 62 NFRLIYDTKGRFAVHRITPEEAK-------YKLCKVRKIFVGTKGIPHLVTHDARTIRYP 114
Query: 158 DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
DPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 115 DPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV 174
Query: 218 QDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A S+
Sbjct: 175 KDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG 227
>gi|440791779|gb|ELR13017.1| ribosomal family s4e, putative [Acanthamoeba castellanii str. Neff]
Length = 242
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/242 (63%), Positives = 189/242 (78%), Gaps = 7/242 (2%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTY 82
+GG +APKPS+GPHK REC PL+++LRNRLKYALT +EV +ILMQR V VD KVRTD T+
Sbjct: 1 MGGTWAPKPSAGPHKMRECFPLVILLRNRLKYALTKKEVTSILMQRLVKVDGKVRTDPTF 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKG 142
PAGF DV++I KT+E FRLLYDTKGRF H I EE+K +KL KVR V+ G+KG
Sbjct: 61 PAGFQDVITIEKTDEVFRLLYDTKGRFIAHRISAEESK-------YKLGKVRRVEIGKKG 113
Query: 143 IPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGII 202
IPY+ T+DGRTIRYPDP IK +DT+K+DLET KI + +KF+ GN+ MVT GRN GRVG++
Sbjct: 114 IPYLVTHDGRTIRYPDPSIKVHDTVKIDLETGKIVDHVKFEAGNLCMVTAGRNIGRVGLM 173
Query: 203 KNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 262
++RE+H GSF+ IH++DA G FATR NVF IG+ TK VSLPK KGIK SII+E + R
Sbjct: 174 ESRERHAGSFDIIHVKDAAGQTFATRGSNVFIIGQTTKSLVSLPKRKGIKTSIIQEQQHR 233
Query: 263 QA 264
A
Sbjct: 234 LA 235
>gi|430812711|emb|CCJ29887.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 259
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/266 (58%), Positives = 190/266 (71%), Gaps = 23/266 (8%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
M+DKLGG +AP+PS GPHK R+CLPLI+ LRNRLKYAL RE IAILMQR V VD KVRT
Sbjct: 1 MVDKLGGTYAPRPSPGPHKLRDCLPLIIFLRNRLKYALNNRETIAILMQRLVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI +T ENFRL+YDTKGR+ +H I EA +KLCK++ VQ
Sbjct: 61 DHTYPAGFMDVISIERTGENFRLVYDTKGRYMIHRITSMEA-------TYKLCKIKKVQL 113
Query: 139 GQKGIPYINTYDGRTI----------------RYPDPLIKANDTIKLDLETNKITEFIKF 182
G K IPY T+DGRTI RYP+P I ANDT+K DL +NKI I F
Sbjct: 114 GPKAIPYAVTHDGRTIVCIDQMLLIFLISFLQRYPNPDIHANDTVKFDLVSNKIDGHIPF 173
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW 242
+VG + MVTGGR++GRVG+I +RE H G F+ +HI+D+L H FATRL NVF IG + PW
Sbjct: 174 EVGKLAMVTGGRSKGRVGLIIDREHHNGGFDIVHIKDSLDHTFATRLSNVFVIGDISGPW 233
Query: 243 VSLPKGKGIKLSIIEEARKRQALATS 268
+SLPKGKG+KL+I EE +R+ L +
Sbjct: 234 ISLPKGKGLKLTISEERDRRRNLQNA 259
>gi|395748095|ref|XP_003778710.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Pongo abelii]
Length = 266
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/264 (57%), Positives = 185/264 (70%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKHLKR+ PKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT +
Sbjct: 1 MAWGPKKHLKRVAVPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDD 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D +VR TYPAGFMDV I KT E+F L+YDTKG F ++ I EEAK
Sbjct: 61 VKKICMQRFIKIDGEVRVAITYPAGFMDVTGIEKTGEHFCLVYDTKGCFAVYRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+ LCKVR V G KGIPY+ T+D TI Y DPLIK N+T+++DL T KI FI
Sbjct: 121 -------YNLCKVRKVTMGMKGIPYLVTHDTGTIHYADPLIKVNNTVQIDLGTGKIINFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF GNV MV GG + VG+ NRE+H GS +H++DA G+ A RL N+F G G+K
Sbjct: 174 KFHAGNVCMVIGGASLSHVGVTTNRERHPGSLSVVHVRDANGNSLALRLSNIFVTGNGSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
PW+SLP+ KG +L+I EE KR A
Sbjct: 234 PWISLPREKGTRLTIAEEGEKRLA 257
>gi|440466935|gb|ELQ36176.1| 40S ribosomal protein S4-A [Magnaporthe oryzae Y34]
gi|440478756|gb|ELQ59557.1| 40S ribosomal protein S4-A [Magnaporthe oryzae P131]
Length = 280
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/285 (56%), Positives = 197/285 (69%), Gaps = 32/285 (11%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KRL AP HW+LDKL G +APKPS GPHK RECLPLI+ +RNRLKYAL RE
Sbjct: 1 MGRGPKKHQKRLAAPSHWLLDKLSGTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA- 119
AILMQR V VD KVRTD TYPAGFMDVVSI KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 TKAILMQRLVKVDGKVRTDSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAE 120
Query: 120 --------KALI------------LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP 159
+AL+ LF++++ + +G+ G IRYPDP
Sbjct: 121 YKLGKPLDQALVDPQGPLGRPEPSDLFRYEVLGWKWDFWGRNGC----------IRYPDP 170
Query: 160 LIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQD 219
LIK NDT+K++L+T KIT+FIKFD G + MVT G N GRVG+I +RE+H G F +H++D
Sbjct: 171 LIKVNDTVKINLDTGKITDFIKFDTGALAMVTAGNNMGRVGVITHRERHDGGFNIVHLKD 230
Query: 220 ALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 264
A+ + F TR NVF IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 231 AIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKLTIAEERDRRRA 274
>gi|414884904|tpg|DAA60918.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 361
Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/223 (72%), Positives = 176/223 (78%), Gaps = 17/223 (7%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRLNAPKHWMLDKLGGAFAPKPSSG HKS+ECLPLILI+RNRLKYALTYREV
Sbjct: 141 ARGSKKHLKRLNAPKHWMLDKLGGAFAPKPSSGSHKSKECLPLILIIRNRLKYALTYREV 200
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPK----TNENFRLLYDTKGRFRLHSIRDE 117
I+ILMQ HVLVD KV TDKTYPAGFMD + T R+ G+F S
Sbjct: 201 ISILMQHHVLVDGKVTTDKTYPAGFMDKRELQAASVFTQSGMRM--PRLGQFSYTS---- 254
Query: 118 EAKALILLFQ---FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN 174
+LI+L + C VRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLETN
Sbjct: 255 ---SLIVLVEHDDLGSC-VRSVQFGQKGIPYLNTYDDRTILYPDPLIKANDTIKIDLETN 310
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
KI +FIKFDV NVVMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 311 KIMDFIKFDVDNVVMVTGKRNTGRVGVIKNREKHKGSFETIHV 353
>gi|71029346|ref|XP_764316.1| 40S ribosomal protein S4 [Theileria parva strain Muguga]
gi|68351270|gb|EAN32033.1| 40S ribosomal protein S4, putative [Theileria parva]
Length = 262
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/264 (57%), Positives = 194/264 (73%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH+KR+NAP HWMLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY E
Sbjct: 1 MGRGPKKHMKRINAPSHWMLDKLTGRYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR V VD KVRTD TYP GFMDVVS+ KTNE FR+LYDTKGRF H I DEEA
Sbjct: 61 VKLIVKQRLVKVDGKVRTDITYPTGFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ G K + T+DGRT R P +KA D++++++ T K+ EF+
Sbjct: 120 ------TYKLCRVKKTFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVSTGKVLEFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+VM+TGG N GRVG + ++EKH GSF+ +H++D+ + F+TR NVF IG GTK
Sbjct: 174 KFEPGNLVMITGGHNVGRVGTVVSKEKHPGSFDLVHVKDSQDNTFSTRSSNVFVIGVGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
+VSLP +G++ +IIE+ +R A
Sbjct: 234 SYVSLPYERGLRKTIIEQRNERLA 257
>gi|167379757|ref|XP_001735270.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165902828|gb|EDR28553.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 317
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/249 (60%), Positives = 180/249 (72%), Gaps = 7/249 (2%)
Query: 11 RLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHV 70
RLNAP HWML KLGG FAPKPS GPH +ECLPLILILRNRL YAL REV I+ R +
Sbjct: 2 RLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTI 61
Query: 71 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKL 130
+D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK FKL
Sbjct: 62 KIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK-------FKL 114
Query: 131 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 190
CK+ G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+
Sbjct: 115 CKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMM 174
Query: 191 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 250
GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+ V+LP KG
Sbjct: 175 IGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKG 234
Query: 251 IKLSIIEEA 259
IK ++++
Sbjct: 235 IKKPLLQQV 243
>gi|414884607|tpg|DAA60621.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 361
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 156/216 (72%), Positives = 173/216 (80%), Gaps = 26/216 (12%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLN PKHWMLDKLG AFAPKPSSGPHKSRECLPLILI+RN LK ALTYREV
Sbjct: 164 ARGLKKHLKRLNVPKHWMLDKLGRAFAPKPSSGPHKSRECLPLILIIRNMLKSALTYREV 223
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ILMQRHVLVD K+ ++P S+ +T T G FRL+ I+DE+AK
Sbjct: 224 ISILMQRHVLVDGKM----SFP-------SLRQTR--------TTGCFRLYPIKDEDAK- 263
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
F LCKVR +QFGQKGIPY+NTYD RTIRYPDPLIKANDTI +DLETNKI +FIK
Sbjct: 264 ------FMLCKVRPIQFGQKGIPYMNTYDDRTIRYPDPLIKANDTITIDLETNKIMDFIK 317
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
FDVGNV+MVTGGRN GRVG+IKNREKHK SFETIH+
Sbjct: 318 FDVGNVIMVTGGRNTGRVGVIKNREKHKSSFETIHV 353
>gi|403223747|dbj|BAM41877.1| 40S ribosomal protein S4 [Theileria orientalis strain Shintoku]
Length = 261
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 156/269 (57%), Positives = 194/269 (72%), Gaps = 9/269 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKR+NAP HWMLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY E
Sbjct: 1 MGRGPKKHLKRINAPSHWMLDKLTGRYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ QR V VD KVRTD TYP GFMDVVS+ +TNE FR+LYDTKGRF H I DEEA
Sbjct: 61 VKLIVKQRLVKVDGKVRTDMTYPTGFMDVVSLDRTNEKFRMLYDTKGRFCPHKITDEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLC+V+ G K + T+DGRT R P +KA D++++++ T KI E++
Sbjct: 120 ------TYKLCRVKKTFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVATGKILEYL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ GN+VMVTGG N GRVG + ++EKH GSF+ +H++D+ F TR NVF IG GTK
Sbjct: 174 KFEPGNLVMVTGGHNVGRVGTVVSKEKHPGSFDLVHVRDSNDSTFTTRSSNVFVIGVGTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSA 269
+VSLP +GI+ +IIE+ R LA SA
Sbjct: 234 SYVSLPAERGIRKTIIEQRNLR--LAKSA 260
>gi|183231631|ref|XP_001913602.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|169802405|gb|EDS89621.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 318
Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 152/259 (58%), Positives = 184/259 (71%), Gaps = 15/259 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG + HLKRLNAP HWML KLGG FAPKPS GPH +ECLPLILILRNRL YAL RE
Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+ R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK
Sbjct: 61 VTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++ G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+
Sbjct: 121 RVL---------------GTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFV 165
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+GN M+ GG GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+
Sbjct: 166 KFDIGNTAMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTE 225
Query: 241 PWVSLPKGKGIKLSIIEEA 259
V+LP KGIK ++++
Sbjct: 226 TLVNLPLDKGIKKPLLQQV 244
>gi|55982009|gb|AAV69397.1| 40S ribosomal protein S4 [Aedes aegypti]
Length = 270
Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 157/268 (58%), Positives = 194/268 (72%), Gaps = 11/268 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQRH+ +D KVRTD YPAGFMDV++I KTNENFRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRHIKIDGKVRTDPNYPAGFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +
Sbjct: 121 -------YKLLKVKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL-GNVFTIG-KG 238
KF+ GN M+TGGRN GR G + REKH GSFE +H++DA GH FATR VF +
Sbjct: 174 KFEPGNPCMITGGRNLGRCGTVIQREKHPGSFEIVHVKDATGHVFATRSEPTVFHHWVRA 233
Query: 239 TKPWVS-LPKGKGI-KLSIIEEARKRQA 264
T+ + S PKG+G+ +L + E QA
Sbjct: 234 TQGFSSRCPKGQGVSRLVHLAEGNAEQA 261
>gi|219110737|ref|XP_002177120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411655|gb|EEC51583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/256 (57%), Positives = 185/256 (72%), Gaps = 7/256 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAP HW L K+ G FAPKPS GPHK RECLP+ + LR+RLKYALT +E
Sbjct: 1 MPRGPKKHLKRLNAPSHWNLGKMTGVFAPKPSPGPHKERECLPICIALRDRLKYALTNKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ I M+R V VD KVRTD YP GFMDVV + K+ + FR+L+D+KGRF LH I EE+
Sbjct: 61 CMQICMERCVKVDGKVRTDHNYPTGFMDVVELEKSGDRFRILFDSKGRFVLHRINREES- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLC++ + G K IP T+DGRTIRYPDP K NDT+K+DL T K+++ I
Sbjct: 120 ------QYKLCRINKIYIGSKKIPVAVTHDGRTIRYPDPDAKVNDTVKVDLATGKMSDII 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF++G +V + GRN GRVG + + E+H SF+ + ++DA GH FATRL NVF IG GT
Sbjct: 174 KFELGAMVTLVRGRNAGRVGTLMHIERHLNSFDIVTVKDAKGHTFATRLHNVFVIGNGTT 233
Query: 241 PWVSLPKGKGIKLSII 256
P +SLPKG+GIK SII
Sbjct: 234 PQISLPKGRGIKKSII 249
>gi|296470845|tpg|DAA12960.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 233
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/240 (62%), Positives = 179/240 (74%), Gaps = 7/240 (2%)
Query: 31 PSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVV 90
PS+GPHK RECLP LRNRLKYALT EV I MQ + +D KVRTD TYPAGFMDV+
Sbjct: 1 PSTGPHKLRECLPXNHFLRNRLKYALTGDEVKKICMQXFIKIDGKVRTDITYPAGFMDVI 60
Query: 91 SIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYD 150
I KT ENF L+YDTKGRF +H I +EAK +KLCKVR + G KGIP++ T+D
Sbjct: 61 GIDKTGENFCLIYDTKGRFAVHRITPQEAK-------YKLCKVRKIFVGTKGIPHLVTHD 113
Query: 151 GRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKG 210
R IRYPDPLIK NDTI++DLET KI +FIKFD GN+ MVTGG N GR+G+I NRE+H G
Sbjct: 114 ARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNRERHLG 173
Query: 211 SFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
SF+ +H++DA G+ FAT L N+F IGKG KPW+SLP+GKGI+L+I EE KR A S+
Sbjct: 174 SFDVVHVKDANGNSFATWLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG 233
>gi|328866983|gb|EGG15366.1| 40S ribosomal protein S4 [Dictyostelium fasciculatum]
Length = 266
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/257 (58%), Positives = 183/257 (71%), Gaps = 7/257 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRL AP HWMLDKL G +AP+P GPHK RECLPLI+++RNRLKYALT +E
Sbjct: 3 ARGPKKHLKRLAAPAHWMLDKLAGKYAPRPRPGPHKLRECLPLIILIRNRLKYALTAQEC 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
+LMQR V ++ VRTD +P GFMDV++I KT ENFRLLYDTKG F+L I+ EAK
Sbjct: 63 TMVLMQRLVKINGVVRTDPKFPVGFMDVITIDKTKENFRLLYDTKGHFQLQRIQPSEAK- 121
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
F L +V V+ G GIPY++T DG T RYPDP I +DT+K+DLET KI I
Sbjct: 122 ------FILTRVTKVETGIHGIPYLHTEDGHTHRYPDPEIHRHDTVKVDLETGKIAAHIP 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
N+ M+ GG N GRVGII N EKH GSF+ +I D++GH FATRL NVF IG+G
Sbjct: 176 LATHNLCMIIGGHNTGRVGIINNIEKHPGSFDVAYITDSVGHSFATRLSNVFIIGQGQTT 235
Query: 242 WVSLPKGKGIKLSIIEE 258
+VSLP GKG++ S ++E
Sbjct: 236 FVSLPAGKGVRRSAVDE 252
>gi|388853330|emb|CCF52950.1| probable ribosomal protein S4.e, cytosolic [Ustilago hordei]
Length = 246
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 146/250 (58%), Positives = 186/250 (74%), Gaps = 9/250 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS+GPHK RE LPL+++LRNRLKYALT REV AI QR + +D KVRT
Sbjct: 1 MLDKLSGTYAPRPSNGPHKLREALPLVILLRNRLKYALTGREVNAITAQRLIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYP GF DVVSI K+ E+FR+LYD KGRF +H I EEA +KL KV+ VQ
Sbjct: 61 DPTYPTGFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEA-------TYKLLKVKKVQL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G +G+P+I T+DGRTIRYPDP IK NDT++ D+++ KI +F+ FD G VMVTGGRN+GR
Sbjct: 114 GARGVPHIVTHDGRTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGATVMVTGGRNQGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
G+I +E+H G F+ +HI+D LG +F+TRLGNVF IG KP +S+P+G G+ L+I EE
Sbjct: 174 AGVIVGKERHLGGFDIVHIRDVLGRDFSTRLGNVFVIGSEGKPMISMPRGGGVALTITEE 233
Query: 259 --ARKRQALA 266
R+RQ A
Sbjct: 234 RDQRRRQKEA 243
>gi|223996813|ref|XP_002288080.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
gi|220977196|gb|EED95523.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
Length = 261
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 144/264 (54%), Positives = 192/264 (72%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+HW L K+GG +APKPS+GPHK RECLP+ +ILR RLKYALT +E
Sbjct: 1 MARGPKKHLKRLNAPRHWNLGKMGGVWAPKPSAGPHKQRECLPVAIILRERLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I M+R V +D KVRTD YPAGFMDVV + K+ + FRLLYDTKGRF LH I+ +EA
Sbjct: 61 CQQICMERCVKIDGKVRTDHNYPAGFMDVVELEKSGDRFRLLYDTKGRFVLHRIQKDEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLC+++ K +P T+DGRT+R+PDP + NDT+K+++ T K+++
Sbjct: 120 ------EYKLCRIQKGYMSAKKVPVAVTHDGRTLRFPDPDVAVNDTVKVNIATGKMSDIY 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF++G ++MVT G N GRVG +++ EKH GSF + I+D G+ FATR NVF IG G
Sbjct: 174 KFEIGAMIMVTKGHNAGRVGTLEHVEKHDGSFSIVTIKDKKGNTFATRQANVFVIGSGDH 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
P V+LPKG+GIK +I++E + +A
Sbjct: 234 PQVTLPKGRGIKKTILQERAEAEA 257
>gi|444721029|gb|ELW61786.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 219
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 170/213 (79%), Gaps = 7/213 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQWFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLKTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 213
KFD GN+ MVTGG N GR+G+I NRE+H GSFE
Sbjct: 174 KFDTGNLCMVTGGANLGRIGVITNRERHPGSFE 206
>gi|159114046|ref|XP_001707248.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
gi|157435352|gb|EDO79574.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
Length = 268
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 191/262 (72%), Gaps = 8/262 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG++KHLKRLNAPKHW+LDK+GG +AP+P++GPH REC+PLILILRNRL YA TY E
Sbjct: 1 MARGVRKHLKRLNAPKHWLLDKMGGIWAPRPTNGPHGLRECIPLILILRNRLHYANTYAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
IL ++VL+D K RTD T+P GFMDV IPK ++ FR+LYD KGRF L I+ EA
Sbjct: 61 TSMILQDKNVLIDGKPRTDPTFPVGFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLC+V+ + G KG+PY++T+D RTIR+P P IK NDTIK++L+T KI E+
Sbjct: 120 ------GFKLCRVQKIFLGDKGMPYLSTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWY 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+G +VMVTGGRN GR+G I+ +KH GS+ I ++D G EF TRL NVF IG +
Sbjct: 174 KFDIGKIVMVTGGRNCGRIGTIQAIDKHMGSYTMIRMKDTEGTEFLTRLCNVFVIGNDS- 232
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P V++P KGI+ II+ R
Sbjct: 233 PAVAIPTTKGIRPDIIKNRELR 254
>gi|308161402|gb|EFO63851.1| Ribosomal protein S4 [Giardia lamblia P15]
Length = 268
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 191/262 (72%), Gaps = 8/262 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG++KHLKRLNAPKHW+LDK+GG +AP+P++GPH REC+PL+LILRNRL YA TY E
Sbjct: 1 MARGVRKHLKRLNAPKHWLLDKMGGIWAPRPTNGPHGLRECIPLVLILRNRLHYANTYAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
IL ++VL+D K RTD T+P GFMDV IPK ++ FR+LYD KGRF L I+ EA
Sbjct: 61 TSMILQDKNVLIDGKPRTDPTFPIGFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLC+V+ + G KG+PY++T+D RTIR+P P IK NDTIK++L+T KI E+
Sbjct: 120 ------GFKLCRVQKIFLGDKGMPYLSTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWY 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+G +VMVTGGRN GR+G I+ +KH GS+ I ++D G EF TRL NVF IG +
Sbjct: 174 KFDIGKIVMVTGGRNCGRIGTIQAIDKHMGSYTMIRMKDTEGTEFLTRLCNVFVIGNDS- 232
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P V++P KGI+ II+ R
Sbjct: 233 PAVAIPPTKGIRPDIIKNRELR 254
>gi|258597201|ref|XP_001347741.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
gi|254832593|gb|AAN35654.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
Length = 261
Score = 302 bits (774), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 147/262 (56%), Positives = 193/262 (73%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +G+KKHLKR+NAP HWML+K+GG +APK SSGPHK E +PL+++LRNRLKYALT+ E
Sbjct: 1 MGKGIKKHLKRVNAPSHWMLNKMGGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL+Q+ V VD KVRTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K
Sbjct: 61 VKMILIQKIVKVDNKVRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + + + T+DGR+I Y P +K NDT++LDLET K+ E +
Sbjct: 121 -------YKLCKVKKILLRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF VG++VMVT G + GRVG+I + +K+ G+++ IH++D+ FATRL NVF IG TK
Sbjct: 174 KFQVGSLVMVTAGHSVGRVGVISSIDKNMGTYDIIHVKDSRNKVFATRLSNVFVIGDNTK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P++SLP+ KGIKL IIEE R R
Sbjct: 234 PYISLPREKGIKLDIIEERRNR 255
>gi|393912410|gb|EJD76721.1| 40S ribosomal protein S4, variant [Loa loa]
Length = 222
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 171/229 (74%), Gaps = 7/229 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG K+HLKRL APKHWMLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E
Sbjct: 1 MARGPKRHLKRLAAPKHWMLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I QR + VD KVRTD +PAGFMDV+ I +TNE FRLLYD KGR+ H I ++E
Sbjct: 61 ARMICKQRLIKVDGKVRTDMRFPAGFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ T K+++++
Sbjct: 120 ------NFKLCKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIMVDIATGKMSDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL 229
KFD GN+ MVTGGRN GRVGI+ +REKH GSF+ +HI+DA GH FATR
Sbjct: 174 KFDQGNLCMVTGGRNMGRVGIVGHREKHPGSFDIVHIKDAAGHSFATRF 222
>gi|412985609|emb|CCO19055.1| 40S ribosomal protein S4 [Bathycoccus prasinos]
Length = 276
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 7/229 (3%)
Query: 35 PHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPK 94
PHKSRECLPL LILRNRLKYAL Y+EV IL QR V VD K+R +K YP G MDVV I K
Sbjct: 53 PHKSRECLPLCLILRNRLKYALNYKEVTTILQQRLVKVDGKIRMEKCYPCGIMDVVDIEK 112
Query: 95 TNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTI 154
T+E+FRL+YD KGRF +H I EA Q+KLCKV + G KG+P + +D RTI
Sbjct: 113 TDEHFRLMYDQKGRFVVHRITGIEA-------QYKLCKVIKKKLGDKGVPCVQLHDSRTI 165
Query: 155 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 214
RYPDP+IK D++ +D+ +NKIT+F+KFD G + MVTGGRN GRVGI+ REKHKGSFE
Sbjct: 166 RYPDPMIKEGDSVMVDIASNKITDFVKFDAGALCMVTGGRNAGRVGIVNRREKHKGSFEV 225
Query: 215 IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQ 263
+H+ DA G FATR NVF IG G KP VSLPKGKGIKL+I+EE RK++
Sbjct: 226 VHLTDAAGQNFATRFSNVFAIGTGNKPMVSLPKGKGIKLTILEEQRKQE 274
>gi|397590955|gb|EJK55222.1| hypothetical protein THAOC_25064 [Thalassiosira oceanica]
Length = 261
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/264 (55%), Positives = 192/264 (72%), Gaps = 7/264 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAP+HW L K+GG +APKPS+GPHK RECLP+ +ILR RLKYALT +E
Sbjct: 1 MGRGPKKHLKRLNAPRHWNLGKMGGVWAPKPSAGPHKQRECLPVAIILRERLKYALTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I M+R V +D KVRTD YPAGFMD+V + K+ + FRLLYDTKGRF LH + +EA
Sbjct: 61 CQQICMERCVKIDGKVRTDYNYPAGFMDIVELEKSGDIFRLLYDTKGRFVLHRVDKKEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++KLC+++ V K IP T+DGRT+R+PDP +K NDT+K+++ T K+ E
Sbjct: 120 ------EWKLCRIQKVYVTAKKIPVAVTHDGRTLRFPDPNVKVNDTVKVNIATGKMGEIF 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
F++G+VVMVT G N GRVGI+++ EKH GSF + ++D G+ FATR NVF IG G +
Sbjct: 174 PFEMGSVVMVTKGHNAGRVGILQHLEKHDGSFSIVTVKDKKGNVFATRQSNVFIIGAGER 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQA 264
+SLPKG+GIK +II+E + +A
Sbjct: 234 VELSLPKGRGIKKNIIQERAEAEA 257
>gi|209879451|ref|XP_002141166.1| 40S ribosomal protein S4 [Cryptosporidium muris RN66]
gi|209556772|gb|EEA06817.1| 40S ribosomal protein S4, putative [Cryptosporidium muris RN66]
Length = 261
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 190/258 (73%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ AP +WMLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY+E
Sbjct: 1 MARGPKKHLKRVAAPSNWMLDKLTGIYAPRPSSGPHKLRECIPLAILLRNRLKFALTYQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD KVRTD +P G MDV++I + N+N R++YDTKGRF + +EA
Sbjct: 61 VKYIVMQRLIKVDGKVRTDTCFPLGLMDVITIDRINKNMRIMYDTKGRFVPVQVSSKEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
Q+KLCKV V G KG+P T D RT+RY P I+ANDT+K+DLET K+ EFI
Sbjct: 120 ------QYKLCKVTRVALGPKGVPTATTNDARTLRYIHPEIRANDTVKIDLETGKVMEFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
K +VGN+ VTGGR++GRVG+I + E+ +G+ + ++D GH FAT + N+F +G+G K
Sbjct: 174 KCEVGNLCTVTGGRSQGRVGVITHLERKQGAQCIVSVRDKKGHTFATLIKNIFVLGEGDK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
V+LPK KGI+LS +E+
Sbjct: 234 SLVTLPKDKGIRLSNVED 251
>gi|443916876|gb|ELU37810.1| 40s ribosomal protein s4 [Rhizoctonia solani AG-1 IA]
Length = 331
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/228 (62%), Positives = 172/228 (75%), Gaps = 7/228 (3%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
AP+PS GPHK RE LPL + LRNRLKYALT REV I+ QR + VD KVRTD TYP G+M
Sbjct: 96 APRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTTIVAQRLIKVDGKVRTDNTYPTGYM 155
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+SI K+ E+FRLLYD KGRF +H I EEA +KL KVR G +G+PYI
Sbjct: 156 DVISIEKSGEHFRLLYDVKGRFVIHRITPEEA-------TYKLLKVRKTAVGARGVPYIV 208
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+DGRTIRYPDP IK NDT+K D+ T KITEF+KFD GN+VM+TGGRN GRVG I +RE+
Sbjct: 209 THDGRTIRYPDPQIKVNDTVKFDITTGKITEFVKFDTGNLVMITGGRNMGRVGTITHRER 268
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 255
H G F+ +H++D L FATR+ N+F IG+G+K W+SLPKGKG KL+I
Sbjct: 269 HVGGFDIVHVKDVLDRTFATRISNIFVIGEGSKAWISLPKGKGTKLTI 316
>gi|84997205|ref|XP_953324.1| 40s ribosomal protein s4 [Theileria annulata strain Ankara]
gi|65304320|emb|CAI76699.1| 40s ribosomal protein s4, putative [Theileria annulata]
Length = 254
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/256 (56%), Positives = 187/256 (73%), Gaps = 7/256 (2%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68
+KR+NAP HWMLDKL G +APK S GPHKSRECLPL+++LRNRLKYALTY EV I+ QR
Sbjct: 1 MKRINAPSHWMLDKLTGKYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDEVKLIVKQR 60
Query: 69 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQF 128
V VD KVRTD TYP GFMDVVS+ KTNE FR+LYDTKGRF H I DEEA +
Sbjct: 61 LVKVDGKVRTDITYPTGFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEA-------TY 113
Query: 129 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 188
KLC+V+ G K + T+DGRT R P +KA D++++++ T K+ EF+KF+ GN+V
Sbjct: 114 KLCRVKKTFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNLV 173
Query: 189 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 248
M+TGG N GRVG + ++EKH GSF+ +H++D+ F+TR NVF IG GTK +VSLP
Sbjct: 174 MITGGHNVGRVGTVVSKEKHPGSFDLVHVKDSQDSTFSTRSTNVFVIGVGTKSYVSLPAE 233
Query: 249 KGIKLSIIEEARKRQA 264
+G++ +IIE+ +R A
Sbjct: 234 RGLRKTIIEQRNERLA 249
>gi|324508881|gb|ADY43745.1| 40S ribosomal protein S4 [Ascaris suum]
Length = 221
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/228 (61%), Positives = 172/228 (75%), Gaps = 7/228 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG K+HLKRL AP HWMLDKLGG FAP+P+SGPHK RE LPLIL LRNRLKYAL+Y E
Sbjct: 1 MARGPKRHLKRLAAPHHWMLDKLGGVFAPRPTSGPHKLRESLPLILFLRNRLKYALSYNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I QR + +D KVRT+ +PAGFMDV++I KTNE FRLLYD KGR+ +H I + E +
Sbjct: 61 ARMICKQRLIKIDGKVRTEMRFPAGFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGR 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV G KG+P+I T+D RTIRYPDP +K NDTI LD+ + K +++
Sbjct: 121 -------FKLCKVVKKSVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVLDIASGKFNDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 228
KFD GN+ MVTGGRN GRVG++ +REKH GSF+ +H++DA GH FATR
Sbjct: 174 KFDQGNLCMVTGGRNMGRVGVVGHREKHPGSFDIVHVKDAAGHTFATR 221
>gi|160331849|ref|XP_001712631.1| rps4 [Hemiselmis andersenii]
gi|159766080|gb|ABW98306.1| rps4 [Hemiselmis andersenii]
Length = 250
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/252 (58%), Positives = 181/252 (71%), Gaps = 7/252 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G+KKHLKRL APK W L KLGG +AP P SGPHK E PLILILRNRLKYAL +E
Sbjct: 1 MAHGIKKHLKRLRAPKRWKLTKLGGIWAPNPKSGPHKKFESFPLILILRNRLKYALNNQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ IL QR + VD K+RT+K YPAG MD++SI KT ENFRLL DT GRF LH I ++E+
Sbjct: 61 AVQILQQRSIKVDKKIRTEKNYPAGLMDIISIEKTEENFRLLVDTFGRFILHRIEEKES- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV GQ+GIPYI T+DGRTIR+PDP IK NDTI DL KI +FI
Sbjct: 120 ------MFKLCKVTKSTKGQRGIPYIVTHDGRTIRFPDPFIKTNDTILFDLSEKKIIDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VG++ ++TGG N GR+GI+ + K+ E I ++DA G EF+T+ +F IGKG K
Sbjct: 174 KFEVGSLCIITGGPNVGRIGIVLQQGKNFLEEEMIKLKDAKGSEFSTKFSFIFVIGKGKK 233
Query: 241 PWVSLPKGKGIK 252
++SLPKGKGI+
Sbjct: 234 SFISLPKGKGIR 245
>gi|160550143|gb|ABX44776.1| putative 40S ribosomal protein RPS4 [Flustra foliacea]
Length = 214
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/221 (65%), Positives = 171/221 (77%), Gaps = 7/221 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPKHWMLDKL G FAP+PSSGPHK RE LP+IL +RNRLKYALTY E
Sbjct: 1 MARGPKKHLKRLNAPKHWMLDKLSGVFAPRPSSGPHKLRESLPIILFIRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I+MQR + VD KVRTD T+PAGFMDV+SI KT+ENFRL+YD KGRF +H I EEA
Sbjct: 61 AKKIVMQRLIKVDNKVRTDLTFPAGFMDVISIEKTSENFRLIYDVKGRFAIHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV G KG+PY+ T+DGRTIRYPDPL+K NDTI+++ +T KI +FI
Sbjct: 120 ------TYKLCKVAKQCTGPKGVPYVTTHDGRTIRYPDPLVKVNDTIQVNTQTGKIMDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 221
KF+ GN+ M+TGG N GRVG I + EKH GSF H++DAL
Sbjct: 174 KFEGGNMCMITGGHNIGRVGQIVHVEKHPGSFHIGHVKDAL 214
>gi|221055832|ref|XP_002259054.1| ribosomal protein s4 [Plasmodium knowlesi strain H]
gi|193809125|emb|CAQ39827.1| ribosomal protein s4, putative [Plasmodium knowlesi strain H]
Length = 261
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 194/262 (74%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +G+KKH+KR+NAP HWML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ E
Sbjct: 1 MGKGIKKHMKRVNAPSHWMLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K
Sbjct: 61 VKMILIQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + + + T+DGR+I Y P +K NDT++LDLET K+ E +
Sbjct: 121 -------YKLCKVKKIILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF +G++VMVT G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG +K
Sbjct: 174 KFQIGSMVMVTAGHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P++SLP+ KGIKL IIEE R +
Sbjct: 234 PYISLPREKGIKLDIIEERRNK 255
>gi|290983375|ref|XP_002674404.1| predicted protein [Naegleria gruberi]
gi|284087994|gb|EFC41660.1| predicted protein [Naegleria gruberi]
Length = 274
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/266 (57%), Positives = 196/266 (73%), Gaps = 7/266 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG +KH KR+ APKHWM+ KLGG +APKP G H +RE LPL+L+LRNRLKYA T +E
Sbjct: 1 MARGPRKHTKRIAAPKHWMMSKLGGVYAPKPKPGAHAARESLPLLLLLRNRLKYAATAKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL QR V VD VRTDK+YP+GF DV+SI KTNE+FRLL+DTKGRF +H I + EA
Sbjct: 61 VNVILKQRLVKVDGLVRTDKSYPSGFNDVISIDKTNEHFRLLFDTKGRFVIHPISEREA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV +G+PYI T DGR IR+PDP IK NDT+K+D+ET K+T+ +
Sbjct: 120 ------NYKLCKVTKRGTATQGVPYIQTNDGRLIRFPDPSIKVNDTVKVDIETGKVTKSV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
F+ GN+ MVTGG N+GR+G I NRE H GSFE +H++D G+ F TR NVF +G+G
Sbjct: 174 HFESGNLCMVTGGHNQGRIGEIVNRELHPGSFEIVHVKDIAGNNFTTRANNVFVLGQGHS 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALA 266
++LPKGKG+KL+++E+ +K+ LA
Sbjct: 234 SMITLPKGKGLKLNVVEDRKKQMRLA 259
>gi|156098302|ref|XP_001615183.1| 40S ribosomal protein S4 [Plasmodium vivax Sal-1]
gi|148804057|gb|EDL45456.1| 40S ribosomal protein S4, putative [Plasmodium vivax]
Length = 261
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 194/262 (74%), Gaps = 7/262 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +G+KKH+KR+NAP HWML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ E
Sbjct: 1 MGKGIKKHMKRVNAPSHWMLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K
Sbjct: 61 VKMILIQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKV+ + + + T+DGR+I Y P +K NDT++LDLET K+ E +
Sbjct: 121 -------YKLCKVKKMILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF +G++VMVT G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG +K
Sbjct: 174 KFQIGSMVMVTAGHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSK 233
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P++SLP+ KGIKL IIEE R +
Sbjct: 234 PYISLPREKGIKLDIIEERRNK 255
>gi|56199522|gb|AAV84250.1| ribosomal protein S4 [Culicoides sonorensis]
Length = 211
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 169/217 (77%), Gaps = 7/217 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRL+APK WMLDKLGG FAP+PS GPH+ RE LPL++ LRNRLKYALT EV
Sbjct: 1 ARGPKKHLKRLHAPKAWMLDKLGGVFAPRPSQGPHRLRESLPLVIFLRNRLKYALTNSEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+MQR + VD KVRTD +PAGFMDV++I KTNE FRL+YD KGRF +H I EEAK
Sbjct: 61 TKIVMQRLIKVDGKVRTDSNFPAGFMDVITIEKTNEYFRLIYDVKGRFTVHRISAEEAK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ G K +PY+ T+DGRTIR+PDPLIK NDT++LD+ T KIT+ IK
Sbjct: 120 ------YKLCKVKKTCVGPKKVPYLITHDGRTIRFPDPLIKINDTVQLDIATGKITDTIK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 218
F+ GN+ M+TGGRN GRVG + NREKH GSFE +HIQ
Sbjct: 174 FESGNLCMITGGRNLGRVGTVMNREKHPGSFEIVHIQ 210
>gi|253741437|gb|EES98307.1| Ribosomal protein S4 [Giardia intestinalis ATCC 50581]
Length = 267
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 189/262 (72%), Gaps = 8/262 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG +KHLKRLNAPKHW+LDK+GG +AP+P++GPH REC+PLILILRNRL YA TY E
Sbjct: 1 MARGPRKHLKRLNAPKHWLLDKMGGIWAPRPTNGPHGLRECIPLILILRNRLHYANTYAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
IL ++VL+D K R D T+P GFMDV IPK ++ FR+LYD KGRF L I+ EA
Sbjct: 61 TNMILKDKNVLIDNKPRIDPTFPIGFMDVFEIPKVHKVFRVLYDVKGRFTLIPIQSNEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLC+V+ + G KG+PY+ T+D RTIR+P P IK NDTIK++L+T KI E+
Sbjct: 120 ------GFKLCRVQKIFLGDKGMPYLVTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWY 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+G VVMVTGGRN GR+G I+ +KH GS+ I ++D+ G EF TRL NVF IG +
Sbjct: 174 KFDIGKVVMVTGGRNCGRIGTIQAIDKHMGSYTMIRMKDSEGAEFITRLCNVFIIGNDS- 232
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
P V++P KGI+ II+ R
Sbjct: 233 PAVTVPSTKGIRPDIIKNRELR 254
>gi|70946979|ref|XP_743149.1| ribosomal protein S4 [Plasmodium chabaudi chabaudi]
gi|56522509|emb|CAH81099.1| ribosomal protein S4, putative [Plasmodium chabaudi chabaudi]
Length = 266
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/261 (55%), Positives = 190/261 (72%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
+G+KKH+KR+NAP HWML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV
Sbjct: 7 GKGIKKHMKRVNAPSHWMLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEV 66
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL+Q+ V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K
Sbjct: 67 KMILIQKIVKVDNKTRTDCTFPVGLMDVIHITKSNEYFRLLYDVKGRFVPHRITNEESK- 125
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ + + + T+DGR+I Y P +K NDTI+LDLE+ K+ E +K
Sbjct: 126 ------YKLCKVKKIILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLESGKVLEHLK 179
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F VGN+VMVT G + GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG TKP
Sbjct: 180 FQVGNMVMVTAGHSVGRVGTILSIDKNIGTYDIIHVKDSRGKVFATRLSNIFVIGDATKP 239
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
++SLP+ KGIKL IIEE R R
Sbjct: 240 YISLPREKGIKLDIIEERRNR 260
>gi|389583604|dbj|GAB66338.1| 40S ribosomal protein S4, partial [Plasmodium cynomolgi strain B]
Length = 260
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/261 (54%), Positives = 193/261 (73%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
+G+KKH+KR+NAP HWML+K+GG +APK SSGPH+ E +PL+++LRNRLKYALT+ EV
Sbjct: 1 GKGIKKHMKRVNAPSHWMLNKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K
Sbjct: 61 KMILIQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ + + + T+DGR+I Y P +K NDT++LDLET K+ E +K
Sbjct: 120 ------YKLCKVKKMILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F +G++VMVT G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG +KP
Sbjct: 174 FQIGSMVMVTAGHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKP 233
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
++SLP+ KGIKL IIEE R +
Sbjct: 234 YISLPREKGIKLDIIEERRNK 254
>gi|296470835|tpg|DAA12950.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 223
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/230 (62%), Positives = 172/230 (74%), Gaps = 7/230 (3%)
Query: 41 CLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFR 100
CLPLI LRNRLKYALT EV I MQ + +D KVRTD TYPAGFMDV+ I KT ENFR
Sbjct: 1 CLPLITFLRNRLKYALTGDEVKKIGMQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFR 60
Query: 101 LLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 160
L+YDTKGRF +H I +EAK +KLCKVR + G KGIP++ T+D R IRYPDPL
Sbjct: 61 LIYDTKGRFAVHRITPQEAK-------YKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPL 113
Query: 161 IKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDA 220
IK NDTI+ DLET KIT+FIKFD GN+ VTGG N GR+G+I NRE+H GSF+ +H++DA
Sbjct: 114 IKVNDTIQTDLETGKITDFIKFDTGNLCKVTGGANLGRIGVISNRERHPGSFDVVHVKDA 173
Query: 221 LGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
G+ FAT L N+F IGKG KPW+SLP+GKGI+L+I EE KR A S+
Sbjct: 174 NGNSFATWLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG 223
>gi|444729526|gb|ELW69939.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 248
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 171/221 (77%), Gaps = 7/221 (3%)
Query: 50 NRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRF 109
NRLKYALT EV I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF
Sbjct: 35 NRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRF 94
Query: 110 RLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKL 169
+H I EEAK +KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++
Sbjct: 95 AVHRITPEEAK-------YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQI 147
Query: 170 DLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL 229
DLET KI++FIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL
Sbjct: 148 DLETGKISDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRL 207
Query: 230 GNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
N+F IGKG KPW+SLP+GKGI+L+I EE KR A S+
Sbjct: 208 SNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG 248
>gi|407918333|gb|EKG11604.1| Ribosomal protein S4e [Macrophomina phaseolina MS6]
Length = 221
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 175/228 (76%), Gaps = 8/228 (3%)
Query: 42 LPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRL 101
+PLI+ +RNRLKYAL RE AI+MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL
Sbjct: 1 MPLIVFIRNRLKYALNGRETKAIMMQRLVKVDGKVRTDVTYPAGFMDVISIEKTGENFRL 60
Query: 102 LYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI 161
+YDTKGRF +H I EEA ++KL KVR VQ G+ GIP++ T+D RTIRYPDPLI
Sbjct: 61 VYDTKGRFTVHRITAEEA-------EYKLGKVRRVQLGKGGIPFLVTHDARTIRYPDPLI 113
Query: 162 KANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 221
K NDT+K+DL T KIT+FIKFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+
Sbjct: 114 KVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAV 173
Query: 222 GHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSA 269
+EFATR NVF IG+ KPW+SLPKGKG+KLSI EE +R+A A +
Sbjct: 174 DNEFATRESNVFIIGR-EKPWISLPKGKGVKLSIAEERDRRRAYALAG 220
>gi|68073433|ref|XP_678631.1| ribosomal protein S4 [Plasmodium berghei strain ANKA]
gi|56499160|emb|CAI00409.1| ribosomal protein S4, putative [Plasmodium berghei]
Length = 260
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/261 (55%), Positives = 189/261 (72%), Gaps = 7/261 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
+G+KKH+KR+NAP HWML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV
Sbjct: 1 GKGIKKHMKRVNAPSHWMLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL+Q+ V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K
Sbjct: 61 KMILIQKIVKVDNKTRTDCTFPVGLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESK- 119
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
+KLCKV+ + + + T+DGR+I Y P +K NDTI+LDLET K+ E +K
Sbjct: 120 ------YKLCKVKKIILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLETGKVLEHLK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
F VGN+VMVT G + GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG KP
Sbjct: 174 FQVGNMVMVTAGHSVGRVGTILSIDKNIGTYDIIHVKDSRGKIFATRLSNIFVIGDALKP 233
Query: 242 WVSLPKGKGIKLSIIEEARKR 262
++SLP+ KGIKL IIEE R R
Sbjct: 234 YISLPREKGIKLDIIEERRNR 254
>gi|399949930|gb|AFP65586.1| 40S ribosomal protein S4 [Chroomonas mesostigmatica CCMP1168]
Length = 250
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/252 (56%), Positives = 187/252 (74%), Gaps = 7/252 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA+GLKKHLKRL APK+W L+KLGG +AP P SGPHK E P+ILILRN+LKYAL RE
Sbjct: 1 MAKGLKKHLKRLKAPKNWKLEKLGGIWAPSPQSGPHKKMESFPIILILRNKLKYALNNRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ IL +++V +D K+RT+K YP G MDV+S+ KTNENFRLLYDT GRF LH I +E+
Sbjct: 61 VLQILKKKNVKIDKKIRTEKNYPTGIMDVISLEKTNENFRLLYDTFGRFVLHRIEQKES- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCK+ + GQ+GIPYI T+DGRT R+PDP +K NDTI +L KI +FI
Sbjct: 120 ------FFKLCKIVKLTKGQRGIPYITTHDGRTCRFPDPFVKKNDTILFNLSEKKIIDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFDVG++ ++TGG N GR+GI+ +EK+ G E I ++D+ G EF +++ +F IGKG K
Sbjct: 174 KFDVGSLCLITGGNNIGRIGIVMQQEKNSGPAEMIRLKDSEGFEFFSKMSYIFVIGKGKK 233
Query: 241 PWVSLPKGKGIK 252
++SLPK KG++
Sbjct: 234 SFISLPKEKGLR 245
>gi|167393127|ref|XP_001740437.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165895490|gb|EDR23170.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 308
Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 143/241 (59%), Positives = 173/241 (71%), Gaps = 7/241 (2%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
ML KLGG FAPKPS GPH +ECLPLILILRNRL YAL REV I+ R + +D K+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK FKLCK+
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK-------FKLCKIEKRVL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG GR
Sbjct: 114 GTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+ V+LP KGIK ++++
Sbjct: 174 VGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQ 233
Query: 259 A 259
Sbjct: 234 V 234
>gi|319443378|pdb|2XZM|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443413|pdb|2XZN|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|315570299|tpg|DAA33968.1| TPA_exp: 40S ribosomal protein rpS4e [Tetrahymena thermophila]
Length = 260
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/265 (55%), Positives = 188/265 (70%), Gaps = 10/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+NAPK WML+KLGG +A +PS GPHK RE LPL ++L+ RL YAL R+
Sbjct: 1 MARGPKKHLKRINAPKSWMLNKLGGIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRD 60
Query: 61 VIAIL--MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
V IL +++V VD KVR DK YP G MDVV I KT+++FR+LYDTKGRF L S+ EE
Sbjct: 61 VTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEE 120
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
AK +KL KV + G IPYI T+D RTIR+P+P IK DT+K DL NKI
Sbjct: 121 AK-------YKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIEN 173
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
F + GNV + G N GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G
Sbjct: 174 FAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQG 233
Query: 239 TKPWVSLPKGKGIKLSIIEEARKRQ 263
K W+ LP G G++ +I+EE RKR+
Sbjct: 234 KKSWIELPSGDGVRETILEE-RKRK 257
>gi|340509077|gb|EGR34650.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 260
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/264 (53%), Positives = 186/264 (70%), Gaps = 9/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKR+ APK WM+ KLGG + +PS GPHK RE LPL ++L+NRL YAL R+
Sbjct: 1 MVRGPKKHLKRICAPKSWMISKLGGIWVTRPSQGPHKLRESLPLFVLLKNRLNYALNGRD 60
Query: 61 VIAIL--MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
V IL +++V VD K R D+++P G MDVVSIPKT+E FR+LYDTKGRF L ++ +E
Sbjct: 61 VTLILNDKEQNVFVDGKCRRDRSFPTGLMDVVSIPKTDEQFRVLYDTKGRFVLKTLNKQE 120
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
A QFKL KV+ G +PYI T+D RTIR+P+P IK DTIK D+ NKI E
Sbjct: 121 A-------QFKLLKVKGKAIGPNQVPYIVTHDSRTIRFPNPNIKIGDTIKYDIVKNKILE 173
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
F + GN+ V G N GRVG+I + EKH GSF+ +H++D G+ FATR+GN+F IG+G
Sbjct: 174 FAHLESGNICFVQNGNNIGRVGLITHIEKHPGSFDIVHVKDTKGNSFATRIGNIFVIGQG 233
Query: 239 TKPWVSLPKGKGIKLSIIEEARKR 262
KPWVSLP+G GI +++E+ +++
Sbjct: 234 KKPWVSLPEGDGIYETVMEQRQRK 257
>gi|323508791|dbj|BAJ77289.1| cgd7_4760 [Cryptosporidium parvum]
gi|323510165|dbj|BAJ77976.1| cgd7_4760 [Cryptosporidium parvum]
Length = 261
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/258 (55%), Positives = 183/258 (70%), Gaps = 7/258 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ AP +WMLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E
Sbjct: 1 MARGPKKHLKRVAAPSNWMLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I+MQR + VD KVRTD +P G MDVVSI + +N R++YDTKGRF I +EA
Sbjct: 61 AKYIVMQRLIKVDGKVRTDICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV V G KGIP T D RT+RY P +KANDT+K+DL T K+ +F+
Sbjct: 120 ------GFKLCKVTKVALGAKGIPTATTNDARTLRYIHPDVKANDTVKVDLATGKVIDFV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
K +VGN+ MVTGGR++GRVG I + E+ G+ + I+D G FAT + N+F IG+ K
Sbjct: 174 KCEVGNMCMVTGGRSQGRVGTITHFERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGK 233
Query: 241 PWVSLPKGKGIKLSIIEE 258
P V+LPK KGI+LS +E+
Sbjct: 234 PLVTLPKDKGIRLSNVED 251
>gi|340505756|gb|EGR32063.1| hypothetical protein IMG5_097290 [Ichthyophthirius multifiliis]
Length = 260
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/264 (53%), Positives = 187/264 (70%), Gaps = 9/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKR+ APK WM+ KLGG + +PS GPHK RE LPL ++L+NRL YAL R+
Sbjct: 1 MVRGPKKHLKRICAPKSWMVSKLGGIWVTRPSQGPHKLRESLPLFVLLKNRLNYALNGRD 60
Query: 61 VIAIL--MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
V IL +++V VD K R D+ +P G MDVV+IPKT+ENFR+LYDTKGRF L ++ +E
Sbjct: 61 VTLILNDKEQNVFVDGKCRRDRGFPTGLMDVVNIPKTDENFRVLYDTKGRFVLKTLNKQE 120
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
A QFKL KV+ G +PYI T+D RTIR+P+P IK DTIK DL NKI E
Sbjct: 121 A-------QFKLLKVKGKAIGPNQVPYIVTHDSRTIRFPNPNIKIGDTIKYDLVKNKILE 173
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
+ GN+ V G N GRVG+I + EKH GSF+ +H++D+ G+ FATR+GN+F IG+G
Sbjct: 174 HTHLESGNICFVQNGNNIGRVGLITHIEKHPGSFDIVHVKDSKGNSFATRIGNIFVIGQG 233
Query: 239 TKPWVSLPKGKGIKLSIIEEARKR 262
KPW+SLP+G+GI +++E+ +++
Sbjct: 234 KKPWISLPEGEGIYETVMEQRQRK 257
>gi|126654348|ref|XP_001388411.1| ribosomal protein S4 [Cryptosporidium parvum Iowa II]
gi|126117504|gb|EAZ51604.1| ribosomal protein S4, putative [Cryptosporidium parvum Iowa II]
Length = 260
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/257 (55%), Positives = 182/257 (70%), Gaps = 7/257 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+ AP +WMLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E
Sbjct: 1 ARGPKKHLKRVAAPSNWMLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEA 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+MQR + VD KVRTD +P G MDVVSI + +N R++YDTKGRF I +EA
Sbjct: 61 KYIVMQRLIKVDGKVRTDICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEA-- 118
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
FKLCKV V G KGIP T D RT+RY P +KANDT+K+DL T K+ +F+K
Sbjct: 119 -----GFKLCKVTKVALGAKGIPTATTNDARTLRYIHPDVKANDTVKVDLATGKVIDFVK 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
+VGN+ MVTGGR++GRVG I + E+ G+ + I+D G FAT + N+F IG+ KP
Sbjct: 174 CEVGNMCMVTGGRSQGRVGTITHFERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGKP 233
Query: 242 WVSLPKGKGIKLSIIEE 258
V+LPK KGI+LS +E+
Sbjct: 234 LVTLPKDKGIRLSNVED 250
>gi|281206604|gb|EFA80790.1| 40S ribosomal protein S4 [Polysphondylium pallidum PN500]
Length = 284
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/250 (57%), Positives = 181/250 (72%), Gaps = 11/250 (4%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68
LK L +P K+ AP+PS GP K +ECLPL +ILRNRLKYALT EV I+MQR
Sbjct: 30 LKTLFSPFRSSYQKM----APRPSPGPRKLKECLPLCIILRNRLKYALTRNEVTKIVMQR 85
Query: 69 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQF 128
V ++ VRTD +P GFMDVVSI KTNENFRLL+DTKGRF+L I+ EAK F
Sbjct: 86 LVKINGVVRTDVNFPVGFMDVVSIEKTNENFRLLFDTKGRFQLQRIQPNEAK-------F 138
Query: 129 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 188
L KV V+ G +GIPY++T +G T RYPDP IK +DT+K+DLET+KI F+ F++ N+
Sbjct: 139 ILTKVTKVETGLQGIPYLHTDNGHTYRYPDPAIKIHDTVKIDLETSKIVSFVPFELNNLC 198
Query: 189 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 248
M+TGG N GRVG+I NRE+H GSF+ +H+ D++GH FATRL NVF IGKG+ +VSL G
Sbjct: 199 MITGGHNLGRVGVITNRERHLGSFDIVHVTDSVGHSFATRLSNVFIIGKGSTTFVSLLAG 258
Query: 249 KGIKLSIIEE 258
KG+K S+I+E
Sbjct: 259 KGVKKSLIDE 268
>gi|265141272|gb|ACY74439.1| 40S ribosomal protein S4-like protein [Carukia barnesi]
Length = 227
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 176/232 (75%), Gaps = 7/232 (3%)
Query: 39 RECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNEN 98
RECLPLI+ LRNRLKYAL EV IL QR + VD KVRTD TYPAGFMDVV+I KT +N
Sbjct: 1 RECLPLIIFLRNRLKYALNGDEVKKILKQRLIKVDGKVRTDPTYPAGFMDVVTIEKTGDN 60
Query: 99 FRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD 158
FRLLYD KGRF H I EEA +KL KV+ G + +PY+ T+DGRTIRYPD
Sbjct: 61 FRLLYDVKGRFVCHRITPEEA-------VYKLGKVKRTGVGIRSVPYLVTHDGRTIRYPD 113
Query: 159 PLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 218
PL+K NDT+ +D+ T KIT+FIKFD GN VMV GGRN GR+GII +RE+H GS++ +HI+
Sbjct: 114 PLVKVNDTVIIDIRTGKITDFIKFDTGNAVMVIGGRNTGRIGIITHRERHPGSYDIVHIK 173
Query: 219 DALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
DA+G++FATRLGN+F IG+GTK +++P+GKGI+LSI EE +R A + ++
Sbjct: 174 DAVGNQFATRLGNIFIIGRGTKGMITVPRGKGIRLSIAEERDRRLAEKSKSS 225
>gi|82539137|ref|XP_723981.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii 17XNL]
gi|23478464|gb|EAA15546.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii]
Length = 253
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/254 (54%), Positives = 184/254 (72%), Gaps = 7/254 (2%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68
+KR+NAP HWML+K+ G +APK SSGPHK E +PL+++LRNRLKYALT+ EV IL+Q+
Sbjct: 1 MKRVNAPSHWMLNKMDGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQK 60
Query: 69 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQF 128
V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K +
Sbjct: 61 IVKVDNKTRTDCTFPVGLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESK-------Y 113
Query: 129 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 188
KLCK++ + + + T+DGR+I Y P +K NDTI+LDLE+ K+ E +KF VGN+V
Sbjct: 114 KLCKIKKIILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMV 173
Query: 189 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 248
MVT G + GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG TKP++SLP+
Sbjct: 174 MVTAGHSVGRVGTILSIDKNIGTYDIIHVKDSRGKVFATRLSNIFVIGDNTKPYISLPRE 233
Query: 249 KGIKLSIIEEARKR 262
KGIKL IIEE R R
Sbjct: 234 KGIKLDIIEERRNR 247
>gi|2500489|sp|P55832.1|RS4_HORSE RecName: Full=40S ribosomal protein S4
gi|4432936|dbj|BAA21075.1| ribosomal protein S4 [Macaca fuscata]
gi|4432938|dbj|BAA21077.1| ribosomal protein S4 [Felis catus]
gi|4432940|dbj|BAA21079.1| ribosomal protein S4 [Canis lupus familiaris]
gi|4432941|dbj|BAA21080.1| ribosomal protein S4 [Equus caballus]
gi|4432942|dbj|BAA21081.1| ribosomal protein S4 [Sus scrofa]
Length = 194
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 160/201 (79%), Gaps = 7/201 (3%)
Query: 20 LDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTD 79
LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD
Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 60
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFG 139
TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR + G
Sbjct: 61 ITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK-------YKLCKVRKIFVG 113
Query: 140 QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRV 199
KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+
Sbjct: 114 TKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRI 173
Query: 200 GIIKNREKHKGSFETIHIQDA 220
G+I NRE+H GSF+ +H++DA
Sbjct: 174 GVITNRERHPGSFDVVHVKDA 194
>gi|118573853|sp|P0C233.1|RS4_TETTH RecName: Full=40S ribosomal protein S4; AltName: Full=40S ribosomal
protein S7
gi|1096035|prf||2110340A ribosomal protein S7
Length = 259
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/264 (55%), Positives = 186/264 (70%), Gaps = 10/264 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKR+NAPK WML+KLGG +A +PS GPHK RE LPL ++L+ RL YAL R+V
Sbjct: 1 ARGPKKHLKRINAPKSWMLNKLGGIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRDV 60
Query: 62 IAILMQR--HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
IL + +V VD KVR DK YP G MDVV I KT+++FR+LYDTKGRF L S+ EEA
Sbjct: 61 TLILNDKEGNVFVDQKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
K +KL KV + G IPYI T+D RTIR+P+P IK DT+K DL NKI F
Sbjct: 121 K-------YKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENF 173
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
+ GNV + G N GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G
Sbjct: 174 AHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGK 233
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQ 263
K ++ LP G G++ +I+EE RKR+
Sbjct: 234 KLYIELPSGDGVRETILEE-RKRK 256
>gi|432089928|gb|ELK23579.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 210
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 143/252 (56%), Positives = 168/252 (66%), Gaps = 42/252 (16%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA
Sbjct: 61 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEA------------------- 101
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
K NDTI+ DLET KIT+FIKFD GN+ MVTGG N GR
Sbjct: 102 -----------------------KVNDTIQTDLETGKITDFIKFDTGNLCMVTGGANLGR 138
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 139 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 198
Query: 259 ARKRQALATSAA 270
KR A S+
Sbjct: 199 RDKRLAAKQSSG 210
>gi|403356345|gb|EJY77764.1| 40S ribosomal protein S4 [Oxytricha trifallax]
Length = 264
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 137/264 (51%), Positives = 186/264 (70%), Gaps = 9/264 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH KR+ AP HWML+KLGG +A + +GPHK RE +PL ++LRNRL+YA++ +E
Sbjct: 1 MARGPKKHQKRIAAPSHWMLNKLGGVYATRAGTGPHKRRESMPLSVLLRNRLRYAISRQE 60
Query: 61 VIAILMQRHVLV--DAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
I I+ + L+ D K+R D +P G MDVV+I +T E+FR+LYD KGR++ H I +E
Sbjct: 61 AIKIVKDKEGLIKIDGKIRRDPRFPLGIMDVVTIDRTGEHFRILYDVKGRYQAHKIDAKE 120
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
A QFKLC +R G +PY+ T+DGRT+R+P P IK +DT+KL+LETN++
Sbjct: 121 A-------QFKLCSIRRKAMGPNKVPYVITHDGRTLRFPHPDIKKHDTVKLNLETNEVES 173
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
IKF+ G V++ GG N GRVG++++ EKH SF+ HI+DA GH FATR+ NVF IG+G
Sbjct: 174 LIKFENGAQVLLVGGNNIGRVGVLQHIEKHPSSFDIAHIKDAAGHSFATRVNNVFVIGEG 233
Query: 239 TKPWVSLPKGKGIKLSIIEEARKR 262
K +SL KGIKLS+I+E KR
Sbjct: 234 KKSVISLLPAKGIKLSLIDERNKR 257
>gi|340546083|gb|AEK51840.1| X-linked ribosomal protein S4 [Heteronotia binoei]
Length = 193
Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 159/200 (79%), Gaps = 7/200 (3%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAK 75
KHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D K
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRS 135
VRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK +KLCKVR
Sbjct: 61 VRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAK-------YKLCKVRK 113
Query: 136 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 195
+ G KGIP++ T+D RTIRYPDPLIK NDTI+++LET KIT+FIKFD GN+ MVTGG N
Sbjct: 114 IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTGGAN 173
Query: 196 RGRVGIIKNREKHKGSFETI 215
GR+G+I NRE+H GSF+ +
Sbjct: 174 LGRIGVITNRERHPGSFDVV 193
>gi|413944948|gb|AFW77597.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 271
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 159/216 (73%), Gaps = 41/216 (18%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWML+KLG AFAPKPSSGPHKSRECLPLILI+RNRLKYALTYRE
Sbjct: 89 ARGLKKHLKRLNAPKHWMLNKLGRAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE- 147
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
M S+ +T T G FRLH IRDE+AK
Sbjct: 148 -------------------------MSFPSLRQTR--------TIGCFRLHPIRDEDAK- 173
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
F LCKV SVQFGQKGIPY+NTY RTIRYPDPLIKANDT K+DLETNKI +FIK
Sbjct: 174 ------FMLCKVGSVQFGQKGIPYLNTYGDRTIRYPDPLIKANDTNKIDLETNKIMDFIK 227
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
FDVGNVVMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 228 FDVGNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 263
>gi|4432939|dbj|BAA21078.1| ribosomal protein S4 [Bos taurus]
Length = 194
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 159/201 (79%), Gaps = 7/201 (3%)
Query: 20 LDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTD 79
LDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD
Sbjct: 1 LDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 60
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFG 139
TYPAGFMDV+SI K ENFRL+YDTKGRF +H I EEAK +KLCKVR + G
Sbjct: 61 VTYPAGFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAK-------YKLCKVRKIFVG 113
Query: 140 QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRV 199
KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+
Sbjct: 114 TKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRI 173
Query: 200 GIIKNREKHKGSFETIHIQDA 220
G+I NRE+H GSF+ +H++DA
Sbjct: 174 GVITNRERHPGSFDVVHVKDA 194
>gi|356565689|ref|XP_003551070.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
[Glycine max]
Length = 230
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/166 (80%), Positives = 148/166 (89%), Gaps = 7/166 (4%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
+ VSIPKTNEN RLLYDTKGRFRLHSIRD+EAK FKLCKVRSV FG KGIPY+N
Sbjct: 14 EAVSIPKTNENIRLLYDTKGRFRLHSIRDDEAK-------FKLCKVRSVXFGPKGIPYLN 66
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
TYDGRTI YPDPLI+ANDT+KLDLE +++ FIKFDVGNVVMVTGGRNRG VG+IKNREK
Sbjct: 67 TYDGRTIHYPDPLIRANDTVKLDLEKTRLSIFIKFDVGNVVMVTGGRNRGCVGVIKNREK 126
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 253
HKGSF+TIH+QDA GHEFA+R+GNVFTIGKGTKPW+SL KGKGIKL
Sbjct: 127 HKGSFKTIHVQDATGHEFASRMGNVFTIGKGTKPWISLAKGKGIKL 172
>gi|145528524|ref|XP_001450056.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417656|emb|CAK82659.1| unnamed protein product [Paramecium tetraurelia]
Length = 816
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/265 (51%), Positives = 186/265 (70%), Gaps = 9/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KR+ APK WML KLGG + +PS GPHK RE +PL +IL+ +LKYAL RE
Sbjct: 551 MARGPKKHMKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQQKLKYALYARE 610
Query: 61 VIAILMQR--HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
V IL + ++ VD KVR+D YP G DV++I KT E++R+LYD +G+F L SI+ +E
Sbjct: 611 VQMILADKDGNIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDE 670
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
AK FKL KV + G +PYI T D RTIRYP+P I NDT+K+DLET KI +
Sbjct: 671 AK-------FKLVKVTQKKVGPNNVPYIVTNDSRTIRYPNPEIHVNDTLKIDLETGKIVD 723
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
FIK + GN+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG
Sbjct: 724 FIKEEPGNICYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKG 783
Query: 239 TKPWVSLPKGKGIKLSIIEEARKRQ 263
K +SLP G+ L+ +E+ + R+
Sbjct: 784 KKSLISLPDDNGLYLTALEKKQARE 808
>gi|431891055|gb|ELK01933.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 452
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/254 (54%), Positives = 175/254 (68%), Gaps = 7/254 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKHL+ + APK WMLDKL G F P S+ PHK R LPLI+ RNRLKYA T E
Sbjct: 1 MACGPKKHLECIAAPKPWMLDKLTGVFPPCSSTSPHKLRGYLPLIIFSRNRLKYAKTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I +Q+ + +D+KV TD TYPAGFMDV+SI KT EN L+YD +G F +H I E+AK
Sbjct: 61 VKKICIQQFIKIDSKVWTDVTYPAGFMDVISIDKTRENLCLIYDIRGHFPIHQITPEKAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCK+R KGIP++ +D T+ YPDPLIK N TI++DL+T KIT+FI
Sbjct: 121 -------YKLCKMRKTFVSTKGIPHLVIHDACTMCYPDPLIKVNGTIRIDLQTGKITDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVT G N GR+G+I NRE H GSF+ ++++DA G FATRL N+ IGK K
Sbjct: 174 KFDTGNLCMVTVGDNLGRIGVITNRESHSGSFDVVNVKDANGDSFATRLSNICIIGKDNK 233
Query: 241 PWVSLPKGKGIKLS 254
PW+SLP K++
Sbjct: 234 PWLSLPGAHNGKVA 247
>gi|402697606|gb|AFQ90988.1| X-linked ribosomal protein S4, partial [Draco beccarii]
Length = 193
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 158/200 (79%), Gaps = 7/200 (3%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAK 75
KHWMLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +D K
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRS 135
VRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK +KLCKVR
Sbjct: 61 VRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAK-------YKLCKVRK 113
Query: 136 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 195
+ G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KITEFIKFD GN+ MVTGG N
Sbjct: 114 IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITEFIKFDTGNLCMVTGGAN 173
Query: 196 RGRVGIIKNREKHKGSFETI 215
GR+G+I NRE+H GSF+ +
Sbjct: 174 LGRIGVITNRERHPGSFDVV 193
>gi|260950591|ref|XP_002619592.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
gi|238847164|gb|EEQ36628.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
Length = 224
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 162/207 (78%), Gaps = 7/207 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQ HV VD KVRT
Sbjct: 1 MLDKLSGTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+++ TNENFRL+YD KGRF +H I EE +KL KV+ +
Sbjct: 61 DSTYPAGFMDVITLEATNENFRLVYDIKGRFTVHRITAEEG-------SYKLGKVKKIAL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G+K IPY+ T+DGRTIRYPDP I+ANDT+K+DL T KIT+FIKFD G +VMVTGG+N GR
Sbjct: 114 GKKAIPYVVTHDGRTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGKNLGR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEF 225
VG+I +REKH+G F+ +HI+DAL + F
Sbjct: 174 VGVIVHREKHEGGFDLVHIKDALDNTF 200
>gi|402697610|gb|AFQ90991.1| X-linked ribosomal protein S4, partial [Malaclemys terrapin]
Length = 193
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 158/200 (79%), Gaps = 7/200 (3%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAK 75
KHWMLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +D K
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRS 135
VRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK +KLCKVR
Sbjct: 61 VRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK-------YKLCKVRK 113
Query: 136 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 195
+ G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N
Sbjct: 114 IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGAN 173
Query: 196 RGRVGIIKNREKHKGSFETI 215
GR+G+I NRE+H GSF+ +
Sbjct: 174 LGRIGVITNRERHPGSFDVV 193
>gi|330038406|ref|XP_003239588.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
gi|327206512|gb|AEA38690.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
Length = 242
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/247 (55%), Positives = 174/247 (70%), Gaps = 7/247 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA GLKKHLKRL APK W L KL G FAPK SGPHK PL LILRN+LKYA+ RE
Sbjct: 1 MAHGLKKHLKRLKAPKKWALSKLDGIFAPKIKSGPHKKENSYPLSLILRNKLKYAVNTRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VI IL Q+ + VD KVRT K YP G MD++SI KT E FRLLYD+ G F LH I E+
Sbjct: 61 VIQILSQKMIYVDGKVRTQKNYPVGIMDIISIKKTKEIFRLLYDSIGSFTLHRIGKNES- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
K+CKV SV+ G GIPYI T+DGRTIRYPDP+IK+ND++ ++ KI +FI
Sbjct: 120 ------SIKICKVISVKIGNMGIPYIVTHDGRTIRYPDPVIKSNDSVIFNIFKKKIIDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD+G++ +VTGG N G+VGII +EK+ + E I++++ ++F T++ NVF IGKG K
Sbjct: 174 KFDIGSLCIVTGGYNTGKVGIIYYKEKYYNNQEMIYLKNFEENQFFTKISNVFIIGKGNK 233
Query: 241 PWVSLPK 247
++SLPK
Sbjct: 234 SFISLPK 240
>gi|402697604|gb|AFQ90987.1| X-linked ribosomal protein S4, partial [Cyrtodactylus sp. JJF-2012]
Length = 193
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 158/200 (79%), Gaps = 7/200 (3%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAK 75
KHWMLDKL G FAP+PS+GPHK RE LPLI+ LRNRLKYALT EV I MQR + +D K
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRS 135
VRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK +KLCKVR
Sbjct: 61 VRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAK-------YKLCKVRK 113
Query: 136 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 195
+ G KGIP++ T+D RTIRYPDPLIK NDTI+++LET KIT+FIKFD GN+ MVTGG N
Sbjct: 114 IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTGGAN 173
Query: 196 RGRVGIIKNREKHKGSFETI 215
GR+G+I NRE+H GSF+ +
Sbjct: 174 LGRIGVITNRERHPGSFDVV 193
>gi|145475847|ref|XP_001423946.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391008|emb|CAK56548.1| unnamed protein product [Paramecium tetraurelia]
Length = 292
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/266 (51%), Positives = 186/266 (69%), Gaps = 12/266 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KR+ APK WML KLGG + +PS GPHK RE +PL +IL+++LKYAL RE
Sbjct: 28 MARGPKKHMKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARE 87
Query: 61 VIAILMQR--HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
IL + ++ VD KVRTD YP G DV++I KT E++R+LYD +G+F L SI+ EE
Sbjct: 88 STMILADKDGNIKVDGKVRTDSGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEE 147
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
AK FKL KV + G +PYI T D RTIRYP+P I NDT+K+DLE+ K+ E
Sbjct: 148 AK-------FKLVKVTQKKVGPNNVPYIVTNDARTIRYPNPDIHVNDTLKIDLESGKVVE 200
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
F+K + GN+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG
Sbjct: 201 FLKEEPGNLCYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKG 260
Query: 239 TKPWVSLPKGKGIKLSIIEEARKRQA 264
K +SLP G+ L+ +E K+QA
Sbjct: 261 KKSLISLPDDNGLYLTALE---KKQA 283
>gi|145499397|ref|XP_001435684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402818|emb|CAK68287.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 187/265 (70%), Gaps = 9/265 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KR+ APK WML KLGG + +PS GPHK RE +PL +IL+++LKYAL RE
Sbjct: 24 MARGPKKHMKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARE 83
Query: 61 VIAILMQR--HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
V IL + ++ VD KVR+D YP G DV++I KT E++R+LYD +G+F L SI+ +E
Sbjct: 84 VQTILADKDGNIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDE 143
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
AK FKL KV + G +PYI T D RTIRYP+P I NDT+K+DLET K+ +
Sbjct: 144 AK-------FKLVKVTQKKVGPNNVPYIVTSDARTIRYPNPDIHVNDTLKIDLETGKVVD 196
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
F+K + GN+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG
Sbjct: 197 FLKEEPGNLCYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKG 256
Query: 239 TKPWVSLPKGKGIKLSIIEEARKRQ 263
K +SLP G+ L+ +E+ + R+
Sbjct: 257 KKSLISLPDDNGLYLTALEKKQARE 281
>gi|145488765|ref|XP_001430386.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397483|emb|CAK62988.1| unnamed protein product [Paramecium tetraurelia]
Length = 290
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/266 (51%), Positives = 186/266 (69%), Gaps = 12/266 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KR+ APK WML KLGG + +PS GPHK RE +PL +IL+++LKYAL RE
Sbjct: 26 MARGPKKHMKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARE 85
Query: 61 VIAILMQR--HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
IL + ++ VD KVRTD YP G DV++I KT E++R+LYD +G+F L SI+ EE
Sbjct: 86 STMILADKDGNIKVDGKVRTDSGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEE 145
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
AK FKL KV + G +PYI T D RTIRYP+P I NDT+K+DLE+ K+ E
Sbjct: 146 AK-------FKLVKVTQKKVGPNNVPYIVTNDARTIRYPNPDIHVNDTLKIDLESGKVVE 198
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
F+K + GN+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG
Sbjct: 199 FLKEEPGNLCYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKG 258
Query: 239 TKPWVSLPKGKGIKLSIIEEARKRQA 264
K +SLP G+ L+ +E K+QA
Sbjct: 259 KKSLISLPDDNGLYLTALE---KKQA 281
>gi|402909065|ref|XP_003917249.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Papio
anubis]
Length = 246
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/240 (56%), Positives = 168/240 (70%), Gaps = 8/240 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
ML+KL G FAP+PS+ PHK RECLPLI+ LRN+LKYALT EV I MQ + +D VR
Sbjct: 1 MLNKLTGVFAPRPSTDPHKLRECLPLIVFLRNKLKYALTGDEVKNIRMQCFIKIDGTVRV 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
TYPAGFMDV+ I KT E+F L+YDTKG F ++ I EEAK + LCK R
Sbjct: 61 ATTYPAGFMDVIGIEKTGEHFCLVYDTKGCFAVYRIPVEEAK-------YNLCKGRKSTV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIPY+ ++D TI YPDPLIK N +K+DL T KI FIKF GNV MV GG + R
Sbjct: 114 GMKGIPYLVSHDTGTIHYPDPLIKVNHAVKIDLGTGKIINFIKFHTGNVCMVIGGASLSR 173
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG+ NR++H GS +H++DA G+ FATRL N+F IG G+KPW+SLP+ KGI+L+I EE
Sbjct: 174 VGVTTNRQRHPGSLN-VHVRDASGNSFATRLSNIFVIGNGSKPWISLPRRKGIRLTIAEE 232
>gi|118376768|ref|XP_001021565.1| Ribosomal family S4e containing protein [Tetrahymena thermophila]
gi|89303332|gb|EAS01320.1| Ribosomal family S4e containing protein [Tetrahymena thermophila
SB210]
Length = 370
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/292 (49%), Positives = 186/292 (63%), Gaps = 38/292 (13%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAF-----------------------------APKPS 32
ARG KKHLKR+NAPK WML+KLGG + A +PS
Sbjct: 83 ARGPKKHLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIPKLKFIYFKKQATRPS 142
Query: 33 SGPHKSRECLPLILILRNRLKYALTYREVIAIL--MQRHVLVDAKVRTDKTYPAGFMDVV 90
GPHK RE LPL ++L+ RL YAL R+V IL +++V VD KVR DK YP G MDVV
Sbjct: 143 QGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVV 202
Query: 91 SIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYD 150
I KT+++FR+LYDTKGRF L S+ EEAK +KL KV + G IPYI T+D
Sbjct: 203 RIEKTDQSFRILYDTKGRFVLKSLSKEEAK-------YKLLKVTAKAIGPNQIPYIVTHD 255
Query: 151 GRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKG 210
RTIR+P+P IK DT+K DL NKI F + GNV + G N GRVGII++ EKH+G
Sbjct: 256 SRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQG 315
Query: 211 SFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 262
SF+ H++DA G+ FATRLGN+F +G+G K W+ LP G G++ +I+EE +++
Sbjct: 316 SFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRK 367
>gi|162606302|ref|XP_001713181.1| 40S ribosomal protein S4 [Guillardia theta]
gi|4583659|emb|CAB40397.1| 40S ribosomal protein S4 [Guillardia theta]
Length = 257
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 178/252 (70%), Gaps = 7/252 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M+RG+KKH KRLNAPK W+L+KLGG +AP+ SSGPHK + +PL++++RN+LKY+ RE
Sbjct: 1 MSRGIKKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ IL + + VD KVR DK +PAG MDV+SI T EN+R+LYD G F LH I +E+
Sbjct: 61 SLNILKKNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKES- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV V G KGIPYI T+DGRTIR+P+ LIK+ND+I LDL NK+ +FI
Sbjct: 120 ------MFKLCKVIRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF +G++ +V G N GR+G+ N +GS + ++D G F+T+ N+F IGKGTK
Sbjct: 174 KFSIGSLCVVIKGSNIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTK 233
Query: 241 PWVSLPKGKGIK 252
++SLP+ +G++
Sbjct: 234 SFISLPRFRGLR 245
>gi|323332828|gb|EGA74232.1| Rps4ap [Saccharomyces cerevisiae AWRI796]
Length = 203
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/189 (68%), Positives = 151/189 (79%), Gaps = 7/189 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AIL
Sbjct: 22 KKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIL 81
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 82 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA------ 135
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G
Sbjct: 136 -SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAG 194
Query: 186 NVVMVTGGR 194
+V VTGGR
Sbjct: 195 KLVYVTGGR 203
>gi|281182957|ref|NP_001162261.1| 40S ribosomal protein S4, X isoform [Papio anubis]
gi|159487313|gb|ABW97203.1| ribosomal protein S4, X-linked (predicted) [Papio anubis]
Length = 198
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 7/205 (3%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 1 MQRFIKIDGKVRTDITYPAGFMDVMSIDKTGENFRLIYDTKGRFAVHCITPEEAK----- 55
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLCKVR + KG+P++ T+D TIRYPDPLIK NDTI++DLET KIT+FIKFD G
Sbjct: 56 --YKLCKVRKIFVSTKGVPHLVTHDAHTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
N+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG KPW+SL
Sbjct: 114 NLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVTGKGNKPWISL 173
Query: 246 PKGKGIKLSIIEEARKRQALATSAA 270
P+GKGI+L+I EE KR A S+
Sbjct: 174 PRGKGIRLTIAEERDKRLAAKQSSG 198
>gi|397518940|ref|XP_003829632.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Pan paniscus]
Length = 270
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/260 (54%), Positives = 171/260 (65%), Gaps = 9/260 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKHLKR+ PKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT +
Sbjct: 1 MAWGPKKHLKRVAVPKHWMLDKLKGIFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDD 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + +D KVR TYPAGF DV+ I KT E+F L+ D KG + + EEAK
Sbjct: 61 VKEIRMQCFIKIDGKVRVAITYPAGFTDVIGI-KTGEHFCLVCDXKGCSAVDRVTVEEAK 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+ LCKVR V G KGI + T+D TI YPDP+IK N+T++ DL T KI F
Sbjct: 120 -------YNLCKVRKVTMGMKGIQRLVTHDTGTIHYPDPVIKVNNTVQTDLGTGKIINFS 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF GN MV GG + VG+ NRE H GS H++DA G+ FA RL N+F G+K
Sbjct: 173 KFHTGNACMVIGGASLRHVGVT-NREGHPGSLNVGHVRDANGNSFALRLSNIFVTANGSK 231
Query: 241 PWVSLPKGKGIKLSIIEEAR 260
PW+SLP+GKG +L+ E R
Sbjct: 232 PWISLPRGKGTRLAEKREKR 251
>gi|145495133|ref|XP_001433560.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400678|emb|CAK66163.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 131/257 (50%), Positives = 181/257 (70%), Gaps = 9/257 (3%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68
+KR+ APK WML KLGG + +PS GPHK RE +PL +IL+ +LKYAL REV IL +
Sbjct: 1 MKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQQKLKYALYAREVQMILADK 60
Query: 69 --HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+V VD KVR+D YP G +DV++I KT E++R+LYD +G+F L SI+ +EAK
Sbjct: 61 DGNVKVDGKVRSDFGYPVGLLDVITIDKTRESYRVLYDVQGKFILKSIKPDEAK------ 114
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 186
FKL KV + G +PYI T D RTIRYP+P I NDT+K+DLET K+ +FIK + GN
Sbjct: 115 -FKLVKVTQKKVGPNNVPYIVTNDARTIRYPNPEIHINDTLKIDLETGKVVDFIKEEPGN 173
Query: 187 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 246
+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG KP +SLP
Sbjct: 174 ICYIVGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKPLISLP 233
Query: 247 KGKGIKLSIIEEARKRQ 263
G+ L+ +E+ + R+
Sbjct: 234 DDNGLYLTALEKKQARE 250
>gi|70909483|emb|CAJ17166.1| ribosomal protein S4e [Curculio glandium]
Length = 188
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 153/195 (78%), Gaps = 7/195 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAPK WMLDKLGG F P+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVFTPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR + VD K+RTD YPAGFMDVV+I KT E FRL+YD KG +H I EEAK
Sbjct: 61 VTKIVMQRLIKVDGKIRTDPNYPAGFMDVVTIEKTGEFFRLIYDDKGTVSIHRITAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR VQ G KG+P++ T+DG+TIRYPDP+IK NDTI+L++ T+KI +FI
Sbjct: 121 -------YKLCKVRKVQTGPKGVPFLVTHDGKTIRYPDPMIKVNDTIQLEIATSKILDFI 173
Query: 181 KFDVGNVVMVTGGRN 195
KF+ GN+ M+TGGRN
Sbjct: 174 KFESGNLCMITGGRN 188
>gi|76803657|gb|ABA55738.1| 40S ribosomal protein S4 [Mytilus edulis]
Length = 204
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 158/205 (77%), Gaps = 7/205 (3%)
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
EV I+ QR + VD KVRTD T+PAGFMDVV+I KT ENFRLLYD KGRF +H I+ EEA
Sbjct: 5 EVKKIVHQRLIKVDGKVRTDMTFPAGFMDVVTIDKTQENFRLLYDVKGRFAVHRIKSEEA 64
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
K +KLC+V+ V KG+ Y+ T+DGRTIRYPDPL+K NDTI +D+ T KI +F
Sbjct: 65 K-------YKLCRVKKVGVALKGVCYVVTHDGRTIRYPDPLVKVNDTIMVDIATGKIKDF 117
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
IKFD GN+ M+TGG N GRVG+I++RE+H GSF+ +HI+D+LGH FATRL VF IGKG
Sbjct: 118 IKFDSGNLCMITGGHNLGRVGVIQHRERHPGSFDIVHIKDSLGHSFATRLSYVFIIGKGN 177
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQA 264
KP+VSLP+GKG+KLSI EE +R A
Sbjct: 178 KPYVSLPRGKGVKLSIAEERDRRMA 202
>gi|123376214|ref|XP_001297934.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|123468788|ref|XP_001317610.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|154417078|ref|XP_001581560.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|154420837|ref|XP_001583433.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121878306|gb|EAX85004.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121900348|gb|EAY05387.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121915788|gb|EAY20574.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121917674|gb|EAY22447.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 255
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 174/257 (67%), Gaps = 7/257 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M R + HLKRL AP HW+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E
Sbjct: 1 MPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+AI+ +R V VD KVRT+ YP G MDV+ + K+NE FR++YD KGRF +H I +EA
Sbjct: 61 AVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL +V + G KGIP++ T+DGRTI Y DP ++ +D +K +++T ++ I
Sbjct: 120 ------SFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF VG+V MVT G N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+
Sbjct: 174 KFKVGDVAMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEH 233
Query: 241 PWVSLPKGKGIKLSIIE 257
P +SLP +G++ SI+E
Sbjct: 234 PLISLPAREGVRPSILE 250
>gi|123477532|ref|XP_001321933.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121904769|gb|EAY09710.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 269
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 174/257 (67%), Gaps = 7/257 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M R + HLKRL AP HW+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E
Sbjct: 15 MPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKE 74
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+AI+ +R V VD KVRT+ YP G MDV+ + K+NE FR++YD KGRF +H I +EA
Sbjct: 75 AVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEA- 133
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL +V + G KGIP++ T+DGRTI Y DP ++ +D +K +++T ++ I
Sbjct: 134 ------SFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVI 187
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF VG+V MVT G N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+
Sbjct: 188 KFKVGDVAMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEH 247
Query: 241 PWVSLPKGKGIKLSIIE 257
P +SLP +G++ SI+E
Sbjct: 248 PLISLPAREGVRPSILE 264
>gi|123439290|ref|XP_001310418.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121892187|gb|EAX97488.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 255
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 174/257 (67%), Gaps = 7/257 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M R + HLKRL AP HW+L K G FA PS+GPHK RECLP+ + LR+RLKYALT +E
Sbjct: 1 MPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+AI+ +R V VD KVRT+ YP G MDV+ + K+NE FR++YD KGRF +H I +EA
Sbjct: 61 AVAIVKRRLVKVDGKVRTNYRYPTGLMDVIGLGKSNELFRIIYDCKGRFCVHHIEAKEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKL +V + G KGIP++ T+DGRTI Y DP ++ +D +K +++T ++ I
Sbjct: 120 ------SFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVI 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF VG+V MVT G N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+
Sbjct: 174 KFKVGDVAMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEH 233
Query: 241 PWVSLPKGKGIKLSIIE 257
P +SLP +G++ SI+E
Sbjct: 234 PLISLPAREGVRPSILE 250
>gi|217071784|gb|ACJ84252.1| unknown [Medicago truncatula]
Length = 196
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/141 (87%), Positives = 132/141 (93%)
Query: 131 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 190
+VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FIKFDVGNVVMV
Sbjct: 56 ARVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMV 115
Query: 191 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 250
TGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGN FTIGKGTKPWVSLPKGKG
Sbjct: 116 TGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNAFTIGKGTKPWVSLPKGKG 175
Query: 251 IKLSIIEEARKRQALATSAAA 271
IKL++IEEARKRQA AA
Sbjct: 176 IKLTVIEEARKRQAAQNVTAA 196
>gi|145500014|ref|XP_001435991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403128|emb|CAK68594.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 181/257 (70%), Gaps = 9/257 (3%)
Query: 9 LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68
+KR+ APK WML KLGG + +PS GPHK RE +PL +IL+++LKYAL REV IL +
Sbjct: 1 MKRITAPKSWMLSKLGGNWTTRPSQGPHKLRESIPLSVILQHKLKYALYAREVQMILADK 60
Query: 69 --HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
++ VD KVR+D YP G DV++I KT E++R+LYD +G+F L SI+ +EAK
Sbjct: 61 DGNIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAK------ 114
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 186
FKL KV + G +PYI T DGRTIRYP+P I NDT+K++LET KI +F+K + GN
Sbjct: 115 -FKLVKVTQKKVGPNNVPYIVTNDGRTIRYPNPEIHVNDTLKIELETGKIVDFLKEEPGN 173
Query: 187 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 246
+ + GG N GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP
Sbjct: 174 LCYIIGGNNIGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLP 233
Query: 247 KGKGIKLSIIEEARKRQ 263
G+ L+ +E+ + R+
Sbjct: 234 DDNGLYLTALEKKQARE 250
>gi|207344483|gb|EDZ71609.1| YHR203Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323308725|gb|EGA61964.1| Rps4bp [Saccharomyces cerevisiae FostersO]
gi|323333218|gb|EGA74617.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
gi|323336905|gb|EGA78163.1| Rps4ap [Saccharomyces cerevisiae Vin13]
gi|323337382|gb|EGA78635.1| Rps4bp [Saccharomyces cerevisiae Vin13]
gi|323347847|gb|EGA82109.1| Rps4ap [Saccharomyces cerevisiae Lalvin QA23]
gi|323348218|gb|EGA82468.1| Rps4bp [Saccharomyces cerevisiae Lalvin QA23]
gi|323354726|gb|EGA86561.1| Rps4bp [Saccharomyces cerevisiae VL3]
gi|365764787|gb|EHN06308.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765294|gb|EHN06806.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 196
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/199 (62%), Positives = 155/199 (77%), Gaps = 7/199 (3%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA------ 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G
Sbjct: 55 -SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
+V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SL
Sbjct: 114 KLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISL 173
Query: 246 PKGKGIKLSIIEEARKRQA 264
PKGKGIKLSI EE +R+A
Sbjct: 174 PKGKGIKLSIAEERDRRRA 192
>gi|388506280|gb|AFK41206.1| unknown [Lotus japonicus]
Length = 141
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/141 (90%), Positives = 132/141 (93%), Gaps = 7/141 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRH+LVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYD KGRFRLHS+RD+EAK
Sbjct: 61 VIAILMQRHILVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDIKGRFRLHSVRDDEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQK 141
FKLCKVRSVQFGQ+
Sbjct: 121 -------FKLCKVRSVQFGQR 134
>gi|390331682|ref|XP_001192878.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
purpuratus]
Length = 253
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/263 (55%), Positives = 166/263 (63%), Gaps = 54/263 (20%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARG KKHLKRLNAPKHWML KL G FAP+ S+GPHK RECLPLI+ LRNRLKYALTY E
Sbjct: 42 ARGPKKHLKRLNAPKHWMLAKLTGNFAPRASTGPHKLRECLPLIIFLRNRLKYALTYVET 101
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+Y+ KGRF +H I EEA
Sbjct: 102 KKIMMQRLIKVDGKVRTDITYPAGFMDVISINKTGENFRLIYNVKGRFVVHRIGSEEA-- 159
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
KVR V P +K
Sbjct: 160 ----------KVRFVI--------------------HPRLK------------------- 170
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
G++ M+TGGRN GRVG I +REKH GSFE +HI+DA H +ATRLGNVF IGK K
Sbjct: 171 ---GHLCMITGGRNLGRVGTITHREKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKA 227
Query: 242 WVSLPKGKGIKLSIIEEARKRQA 264
+VSLPKGKGI+L+I EE KR A
Sbjct: 228 YVSLPKGKGIRLTIAEEREKRIA 250
>gi|148700270|gb|EDL32217.1| mCG6316 [Mus musculus]
Length = 180
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/187 (68%), Positives = 147/187 (78%), Gaps = 7/187 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D K+RT YPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKEICMQRFIKIDGKIRTGIIYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D TIRYPDPLIK NDTI++DLET KIT+FI
Sbjct: 121 -------YKLCKVRKIFVGTKGIPHLVTHDALTIRYPDPLIKVNDTIQIDLETGKITDFI 173
Query: 181 KFDVGNV 187
KFD GN+
Sbjct: 174 KFDTGNL 180
>gi|365759818|gb|EHN01586.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365760266|gb|EHN01998.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401837629|gb|EJT41534.1| RPS4B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 196
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/199 (62%), Positives = 155/199 (77%), Gaps = 7/199 (3%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA------ 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KL KV+ VQ G+KG+PY+ T+DGRT+RYPDP IK NDT+K+DL + KIT+FIKFD G
Sbjct: 55 -SYKLGKVKKVQLGKKGVPYVVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFIKFDAG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
+V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SL
Sbjct: 114 KLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISL 173
Query: 246 PKGKGIKLSIIEEARKRQA 264
PKGKGIKLSI EE +R+A
Sbjct: 174 PKGKGIKLSIAEERDRRRA 192
>gi|156843178|ref|XP_001644658.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
70294]
gi|156115305|gb|EDO16800.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 196
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/199 (62%), Positives = 154/199 (77%), Gaps = 7/199 (3%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 1 MQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEA------ 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL T KIT++IKFD G
Sbjct: 55 -SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPSIKVNDTVKIDLATGKITDYIKFDAG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
+V VTGGRN GR+G I ++E+H G F+ +HI+D L + F TRL NVF IG+ KP++SL
Sbjct: 114 KLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDTLDNTFVTRLNNVFVIGEQGKPYISL 173
Query: 246 PKGKGIKLSIIEEARKRQA 264
PKGKGIKL+I EE +R+A
Sbjct: 174 PKGKGIKLTIAEERDRRRA 192
>gi|323304309|gb|EGA58083.1| Rps4ap [Saccharomyces cerevisiae FostersB]
Length = 196
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/199 (62%), Positives = 154/199 (77%), Gaps = 7/199 (3%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQRHV VD KVRTD T PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 1 MQRHVKVDGKVRTDTTXPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA------ 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G
Sbjct: 55 -SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
+V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SL
Sbjct: 114 KLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISL 173
Query: 246 PKGKGIKLSIIEEARKRQA 264
PKGKGIKLSI EE +R+A
Sbjct: 174 PKGKGIKLSIAEERDRRRA 192
>gi|60418888|gb|AAX19871.1| putative ribosomal protein S4, partial [Doryanthes excelsa]
Length = 131
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/138 (90%), Positives = 131/138 (94%), Gaps = 7/138 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARGLKKHLKRLNAPKHWML+KLGGAFAPKPSSGPHK+RECLPLILILRN+LKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLNKLGGAFAPKPSSGPHKARECLPLILILRNKLKYALTYRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
VIAILMQRHV+VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VIAILMQRHVMVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 121 ALILLFQFKLCKVRSVQF 138
FKLCKVR+VQF
Sbjct: 121 -------FKLCKVRNVQF 131
>gi|444722371|gb|ELW63068.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 618
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 156/211 (73%), Gaps = 7/211 (3%)
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
EV I QR + +D KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I +EA
Sbjct: 113 EVKKICTQRFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEA 172
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
K +KLCKVR + G KGIP++ T+D RTIRY DPLIK NDTI++DLET K ++F
Sbjct: 173 K-------YKLCKVRKIFLGTKGIPHLVTHDARTIRYLDPLIKVNDTIQIDLETGKSSDF 225
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
IKFD GN+ MV GG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G
Sbjct: 226 IKFDTGNLCMVAGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGN 285
Query: 240 KPWVSLPKGKGIKLSIIEEARKRQALATSAA 270
KP +SLP+GKGI+L+I +E KR A S +
Sbjct: 286 KPGISLPRGKGIRLTIAKERDKRPAAKQSTS 316
>gi|71755051|ref|XP_828440.1| 40s ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|71755053|ref|XP_828441.1| 40S ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802195|pdb|3ZEY|1 Chain 1, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833826|gb|EAN79328.1| 40s ribosomal protein S4, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|70833827|gb|EAN79329.1| 40S ribosomal protein S4, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 273
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/254 (53%), Positives = 170/254 (66%), Gaps = 8/254 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK RECL L++I+RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L +R EA++ I
Sbjct: 63 RQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFAL--VRVSEAESSI-- 118
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
K+ KV +V G IP T+DG IRYPDP DT+ D++ K+ + IK G
Sbjct: 119 ---KMMKVVNVYTGTGRIPVAVTHDGHRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VS 244
VVMVTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK V+
Sbjct: 176 KVVMVTGGANRGRIGEIVSIERHPGAFDIARLKDASGHEFATRATNIFVIGKDMSSVPVT 235
Query: 245 LPKGKGIKLSIIEE 258
LPK +G+++++I+E
Sbjct: 236 LPKQQGLRINVIQE 249
>gi|340058530|emb|CCC52888.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
Length = 273
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/255 (52%), Positives = 173/255 (67%), Gaps = 8/255 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+KKHLKRL APK WML KL G FAP+P +GPHK RECL LI+I+RNRLKYAL RE I
Sbjct: 2 VKKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLIIIIRNRLKYALNAREAQMI 61
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q V VD K R D YPAGFMDVV IP+T + FR+LYD KGRF L +R EA+A I
Sbjct: 62 LRQGFVHVDGKPRKDGKYPAGFMDVVEIPETGDRFRILYDVKGRFAL--VRISEAEAGI- 118
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
K+ KV +V G +P T+DG IRYPDP + DT+ D++ K + I+
Sbjct: 119 ----KMLKVINVYTGTGRVPVAVTHDGHRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGK 174
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-V 243
G VV+VTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK K +
Sbjct: 175 GRVVLVTGGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRATNIFVIGKDMKSIPI 234
Query: 244 SLPKGKGIKLSIIEE 258
+LPK +G+++++I+E
Sbjct: 235 TLPKQQGLRINVIQE 249
>gi|340058531|emb|CCC52889.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
Length = 273
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/255 (52%), Positives = 173/255 (67%), Gaps = 8/255 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+KKHLKRL APK WML KL G FAP+P +GPHK RECL LI+I+RNRLKYAL RE I
Sbjct: 2 VKKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLIIIIRNRLKYALNAREAQMI 61
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q V VD K R D YPAGFMDVV IP+T + FR+LYD KGRF L +R EA+A I
Sbjct: 62 LRQGFVHVDGKPRKDGKYPAGFMDVVEIPETGDRFRILYDVKGRFAL--VRISEAEAGI- 118
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
K+ KV +V G +P T+DG IRYPDP + DT+ D++ K + I+
Sbjct: 119 ----KMLKVINVYTGTGRVPVAVTHDGHRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGN 174
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-V 243
G VV+VTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK K +
Sbjct: 175 GRVVLVTGGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRATNIFVIGKDMKSIPI 234
Query: 244 SLPKGKGIKLSIIEE 258
+LPK +G+++++I+E
Sbjct: 235 TLPKQQGLRINVIQE 249
>gi|119623175|gb|EAX02770.1| ribosomal protein S4, Y-linked 1, isoform CRA_a [Homo sapiens]
Length = 179
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 144/186 (77%), Gaps = 7/186 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FI
Sbjct: 121 -------YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFI 173
Query: 181 KFDVGN 186
KFD G
Sbjct: 174 KFDTGQ 179
>gi|355703406|gb|EHH29897.1| hypothetical protein EGK_10441, partial [Macaca mulatta]
Length = 245
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 133/247 (53%), Positives = 168/247 (68%), Gaps = 13/247 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
+A G K+HLKR+ A +HWMLDKL G FA +PS+GPHK RECLP I LRNRLKYALT E
Sbjct: 12 VAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPHIF-LRNRLKYALTGDE 70
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + VD K+RTD P MDV+SI K E+F L+Y RF LH I EE K
Sbjct: 71 VKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVK 130
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCK+R + KGIP++ +D T+R+PD LIK NDTI++DLET KIT +
Sbjct: 131 -------YKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-L 182
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ +VTGG N GR+G+I NRE+H SF+T H++DA + F+ +F I KG K
Sbjct: 183 KFDTGNLCLVTGGANWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNK 238
Query: 241 PWVSLPK 247
PW+SLP+
Sbjct: 239 PWISLPR 245
>gi|343473038|emb|CCD14963.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 307
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 165/254 (64%), Gaps = 8/254 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK RECL L++I+RNRLKYAL E IL
Sbjct: 37 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNAHEAQMIL 96
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA
Sbjct: 97 RQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEA------ 150
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
K+ KV +V G IP T+DG IRYPDP DT+ D++ K+T+ IK G
Sbjct: 151 -GMKMMKVVNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSG 209
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VS 244
VVMVTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK V+
Sbjct: 210 KVVMVTGGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVT 269
Query: 245 LPKGKGIKLSIIEE 258
LPK G++ ++I E
Sbjct: 270 LPKQLGLRKNVIVE 283
>gi|342185473|emb|CCC94956.1| putative 40S ribosomal protein S4 [Trypanosoma congolense IL3000]
Length = 273
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 165/254 (64%), Gaps = 8/254 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK RECL L++I+RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNAHEAQMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA
Sbjct: 63 RQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEA------ 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
K+ KV +V G IP T+DG IRYPDP DT+ D++ K+T+ IK G
Sbjct: 117 -GMKMMKVVNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VS 244
VVMVTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK V+
Sbjct: 176 KVVMVTGGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVT 235
Query: 245 LPKGKGIKLSIIEE 258
LPK G++ ++I E
Sbjct: 236 LPKQLGLRKNVIVE 249
>gi|414587746|tpg|DAA38317.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 193
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/191 (69%), Positives = 148/191 (77%), Gaps = 26/191 (13%)
Query: 27 FAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGF 86
+APKPSSGPHKSRECLPLILI+RNRLKYALTY EVI+ILMQ +VLVD K+
Sbjct: 21 WAPKPSSGPHKSRECLPLILIIRNRLKYALTYLEVISILMQHYVLVDGKM---------- 70
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
S P + T G FRLH IRDE+AK FKLCKVRS+QFGQKGIPY+
Sbjct: 71 ----SFPSLRQ-----MRTTGFFRLHPIRDEDAK-------FKLCKVRSIQFGQKGIPYL 114
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
NTY+ TIRYPD LIKANDTIK++LETNKI +FIKFDVGNVVMVTGGRN GRVG+IKN+E
Sbjct: 115 NTYNDCTIRYPDLLIKANDTIKIELETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNKE 174
Query: 207 KHKGSFETIHI 217
KHKGSFETIH+
Sbjct: 175 KHKGSFETIHV 185
>gi|431917973|gb|ELK17202.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 258
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/270 (51%), Positives = 165/270 (61%), Gaps = 43/270 (15%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK + APKHWMLDKL G FAP PS HK +E LPLI+ LRN LKYALT E
Sbjct: 32 MARGPKKHLKWVAAPKHWMLDKLTGVFAPHPSISSHKLKESLPLIIFLRNSLKYALTGDE 91
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D +V+TD TYPAGFMDV+SI K EN+ LL DTKG F + I EEAK
Sbjct: 92 VKKICMQRFIKIDGQVQTDVTYPAGFMDVISIDKIRENYCLLCDTKGHFTVREITTEEAK 151
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
KLCK+ DLET KIT+FI
Sbjct: 152 -------HKLCKI------------------------------------DLETGKITDFI 168
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ MVTG N GR+G+I NRE+H GS + +H++DA G+ FATRL N+F IGKG
Sbjct: 169 KFDTGNLCMVTGSANLGRIGVITNRERHPGSCDVVHVKDANGNSFATRLSNIFVIGKGNN 228
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAA 270
+SLP GKGI L+I ++ KR A S+
Sbjct: 229 QGISLPCGKGIHLTIAKDRDKRLAAKQSSG 258
>gi|261334297|emb|CBH17291.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
DAL972]
gi|261334298|emb|CBH17292.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
DAL972]
Length = 273
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 169/254 (66%), Gaps = 8/254 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK RECL L++I+RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L +R EA++ I
Sbjct: 63 RQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFAL--VRVSEAESSI-- 118
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
K+ KV +V G IP T+DG IRYPDP DT+ D++ K+ + IK G
Sbjct: 119 ---KMMKVVNVYTGTGRIPVAVTHDGHRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VS 244
VVMVTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IG V+
Sbjct: 176 KVVMVTGGANRGRIGEIVSIERHPGAFDIARLKDASGHEFATRATNIFVIGNDMSSVPVT 235
Query: 245 LPKGKGIKLSIIEE 258
LPK +G+++++I+E
Sbjct: 236 LPKQQGLRINVIQE 249
>gi|307213994|gb|EFN89201.1| 40S ribosomal protein S4 [Harpegnathos saltator]
Length = 198
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 150/200 (75%), Gaps = 7/200 (3%)
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
+MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK
Sbjct: 1 MMQRLIKVDGKVRTDSNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAK---- 56
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+KLCKV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ T KI + I+FD
Sbjct: 57 ---YKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSIRFDS 113
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 244
GN+ M+T GRN GRVG + NRE+H GSF+ H++DA GH FATRL NVF IGKGTK +VS
Sbjct: 114 GNLCMITSGRNLGRVGTVVNRERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTKAYVS 173
Query: 245 LPKGKGIKLSIIEEARKRQA 264
LP+ KG+KLSI EE +R A
Sbjct: 174 LPRDKGVKLSIAEERDRRLA 193
>gi|109124282|ref|XP_001109776.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Macaca
mulatta]
Length = 244
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 133/246 (54%), Positives = 167/246 (67%), Gaps = 13/246 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
+A G K+HLKR+ A +HWMLDKL G FA +PS+GPHK RECLP I LRNRLKYALT E
Sbjct: 12 VAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPHIF-LRNRLKYALTGDE 70
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQ + VD K+RTD P MDV+SI K E+F L+Y RF LH I EE K
Sbjct: 71 VKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVK 130
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KLCK+R + KGIP++ +D T+R+PD LIK NDTI++DLET KIT +
Sbjct: 131 -------YKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-L 182
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KFD GN+ +VTGG N GR+G+I NRE+H SF+T H++DA + F+ +F I KG K
Sbjct: 183 KFDTGNLCLVTGGGNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNK 238
Query: 241 PWVSLP 246
PW+SLP
Sbjct: 239 PWISLP 244
>gi|71415246|ref|XP_809696.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|71415254|ref|XP_809700.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|71653417|ref|XP_815346.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|2981290|gb|AAC38966.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
gi|2981292|gb|AAC38967.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
gi|70874118|gb|EAN87845.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|70874122|gb|EAN87849.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|70880395|gb|EAN93495.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|83375600|gb|ABC17643.1| ribosomal protein S4 copy 1 [Trypanosoma cruzi]
gi|83375601|gb|ABC17644.1| ribosomal protein S4 copy 2 [Trypanosoma cruzi]
gi|83375604|gb|ABC17646.1| ribosomal protein S4 copy 3 [Trypanosoma cruzi]
gi|205278880|gb|ACI02315.1| ribosomal protein S4-like protein [Trypanosoma cruzi]
gi|407852324|gb|EKG05879.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
Length = 273
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 171/265 (64%), Gaps = 9/265 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK REC+ L++I+RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECMTLMIIIRNRLKYALNAAEAQMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD K R D YP GFMDVV IP+T + FR+LYD KGRF L + + E
Sbjct: 63 RQGLVCVDGKPRKDTKYPVGFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEG------ 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
KL KV +V IP T+DG IRYPDP DT+ +L+ K+ + IK G
Sbjct: 117 -NIKLLKVENVYTSTGRIPVAMTHDGHRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VS 244
VVMVTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK + V+
Sbjct: 176 KVVMVTGGANRGRIGEIMSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMQSVPVT 235
Query: 245 LPKGKGIKLSIIEEARKRQALATSA 269
LPK +G+++++I+E R+ + +A A
Sbjct: 236 LPKQQGLRINVIQE-REEKLIAAEA 259
>gi|189484049|gb|ACE00318.1| ribosomal protein S4 [Caenorhabditis brenneri]
Length = 212
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 156/216 (72%), Gaps = 7/216 (3%)
Query: 49 RNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 108
RNRLKYAL Y E IL QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR
Sbjct: 1 RNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGR 60
Query: 109 FRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIK 168
+ +H I+ EA FKLCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI
Sbjct: 61 YVVHRIQAAEA-------DFKLCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIV 113
Query: 169 LDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 228
++ T KIT+F+KF+ GN+ VTGGRN GRVGII +RE+ G+F+ IHI+DA GH FATR
Sbjct: 114 FNINTQKITDFVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGAFDIIHIKDAAGHSFATR 173
Query: 229 LGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 264
+ NVF IGKG K VSLP G G++L+I EE KR A
Sbjct: 174 ISNVFVIGKGNKALVSLPSGGGVRLTIAEERDKRMA 209
>gi|195548072|gb|ACG49261.1| 40S ribosomal protein S4 [Anopheles stephensi]
Length = 187
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 148/194 (76%), Gaps = 7/194 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRLNAP+ WMLDK GG FAP+PS+GPHK RE LPL++ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRLNAPRGWMLDKTGGTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQRHV +D KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRHVKIDGKVRTDPNYPAGFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV+ VQ G K +PY+ T+DGRTIRYPDP I +D+I+ D+ T KI + +
Sbjct: 121 -------YKLLKVKRVQIGPKRVPYLLTHDGRTIRYPDPAIHQHDSIQYDIATGKILDVL 173
Query: 181 KFDVGNVVMVTGGR 194
KF+ GN+ M+TGGR
Sbjct: 174 KFEPGNLYMITGGR 187
>gi|407412707|gb|EKF34479.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi marinkellei]
Length = 273
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 171/265 (64%), Gaps = 9/265 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P +GPHK REC+ L++I+RNRLKYAL E IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRAGPHKLRECMTLMIIIRNRLKYALNAAEAQMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD K R D YP GFMDVV IP+T + FR+LYD KGRF L + + E
Sbjct: 63 RQGLVCVDGKPRKDTKYPVGFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEG------ 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
KL KV +V IP T+DG IRYPDP DT+ +L+ K+ + IK G
Sbjct: 117 -NIKLLKVVNVYTSTGRIPVAMTHDGHRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VS 244
VVMVTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK + V+
Sbjct: 176 KVVMVTGGANRGRIGEIMSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMQSVPVT 235
Query: 245 LPKGKGIKLSIIEEARKRQALATSA 269
LPK +G+++++I+E R+ + +A A
Sbjct: 236 LPKQQGLRINVIQE-REEKLIAAEA 259
>gi|154333974|ref|XP_001563242.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060254|emb|CAM45663.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 273
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/258 (51%), Positives = 166/258 (64%), Gaps = 8/258 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++I+RNRLKYAL RE IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD R D YPAGFMDV+ IPKT + FRLLYD KGRF L S+ + EA
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVIEIPKTGDRFRLLYDVKGRFALVSVSEAEA------ 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
Q KL KV ++ +P T+DG IRYPDP DTI ++ K + IK G
Sbjct: 117 -QIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHCSIGDTIVYNVNEKKCVDLIKNRQG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-TKPWVS 244
V+VTGG NRGR+G I E+H G+F+ H++DA G EFATR N+F IGK V+
Sbjct: 176 KAVIVTGGANRGRIGEIVKVERHPGAFDIAHLKDASGAEFATRAANIFVIGKDLNNLQVT 235
Query: 245 LPKGKGIKLSIIEEARKR 262
+PK +G+++++I+E +R
Sbjct: 236 VPKQQGLRMNVIQEREER 253
>gi|413948238|gb|AFW80887.1| hypothetical protein ZEAMMB73_153699 [Zea mays]
Length = 377
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/190 (70%), Positives = 144/190 (75%), Gaps = 26/190 (13%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
APKPSSGPHKSRECLPLILI+RNRLKYA TYREVI+ILMQ HVLVD K M
Sbjct: 206 APKPSSGPHKSRECLPLILIIRNRLKYAPTYREVISILMQHHVLVDGK-----------M 254
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
S+ +T T G FRLH IRDE+AK FKL KVRSVQFGQK IPY+N
Sbjct: 255 SFPSLRQTR--------TTGCFRLHPIRDEDAK-------FKLYKVRSVQFGQKDIPYLN 299
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
TYD RTIRYPDPLIKANDTIK+DLETNKI +FI FDVGNVVMV G RN GRVG+IK REK
Sbjct: 300 TYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIMFDVGNVVMVIGRRNTGRVGVIKIREK 359
Query: 208 HKGSFETIHI 217
HKG+FETIH+
Sbjct: 360 HKGNFETIHV 369
>gi|146080976|ref|XP_001464142.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|134068232|emb|CAM66518.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
Length = 480
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/258 (51%), Positives = 165/258 (63%), Gaps = 8/258 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++I+RNRLKYAL RE IL
Sbjct: 210 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 269
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L S+ + EA
Sbjct: 270 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEA------ 323
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
Q KL KV ++ +P T+DG IRYPDP DTI +++ K + IK G
Sbjct: 324 -QIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQG 382
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VS 244
V+VTGG NRGR+G I E H G+F H++DA G EFATR N+F IGK V+
Sbjct: 383 KAVIVTGGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNHLQVT 442
Query: 245 LPKGKGIKLSIIEEARKR 262
+PK +G+++++I+E +R
Sbjct: 443 VPKQQGLRMNVIQEREER 460
>gi|146080974|ref|XP_001464141.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|398012258|ref|XP_003859323.1| 40S ribosomal protein S4, putative [Leishmania donovani]
gi|134068231|emb|CAM66517.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|322497537|emb|CBZ32611.1| 40S ribosomal protein S4, putative [Leishmania donovani]
Length = 273
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/258 (51%), Positives = 165/258 (63%), Gaps = 8/258 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++I+RNRLKYAL RE IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L S+ + EA
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEA------ 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
Q KL KV ++ +P T+DG IRYPDP DTI +++ K + IK G
Sbjct: 117 -QIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VS 244
V+VTGG NRGR+G I E H G+F H++DA G EFATR N+F IGK V+
Sbjct: 176 KAVIVTGGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNHLQVT 235
Query: 245 LPKGKGIKLSIIEEARKR 262
+PK +G+++++I+E +R
Sbjct: 236 VPKQQGLRMNVIQEREER 253
>gi|401417661|ref|XP_003873323.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489552|emb|CBZ24810.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 430
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 167/262 (63%), Gaps = 8/262 (3%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
A+ KKHLKRL APK WML KL G FAP+P GPHK RECLPL++I+RNRLKYAL RE
Sbjct: 156 AKMAKKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREG 215
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L ++ + EA
Sbjct: 216 EMILRQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEA-- 273
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
Q KL KV ++ +P T+DG IRYPDP DTI +++ K + IK
Sbjct: 274 -----QIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIK 328
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-TK 240
G V+VTGG NRGR+G I E H G+F H++DA G EFATR N+F IGK
Sbjct: 329 NRQGKAVIVTGGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNN 388
Query: 241 PWVSLPKGKGIKLSIIEEARKR 262
V++PK +G+++++I+E +R
Sbjct: 389 LQVTVPKQQGLRMNVIQEREER 410
>gi|302172089|gb|ADK97882.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172095|gb|ADK97885.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172097|gb|ADK97886.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172099|gb|ADK97887.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172101|gb|ADK97888.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172103|gb|ADK97889.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172111|gb|ADK97893.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172113|gb|ADK97894.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172115|gb|ADK97895.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172121|gb|ADK97898.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097681|gb|ADW09575.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
gi|320097683|gb|ADW09576.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
gi|320097685|gb|ADW09577.1| putative 40S ribosomal protein S4-like protein [Schiedea
membranacea]
gi|320097687|gb|ADW09578.1| putative 40S ribosomal protein S4-like protein [Schiedea
membranacea]
gi|320097689|gb|ADW09579.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097693|gb|ADW09581.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097697|gb|ADW09583.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097701|gb|ADW09585.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097705|gb|ADW09587.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097707|gb|ADW09588.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097717|gb|ADW09593.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097719|gb|ADW09594.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097721|gb|ADW09595.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097723|gb|ADW09596.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097725|gb|ADW09597.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097727|gb|ADW09598.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097729|gb|ADW09599.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097731|gb|ADW09600.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097733|gb|ADW09601.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097735|gb|ADW09602.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097737|gb|ADW09603.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097739|gb|ADW09604.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097741|gb|ADW09605.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097743|gb|ADW09606.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097745|gb|ADW09607.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097747|gb|ADW09608.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097749|gb|ADW09609.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097751|gb|ADW09610.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097753|gb|ADW09611.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097757|gb|ADW09613.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097761|gb|ADW09615.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097781|gb|ADW09625.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
Length = 132
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 116/132 (87%), Positives = 127/132 (96%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGT+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 248 GKGIKLSIIEEA 259
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|401417663|ref|XP_003873324.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489553|emb|CBZ24811.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 273
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/258 (51%), Positives = 165/258 (63%), Gaps = 8/258 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++I+RNRLKYAL RE IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L ++ + EA
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEA------ 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
Q KL KV ++ +P T+DG IRYPDP DTI +++ K + IK G
Sbjct: 117 -QIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-TKPWVS 244
V+VTGG NRGR+G I E H G+F H++DA G EFATR N+F IGK V+
Sbjct: 176 KAVIVTGGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVT 235
Query: 245 LPKGKGIKLSIIEEARKR 262
+PK +G+++++I+E +R
Sbjct: 236 VPKQQGLRMNVIQEREER 253
>gi|344244607|gb|EGW00711.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 187
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/190 (64%), Positives = 143/190 (75%), Gaps = 11/190 (5%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRT
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMDV+SI KT + FRL+YDTKG F +H I EEAK +K CKVR +
Sbjct: 61 DITYPAGFMDVISIDKTGQKFRLIYDTKGHFAVHRITPEEAK-------YKWCKVRKIFV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIPY+ ++D RTIRYPDPLIK NDTI++DLET IKFD GN+ MVTGG N GR
Sbjct: 114 GTKGIPYLVSHDARTIRYPDPLIKVNDTIQIDLETGA----IKFDTGNLCMVTGGANLGR 169
Query: 199 VGIIKNREKH 208
+G+I NRE+H
Sbjct: 170 IGVITNRERH 179
>gi|157866320|ref|XP_001681866.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|157866322|ref|XP_001681867.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|11066280|gb|AAG28535.1|AF199018_1 40S ribosomal protein S4 [Leishmania major]
gi|68125165|emb|CAJ03041.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|68125166|emb|CAJ03044.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
Length = 273
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/264 (50%), Positives = 167/264 (63%), Gaps = 8/264 (3%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
KKHLKRL APK WML KL G FAP+P GPHK RECLPL++I+RNRLKYAL RE IL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
Q V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L ++ + EA
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEA------ 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
Q KL KV ++ +P T+DG IRYPDP DTI +++ K + IK G
Sbjct: 117 -QIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-TKPWVS 244
V+VTGG NRGR+G I E H G+F H++DA G EFATR N+F IGK V+
Sbjct: 176 KAVIVTGGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVT 235
Query: 245 LPKGKGIKLSIIEEARKRQALATS 268
+PK +G+++++I+E +R A +
Sbjct: 236 VPKQQGLRMNVIQEREERLIAAEA 259
>gi|302172081|gb|ADK97878.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172083|gb|ADK97879.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172085|gb|ADK97880.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172087|gb|ADK97881.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172105|gb|ADK97890.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172107|gb|ADK97891.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172109|gb|ADK97892.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172127|gb|ADK97901.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172129|gb|ADK97902.1| 40S ribosomal protein S4-like protein [Schiedea adamantis]
Length = 132
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/132 (87%), Positives = 126/132 (95%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLXTQKIEDFVKFDVGNV 60
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGT+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 248 GKGIKLSIIEEA 259
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|320097679|gb|ADW09574.1| putative 40S ribosomal protein S4-like protein [Schiedea
stellarioides]
Length = 132
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 127/132 (96%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGSRPWVSLPK 120
Query: 248 GKGIKLSIIEEA 259
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|320097677|gb|ADW09573.1| putative 40S ribosomal protein S4-like protein [Schiedea
stellarioides]
Length = 132
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 127/132 (96%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDATGHEFATRQGNVFIVGKGSRPWVSLPK 120
Query: 248 GKGIKLSIIEEA 259
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|302172091|gb|ADK97883.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172093|gb|ADK97884.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172117|gb|ADK97896.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172119|gb|ADK97897.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172123|gb|ADK97899.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172125|gb|ADK97900.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097691|gb|ADW09580.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097695|gb|ADW09582.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097699|gb|ADW09584.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097703|gb|ADW09586.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097709|gb|ADW09589.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097711|gb|ADW09590.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097713|gb|ADW09591.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097715|gb|ADW09592.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097755|gb|ADW09612.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097759|gb|ADW09614.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097763|gb|ADW09616.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097765|gb|ADW09617.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097767|gb|ADW09618.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097769|gb|ADW09619.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097771|gb|ADW09620.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097773|gb|ADW09621.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097775|gb|ADW09622.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097777|gb|ADW09623.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097779|gb|ADW09624.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097783|gb|ADW09626.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
Length = 132
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/132 (87%), Positives = 126/132 (95%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLYTQKIEDFVKFDVGNV 60
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGT+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 248 GKGIKLSIIEEA 259
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|223646542|gb|ACN10029.1| 40S ribosomal protein S4 [Salmo salar]
gi|223672389|gb|ACN12376.1| 40S ribosomal protein S4 [Salmo salar]
Length = 213
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 145/191 (75%), Gaps = 7/191 (3%)
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFG 139
K PAGFMDV+SI KT E+FRL+YD KGRF +H I EEA Q+KLCKV+ G
Sbjct: 30 KVVPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA-------QYKLCKVKKNLIG 82
Query: 140 QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRV 199
KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTGG N GR+
Sbjct: 83 TKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRI 142
Query: 200 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA 259
GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+L+I EE
Sbjct: 143 GIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEER 202
Query: 260 RKRQALATSAA 270
KR A ++
Sbjct: 203 DKRIAAKAGSS 213
>gi|183233913|ref|XP_001913934.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|169801348|gb|EDS89291.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449701849|gb|EMD42590.1| 40S ribosomal protein S4 [Entamoeba histolytica KU27]
Length = 197
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 141/197 (71%), Gaps = 7/197 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
ML KLGG FAPKPS GPH +ECLPLILILRNRL YAL REV I+ R + +D K+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK FKLCK+
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK-------FKLCKIEKRVL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG GR
Sbjct: 114 GTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGR 173
Query: 199 VGIIKNREKHKGSFETI 215
VG+I RE H GSFE I
Sbjct: 174 VGVIVKREVHPGSFEII 190
>gi|302505080|ref|XP_003014761.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
gi|302664454|ref|XP_003023857.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
gi|291178067|gb|EFE33858.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
gi|291187875|gb|EFE43239.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
gi|307752099|gb|ADN93070.1| putative 40S ribosomal subunit protein S4 [Arthroderma benhamiae]
Length = 215
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 155/222 (69%), Gaps = 29/222 (13%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 1 MQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEA------ 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRT---------------------IRYPDPLIKAN 164
++KL KV+ VQ G+ GIP++ T+D RT IRYPDP I+ N
Sbjct: 55 -EYKLGKVKRVQLGKGGIPFLVTHDARTRWTKVWFDSRRAWSERRWQLNIRYPDPSIRVN 113
Query: 165 DTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHE 224
DT+K+D+ T KIT+F+KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ +
Sbjct: 114 DTVKIDIATGKITDFVKFDTGVIAMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNT 173
Query: 225 FATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALA 266
FATR NVF IG+ KPWVSLPKGKG+KL+I EE +R+A+A
Sbjct: 174 FATRESNVFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRAMA 214
>gi|300121745|emb|CBK22320.2| unnamed protein product [Blastocystis hominis]
gi|300124038|emb|CBK25309.2| unnamed protein product [Blastocystis hominis]
gi|300175830|emb|CBK21826.2| unnamed protein product [Blastocystis hominis]
Length = 194
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 148/198 (74%), Gaps = 7/198 (3%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR V VD K+RTD T+PAGFMDVV++ +++ FRLLYD KGRF LH I + EA
Sbjct: 1 MQRLVKVDGKIRTDSTFPAGFMDVVTLEGSSDRFRLLYDVKGRFVLHRIDENEA------ 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
Q+KLCKV Q K IP+I T+D RTIR+PDP +K NDT+K+DL+TNK+ +KF+VG
Sbjct: 55 -QYKLCKVVKRQLSSKKIPFIVTHDARTIRFPDPTVKVNDTVKVDLKTNKVIGHVKFEVG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
N+ +T G N GRVG+I +R++H GSF+ +H++DA GHEFATRL NVF IG+G +P VSL
Sbjct: 114 NLCFITKGHNIGRVGVIVHRDRHFGSFDIVHVRDAAGHEFATRLSNVFIIGEGNQPMVSL 173
Query: 246 PKGKGIKLSIIEEARKRQ 263
PKG G+KLSIIEE R+
Sbjct: 174 PKGNGVKLSIIEEKEMRE 191
>gi|326918854|ref|XP_003205701.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
Length = 182
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 142/183 (77%), Gaps = 7/183 (3%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+SI KT E+FRL+YDTKGRF +H I EEAK +KLCKVR + G KGIP++
Sbjct: 7 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAK-------YKLCKVRKIFVGTKGIPHLV 59
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+
Sbjct: 60 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 119
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALAT 267
H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A
Sbjct: 120 HPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQ 179
Query: 268 SAA 270
S+
Sbjct: 180 SSG 182
>gi|444515837|gb|ELV10992.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 376
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/168 (65%), Positives = 135/168 (80%), Gaps = 7/168 (4%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+SI KT ENFRL+YDTKGRF +H I EEAK +KLCKVR + G KGIP++
Sbjct: 173 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAK-------YKLCKVRKIFVGTKGIPHLV 225
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+
Sbjct: 226 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 285
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 255
H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I
Sbjct: 286 HPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 333
>gi|166952347|gb|ABZ04256.1| ribosomal protein rps4 [Lineus viridis]
Length = 153
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/160 (71%), Positives = 126/160 (78%), Gaps = 7/160 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKHLKRLNAPKHWMLDKL G FAPKPS GPHK RECLPL + LRNRLKYALTY E
Sbjct: 1 MPRGPKKHLKRLNAPKHWMLDKLSGVFAPKPSCGPHKMRECLPLTIFLRNRLKYALTYDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ I+MQR + VD KVRTDK YPAGFMDVVSI KTNENFRL+YD KGRF +H I EEAK
Sbjct: 61 CVKIVMQRLIKVDGKVRTDKNYPAGFMDVVSIEKTNENFRLIYDVKGRFAIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 160
+KLCKV+ + KG+PY+ T+DGRTIRYPDPL
Sbjct: 121 -------YKLCKVKKLGVAAKGVPYVVTHDGRTIRYPDPL 153
>gi|47197900|emb|CAF89133.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 141/183 (77%), Gaps = 7/183 (3%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+SI KT E+FRL+YD KGRF +H I EEAK +KLCKV+ + G KGIP++
Sbjct: 1 DVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK-------YKLCKVKKIIIGTKGIPHLV 53
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+D RTIRYPDPLIK NDT+++DLE+ KIT+FIKFD GN+ MVTGG N GR+G+I NRE+
Sbjct: 54 THDARTIRYPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRER 113
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALAT 267
H GSF+ +H++D G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE KR A
Sbjct: 114 HPGSFDVVHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQ 173
Query: 268 SAA 270
+++
Sbjct: 174 ASS 176
>gi|47196669|emb|CAF89132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/182 (59%), Positives = 140/182 (76%), Gaps = 7/182 (3%)
Query: 89 VVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINT 148
V+SI KT E+FRL+YD KGRF +H I EEAK +KLCKV+ + G KGIP++ T
Sbjct: 1 VISIDKTGEHFRLIYDVKGRFTVHRITAEEAK-------YKLCKVKKIIIGTKGIPHLVT 53
Query: 149 YDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKH 208
+D RTIRYPDPLIK NDT+++DLE+ KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H
Sbjct: 54 HDARTIRYPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERH 113
Query: 209 KGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATS 268
GSF+ +H++D G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE KR A +
Sbjct: 114 PGSFDVVHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQA 173
Query: 269 AA 270
++
Sbjct: 174 SS 175
>gi|440493255|gb|ELQ75750.1| 40S ribosomal protein S4 [Trachipleistophora hominis]
Length = 267
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 173/272 (63%), Gaps = 7/272 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KHLKRL APK W+L K G FAP+PS+GPH+ +E +PL L+L ++L+YA T +E
Sbjct: 1 MVRGPRKHLKRLAAPKSWLLKKNVGVFAPRPSTGPHRLQESIPLSLLLTDKLQYARTGKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL +R + ++ ++RTDK +P G DV+SIPKT E++RLLY+ GRF LH I +EE+K
Sbjct: 61 VGNILKERMIKINGRIRTDKRFPVGIFDVLSIPKTGEHYRLLYNVAGRFILHQISEEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
F+L +R + +PY+ T DG + Y D I +DT+K+DLET +I++F+
Sbjct: 121 -------FRLSIIRKKLLRKGKVPYLYTNDGASFSYCDQDIVPSDTVKVDLETGRISDFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
VGN+ + GRN G VG+I N E+ +++ D G FATR NV IG
Sbjct: 174 HISVGNLAFIKKGRNMGCVGVITNIEEKGVEDCKVYLVDKKGRVFATRKVNVCVIGPDGN 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
W+SLP+ +G+KLS+ +E+ R T AA+
Sbjct: 234 SWISLPENEGVKLSVFDESNIRYEGETLKAAE 265
>gi|302420133|ref|XP_003007897.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
gi|261353548|gb|EEY15976.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
Length = 187
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 136/170 (80%), Gaps = 7/170 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M +GLKKH KRL+AP HW+LDKL G +AP+PS+GPHK R+C+PLI+ LRNRLKYAL +RE
Sbjct: 1 MGKGLKKHQKRLSAPSHWLLDKLSGTYAPRPSAGPHKLRDCMPLIVFLRNRLKYALNFRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+I+MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YD KGRF +H I+ EEA
Sbjct: 61 TRSIMMQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLD 170
++KL KV+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+D
Sbjct: 120 ------EYKLGKVKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKID 163
>gi|170574390|ref|XP_001892793.1| 40S ribosomal protein S4 [Brugia malayi]
gi|158601467|gb|EDP38373.1| 40S ribosomal protein S4, putative [Brugia malayi]
Length = 201
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 146/207 (70%), Gaps = 8/207 (3%)
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
I QR + VD KVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H I ++E
Sbjct: 2 ICKQRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEG---- 57
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 183
KLCK+ G KG+P+I T+D RTIRYPDP +K NDTI +D+ T K+++++KFD
Sbjct: 58 ---NIKLCKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFD 114
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWV 243
GN+ MVTGGRN GRVGI+ +REKH GSF+ +HI+DA H FATRL NVF IGKGTK V
Sbjct: 115 QGNLCMVTGGRNMGRVGIVGHREKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIV 174
Query: 244 SLP-KGKGIKLSIIEEARKRQALATSA 269
SLP KG++L+I EE +R A +A
Sbjct: 175 SLPGPTKGVRLTIAEERDRRLAQKRAA 201
>gi|387594076|gb|EIJ89100.1| ribosomal protein S4 [Nematocida parisii ERTm3]
gi|387595723|gb|EIJ93346.1| ribosomal protein S4 [Nematocida parisii ERTm1]
Length = 277
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 159/259 (61%), Gaps = 7/259 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G +KHLKRLNAP W+LDKLGG FAP+P GPHK RECLPL LI+R +L +A +E
Sbjct: 1 MVNGPRKHLKRLNAPNSWILDKLGGTFAPRPRCGPHKLRECLPLCLIVRRKLSFAQNTKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ IL R V VD KVR D YPAG MDVVS K +EN+RLLY+ +F L I EEAK
Sbjct: 61 VLHILNDRLVKVDGKVRKDPKYPAGVMDVVSFDKIHENYRLLYNVNKKFCLQPITKEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FKLCKV S + + I ++T DGRTI+Y DP IK D+IK DLE+ ++ F
Sbjct: 121 -------FKLCKVLSKRLEGRSILTLHTNDGRTIKYADPSIKIGDSIKFDLESGEVQGFY 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+VG G+N G VGII+ + H F ++D G + TR N+ IG +
Sbjct: 174 SLEVGKTAYAFRGKNLGCVGIIREIKVHISGFSISILEDLNGRMYTTRTDNLMVIGNAGE 233
Query: 241 PWVSLPKGKGIKLSIIEEA 259
++LPK +GI+ + + ++
Sbjct: 234 SLITLPKERGIRTNAMMDS 252
>gi|222088017|gb|ACM41869.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 173
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 136/174 (78%), Gaps = 7/174 (4%)
Query: 91 SIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYD 150
SI KT E+FRL+YD KGRF +H I EEAK +KLCKV+ + G KGIP++ T+D
Sbjct: 1 SIEKTGEHFRLIYDVKGRFTVHRITAEEAK-------YKLCKVKKIIIGTKGIPHLVTHD 53
Query: 151 GRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKG 210
RTIRYPDPLIK NDTI++DL+T KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H G
Sbjct: 54 ARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 113
Query: 211 SFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 264
SF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE KR A
Sbjct: 114 SFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLA 167
>gi|321448588|gb|EFX61505.1| hypothetical protein DAPPUDRAFT_304892 [Daphnia pulex]
Length = 176
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 137/185 (74%), Gaps = 10/185 (5%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR + VD +VRTD YPAGFMDV++I T E FRL+Y+ KG F +H I E
Sbjct: 1 MQRLIKVDGEVRTDSNYPAGFMDVITIDNTGEYFRLVYNVKGCFAIHRITAE-------- 52
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLCKVR VQ G KGIP+I T+DGRTIRYPDPL+K NDTI+LD+ TNKI +FIKFD G
Sbjct: 53 --YKLCKVRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSG 110
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
N+ M+ GG N GRVG NRE++ GSF+ H++DALGH FATRL NVF IGKG+K ++SL
Sbjct: 111 NLWMIIGGCNLGRVGTTINRERYPGSFDIAHVKDALGHLFATRLNNVFIIGKGSKAYISL 170
Query: 246 PKGKG 250
P+ KG
Sbjct: 171 PRDKG 175
>gi|429964745|gb|ELA46743.1| hypothetical protein VCUG_01769 [Vavraia culicis 'floridensis']
Length = 267
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 171/272 (62%), Gaps = 7/272 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KHLKRL APK W+L K G FAP+PS+GPH+ E +PL L+L ++L+YA T +E
Sbjct: 1 MVRGPRKHLKRLAAPKSWLLKKNKGVFAPRPSTGPHRLEESIPLSLLLTDKLQYARTAKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL ++ + ++ ++RTDK +P G DV+SIPKT E++RL+Y+ GRF LH I +EE+K
Sbjct: 61 VGNILKEKMIKINGRIRTDKRFPVGIFDVLSIPKTGEHYRLMYNVAGRFILHQIGEEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
F+L VR + + +PY+ T DG + Y D I DT+K+DLET +I+E +
Sbjct: 121 -------FRLAIVRKKRLRKGKVPYLYTNDGGSFSYCDQDIVPGDTVKVDLETGRISEHL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+GN+ + GRN G VG++ N E+ +++ D FATR NV+ IG
Sbjct: 174 HVAIGNLAFIKKGRNMGCVGVVTNIEEKGIGDRKVYLVDKKERVFATRQVNVYVIGPDGS 233
Query: 241 PWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
W+SLP+G G+KLS+ +E+ R T AA+
Sbjct: 234 SWISLPEGDGVKLSVFDESNIRYEGETVKAAE 265
>gi|378755999|gb|EHY66024.1| ribsomal protein S4 [Nematocida sp. 1 ERTm2]
Length = 278
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 158/259 (61%), Gaps = 7/259 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G +KHLKRLNAP W+LDKLGG FAP+P GPHK RECLPL LI+R +L +A +E
Sbjct: 1 MVNGPRKHLKRLNAPNSWILDKLGGTFAPRPRCGPHKLRECLPLCLIVRRKLSFAQNTKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V+ IL R V VD K+R D YPAG MDV+S K +EN+RLLY+ +F L I EEAK
Sbjct: 61 VLHILNDRLVKVDGKIRKDPKYPAGIMDVISFDKIHENYRLLYNVNQKFCLQPITKEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
FK+CKV + + + I ++T DGRTI+Y DP I D++K +LET ++ E
Sbjct: 121 -------FKICKVLAKRLEGRSILTLHTNDGRTIKYADPSINIGDSVKFNLETGEVMESF 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
VGN G+N G VGII+ + H F ++D G + TR N+ IG +
Sbjct: 174 PLKVGNTAYAFRGKNLGCVGIIREVKVHISGFTISILEDLNGRMYTTRTDNLMAIGTAGE 233
Query: 241 PWVSLPKGKGIKLSIIEEA 259
++LPK +GI+ + + E+
Sbjct: 234 SLITLPKERGIRTNALMES 252
>gi|414868249|tpg|DAA46806.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 194
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 140/216 (64%), Gaps = 61/216 (28%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLK L+APKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RN LKYALTY EV
Sbjct: 32 ARGLKKHLKSLSAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNMLKYALTYCEV 91
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ILMQRHVLVD K +S P + R++ G FRLH IRDE+A
Sbjct: 92 ISILMQRHVLVDGK--------------MSFPSLRQT-RII----GCFRLHPIRDEDA-- 130
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
KANDTIK+DLETNKI +FIK
Sbjct: 131 ----------------------------------------KANDTIKIDLETNKIMDFIK 150
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
FD+GNVVMVTGGRN VG+IKNREKHKGSFETIH+
Sbjct: 151 FDIGNVVMVTGGRNTRHVGVIKNREKHKGSFETIHV 186
>gi|189484003|gb|ACE00295.1| ribosomal protein S4 [Caenorhabditis brenneri]
Length = 177
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 134/183 (73%), Gaps = 7/183 (3%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG KKHLKRL APKHWMLDKLGG FA +P+ GPHK RE LPL L LRNRLKYAL Y E
Sbjct: 2 RGPKKHLKRLAAPKHWMLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAK 61
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
IL QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA
Sbjct: 62 KILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEA--- 118
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKLCKV+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+F+KF
Sbjct: 119 ----DFKLCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKF 174
Query: 183 DVG 185
+ G
Sbjct: 175 EPG 177
>gi|323304664|gb|EGA58427.1| Rps4bp [Saccharomyces cerevisiae FostersB]
Length = 167
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 133/172 (77%), Gaps = 7/172 (4%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEA------ 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G
Sbjct: 55 -SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
+V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+
Sbjct: 114 KLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGE 165
>gi|431915230|gb|ELK15917.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 204
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 137/194 (70%), Gaps = 7/194 (3%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
M DKL G FA PS+ PHK RECLPLI+ LRNRLK AL E I MQR + +D +V T
Sbjct: 1 MQDKLMGVFATHPSTSPHKLRECLPLIVFLRNRLKCALIGDEDKKICMQRFIKIDGQVWT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGFMD +SI KT ENFRL+YDTKG F +H I EEAK +KLCKVR +
Sbjct: 61 DVTYPAGFMDDISIDKTGENFRLVYDTKGCFPVHQITSEEAK-------YKLCKVRKIFV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T TIRY +PLIK NDTI++ LET +IT+FIKFD GN+ VTGG N G+
Sbjct: 114 GTKGIPHLVTDGAHTIRYSNPLIKVNDTIQIYLETGEITDFIKFDTGNMHTVTGGANLGK 173
Query: 199 VGIIKNREKHKGSF 212
+G+I NRE+H GS
Sbjct: 174 IGVITNRERHPGSL 187
>gi|255710091|gb|ACU30865.1| 40S ribosomal protein S4 [Ochlerotatus triseriatus]
Length = 178
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 140/186 (75%), Gaps = 9/186 (4%)
Query: 85 GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIP 144
GFMDV++I KT+ENFRL+YD KGRF +H I EEAK +KL KV+ VQ G K +P
Sbjct: 1 GFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAK-------YKLLKVKRVQIGPKKVP 53
Query: 145 YINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKN 204
+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +KF+ GN+ M+TGGRN GRVG +
Sbjct: 54 FILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRVGTVIQ 113
Query: 205 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 264
REKH GSFE +HI+D+ GH FATRL NVF IGK TK ++SLPKGKG+KLSI EE +R
Sbjct: 114 REKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKATKAFISLPKGKGVKLSIAEERDRR-- 171
Query: 265 LATSAA 270
LA+ AA
Sbjct: 172 LASKAA 177
>gi|4432937|dbj|BAA21076.1| Y-chromosome linked ribosomal protein S4 [Macaca fuscata]
Length = 165
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 130/172 (75%), Gaps = 7/172 (4%)
Query: 49 RNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 108
RNRLKYALT EV I MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGR
Sbjct: 1 RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 60
Query: 109 FRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIK 168
F +H I EEAK +KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT++
Sbjct: 61 FAVHRITVEEAK-------YKLCKVRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQ 113
Query: 169 LDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDA 220
+DL T KI FIKF+ GNV MV GG N GRVG+I NRE+H GSF+ +H++DA
Sbjct: 114 IDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 165
>gi|219880767|gb|ACL51658.1| ribosomal protein S4 Y-linked 1 [Callithrix jacchus]
Length = 153
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/160 (66%), Positives = 124/160 (77%), Gaps = 7/160 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHL+RL APKHWMLDKL G FAP+PS+GPH+ RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLRRLVAPKHWMLDKLTGVFAPRPSTGPHRLRECLPLIVFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVR D TYP G MDV+SI KT E+FRL+YDTKGRF +H IR EEA
Sbjct: 61 VKKICMQRFIRIDGKVRVDITYPVGLMDVISIEKTGEHFRLVYDTKGRFAVHRIRVEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 160
++KLCKVR + G KGIP++ T+D RTIRYPDP+
Sbjct: 120 ------EYKLCKVRKITMGTKGIPHLVTHDARTIRYPDPV 153
>gi|119632118|gb|EAX11713.1| hCG38986, isoform CRA_a [Homo sapiens]
Length = 160
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 127/167 (76%), Gaps = 7/167 (4%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQ + +D KVR
Sbjct: 1 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRV 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H I EEAK +KLCKVR +
Sbjct: 61 DITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK-------YKLCKVRKITV 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD G
Sbjct: 114 GTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTG 160
>gi|351708512|gb|EHB11431.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 224
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 144/229 (62%), Gaps = 33/229 (14%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G FAP+PS+ HK RECLPLI+ LRNRL YALT EV I MQ + VD KV+T
Sbjct: 1 MLDKLTGVFAPRPSTSSHKLRECLPLIIFLRNRLNYALT-SEVKKICMQHFIKVDDKVQT 59
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D T G F +H I EEAK +KLCKVR +
Sbjct: 60 DIT-------------------------GHFAIHHITPEEAK-------YKLCKVRKICV 87
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKFD GN+ MVTGG N G+
Sbjct: 88 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGK 147
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
+G+I NR++H GSF+ H++DA + FAT+L ++ + K P+
Sbjct: 148 IGVITNRKRHPGSFDVAHVKDANDNRFATQLSHILLLAKAINHGFLFPE 196
>gi|444708012|gb|ELW49140.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 177
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 131/184 (71%), Gaps = 7/184 (3%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
MDV+SI KT ENF L+YD KGR +H I EEAK +KLCK+R + G KGIP++
Sbjct: 1 MDVISIDKTRENFHLIYDIKGRVAVHCITPEEAK-------YKLCKMRKIFVGTKGIPHL 53
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
T+D TI YPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG N R+G+I NRE
Sbjct: 54 VTHDAHTICYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGHANLKRIGVITNRE 113
Query: 207 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALA 266
+H GSF+ H++D G+ FAT+ N+F I KG KPWV LP+GKGI+L+I EE KR A
Sbjct: 114 RHPGSFDVAHVKDPNGNSFATQPSNIFVISKGNKPWVYLPRGKGIRLTIAEERDKRLAAK 173
Query: 267 TSAA 270
S+
Sbjct: 174 QSSG 177
>gi|290561513|gb|ADD38157.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
Length = 266
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 161/259 (62%), Gaps = 7/259 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKH+KR+ AP+ WM++K+GG + +P+ GPHK RE LPL ++LR++L A E
Sbjct: 1 MARGPKKHMKRITAPRSWMMNKMGGVYTVRPAQGPHKRRESLPLQIVLRDKLGLAFNGTE 60
Query: 61 VIAILMQRH--VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
IL Q+ V VD K+R + YP G MDV+ +PK +R+ YD KGRF+L + +
Sbjct: 61 CYKILKQKEGLVRVDQKIRREPKYPVGLMDVIDLPKCGLAYRVFYDVKGRFKLMPLEKKT 120
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 178
+ +K+C++ I Y+ ++DGRT+RY D + +D++KL+L TN+I +
Sbjct: 121 NEQ-----NYKICRIVKKSVANNKIGYLISHDGRTLRYVDGAVMVHDSVKLNLSTNEIED 175
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
I GN +++ G NRGR+GII +K GS++ + ++DA G F TR+ V IG G
Sbjct: 176 HIPLQNGNKALISHGNNRGRIGIIHQIKKFPGSYDLVTLKDARGTTFTTRIDYVMPIGVG 235
Query: 239 TKPWVSLPKGKGIKLSIIE 257
K ++SLP +G+K +I+E
Sbjct: 236 NKTFLSLPAEEGVKKTILE 254
>gi|47935075|gb|AAT39884.1| ribosomal protein S4 [Branchiostoma belcheri tsingtauense]
Length = 158
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 124/165 (75%), Gaps = 7/165 (4%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR + VD KVRTD+ YPAGFMDV++I KT ENFRL+YD KGRF +H I EEAK
Sbjct: 1 MQRLIKVDGKVRTDRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAK----- 55
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLCKVR V G KGIP + T+D RTIRYPDP I+ ND++++D+ T KIT+ IKFD G
Sbjct: 56 --YKLCKVRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTG 113
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLG 230
NV MVTGGRN GRVG++ NRE+H GSF+ +H++D H FATRL
Sbjct: 114 NVCMVTGGRNLGRVGLVTNRERHPGSFDIVHVKDTASHTFATRLA 158
>gi|38047855|gb|AAR09830.1| similar to Drosophila melanogaster RpS4, partial [Drosophila
yakuba]
Length = 150
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 121/157 (77%), Gaps = 7/157 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYPAG+MD++++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 157
+KLCKV+ Q G KG+P++ T+DGRTIRYP
Sbjct: 121 -------YKLCKVKKTQLGAKGVPFLVTHDGRTIRYP 150
>gi|241710443|ref|XP_002413398.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
gi|215507212|gb|EEC16706.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
Length = 160
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 121/158 (76%), Gaps = 7/158 (4%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
AP+PS+GPHK RE LPLI++LRNRLKYALT EV I+ QR + VD KVRTD YPAGFM
Sbjct: 1 APRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRTDTNYPAGFM 60
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DVV+I KT E FRLLYD KGRF LH I EEAK +KLC+V+ VQ G KG+P++
Sbjct: 61 DVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAK-------YKLCRVKRVQVGPKGVPFLT 113
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
T+D RTIRYPDPLIK NDT+K+DL T KI ++IKFD G
Sbjct: 114 THDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSG 151
>gi|402468372|gb|EJW03536.1| hypothetical protein EDEG_02120 [Edhazardia aedis USNM 41457]
Length = 274
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 160/259 (61%), Gaps = 9/259 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG +KHLKRL APK WML K GG FA P+ GPH+ RE +PL L+L+ A T +E
Sbjct: 1 MARGPRKHLKRLAAPKSWMLSKTGGIFATNPNCGPHRKRESIPLALLLKKLNL-AATRKE 59
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
IL ++ + V+ +VR+++ YP G DV++I TN ++RLLY+ RF LH I ++EA
Sbjct: 60 EDYILSKKMIKVNGRVRSERKYPVGLFDVLTIQPTNTSYRLLYNITKRFYLHKIDEKEA- 118
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+LCKVRS + G+PY+ T DG R+ P I DT+K+D+ +NK+ + I
Sbjct: 119 ------NVRLCKVRSKKV-VNGVPYVFTEDGMCYRFLSPNIDKKDTLKIDVNSNKVIDSI 171
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF G + MVT G N G VG+I E H+ + ++++D +G FATR NVF +G
Sbjct: 172 KFSSGKLAMVTRGNNMGCVGVIVKIETHEIGTDLVYLKDKVGRNFATRGSNVFVVGTTKD 231
Query: 241 PWVSLPKGKGIKLSIIEEA 259
W+SLP G G+K S E++
Sbjct: 232 TWISLPHGLGVKTSEYEKS 250
>gi|323332920|gb|EGA74323.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
Length = 164
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/165 (60%), Positives = 126/165 (76%), Gaps = 7/165 (4%)
Query: 100 RLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP 159
RL+YD KGRF +H I DEEA +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP
Sbjct: 3 RLVYDVKGRFAVHRITDEEA-------SYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDP 55
Query: 160 LIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQD 219
IK NDT+K+DL + KIT+FIKFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D
Sbjct: 56 NIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKD 115
Query: 220 ALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 264
+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE +R+A
Sbjct: 116 SLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRA 160
>gi|402593341|gb|EJW87268.1| ribosomal protein S4e [Wuchereria bancrofti]
Length = 197
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 127/178 (71%), Gaps = 8/178 (4%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+ I KTNE FRLLYD KGR+ H I ++E KLCK+ G KG+P+I
Sbjct: 22 DVIRIEKTNETFRLLYDAKGRYATHRITEQEG-------NIKLCKIVRKCVGPKGVPFIV 74
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+D RTIRYPDP +K NDTI +D+ T K+++++KFD GN+ MVTGGRN GRVGI+ +REK
Sbjct: 75 THDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHREK 134
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP-KGKGIKLSIIEEARKRQA 264
H GSF+ +HI+DA H FATRL NVF IGKGTK VSLP KG++L+I EE +R A
Sbjct: 135 HPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVRLTIAEERDRRLA 192
>gi|209737924|gb|ACI69831.1| 40S ribosomal protein S4 [Salmo salar]
Length = 172
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 99/153 (64%), Positives = 113/153 (73%), Gaps = 7/153 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT 153
Q+KLCKV+ G KG+P T R+
Sbjct: 120 ------QYKLCKVKKNLMGTKGVPATQTPSSRS 146
>gi|83773390|dbj|BAE63517.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 146
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 117/153 (76%), Gaps = 7/153 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KH KRL+AP HW+LDK+ G +APK S GPHK R+CLPLI+ +RNRLKYAL RE
Sbjct: 1 MPRGPTKHQKRLSAPSHWLLDKMSGTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V AI+MQR + VD KVRTD T+PAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA
Sbjct: 61 VKAIMMQRLIQVDGKVRTDPTFPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT 153
++KLCKV+ VQ G+ GIP++ T+D RT
Sbjct: 120 ------EYKLCKVKRVQLGKGGIPFLVTHDART 146
>gi|410043724|ref|XP_003951666.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pan
troglodytes]
Length = 153
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 116/160 (72%), Gaps = 7/160 (4%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
MDV+SI K ENF L+YDTK F +H I E AK +KLCKVR + G KGIP++
Sbjct: 1 MDVISIDKMRENFCLIYDTKSCFDVHLITPEVAK-------YKLCKVRKIFVGTKGIPHL 53
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
T+D TI Y DPLIK NDTI++DLET KIT+FIKFD G + MVTGG N R+G+I NRE
Sbjct: 54 VTHDAHTIHYLDPLIKVNDTIQIDLETGKITDFIKFDAGKLCMVTGGANLERIGVITNRE 113
Query: 207 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 246
+H GSF+ +H++DA G+ FA RL N+F IGKG KPW+SLP
Sbjct: 114 RHPGSFDVVHVKDANGNSFAARLSNIFVIGKGNKPWISLP 153
>gi|148691067|gb|EDL23014.1| mCG3585 [Mus musculus]
Length = 157
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 113/149 (75%), Gaps = 7/149 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G KKHLK ++APKHWMLDKL G FAP+PS+GPHK RECLP I+ LRNRLKYALT E
Sbjct: 1 MAPGPKKHLKHVSAPKHWMLDKLTGVFAPRPSTGPHKLRECLPPIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKEICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTY 149
+KLCKVR + G KGI ++ T+
Sbjct: 121 -------YKLCKVRKIFVGTKGILHLVTH 142
>gi|431916529|gb|ELK16507.1| Contactin-5, partial [Pteropus alecto]
Length = 713
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 119/162 (73%), Gaps = 8/162 (4%)
Query: 88 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
DV+SI KT ENF +YDTKG F +H I EEAK +KLCK+R + G+K + ++
Sbjct: 347 DVISIDKTRENFLQIYDTKGLFAVH-ITPEEAK-------YKLCKMRKIFVGRKELLHLV 398
Query: 148 TYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREK 207
T+D TIR PDPLIK NDTI++DLET KI EFIKFD N+ MVTGG N GR+G+I NRE+
Sbjct: 399 THDAGTIRCPDPLIKVNDTIQIDLETEKIIEFIKFDTDNLFMVTGGDNLGRIGVITNRER 458
Query: 208 HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 249
H GSF+ +H++DA G+ FAT L N+F IGKG KPW+SLP GK
Sbjct: 459 HPGSFDLVHVKDANGNNFATWLSNIFVIGKGNKPWISLPHGK 500
>gi|225714340|gb|ACO13016.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
gi|290462551|gb|ADD24323.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
Length = 265
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 149/258 (57%), Gaps = 8/258 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KHLKRL AP WML K G +AP+ SSGPHK E +PL ++L +LK A T +E
Sbjct: 1 MVRGPRKHLKRLYAPTSWMLKKSEGRYAPRISSGPHKKDESIPLRILLSKKLKIASTSKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V IL R + V+ VRTDK +P G D +++ + RLLY+T G+F L I E++
Sbjct: 61 VEYILRNRMIKVNNNVRTDKDFPVGIFDTLTVGDNKDFLRLLYNTDGKFVLKRISKEDSM 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
K+ KVR + +PY+ T DG R+ D IK N T+K+D ETNKI +F+
Sbjct: 121 T-------KIVKVRETAIRKGNVPYVYTMDGCCYRFCDQNIKKNFTVKIDFETNKIVKFL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
K VG++V G+NRG VG + E+++ S I IQD G EF+T + IG
Sbjct: 174 KLVVGSIVFTINGKNRGSVGKVIGIEENEYSENIIKIQDFNGREFSTIESSTICIGNKVD 233
Query: 241 PW-VSLPKGKGIKLSIIE 257
+ + L KGIK SI+E
Sbjct: 234 NYEIQLLDTKGIKKSILE 251
>gi|332213865|ref|XP_003256051.1| PREDICTED: 40S ribosomal protein S4, Y isoform 2-like [Nomascus
leucogenys]
Length = 170
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 109/143 (76%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N+T+++DL T KIT FIKFD GNV
Sbjct: 28 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNNTVQIDLGTGKITSFIKFDTGNV 87
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
MV GG N GRVG++ NRE+H GS +H++DA G+ FATR+ N+F IG G KPW+SLP+
Sbjct: 88 CMVIGGANLGRVGVVTNRERHPGSCNVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 147
Query: 248 GKGIKLSIIEEARKRQALATSAA 270
GKGI+L+I EE KR A S+
Sbjct: 148 GKGIRLTIAEEREKRLAAKQSSG 170
>gi|401827348|ref|XP_003887766.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
gi|392998773|gb|AFM98785.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
Length = 268
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 165/272 (60%), Gaps = 12/272 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M+ G + HLKR APK WMLDK GG FA P+SGPH+ EC+PL ++ LKYA +E
Sbjct: 1 MSTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHRKTECIPLGYLISRFLKYASNSKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ IL +++ V+ K RT+ +P G DV+SI KT E+FR+LY+ + +F LH I EEAK
Sbjct: 61 LAIILKGKNIKVNGKARTNSHFPVGLFDVISIEKTGEHFRVLYNVQKKFHLHRINSEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++L KV + ++ +GIPY+ + G +IR+ DP I+ TIK+ ET+K+ E+I
Sbjct: 121 -------YRLAKV-TKKYKYQGIPYVVSSCGLSIRFCDPAIEQEYTIKISNETSKVIEYI 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
V +V V+ G+ RGR+GII E +G + D G+ F+ + IG+ ++
Sbjct: 173 APGVDKIVFVSRGKARGRIGIINTIEV-QGKDTVYVMTDFAGNTFSCTSKSCIIIGESSE 231
Query: 241 P-WVSLPKGKGIKLSIIEE--ARKRQALATSA 269
++LP KGI+LS +E+ A+ + + TSA
Sbjct: 232 NILITLPSEKGIRLSELEKINAQLGEMIDTSA 263
>gi|19173414|ref|NP_597217.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
gi|74621136|sp|Q8SRB9.1|RS4_ENCCU RecName: Full=40S ribosomal protein S4
gi|19171003|emb|CAD26393.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
Length = 268
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 157/259 (60%), Gaps = 10/259 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G + HLKR APK WMLDK GG FA P+SGPHK EC+PL ++ L+YA ++E
Sbjct: 1 MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ IL ++++ V+ +VRT+ +P G DVVSI KT E+FR+LY+ +F LH I EEA
Sbjct: 61 LSIILAEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++L KV + ++ +GIPYI + G +IR+ DP I TIK+ ET+K+ E+I
Sbjct: 120 ------SYRLTKV-TKKYENQGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYI 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
V+ V+ G+ RGRVG+I N +G + D G+ F+ + IG+ ++
Sbjct: 173 VPGPDKVIFVSRGKARGRVGVI-NTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSE 231
Query: 241 P-WVSLPKGKGIKLSIIEE 258
W++LPK +GI+ S +E+
Sbjct: 232 NIWITLPKERGIRQSELEK 250
>gi|160948194|emb|CAO94698.1| putative ribosomal protein S4 [Pomphorhynchus laevis]
Length = 137
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 109/144 (75%), Gaps = 7/144 (4%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
RG +KHLKR+ APKHWMLDKLGG FAPKPS GPHK RECLPL++ LRNRL YALTY E
Sbjct: 1 RGQRKHLKRVAAPKHWMLDKLGGVFAPKPSQGPHKMRECLPLLIFLRNRLGYALTYDEAR 60
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I QR + VD KVRTD +P+GFMDV++I KTNENFRL+YD KGRF +H I +EEA
Sbjct: 61 KICKQRDIKVDGKVRTDFRFPSGFMDVITIDKTNENFRLIYDVKGRFVVHRITNEEA--- 117
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYI 146
+KLC+V + Q G KG+P++
Sbjct: 118 ----SYKLCQVTNAQTGFKGVPFL 137
>gi|449328827|gb|AGE95103.1| 40S ribosomal protein S4 [Encephalitozoon cuniculi]
Length = 268
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 157/259 (60%), Gaps = 10/259 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G + HLKR APK WMLDK GG FA P+SGPHK EC+PL ++ L+YA ++E
Sbjct: 1 MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ IL ++++ V+ +VRT+ +P G DVVSI KT E+FR+LY+ +F LH I EEA
Sbjct: 61 LSIILDEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++L KV + ++ +GIPYI + G +IR+ DP I TIK+ ET+K+ E+I
Sbjct: 120 ------SYRLTKV-TKKYENQGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYI 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
V+ V+ G+ RGRVG+I N +G + D G+ F+ + IG+ ++
Sbjct: 173 VPGPDKVIFVSKGKARGRVGVI-NTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSE 231
Query: 241 P-WVSLPKGKGIKLSIIEE 258
W++LPK +GI+ S +E+
Sbjct: 232 NIWITLPKERGIRQSELEK 250
>gi|396081888|gb|AFN83502.1| 40S ribosomal protein S4 [Encephalitozoon romaleae SJ-2008]
Length = 268
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 161/260 (61%), Gaps = 12/260 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G + HLKR AP+ WMLDK GG FA P+SGPH+ EC+PL ++ LKYA +E
Sbjct: 1 MPTGHRDHLKRKTAPESWMLDKQGGTFALMPASGPHRKTECIPLGYLISRFLKYAGNSKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ +L +++ V+ KVRT+ +P G DV+SI KT E+FR+LY+T +F LH I +EA
Sbjct: 61 LGIVLGGKNIKVNGKVRTNSHFPVGLFDVISIEKTGEHFRVLYNTHKKFHLHKISSQEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++L KV + ++ +GIPY+ + G +IR+ DP I+ TIK+ ET+K+ E I
Sbjct: 120 ------GYRLAKV-TKKYTSRGIPYVVSSCGLSIRFCDPAIEQEYTIKISNETSKVVEHI 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQ-DALGHEFATRLGNVFTIGKGT 239
V VV V+ G+ RGR+G+I N +G ET+++ D G+ F+ + IG+ +
Sbjct: 173 APGVDKVVFVSRGKARGRIGVI-NTIDVQGK-ETVYVMTDFAGNTFSCTSKSCIIIGESS 230
Query: 240 KP-WVSLPKGKGIKLSIIEE 258
+ W++LPK GI+LS +E+
Sbjct: 231 ENIWITLPKENGIRLSELEK 250
>gi|432102129|gb|ELK29938.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 183
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 123/169 (72%), Gaps = 9/169 (5%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQ + ++ KV+TD TYPAGF+DV+SI KT EN RL+YDTK RF +H R EEAK
Sbjct: 1 MQWFIEINGKVQTDVTYPAGFVDVISIDKTGENVRLVYDTKSRFAVHR-RPEEAK----- 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLCKVR + G KGIP++ T D RTIRYP+PLIK NDTI++DLE+ KIT+FI D G
Sbjct: 55 --YKLCKVRKIFMGTKGIPHLVTQDARTIRYPEPLIKVNDTIQIDLESGKITDFITLDTG 112
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVF 233
+ M+T G N G++G+I +REKH GSF+ I H++ A G+ FAT L N+F
Sbjct: 113 KLCMITRGANLGKIGVITDREKHPGSFDIIVHVKYATGNSFATLLSNIF 161
>gi|440904091|gb|ELR54652.1| hypothetical protein M91_21175, partial [Bos grunniens mutus]
Length = 130
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/137 (66%), Positives = 107/137 (78%), Gaps = 7/137 (5%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQ + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 1 MQHFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAK----- 55
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD G
Sbjct: 56 --YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG 113
Query: 186 NVVMVTGGRNRGRVGII 202
N+ MVTGG N GR+G+I
Sbjct: 114 NLCMVTGGANLGRIGVI 130
>gi|379072624|gb|AFC92944.1| ribosomal protein S4, X-linked, partial [Pipa carvalhoi]
Length = 129
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 106/128 (82%)
Query: 141 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 200
KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTGG N GR+G
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61
Query: 201 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAR 260
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERD 121
Query: 261 KRQALATS 268
KR A S
Sbjct: 122 KRLAAKQS 129
>gi|91694809|gb|ABE41835.1| ribosomal protein S4 [Marmota monax]
Length = 120
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/120 (75%), Positives = 99/120 (82%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|379072626|gb|AFC92945.1| ribosomal protein S4, X-linked, partial [Rhinophrynus dorsalis]
Length = 129
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 105/128 (82%)
Query: 141 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 200
KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GRVG
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRVG 61
Query: 201 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAR 260
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERG 121
Query: 261 KRQALATS 268
KR A S
Sbjct: 122 KRLAAKQS 129
>gi|431897155|gb|ELK06417.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 155
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 112/159 (70%), Gaps = 12/159 (7%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA GLKKHLK + AP HWMLDKL G FAP+PS+GPHK ECLP I+ LRNRLKYALT E
Sbjct: 6 MAGGLKKHLKCVAAPTHWMLDKLTGMFAPRPSTGPHKLGECLPPIIFLRNRLKYALTGDE 65
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I QR + +D KVRTD TYPAGFMD +SI KT ENFRL+Y TK RF +H I EEA
Sbjct: 66 V-KICRQRFINIDGKVRTDMTYPAGFMDAISINKTRENFRLVYGTKCRFAVHRITTEEA- 123
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP 159
+KLCKVR + G K +P +D RTIRYP+P
Sbjct: 124 ------DYKLCKVRKIFVGTKKVP----HDPRTIRYPNP 152
>gi|379072628|gb|AFC92946.1| ribosomal protein S4, X-linked, partial [Hymenochirus curtipes]
Length = 129
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 105/128 (82%)
Query: 141 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 200
KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61
Query: 201 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAR 260
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 121
Query: 261 KRQALATS 268
KR A S
Sbjct: 122 KRLAAKQS 129
>gi|255641952|gb|ACU21243.1| unknown [Glycine max]
Length = 123
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/103 (86%), Positives = 94/103 (91%)
Query: 169 LDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 228
LDLE+NKIT+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR
Sbjct: 21 LDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATR 80
Query: 229 LGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAAA 271
+GNVF IGKGTKPWVSLPKGKGIKLSIIEEARKR A A
Sbjct: 81 MGNVFIIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQNETVA 123
>gi|221039598|dbj|BAH11562.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/123 (72%), Positives = 99/123 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KVRTD TYPAG MDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGLMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALI 123
+
Sbjct: 121 VSV 123
>gi|444732233|gb|ELW72539.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 512
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/158 (61%), Positives = 112/158 (70%), Gaps = 8/158 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK + PKH MLDKL G FAP+PS+GP K RECL I+ LRNRLK ALT E
Sbjct: 1 MARGPKKHLKWVAVPKHQMLDKLTGVFAPRPSTGP-KLRECLSFIIFLRNRLKNALTGDE 59
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + +D KV TD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +EAK
Sbjct: 60 VKKICMQRFIKIDGKVCTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRNTPQEAK 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD 158
+KLCKVR + G +GIP + T+D TI YPD
Sbjct: 120 -------YKLCKVRKIFVGTEGIPRLVTHDAHTICYPD 150
>gi|303390290|ref|XP_003073376.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
gi|303302522|gb|ADM12016.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
Length = 268
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 153/258 (59%), Gaps = 10/258 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G + HLKR APK WML+K GG FA P+SGPH+ EC+PL ++ LKY+ +E
Sbjct: 1 MPTGHRDHLKRKTAPKSWMLNKQGGTFAMMPASGPHRKTECIPLGYLISRFLKYSSNSKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ IL ++V V+ KVRT+ +P G DVVSI KT E+FR+LY+ +F LH I EA
Sbjct: 61 LRIILDGKNVKVNGKVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRINSSEA- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
++L KV + ++ + +PY+ + G +IR+ DP I TIK+ ET+K+ E+I
Sbjct: 120 ------SYRLAKV-TKKYESQNVPYVVSSCGLSIRFCDPAIDVGYTIKISNETSKVIEYI 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
+ V VV V+ G+ RGR+G+I N +G + D GH F+ + IG+ +
Sbjct: 173 EPGVDKVVFVSSGKARGRIGVI-NTISIQGKEVVYGMTDFAGHTFSCTSKSCILIGESEE 231
Query: 241 P-WVSLPKGKGIKLSIIE 257
++LPK +GI+LS +E
Sbjct: 232 NILITLPKERGIRLSSLE 249
>gi|67621222|ref|XP_667747.1| 40S ribosomal protein S4 [Cryptosporidium hominis TU502]
gi|54658904|gb|EAL37512.1| 40S ribosomal protein S4 [Cryptosporidium hominis]
Length = 152
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 111/159 (69%), Gaps = 7/159 (4%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL G +AP+PSSGPHK REC+PL ++LRNRLK+ALTY E I+MQR + VD KVRT
Sbjct: 1 MLDKLTGVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEAKYIVMQRLIKVDGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D +P G MDVVSI + +N R++YDTKGRF I +EA FKLCKV V
Sbjct: 61 DICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEA-------GFKLCKVTKVAL 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 177
G KGIP T D RT+RY P +KANDT+K+DL T K++
Sbjct: 114 GAKGIPTATTNDARTLRYIHPDVKANDTVKVDLATGKVS 152
>gi|342906104|gb|AEL79335.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 132
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 106/131 (80%)
Query: 132 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 191
KV+ VQ G +GIP++ T+DGRTIRYPDPL K NDTI+LD+ T+KI + I+ D GN+ M+T
Sbjct: 2 KVKKVQTGPRGIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMIT 61
Query: 192 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGI 251
GGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG+K +VSLPKGKG+
Sbjct: 62 GGRNLGRVGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGV 121
Query: 252 KLSIIEEARKR 262
KLSI EE KR
Sbjct: 122 KLSIAEERDKR 132
>gi|413925809|gb|AFW65741.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 140
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 89/96 (92%)
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
L++ QFKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI
Sbjct: 37 LLVCVQFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIN 96
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
FDVGNVVMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 97 FDVGNVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 132
>gi|82393859|gb|ABB72228.1| ribosomal protein S4 X-linked [Bos taurus]
Length = 127
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 103/130 (79%), Gaps = 7/130 (5%)
Query: 72 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLC 131
+D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK +KLC
Sbjct: 4 IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK-------YKLC 56
Query: 132 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 191
KVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVT
Sbjct: 57 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 116
Query: 192 GGRNRGRVGI 201
GG N GR+G+
Sbjct: 117 GGANLGRIGV 126
>gi|449471049|ref|XP_004153193.1| PREDICTED: 40S ribosomal protein S4-like, partial [Cucumis sativus]
Length = 102
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/101 (89%), Positives = 93/101 (92%), Gaps = 3/101 (2%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLL 102
IAILMQRHVLVDAKVRTDKTYPAGFM ++ +N N LL
Sbjct: 62 IAILMQRHVLVDAKVRTDKTYPAGFMGMLI---SNSNSILL 99
>gi|297694118|ref|XP_002824341.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pongo abelii]
Length = 134
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 108/141 (76%), Gaps = 7/141 (4%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
M+V+SI KT ENF L+YDTK F +H I EEAK +KLCKVR + G KGIP++
Sbjct: 1 MEVISIDKTEENFCLIYDTKSLFAVHHITPEEAK-------YKLCKVRKIFLGTKGIPHL 53
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
T+DGRTI YPDPLIK NDTI++DLET+KIT+FIKFD G++ MVTG N GR+G+I NRE
Sbjct: 54 VTHDGRTIHYPDPLIKVNDTIQIDLETSKITDFIKFDTGHLCMVTGSANLGRIGVITNRE 113
Query: 207 KHKGSFETIHIQDALGHEFAT 227
+H GSF+ IH++DA G+ FAT
Sbjct: 114 RHPGSFDIIHMKDANGNSFAT 134
>gi|291410370|ref|XP_002721473.1| PREDICTED: ribosomal protein S4, X-linked-like [Oryctolagus
cuniculus]
Length = 291
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 119/199 (59%), Gaps = 8/199 (4%)
Query: 72 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLC 131
+ V+T YPAGF+DV+S K ENF L DTKG F +H I EEAK +KLC
Sbjct: 101 ISWDVQTGTCYPAGFVDVMSFDKIRENFCLTCDTKGHFAVHCIIPEEAK-------YKLC 153
Query: 132 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 191
KVR + G KGI + T+D TI YP LIK TI DLE K+T+ D ++ MV
Sbjct: 154 KVRKILVGTKGILHCVTHDAPTIGYPHTLIKVKGTIPTDLEAGKVTDITTSDTNSLCMVP 213
Query: 192 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGI 251
G GR G++ NRE+H GSF+ + I DA G FAT+L N+FT GKG KPW SL +G+GI
Sbjct: 214 GDATLGRTGVVTNRERHPGSFDVVDINDANGSSFATQLANIFT-GKGNKPWTSLHQGRGI 272
Query: 252 KLSIIEEARKRQALATSAA 270
L+ EE R+A S+
Sbjct: 273 CLTFAEERDGRRAARQSSG 291
>gi|195552762|ref|XP_002076537.1| GD17639 [Drosophila simulans]
gi|194202148|gb|EDX15724.1| GD17639 [Drosophila simulans]
Length = 145
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 6/144 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL APK WMLDKLGG FAP+PS+GPHK RE LPL++ LRNRLKYAL E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I+MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 121 AL------ILLFQFKLCKVRSVQF 138
+LL LCK+ +F
Sbjct: 121 VSYLVCLGMLLHAAALCKITWFRF 144
>gi|402582302|gb|EJW76248.1| 40S ribosomal protein S4, partial [Wuchereria bancrofti]
Length = 135
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 99/142 (69%), Gaps = 7/142 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG K+HLKRL APKHWMLDKLGG FAP+P GPHK RE LPLIL LRNRLKYALTY E
Sbjct: 1 MARGPKRHLKRLAAPKHWMLDKLGGVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
I QR + VD KVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H I ++E
Sbjct: 61 ARMICKQRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEG- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKG 142
KLCK+ G KG
Sbjct: 120 ------NIKLCKIVRKCVGPKG 135
>gi|413948199|gb|AFW80848.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 225
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/102 (84%), Positives = 92/102 (90%), Gaps = 5/102 (4%)
Query: 114 IRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLET 173
I DE+ KA FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLET
Sbjct: 114 IADEDHKA-----HFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLET 168
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 215
NKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETI
Sbjct: 169 NKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETI 210
>gi|414589886|tpg|DAA40457.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 190
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/103 (83%), Positives = 92/103 (89%), Gaps = 5/103 (4%)
Query: 113 SIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE 172
+I DE+ KA FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE
Sbjct: 78 TIADEDHKA-----HFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLE 132
Query: 173 TNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 215
TNKI +FIKFDVGNVVMVTGGRN RVG+IKNREKHKGSFETI
Sbjct: 133 TNKIMDFIKFDVGNVVMVTGGRNTRRVGVIKNREKHKGSFETI 175
>gi|355428416|gb|AER92524.1| hypothetical protein, partial [Triatoma rubida]
Length = 133
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 105/133 (78%), Gaps = 2/133 (1%)
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G + IP++ T+DGRTIRYPDPL K NDTI+LD+ T+KI + I+ D GN+ M+TGGRN GR
Sbjct: 2 GAERIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMITGGRNLGR 61
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 258
VG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG+K +VSLPKGKG+KLSI EE
Sbjct: 62 VGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGVKLSIAEE 121
Query: 259 ARKRQALATSAAA 271
KR LA AA+
Sbjct: 122 RDKR--LAAKAAS 132
>gi|242052939|ref|XP_002455615.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
gi|241927590|gb|EES00735.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
Length = 129
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/122 (72%), Positives = 97/122 (79%), Gaps = 19/122 (15%)
Query: 69 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQF 128
HVLVD K RTDKTY GFMDV+SIPKT EN+R+LYDTKGRFRLHS+RDE+AK
Sbjct: 26 HVLVDGKFRTDKTY--GFMDVISIPKTGENYRILYDTKGRFRLHSVRDEDAK-------- 75
Query: 129 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 188
FGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+ L TNKI +FIKFDVGNVV
Sbjct: 76 ---------FGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIYLVTNKIVDFIKFDVGNVV 126
Query: 189 MV 190
MV
Sbjct: 127 MV 128
>gi|444724744|gb|ELW65342.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 145
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 103/151 (68%), Gaps = 7/151 (4%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
MLDKL FAP PS+GPHK + CLPLI+ LRNRLKYAL EV + QR + V KVRT
Sbjct: 1 MLDKLTSVFAPGPSAGPHKLKGCLPLIIFLRNRLKYALAGDEVKKVCTQRFIKVAGKVRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQF 138
D TYP GFM V SI KT ENFRL+YDTKG F +H + EEAK +KLCKVR +
Sbjct: 61 DITYPVGFMGVTSIDKTRENFRLIYDTKGHFTVHRVTPEEAK-------YKLCKVRKIFE 113
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKL 169
G KG P++ T+ T RYPDPLIK NDT +L
Sbjct: 114 GTKGTPHLVTHVAHTTRYPDPLIKVNDTFRL 144
>gi|343473039|emb|CCD14964.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
IL Q V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA
Sbjct: 2 ILRQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEA---- 57
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 183
K+ KV +V G IP T+DG IRYPDP DT+ D++ K+T+ IK
Sbjct: 58 ---GMKMMKVVNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIG 114
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW- 242
G VVMVTGG NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK
Sbjct: 115 SGKVVMVTGGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVP 174
Query: 243 VSLPKGKGIKLSIIEE 258
V+LPK G++ ++I E
Sbjct: 175 VTLPKQLGLRKNVIVE 190
>gi|413933474|gb|AFW68025.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 387
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/90 (88%), Positives = 87/90 (96%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVRSVQFGQKGIPY+NTYDGRTIRY DPLIKANDTIK++LETNKI +FIKFDVGN+
Sbjct: 290 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYHDPLIKANDTIKINLETNKIMDFIKFDVGNM 349
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 350 VMVTGGRNTGRVGVIKNREKHKGSFETIHV 379
>gi|432102968|gb|ELK30365.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 301
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 112/175 (64%), Gaps = 30/175 (17%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK + APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LR RLKYALT E
Sbjct: 1 MARGPKKHLKHVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRIRLKYALTGDE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR F+D KT ENFRL+YDTKG F +H R EEAK
Sbjct: 61 VKKICMQR-----------------FID-----KTGENFRLVYDTKGCFAVHR-RPEEAK 97
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK 175
+KLCKVR + G KGIP++ T+D RTI YPDPLIK + + E+ K
Sbjct: 98 -------YKLCKVRKIFVGTKGIPHLVTHDARTICYPDPLIKLSQKLPEKWESVK 145
>gi|293336106|ref|NP_001169793.1| uncharacterized protein LOC100383683 [Zea mays]
gi|223949565|gb|ACN28866.1| unknown [Zea mays]
gi|224031705|gb|ACN34928.1| unknown [Zea mays]
Length = 107
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 86/90 (95%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
F LCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNV
Sbjct: 10 FMLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNV 69
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 70 VMVTGGRNTGRVGVIKNREKHKGSFETIHV 99
>gi|413925805|gb|AFW65737.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 167
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 85/90 (94%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI FDVGNV
Sbjct: 70 FKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVGNV 129
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 130 VMVTGGRNTGRVGAIKNREKHKGSFETIHV 159
>gi|413925806|gb|AFW65738.1| putative ribosomal protein S4 (RPS4A) family protein isoform 1 [Zea
mays]
gi|413925807|gb|AFW65739.1| putative ribosomal protein S4 (RPS4A) family protein isoform 2 [Zea
mays]
gi|413925808|gb|AFW65740.1| putative ribosomal protein S4 (RPS4A) family protein isoform 3 [Zea
mays]
Length = 99
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/91 (89%), Positives = 85/91 (93%)
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 186
FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI FDVGN
Sbjct: 1 MFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVGN 60
Query: 187 VVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VVMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 61 VVMVTGGRNTGRVGAIKNREKHKGSFETIHV 91
>gi|119595939|gb|EAW75533.1| hCG2043550 [Homo sapiens]
Length = 157
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 104/146 (71%), Gaps = 2/146 (1%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK++ APKHWML+KL G FAP PS+ PH RECLPLI+ LRNRLKY LT E
Sbjct: 1 MARGPKKHLKQVAAPKHWMLNKLTGVFAPHPSTSPHNLRECLPLIIFLRNRLKYVLTGNE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I MQR + ++ KVRTD TY AGFMDV SI K+ ENFRL+YDTKGRF +H I EEAK
Sbjct: 61 VKKICMQRFIKINGKVRTDITYSAGFMDVNSIDKSGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQ--FGQKGIP 144
A L+ + ++ + FGQ P
Sbjct: 121 AGSLVLPHPCPEQKNPEEAFGQSRSP 146
>gi|414588932|tpg|DAA39503.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 143
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 91/113 (80%), Gaps = 7/113 (6%)
Query: 105 TKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 164
T G FRLH IRDE+ K FKLCKVRSVQFGQ GIPY+NTYDG TIRYPDPLIKAN
Sbjct: 30 TTGCFRLHPIRDEDIK-------FKLCKVRSVQFGQTGIPYLNTYDGHTIRYPDPLIKAN 82
Query: 165 DTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
D IK+DLETNKI +F KFDVGNVVMVT GRN RVG+IKN EKHKGSFE I +
Sbjct: 83 DNIKIDLETNKIMDFFKFDVGNVVMVTDGRNTERVGVIKNWEKHKGSFEVIDV 135
>gi|222064029|emb|CAQ86677.1| putative ribosomal protein L18 [Histomonas meleagridis]
Length = 172
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 117/171 (68%), Gaps = 7/171 (4%)
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
MDV+ + K+NE FRLLYD KGRF H I +EA +FKL ++ G++G+P++
Sbjct: 1 MDVIELGKSNEQFRLLYDAKGRFVAHKIEPKEA-------EFKLLRINKYFIGERGVPHL 53
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
+DG T+RY DP I+ NDT+K +L+T+++ FIKF+ GNV MVT G N GRVG+I++ E
Sbjct: 54 VAHDGHTLRYVDPSIRMNDTVKYNLKTHEVDNFIKFEKGNVAMVTSGGNVGRVGVIQSIE 113
Query: 207 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIE 257
F +HI+DA G EFATR+ NVF IG+G P +SLP+ G++ SI+E
Sbjct: 114 PQMVGFSIVHIKDASGAEFATRIPNVFVIGQGENPLISLPRRAGVRPSILE 164
>gi|350594665|ref|XP_003483943.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Sus scrofa]
Length = 221
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 107/151 (70%), Gaps = 7/151 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G +K+LK + APKHWMLDKL G FAP PS+ P+K RECLPLI+ LR+RLK A+ E
Sbjct: 1 MAHGPQKYLKHVAAPKHWMLDKLTGIFAPCPSTRPYKLRECLPLIIFLRHRLKGAIIGEE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I M R + +D KV TD TYPAGFMDVVSI KT E+F L+YDTKG F +H I EEAK
Sbjct: 61 VKEICMPRFIKIDGKVCTDITYPAGFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDG 151
+KLCKV + G +GIP++ T+DG
Sbjct: 121 -------YKLCKVGKIFMGIQGIPHLVTHDG 144
>gi|350594667|ref|XP_003483944.1| PREDICTED: hypothetical protein LOC100738356 [Sus scrofa]
Length = 365
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 107/151 (70%), Gaps = 7/151 (4%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA G +K+LK + APKHWMLDKL G FAP PS+ P+K RECLPLI+ LR+RLK A+ E
Sbjct: 1 MAHGPQKYLKHVAAPKHWMLDKLTGIFAPCPSTRPYKLRECLPLIIFLRHRLKGAIIGEE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V I M R + +D KV TD TYPAGFMDVVSI KT E+F L+YDTKG F +H I EEAK
Sbjct: 61 VKEICMPRFIKIDGKVCTDITYPAGFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDG 151
+KLCKV + G +GIP++ T+DG
Sbjct: 121 -------YKLCKVGKIFMGIQGIPHLVTHDG 144
>gi|347524208|ref|YP_004781778.1| 30S ribosomal protein S4E, central domain containing protein
[Pyrolobus fumarii 1A]
gi|343461090|gb|AEM39526.1| Ribosomal protein S4E, central domain protein [Pyrolobus fumarii
1A]
Length = 255
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 148/260 (56%), Gaps = 20/260 (7%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G ++HLK L APK W + + G F KP GPH C+PL++++R+ L YA T R
Sbjct: 1 MARMGGRRHLKTLAAPKFWPVRERAGVFTVKPRPGPHPLHRCIPLLVLVRDVLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E I+ + H VD +VR D +P GFMDVV + T E +R+L F LH I DEEA
Sbjct: 61 EARKIIAEGHFKVDGRVRRDYKFPVGFMDVVEVVDTGEKYRILPYPTRFFILHPISDEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKAND--------TIKL 169
K KLC++ + G ++ +DGR IR DP +A++ T+K+
Sbjct: 121 KV-------KLCRIEDKSTVKGGHVQLHCHDGRNVLIRVSDP-TRADEAKPYRTLGTLKI 172
Query: 170 DLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATR 228
+ +I +++ +VGN+ +V GGRN GRVG I ++ G +I ++DA G +F T
Sbjct: 173 TIPGQEILDYVPLEVGNLAIVFGGRNVGRVGKIVEIQRGMGRKRSIVTLEDARGEKFQTS 232
Query: 229 LGNVFTIGKGTKPWVSLPKG 248
L VF IGKG +P +SLP+G
Sbjct: 233 LDYVFVIGKGDEPLISLPEG 252
>gi|414884816|tpg|DAA60830.1| TPA: hypothetical protein ZEAMMB73_165124 [Zea mays]
Length = 877
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/90 (87%), Positives = 84/90 (93%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLET KI FIKFDVGN+
Sbjct: 780 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETYKIKNFIKFDVGNM 839
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVT RN GRVG+IKNREKHKGSFETIH+
Sbjct: 840 VMVTSRRNTGRVGVIKNREKHKGSFETIHV 869
>gi|413923240|gb|AFW63172.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 442
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/90 (86%), Positives = 85/90 (94%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE NKI +FIKFDV NV
Sbjct: 345 FKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEINKIMDFIKFDVDNV 404
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 405 VMVTGGRNTGRVGVIKNREKHKGNFETIHV 434
>gi|413923241|gb|AFW63173.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 457
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/90 (86%), Positives = 85/90 (94%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE NKI +FIKFDV NV
Sbjct: 360 FKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEINKIMDFIKFDVDNV 419
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 420 VMVTGGRNTGRVGVIKNREKHKGNFETIHV 449
>gi|413936191|gb|AFW70742.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 210
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 82/90 (91%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP IKANDTIK+DLETNKI +F KFDV NV
Sbjct: 83 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPFIKANDTIKIDLETNKIMDFFKFDVSNV 142
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVTGGRN GRVG+IKN EKHKGSFE I +
Sbjct: 143 VMVTGGRNTGRVGVIKNWEKHKGSFEVIDV 172
>gi|413935851|gb|AFW70402.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 166
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/90 (86%), Positives = 83/90 (92%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
F LCKVRSVQFGQKGIP +NTYD RTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNV
Sbjct: 69 FMLCKVRSVQFGQKGIPCLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNV 128
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMV GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 129 VMVISGRNTGRVGVIKNREKHKGSFETIHV 158
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAF 27
MARGLKKHLKRLNAPKHWMLDKLGGAF
Sbjct: 42 MARGLKKHLKRLNAPKHWMLDKLGGAF 68
>gi|300174358|gb|ADJ68147.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174362|gb|ADJ68149.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174366|gb|ADJ68151.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174374|gb|ADJ68155.1| putative RpS4 protein [Caenacis lauta]
Length = 122
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 97/129 (75%), Gaps = 7/129 (5%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTY 82
LGG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD KVRTD Y
Sbjct: 1 LGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNY 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKG 142
PAGFMDV++I KTNE FRL+YD KGRF +H I EAK +KLCKVR VQ G KG
Sbjct: 61 PAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAK-------YKLCKVRRVQTGPKG 113
Query: 143 IPYINTYDG 151
IP++ T+DG
Sbjct: 114 IPFLVTHDG 122
>gi|402697608|gb|AFQ90989.1| X-linked ribosomal protein S4, partial [Draco sumatranus]
Length = 193
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 108/200 (54%), Gaps = 7/200 (3%)
Query: 16 KHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAK 75
KHWMLDKL G FAP+PS+GPHK RECLPLI+ LR RJKY LT EV I MQR + +D K
Sbjct: 1 KHWMLDKLTGVFAPRPSTGPHKXRECLPLIIFLRXRJKYXLTGDEVKKICMQRFIKIDGK 60
Query: 76 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRS 135
VRTD TYP GFMDV+S K EB RL+ DTKGRF +H I EEAK +KLCKVR
Sbjct: 61 VRTDITYPXGFMDVISXEKXGEBXRLVXDTKGRFAVHRIXPEEAK-------YKLCKVRK 113
Query: 136 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 195
+ G KGIP++
Sbjct: 114 IFVGTKGIPHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 173
Query: 196 RGRVGIIKNREKHKGSFETI 215
R+G+I N E+H GSF+ +
Sbjct: 174 XXRIGVITNXERHPGSFDVV 193
>gi|414867192|tpg|DAA45749.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 528
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/96 (80%), Positives = 83/96 (86%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCK+RSVQFGQKGIPY+NTYDG TI YPDPLIKANDTIK+DLETNKI +F KFDV NV
Sbjct: 209 FKLCKMRSVQFGQKGIPYLNTYDGCTILYPDPLIKANDTIKIDLETNKIMDFFKFDVSNV 268
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGH 223
VMVTGGRN GRVG+IKN EKHKGSFE + DA H
Sbjct: 269 VMVTGGRNTGRVGVIKNWEKHKGSFEQLAGPDAAQH 304
>gi|344246835|gb|EGW02939.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 130
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 97/128 (75%), Gaps = 7/128 (5%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR + +D KVRTD TYPAGFM+V+SI KT ENF L+YDTKGRF +H I EEAK
Sbjct: 1 MQRFIKIDGKVRTDITYPAGFMNVISIDKTGENFGLIYDTKGRFAVHRITPEEAK----- 55
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+KLCKVR + G KGI ++ T+D RTI+YPDPLIK NDTI++DLET KI +FIKFD
Sbjct: 56 --YKLCKVRKIFVGTKGILHLMTHDARTIQYPDPLIKVNDTIQIDLETGKIIDFIKFDAA 113
Query: 186 NVVMVTGG 193
N+ MVTGG
Sbjct: 114 NLCMVTGG 121
>gi|300174364|gb|ADJ68150.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174370|gb|ADJ68153.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174372|gb|ADJ68154.1| putative RpS4 protein [Cecidostiba fungosa]
gi|401878838|gb|AFQ30711.1| putative RpS4, partial [Cecidostiba semifascia]
gi|401878840|gb|AFQ30712.1| putative RpS4, partial [Cecidostiba semifascia]
gi|401878842|gb|AFQ30713.1| putative RpS4, partial [Cecidostiba semifascia]
Length = 121
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD KVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 84 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGI 143
AGFMDV++I KTNE FRL+YD KGRF +H I EAK +KLCKVR VQ G KGI
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAK-------YKLCKVRRVQTGPKGI 113
Query: 144 PYINTYDG 151
P++ T+DG
Sbjct: 114 PFLVTHDG 121
>gi|300174368|gb|ADJ68152.1| putative RpS4 protein [Cecidostiba fungosa]
Length = 122
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 96/129 (74%), Gaps = 7/129 (5%)
Query: 23 LGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTY 82
L G +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD KVRTD Y
Sbjct: 1 LVGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNY 60
Query: 83 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKG 142
PAGFMDV++I KTNE FRL+YD KGRF +H I EAK +KLCKVR VQ G KG
Sbjct: 61 PAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAK-------YKLCKVRRVQTGPKG 113
Query: 143 IPYINTYDG 151
IP++ T+DG
Sbjct: 114 IPFLVTHDG 122
>gi|414878754|tpg|DAA55885.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 325
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 83/90 (92%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DL+TNKI +FIKFDV N+
Sbjct: 228 FKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLQTNKIMDFIKFDVDNM 287
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVTGGRN RVG+IKNREKHKGSFETIH+
Sbjct: 288 VMVTGGRNTRRVGVIKNREKHKGSFETIHV 317
>gi|219881153|gb|ACL51779.1| putative ribosomal protein S4 [Pinus lambertiana]
gi|219881159|gb|ACL51782.1| putative ribosomal protein S4 [Pinus strobiformis]
Length = 86
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/86 (87%), Positives = 80/86 (93%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV
Sbjct: 1 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLLRNRLKYALTYREV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFM 87
IAI+MQR + VD KVRTDK YPAGFM
Sbjct: 61 IAIVMQRLISVDGKVRTDKCYPAGFM 86
>gi|413921922|gb|AFW61854.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 184
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 81/91 (89%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
KLCKVRSVQFGQKGIPY+NTY+GRTIRYPDPLIKANDTIK+DLE NKI +F KFD+GNV
Sbjct: 87 LKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDPLIKANDTIKIDLENNKIMDFFKFDIGNV 146
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 218
VMVTGGRN VG+IKN EKHKGSFE I +Q
Sbjct: 147 VMVTGGRNTRCVGVIKNWEKHKGSFEVIDVQ 177
>gi|300707086|ref|XP_002995766.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
gi|239604977|gb|EEQ82095.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
Length = 263
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 146/260 (56%), Gaps = 13/260 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G +KHL R A W +DK G +A + SGPHK C+PL +L+ L+YA +E
Sbjct: 1 MTGGPRKHLNRQVALDSWKIDKSIGTYAIRTHSGPHKKDLCIPLAYVLQYFLEYAHNRKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ IL ++++++ KV + +P G DV+S+ KTN ++R+L+ F LH I +EE+K
Sbjct: 61 IQIILKSKNIMINGKVIEKRKFPVGVGDVISVVKTNLHYRVLFGVDKSFILHQIDEEESK 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+KL KV + + +PYI T DG +Y +P I N+T+K+ L+T + +++
Sbjct: 121 -------YKLAKVLNKKTMYNNVPYIFTNDGACFKYCNPAIDINNTVKICLKTRTVVDYV 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
F G +V V G N GR+GIIK + +++ +D +F + ++ IG
Sbjct: 174 SFREGGIVYVYTGENTGRIGIIKTIKD-----KSLICEDFGSKQFEASISSLIAIGDSED 228
Query: 241 P-WVSLPKGKGIKLSIIEEA 259
+SLP+ KG++L+ +EE+
Sbjct: 229 SLLISLPEEKGVRLTALEES 248
>gi|457682|dbj|BAA04961.1| SS620 [Oryza sativa]
Length = 90
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 84/95 (88%), Gaps = 7/95 (7%)
Query: 53 KYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLH 112
KYALTYREVI+ILMQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL
Sbjct: 1 KYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQ 60
Query: 113 SIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYIN 147
S++DE+AK FKLCKVRSVQFGQKGI Y+N
Sbjct: 61 SVKDEDAK-------FKLCKVRSVQFGQKGIRYLN 88
>gi|215809414|gb|ACJ70414.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809416|gb|ACJ70415.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809418|gb|ACJ70416.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809420|gb|ACJ70417.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809422|gb|ACJ70418.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809424|gb|ACJ70419.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809426|gb|ACJ70420.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809428|gb|ACJ70421.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809430|gb|ACJ70422.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809432|gb|ACJ70423.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809434|gb|ACJ70424.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809436|gb|ACJ70425.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809438|gb|ACJ70426.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809440|gb|ACJ70427.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809442|gb|ACJ70428.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809445|gb|ACJ70429.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809447|gb|ACJ70430.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809451|gb|ACJ70432.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809453|gb|ACJ70433.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809455|gb|ACJ70434.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809457|gb|ACJ70435.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809459|gb|ACJ70436.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809461|gb|ACJ70437.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809463|gb|ACJ70438.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809465|gb|ACJ70439.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809467|gb|ACJ70440.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809469|gb|ACJ70441.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809471|gb|ACJ70442.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809473|gb|ACJ70443.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809475|gb|ACJ70444.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809477|gb|ACJ70445.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|219881155|gb|ACL51780.1| putative ribosomal protein S4 [Pinus nigra]
gi|219881157|gb|ACL51781.1| putative ribosomal protein S4 [Pinus pinaster]
gi|219881161|gb|ACL51783.1| putative ribosomal protein S4 [Pinus resinosa]
Length = 86
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/86 (86%), Positives = 80/86 (93%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL+++LRNRLKYALTYREV
Sbjct: 1 ARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLLRNRLKYALTYREV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFM 87
IAI+MQR + VD KVRTDK YPAGFM
Sbjct: 61 IAIVMQRLISVDGKVRTDKCYPAGFM 86
>gi|300174360|gb|ADJ68148.1| putative RpS4 protein [Cecidostiba fungosa]
Length = 119
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 94/126 (74%), Gaps = 7/126 (5%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD KVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 84 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGI 143
AGFMDV++I KTNE FRL+YD KGRF +H I EAK +KLCKVR VQ G KGI
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAK-------YKLCKVRRVQTGPKGI 113
Query: 144 PYINTY 149
P++ T+
Sbjct: 114 PFLVTH 119
>gi|215809449|gb|ACJ70431.1| putative ribosomal protein S4 [Pinus sylvestris]
Length = 86
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 80/86 (93%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLPL++++RNRLKYALTYREV
Sbjct: 1 ARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYREV 60
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFM 87
IAI+MQR + VD KVRTDK YPAGFM
Sbjct: 61 IAIVMQRLISVDGKVRTDKCYPAGFM 86
>gi|414886273|tpg|DAA62287.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 287
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/85 (85%), Positives = 78/85 (91%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DLETNKI +FIKFDV N+
Sbjct: 182 FKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLETNKIMDFIKFDVDNM 241
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSF 212
VMVTGGRN RVG+IKNREKHKGSF
Sbjct: 242 VMVTGGRNTERVGVIKNREKHKGSF 266
>gi|194691268|gb|ACF79718.1| unknown [Zea mays]
Length = 102
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/83 (89%), Positives = 80/83 (96%)
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
IKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG
Sbjct: 10 IKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGN 69
Query: 240 KPWVSLPKGKGIKLSIIEEARKR 262
KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 70 KPWVSLPKGKGIKLSIIEEQRKR 92
>gi|414886272|tpg|DAA62286.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 183
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/90 (81%), Positives = 80/90 (88%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DLETNKI +FIKFDV N+
Sbjct: 78 FKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLETNKIMDFIKFDVDNM 137
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
VMVTGGRN RVG+IKNREKHKGSF + +
Sbjct: 138 VMVTGGRNTERVGVIKNREKHKGSFCCLEL 167
>gi|413943350|gb|AFW75999.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 336
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/90 (81%), Positives = 78/90 (86%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVRSVQFGQKGI Y+NTYDGRTIRYPD LIKANDTIK+DLETNKI +F KFDV NV
Sbjct: 227 FKLCKVRSVQFGQKGISYLNTYDGRTIRYPDLLIKANDTIKIDLETNKIMDFFKFDVSNV 286
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
MVTGGRN RVG+IKN EKHK SFE I +
Sbjct: 287 FMVTGGRNTRRVGVIKNWEKHKASFEVIDV 316
>gi|401878898|gb|AFQ30741.1| putative RpS4, partial [Hobbya stenonota]
gi|401878900|gb|AFQ30742.1| putative RpS4, partial [Hobbya stenonota]
gi|401878902|gb|AFQ30743.1| putative RpS4, partial [Hobbya stenonota]
Length = 114
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 90/121 (74%), Gaps = 7/121 (5%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD KVRTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 60
Query: 84 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGI 143
AGFMDV++I KTNE FRL+YD KGRF +H I EAK +KLCKVR VQ G KGI
Sbjct: 61 AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAK-------YKLCKVRRVQTGPKGI 113
Query: 144 P 144
P
Sbjct: 114 P 114
>gi|269861121|ref|XP_002650275.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
gi|220066289|gb|EED43777.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
Length = 270
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 138/266 (51%), Gaps = 14/266 (5%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M G +HLK+L AP+ W L+K G +A +P GP+ +P+ IL N L A T +E
Sbjct: 1 MPSGGHRHLKKLAAPRKWGLNKSNGKYAVRPLPGPYNKELSIPIHYILSNFLNVAHTAKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
+ I+ VLV+ + + G DV+SI KTNE++RL+ +F+L I +EA+
Sbjct: 61 IHYIIKNEMVLVNNRKLLNHKSVVGLFDVISIKKTNEHYRLILGINRKFKLQKISSDEAR 120
Query: 121 ALILLFQFKLCKVRS-------VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLET 173
F+L KV S + + +P T G RY +P I+ NDT+K+D+
Sbjct: 121 -------FRLTKVTSKSTDKLIIDGVETNVPMTRTLCGYNFRYANPEIEVNDTVKIDIVE 173
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
NKI E KF+ G +V + G N GRVG IK+ E I + D + F T L +
Sbjct: 174 NKILEHYKFETGAIVFIYSGSNIGRVGTIKSIESQTNKKILIELVDGNMNHFTTLLSSAM 233
Query: 234 TIGKGTKPWVSLPKGKGIKLSIIEEA 259
IGK ++L + KGIKL+ E++
Sbjct: 234 VIGKDDSTLITLDESKGIKLTEYEKS 259
>gi|310771952|emb|CBH28913.1| 40S RIBOSOMAL PROTEIN S4 [Anncaliia algerae]
Length = 171
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 114/176 (64%), Gaps = 7/176 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M++G++KHLKRL+APK W LDK GG +AP P+ G H RE +PL ++LR LK A + +E
Sbjct: 1 MSKGIRKHLKRLHAPKSWRLDKTGGKYAPMPTVGSHPRRESIPLSILLRRYLKVAPSMKE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
++ +L ++ +LV+ VRTD TYP G MDV++I TNE++R++YD +F LH I EE+
Sbjct: 61 LVYVLGKKIILVNGVVRTDTTYPLGIMDVLTIQSTNEHYRVMYDVFKKFVLHKIDAEESN 120
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKI 176
+ K ++V PYI T DG + RY DP IK ND++ +D++ K+
Sbjct: 121 IKVCKVIKKKICKKNV-------PYIYTADGYSFRYCDPKIKTNDSLIVDIKEMKV 169
>gi|315229869|ref|YP_004070305.1| 30S ribosomal protein S4e [Thermococcus barophilus MP]
gi|315182897|gb|ADT83082.1| SSU ribosomal protein S4e [Thermococcus barophilus MP]
Length = 248
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 138/250 (55%), Gaps = 6/250 (2%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTQWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + +LVD K R D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EARKILNEGKILVDGKARKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFK-LCKVRSVQFG-QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 177
K L K + K ++Q G G Y+ T D K + T+ + + +IT
Sbjct: 121 KIKPLRITRKVMVKGGNLQIGFHDGTNYLVKLSSLTDEVKD-RFKTSYTVFMKMPEREIT 179
Query: 178 EFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 236
E + F++G V VT G+N R+G I++ R G + + I+D G F T F IG
Sbjct: 180 EILPFEIGAYVFVTQGKNVARIGKIVEVRHFPAGWPDVVTIEDQEGELFDTLKEYAFVIG 239
Query: 237 KGTKPWVSLP 246
K KP +SLP
Sbjct: 240 K-DKPGISLP 248
>gi|390986591|gb|AFM35815.1| hypothetical protein, partial [Oryza eichingeri]
Length = 77
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/77 (92%), Positives = 74/77 (96%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
APKPSSGPHK+RECLPLILILRNRLKYALTYRE I+ILMQRHV+VD KVRTDKTYPAGFM
Sbjct: 1 APKPSSGPHKARECLPLILILRNRLKYALTYREGISILMQRHVMVDGKVRTDKTYPAGFM 60
Query: 88 DVVSIPKTNENFRLLYD 104
DVVSIPKT ENFRLLYD
Sbjct: 61 DVVSIPKTGENFRLLYD 77
>gi|414869427|tpg|DAA47984.1| TPA: hypothetical protein ZEAMMB73_281063 [Zea mays]
Length = 282
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 78/85 (91%)
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
N+ IKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++D++GH+FAT +GNVF
Sbjct: 198 NQNHGLIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSMGHQFATCMGNVF 257
Query: 234 TIGKGTKPWVSLPKGKGIKLSIIEE 258
TIGKG KPWVSLPKG+GIKLSIIEE
Sbjct: 258 TIGKGNKPWVSLPKGRGIKLSIIEE 282
>gi|27363136|gb|AAO11521.1| 40S ribosomal protein S4 [Azumapecten farreri]
Length = 105
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 85/112 (75%), Gaps = 7/112 (6%)
Query: 72 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLC 131
VD KVRT K YPAGFMDV++I KTNENFRLLYD KGRF +H I+ EEAK +KLC
Sbjct: 1 VDGKVRTAKDYPAGFMDVIAIEKTNENFRLLYDVKGRFTVHRIKPEEAK-------YKLC 53
Query: 132 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 183
+V+SV G KG+P + T+D RTIRYPDPL K NDT+ +D+ T K+ EFIKFD
Sbjct: 54 RVKSVTVGAKGVPMLTTHDARTIRYPDPLAKVNDTVMVDIATGKMKEFIKFD 105
>gi|124028167|ref|YP_001013487.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
gi|189045349|sp|A2BMD1.1|RS4E_HYPBU RecName: Full=30S ribosomal protein S4e
gi|123978861|gb|ABM81142.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
Length = 255
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 138/259 (53%), Gaps = 18/259 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G ++HLK L APK W + + G F KPS GPH +PL++++R+ L YA T R
Sbjct: 1 MARMGGRRHLKTLAAPKFWPVRQRAGIFTVKPSPGPHPIERSIPLLILVRDVLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E ++ + H +D +VR + YP GFMDV+ I T E +R+L F LH I EEA
Sbjct: 61 EARKLIAEGHFKIDGRVRRNYKYPVGFMDVIEIVDTGEFYRVLPYPTRFFTLHPISKEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPL-------IKANDTIKLD 170
QFKL ++ + G ++ +DGR IR DP K T+K+
Sbjct: 121 -------QFKLGRIEDKSTVKGGHIQLHLHDGRNVLIRVSDPTNPVEAKPYKTLGTVKIS 173
Query: 171 LETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLG 230
+ ++ + +VG++V++ GGRN GRVG I + + + I+DA G + T L
Sbjct: 174 IPEQQLLGYAPLEVGSLVIIFGGRNVGRVGRIVSIQPGMRRRGIVTIEDARGEKIQTSLE 233
Query: 231 NVFTIG-KGTKPWVSLPKG 248
VF I +PW+SLP+G
Sbjct: 234 YVFVIAPPNEEPWISLPEG 252
>gi|304314266|ref|YP_003849413.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
Marburg]
gi|302587725|gb|ADL58100.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
Marburg]
Length = 242
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 131/245 (53%), Gaps = 10/245 (4%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
+KHLKR +P HW + + KPS GPH LPL++I+R+ L A RE I+
Sbjct: 7 RKHLKRFRSPSHWPIHPKEYKWTVKPSPGPHAIEASLPLMIIVRDILGVADNAREARKII 66
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
VLVD + R + +P GFMDVVSIP+T E +R+L D +GR LH I +E A
Sbjct: 67 NSGEVLVDGRPRKNYKFPVGFMDVVSIPRTGEVYRVLPDERGRLVLHPIGEENA------ 120
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
FKLCK+ + + G +N +DGR D + D +KL + +I E I F+ G
Sbjct: 121 -GFKLCKIVNKTTIRGGKTQLNLHDGRNYLSEDEF-RVGDVVKLAVPEQEILERIPFEKG 178
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 244
++ +VTGGR+ G +G IK + S T I+ G F T VF IGK + +S
Sbjct: 179 SLGLVTGGRHTGEIGRIKKINITRSSMPNTAVIETEAGKTFLTLKDYVFVIGK-DESVIS 237
Query: 245 LPKGK 249
LP GK
Sbjct: 238 LPGGK 242
>gi|312137088|ref|YP_004004425.1| 30S ribosomal protein S4e [Methanothermus fervidus DSM 2088]
gi|311224807|gb|ADP77663.1| SSU ribosomal protein S4E [Methanothermus fervidus DSM 2088]
Length = 240
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 141/250 (56%), Gaps = 12/250 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G ++HLKRL +P+HW + + + KPS GPH + E LPL++I+R+ L A T R
Sbjct: 1 MARMGSRRHLKRLKSPRHWPIPRKEKKWTVKPSPGPHSADESLPLLIIIRDVLGLADTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E I+ +LVD + R D +P GFMD++ IPK ++++R+L D KGR LH ++EE
Sbjct: 61 EAKRIIHHGEILVDGRPRKDHKFPVGFMDLLEIPKIDKSYRVLIDKKGRLYLHETKEEE- 119
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
++KLCK+ + + G +N +DGR D K D IKL + +I +
Sbjct: 120 -------RYKLCKILNKTTVKGGKIQLNLHDGRN-HLVDNDFKTGDVIKLRIPDQEILDK 171
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKG-SFETIHIQDALGHEFATRLGNVFTIGKG 238
I+F GN+ +TGG++ G + ++ K + T+ ++ G F T VF IG+
Sbjct: 172 IEFKEGNLAFITGGKHVGEIARVEKINIIKAPTPNTVILKSRDGKMFETIHEYVFMIGE- 230
Query: 239 TKPWVSLPKG 248
+P + LP+G
Sbjct: 231 KEPVIPLPEG 240
>gi|296109308|ref|YP_003616257.1| ribosomal protein S4E, central domain protein [methanocaldococcus
infernus ME]
gi|295434122|gb|ADG13293.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
infernus ME]
Length = 245
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 136/251 (54%), Gaps = 18/251 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E LPL+LI+R+ LKYA +E
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKTHKFTVRPLPGAHPMSESLPLLLIVRDVLKYADNRKEAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ +LVD +VR ++ P GFMDVVS+P+ NEN+R+L+D KGR +L+ + +
Sbjct: 64 KIIKMGKILVDGRVRKEEKLPVGFMDVVSLPEANENYRVLFDRKGRVKLYPTENPDV--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLETN 174
KLCK+++ + G +N +DGR I+ DP + K DT+ + +
Sbjct: 121 ------KLCKIKNKTVVKGGHIQLNLHDGRNIIIKVSDPTKAEEDVYKTGDTLLISIPDQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
+I + I F+VG + +TGG++ G + I + EK + ++ G +F T VF
Sbjct: 175 EIKDHIPFEVGKLAYITGGKHVGEIAKIVDIEKKPLHKTVVTLETPDGEKFKTVKDYVFV 234
Query: 235 IGKGTKPWVSL 245
IG KP + L
Sbjct: 235 IG-DEKPVIKL 244
>gi|413942294|gb|AFW74943.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 307
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 97/142 (68%), Gaps = 4/142 (2%)
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
A + ++ + A + T P+G + ++P+ + + KG RL + A
Sbjct: 170 ACISRKLIDTSAYLWTGYVVPSGTLKDTALPQESPWLNFM---KGS-RLSGPLIDALVAS 225
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+TNKI +F KF
Sbjct: 226 PASRCFKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKF 285
Query: 183 DVGNVVMVTGGRNRGRVGIIKN 204
DVGNVVMVTGGRN GRVG+IKN
Sbjct: 286 DVGNVVMVTGGRNTGRVGVIKN 307
>gi|223477731|ref|YP_002582376.1| 30S ribosomal protein S4e [Thermococcus sp. AM4]
gi|214032957|gb|EEB73785.1| SSU ribosomal protein S4e [Thermococcus sp. AM4]
Length = 243
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 141/252 (55%), Gaps = 15/252 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +PS GPH + +PL+ I+R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTSWYIHRKAYKWAVRPSPGPHNMQTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + +LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNK 175
K L F++ R V+ + +N +DG ++ D K + TI + + +
Sbjct: 121 K----LKPFRINNKRMVKGAKVQ---LNLHDGSNHLVSLAEKDSF-KTSYTIIMKVPERE 172
Query: 176 ITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I E I F+VG V VT G+N R G I++ R G + + I+D G +F T F
Sbjct: 173 IVEVIPFEVGAYVFVTQGKNVARKGRIVEVRHFPMGWPDVVTIEDESGEKFDTLKEYAFV 232
Query: 235 IGKGTKPWVSLP 246
+GK KP +SLP
Sbjct: 233 VGK-EKPEISLP 243
>gi|333987666|ref|YP_004520273.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
gi|333825810|gb|AEG18472.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
Length = 242
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 136/250 (54%), Gaps = 11/250 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MA+ G +KHLKR +P+HW + + KPS+GPH E LPL++I+R+ LK A R
Sbjct: 1 MAKMGSRKHLKRFKSPEHWPIHPKENKWTVKPSAGPHSIEESLPLLIIVRDILKVAENSR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E I+ +LVD + R D +P GFMDV+ IPK+ + +R+L + KG L+ I E A
Sbjct: 61 EAKIIIGNGDILVDGRARKDYKFPVGFMDVIEIPKSEKVYRILPNHKGNLVLYPITKENA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
+FKLC++ + G +N +DGR + K+ D + +++ +T
Sbjct: 121 -------EFKLCRIEDKTTIKGGKTQLNLHDGRNCLV-EKEYKSGDVVVVEVPEQTVTNH 172
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKG 238
IKF+ G + ++TGG++ G +G IK + S T+ I+ F T VF IGK
Sbjct: 173 IKFESGTIGLITGGKHIGELGKIKEINVTRSSKSNTVLIETDDKKTFLTLTDYVFVIGK- 231
Query: 239 TKPWVSLPKG 248
KP +SLP G
Sbjct: 232 DKPVISLPGG 241
>gi|15678046|ref|NP_275160.1| 30S ribosomal protein S4 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3914912|sp|O26123.1|RS4E_METTH RecName: Full=30S ribosomal protein S4e
gi|2621043|gb|AAB84516.1| ribosomal protein S4 [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 242
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 131/245 (53%), Gaps = 10/245 (4%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
+KHLKR +P HW + + KPS GPH LPL++I+R+ LK A RE I+
Sbjct: 7 RKHLKRFKSPVHWPIHPKEYKWTVKPSPGPHAIENSLPLMIIVRDILKVADNAREARKII 66
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
VLVD + R + +P GFMDVVSIP+T + +R+L D +GR LH I +E A
Sbjct: 67 NSGEVLVDGRPRKNYKFPVGFMDVVSIPRTGDVYRVLPDERGRLVLHPIDEENA------ 120
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
FKLCK+ + + G +N +DGR D + D +KL + +I E I F+
Sbjct: 121 -GFKLCKIVNKTTIKGGRTQLNLHDGRNYLSDDEF-RVGDVVKLSIPEQEILERIPFEKD 178
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 244
++ +VTGGR+ G +G IK + S T I+ G F T VF IGK + +S
Sbjct: 179 SLGLVTGGRHTGEIGKIKKINITRSSMPNTAVIETGAGKTFLTLKDYVFVIGK-DESVIS 237
Query: 245 LPKGK 249
LP GK
Sbjct: 238 LPGGK 242
>gi|242398292|ref|YP_002993716.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
gi|242264685|gb|ACS89367.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
Length = 248
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 138/254 (54%), Gaps = 14/254 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +PS GPH R +PLI I+R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTQWYIERKVFKWAVRPSPGPHDMRTSIPLIYIIRDYLGYAKTGR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
EV +L + VLVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EVRKVLNEEKVLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPITEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFG------QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLET 173
K L ++ R V+ G G ++ T D + DT+ + +
Sbjct: 121 K----LKPLRISNKRMVKGGNLQLNFHDGTNHLVKLSSLTDETKDSF-RTADTVLVKVPE 175
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNV 232
+I E + F+VG V V G+N RVG I++ R G + + I+D G F T
Sbjct: 176 REIVEVVPFEVGAFVFVVQGKNVARVGKIVEVRHFPGGWPDVVTIEDRDGELFDTLKDYA 235
Query: 233 FTIGKGTKPWVSLP 246
F +GK +P +SLP
Sbjct: 236 FVLGK-EEPRISLP 248
>gi|118431012|ref|NP_147175.2| 30S ribosomal protein S4 [Aeropyrum pernix K1]
gi|17380578|sp|Q9YF85.2|RS4E_AERPE RecName: Full=30S ribosomal protein S4e
gi|116062338|dbj|BAA79311.2| 30S ribosomal protein S4e [Aeropyrum pernix K1]
Length = 253
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 141/258 (54%), Gaps = 18/258 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G ++ LK L AP+ W + + +A KP GPH + + LPL+LI+RN L YA T R
Sbjct: 1 MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E ++ + H VD VR D +P GFMDV+ + T E FR+L F+LH I +EE
Sbjct: 61 EARKLISEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVKFFKLHPIPEEEG 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTI--RYPDP------LIKANDTIKLDL 171
K ++ + + G +N +DGR I R DP + + DT+ + +
Sbjct: 121 -------DLKPVRIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITV 173
Query: 172 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLG 230
+I IKF G + ++ GGRN GRVG++K+ +K G T + ++DA G+ F T L
Sbjct: 174 PGQEIKGHIKFGEGAIAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLD 233
Query: 231 NVFTIGKGTKPWVSLPKG 248
VF IG +P +SLP+G
Sbjct: 234 YVFVIGL-DRPVISLPEG 250
>gi|325958544|ref|YP_004290010.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
gi|325329976|gb|ADZ09038.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
Length = 241
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 137/251 (54%), Gaps = 12/251 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MA+ G +KHLKR +P HW + + KPS+GPH E LPL++++R+ LK A R
Sbjct: 1 MAKMGSRKHLKRYKSPAHWPIHPKEDKWTVKPSAGPHAIEESLPLLIVVRDILKVADNSR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E I+ +LVD + R D YP GFMDV+ +PK+ + +R+L D KGR LH I ++
Sbjct: 61 EAKIIINNGDILVDGRARKDYKYPVGFMDVIELPKSEKVYRVLPDHKGRLILHPISEKNR 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
+FKLC+V + G +N +DGR + D + +++ K+T+
Sbjct: 121 -------EFKLCRVTDKTIIKGGKTQLNLHDGRNCIV-EKQYSTGDVVVVEIPEQKVTDH 172
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKG 238
IKF+ G V ++ GG++ G +G +K + S T+ ++ G F T VF +GK
Sbjct: 173 IKFESGTVGLIIGGKHIGELGKVKQINITQSSKPNTVEVETDEGI-FLTLADYVFVLGK- 230
Query: 239 TKPWVSLPKGK 249
+P +SLP GK
Sbjct: 231 EEPVISLPGGK 241
>gi|413942295|gb|AFW74944.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 152
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 73/77 (94%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+TNKI +F KFDVGNV
Sbjct: 76 FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 135
Query: 188 VMVTGGRNRGRVGIIKN 204
VMVTGGRN GRVG+IKN
Sbjct: 136 VMVTGGRNTGRVGVIKN 152
>gi|333910781|ref|YP_004484514.1| 30S ribosomal protein S4 [Methanotorris igneus Kol 5]
gi|333751370|gb|AEF96449.1| 30S ribosomal protein S4e [Methanotorris igneus Kol 5]
Length = 244
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 17/242 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G ++HLKRL AP +W + + F +P GPH E LPL+LI+R+ LKYA RE
Sbjct: 4 KGPRRHLKRLAAPANWQIPRKVHKFVVRPLPGPHAMNESLPLLLIVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ +LVD + R + +P G MDVVSIP TNE+FR L+D KGR L + +
Sbjct: 64 KIIKMGKILVDGRKRKEHKFPVGLMDVVSIPDTNEHFRALFDEKGRIVLRPTENPDV--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLETN 174
KLC++R+ + G +N +DGR IR DP + K D I + +
Sbjct: 121 ------KLCRIRNKTVVKGGHIQLNLHDGRNHLIRVSDPTKAEEDVYKTGDVILMGIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
+I I F+VG + +TGG++ G I + EK + I +++A G +F T VF
Sbjct: 175 EIKAHIPFEVGKLAYITGGKHIGEFAKIVDIEKRILYPDIITLENADGEKFKTIKDYVFV 234
Query: 235 IG 236
+G
Sbjct: 235 VG 236
>gi|375083281|ref|ZP_09730307.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
gi|374742012|gb|EHR78424.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
Length = 248
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 137/250 (54%), Gaps = 6/250 (2%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +PS GPH + +PLI I+R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTQWYIERKTYKWAVRPSPGPHNMKTSIPLIYIIRDYLGYAKTGR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + VLVD +VR D +P G MDVVSIP+T E++R+ + G+ LH I +EEA
Sbjct: 61 EARKILNEGKVLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVFPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFK-LCKVRSVQFG-QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 177
K L K + K ++Q G ++ T D K +DT+ + + +I
Sbjct: 121 KIKPLRINNKRMVKGGNLQLNFHDGTNHLIKLSSLTDETKDQF-KTSDTVLMKVPEREIV 179
Query: 178 EFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 236
E + F++G V V G+N RVG I++ R G + + I+D G F T F +G
Sbjct: 180 EVLSFEIGAYVFVVQGKNVARVGKIVEVRHFPGGWPDVVTIEDKEGELFDTLKDYAFVLG 239
Query: 237 KGTKPWVSLP 246
K +P +SLP
Sbjct: 240 K-EEPKISLP 248
>gi|57641464|ref|YP_183942.1| 30S ribosomal protein S4e [Thermococcus kodakarensis KOD1]
gi|73919021|sp|Q5JJG0.1|RS4E_PYRKO RecName: Full=30S ribosomal protein S4e
gi|57159788|dbj|BAD85718.1| SSU ribosomal protein S4E [Thermococcus kodakarensis KOD1]
Length = 243
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 141/252 (55%), Gaps = 15/252 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +PS GPH + +PLI I+R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYIHRKAYKWAVRPSPGPHSMKTSIPLIYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + +LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNK 175
K L F++ R V+ + +N +DG ++ D K + T+ + + +
Sbjct: 121 K----LKPFRINNKRMVKGAKVQ---LNLHDGSNHLVSLAEKD-AYKTSYTVIMQVPERQ 172
Query: 176 ITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I + + F+VG V VT G+N R G I++ R+ G + + I+D G F T F
Sbjct: 173 IVKVLPFEVGAYVFVTQGKNVARKGKIVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFV 232
Query: 235 IGKGTKPWVSLP 246
IGK KP +SLP
Sbjct: 233 IGK-DKPEISLP 243
>gi|240104047|ref|YP_002960356.1| 30S ribosomal protein S4e [Thermococcus gammatolerans EJ3]
gi|239911601|gb|ACS34492.1| SSU ribosomal protein S4E (rps4E) [Thermococcus gammatolerans EJ3]
Length = 243
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 140/252 (55%), Gaps = 15/252 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +P GPH + +PLI I+R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPTSWYIHRKEYKWAVRPRPGPHSMQTSIPLIYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + +LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNK 175
K L F++ R V+ + +N +DG ++ D + + TI + + +
Sbjct: 121 K----LKPFRINNKRMVKGARVQ---LNLHDGSNHLVSLAEKDSF-RTSYTIIMKVPERE 172
Query: 176 ITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I E I F+VG V VT G+N R G I++ R G + + I+D G +F T F
Sbjct: 173 IIEVIPFEVGAYVFVTQGKNVARKGRIVEVRHFPMGWPDVVTIEDESGEKFDTLKEYAFV 232
Query: 235 IGKGTKPWVSLP 246
+GK KP +SLP
Sbjct: 233 VGK-EKPEISLP 243
>gi|288560121|ref|YP_003423607.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
gi|288542831|gb|ADC46715.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
Length = 244
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 135/247 (54%), Gaps = 10/247 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MA+ G +KHLKR NAPK W + + KP+ G H + LPL++I+R+ L A R
Sbjct: 1 MAKMGSRKHLKRYNAPKTWPIHPKEDTWTVKPAPGTHAINDSLPLLVIIRDILGIADNSR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E ++ +VL+D + + D +P GFMD++SIPKT EN+R+L DTKGR LH I E+A
Sbjct: 61 EAKRLINTGNVLIDGRAKKDYKFPVGFMDILSIPKTGENYRILLDTKGRLTLHPISAEDA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
+FKL K+ + + G +N +DGR + + A D + L++ +I E
Sbjct: 121 -------EFKLAKIVNKSTIKGGKTQLNLHDGRNVIVEEDNYSAYDVVCLNIPEQEIKEN 173
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKG 238
+F VV+VTGG++ G +G I+ + S T+ I+ A F T F IGK
Sbjct: 174 FEFGEDVVVLVTGGKHTGELGKIQEVIVDQSSKANTVIIEKANKDTFLTLKDYAFVIGK- 232
Query: 239 TKPWVSL 245
+P + L
Sbjct: 233 DEPAIDL 239
>gi|337283657|ref|YP_004623131.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
gi|334899591|gb|AEH23859.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
Length = 248
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 139/256 (54%), Gaps = 18/256 (7%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH + +PL+ I+R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHSMKTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + +LVD KVR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EARKILNEGKILVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPD------PLIKANDTIKLDL 171
K K ++R+ + + G +N +DG IR +DT+ + +
Sbjct: 121 K-------IKPFRIRNKRMVKGGNLQLNLHDGSNHLIRLSSLTDETKDRYHTSDTLIMRV 173
Query: 172 ETNKITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLG 230
+I E + F+VG V VT G+N R G I++ R G + + I+D G F T
Sbjct: 174 PEREIIEVLPFEVGAYVFVTQGKNVARKGRIVEIRHFPMGWPDVVTIEDEEGELFDTLKE 233
Query: 231 NVFTIGKGTKPWVSLP 246
F +GK + P +SLP
Sbjct: 234 YAFVVGKDS-PRISLP 248
>gi|414868312|tpg|DAA46869.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 161
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 75/83 (90%), Gaps = 2/83 (2%)
Query: 135 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 194
S++ KGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGN MVTGGR
Sbjct: 73 SIETNMKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGN--MVTGGR 130
Query: 195 NRGRVGIIKNREKHKGSFETIHI 217
N RVG+IK+REKHKGSFETIH+
Sbjct: 131 NTRRVGVIKHREKHKGSFETIHV 153
>gi|408381909|ref|ZP_11179456.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
gi|407815357|gb|EKF85942.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
Length = 241
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 10/250 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MA+ G +KHLKR AP+HW + + KPS GPH LPL++I+R+ LK A R
Sbjct: 1 MAKMGSRKHLKRFKAPEHWPIHPKEFTWTVKPSPGPHSIEGSLPLLVIVRDILKIADNAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E I+ VLVD + R D +P GFMDV+ +PK+ + +R++ D KG LH I + +
Sbjct: 61 EARIIINTGEVLVDGRARKDYKFPVGFMDVIQLPKSGKAYRVVPDEKGELVLHPIEEGDT 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
QFKLC++ + G +N +DGR + K D + L++ +I +
Sbjct: 121 -------QFKLCRIEDKVTIKGGKTQLNLHDGRNYLTEEDY-KTGDVVLLNVPDQEIKDT 172
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
IKF+ G + ++TGG++ G G +K + S + + F T VF +GK
Sbjct: 173 IKFEDGAIGLITGGKHIGEKGTVKEINITRSSMPNTVLIETDETTFQTLQEYVFVLGK-D 231
Query: 240 KPWVSLPKGK 249
KP +SLP G+
Sbjct: 232 KPVISLPGGQ 241
>gi|126465928|ref|YP_001041037.1| 30S ribosomal protein S4 [Staphylothermus marinus F1]
gi|189045360|sp|A3DNB9.1|RS4E_STAMF RecName: Full=30S ribosomal protein S4e
gi|126014751|gb|ABN70129.1| SSU ribosomal protein S4E [Staphylothermus marinus F1]
Length = 252
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 139/260 (53%), Gaps = 22/260 (8%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G KKHLK L APK W + + +A KPS GPH C PL++I+R+ L YA T R
Sbjct: 1 MARMGGKKHLKALVAPKFWPILRKEYKWAVKPSPGPHPIERCFPLLIIVRDILGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E ++ + H VD +VR + YP G MDV+ I T E +R++ L I EEA
Sbjct: 61 EARKLISEGHFKVDGRVRKNYKYPVGLMDVIEIVDTGETYRVIPVPVKVLGLIEIDKEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDL 171
K +KL ++ + + G +N +DGR I+ DP + K T+++ +
Sbjct: 121 K-------YKLSRIENKTTVKGGHIQLNLHDGRNVLIKVSDPKNPVEDIYKTLGTLQISI 173
Query: 172 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKG---SFETIHIQDALGHEFATR 228
+I +I D G +V+++GGRN GRVG K HKG + I+D G++F T
Sbjct: 174 PEQQILNYIPLDEGTLVIISGGRNVGRVG--KVVSIHKGIRRHRSIVTIEDKHGNKFQTS 231
Query: 229 LGNVFTIGKGTKPWVSLPKG 248
L VF IGK +P + LP+G
Sbjct: 232 LTYVFPIGK-EEPLIKLPEG 250
>gi|432114688|gb|ELK36527.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 269
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 81/103 (78%)
Query: 162 KANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 221
+ NDTI++DLET++IT+ IKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA
Sbjct: 165 RVNDTIQIDLETDRITDCIKFDAGNLCMVTGGANLGRIGMITNRERHPGSFDGVHVKDAN 224
Query: 222 GHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 264
G+ FA +L N F GKG KPW+SLP+GKGI L+I EE KR A
Sbjct: 225 GNSFAAQLSNSFVTGKGNKPWISLPRGKGICLTIAEERDKRLA 267
>gi|409096171|ref|ZP_11216195.1| 30S ribosomal protein S4e [Thermococcus zilligii AN1]
Length = 243
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 141/251 (56%), Gaps = 13/251 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W L + +A +P GPH +PL+ I+R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYLHRKEYKWAVRPMPGPHSMGTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + VLVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EAKKILNEGKVLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPD-PLIKANDTIKLDLETNKI 176
K L F++ R V+ G K +N +DG + + + + + T+ + + +I
Sbjct: 121 K----LKPFRITNKRMVK-GSKV--QLNLHDGSNHLVGFAEKDSFRTSYTVLMKVPEREI 173
Query: 177 TEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 235
E I F+VG V VT G+N R G +++ R+ G + + I+D G +F T F +
Sbjct: 174 VEVIPFEVGAYVFVTQGKNVARRGKVVEIRQFPMGWPDVVTIEDENGEKFDTLKEYAFVL 233
Query: 236 GKGTKPWVSLP 246
GK +P +SLP
Sbjct: 234 GK-DRPIISLP 243
>gi|344257870|gb|EGW13974.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 137
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 80/107 (74%)
Query: 158 DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
D LIK NDTI++DLET KI FIKFD GN+ MVTGG N GR G+I NRE+H GSF+ +H+
Sbjct: 6 DTLIKVNDTIQIDLETGKIAYFIKFDTGNLCMVTGGANLGRTGVITNRERHPGSFDVVHV 65
Query: 218 QDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 264
+DA G+ FATR N+ IGK KPW+SLP+GKG L+I EE ++ +
Sbjct: 66 KDANGNSFATRPSNILVIGKSNKPWISLPQGKGTCLTIAEERQEASS 112
>gi|15668645|ref|NP_247443.1| 30S ribosomal protein S4e [Methanocaldococcus jannaschii DSM 2661]
gi|1710764|sp|P54039.1|RS4E_METJA RecName: Full=30S ribosomal protein S4e
gi|1591170|gb|AAB98457.1| SSU ribosomal protein S4E [Methanocaldococcus jannaschii DSM 2661]
Length = 244
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 17/242 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E LPL+LI+R+ LKYA RE
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKIHKFTVRPLPGAHPMSESLPLLLIVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ VLVD +VR ++ P G MDVVS+P NEN+R+L+D KGR +L + +
Sbjct: 64 KIIKMGKVLVDGRVRKEEKLPVGLMDVVSLPDANENYRVLFDRKGRIKLKPTENPDV--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLETN 174
KLCK+++ + G +N +DGR I+ DP + K DT+ + +
Sbjct: 121 ------KLCKIKNKTVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
+I I F+VG + +TGG++ G I E+ + + +++ G +F T VF
Sbjct: 175 EIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERRGIYPDIVTLENMDGEKFKTVKDYVFV 234
Query: 235 IG 236
+G
Sbjct: 235 VG 236
>gi|256810634|ref|YP_003128003.1| 30S ribosomal protein S4e [Methanocaldococcus fervens AG86]
gi|256793834|gb|ACV24503.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
fervens AG86]
Length = 244
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 17/242 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E +PL+LI+R+ LKYA RE
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKVHKFTVRPLPGAHPMSESIPLLLIVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ VLVD +VR ++ P G MDVVS+P NEN+R+L+D KGR +L + +
Sbjct: 64 KIIKMGKVLVDGRVRKEEKLPVGLMDVVSLPDANENYRVLFDRKGRVKLKPTENPDV--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLETN 174
KLCK+++ + G +N +DGR I+ DP + K DT+ + +
Sbjct: 121 ------KLCKIKNKTVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
+I I F+VG + +TGG++ G I + EK + + +++ G +F T VF
Sbjct: 175 EIKAHIPFEVGKLAYITGGKHIGDFARIVDIEKRGIYPDIVTLENLEGDKFKTVKDYVFV 234
Query: 235 IG 236
+G
Sbjct: 235 VG 236
>gi|374635652|ref|ZP_09707246.1| Ribosomal protein S4E, central domain protein [Methanotorris
formicicus Mc-S-70]
gi|373561505|gb|EHP87738.1| Ribosomal protein S4E, central domain protein [Methanotorris
formicicus Mc-S-70]
Length = 244
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 17/242 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G +KHLKRL AP +W + + F +P GPH LPL+LI+R+ LKYA RE
Sbjct: 4 KGPRKHLKRLTAPSNWQIPRKVHKFVVRPLPGPHAMDGSLPLLLIVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ +LVD + R + +P GFMDV+SIP TNE+FR L+D KGR L + +
Sbjct: 64 KIIKMGKILVDGRKRKEHKFPVGFMDVISIPDTNEHFRALFDEKGRIVLRPTENPDV--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLETN 174
KLC++++ + G +N +DGR IR +P + K D + + +
Sbjct: 121 ------KLCRIKNKTVVKGGHIQLNLHDGRNHLIRVSNPTKAEEDVYKTGDVVLMGVPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
+I I F+VG + +TGG++ G I + EK + I ++++ G +F T VF
Sbjct: 175 EIKAHIPFEVGKLAYITGGKHIGEFVKIVDIEKRVFYPDIITLENSDGEKFKTIKDYVFV 234
Query: 235 IG 236
IG
Sbjct: 235 IG 236
>gi|341582050|ref|YP_004762542.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
gi|340809708|gb|AEK72865.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
Length = 243
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 138/253 (54%), Gaps = 17/253 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +P GPH R +PL+ I+R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPNQWYISRKTYKWAVRPRPGPHSMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + +LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I ++EA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEKEA 120
Query: 120 KALILLFQFK-LCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETN 174
L K + K VQ +N +DG T+ D + A+ T+ + +
Sbjct: 121 NIKPLRISNKRMVKGAKVQ--------LNLHDGSNHLVTMDEKDRYMTAS-TVLMKVPER 171
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
++ E + F+VG V VT G+N R G +++ R+ G + + I+D G F T F
Sbjct: 172 EVIEVLPFEVGAYVFVTQGKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAF 231
Query: 234 TIGKGTKPWVSLP 246
+GK KP +SLP
Sbjct: 232 VVGK-EKPEISLP 243
>gi|410721705|ref|ZP_11361035.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
gi|410598451|gb|EKQ53024.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
Length = 241
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 133/250 (53%), Gaps = 10/250 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MA+ G +KHLKR +P+HW + + KPS GPH LPL++I+R+ LK A R
Sbjct: 1 MAKMGSRKHLKRFKSPEHWPIHPKEFTWTVKPSPGPHSIEGSLPLLVIVRDILKIADNAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E I+ +LVD ++R D +P GFMDV+ +P + + +R++ + +G LH I EE
Sbjct: 61 EARIIINNGEILVDGRIRKDYKFPVGFMDVIQLPTSGKAYRVVPNERGTLVLHPI--EEG 118
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
+FKLC++ + G +N +DGR + K D + L++ +I E
Sbjct: 119 NT-----EFKLCRIEDKVTIKGGKTQLNLHDGRNYLTEEDY-KTGDVVVLNVPDQEIKET 172
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
IKF+ G + ++TGG++ G G +K + S + + G F T VF +GK
Sbjct: 173 IKFEDGAIGLITGGKHIGEKGTVKEINITRSSMPNTILIETDGTTFQTLQEYVFVLGK-D 231
Query: 240 KPWVSLPKGK 249
KP +SLP G+
Sbjct: 232 KPMISLPGGQ 241
>gi|449707481|gb|EMD47134.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
Length = 112
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 78/106 (73%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
ML KLGG FAPKPS GPH +ECLPLILILRNRL YAL REV I+ R + +D K+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
D YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK +
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKVCFI 106
>gi|289193204|ref|YP_003459145.1| ribosomal protein S4E, central domain protein [Methanocaldococcus
sp. FS406-22]
gi|288939654|gb|ADC70409.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
sp. FS406-22]
Length = 244
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 129/242 (53%), Gaps = 17/242 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E LPL+LI+R+ LKYA RE
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKIHKFTVRPLPGAHPMSESLPLLLIIRDVLKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ VLVD +VR ++ P G MDVVS+P+ +EN+R+L+D KGR +L + +
Sbjct: 64 KIIKMGKVLVDGRVRKEEKLPVGLMDVVSLPEADENYRVLFDRKGRIKLKPTENPDV--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLETN 174
KLCK+++ + G +N +DGR I+ DP + K DT+ + +
Sbjct: 121 ------KLCKIKNKTVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
+I I F+VG + +TGG++ G I E+ + + +++ G +F T VF
Sbjct: 175 EIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERRGIYPDIVTLENMDGEKFKTVKDYVFV 234
Query: 235 IG 236
+G
Sbjct: 235 VG 236
>gi|389860661|ref|YP_006362901.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
gi|388525565|gb|AFK50763.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
Length = 250
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 136/251 (54%), Gaps = 17/251 (6%)
Query: 7 KHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
+HLK L AP +W + + + +PS GPH + LPL++++RN L YA T RE ++
Sbjct: 5 RHLKALAAPYYWPILRKEYKWTVRPSPGPHPTEYSLPLLIVVRNVLGYAETAREARRLIS 64
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ H +D +V D +P GFMDV+ I T+E +R++ I EEA
Sbjct: 65 EGHFEIDGRVVRDYKFPVGFMDVLRIKPTDEYYRVVPVPTKVIGFVKIPKEEA------- 117
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKAND------TIKLDLETNKITE 178
FKLC++++ + G +N +DGR IR DP D T++L L NKI +
Sbjct: 118 AFKLCRIQNKTTVKGGHIQLNLHDGRNVLIRVNDPRNPVEDVYETLGTVQLSLADNKIVD 177
Query: 179 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIH-IQDALGHEFATRLGNVFTIGK 237
++ N+V+++GGRN GRVG++K + G ++ I+D G+ F T L VF IG+
Sbjct: 178 YVPLAENNLVIISGGRNVGRVGLLKKVHRGMGVKRSVAVIEDKNGNLFQTSLSYVFVIGR 237
Query: 238 GTKPWVSLPKG 248
KP ++LP+
Sbjct: 238 -DKPLITLPEA 247
>gi|449703142|gb|EMD43643.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
gi|449709756|gb|EMD48960.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
Length = 106
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/103 (64%), Positives = 77/103 (74%)
Query: 19 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
ML KLGG FAPKPS GPH +ECLPLILILRNRL YAL REV I+ R + +D K+RT
Sbjct: 1 MLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRT 60
Query: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
D YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK
Sbjct: 61 DTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKV 103
>gi|212223224|ref|YP_002306460.1| 30S ribosomal protein S4e [Thermococcus onnurineus NA1]
gi|212008181|gb|ACJ15563.1| SSU ribosomal protein S4E [Thermococcus onnurineus NA1]
Length = 243
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 136/253 (53%), Gaps = 17/253 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH + +PL+ I+R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPNQWYIERKAYKWAVRPRPGPHSMKTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + +LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I ++EA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPITEKEA 120
Query: 120 KALILLFQFK-LCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETN 174
L K + K VQ +N +DG D + A T+ + +
Sbjct: 121 NIKPLRISNKRMVKGAKVQ--------LNLHDGSNHLVAFSEKDRFMTAY-TVLMKVPER 171
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
+I E I F+VG V VT G+N R G +++ R+ G + + I+D G F T F
Sbjct: 172 EIIEVIPFEVGAYVFVTQGKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAF 231
Query: 234 TIGKGTKPWVSLP 246
+GK KP +SLP
Sbjct: 232 VVGK-DKPEISLP 243
>gi|390960782|ref|YP_006424616.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
gi|390519090|gb|AFL94822.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
Length = 243
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 137/253 (54%), Gaps = 17/253 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W + + +A +P GPH + +PL+ I+R+ L YA T R
Sbjct: 1 MARKGAKRHLKRLAAPNQWYIHRKAYKWAVRPRPGPHSMKTSIPLLYIVRDYLGYARTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + +LVD +VR D +P G MDV+SIP+T E++R+L + G+ LH I ++EA
Sbjct: 61 EARKILNEGKILVDGRVRKDYKFPVGIMDVISIPETGEHYRVLPNRIGKLILHPISEKEA 120
Query: 120 KALILLFQFK-LCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETN 174
L K + K VQ +N +DG TI D + A T+ + +
Sbjct: 121 NIKPLRISNKRMVKGAKVQ--------LNLHDGSNHLVTIDEKDKYMTAY-TVLMKVPDR 171
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
++ E + F+VG V VT G+N R G +++ R+ G + + I+D G F T F
Sbjct: 172 EVIEVLPFEVGAYVFVTQGKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAF 231
Query: 234 TIGKGTKPWVSLP 246
+GK KP +SLP
Sbjct: 232 VVGK-DKPEISLP 243
>gi|14591522|ref|NP_143603.1| 30S ribosomal protein S4e [Pyrococcus horikoshii OT3]
gi|6647808|sp|O59430.1|RS4E_PYRHO RecName: Full=30S ribosomal protein S4e
gi|3258198|dbj|BAA30881.1| 243aa long hypothetical 30S ribosomal protein S4 [Pyrococcus
horikoshii OT3]
Length = 243
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 138/253 (54%), Gaps = 17/253 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPSSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + LVD KVR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EARKILNEGKFLVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLVLHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLETN 174
K ++R+ + + +N +DG + PL + ++ T+ + +
Sbjct: 121 -------NIKPLRIRNKRMVKGAKVQLNFHDGTN--HLIPLTEKDNYFTSYTVLMKVPER 171
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
+I E + F+ G V VT G+N R G I++ ++ G + + I+D G F T F
Sbjct: 172 EIMEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAF 231
Query: 234 TIGKGTKPWVSLP 246
+GK KP +SLP
Sbjct: 232 VVGK-DKPKISLP 243
>gi|429963313|gb|ELA42857.1| hypothetical protein VICG_00172 [Vittaforma corneae ATCC 50505]
Length = 255
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 125/238 (52%), Gaps = 8/238 (3%)
Query: 27 FAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGF 86
+A +P GPH +PL ++ L+ A T +EV I R + V+ K T +P G
Sbjct: 16 YAIRPLPGPHSKELSIPLKYVIARFLRVANTAKEVDYIASSRMIAVNGKEITSIKFPVGL 75
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
DVV+I KTN++FRL ++ +F+LH I +EAK ++ KV S ++ IP
Sbjct: 76 FDVVTILKTNQHFRLYFNANRKFKLHKISSDEAKV-------RISKVVS-KYTNDSIPMT 127
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
+T DG ++ DP IK NDT+K+D+ TN+I + F+ G + V G N GR+G IK +
Sbjct: 128 HTKDGYNFKFADPSIKINDTVKIDIATNRIVGHLPFEAGKIGYVFSGPNAGRIGTIKYID 187
Query: 207 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 264
+ E +QD F+ + V IG+ +S+ + GI+L+ E + + A
Sbjct: 188 RSPDGKEIAFLQDPREKPFSVSMDKVMVIGESNSLLISMDENDGIRLNAFEISNNKYA 245
>gi|297527395|ref|YP_003669419.1| 30S ribosomal protein S4E, central domain-containing protein
[Staphylothermus hellenicus DSM 12710]
gi|297256311|gb|ADI32520.1| Ribosomal protein S4E, central domain protein [Staphylothermus
hellenicus DSM 12710]
Length = 252
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 140/260 (53%), Gaps = 22/260 (8%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G KKHLK L AP+ W + + +A KPS GPH + C PL++++R+ L YA T R
Sbjct: 1 MARMGGKKHLKALAAPRFWPILRKEYKWAVKPSPGPHPTERCFPLLIVVRDILGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E ++ + H VD ++R + YP G MDV+ I T + +R++ L I EEA
Sbjct: 61 EARKLISEGHFKVDGRIRKNYKYPVGLMDVIEIVDTGQTYRVIPVPVKVLGLIEIDKEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDL 171
K +KL ++ + + G +N +DGR I+ DP + K T+++ +
Sbjct: 121 K-------YKLSRIENKTTVKGGHIQLNLHDGRNVLIKVGDPKNPVEDIYKTLGTLQITI 173
Query: 172 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKG---SFETIHIQDALGHEFATR 228
+I +I + G +V+++GGRN GRVG K HKG + I+D G++F T
Sbjct: 174 PEQQILNYIPLEEGMLVIISGGRNVGRVG--KVVSIHKGIRRHRSIVTIEDKHGNKFQTS 231
Query: 229 LGNVFTIGKGTKPWVSLPKG 248
L VF IGK +P + LP+G
Sbjct: 232 LTYVFPIGK-EEPLIKLPEG 250
>gi|308813181|ref|XP_003083897.1| putative ribosomal protein S4 (ISS) [Ostreococcus tauri]
gi|116055779|emb|CAL57864.1| putative ribosomal protein S4 (ISS) [Ostreococcus tauri]
Length = 133
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 71/96 (73%), Gaps = 12/96 (12%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPS------------SGPHKSRECLPLILIL 48
MARG KKHLKRLNAPKHWMLDKLGG FAPKPS GPHK RECLPL LIL
Sbjct: 36 MARGPKKHLKRLNAPKHWMLDKLGGVFAPKPSPGACARPSKGPCEGPHKQRECLPLCLIL 95
Query: 49 RNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPA 84
RNRLKYALTY+EV ILMQR V VD K+R DK +P
Sbjct: 96 RNRLKYALTYKEVTTILMQRCVKVDGKIRMDKCFPC 131
>gi|261402344|ref|YP_003246568.1| 30S ribosomal protein S4e [Methanocaldococcus vulcanius M7]
gi|261369337|gb|ACX72086.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
vulcanius M7]
Length = 244
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 128/242 (52%), Gaps = 17/242 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G K+HLKRL AP W L + F +P G H E LPL++++R+ LKYA RE
Sbjct: 4 KGPKRHLKRLAAPVRWELPRKVHKFTVRPLPGAHPMSESLPLLIVVRDLLKYADNGREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ V VD +VR ++ P G MDVVS+P+ +EN+R+L+D KGR +L + +
Sbjct: 64 KIIKMGKVFVDGRVRKEEKLPVGLMDVVSLPEADENYRVLFDRKGRVKLKPTENPDV--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLETN 174
KLCK+++ + G +N +DGR I+ DP + K DT+ + +
Sbjct: 121 ------KLCKIKNKTVVKGGHIQLNLHDGRNVVIKVSDPTKAEEDVYKTGDTLLISIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
+I I F+VG + +TGG++ G I E+ + + +++ G +F T VF
Sbjct: 175 EIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERRGIYPDIVTLENMEGEKFKTVKDYVFV 234
Query: 235 IG 236
+G
Sbjct: 235 VG 236
>gi|84489695|ref|YP_447927.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
gi|121729294|sp|Q2NFW9.1|RS4E_METST RecName: Full=30S ribosomal protein S4e
gi|84373014|gb|ABC57284.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
Length = 241
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 126/242 (52%), Gaps = 9/242 (3%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIA 63
G +KHLKR APK W + K + K S+GPH E +PL+++LR+ L A RE
Sbjct: 5 GSRKHLKRFKAPKMWPIHKKEEVWTTKTSAGPHALEESIPLVMVLRDILGLAANSREAKI 64
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
IL VLVD R + +P GFMDV+SIPK N+ FR+L D KGR L I ++++
Sbjct: 65 ILNNSDVLVDGIPRKNHRFPVGFMDVISIPKINKTFRVLQDYKGRLVLKEIEEKDS---- 120
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 183
FKL K+ + G +N GR I D K D + L++ KI++ IKF+
Sbjct: 121 ---TFKLVKILGKTTIKGGKTQLNLEGGRNIIADDDY-KTGDVLLLNIPEQKISDSIKFE 176
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWV 243
G + ++TGG++ VG I + + S + + F T VF +G+ KP +
Sbjct: 177 EGALGLITGGKHISEVGKIDEIKITQSSKSNTVLMETEEGSFLTLARYVFVVGQ-DKPVI 235
Query: 244 SL 245
SL
Sbjct: 236 SL 237
>gi|14520545|ref|NP_126020.1| 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
gi|17369748|sp|Q9V1U8.1|RS4E_PYRAB RecName: Full=30S ribosomal protein S4e
gi|5457761|emb|CAB49251.1| rps4E SSU ribosomal protein S4E [Pyrococcus abyssi GE5]
gi|380741072|tpe|CCE69706.1| TPA: 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
Length = 243
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 138/253 (54%), Gaps = 17/253 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLETN 174
K ++R+ + + +N +DG + PL + ++ T+ + +
Sbjct: 121 -------NIKPLRIRNKRMVKGAKIQLNFHDGTN--HLIPLSEKDNYFTSYTVLMKVPER 171
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
+I E + F+ G V VT G+N R G I++ ++ G + + I+D G F T F
Sbjct: 172 EILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAF 231
Query: 234 TIGKGTKPWVSLP 246
+G+ KP +SLP
Sbjct: 232 VVGR-DKPRISLP 243
>gi|389853105|ref|YP_006355339.1| 30S ribosomal protein S4e [Pyrococcus sp. ST04]
gi|388250411|gb|AFK23264.1| RPS4, small subunit ribosomal protein S4e [Pyrococcus sp. ST04]
Length = 243
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 137/253 (54%), Gaps = 17/253 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH + +PL+ I+R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPPSWYIERKAYKWAVRPRPGPHNMKTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + LVD KVR D +P G MDVVSIP+T E++R+L ++ G+ LH I +EEA
Sbjct: 61 EARKILNEGKFLVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNSIGKLILHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLETN 174
K ++R+ + + +N +DG + PL + ++ T+ + +
Sbjct: 121 -------NIKPLRIRNKRMVKGAKIQLNFHDGTN--HLIPLSEKDNYFTSYTVLMKVPDR 171
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
+I E + F+ G V VT G+N R G I+ + G + + I+D G F T F
Sbjct: 172 EILEVLPFEKGAYVFVTQGKNVARKGRIVDIKRFPMGWPDVVTIEDEEGELFDTLKEYAF 231
Query: 234 TIGKGTKPWVSLP 246
+G+ KP +SLP
Sbjct: 232 VVGR-DKPKISLP 243
>gi|342905996|gb|AEL79281.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 92
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 73/90 (81%)
Query: 20 LDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTD 79
L KLGG FAP+PS+GPHK RECLPL++ LRNRLKYALT EV I+MQR + VD KVRTD
Sbjct: 1 LLKLGGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTNVEVTKIVMQRLIKVDGKVRTD 60
Query: 80 KTYPAGFMDVVSIPKTNENFRLLYDTKGRF 109
YPAGFMDV++I KT E FRL+YD KGR+
Sbjct: 61 PNYPAGFMDVITIEKTGEFFRLIYDVKGRY 90
>gi|332158011|ref|YP_004423290.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
gi|331033474|gb|AEC51286.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
Length = 243
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 135/252 (53%), Gaps = 15/252 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPPSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA
Sbjct: 61 EARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYP----DPLIKANDTIKLDLETNK 175
K ++R+ + + +N +DG P D + T+ + + +
Sbjct: 121 -------NIKPLRIRNKRMVKGAKVQLNFHDGTNHLVPFSEKDNYFTSY-TVLMKVPERE 172
Query: 176 ITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I E + F+ G V VT G+N R G I++ ++ G + + I+D G F T F
Sbjct: 173 ILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFV 232
Query: 235 IGKGTKPWVSLP 246
+G+ KP +SLP
Sbjct: 233 VGR-DKPKISLP 243
>gi|158187822|gb|ABW23200.1| ribosomal protein rps4 [Eurythoe complanata]
Length = 113
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 84/111 (75%), Gaps = 7/111 (6%)
Query: 98 NFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 157
NFR +YD KGRF +H I+ EEAK +KLC+V + + G KG+P++ T+D RTIRYP
Sbjct: 1 NFRPIYDVKGRFTVHRIQPEEAK-------YKLCRVGAWETGPKGVPFLVTHDARTIRYP 53
Query: 158 DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKH 208
DPLI+ ND++++D+ KI +FIKFD GN+ M+TGGRN GRVG++ +RE+H
Sbjct: 54 DPLIRVNDSVQVDIAAGKIKDFIKFDSGNLCMITGGRNLGRVGLVTHRERH 104
>gi|289597181|ref|YP_003483877.1| ribosomal protein S4E, central domain protein [Aciduliprofundum
boonei T469]
gi|289534968|gb|ADD09315.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
boonei T469]
Length = 236
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 128/243 (52%), Gaps = 11/243 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H+KRL AP+ W + + FAPK S GPH + E +PL+++LR L A RE I
Sbjct: 1 MSDHVKRLAAPRTWPIARKKYPFAPKVSPGPHGAHESIPLLVVLREILGIASNKREAKKI 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L R V VD +V D +P GFMDV+SI N+++R +YD G R+ I ++ A
Sbjct: 61 LNSRKVKVDGRVVRDVKFPIGFMDVISIGDINKHYRAVYDVNGNMRIVEIPEDHA----- 115
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
++KL ++ + G +N +DGR I + K D +K+ L T +I
Sbjct: 116 --EWKLVRIENKSVVPGGKIQLNLHDGRNILLDENKYKTGDVLKIKLPTQEILSHYPLAE 173
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 244
G+V +VTGG +RGRV IK + + + ++ G E R VF IG G KP ++
Sbjct: 174 GSVAIVTGGTHRGRVAHIKEYVVVRSPQDNM-VRFEEGFEIPKRY--VFVIGVG-KPEIT 229
Query: 245 LPK 247
+P+
Sbjct: 230 IPE 232
>gi|432329001|ref|YP_007247145.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
gi|432135710|gb|AGB04979.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
Length = 236
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 130/243 (53%), Gaps = 11/243 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H+KRL AP+ W + + FAPK S GPH + +P++++LR+ LK A RE I
Sbjct: 1 MSDHVKRLAAPRVWPIVRKKYTFAPKISPGPHPAERAVPMLIVLRDMLKLANNRREAKKI 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L R + VD +V TD +P GFMDV++I ++N+R +YD G R+ I + A
Sbjct: 61 LNSRKIKVDGRVVTDIKFPIGFMDVITIDDMDKNYRAVYDIYGNLRIVEIPKDNA----- 115
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
++KL ++ G +N +DGR I + D +K+ + T +I
Sbjct: 116 --EWKLVRIEDKHIVPGGKIQLNLHDGRNILLDENKYHTKDVLKIKVPTQEIIAHYPMAE 173
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 244
G+V ++ GG++RGRV IK +G + + ++ G E +R NVF IG G KP ++
Sbjct: 174 GSVAIIIGGKHRGRVAHIKEYVVVRGPQDNM-VKFEEGFEVNSR--NVFVIGVG-KPEIT 229
Query: 245 LPK 247
+P+
Sbjct: 230 IPE 232
>gi|407081049|gb|AFS89697.1| ribosomal protein S4, partial [Plutella xylostella]
Length = 92
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 74/92 (80%)
Query: 156 YPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 215
YPDPLIK ND+I+LD+ T +I + IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +
Sbjct: 1 YPDPLIKVNDSIQLDIATCRIMDIIKFDSGNLCMITGGRNLGRVGTIVSRERHPGSFDIV 60
Query: 216 HIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
HI+D GH FATRL NVF IGKGTK ++SLP+
Sbjct: 61 HIKDTTGHTFATRLNNVFIIGKGTKAYISLPR 92
>gi|390938979|ref|YP_006402717.1| 30S ribosomal protein S4E, central domain-containing protein
[Desulfurococcus fermentans DSM 16532]
gi|390192086|gb|AFL67142.1| Ribosomal protein S4E, central domain protein [Desulfurococcus
fermentans DSM 16532]
Length = 252
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 136/256 (53%), Gaps = 17/256 (6%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
+ G +HLK +NAP++W + + +A KPS GPH LPL++++R+ L YA T +E
Sbjct: 3 SMGGSRHLKAINAPRYWPILRKEYKWAVKPSPGPHPISRSLPLLILVRDMLGYAKTGKEA 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
++ + + +D +VR D +P G MDV+ I N+ +R++ L I EEA
Sbjct: 63 RRLIAEGYFKIDGRVRRDYKFPVGVMDVIEIVGINKYYRVIPVPTKVLGLIEISREEA-- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKANDT------IKLDLET 173
FKLC++ + + G +N +DGR IR DP DT +KL +
Sbjct: 121 -----SFKLCRIENKTTVKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPV 175
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNV 232
+I +++ G + +V+GGRN GRVG I + K + +I ++D G++F T L +
Sbjct: 176 QQILDYVPLKEGVIAIVSGGRNVGRVGKIVSIHKGMRRYRSIVTLEDKQGNKFQTSLDYI 235
Query: 233 FTIGKGTKPWVSLPKG 248
F IG KP + LP+G
Sbjct: 236 FPIGV-EKPLIKLPEG 250
>gi|414868034|tpg|DAA46591.1| TPA: hypothetical protein ZEAMMB73_160801 [Zea mays]
Length = 956
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 64/70 (91%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +F KFDVGN+
Sbjct: 886 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFFKFDVGNM 945
Query: 188 VMVTGGRNRG 197
VMVT G G
Sbjct: 946 VMVTAGGTPG 955
>gi|320101354|ref|YP_004176946.1| 30S ribosomal protein S4 [Desulfurococcus mucosus DSM 2162]
gi|319753706|gb|ADV65464.1| SSU ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
Length = 252
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 27/259 (10%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIA 63
G +HL LNAP++W + + + KPS GPH +PL++++RN L YA T RE
Sbjct: 5 GGSRHLNALNAPRYWPILRKEYKWVVKPSPGPHAIERSIPLLVLVRNVLGYAETAREARR 64
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
++ H VD KVR D +P G MDV+ + +T E +R++ L I EEA
Sbjct: 65 LIAGGHFKVDGKVRKDYKFPVGLMDVIEVVETGELYRVIPVPTRVLGLVKIPREEA---- 120
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-------------TIKLD 170
FKLC++ + + G +N +DGR + L++ ND +KL
Sbjct: 121 ---SFKLCRIENKVTVKGGHIQLNLHDGRNL-----LVRVNDARNPVEDVYETLGAVKLS 172
Query: 171 LETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRL 229
+ ++ ++I G + +V+GGRN GRVG + + + + +I I+D G+ F T L
Sbjct: 173 IPVQQLLDYIPLKEGVIAIVSGGRNVGRVGKVVSIHRGMKRYRSIVTIEDRSGNRFQTSL 232
Query: 230 GNVFTIGKGTKPWVSLPKG 248
+F IG KP ++LP+G
Sbjct: 233 DYIFPIGL-EKPLITLPEG 250
>gi|148642809|ref|YP_001273322.1| 30S ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
gi|222445040|ref|ZP_03607555.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
DSM 2375]
gi|261350391|ref|ZP_05975808.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
gi|189045354|sp|A5UL76.1|RS4E_METS3 RecName: Full=30S ribosomal protein S4e
gi|148551826|gb|ABQ86954.1| ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
gi|222434605|gb|EEE41770.1| Ribosomal family S4e [Methanobrevibacter smithii DSM 2375]
gi|288861174|gb|EFC93472.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
Length = 242
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 12/247 (4%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MA+ G +KHLK APK W + + KPS+G H L L L++R+ LK A R
Sbjct: 1 MAKMGSRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E I+ +VLVD +V D +P GFMD++ IPKT E +R+L D KGR +L+ I + ++
Sbjct: 61 EAKRIINSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKIEENDS 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
KLCK+ + + G +N +DG+ + + D I L + ++I E
Sbjct: 121 ---------KLCKIVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEV 171
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKG 238
+ G V++TGG++ G +G + ++ S TI I+++ EF T F +G+
Sbjct: 172 FELKEGACVLITGGKHTGELGTVSEIIVNESSNPNTIIIENSAKDEFLTLKDYAFVVGED 231
Query: 239 TKPWVSL 245
P +SL
Sbjct: 232 A-PAISL 237
>gi|390460190|ref|XP_003732439.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Callithrix jacchus]
Length = 231
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 131/274 (47%), Gaps = 66/274 (24%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLK APKHWM DKL AP+P G H+ R NRLK+ LT E
Sbjct: 1 MARGPKKHLKPAAAPKHWMPDKLQ-VSAPRP--GLHQLRX---------NRLKHTLTGDE 48
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
V + +Q + D +VR D T+P+GF+DV+ + +T E+FRL +DT R H
Sbjct: 49 VKYVCVQHFIRTDGQVRVDGTHPSGFLDVIRMEQTGEHFRLAHDTNSRLASH-------- 100
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
+ GR + AN T+++ + T +
Sbjct: 101 --------------------------RRHGGRLL--------ANGTVQVQGRAREST--M 124
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+ G +VT +I NRE+ GS +H++ G+ FAT L ++F G G
Sbjct: 125 KFNTGTGCVVT-------ACVISNRERQAGSSRVVHLKGDGGNSFATSLSSIFVTGNGNT 177
Query: 241 PWVSLPKGKGIKLSIIEEAR---KRQALATSAAA 271
PW+SL K I+L +++ R KR + +T+ A+
Sbjct: 178 PWISLCGAKAIQLILLKXERLTTKRSSGSTAVAS 211
>gi|388281854|dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyrus pyrifolia var.
culta]
Length = 90
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/70 (88%), Positives = 66/70 (94%)
Query: 189 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 248
M GG NRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPW+SLPKG
Sbjct: 8 MGAGGWNRGRVGVIKNREKHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWISLPKG 67
Query: 249 KGIKLSIIEE 258
KGIKL+IIEE
Sbjct: 68 KGIKLTIIEE 77
>gi|134045213|ref|YP_001096699.1| 30S ribosomal protein S4e [Methanococcus maripaludis C5]
gi|189045352|sp|A4FWA9.1|RS4E_METM5 RecName: Full=30S ribosomal protein S4e
gi|132662838|gb|ABO34484.1| SSU ribosomal protein S4E [Methanococcus maripaludis C5]
Length = 244
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 128/251 (50%), Gaps = 18/251 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ +L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L +A
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLKKTDKADA--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETN 174
KLCK+ + + G +N +DGR + + + K D++ + +
Sbjct: 121 ------KLCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I + F G + VTGG++ G I E + + +++ G +F T VF
Sbjct: 175 SIVGHVAFGEGKLAYVTGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFI 234
Query: 235 IGKGTKPWVSL 245
+G+ +P +S+
Sbjct: 235 VGQ-DEPVISM 244
>gi|150402580|ref|YP_001329874.1| 30S ribosomal protein S4e [Methanococcus maripaludis C7]
gi|189045353|sp|A6VGZ7.1|RS4E_METM7 RecName: Full=30S ribosomal protein S4e
gi|150033610|gb|ABR65723.1| Ribosomal protein S4E, central [Methanococcus maripaludis C7]
Length = 244
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 128/251 (50%), Gaps = 18/251 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ +L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L +A
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLKKTDKTDA--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETN 174
KLCK+ + + G +N +DGR + + + K D++ + +
Sbjct: 121 ------KLCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I + F G + VTGG++ G I E + + +++ G +F T VF
Sbjct: 175 SIVGHVAFGEGKLAYVTGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFI 234
Query: 235 IGKGTKPWVSL 245
+G+ +P +S+
Sbjct: 235 VGQ-DEPVISM 244
>gi|336121758|ref|YP_004576533.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
gi|334856279|gb|AEH06755.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
Length = 247
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 17/243 (6%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
++G K+HLKRL AP +W L + F + GPH LPL+LI+R+ L YA RE
Sbjct: 3 SKGPKRHLKRLPAPTNWQLPRKVKKFTTRALPGPHSMDNSLPLLLIVRDILGYADNAREA 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ +LVD R + YPAG MDV+SIP TNENF +L D KGR L +
Sbjct: 63 KKIIKMGKILVDGVKRKEHRYPAGLMDVISIPDTNENFLVLLDEKGRITLKKTDKNDV-- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--------IRYPDPLIKANDTIKLDLET 173
KLCK+++ + G +N +DGR + + + K D + + +
Sbjct: 121 -------KLCKIKNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDIYKTGDCVLISIPE 173
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
+I ++F G + +TGG++ G I EK K + I ++ G +F T VF
Sbjct: 174 QEIVGHVQFGEGKLAYITGGKHAGDFAKIIEIEKRKLYPDIITLETKDGEQFKTIKDYVF 233
Query: 234 TIG 236
+G
Sbjct: 234 VVG 236
>gi|288931522|ref|YP_003435582.1| ribosomal protein S4E, central domain protein [Ferroglobus placidus
DSM 10642]
gi|288893770|gb|ADC65307.1| Ribosomal protein S4E, central domain protein [Ferroglobus placidus
DSM 10642]
Length = 232
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KRL+APK + + + KPS GPH ++E +PL++I+R+ L+ A T RE I+
Sbjct: 2 HQKRLSAPKTIKVPRKVSKWIVKPSPGPH-NKEAVPLLVIVRDYLQLADTAREARRIIAA 60
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+LVD R D +P G DVVS+PK + N+R+++D KGR+ I D +
Sbjct: 61 GEILVDGVPRKDYKFPVGLFDVVSVPKLDLNYRIVFDEKGRYVPIEITDPD--------- 111
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
KL K+ + G +N +DG I + K D+I + + +I + +KF+ G +
Sbjct: 112 LKLYKITGKTMVKGGRIQLNLFDGTNILASNEY-KTKDSILMKIPEKEIVDHLKFEEGAL 170
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK--GTKPWVSL 245
VMVTGG + G +GI+K + + S + + G+EF T VF IGK TKP + L
Sbjct: 171 VMVTGGTHAGEIGILKEYKIVRSSAPNLVTIEVEGNEFTTIEDYVFVIGKKGETKPVIQL 230
>gi|110456358|gb|ABG74702.1| ribosomal protein S4-like protein [Diaphorina citri]
Length = 104
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 167 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 226
I+ ++ T+KI + I+FD GN+ M+TGGRN GRVG + NRE+H GSF+ +H++D GH FA
Sbjct: 1 IQYEIATSKIIDHIRFDTGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHVKDGNGHVFA 60
Query: 227 TRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 272
TRL NVF IGKGTK ++SLPKGKGIKL+I EE KR LA AA+
Sbjct: 61 TRLNNVFIIGKGTKAYISLPKGKGIKLTISEERDKR--LAAKAASS 104
>gi|159905645|ref|YP_001549307.1| 30S ribosomal protein S4e [Methanococcus maripaludis C6]
gi|226697783|sp|A9A9Q2.1|RS4E_METM6 RecName: Full=30S ribosomal protein S4e
gi|159887138|gb|ABX02075.1| Ribosomal protein S4E, central domain protein [Methanococcus
maripaludis C6]
Length = 244
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 128/251 (50%), Gaps = 18/251 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDILKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ +L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L +A
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLKKTDKTDA--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETN 174
KLCK+ + + G +N +DGR + + + K D++ + +
Sbjct: 121 ------KLCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I + F G + +TGG++ G I E + + +++ G +F T VF
Sbjct: 175 SIVGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFI 234
Query: 235 IGKGTKPWVSL 245
+G+ +P +S+
Sbjct: 235 VGQ-DEPVISM 244
>gi|302348026|ref|YP_003815664.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
gi|302328438|gb|ADL18633.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
Length = 250
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 18/258 (6%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G +HLK L+AP + + + KPS GPH + LPL++++R+ LKYA T R
Sbjct: 1 MARMGGSRHLKALSAPSVQRIPRKVRPWTVKPSPGPHPADRSLPLLIVIRDLLKYAETAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E I+ V VD KV D +P G MD+V +P N +R++ D G RL I EEA
Sbjct: 61 EATKIISSGQVKVDGKVVRDYKFPIGVMDIVELPSLNLYYRVVPDPTGTLRLVPISKEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTI-------RYPDPL-IKANDTIKLDL 171
KL ++ V + G ++ DGR + R P L K D++ L++
Sbjct: 121 -------SLKLLRIEGVTTLKGGHFQVHLSDGRNVLVRVEDSRKPGQLPYKPLDSLVLNV 173
Query: 172 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLG 230
+ + I+F G++ +V GRN G++G I + + G ++ +QD+ G+ F T L
Sbjct: 174 PEGTVKDHIEFKEGSLALVVWGRNMGKLGKIVSVTRGWGWDRSVASLQDSAGNSFETSLS 233
Query: 231 NVFTIGKGTKPWVSLPKG 248
N++ +G+ KP V++ +G
Sbjct: 234 NIYVVGR-DKPVVTVTQG 250
>gi|62002191|gb|AAX58703.1| 40S ribosomal protein S4 [Hydractinia echinata]
Length = 91
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 74/90 (82%)
Query: 139 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 198
G+K +PYI T+D RTIRYPDP IK NDT+ +D++T K+T+FIKFD GN VMV GGRN GR
Sbjct: 2 GKKSVPYIVTHDARTIRYPDPSIKINDTVVIDVKTGKVTDFIKFDTGNTVMVIGGRNTGR 61
Query: 199 VGIIKNREKHKGSFETIHIQDALGHEFATR 228
VGII +RE+H S++ +HI+DA G++FATR
Sbjct: 62 VGIITHRERHASSYDIVHIKDAAGNQFATR 91
>gi|18978184|ref|NP_579541.1| 30S ribosomal protein S4 [Pyrococcus furiosus DSM 3638]
gi|397652540|ref|YP_006493121.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
gi|22096123|sp|Q8U011.1|RS4E_PYRFU RecName: Full=30S ribosomal protein S4e
gi|428697934|pdb|3J20|E Chain E, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18893993|gb|AAL81936.1| SSU ribosomal protein S4E [Pyrococcus furiosus DSM 3638]
gi|393190131|gb|AFN04829.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
Length = 243
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 134/252 (53%), Gaps = 15/252 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T R
Sbjct: 1 MARKGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E IL + LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I ++EA
Sbjct: 61 EARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEDEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNK 175
K ++R+ + + +N +DG +I D + T+ + + +
Sbjct: 121 -------FIKPLRIRNKRMIKGARVQLNFHDGTNHIVSIAEKDNYFTSY-TVLMKVPERE 172
Query: 176 ITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I E + F+ G V VT G+N R G I++ + G + + I+D G F T F
Sbjct: 173 ILEVLPFEKGAYVFVTQGKNVARKGRIVEIKRFPMGWPDVVTIEDEEGELFDTLKEYAFV 232
Query: 235 IGKGTKPWVSLP 246
+G KP +SLP
Sbjct: 233 VGT-DKPKISLP 243
>gi|284162448|ref|YP_003401071.1| 30S ribosomal protein S4E, central domain-containing protein
[Archaeoglobus profundus DSM 5631]
gi|284012445|gb|ADB58398.1| Ribosomal protein S4E, central domain protein [Archaeoglobus
profundus DSM 5631]
Length = 232
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 132/240 (55%), Gaps = 13/240 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KRL+APK + + + + KPS GPH ++E +PL++++R+ L+ A T RE I+
Sbjct: 2 HQKRLSAPKTYKIPRKIFKWTVKPSPGPH-NKEAVPLLIVVRDYLQLADTAREARRIIAS 60
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+LVD R D +P G DV+ IPK N+++R+++D KGR+ I D+ K
Sbjct: 61 GEILVDGVPRKDYKFPVGLFDVIKIPKLNKSYRMVFDEKGRYVPIEIEDDNLKL------ 114
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
+K+ +++ G+ +N +DG + D K D+I +++ KI +++ F++G +
Sbjct: 115 YKIVNKTTIKGGRI---QLNLFDGTNV-LGDNSFKTKDSILMEIPEKKIVDYLPFEIGAL 170
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK--GTKPWVSL 245
VM+TGG + G +G IK+ + + S + + G E T VF IGK KP + L
Sbjct: 171 VMITGGTHAGEIGRIKDYKIVRSSSPNLVTVEVEGRELTTIEDYVFVIGKKDDEKPVIDL 230
>gi|150399473|ref|YP_001323240.1| 30S ribosomal protein S4e [Methanococcus vannielii SB]
gi|133944|sp|P14023.1|RS4E_METVA RecName: Full=30S ribosomal protein S4e
gi|189045356|sp|A6UQ56.1|RS4E_METVS RecName: Full=30S ribosomal protein S4e
gi|44760|emb|CAA34692.1| unnamed protein product [Methanococcus vannielii]
gi|150012176|gb|ABR54628.1| Ribosomal protein S4E, central [Methanococcus vannielii SB]
Length = 244
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 131/251 (52%), Gaps = 18/251 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + F +PS GPH + LPL+LI+R+ LK A RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKERTFTVRPSPGPHSMDKSLPLLLIVRDTLKCADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ +L+D R + +P G MDV+SIP+ NEN+ +L+D GR S++ E +
Sbjct: 64 KIIQMGKILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRI---SLKKTEKTGV 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--------IRYPDPLIKANDTIKLDLETN 174
KLCK+ + + G +N +DGR ++ + + K D++ + L
Sbjct: 121 ------KLCKIVNKTVIKGGHIQLNLHDGRNQIVKVANALKAEEDIYKTGDSVLVSLPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
+ ++F+ G + +TGG++ G + EK + + +++ G +F T VF
Sbjct: 175 AVVGHVEFNEGKLAYITGGKHVGEFAKVVEVEKRTLYSDIVTLENKDGEKFKTIKPYVFI 234
Query: 235 IGKGTKPWVSL 245
+G+ +P +S+
Sbjct: 235 VGQ-DEPVISM 244
>gi|218884474|ref|YP_002428856.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
gi|254764558|sp|B8D5V8.1|RS4E_DESK1 RecName: Full=30S ribosomal protein S4e
gi|218766090|gb|ACL11489.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
Length = 252
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 134/256 (52%), Gaps = 17/256 (6%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
+ G +HLK +NAP++W + + + K S GPH LPL++++R+ L YA T +E
Sbjct: 3 SMGGSRHLKAINAPRYWPILRKEYRWVVKSSPGPHPISRSLPLLILVRDMLGYAKTGKEA 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
++ + + +D +VR D +P G MDV+ I N+ +R++ L I EEA
Sbjct: 63 RRLIAEGYFKIDGRVRRDYKFPVGVMDVIEIVGVNKYYRVIPVPTKVLGLIEISREEA-- 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLIKANDT------IKLDLET 173
FKLC++ + + G +N +DGR IR DP DT +KL +
Sbjct: 121 -----SFKLCRIENKTTVKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPV 175
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNV 232
+I +++ G + +V+GGRN GRVG I + K + +I ++D G++F T L +
Sbjct: 176 QQILDYVPLKEGVIAIVSGGRNVGRVGKIVSIHKGMRRYRSIVTLEDKQGNKFQTSLDYI 235
Query: 233 FTIGKGTKPWVSLPKG 248
F IG KP + LP+G
Sbjct: 236 FPIGV-EKPLIKLPEG 250
>gi|297619576|ref|YP_003707681.1| 30S ribosomal protein S4E [Methanococcus voltae A3]
gi|297378553|gb|ADI36708.1| Ribosomal protein S4E, central domain protein [Methanococcus voltae
A3]
Length = 244
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 18/252 (7%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
+G K+HLKRL AP +W + + F +P+ G H + LPL+LI+R+ LKYA RE
Sbjct: 3 VKGPKRHLKRLAAPANWQIPRKVRTFTVRPAPGSHAMDKSLPLLLIIRDVLKYADNSREA 62
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
I+ +L+D K R + P G MD++S+P NEN+ +L+D GR L + EEA
Sbjct: 63 KKIIQTGKILIDGKKRKEYKLPVGLMDLISVPLINENYVVLFDESGRLTLKKV--EEAGV 120
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLET 173
KLCK+ + + G +N +DGR + + + K D+I L +
Sbjct: 121 -------KLCKIVNKTVIKGGHIQLNLHDGRNQIITVADATKAEEDVYKTGDSILLSIPE 173
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVF 233
KI ++F + VTGG++ G I E+ K + I ++ G +F T VF
Sbjct: 174 QKIAGHVQFGENKLAYVTGGKHVGEFAKIIEIEERKLYADIITLETKDGEQFKTVKDYVF 233
Query: 234 TIGKGTKPWVSL 245
+G +P ++L
Sbjct: 234 IVGD-NEPVINL 244
>gi|435852126|ref|YP_007313712.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
gi|433662756|gb|AGB50182.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
Length = 237
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 10/241 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KR++ PK W + K + GPH + +PL ++LR+ L T E +
Sbjct: 1 MGKHQKRISVPKSWQISKKSNKWITSTRPGPHNRQLSIPLGVVLRDMLHVVDTRVEAKRV 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LVD +R D +P G +DVVSIPK +++R+L D KGR LH + E+
Sbjct: 61 LSEGSILVDGIIRKDLRFPIGLLDVVSIPKMEQSYRVLLDRKGRLELHKLEGTESS---- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
KLC++ + G +N DG + + KA D++ L + KI IK++V
Sbjct: 117 ----KLCRILGKTVIKGGKVQLNLNDGSNLIGSNDY-KAKDSVILSVPDKKILTHIKYEV 171
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 244
GN+ ++ GG++ G++G IK+ + S + G EF T V IG KP +
Sbjct: 172 GNLALIIGGKHTGKIGAIKDINTVRSSNSNTVLIAGEGEEFHTIEDYVVVIGT-DKPEIK 230
Query: 245 L 245
L
Sbjct: 231 L 231
>gi|20094656|ref|NP_614503.1| 30S ribosomal protein S4 [Methanopyrus kandleri AV19]
gi|22654091|sp|Q8TW18.1|RS4E_METKA RecName: Full=30S ribosomal protein S4e
gi|19887817|gb|AAM02433.1| Ribosomal protein S4E [Methanopyrus kandleri AV19]
Length = 260
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 4 GLKKHLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
G K+H+KRL AP W + K GG FAP+P GPH +PL++++R+ L YA RE
Sbjct: 7 GPKRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREAR 66
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ + + VD VR + +P G MDVV IP+T + +R++ + R + I +EEA+
Sbjct: 67 KIITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARV- 125
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDL--- 171
K+C++++ + + G I +DG+ + DP + D++ L+L
Sbjct: 126 ------KVCRIKNKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEP 179
Query: 172 ---ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFAT 227
E+ K+ + I F+ G V GR+ G VG + + +G E I +++ G +F T
Sbjct: 180 DSGESWKVVDHIPFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQT 239
Query: 228 RLGNVFTIGK 237
G + IGK
Sbjct: 240 TKGRLIAIGK 249
>gi|45358974|ref|NP_988531.1| 30S ribosomal protein S4e [Methanococcus maripaludis S2]
gi|340624721|ref|YP_004743174.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
gi|50403627|sp|P62428.1|RS4E_METMP RecName: Full=30S ribosomal protein S4e
gi|45047840|emb|CAF30967.1| SSU ribosomal protein S4E [Methanococcus maripaludis S2]
gi|339904989|gb|AEK20431.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
Length = 244
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 18/251 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G +KHLKRL AP +W L + F +PS GPH + LPL+L++R+ LKYA RE
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
I+ +L+D R + +PAG MDV+SIP+ +E + +L+D GR L +
Sbjct: 64 KIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKKTDKTDV--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETN 174
KLCK+ + + G +N +DGR + + + K D++ + +
Sbjct: 121 ------KLCKIVNKTVVKGGNIQLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I + F G + +TGG++ G I E + + +++ G +F T VF
Sbjct: 175 SIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFI 234
Query: 235 IGKGTKPWVSL 245
+G+ +P +S+
Sbjct: 235 VGQ-DEPVISM 244
>gi|307595641|ref|YP_003901958.1| 30S ribosomal protein S4 [Vulcanisaeta distributa DSM 14429]
gi|307550842|gb|ADN50907.1| Ribosomal protein S4E, central domain protein [Vulcanisaeta
distributa DSM 14429]
Length = 247
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 20/247 (8%)
Query: 7 KHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
+HL+R AP+ W + + +PS GPH + LPL L++R+ L+YA T RE ++
Sbjct: 4 RHLRRYQAPEWWPISTKEAVWVVRPSPGPHPLAKSLPLALLVRDVLRYAKTLREARYVIG 63
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ + VD KVR D YP G MDVV I TNE +R++ I EEA+
Sbjct: 64 KGLIKVDGKVRRDYKYPVGLMDVVEIVPTNEVYRMVPHPTKFLWPVLISQEEAR------ 117
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYP-------DPLIKANDTIKLDLETNKITEF 179
+KLC++ + + G +N +DGR I+ P D L D++ +D+ NKI ++
Sbjct: 118 -YKLCRIENKTMVKGGQIQLNLHDGRNIQLPYEEGSKYDTL----DSVLIDIAENKIVDY 172
Query: 180 IKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 238
+K ++G++ ++ G+N G G I + + ++ T+ I G E T + +F +GK
Sbjct: 173 VKLELGSLGLIVDGKNVGYYGKITEIVQTYRKRESTVKIITNEGKEVRTIVDYLFAVGK- 231
Query: 239 TKPWVSL 245
KP +++
Sbjct: 232 EKPLITI 238
>gi|2275282|gb|AAB63866.1| ribosomal protein S4 homolog [Schizosaccharomyces pombe]
Length = 81
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 65/81 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG KKH KR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL RE
Sbjct: 1 MVRGPKKHFKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKVRTDKT 81
V AILMQR + VD KVRTD T
Sbjct: 61 VKAILMQRLIKVDGKVRTDST 81
>gi|262401341|gb|ACY66573.1| ribosomal protein S4 [Scylla paramamosain]
Length = 93
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 70/87 (80%)
Query: 178 EFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
+ IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +H++DA+GH FATRL NVF IGK
Sbjct: 3 DIIKFDSGNLCMITGGRNLGRVGTIVSRERHAGSFDIVHVKDAVGHTFATRLNNVFVIGK 62
Query: 238 GTKPWVSLPKGKGIKLSIIEEARKRQA 264
G K +VSLP+GKGIKLSI EE +R A
Sbjct: 63 GNKAYVSLPRGKGIKLSIAEERDRRLA 89
>gi|116755004|ref|YP_844122.1| 30S ribosomal protein S4e [Methanosaeta thermophila PT]
gi|116666455|gb|ABK15482.1| SSU ribosomal protein S4E [Methanosaeta thermophila PT]
Length = 233
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 16/244 (6%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KR+ P+ W++ + + P GPH + E LPL++++R+ LK A REV IL +
Sbjct: 2 HRKRVTIPRSWLIPRKTSKWIATPRPGPHSAEESLPLMVVVRDLLKLADNAREVKRILHE 61
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD VR D +P G DV+++P N+ +R++ TKG F L I+ + + L+ +
Sbjct: 62 GGVLVDGTVRRDARFPVGLFDVITVPALNKQYRMVKSTKGYFVLIEIQPDTPRKLVRVEN 121
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
K +Q +N DG I + + D++ + L I + IKF+VGN+
Sbjct: 122 KTTLKGNRMQ--------LNLSDGSNI-IAEGDVGTGDSLLISLPERSIEDIIKFEVGNL 172
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFE---TIHIQDALGHEFATRLGNVFTIGKGTKPWVS 244
MVTGG + G G IK+ + + S TI D + T + VF IG+ P +
Sbjct: 173 AMVTGGSHTGMTGRIKSVQIVRSSMPNRVTISTDDG---DIETIIDYVFVIGRDA-PVIE 228
Query: 245 LPKG 248
L G
Sbjct: 229 LEAG 232
>gi|296242597|ref|YP_003650084.1| 30S ribosomal protein S4 [Thermosphaera aggregans DSM 11486]
gi|296095181|gb|ADG91132.1| SSU ribosomal protein S4E [Thermosphaera aggregans DSM 11486]
Length = 252
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 129/254 (50%), Gaps = 17/254 (6%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIA 63
G KHLK + AP++W + + + KPS GPH +PL+LI+R+ L+ A T +E
Sbjct: 5 GGSKHLKSIAAPRYWPILRKEYKWVVKPSPGPHAIARSIPLLLIVRDVLRLAKTGKEARR 64
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
++ + + +D KVR D +P G MDV+ + TNE +R++ L I EEA
Sbjct: 65 LISEGYFKIDGKVRRDYKFPVGMMDVIEVVGTNEYYRVVPVPTKVLDLVKIAKEEA---- 120
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTI--RYPDPLIKAND------TIKLDLETNK 175
FKL ++ + G +N +DGR I R DP D T+++ L +
Sbjct: 121 ---SFKLVRIEDKTTVKNGHIQLNLHDGRNILVRVSDPRNPVEDVYETLGTLQIALPGQE 177
Query: 176 ITEFIKFDVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I +I+ G + +++GGRN GRVG I+ + + I+D G + T L +F
Sbjct: 178 ILNYIQLKEGVIAIISGGRNVGRVGRIVSIHRGMRRHRSIVTIEDKNGVKVQTSLDYIFP 237
Query: 235 IGKGTKPWVSLPKG 248
IG KP ++LP+G
Sbjct: 238 IGV-EKPLITLPEG 250
>gi|156938197|ref|YP_001435993.1| 30S ribosomal protein S4 [Ignicoccus hospitalis KIN4/I]
gi|189045350|sp|A8ACD4.1|RS4E_IGNH4 RecName: Full=30S ribosomal protein S4e
gi|156567181|gb|ABU82586.1| SSU ribosomal protein S4E [Ignicoccus hospitalis KIN4/I]
Length = 255
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 135/260 (51%), Gaps = 20/260 (7%)
Query: 1 MAR--GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTY 58
MAR G K+HLKRL AP W + + +A KP GPH E +PL++++R+ L YA T
Sbjct: 1 MARVGGGKRHLKRLAAPAFWPIHRKEAVWAVKPRPGPHPIEESIPLLILVRDVLGYAETS 60
Query: 59 REVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEE 118
RE ++ + + VD +VR D +P G MDV+ I +E +R++ I EE
Sbjct: 61 REARKLIAEGRIKVDGRVRKDYKFPVGAMDVIEIVGADEYYRMIPYPVKYLVPMRIDAEE 120
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP--LIKANDT-----IKL 169
AK K+C++ + + G +N +DGR IR DP ++A + + +
Sbjct: 121 AKK-------KICRIENKVTVKGGHVQLNLHDGRNVLIRVEDPRNPVEAQEYKTLGGLLI 173
Query: 170 DLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATR 228
+ +I +++ F+ G + +V GRN GRVG I+ K G +T + ++D F T
Sbjct: 174 TVPEQEILDYVPFEEGVIAIVKSGRNVGRVGRIEEIVKGMGRKKTLVKMRDVHDEVFYTV 233
Query: 229 LGNVFTIGKGTKPWVSLPKG 248
VF IGK +P + LP+G
Sbjct: 234 AEYVFPIGK-EEPLIKLPEG 252
>gi|282164903|ref|YP_003357288.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
gi|282157217|dbj|BAI62305.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
Length = 234
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 108/200 (54%), Gaps = 10/200 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +HLKR+ AP+ W + + + KPS GPH +PLI++LR+ L A +E+ I
Sbjct: 1 MSQHLKRVAAPRSWPITRKTSKWVAKPSPGPHSEEYGMPLIVVLRDLLHVADKAKEIKQI 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + VLVD KVR D +P G DV+SIP + N+R++ G+F+L + D +K L +
Sbjct: 61 LHEGKVLVDGKVRKDHHFPVGLFDVISIPDISANYRVMIGQDGKFKLVPVSDANSKLLKI 120
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+ + + R+ +N +DG T+ + D+I L + I + K++V
Sbjct: 121 VNKTTVTGGRT---------QLNFHDGTTMLASNDY-HTKDSIILKVPEKSIDQHFKYEV 170
Query: 185 GNVVMVTGGRNRGRVGIIKN 204
G+ VTGG++ G VG IK
Sbjct: 171 GSTAFVTGGKHAGVVGKIKE 190
>gi|11499497|ref|NP_070738.1| 30S ribosomal protein S4e [Archaeoglobus fulgidus DSM 4304]
gi|3914913|sp|O28366.1|RS4E_ARCFU RecName: Full=30S ribosomal protein S4e
gi|2648630|gb|AAB89340.1| SSU ribosomal protein S4E (rps4E) [Archaeoglobus fulgidus DSM 4304]
Length = 235
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 128/240 (53%), Gaps = 13/240 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KRL+APK + + + + KPS GPH ++E +PL++++R+ L+ A T RE I+
Sbjct: 5 HQKRLSAPKTYKIPRKVSKWVVKPSPGPH-NKEAIPLLVLVRDFLELADTGREARRIISA 63
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+LVD VR D +P G DVV+IPK +++R+L+D KGR+ + D +
Sbjct: 64 GEILVDGVVRKDYKFPVGLFDVVTIPKLEKSYRILFDEKGRYIPKEVEDAD--------- 114
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
KL K+ + + G +N +DG I + K D+I L + ++ + +KF+ G +
Sbjct: 115 LKLYKITNKTLVRGGKVQLNLFDGTNILGSNDY-KTKDSILLRIPEKEVVDHLKFEEGAL 173
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK--GTKPWVSL 245
VM+TGG + G +G IK+ + + S + + + T VF +GK KP + L
Sbjct: 174 VMITGGTHAGEIGRIKSYKIVRSSAPNLVTVEGEERDITTIEDYVFVVGKKDSDKPVIDL 233
>gi|147919321|ref|YP_686943.1| 30S ribosomal protein S4e [Methanocella arvoryzae MRE50]
gi|121690304|sp|Q0W1X6.1|RS4E_UNCMA RecName: Full=30S ribosomal protein S4e
gi|110622339|emb|CAJ37617.1| 30S ribosomal protein S4E [Methanocella arvoryzae MRE50]
Length = 234
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 16/245 (6%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
HLKR+ AP+ W + + + KP G H +PL+++LR+ LK A E+ IL +
Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD KVR D Y G D +SIP N N+R++ G+F L + D A
Sbjct: 65 GKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKFHLVPVTDASA-------- 116
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
K+CK+ + + G +N +DG T+ + K D++ L + KI + + VG++
Sbjct: 117 -KICKIVNKTALRGGKIQLNLHDGTTMIASNDY-KTKDSVILKMPERKIDQHFTYAVGSL 174
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
VMVT G++ G +G +K + + S + +F T VF IGK + P
Sbjct: 175 VMVTEGKHSGEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDS------PA 228
Query: 248 GKGIK 252
+G+K
Sbjct: 229 VQGVK 233
>gi|150401818|ref|YP_001325584.1| 30S ribosomal protein S4 [Methanococcus aeolicus Nankai-3]
gi|189045351|sp|A6UWV0.1|RS4E_META3 RecName: Full=30S ribosomal protein S4e
gi|150014521|gb|ABR56972.1| Ribosomal protein S4E, central [Methanococcus aeolicus Nankai-3]
Length = 244
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 18/251 (7%)
Query: 3 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62
+G +KHLKRL APK+W + + + +PS+GPH LPL+L+LR+ L YA RE
Sbjct: 4 KGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAREAK 63
Query: 63 AILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKAL 122
++ VLVD R D YP G MDV+S+P NE+F ++ D KGR +L+ I+D
Sbjct: 64 KVIKMGKVLVDGVKRKDHRYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTK--- 120
Query: 123 ILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--------IRYPDPLIKANDTIKLDLETN 174
KLCK+ + + G +N +DGR + + + K D + L +
Sbjct: 121 ------KLCKIENKTVIKGGHIQLNLHDGRNQIVKLADATKAEEDIYKTGDCVILSIPEQ 174
Query: 175 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 234
I ++F G + +TGG++ G I EK + + I ++ G +F T VF
Sbjct: 175 SIVGHVQFGEGKLAYITGGKHVGDFAKIIGIEKKQLYPDIITLETENGEQFKTIRDYVFI 234
Query: 235 IGKGTKPWVSL 245
+G KP +S+
Sbjct: 235 VGD-DKPVISM 244
>gi|170291174|ref|YP_001737990.1| 30S ribosomal protein S4e [Candidatus Korarchaeum cryptofilum OPF8]
gi|259495261|sp|B1L778.1|RS4E_KORCO RecName: Full=30S ribosomal protein S4e
gi|170175254|gb|ACB08307.1| Ribosomal protein S4E [Candidatus Korarchaeum cryptofilum OPF8]
Length = 235
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIA 63
G +HLK L AP ++ + K + KPS GPH E +PL+LI+R+ LK A T RE
Sbjct: 5 GGSRHLKSLAAPGYYPIAKRERVWVVKPSPGPHAIDEGIPLLLIVRDMLKLATTAREARR 64
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
I+ + +LVD K R D + G MDV+SIP+ N+R++ D RL I E+K
Sbjct: 65 IISMKKILVDGKPRYDYKFQVGLMDVISIPEIGVNYRMVPDPHRFLRLIEIPQSESK--- 121
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 183
KL KV + + G + ++DGR +K D++ ++L + + + ++FD
Sbjct: 122 ----MKLVKVIGKRTIRGGRIQLTSHDGRNFLLDGRDVKPGDSLLIELPSQSVIDHLRFD 177
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR--LGNVFTIGK 237
G+ V+VT GR GR+G + +G I ++D E + R N+ +GK
Sbjct: 178 TGSSVLVTRGRMAGRIG------RVEGIGTIIEMRDLENPELSYRGVKENLIVVGK 227
>gi|444721894|gb|ELW62603.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 188
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 186
++ KVR + G KGI ++ T+D TI PDPLIK N TI+ D++T K+T+ I FD G+
Sbjct: 34 HIQVYKVRQIFVGTKGILHLVTHDAPTICSPDPLIKVNTTIQTDVQTGKVTDCIVFDTGS 93
Query: 187 VVMVTGGRNRGRVGIIKNREKH-KGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
+ MVTGG + GR+G++ +RE+ F+ +H++DA + FATRL ++F IGK KPW+S
Sbjct: 94 LCMVTGGADLGRIGVLTSRERDILAFFDVVHVKDANDNSFATRLLSIFVIGKDNKPWISP 153
Query: 246 PKGKGIK 252
P +K
Sbjct: 154 PTSPWLK 160
>gi|386001173|ref|YP_005919472.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
gi|357209229|gb|AET63849.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
Length = 211
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 30 KPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDV 89
K GPH + +PL++++R+ L RE +L + VLVD K R D +P G DV
Sbjct: 3 KTRPGPHSEKGSIPLVVVVRDLLGLVDNSREAKRVLHEGGVLVDGKARKDLNFPVGIFDV 62
Query: 90 VSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTY 149
+S+P ++NFRLL D KGRF LH + EA+ KLC++ Q G +N
Sbjct: 63 ISVPALDKNFRLLTDAKGRFNLHELEAGEAR--------KLCRIEKKTVLQGGKTQLNLN 114
Query: 150 DGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHK 209
DG I + I L + +I++ I+F GN+ MV GG + G VG IK E K
Sbjct: 115 DGTNILAEGDYTTRSSVI-LSIPDKEISDVIEFKEGNLAMVVGGTHSGEVGTIKVIEVVK 173
Query: 210 GSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
S I EF T + +VF IG+ KP + L
Sbjct: 174 SSRPNRVIISG-KEEFETTVDHVFMIGR-DKPAIKL 207
>gi|325967619|ref|YP_004243811.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28]
gi|323706822|gb|ADY00309.1| 30S ribosomal protein S4E, central domain-containing protein
[Vulcanisaeta moutnovskia 768-28]
Length = 248
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 12/244 (4%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
++HL+R AP+ W + + +PS GPH + LPL +++R+ L+Y RE ++
Sbjct: 3 RRHLRRYQAPEWWPVSTKEATWVVRPSPGPHPLAKSLPLAILVRDVLRYTKNLREARYVI 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
+ VD K+R D YP G MDV+ I TNE +RL+ I EEA+
Sbjct: 63 GNGLIKVDGKIRRDYKYPVGLMDVIEIIPTNETYRLVPHPTKFLWPVPISQEEAR----- 117
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYP---DPLIKANDTIKLDLETNKITEFIKF 182
+KLC++ + + G +N +DG+ ++ P + D++ +D+ NKI + +K
Sbjct: 118 --YKLCRIENKTMVKGGQIQLNLHDGKNLQLPYEEGSKYETLDSVLIDISGNKILDHVKL 175
Query: 183 DVGNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
++G++ ++ G+N G G II+ + ++ T I + G E T + +F +GK KP
Sbjct: 176 ELGSLGLIVDGKNVGYYGKIIEIIQTYRKRGSTAKIMTSDGKEVRTIIDYLFAVGK-EKP 234
Query: 242 WVSL 245
V++
Sbjct: 235 LVTI 238
>gi|429217547|ref|YP_007175537.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
gi|429134076|gb|AFZ71088.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
Length = 252
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 16/251 (6%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIA 63
G + +K + AP W +++ + PKPS GPH + + LPL+++LR+ LKYA T +E I
Sbjct: 5 GGTRSIKGIAAPPFWPIERKLRPWTPKPSPGPHNAEQSLPLLVVLRDMLKYAETGKEAIK 64
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
I+ + + VD +V D YP MDV+ IP+ +E +R++ L+ I EEA
Sbjct: 65 IINENKIKVDGRVVNDYKYPLSVMDVLEIPENDEYYRVIPYPTDYLGLYKITKEEA---- 120
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTI-------RYPDPLIKANDTIKLDLETNKI 176
K ++ + + G +N GR I + K DT+ + L +I
Sbjct: 121 ---SLKPVRIENKTIVKGGNLQLNLSGGRNILVKFKEGEKKEVPYKTLDTLLITLPNQEI 177
Query: 177 TEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKG-SFETIHIQDALGHEFATRLGNVFTI 235
E I F +G+ +V G+N G++G I + K G T+ ++ G + T L + +
Sbjct: 178 KEHIPFQIGDYALVIWGKNVGKLGKIVSVNKQWGRKSSTVTLEGKSGRKIQTILDYILIV 237
Query: 236 GKGTKPWVSLP 246
GK KP +SLP
Sbjct: 238 GK-EKPVISLP 247
>gi|219881173|gb|ACL51789.1| putative ribosomal protein S4 [Picea abies]
gi|219881175|gb|ACL51790.1| putative ribosomal protein S4 [Picea glauca]
Length = 71
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 200 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA 259
G+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKGTKPWVSLPKGKG+KLSIIEEA
Sbjct: 1 GVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEA 60
Query: 260 RKRQ 263
RKR
Sbjct: 61 RKRH 64
>gi|298674790|ref|YP_003726540.1| 30S ribosomal protein S4e [Methanohalobium evestigatum Z-7303]
gi|298287778|gb|ADI73744.1| Ribosomal protein S4E, central domain protein [Methanohalobium
evestigatum Z-7303]
Length = 240
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KR++ P W + K + S GPH + +P+ +ILR+ L E +
Sbjct: 1 MGKHQKRISIPNSWRVAKKSNKWVTTTSPGPHHKEQSMPISVILRDMLGLVDNRSEAKRV 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VLVD K R D +P G D+++IP+ NE++RLL + K + L + + +
Sbjct: 61 LSQGKVLVDGKPRKDLKFPVGLFDIITIPEMNESYRLLINQKSKLILQKLEESDTN---- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
KLCK+ + G +N DG + + KA D+I + + I +++
Sbjct: 117 ----KLCKINDKTTVKSGAIQLNLSDGTNLIGSNDY-KAKDSIIITVPDKNIVNHLEYKE 171
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGTKPWV 243
GN+ M+ GG++ G +G IK K +GS T+ I ++F T V IG+ KP +
Sbjct: 172 GNLAMIVGGKHTGEIGTIKTITKTRGSEANTVEIS-GQNYDFETIEDYVVVIGE-DKPEI 229
Query: 244 SL 245
+L
Sbjct: 230 NL 231
>gi|448519974|ref|XP_003868191.1| hypothetical protein CORT_0B10535, partial [Candida orthopsilosis
Co 90-125]
gi|380352530|emb|CCG22756.1| hypothetical protein CORT_0B10535, partial [Candida
orthopsilosis]
Length = 78
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 61/76 (80%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HWMLDKL G +APK S GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPSHWMLDKLSGTYAPKSSPGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHVLVDAKV 76
V AILMQ+HV VD KV
Sbjct: 61 VKAILMQQHVQVDGKV 76
>gi|356499199|ref|XP_003518429.1| PREDICTED: uncharacterized protein LOC100789816 [Glycine max]
Length = 297
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/57 (96%), Positives = 55/57 (96%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTY 58
ARGLKKHLKRLNA KHWMLDKLGGAFAPKPSSG HKSRECLPLILILRNRLKYALTY
Sbjct: 151 ARGLKKHLKRLNARKHWMLDKLGGAFAPKPSSGSHKSRECLPLILILRNRLKYALTY 207
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
A GLKKHLKRLNAPKHWMLDKLGGAFA +EC IL R+ +A + E+
Sbjct: 16 ATGLKKHLKRLNAPKHWMLDKLGGAFASV------NQKECTD-ILTAYPRIMHANNFFEL 68
Query: 62 IAILMQ 67
++Q
Sbjct: 69 AEAILQ 74
>gi|413936106|gb|AFW70657.1| putative protein disulfide isomerase family protein isoform 1 [Zea
mays]
gi|413936107|gb|AFW70658.1| putative protein disulfide isomerase family protein isoform 2 [Zea
mays]
Length = 84
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 59/63 (93%)
Query: 155 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 214
RYPDPLIKA DTIK+DLETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKG FET
Sbjct: 14 RYPDPLIKAIDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGIFET 73
Query: 215 IHI 217
IH+
Sbjct: 74 IHM 76
>gi|410670339|ref|YP_006922710.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
gi|409169467|gb|AFV23342.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
Length = 236
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KR++ P W + K + GPH ++ +PL ++LR+ L E +
Sbjct: 1 MGKHQKRISVPNSWQISKKSNKWITATRPGPHNKQQSIPLAVVLRDMLCVVDNRAEAKRV 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + VLVD +R D +P G +DV+S+P N +R+L D KGR LH I++
Sbjct: 61 LSEGKVLVDGVIRKDLRFPVGLLDVISMPVENVAYRVLLDGKGRLELHKIKESTDN---- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
KLC++ + G+ +N DG I + D+I L L K+ + IK+
Sbjct: 117 ----KLCRINGKTVLKGGVIQLNLNDGSNIIGSNDY-NTKDSIILSLPDKKVVQHIKYQA 171
Query: 185 GNVVMVTGGRNRGRVGIIK 203
GN+ ++ GG++ G +G IK
Sbjct: 172 GNLALIVGGKHTGSIGTIK 190
>gi|395644928|ref|ZP_10432788.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
gi|395441668|gb|EJG06425.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
Length = 240
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 117/239 (48%), Gaps = 13/239 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ HLKRL AP W + K F K S GPH S +P+ + LR+++ A +EV I
Sbjct: 1 MSYHLKRLTAPVSWHIAKKEEKFVTKTSPGPH-SGAAMPVAVWLRDKMGLAGNMKEVKRI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L QR V+++ K TD G D++SIPK +++R+L D KGR I E AK
Sbjct: 60 LNQRQVILNGKPVTDPKLGLGIFDIISIPKIGKHYRVLTDKKGRMVTIEIDAEAAKT--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK---ITEFIK 181
+LCK+R+ + G +N G + D D+I + LE I +
Sbjct: 117 ----RLCKIRNKSIVRGGKVQLNLLYGANL-LADNTYHPKDSIVVTLEGENRFAIVDHFP 171
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGT 239
F +GN+ MV GG++ G+VG I GS + +QD G F T VF IG+ T
Sbjct: 172 FAIGNMAMVIGGKHSGKVGRISEIRVAAGSIPNRVILQDKDGETFETVEQYVFMIGRET 230
>gi|379994271|gb|AFD22762.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 84
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
M RG +KHLKRLNAP WMLDKL G FAP+PS GPHK RE LPL+++LRNRLKYALT RE
Sbjct: 1 MVRGPRKHLKRLNAPSSWMLDKLSGTFAPRPSPGPHKLRESLPLVVLLRNRLKYALTRRE 60
Query: 61 VIAILMQRHVLVDAKVRTD 79
VI I+ QR + VD K RT+
Sbjct: 61 VIQIVKQRLLKVDGKARTE 79
>gi|383319766|ref|YP_005380607.1| 30S ribosomal protein S4 [Methanocella conradii HZ254]
gi|379321136|gb|AFD00089.1| SSU ribosomal protein S4E [Methanocella conradii HZ254]
Length = 236
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 10/199 (5%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
K HLKR+ AP+ W + K + KPS GPH +PLI++LR+ L A +E+ IL
Sbjct: 4 KHHLKRVAAPRSWPIAKKTSKWVAKPSPGPHSEEYGMPLIIVLRDMLHLADKAKEIRQIL 63
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
+ VLVD KVR D +P G DV+SIP+ N N+R++ G+F+L I D
Sbjct: 64 HEGKVLVDGKVRKDHRFPVGLFDVISIPELNANYRVMIGQDGKFKLVPIADA-------- 115
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
KL K+ + G + +DG T+ + D++ L + I + +K++VG
Sbjct: 116 -GMKLLKIVNKTMVPGGKIQLGFHDGTTMLASNDY-HTKDSLVLKVPEKSIDQHLKYEVG 173
Query: 186 NVVMVTGGRNRGRVGIIKN 204
++ V G++ G +G IK+
Sbjct: 174 SMAFVIDGKHAGTLGKIKD 192
>gi|444707815|gb|ELW48989.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 239
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 82/126 (65%), Gaps = 7/126 (5%)
Query: 29 PKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 88
P+ S+G + + L + ++R KYALT V + QR + +D KVRTD YPAGFMD
Sbjct: 25 PRWSAGAYAGGQREELWAMDKHRFKYALTGDGVKKVCTQRFIEIDGKVRTDIPYPAGFMD 84
Query: 89 VVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINT 148
V+SI K+ ENFRL+YDTKGRF +H I EEAK +KL KVR + G KGIP++ T
Sbjct: 85 VISIDKSGENFRLIYDTKGRFAVHRITPEEAK-------YKLRKVRKIFEGTKGIPHLVT 137
Query: 149 YDGRTI 154
+D RT+
Sbjct: 138 HDARTM 143
>gi|20089954|ref|NP_616029.1| 30S ribosomal protein S4 [Methanosarcina acetivorans C2A]
gi|22096115|sp|Q8TRT5.1|RS4E_METAC RecName: Full=30S ribosomal protein S4e
gi|19914915|gb|AAM04509.1| ribosomal protein S4e [Methanosarcina acetivorans C2A]
Length = 235
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 116/239 (48%), Gaps = 13/239 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KRL+ PK W + K G + GPH LPL +I+R+ LK RE IL +
Sbjct: 3 HQKRLSVPKSWKVGKKGNKWISTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSE 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD R D +P G DV+++P NE +R+L D KGR LH + +
Sbjct: 63 GKVLVDGIPRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLTLHKLNETNVN------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
KLC++ + + G +N DG I + D++ L + ++ + +KF+VGN+
Sbjct: 116 -KLCRINNKTTVKGGKFQLNLNDGTNIIGSNEY-GTKDSLILSIPDKQVVKHLKFEVGNL 173
Query: 188 VMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
MV GG++ G G I++ RE T+ I +F T V IG+ KP + L
Sbjct: 174 AMVVGGQHSGETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|218117277|emb|CAQ37766.1| 40S ribosomal protein S4 [Echinorhynchus truttae]
Length = 83
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 133 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 192
V VQ G KG+P+++T+DGRTIRYPDP IK +DTIK+++ET KI +FIKF+VGN+ M+TG
Sbjct: 1 VNHVQTGPKGVPFLSTHDGRTIRYPDPHIKVHDTIKINVETGKIEDFIKFEVGNICMITG 60
Query: 193 GRNRGRVGIIKNREKHKGSFETI 215
G N GR+G + +REKH GSFE I
Sbjct: 61 GNNLGRIGALISREKHPGSFEII 83
>gi|327400860|ref|YP_004341699.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
gi|327316368|gb|AEA46984.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
Length = 231
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 12/239 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KRL+APK + + + K + GPH ++ +PL++I+R+ L A T RE ++
Sbjct: 2 HQKRLSAPKTIKVPRKIKKWLVKTAPGPH-NKNAVPLLVIVRDFLGLADTAREARRVIAA 60
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+LVD + R D +P G DV+SIPK +++R+L+D KGR+ I D+ +
Sbjct: 61 GEILVDGRPRKDYKFPVGLFDVISIPKLGKSYRILFDDKGRYIPKEIGDD---------K 111
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
KL K+ + + G +N +DG I D K D++ L+L KI + +KF+ G +
Sbjct: 112 LKLYKIVNKTIVKGGKVQLNLFDGTNI-LADNTYKTKDSVLLELPEKKIVDHLKFEEGAL 170
Query: 188 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK-GTKPWVSL 245
VM+ GG + G +G IK + +GS + ++ T +VF +GK KP + L
Sbjct: 171 VMIVGGTHAGEIGRIKEYKVVRGSAPNLVTIESEKGVITTIEDHVFVVGKPDGKPVIDL 229
>gi|330508486|ref|YP_004384914.1| 30S ribosomal protein S4E [Methanosaeta concilii GP6]
gi|328929294|gb|AEB69096.1| ribosomal protein S4E [Methanosaeta concilii GP6]
Length = 234
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 10/232 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL P W + + + PK S GPH S+E +PL++++R+ LK RE +
Sbjct: 1 MSRHQKRLTIPVSWPVARKTSVWVPKSSPGPHSSQESMPLLMVIRDMLKLVDNAREAKRV 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + VLVD K + D P G DV+ +P ++ +R+L D KG F L + A+
Sbjct: 61 LYEGKVLVDGKSQKDHKLPIGIFDVIGLPLLDQQYRMLKDEKGMFYLSLLEPGSAR---- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
KL ++ + + +N DG + + K D++ L + I E I+F V
Sbjct: 117 ----KLARIENKTVLRGNKQQLNLSDGSN-KLAEGDYKVGDSLVLSIPEKDIDERIEFKV 171
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 236
GN+ MV GG++ G+ G IK+ K K S I EF T V+ IG
Sbjct: 172 GNLAMVVGGKHSGQTGKIKDIIKVKSSQPNRVIISG-DKEFETIEEYVYMIG 222
>gi|215809334|gb|ACJ70374.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809336|gb|ACJ70375.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809338|gb|ACJ70376.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809340|gb|ACJ70377.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809342|gb|ACJ70378.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809344|gb|ACJ70379.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809346|gb|ACJ70380.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809348|gb|ACJ70381.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809350|gb|ACJ70382.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809352|gb|ACJ70383.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809354|gb|ACJ70384.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809356|gb|ACJ70385.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809358|gb|ACJ70386.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809360|gb|ACJ70387.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809362|gb|ACJ70388.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809364|gb|ACJ70389.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809366|gb|ACJ70390.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809368|gb|ACJ70391.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809370|gb|ACJ70392.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809372|gb|ACJ70393.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809374|gb|ACJ70394.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809376|gb|ACJ70395.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809378|gb|ACJ70396.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809380|gb|ACJ70397.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809382|gb|ACJ70398.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809384|gb|ACJ70399.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809386|gb|ACJ70400.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809388|gb|ACJ70401.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809390|gb|ACJ70402.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809392|gb|ACJ70403.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809394|gb|ACJ70404.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809396|gb|ACJ70405.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809398|gb|ACJ70406.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809400|gb|ACJ70407.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809402|gb|ACJ70408.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809404|gb|ACJ70409.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809406|gb|ACJ70410.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809408|gb|ACJ70411.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809410|gb|ACJ70412.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809412|gb|ACJ70413.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|219881163|gb|ACL51784.1| putative ribosomal protein S4 [Pinus contorta]
gi|219881165|gb|ACL51785.1| putative ribosomal protein S4 [Pinus nigra]
gi|219881167|gb|ACL51786.1| putative ribosomal protein S4 [Pinus pinaster]
gi|219881169|gb|ACL51787.1| putative ribosomal protein S4 [Pinus ponderosa]
gi|219881171|gb|ACL51788.1| putative ribosomal protein S4 [Pinus resinosa]
Length = 71
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 200 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA 259
G IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKGTKPWVSLPKGKG+KLSII+EA
Sbjct: 1 GTIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIDEA 60
Query: 260 RKR 262
RKR
Sbjct: 61 RKR 63
>gi|396468646|ref|XP_003838224.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214791|emb|CBX94745.1| predicted protein [Leptosphaeria maculans JN3]
Length = 83
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 64/80 (80%)
Query: 153 TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSF 212
+IRYPDP IK NDT+K+DL T KI++FIKFD G +VMVTGGRN GRVG+I +RE+H G F
Sbjct: 3 SIRYPDPAIKVNDTVKIDLSTGKISDFIKFDTGVLVMVTGGRNMGRVGVITHRERHDGGF 62
Query: 213 ETIHIQDALGHEFATRLGNV 232
+H++DA+ +EF TR NV
Sbjct: 63 NIVHLKDAVDNEFTTRETNV 82
>gi|344247051|gb|EGW03155.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 176
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 ECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENF 99
+CLPL + LRNRL+ A+ + + I Q + VD KV TD YPAGF + ++I K+++N
Sbjct: 36 QCLPLDVFLRNRLRCAV-MEDKMKISKQCVIKVDGKVTTDVAYPAGFTNAITINKSSKNL 94
Query: 100 RLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP 159
L+ DTKG F +H I +EAK KLC++R V G KGI + +D T+ YP+P
Sbjct: 95 CLVCDTKGHFIMHHITSKEAKN-------KLCRMRMVFVGTKGILNVMIHDKHTVHYPNP 147
Query: 160 LIKANDTIKLDLETNKITEFIKFDVGN 186
LIK N T+ L+T+ I E KF+ N
Sbjct: 148 LIKVNGTVLDLLDTDNIIEVFKFNTDN 174
>gi|21228238|ref|NP_634160.1| 30S ribosomal protein S4 [Methanosarcina mazei Go1]
gi|452210673|ref|YP_007490787.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
gi|23822141|sp|Q8PV38.1|RS4E_METMA RecName: Full=30S ribosomal protein S4e
gi|20906694|gb|AAM31832.1| SSU ribosomal protein S4E [Methanosarcina mazei Go1]
gi|452100575|gb|AGF97515.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
Length = 235
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 115/239 (48%), Gaps = 13/239 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KRL+ PK W + + G + GPH LPL LI+R+ LK RE IL +
Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD R D +P G DV+++P NE +R+L D KGR L+ + +
Sbjct: 63 GKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLNETNVN------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
KLC++ + + G +N DG I + D++ L + + + +KF+VGN+
Sbjct: 116 -KLCRINNKTTVKGGKIQLNLNDGTNILGSNDY-GTKDSLILSIPDKHVVKHLKFEVGNL 173
Query: 188 VMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
MV GG++ G G I++ RE T+ I +F T V IG+ KP + L
Sbjct: 174 AMVIGGQHSGETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|432331999|ref|YP_007250142.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
gi|432138708|gb|AGB03635.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
Length = 241
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 120/238 (50%), Gaps = 14/238 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ HLKRLNAP+ W + K F K + GPH + +P+ + LR+ +K A +EV I
Sbjct: 1 MSDHLKRLNAPESWHIAKKANKFITKTAPGPHNA-NAMPIAVWLRDHMKLARNMKEVKQI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q+ V+V+ + D G D++++PK N+ +R+L D GR I E AK
Sbjct: 60 LGQKDVIVNGRPCRDPKMGIGIFDIIALPKINKYYRILRDRDGRHVSVEIDAEAAKT--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN---KITEFIK 181
+LCKV++ G +N DG I D K+ D++ + LE KI +
Sbjct: 117 ----RLCKVKNKTTIAGGKVQLNLRDGANI-LADNTYKSGDSVVVSLEPENRFKIVDHFP 171
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDA-LGHEFATRLGNVFTIGK 237
F VGN+ M+ GG++ G V I + K GS I +QD G +F T ++ +GK
Sbjct: 172 FVVGNMAMIIGGKHSGNVARIVDIVKMPGSVPNKIILQDEKTGTKFDTIAPYIYMVGK 229
>gi|396468642|ref|XP_003838223.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214790|emb|CBX94744.1| predicted protein [Leptosphaeria maculans JN3]
Length = 81
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 7/88 (7%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQR V VD KVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H I DEEA
Sbjct: 1 MQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEA------ 54
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRT 153
Q+KL KV+ VQ G+ GIPY+ T+D RT
Sbjct: 55 -QYKLGKVKRVQLGKGGIPYLVTHDART 81
>gi|413936658|gb|AFW71209.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 150
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 58/70 (82%)
Query: 113 SIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE 172
+++ L L QFKLCKVR VQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE
Sbjct: 59 QLQENLCGLLYLARQFKLCKVRFVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLE 118
Query: 173 TNKITEFIKF 182
TNKI +FIK
Sbjct: 119 TNKIMDFIKL 128
>gi|73667650|ref|YP_303665.1| 30S ribosomal protein S4 [Methanosarcina barkeri str. Fusaro]
gi|121725704|sp|Q46GA7.1|RS4E_METBF RecName: Full=30S ribosomal protein S4e
gi|72394812|gb|AAZ69085.1| SSU ribosomal protein S4E [Methanosarcina barkeri str. Fusaro]
Length = 235
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 112/239 (46%), Gaps = 13/239 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KRL+ P+ W K G + GPH LPL +I+R+ LK RE IL +
Sbjct: 3 HQKRLSIPRSWKAGKKGYKWVSTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSE 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD R D +P G DV+++P NE +R+ D KGR LH +
Sbjct: 63 GKVLVDGIPRKDLRFPVGLFDVITLPLVNETYRMFQDEKGRLALHKLNATNVN------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 187
KLC++ + + G +N DG I + D++ L L +I + ++F VGN+
Sbjct: 116 -KLCRINNKTTLKGGKVQLNLNDGTNILGSNEY-STKDSLILSLPDKQIVKHLQFKVGNL 173
Query: 188 VMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 245
MV GG++ G +G I + RE T+ I +F T V IG+ KP + L
Sbjct: 174 AMVVGGQHSGEIGKITEIREVKSSRHNTVAISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|305662603|ref|YP_003858891.1| 30S ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
gi|304377172|gb|ADM27011.1| SSU ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
Length = 252
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 127/259 (49%), Gaps = 23/259 (8%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G +HLKRL AP W + + + KPS GPH +PL++++R+ L A T R
Sbjct: 1 MARMGGSRHLKRLAAPLFWPILRKEYKWVVKPSPGPHPVSRSIPLLILVRDVLNIAKTSR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLL-YDTKGRFRLHSIRDEE 118
E I+ + VD R D +P G MD +SIP+ + R++ Y TK + ++ ++E
Sbjct: 61 EAKRIIFDGKIYVDGVQRRDYKFPIGPMDSISIPEIDMYLRMVPYPTKYLWYINISKEEA 120
Query: 119 AKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPL-------IKANDTIKL 169
L+ + K +Q G T+DGR IR DP K DT+ +
Sbjct: 121 CLKLVRIENKLTVKNGHIQLG--------THDGRNILIRVKDPRNPVEAMNYKTLDTLLI 172
Query: 170 DLETNKITEFIKFDVGNVVMVTGGRNRGRVG---IIKNREKHKGSFETIHIQDALGHEFA 226
++ + +I + I D+G +V GRN GR+G I+ RE K + ++D GH F
Sbjct: 173 EVPSQRIIQHIPLDIGKYAIVIHGRNVGRLGKILSIEVREGMKRRRALVTMEDINGHRFQ 232
Query: 227 TRLGNVFTIGKGTKPWVSL 245
T L V +G KP + L
Sbjct: 233 TILDYVMVVGD-EKPVIKL 250
>gi|15897612|ref|NP_342217.1| 30S ribosomal protein S4 [Sulfolobus solfataricus P2]
gi|284174936|ref|ZP_06388905.1| 30S ribosomal protein S4e [Sulfolobus solfataricus 98/2]
gi|384434225|ref|YP_005643583.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
solfataricus 98/2]
gi|11134765|sp|Q9UX94.1|RS4E_SULSO RecName: Full=30S ribosomal protein S4e
gi|6015771|emb|CAB57598.1| ribosomal protein S4E [Sulfolobus solfataricus P2]
gi|13813875|gb|AAK41007.1| SSU ribosomal protein S4E (rps4E) [Sulfolobus solfataricus P2]
gi|261602379|gb|ACX91982.1| Ribosomal protein S4E, central domain protein [Sulfolobus
solfataricus 98/2]
Length = 239
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H+ R AP M+ K + +P++GPH + +PL +++R+ LK A T RE I+
Sbjct: 3 HITRFEAPWFLMISKKQYKWTVRPNAGPHSIEKSIPLAVVIRDYLKLAGTIREAKHIIFD 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD KVR D YP G MD+VSIP + FR+L D R I +EA+
Sbjct: 63 GKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVLPDNVRFMRFSKISADEAR------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFDV 184
+K ++ + ++G +N DGR I K T+K++L + +I +
Sbjct: 116 YKYVRIINKTTIKEGRIQLNLEDGRNILVDKETAKNFKTLMTLKIELPSQQILDSFTISE 175
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHK---GSFETIHIQDALGHEFATRLGNVFTIGK 237
+ + GGRN G GI+KN K + I ++ G+ + T + NV +IG+
Sbjct: 176 RSYAIFVGGRNVGIHGIVKNINLSKFKSRKYSVITLESRDGNTYQTNIMNVMSIGR 231
>gi|444706232|gb|ELW47581.1| EF-hand domain-containing family member A1 [Tupaia chinensis]
Length = 426
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 62/79 (78%)
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 186
Q+KLCKVR + G KGIP++ T+D RTI Y DPLIK NDTI++D+E K ++FIKFD GN
Sbjct: 348 QYKLCKVRKIFVGIKGIPHLVTHDARTISYLDPLIKVNDTIQIDMEIGKSSDFIKFDTGN 407
Query: 187 VVMVTGGRNRGRVGIIKNR 205
+ MVTGG N GR+G+I NR
Sbjct: 408 LCMVTGGANLGRIGVITNR 426
>gi|413932716|gb|AFW67267.1| putative threonine aldolase family protein [Zea mays]
Length = 467
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
L +FKLCKVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 388 LCEFKLCKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 445
>gi|227827703|ref|YP_002829483.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.14.25]
gi|227830399|ref|YP_002832179.1| 30S ribosomal protein S4e [Sulfolobus islandicus L.S.2.15]
gi|229579218|ref|YP_002837616.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.G.57.14]
gi|229582030|ref|YP_002840429.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.N.15.51]
gi|229584907|ref|YP_002843409.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.27]
gi|238619874|ref|YP_002914700.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.4]
gi|284997906|ref|YP_003419673.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
gi|385773375|ref|YP_005645941.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
islandicus HVE10/4]
gi|385776013|ref|YP_005648581.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
islandicus REY15A]
gi|259495262|sp|C3N5T9.1|RS4E_SULIA RecName: Full=30S ribosomal protein S4e
gi|259495263|sp|C4KHG8.1|RS4E_SULIK RecName: Full=30S ribosomal protein S4e
gi|259495264|sp|C3MQ71.1|RS4E_SULIL RecName: Full=30S ribosomal protein S4e
gi|259495265|sp|C3MVJ0.1|RS4E_SULIM RecName: Full=30S ribosomal protein S4e
gi|259495266|sp|C3NH97.1|RS4E_SULIN RecName: Full=30S ribosomal protein S4e
gi|259495267|sp|C3NEF5.1|RS4E_SULIY RecName: Full=30S ribosomal protein S4e
gi|227456847|gb|ACP35534.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus L.S.2.15]
gi|227459499|gb|ACP38185.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.14.25]
gi|228009932|gb|ACP45694.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus Y.G.57.14]
gi|228012746|gb|ACP48507.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus Y.N.15.51]
gi|228019957|gb|ACP55364.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.16.27]
gi|238380944|gb|ACR42032.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.16.4]
gi|284445801|gb|ADB87303.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
gi|323474761|gb|ADX85367.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus REY15A]
gi|323477489|gb|ADX82727.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus HVE10/4]
Length = 239
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H+ R P ++ K + +P++GPH + +PL +++R+ LK A T RE I+
Sbjct: 3 HITRFETPWFLVISKKQYKWTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFD 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD KVR D YP G MD+VSIP + FR++ D RL I +EA
Sbjct: 63 GKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEA-------H 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND---TIKLDLETNKITEFIKFDV 184
+K ++ + + G +N DGR I K+ T+K++L + I +
Sbjct: 116 YKYVRIMNKTTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISE 175
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHK---GSFETIHIQDALGHEFATRLGNVFTIGK 237
G+ + GG+N G G++KN K + I ++ G+ + T L NV +IG+
Sbjct: 176 GSYAIFVGGKNVGIHGVVKNINLSKFKSRKYSVITLESKDGNTYQTNLMNVMSIGR 231
>gi|414875901|tpg|DAA53032.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 215
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 55/60 (91%)
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 181
L++ FKLCKVRSVQFGQKGIPY+NTYDGRTI YPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 133 LLVCVPFKLCKVRSVQFGQKGIPYLNTYDGRTIHYPDPLIKANDTIKIDLETNKIMDFIK 192
>gi|403214615|emb|CCK69116.1| hypothetical protein KNAG_0B06920 [Kazachstania naganishii CBS
8797]
Length = 74
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 59/70 (84%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL RE
Sbjct: 1 MARGPKKHLKRLAAPNHWLLDKLTGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE 60
Query: 61 VIAILMQRHV 70
V AILM+RHV
Sbjct: 61 VKAILMERHV 70
>gi|119621546|gb|EAX01141.1| hCG1643126, isoform CRA_b [Homo sapiens]
Length = 128
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 89/162 (54%), Gaps = 34/162 (20%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
MQ+ + +D KV TD TY G +DV SI KT ENF L+ DT+ + K+LI
Sbjct: 1 MQQFIKIDDKVLTDITYATGSLDV-SINKTRENFHLICDTRA----------QKKSLI-- 47
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
+Q + + LIK ND ++ DLET KIT+FI+F+ G
Sbjct: 48 WQLMMLAPSAAL---------------------ALIKVNDIVQTDLETGKITDFIRFNTG 86
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 227
N+ MVTGG N GR+G I NREKH G F+ +H++DA + FAT
Sbjct: 87 NLCMVTGGANLGRIGAITNREKHPGFFDVVHVKDANSNSFAT 128
>gi|159042387|ref|YP_001541639.1| 30S ribosomal protein S4e [Caldivirga maquilingensis IC-167]
gi|189045348|sp|A8MB20.1|RS4E_CALMQ RecName: Full=30S ribosomal protein S4e
gi|157921222|gb|ABW02649.1| Ribosomal protein S4E, central [Caldivirga maquilingensis IC-167]
Length = 237
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 10/233 (4%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
HL+R +P+ W +++ G ++ KPS GPH + +PL ++LR+ YA T RE I+ +
Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+V VD KVR D YP G MDV+ + NE +R++ D R IR ++++A +
Sbjct: 63 GYVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLR--PIRIDKSEAGV---- 116
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDT---IKLDLETNKITEFIKFDV 184
K+C++ + G +N +DGR I + +T + ++LE K+ ++
Sbjct: 117 -KVCRIEDKTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQP 175
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
V+ G N GR G + N + + I A EF T L + IGK
Sbjct: 176 NQYVIAFNGVNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGK 228
>gi|413941845|gb|AFW74494.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 173
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 143 IPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGII 202
IPY+NTYDGRTIR PD LIKANDT K+DLETNKI +F KFDVGNVVMV GGRN GRVG+I
Sbjct: 112 IPYLNTYDGRTIRNPDQLIKANDTTKIDLETNKIMDFFKFDVGNVVMVIGGRNIGRVGVI 171
Query: 203 KN 204
KN
Sbjct: 172 KN 173
>gi|91772095|ref|YP_564787.1| 30S ribosomal protein S4e [Methanococcoides burtonii DSM 6242]
gi|91711110|gb|ABE51037.1| SSU ribosomal protein S4E [Methanococcoides burtonii DSM 6242]
Length = 236
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 115/240 (47%), Gaps = 13/240 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KR++ PK W + K + GPH + +PL +ILR+ L E +
Sbjct: 1 MATHQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRV 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +VLVD R D +P G MD+++IP N +R++ D K R L+ + A
Sbjct: 61 LSEGNVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD---- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
KLC++ ++G + DG I + D+I L + K+ + IK++V
Sbjct: 117 ----KLCRIEGKTSIKEGKIQMRLNDGVNIIGSNNY-NTKDSIILSVPDKKVVKHIKYEV 171
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGTKPWV 243
GN+ M+ GG + G VG IK K S T+ I + EF T VF IG+ +KP +
Sbjct: 172 GNLAMIVGGSHAGEVGSIKEINTVKSSKNNTVTISGEI--EFETIEDYVFVIGE-SKPEI 228
>gi|388516491|gb|AFK46307.1| unknown [Lotus japonicus]
Length = 98
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 138 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRG 197
G K +PYI T+D RTIRYPDP IKANDTI+LD+ T KI E IKFD GN+VM+TGG N G
Sbjct: 1 MGPKKVPYIITHDARTIRYPDPHIKANDTIQLDIATGKIQEHIKFDTGNIVMITGGHNLG 60
Query: 198 RVGIIKNREKHKGSF 212
RVG+I++RE+H G
Sbjct: 61 RVGVIQSRERHPGHL 75
>gi|336477149|ref|YP_004616290.1| 30S ribosomal protein S4 [Methanosalsum zhilinae DSM 4017]
gi|335930530|gb|AEH61071.1| Ribosomal protein S4E, central domain protein [Methanosalsum
zhilinae DSM 4017]
Length = 236
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KR++ PK W + K +A GPH + +P+ ++LR+ L+ E +
Sbjct: 1 MGKHQKRISVPKSWQIPKKANKWALSTRPGPHHKAQSVPIGIVLRDMLELVDNSSEAKKV 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L +LVD VR D +P G D+++IP N ++ +L D KGR L+ ++D
Sbjct: 61 LSDGKILVDGTVRKDVRFPIGLFDIITIPLNNLSYIVLLDRKGRLVLNQLQD-------- 112
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+ KLCK+ + G +N DG I K ND++ + L +I + I++
Sbjct: 113 ITTTKLCKINGKTTVKGGKVQLNLSDGTNIIATSEY-KPNDSVIISLPDKEIVKHIEYKE 171
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS 211
GN+ M+ GG + G +G I++ K + S
Sbjct: 172 GNLAMIVGGTHSGELGTIRSINKVRSS 198
>gi|342906010|gb|AEL79288.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 73
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 58/73 (79%)
Query: 29 PKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMD 88
P PS+GPHK RECLPL++ LRNRLKYALT EV I+MQR + VD KVRTD YPAGFMD
Sbjct: 1 PAPSTGPHKLRECLPLVIFLRNRLKYALTNVEVTKIVMQRLIKVDGKVRTDPNYPAGFMD 60
Query: 89 VVSIPKTNENFRL 101
V++I KT E FRL
Sbjct: 61 VITIEKTGEFFRL 73
>gi|413917030|gb|AFW56962.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 142
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 53/60 (88%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
A KP GPHKSRECLPLILI+RN LKYAL YREVI+ILMQRHVLVD KV TDKTYPAGFM
Sbjct: 56 ALKPYFGPHKSRECLPLILIIRNMLKYALAYREVISILMQRHVLVDGKVWTDKTYPAGFM 115
>gi|170516825|gb|ACB15227.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 231
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 16/234 (6%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
+ H+KRL P+ W L + + KP++G H C+PL L+LR+ L A T RE IL
Sbjct: 3 RSHIKRLVMPRSWPLPRKSSIWVQKPNAGGHSIENCMPLALVLRDVLGVAHTRREAKHIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
R V+VD ++ TD G MDV+S+ + +NFR + DT G+ R I A +
Sbjct: 63 HSRQVMVDGRIETDDGRGVGLMDVLSVGE--KNFRCVLDTNGKLRYRPIPKNAAGS---- 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLETNKITEFIKFDV 184
K+C+V + ++ +DGR + D K+ D++ + L +IT + F
Sbjct: 117 ---KICRVTGKTTIRGAKTQLHLHDGRNLLMDDASAYKSGDSVIISLPEQQITSHLPFTE 173
Query: 185 GNVVMVTGGRNRGRVGIIKNRE-KHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
G +TGG + G + ++ + K + D F T VF IG
Sbjct: 174 GAQSYMTGGSHTGEIATVRGHDVKRSSKANEVQFDD-----FLTIADYVFVIGS 222
>gi|390363321|ref|XP_788494.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
purpuratus]
Length = 79
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 60/76 (78%)
Query: 189 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 248
M+TGGRN GRVG I +REKH GSFE +HI+DA H +ATRLGNVF IGK K +VSLPKG
Sbjct: 1 MITGGRNLGRVGTITHREKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKAYVSLPKG 60
Query: 249 KGIKLSIIEEARKRQA 264
KGI+L+I EE KR A
Sbjct: 61 KGIRLTIAEEREKRIA 76
>gi|413917031|gb|AFW56963.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 135
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 53/60 (88%)
Query: 28 APKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 87
A KP GPHKSRECLPLILI+RN LKYAL YREVI+ILMQRHVLVD KV TDKTYPAGFM
Sbjct: 56 ALKPYFGPHKSRECLPLILIIRNMLKYALAYREVISILMQRHVLVDGKVWTDKTYPAGFM 115
>gi|355571371|ref|ZP_09042623.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
NOBI-1]
gi|354825759|gb|EHF09981.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
NOBI-1]
Length = 241
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 14/238 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ HLKRLNAP W + K F K S GPH + +P+ + LR+ + A+ +EV I
Sbjct: 1 MGDHLKRLNAPDSWHVAKKTSKFIAKTSPGPHNA-NAMPVAVWLRDHMHLAVNAKEVRQI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q+ V+++ + + G D++SIP+ +FR+L D KGR + I E AK+
Sbjct: 60 LQQKEVIINGRPCRNPRMGIGIFDIISIPRIGRHFRILRDKKGRHKTIEIDAEAAKS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK---ITEFIK 181
+L K+R+ G +N G + D D+I L LE I +
Sbjct: 117 ----RLAKIRNKTIVPGGKVQLNLRFGANV-IADNRYHPGDSIVLSLEPENRFAILDHFP 171
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQD-ALGHEFATRLGNVFTIGK 237
F VGN+ MV GGR+ G+V I EK GS + ++D A G F T ++ +G+
Sbjct: 172 FAVGNMAMVIGGRHSGKVARIVGIEKVPGSVPNRVILEDPADGSRFETIDEYIYMVGR 229
>gi|307354335|ref|YP_003895386.1| 30S ribosomal protein S4E [Methanoplanus petrolearius DSM 11571]
gi|307157568|gb|ADN36948.1| Ribosomal protein S4E, central domain protein [Methanoplanus
petrolearius DSM 11571]
Length = 242
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 14/244 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H+KRL +P W + K F K + GPH +R +P+ + LR+ + AL +EV I
Sbjct: 1 MSNHMKRLTSPTGWRIAKKENKFVIKTAPGPH-NRNSMPMAVWLRDHMGLALNMKEVKKI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L +R V+++ TD G D++SIPK ++ +R+L D KG + I ++AK
Sbjct: 60 LKERSVILNGVPCTDSKLGIGVFDIISIPKVDKYYRILRDKKGDYVSIPISADDAKT--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN---KITEFIK 181
+LCKV + + G +N G + K D+I + LE + K+T+
Sbjct: 117 ----RLCKVENKTIVKGGKIQLNLRYGANLIVDSQDYKPKDSIVIGLEGDNRFKVTDHYP 172
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDA-LGHEFATRLGNVFTIGKGT 239
F G+V M+ GG + G++G I + GS ++++D G +F T +F IG T
Sbjct: 173 FAEGSVAMIIGGSHSGKIGRISKIDTIPGSISNRVYLKDEKSGEDFDTIEEYIFVIGT-T 231
Query: 240 KPWV 243
+P V
Sbjct: 232 EPAV 235
>gi|413943660|gb|AFW76309.1| putative ribosomal protein S4 (RPS4A) family protein, partial [Zea
mays]
Length = 414
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 53/58 (91%)
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
L +FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 103 LQEFKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKIMDFIKL 160
>gi|413943661|gb|AFW76310.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 182
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 53/58 (91%)
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
L +FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 103 LQEFKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKIMDFIKL 160
>gi|315427720|dbj|BAJ49316.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
Length = 238
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
HLK L AP+H+ K F PS GPH ++ +PL++ +R+ L YA ++ Q
Sbjct: 3 HLKTLAAPRHY--PKRATVFTVAPSPGPHAKKKSIPLLIAVRDLLNYADNAHTARRLIKQ 60
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+VD +V D +P G MDV+SIP+ EN+R+L L EEA
Sbjct: 61 GKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGKGLTLAKTSSEEA-------G 113
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL------IKANDTIKLDLETNKITEFIK 181
FK+C+V + G I +DGRTI + + IK DT+K+ + + +I E I
Sbjct: 114 FKICQVVRKNHVRGGALMIGLHDGRTILFRGEMLDKGRAIKTLDTLKIAVPSQEILETIS 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIK--NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
D G + G G G I RE T ++ G T L N+ +G G
Sbjct: 174 LDNGVYAYIHSGARAGLHGKIMRIRREVVFPDKPTATVETGQG-TVTTLLRNLMPVG-GE 231
Query: 240 KPWVSL 245
PW++L
Sbjct: 232 APWITL 237
>gi|414872252|tpg|DAA50809.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 255
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 81/152 (53%), Gaps = 56/152 (36%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
+QRHVLVD K+ +P S+ +T TK RLH IRDE+AK
Sbjct: 152 LQRHVLVDGKM----PFP-------SLRQTG--------TKRCLRLHPIRDEDAK----- 187
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 185
FKLCK ANDTIK+DLETNKI +F KFDVG
Sbjct: 188 --FKLCK------------------------------ANDTIKIDLETNKIMDFFKFDVG 215
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
NVVMVTGGRN GRVG IKN EKHKGSFE I +
Sbjct: 216 NVVMVTGGRNIGRVGEIKNWEKHKGSFEVIDV 247
>gi|315425862|dbj|BAJ47515.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
gi|343484677|dbj|BAJ50331.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
Length = 238
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
HLK L AP+H+ K F PS GPH ++ +PL++ +R+ L YA ++ Q
Sbjct: 3 HLKTLAAPRHY--PKKATVFTVAPSPGPHAKKKSIPLLIAVRDLLNYADNAHTARRLIKQ 60
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+VD +V D +P G MDV+SIP+ EN+R+L L EEA
Sbjct: 61 GKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGKGLTLAKTSSEEA-------G 113
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL------IKANDTIKLDLETNKITEFIK 181
FK+C+V + G I +DGRTI + + IK DT+K+ + + +I E I
Sbjct: 114 FKICQVVRKNHVRGGALMIGLHDGRTILFRGEMLDKGRAIKTLDTLKIAVPSQEILETIS 173
Query: 182 FDVGNVVMVTGGRNRGRVGIIK--NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 239
D G + G G G I RE T ++ G T L N+ +G G
Sbjct: 174 LDNGVYAYIHSGARAGLHGKIMRIRREVVFPDKPTATVETGQG-TVTTLLRNLMPVG-GE 231
Query: 240 KPWVSL 245
PW++L
Sbjct: 232 APWITL 237
>gi|414877859|tpg|DAA54990.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 491
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 51/56 (91%)
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 414 MFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 469
>gi|414877860|tpg|DAA54991.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 476
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 51/55 (92%)
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 400 FKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 454
>gi|329009625|gb|AEB71432.1| Y-linked ribosomal protein S4 [Bubalus bubalis]
Length = 77
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 7/82 (8%)
Query: 72 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLC 131
+D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK +KLC
Sbjct: 3 IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK-------YKLC 55
Query: 132 KVRSVQFGQKGIPYINTYDGRT 153
KVR + G KGIP++ T+D RT
Sbjct: 56 KVRKIFVGTKGIPHLVTHDART 77
>gi|330835813|ref|YP_004410541.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
gi|329567952|gb|AEB96057.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
Length = 241
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 15/238 (6%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H+ RL AP K + + S GPH R +PL L++R+ L +A T +E I+
Sbjct: 3 HITRLEAPWFLKASKKEYKWTVRASPGPHPLRRSIPLGLLVRDYLSFATTLKESKKIISD 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD +VR D YP G MDV+SIP ++R++ D + I +EEAK
Sbjct: 63 GKVLVDGRVRRDYKYPVGLMDVISIPHAGLHYRIVPDKARLLKPIKISEEEAK------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPD-----PLIKANDTIKLDLETNKITEFIKF 182
FKL ++ + G+ ++ DGR I + I T+K+ + I +
Sbjct: 116 FKLVRLTGKSIIKGGLYQLHLEDGRNILLGNENSELSKIPTLSTLKVSIPVQSILSVYQM 175
Query: 183 DVGNVVMVTGGRNRGRVGIIKNRE--KHKG-SFETIHIQDALGHEFATRLGNVFTIGK 237
G VM GG+N G +G +K + +K + + I++ G E+ T L N IG+
Sbjct: 176 REGAQVMAIGGKNAGAIGQVKKIQIAPYKAKKYSIVIIRNPSGAEYETNLANAMVIGE 233
>gi|432091279|gb|ELK24482.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 203
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Query: 49 RNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 108
RNRLKYA+T EV I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG
Sbjct: 64 RNRLKYAVTGDEVKKICMQRFIKIDDKVRTDITYPAGFMDVISIDKTAENFRLIYDTKGH 123
Query: 109 FRLHSIRDEEAKALILLFQFKLCK 132
F LH I EEAK + LCK
Sbjct: 124 FALHCITPEEAK-------YNLCK 140
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 210 GSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSA 269
GSF+ +H++DA G+ FA +L N+F KG KPW+SLP GKGI L+I EE KR A S+
Sbjct: 145 GSFDVVHVKDANGNSFAIQLSNIFV--KGNKPWISLPHGKGIHLTIAEERDKRLAAKQSS 202
>gi|158563815|gb|ABW74359.1| ribosomal protein S4, partial [Modiolus modiolus]
Length = 73
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 134 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 193
R V KG+PY+ T+DGRTIRYPDPL+K NDT+ +D+ET KI +FIKFD GN+ M+TGG
Sbjct: 1 RKVGVALKGVPYVTTHDGRTIRYPDPLVKVNDTVMVDIETGKIKDFIKFDSGNLCMITGG 60
Query: 194 RNRGRVGIIKNRE 206
N GRVG++++RE
Sbjct: 61 HNLGRVGVVQHRE 73
>gi|119719161|ref|YP_919656.1| 30S ribosomal protein S4e [Thermofilum pendens Hrk 5]
gi|119524281|gb|ABL77653.1| SSU ribosomal protein S4E [Thermofilum pendens Hrk 5]
Length = 251
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 17/253 (6%)
Query: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61
+G +HL+R AP W + + + KPS GPH +P+ ++LR+ YA T +E
Sbjct: 5 VKGSLRHLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEA 64
Query: 62 IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKA 121
IL R + VD +V TD +P G MDV+ I + +R++ D + R I+ EEA
Sbjct: 65 RRILASRVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEA-- 122
Query: 122 LILLFQFKLCKVRSVQFGQKGIPYINTYDGRTI-------RYPDPL-IKANDTIKLDLET 173
+KL ++R + G +DGR + Y + K D + + +
Sbjct: 123 -----GYKLAQIRRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPR 177
Query: 174 NKITEFIKFDVGNVVMVTGGRNRGRVGIIKN-REKHKGSFETIHIQDALGHEFATRLGNV 232
I + F+VG + +V GRN G +G I ++ K S + ++DA G + T L V
Sbjct: 178 QSIVSHVPFEVGTLAIVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYV 237
Query: 233 FTIGKGTKPWVSL 245
+GK KP V++
Sbjct: 238 LPVGK-EKPLVTV 249
>gi|414884682|tpg|DAA60696.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 169
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 56/65 (86%)
Query: 118 EAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 177
E++ LL +FKLCKV S QFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DLET+KI
Sbjct: 83 ESQRAPLLEEFKLCKVSSAQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDLETSKIM 142
Query: 178 EFIKF 182
+FIK
Sbjct: 143 DFIKL 147
>gi|51011518|gb|AAT92168.1| ribosomal protein S4 [Ixodes pacificus]
Length = 81
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 60/74 (81%)
Query: 189 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 248
MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK TKP++SLP+G
Sbjct: 1 MVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRG 60
Query: 249 KGIKLSIIEEARKR 262
KGIKLS+ EE +R
Sbjct: 61 KGIKLSVAEERDRR 74
>gi|119872074|ref|YP_930081.1| 30S ribosomal protein S4 [Pyrobaculum islandicum DSM 4184]
gi|189045359|sp|A1RS06.1|RS4E_PYRIL RecName: Full=30S ribosomal protein S4e
gi|119673482|gb|ABL87738.1| SSU ribosomal protein S4E [Pyrobaculum islandicum DSM 4184]
Length = 238
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
HL+R AP W + K+GG + + S GPH LPL +I+R+ LKYA T RE I+
Sbjct: 3 HLRRTTAPYWWPIPRKIGGVWVVRSSPGPHSLAYSLPLAIIIRDVLKYAKTMREARYIIS 62
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ +V +D +R D +P G MDVV I T E +R++ D K + L I EEA
Sbjct: 63 RGYVKIDGVIRKDYKFPVGLMDVVEIVPTGEIYRVVPDEKKYYALIPISSEEA------- 115
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFD 183
KL +V + G ++ +DGR + + IK DT+ DL+ I I F
Sbjct: 116 TLKLLRVEGKTAVKGGKLQLHFHDGRNLIVSQDVGRHIKTFDTVLYDLQNKNIKMHIPFK 175
Query: 184 VGNVVMVTGGRNRGRVG 200
+G +VT G N G G
Sbjct: 176 LGAYAVVTRGGNVGFSG 192
>gi|219851119|ref|YP_002465551.1| 30S ribosomal protein S4e [Methanosphaerula palustris E1-9c]
gi|219545378|gb|ACL15828.1| Ribosomal protein S4E, central domain protein [Methanosphaerula
palustris E1-9c]
Length = 241
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 14/240 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +HLKRL AP+ W + K F K + GPH + LP+ + LR+ + +A T +EV I
Sbjct: 1 MSEHLKRLVAPRAWHIAKKTNTFISKTAPGPHNG-QALPIGVWLRDTMGFAQTLKEVKQI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L +R V+V+ + D G D+++IPK + +R+L GR SI E+AK+
Sbjct: 60 LNERSVIVNGRPCRDPKMGIGIFDIIAIPKMGKYYRILLAKNGRLVAISIEAEDAKS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK---ITEFIK 181
+LCKV+ G +N G + + D++ L LE + + +
Sbjct: 117 ----RLCKVQDKTIVSGGKTQVNLTYGANV-LTEEACSPKDSLVLSLEPEQRFTVLDHFP 171
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL--GHEFATRLGNVFTIGKGT 239
+ GN+ MV GGR+ G++G I+ GS I + + G +F T ++ +G+ T
Sbjct: 172 YKEGNMAMVIGGRHSGKIGKIQTITTVMGSTPNTVILEEVGTGTQFDTIDSYIYMVGRET 231
>gi|47079417|gb|AAT10160.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 232
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
H+KRL P+ W L + + KP+ G H C+PL +ILR+ L A RE +L
Sbjct: 3 SSHMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRML 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
R VLVD ++ TD G MDV+++ + ++FR + D G+ R SI D+ A +
Sbjct: 63 ATRQVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAAS---- 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP-LIKANDTIKLDLETNKITEFIKFDV 184
KLC+V G I+ +DGR I D L + DT+ + L + F
Sbjct: 117 ---KLCRVMGKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSK 173
Query: 185 GNVVMVTGGRNRGRVGIIKNRE-KHKGSFETIHIQDALGHEFATRLGNVFTIG 236
G +TGG + G + +R+ K + D F T VF IG
Sbjct: 174 GATAYLTGGSHIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>gi|379003364|ref|YP_005259036.1| 30S ribosomal protein S4E [Pyrobaculum oguniense TE7]
gi|375158817|gb|AFA38429.1| Ribosomal protein S4E [Pyrobaculum oguniense TE7]
Length = 238
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
HL+R AP W + K GG + KPS GPH LPL +++R+ L+YA T RE I+
Sbjct: 3 HLRRSLAPYWWPIPRKAGGVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVS 62
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ ++ VD VR D +P G MDV+ I T E +R++ D + L SI EA
Sbjct: 63 RGYIKVDGVVRKDYRFPVGLMDVIEIVPTGEVYRVVPDQDRYYNLLSIPSSEA------- 115
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRT-IRYPD--PLIKANDTIKLDLETNKITEFIKFD 183
KL +V G ++ +DGR I PD IK DTI DLE I I
Sbjct: 116 SLKLLRVEGKTTVNGGRLQLHFHDGRNLITSPDMGAKIKTFDTILYDLENKSIKTHIPMK 175
Query: 184 VGNVVMVTGGRNRGRVG 200
+G + +VT G N G G
Sbjct: 176 LGVMAVVTHGSNVGFSG 192
>gi|161751098|ref|NP_376299.2| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
gi|54039526|sp|Q975J2.2|RS4E_SULTO RecName: Full=30S ribosomal protein S4e
gi|342306184|dbj|BAK54273.1| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
Length = 243
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 15/237 (6%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H+ R AP L K + + + GPHK E +PL L+L++ L A T RE ++++
Sbjct: 3 HITRFEAPWFLNLSKKEYKWTIRANPGPHKLSESIPLALLLKHYLNVAETTREAKRLVVE 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
++VD +VR D +P G MDV+SIP ++ FR++ D I E+AK
Sbjct: 63 GKIMVDGRVRKDYKFPVGLMDVISIPSSDLYFRIVPDNIKYLMPVKISKEDAK------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLETNKITEFIKF 182
+K ++ + + G +N DGR I P + + T+K+++ + I + +
Sbjct: 116 YKFVRIVNKTTNKNGNIQLNLEDGRNILIPKEKVPEMNYPTLTTLKIEIPSQNIIKSYEL 175
Query: 183 DVGNVVMVTGGRNRGRVGIIKNRE---KHKGSFETIHIQDALGHEFATRLGNVFTIG 236
G ++ GGRN G G+IK + K + + I+ G T L NV IG
Sbjct: 176 SEGKYAIIIGGRNVGLHGVIKTIQYAKYKKRKYSIVTIEQKNGESVQTNLQNVMVIG 232
>gi|374630578|ref|ZP_09702963.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
gi|373908691|gb|EHQ36795.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
Length = 242
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ HLKRLN+P W + K F K + GPH S +P+ + LR+ + A +EV I
Sbjct: 1 MSNHLKRLNSPSGWRIPKKTNTFVKKTAPGPHNSH-AMPVAVWLRDHVGLANNVKEVKKI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L R ++V+ TD G D++SIPK + +R+L + KG + I ++ AK+
Sbjct: 60 LTDRSLIVNGSPCTDSKMGIGVFDIISIPKIGKYYRILRNKKGDYVSVEITEDAAKS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN---KITEFIK 181
+LCK+ + G +N G + D++ L LE K+ +
Sbjct: 117 ----RLCKISDKTIVKGGRIQLNLRYGANVIVDSQEYNPKDSVVLSLEPETRFKVIDHFP 172
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHI-QDALGHEFATRLGNVFTIGK 237
F VG+V M+ GG++ G+VG I GS I++ ++ G EF T VF +GK
Sbjct: 173 FAVGSVAMIIGGKHSGKVGKISEICVVPGSIPNRIYLTEEKTGVEFDTIEDYVFIVGK 230
>gi|374724277|gb|EHR76357.1| 30S ribosomal protein S4e [uncultured marine group II
euryarchaeote]
Length = 233
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 16/240 (6%)
Query: 4 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIA 63
G HLKRL P+ W L + + +P++G H C+P+ L++R+ L +A + REV
Sbjct: 2 GSSNHLKRLAMPRSWPLPRKTTIWVTRPTAGAHSLELCMPINLVIRDVLGFARSTREVRH 61
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
IL ++D +V + G MDV+S+ + ++R + D GR R I +EA
Sbjct: 62 ILHNGLAMIDGRVCKETRRGVGLMDVLSL--GDNHYRCVLDHNGRLRYRPISADEAG--- 116
Query: 124 LLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKF 182
+K+C++ + G +N +DGR I D ++KL L + +I E IKF
Sbjct: 117 ----WKVCRIEGKSTIKGGKTQLNLHDGRNIIVDDAAEYSTGSSLKLALPSQEIIEHIKF 172
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKP 241
G + GG + G + + E + S + +D F T NVF +G T P
Sbjct: 173 AEGVRCYLIGGAHVGGFANMTSFEVKRSSMANEVQFED-----FGTVATNVFAVGSATLP 227
>gi|414588670|tpg|DAA39241.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 472
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 51/56 (91%)
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 182
FKL KVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 395 MFKLYKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 450
>gi|145591931|ref|YP_001153933.1| 30S ribosomal protein S4 [Pyrobaculum arsenaticum DSM 13514]
gi|189045357|sp|A4WLL4.1|RS4E_PYRAR RecName: Full=30S ribosomal protein S4e
gi|145283699|gb|ABP51281.1| SSU ribosomal protein S4E [Pyrobaculum arsenaticum DSM 13514]
Length = 238
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
HL+R AP W + K GG + KPS GPH LPL +++R+ L+YA T RE I+
Sbjct: 3 HLRRSLAPYWWPIPRKAGGVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVS 62
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ ++ VD VR D +P G MDV+ I T E +R++ D + L I EA
Sbjct: 63 RGYIKVDGVVRKDYRFPVGLMDVIEIVPTGEVYRVVPDQDRYYNLLPIPSSEA------- 115
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRT-IRYPD--PLIKANDTIKLDLETNKITEFIKFD 183
KL +V G ++ +DGR I PD IK DTI DLE I I
Sbjct: 116 SLKLLRVEGKTTVNGGRLQLHFHDGRNLITSPDMGAKIKTFDTILYDLENKTIKTHIPMK 175
Query: 184 VGNVVMVTGGRNRGRVG 200
+G V +VT G N G G
Sbjct: 176 LGVVAVVTHGSNVGFSG 192
>gi|154150087|ref|YP_001403705.1| 30S ribosomal protein S4 [Methanoregula boonei 6A8]
gi|153998639|gb|ABS55062.1| Ribosomal protein S4E, central [Methanoregula boonei 6A8]
Length = 241
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 117/240 (48%), Gaps = 14/240 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ HLKRLNAP W + K F K + GPH + +P+ + LR++ A T +EV I
Sbjct: 1 MSDHLKRLNAPDSWHITKKTTKFVAKTAPGPHNA-NAMPVAVWLRDQQGLARTMKEVKQI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q+ V+++ + D G DV+++P+ + FR+L D KGR + I E A
Sbjct: 60 LKQKDVVINGRPVRDPKMGIGIFDVIALPRIGKYFRVLRDLKGRHKTVEIDAEAA----- 114
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN---KITEFIK 181
Q +LCK+ + G +N G I D K+ND++ + L+ KI E
Sbjct: 115 --QKRLCKIENKTIVPGGKVQLNLRYGANI-IADNTYKSNDSVVISLKPEDRFKILEHYP 171
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHE-FATRLGNVFTIGKGT 239
F GN+ + GGR+ G+V I K GS + ++D E F T ++ IGK T
Sbjct: 172 FVAGNMATIIGGRHSGKVARIIEIIKTPGSVPNKVILEDEKTKERFDTITPYIYMIGKET 231
>gi|379994273|gb|AFD22763.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 74
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 7/81 (8%)
Query: 64 ILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALI 123
I+ QR + VD K RTD TYPAGFMDV+SI KTNENFRLLYDTK RF L I EEAK
Sbjct: 1 IVKQRLLKVDGKARTDATYPAGFMDVISIEKTNENFRLLYDTKARFALKKITAEEAK--- 57
Query: 124 LLFQFKLCKVRSVQFGQKGIP 144
FKLC+V+ + GQKGIP
Sbjct: 58 ----FKLCRVKKLLVGQKGIP 74
>gi|193083743|gb|ACF09430.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 231
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAIL 65
+ H+KRL P+ W L + + KP+ G H C+PL LILR+ L A T RE IL
Sbjct: 3 RSHIKRLVMPRSWALPRKATIWVQKPNPGGHSIENCMPLALILRDILGVAHTRREANRIL 62
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILL 125
R V+VD ++ TD G MDV+++ N+R + DT G+ R I +A +
Sbjct: 63 HSRQVMVDGRIETDGGRGVGLMDVLTV--GGNNYRCVLDTNGKLRYRPIHARDADS---- 116
Query: 126 FQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLETNKITEFIKFDV 184
K+C+V + ++ +DGR + D K+ DT+ + L I+ F
Sbjct: 117 ---KVCRVMGKTTLRGSKSQLHLHDGRNLIMDDASAYKSGDTVVISLPEQDISAHHPFGD 173
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS 211
G V +TGG + G + ++ + + S
Sbjct: 174 GATVYLTGGSHIGEIVTVRGHDVKRSS 200
>gi|294496005|ref|YP_003542498.1| 30S ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
gi|292667004|gb|ADE36853.1| SSU ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
Length = 236
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KR++ PK W + K + GPH + +PL ++LR+ L E +
Sbjct: 1 MGKHQKRISVPKSWQISKKSRKWITSTRPGPHSKEQSVPLAVVLRDMLGIVDNRAEAKRV 60
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + VLVD VR D P G MD+++IP N ++R+L D GR L I E K
Sbjct: 61 LSEGKVLVDGVVRKDVRLPVGIMDIITIPSDNTSYRVLLDRMGRLSLQKIGGIEEK---- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
KLC++ + G +N DG + + K D+I + + +I + I++
Sbjct: 117 ----KLCRIDGKTCIKGGKLQLNLDDGSNVLGSNDY-KRKDSIVISIPGKEILKHIEYKE 171
Query: 185 GNVVMVTGGRNRGRVGII 202
GN+ ++ GG + G VG I
Sbjct: 172 GNLALIVGGSHTGEVGKI 189
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/54 (87%), Positives = 51/54 (94%)
Query: 164 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
N TIK+DLETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 340 NGTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 393
>gi|268325727|emb|CBH39315.1| 30S ribosomal protein S4e [uncultured archaeon]
Length = 235
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 119/233 (51%), Gaps = 11/233 (4%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KR+ AP+ W + + ++ P GPH +PL+L++R+ LK A RE IL +
Sbjct: 3 HQKRIAAPRSWKIKRKVSYWSVDPVPGPHPKDRSMPLLLLVRDLLKLADNSREAKRILNE 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+V+V+ KVR + +P G DV+S+PK ++ +L D KG+ L I DEEA
Sbjct: 63 GNVVVNGKVRKEHKFPIGIFDVLSVPKLKAHYMVLLDKKGKLSLIEI-DEEAAF------ 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYP---DPLIKANDTIKLDLETNKITEFIKFDV 184
+KLC+V + G +N +DGR I P + IK +D++ + + N+I + ++
Sbjct: 116 WKLCRVDGRTMIKAGKRQLNLHDGRNI-LPGERNEAIKTHDSLMISVPDNEILQHFAYEA 174
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
GN +V GG++ G I+ K K S + F T VF +GK
Sbjct: 175 GNKAVVIGGKHSAETGEIEEIRKTKSSDPNVVRIKQDERSFETIEDYVFVVGK 227
>gi|379994415|gb|AFD22834.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 124
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 55/65 (84%)
Query: 145 YINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKN 204
++ T+DGRTIRYPDPLI+AND++K+DL + KITEF+KF+ GN M+TGG N GRVG++ N
Sbjct: 1 FVVTHDGRTIRYPDPLIRANDSVKVDLASGKITEFVKFETGNTCMITGGHNMGRVGVVTN 60
Query: 205 REKHK 209
EKH+
Sbjct: 61 VEKHE 65
>gi|126460352|ref|YP_001056630.1| 30S ribosomal protein S4 [Pyrobaculum calidifontis JCM 11548]
gi|189045358|sp|A3MWZ7.1|RS4E_PYRCJ RecName: Full=30S ribosomal protein S4e
gi|126250073|gb|ABO09164.1| SSU ribosomal protein S4E [Pyrobaculum calidifontis JCM 11548]
Length = 237
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
HL++ AP W + K GG +A +PS+GPH LPL +++R+ L+YA T RE I+
Sbjct: 3 HLRKSLAPYWWPIPRKAGGVWAVRPSTGPHSLEYSLPLAVVVRDVLRYAKTLREARYIIS 62
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ ++ VD VR D +P G MDVV I T E +R++ D + L I EA
Sbjct: 63 RGYIKVDGVVRKDYKFPIGLMDVVEIVPTGEIYRVVPDEAKYYDLKPIPSSEA------- 115
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFD 183
K +V G ++ +DGR + P + IK DT+ DLE I +
Sbjct: 116 ALKPLRVEGKTAVSGGRIQLHFHDGRNLILPPDVGRQIKTFDTVVYDLENKAIKTHLPLR 175
Query: 184 VGNVVMVTGGRNRGRVG 200
+G + +VT G N G VG
Sbjct: 176 LGQLAVVTHGGNIGFVG 192
>gi|374326782|ref|YP_005084982.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
gi|356642051|gb|AET32730.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
Length = 238
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
HL++ AP W + K GG +A +PS GPH LPL +++R+ LKYA T RE I+
Sbjct: 3 HLRKSLAPYWWPIPRKAGGVWAIRPSPGPHSLAYSLPLAMVIRDVLKYAKTMREARYIIS 62
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ +V VD VR D +P G MDVV I T E +R++ D++ + L I EE+
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVVEIVPTGEVYRVVPDSEKYYNLLPIPSEES------- 115
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFD 183
KL +V + G ++ +DGR + L IK D++ DL+ I I
Sbjct: 116 SMKLLRVEGKTAVKGGKLQLHFHDGRNLITTPELGRQIKTFDSVLYDLQNKSIKMHIPLK 175
Query: 184 VGNVVMVTGGRNRGRVGII 202
+G V+ G N G G++
Sbjct: 176 LGVNVLAIHGSNVGFAGVL 194
>gi|171186001|ref|YP_001794920.1| 30S ribosomal protein S4e [Pyrobaculum neutrophilum V24Sta]
gi|226697784|sp|B1Y9S4.1|RS4E_THENV RecName: Full=30S ribosomal protein S4e
gi|170935213|gb|ACB40474.1| Ribosomal protein S4E, central domain protein [Pyrobaculum
neutrophilum V24Sta]
Length = 238
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 11/194 (5%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
HL+R +P W + K GG +A +PS GPH +PL L++R+ L+YA T RE I+
Sbjct: 3 HLRRTTSPYWWPIPRKAGGVWAVRPSPGPHSLAYSIPLALVIRDVLRYAKTLREARMIIS 62
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ ++ VD VR + +P G MDVV I T E +R++ D + + L I EEA
Sbjct: 63 RGYIKVDGVVRRNYKFPVGLMDVVEIVPTGEIYRVVPDERSYYALVPITSEEA------- 115
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFD 183
KL +V + G ++ +DGR + P IK D++ DL+ + I
Sbjct: 116 DLKLLRVEGKTAVKGGRLQVHFHDGRNLIMPAETARQIKTFDSVLYDLKARTVRSHIPMR 175
Query: 184 VGNVVMVTGGRNRG 197
+G +VT G N G
Sbjct: 176 LGVYAVVTHGGNVG 189
>gi|126178526|ref|YP_001046491.1| 30S ribosomal protein S4 [Methanoculleus marisnigri JR1]
gi|125861320|gb|ABN56509.1| SSU ribosomal protein S4E [Methanoculleus marisnigri JR1]
Length = 242
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 113/240 (47%), Gaps = 16/240 (6%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ K+LKRL AP W + K F K + GPH + LP+ + LR + A EV I
Sbjct: 1 MSKYLKRLVAPGSWHIPKKVQKFVMKTAPGPHNA-GALPVGVWLREHIGLAQNASEVKKI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L QR VLV+ + D G D+VSIPK +++R+ D KG I E AK
Sbjct: 60 LHQRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKT--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN-----KITEF 179
+LCK+R+ + G +N G + D KA D++ + L T+ +I +
Sbjct: 117 ----RLCKIRNKTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDH 171
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTIGK 237
+ GNV M+ GG++ G+VG I + S I D+ G F T VF +G+
Sbjct: 172 FPYAEGNVAMIVGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGR 231
>gi|1272662|emb|CAA94808.1| ribosomal protein S4 [Homo sapiens]
Length = 59
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 51/59 (86%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYAL R
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALDRR 59
>gi|414868178|tpg|DAA46735.1| TPA: hypothetical protein ZEAMMB73_851694 [Zea mays]
Length = 411
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 49/51 (96%)
Query: 167 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
+K+DLETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 353 VKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 403
>gi|161899455|ref|XP_001712961.1| ribosomal protein S4 [Bigelowiella natans]
gi|2500490|sp|Q40941.1|RS4_BIGNA RecName: Full=40S ribosomal protein S4
gi|1401207|gb|AAD05368.1| small subunit ribosomal protein 4 [Bigelowiella natans]
gi|75756456|gb|ABA27349.1| ribosomal protein S4 [Bigelowiella natans]
Length = 242
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 7/245 (2%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
MA+G+KKH KR+++ K G F K SSGPH + + L+ I++ A +E
Sbjct: 1 MAKGIKKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQE 60
Query: 61 VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120
++ + V+ K +P MD +S P N+++R+L G+ ++ I E
Sbjct: 61 AQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEK- 119
Query: 121 ALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
K+CKV + I T D R ++ IK D++ + ++I +
Sbjct: 120 ------DLKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYAL 173
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTK 240
KF+VG++ ++T G++ G + +IK K K + IH++ G + + ++ IG+
Sbjct: 174 KFEVGSLCLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKT 233
Query: 241 PWVSL 245
+SL
Sbjct: 234 SILSL 238
>gi|385805552|ref|YP_005841950.1| 30S ribosomal protein S4e [Fervidicoccus fontis Kam940]
gi|383795415|gb|AFH42498.1| 30S ribosomal protein S4e [Fervidicoccus fontis Kam940]
Length = 248
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G KHL+ +AP W + +A KPS GPH +PL ++LR+ LKYA T R
Sbjct: 1 MARMGGSKHLRSYSAPDFWPISTKERFWAIKPSPGPHSLSSSIPLGIVLRDYLKYARTKR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
EVI L V VD KVR D YP G MDV+ I ++ FR + + I EEA
Sbjct: 61 EVIRALSMGLVKVDGKVRKDYKYPVGAMDVIEIVPSSLFFRAVPNMDKFISFVEIPKEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-------------T 166
K ++ + G +N +DG I LIK +D T
Sbjct: 121 -------SIKPLRIENKTTVNHGHIQLNLFDGSNI-----LIKVSDPKNPTEVPYRTLST 168
Query: 167 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEF 225
+ + + +I ++I + G ++ GG+N G +G +K K + + + I+ G
Sbjct: 169 VIVKIPEREIIDYIPLEEGVYAIIFGGKNTGIMGKVKEIRKGMKRYRSLVVIETDDGSIA 228
Query: 226 ATRLGNVFTIGKGTKPWVSL 245
T L V IG+ KP + L
Sbjct: 229 QTSLDYVLAIGR-EKPIIKL 247
>gi|290558898|gb|EFD92288.1| RNA-binding S4 domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 220
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 108/204 (52%), Gaps = 11/204 (5%)
Query: 1 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
MAR G KH KR ++ + + KP G H S++ + ++ LR+ LK A R
Sbjct: 1 MARHGESKHFKRSVVTASLVIPRKKYKYYTKPLPGKHSSKDGVSILGFLRDVLKIAANAR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
E ++ +V VD K ++ Y GF D+VS+ +N+ L++ G+ +L S++ +E
Sbjct: 61 EARYLIKNGYVFVDGKKVIEEKYVVGFSDIVSVK---DNYFLVW-LSGKGKLISVKKDEK 116
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
KL KV S G+KG+ + T D R I YP ++ ND++ LDL++ IT
Sbjct: 117 ------IDSKLIKVMSKHKGKKGMNILFTNDSRNIVYPKDDVQINDSVSLDLKSYSITGK 170
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIK 203
I F+ G ++V G+N G+ G+IK
Sbjct: 171 IPFESGKNIIVFSGKNAGKKGVIK 194
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 50/54 (92%)
Query: 164 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
N TIK+DLETNKI +FIKFDVGNVVM+TGGRN G VG+IKNREKHKGSFETIH+
Sbjct: 188 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTGHVGVIKNREKHKGSFETIHV 241
>gi|70606400|ref|YP_255270.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius DSM 639]
gi|449066612|ref|YP_007433694.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
gi|449068886|ref|YP_007435967.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
gi|3914911|sp|O05634.1|RS4E_SULAC RecName: Full=30S ribosomal protein S4e
gi|2052258|emb|CAA69089.1| ribosomal protein S4E [Sulfolobus acidocaldarius]
gi|68567048|gb|AAY79977.1| 30S ribosomal protein S4E [Sulfolobus acidocaldarius DSM 639]
gi|449035120|gb|AGE70546.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
gi|449037394|gb|AGE72819.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
Length = 244
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 21/241 (8%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H+ R AP + K + + +GPHK +E +PL ++L+ LK T RE I+
Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD KVR D YP G MDVV IP + R++ D +I E+AK
Sbjct: 63 GKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAK------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTI--------RYPDPLIKANDTIKLDLETNKITEF 179
+K ++ + + G+ +N DGR I +Y P + T+K++L KIT
Sbjct: 116 YKFVRIMNKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTL---TTLKIELPEQKITTA 172
Query: 180 IKFDVGNVVMVTGGRN---RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 236
G M+ GGRN G++ I+ + + + + ++ G F T L NV IG
Sbjct: 173 YTIKEGVYAMIIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIG 232
Query: 237 K 237
+
Sbjct: 233 E 233
>gi|268323249|emb|CBH36837.1| 30S ribosomal protein S4e [uncultured archaeon]
Length = 235
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 117/232 (50%), Gaps = 9/232 (3%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H KR+ AP+ W + + ++ P GPH +PL+L++R+ LK A RE IL +
Sbjct: 3 HQKRIAAPRSWKIKRKVSYWSVDPVPGPHPKDRSMPLLLLVRDLLKLADNSREAKRILNE 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
+V+V+ KVR + +P G DV+S+PK ++ +L D KG+ L I +E A
Sbjct: 63 GNVVVNGKVRKEHKFPIGIFDVLSVPKLKAHYMVLLDKKGKLSLIEIDEEVASR------ 116
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPD--PLIKANDTIKLDLETNKITEFIKFDVG 185
KLC+V ++G +N +DGR I + IK +D++ + + N+I + ++ G
Sbjct: 117 -KLCRVDGRTMIKEGKRQLNLHDGRNILPGERSEEIKTHDSLMISVPDNEILQHFAYEAG 175
Query: 186 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 237
N +V GG++ G I+ K + S + F T VF +GK
Sbjct: 176 NKAVVIGGKHSAETGEIEEIRKTESSDPNVVRIKQDERSFETIEDYVFVVGK 227
>gi|255098783|gb|ACU00732.1| 40S ribosomal protein S4 [Nosema bombycis]
gi|326559168|gb|ADZ95623.1| 40S ribosomal protein S4 [Nosema bombycis]
Length = 172
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Query: 101 LLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 160
+LY +F +H I EA FKL KV S + + +PYI T DG RY DP
Sbjct: 1 MLYSVDKKFHIHKIDKAEA-------SFKLAKVISKKTMYEDVPYIFTNDGSCFRYCDPK 53
Query: 161 IKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDA 220
I+ NDT+K+DL + K+ +FI F+ VV V G + GRV +IK+ ++ S I ++D
Sbjct: 54 IEVNDTVKIDLASRKVVDFIPFETDKVVYVIKGEDMGRVCVIKHIKEVDYSDSIITVEDF 113
Query: 221 LGHEFATRLGNVFTIGKGTKP-WVSLPKGKGIKLSIIEEA 259
F N+ IG +SLP +GIKL+ +EE+
Sbjct: 114 AKKVFTIPSKNLIVIGNSEDNLLISLPAQRGIKLNELEES 153
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 50/54 (92%)
Query: 164 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
N TIK+DLETNKI +FIKFDVGNVVM+TGG N GRVG+IKNREKHKGSFETIH+
Sbjct: 303 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGTNTGRVGVIKNREKHKGSFETIHV 356
>gi|448503700|ref|ZP_21613329.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
gi|445691901|gb|ELZ44084.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
Length = 237
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+ P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPNSWPVERKTNTFTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L +LV+ +D+ P G D+++ P+ E FR+ D GR L + ++ A +
Sbjct: 60 LNNDSILVNGDAVSDEQRPIGMFDILAFPERGEYFRVFPDEGGRLALTPVDEDAAGS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFD 183
+L K+ + G+ + +DG +R D + ND+I +D ET +I +++
Sbjct: 117 ----RLGKITNKTVVPGGVVQLTLHDGTNVRVDDDADYETNDSIVVDNETKEIVAHFEYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G++ G++G I++ + GS
Sbjct: 173 EGELVTAVAGQHAGQIGEIEDIDVTLGS 200
>gi|41615262|ref|NP_963760.1| 30S ribosomal protein S4e [Nanoarchaeum equitans Kin4-M]
gi|54039525|sp|P62429.1|RS4E_NANEQ RecName: Full=30S ribosomal protein S4e
gi|40068986|gb|AAR39321.1| NEQ478 [Nanoarchaeum equitans Kin4-M]
Length = 234
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MARGLKKHLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 59
M +K+HL+ L P+ W + K G + KPS GPH +P+ + LR+ L A R
Sbjct: 1 MPTYIKRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMR 60
Query: 60 EVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA 119
EV +L VLVD + D +P G DV++IP+ NE +R+L D +G+ L I EEA
Sbjct: 61 EVRYLLNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEA 120
Query: 120 KALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEF 179
+ K+ + SV+ G+ I Y T DGRT D K + + ++ KI E
Sbjct: 121 N----IKYGKIIRKVSVRGGK--IQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREV 172
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 235
I + + G++ GR+G+IK K + I + G T L N+ +
Sbjct: 173 IPLEKDRKAYIIRGKHTGRIGVIKEVIKTDMPWPNIVRLEVAGEVGETWLDNIIPV 228
>gi|448386101|ref|ZP_21564309.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
gi|445655999|gb|ELZ08841.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
Length = 232
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 8/207 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +L++ D+ P G D+V+ P E +R+ D GR L I +E A
Sbjct: 60 LSEDAILINGDAINDEQRPIGMFDIVAFPGRGEYYRVFPDEGGRLALTEIDEESA----- 114
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
Q +L K+ Q G + +DG + D +AND+I +D + I ++
Sbjct: 115 --QSRLGKIEGKQQVPGGDTQLTLHDGTNVLVDDDEYQANDSIVIDNDDKSIVAHFPYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G + + GS
Sbjct: 173 GALVTAVRGNHGGKIGEVDAIDVTPGS 199
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 50/54 (92%)
Query: 164 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
N TIK+DLETNKI +FIKFDVGNVVM+TGGRN RVG+IKNREKHKGSFETIH+
Sbjct: 158 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTMRVGVIKNREKHKGSFETIHV 211
>gi|413950347|gb|AFW82996.1| hypothetical protein ZEAMMB73_922081 [Zea mays]
Length = 138
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 49/51 (96%)
Query: 167 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
+K++LETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 80 VKINLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 130
>gi|77024951|gb|ABA61378.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 232
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H+KRL P+ W L + + +P H C+ + ++LR+ + A + RE L
Sbjct: 5 HMKRLAMPRSWPLTRKTDIWISRPRPSGHPLERCMAMGVVLRDVIGVAKSMREAKRALAT 64
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
R + VD +V TD G MDV+S+ ++++R + D G+ R SI +EA
Sbjct: 65 RKIRVDGRVTTDIRRGVGVMDVLSVG--DDHYRCVLDKNGKLRYASISAKEA-------G 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP-LIKANDTIKLDLETNKITEFIKFDVGN 186
KLC++ + G+ +N +DGR I D DT+ LD+E+ KI KF+ G
Sbjct: 116 HKLCRIDGKTTIKGGVTQLNLHDGRNILVDDANKYNTMDTLVLDVESQKIEGHHKFEAGA 175
Query: 187 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 241
+ GG + G + + S + + L +F T + +VF IG P
Sbjct: 176 NCYLIGGSHTGGTAAMNEYLVKRSSKD----NEVLFEDFGTIVDHVFVIGDANLP 226
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 49/54 (90%)
Query: 164 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
N TIK+DLETNKI +FIKFDVGNVVMVT GRN G VG+IKNREKHKGSFETIH+
Sbjct: 210 NGTIKIDLETNKIMDFIKFDVGNVVMVTSGRNTGHVGVIKNREKHKGSFETIHV 263
>gi|413948894|gb|AFW81543.1| hypothetical protein ZEAMMB73_624427 [Zea mays]
Length = 76
Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/51 (84%), Positives = 49/51 (96%)
Query: 167 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
+K+DLETNKI +FIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 18 VKIDLETNKIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 68
>gi|448730389|ref|ZP_21712697.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
gi|445793557|gb|EMA44129.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
Length = 265
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 10/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MSKHQKRLSVPNSWPVERKTEKFTVKAGAGPH-GESGVPLLVVLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VLV+ D+ P G D++ + NE++R+ D GR L +I ++A +
Sbjct: 60 LNQGSVLVNGDALDDEERPIGMFDILEFDERNEHYRVFPDEGGRLALTTIDADDADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKA-NDTIKLDLETNKITEFIKFD 183
KL K+ Q G + +DGRT+ D A +D+I +D E ++I ++
Sbjct: 117 ----KLGKIEGKQQVSGGATQLALHDGRTLEVDDASEYAGSDSIVVD-EDDEILAHFSYE 171
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V GR+ G VG I + + GS
Sbjct: 172 EGALVTAVEGRHAGEVGEIDDIQVTPGS 199
>gi|448489452|ref|ZP_21607675.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
19288]
gi|445694824|gb|ELZ46942.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
19288]
Length = 214
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 9/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+ P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPNSWPVERKTDTFTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L +LV+ +D+ P G D+++ P+ E FR+ D GR L + ++ A +
Sbjct: 60 LNNDSILVNGDAISDEQRPIGMFDILAFPERGEYFRVFPDEGGRLALTPVDEDAAGS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFD 183
+L K+ + G+ + +DG +R D + ND+I +D ET +I +++
Sbjct: 117 ----RLGKITNKTVVPGGVVQLTLHDGTNVRVDDDADYETNDSIVVDNETKEIVAHFEYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G++ G++G I + + GS
Sbjct: 173 EGALVTAVAGQHAGQIGEIDDIDVTLGS 200
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 164 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
N TIK+DLETNKI +FIKFDVGN VMVTGGRN RVG+IKN EKHKGSFETIH+
Sbjct: 205 NGTIKIDLETNKIMDFIKFDVGNAVMVTGGRNTVRVGVIKNMEKHKGSFETIHV 258
>gi|414888286|tpg|DAA64300.1| TPA: hypothetical protein ZEAMMB73_830062 [Zea mays]
Length = 387
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 167 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
+K+DLETNKI +FIKFDVGNVVMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 329 VKIDLETNKIMDFIKFDVGNVVMVTGRRNTGRVGVIKNREKHKGSFETIHV 379
>gi|414869820|tpg|DAA48377.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 207
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 79/169 (46%), Gaps = 72/169 (42%)
Query: 66 MQRHVLVDAKVRTDKTYPAGFMDV-VSIPKTNENFR--LLYD------------------ 104
+QRHVLVD KVRTDKTYPAGFM + +S+ + + L+ D
Sbjct: 70 LQRHVLVDGKVRTDKTYPAGFMGMPISLLMHKDTYTPILVADLWCHFFGRCHFHSLRQTR 129
Query: 105 TKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 164
T FRLH IRDE+AK FKLC RS+Q
Sbjct: 130 TTCCFRLHPIRDEDAK-------FKLCNGRSIQ--------------------------- 155
Query: 165 DTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 213
FDVGNVVMVTGGRN GRVG+IKN EKHKG FE
Sbjct: 156 -----------------FDVGNVVMVTGGRNTGRVGVIKNWEKHKGIFE 187
>gi|18313980|ref|NP_560647.1| 30S ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
gi|23822150|sp|Q8ZTD3.1|RS4E_PYRAE RecName: Full=30S ribosomal protein S4e
gi|18161555|gb|AAL64829.1| ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
Length = 238
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 8 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILM 66
HL+R AP W + K GG + +PS GPH LPL LI+R+ LKYA T E I+
Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62
Query: 67 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLF 126
+ +V VD VR D +P G MDV+ I T E +R++ D + L I EEA
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEA------- 115
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGR---TIRYPDPLIKANDTIKLDLETNKITEFIKFD 183
KL +V + G ++ +DGR T IK D++ DL I I
Sbjct: 116 ALKLLRVEGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLK 175
Query: 184 VGNVVMVTGGRNRGRVGII 202
+G +V G N G G +
Sbjct: 176 LGVNAVVIHGSNVGFSGTL 194
>gi|429190332|ref|YP_007176010.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
gi|448326244|ref|ZP_21515611.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
gi|429134550|gb|AFZ71561.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
gi|445612901|gb|ELY66618.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
Length = 243
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTEVFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ + D+ P G D+V+ P E +R+ D GR L I + A++
Sbjct: 60 LSEDAILVNGEPINDEQRPIGIFDIVAFPGREEYYRVFPDEGGRLSLTGIDADSAES--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+L K+ S Q G + +DG + D D+I +D + I ++
Sbjct: 117 ----RLGKIESKQQVSGGDTQLTLHDGTNVIADDDGYSTTDSIVVDNDDKSIVAHFPYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G I++ E GS
Sbjct: 173 GALVTAVRGNHGGKIGEIESIEVTPGS 199
>gi|329317629|gb|AEB90949.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD K+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 84 AGFM 87
AGFM
Sbjct: 61 AGFM 64
>gi|329317633|gb|AEB90951.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD K+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 84 AGFM 87
AGFM
Sbjct: 61 AGFM 64
>gi|413947184|gb|AFW79833.1| putative leucine-rich repeat receptor-like protein kinase family
protein [Zea mays]
Length = 368
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 127 QFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 171
QFKLCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DL
Sbjct: 324 QFKLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDL 368
>gi|329317631|gb|AEB90950.1| putative ribosomal protein S4 [Mesopolobus amaenus]
Length = 113
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 24 GGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYP 83
GG +AP+PS+GPHK RE LPL++ LRNRLKYALT EV I+MQR + VD K+RTD YP
Sbjct: 1 GGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYP 60
Query: 84 AGFM 87
AGFM
Sbjct: 61 AGFM 64
>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
Length = 296
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 164 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
N TIK+DLETNKI +FIKFD+ NVVMVT GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 235 NGTIKIDLETNKIMDFIKFDIDNVVMVTSGRNTGRVGVIKNREKHKGSFETIHV 288
>gi|409731012|ref|ZP_11272562.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
gi|448724770|ref|ZP_21707275.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
gi|445784979|gb|EMA35775.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
Length = 253
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 17/211 (8%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ P W +++ F K ++GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MSKHQKRLSVPNSWPVERKTATFTVKATAGPH-GEDGVPLLILLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VLV+ + +D+ P G D+V + +E++R+ D GR L I +A +
Sbjct: 60 LNQGSVLVNNETLSDEQRPIGMFDIVEFAERDEHYRVFPDEGGRLALTPIDAADADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINT----YDGRTIRYPDPLIKANDTIKLDLETNKITEFI 180
KL K+ G++ +P NT +DGRT+ + ND+I +D + N+I
Sbjct: 117 ----KLGKIE----GKRQVPGGNTQLSLHDGRTLEIDEGDYAGNDSIVVDTD-NEILAHF 167
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKNREKHKGS 211
++ G +V G++ G +G I + GS
Sbjct: 168 PYEEGALVTAVRGQHAGEIGEIDEIQVTPGS 198
>gi|374633056|ref|ZP_09705423.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
gi|373524540|gb|EHP69417.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
Length = 242
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 110/241 (45%), Gaps = 20/241 (8%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H+ RLNAP L K + KP GPH +PL ++LR+ L A RE I+
Sbjct: 3 HITRLNAPWFLRLSKKEYKWTVKPIPGPHPLSRSIPLGILLRDYLGIASNLRESKKIISD 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
V+VD +VR D YP G MDV++IP + +R++ D ++ I EEA
Sbjct: 63 GLVMVDGRVRRDYKYPVGLMDVITIPSASLYYRVVPDRVRLLKVVKISSEEAG------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN------DTIKLDLETNKITEFIK 181
+KL ++ + +N DGR I D + T K+ + + +I +
Sbjct: 116 YKLVRLTGKTVVKGSALQLNFEDGRNILLKDKQEASQFNMPTLTTFKIAIPSQQILGTYQ 175
Query: 182 FDVGNVVMVTGGRNRGRVGIIK-----NREKHKGSFETIHIQDALGHEFATRLGNVFTIG 236
G VM GG+N G +G +K N +K + + I +D G E+ T L N +G
Sbjct: 176 LKEGVYVMAIGGKNAGVIGTLKRIQWANYKKKRHTIVVIRGED--GTEYETNLENSMVVG 233
Query: 237 K 237
+
Sbjct: 234 E 234
>gi|354610525|ref|ZP_09028481.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
gi|353195345|gb|EHB60847.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
Length = 233
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH +PL+++LR+ L Y E
Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLGYVDDTSEAQYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
+ VLV+ D P G D+++ P +E +R+ D GR L I + A +
Sbjct: 60 INTDGVLVNGASVGDVKRPIGMFDILAFPARDEYYRVFPDEGGRLGLTPIEADAADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
KL KV G +N +DG + D +D++ ++ ETN+I +++
Sbjct: 117 ----KLNKVEDKTTVSGGQTQLNFHDGTNLLVEDDSYSGSDSVVVENETNEIVAHFEYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFE-TIHIQ 218
G +V G++ G +G +++ GS E T+ ++
Sbjct: 173 GALVTAVAGQHAGEIGTVEDITVQPGSAENTVRVE 207
>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
Length = 279
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 49/54 (90%)
Query: 164 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
N TIK+DLETNKI +FIKFDV NVVM++GGRN G VG+IKNREKHKGSFETIH+
Sbjct: 218 NGTIKIDLETNKIMDFIKFDVDNVVMMSGGRNTGHVGVIKNREKHKGSFETIHV 271
>gi|448415407|ref|ZP_21578207.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
gi|445681065|gb|ELZ33506.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
Length = 252
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+AP W +++ F K +GPH + +PL+++LR+ L YA + +E
Sbjct: 1 MTKHQKRLSAPNSWPIERKEETFTVKAGAGPH-GQAGVPLLILLRDVLGYADSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VLV+ +D++ P G D+++ + E FR+ D GR L I E A +
Sbjct: 60 LNQDTVLVNGDAVSDESRPIGMFDILAFTEREEYFRVFPDEGGRLALTPIDAESADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP----LIKANDTIKLDLETNKITEFI 180
+L KV Q + G + +DG +R D + D++ +D ET +I
Sbjct: 117 ----RLGKVAGKQSVKGGATQLTLHDGSNVRVEDEDDPDQYHSKDSLVVDNETKEIVAHF 172
Query: 181 KFDVGNVVMVTGGRNRGRVGII 202
++ G +V G + G +G +
Sbjct: 173 PYEEGALVTAVDGTHAGEIGEV 194
>gi|433590206|ref|YP_007279702.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
gi|448332388|ref|ZP_21521632.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
gi|433304986|gb|AGB30798.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
gi|445627492|gb|ELY80816.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
Length = 232
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +L++ D+ P G D+V+ P E +R+ D GR L I +E A
Sbjct: 60 LSEDAILINGDAINDEQRPIGMFDIVAFPGRGEYYRVFPDEGGRLALTEIDEESA----- 114
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
Q +L K+ Q G + +DG + D +A D+I +D + I ++
Sbjct: 115 --QSRLGKIEGKQQVPGGDTQLTLHDGTNVLVDDDEYQAKDSIVIDNDDKSIVAHFPYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G + + GS
Sbjct: 173 GALVTAVRGNHGGKIGEVDAIDVTPGS 199
>gi|414888288|tpg|DAA64302.1| TPA: hypothetical protein ZEAMMB73_830062 [Zea mays]
Length = 76
Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 167 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
+K+DLETNKI +FIKFDVGNVVMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 18 VKIDLETNKIMDFIKFDVGNVVMVTGRRNTGRVGVIKNREKHKGSFETIHV 68
>gi|110668729|ref|YP_658540.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
gi|109626476|emb|CAJ52937.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
Length = 265
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 11/212 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+AP W +++ F K +GPH +PL+++LR+ L YA + +E
Sbjct: 1 MTQHQKRLSAPNSWPIERKTETFTVKAGAGPH-GESGVPLVILLRDVLGYADSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L QR VLV+ V +D+ P G D+++ + E +R+ + GR L I +A +
Sbjct: 60 LNQRSVLVNGDVVSDEQRPVGLFDILAFTEREEYYRVFPEAGGRLALTPIDISDANS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKAN--DTIKLDLETNKITEFIK 181
+L K+ + Q G + +DG IR D + N D++ +D ET +I
Sbjct: 117 ----RLGKIINKQQVSGGAIQLTLHDGANIRVNADEIDTYNPRDSLVIDNETKEIVAHFP 172
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 213
++ G +V G++ G +G I+ GS E
Sbjct: 173 YEEGALVTAVSGKHSGEIGEIETITVTAGSSE 204
>gi|385804229|ref|YP_005840629.1| 30S ribosomal protein S4 [Haloquadratum walsbyi C23]
gi|339729721|emb|CCC40999.1| 30S ribosomal protein S4e [Haloquadratum walsbyi C23]
Length = 265
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 11/212 (5%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+AP W +++ F K +GPH +PL+++LR+ L YA + +E
Sbjct: 1 MTQHQKRLSAPDSWPIERKTETFTVKAGAGPH-GESGVPLVILLRDVLGYADSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L QR VLV+ V +D+ P G D+++ + E +R+ + GR L I +A +
Sbjct: 60 LNQRSVLVNGDVVSDEQRPVGLFDILAFTEREEYYRVFPEAGGRLALTPIDISDANS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKAN--DTIKLDLETNKITEFIK 181
+L K+ + Q G + +DG IR D + N D++ +D ET +I
Sbjct: 117 ----RLGKIINKQQVSGGAIQLTLHDGANIRVNADEIDTYNPRDSLVIDNETKEIVAHFP 172
Query: 182 FDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 213
++ G +V G++ G +G I+ GS E
Sbjct: 173 YEEGALVTAVSGKHSGEIGEIETITVTAGSSE 204
>gi|257053371|ref|YP_003131204.1| 30S ribosomal protein S4e [Halorhabdus utahensis DSM 12940]
gi|256692134|gb|ACV12471.1| Ribosomal protein S4E, central domain protein [Halorhabdus
utahensis DSM 12940]
Length = 286
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KRL+ P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MSNHQKRLSVPNSWPIERKTETFTVKADAGPH-GEAGVPLLIVLRDVLGYVDSRKEARFA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VL++ +D+T P G D+++ + E +R+ GR L I ++ A
Sbjct: 60 LDQDQVLINGDPESDETRPVGMFDILAFTEREEFYRVFPGEGGRLALTPIDEDSA----- 114
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYP-DPLIKANDTIKLDLETNKITEFIKFD 183
Q KL K+ QF G + +DG T+ D + ND++ ++ ++ +I +++
Sbjct: 115 --QSKLGKIVGKQFVPGGDLQLTLHDGETLLVSEDAPYEGNDSVVVENDSEEIVAHFEYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFET 214
G +V G++ G +G I+ + GS E
Sbjct: 173 EGALVTAVDGQHAGEIGTIEEIQVTPGSAEN 203
>gi|335437500|ref|ZP_08560276.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|335438897|ref|ZP_08561628.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|334890168|gb|EGM28442.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|334895848|gb|EGM34011.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
Length = 277
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KRL+ P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MSNHQKRLSVPNSWPIERKTETFTVKADAGPH-GEAGVPLLIVLRDVLGYVDSRKEARFA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VL++ +D+T P G D+++ + E +R+ GR L I ++ A
Sbjct: 60 LDQDQVLINGDPESDETRPVGMFDILAFTEREEFYRVFPGEGGRLALTPIDEDSA----- 114
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYP-DPLIKANDTIKLDLETNKITEFIKFD 183
Q KL K+ QF G + +DG T+ D + ND+I ++ ++ ++ +++
Sbjct: 115 --QSKLGKIVQKQFVPGGDLQLTLHDGETLLVSEDAPYEGNDSIVVENDSEEVIAHFEYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFET 214
G +V G++ G +G I+ + GS E
Sbjct: 173 EGALVTAVDGQHAGEIGTIEEIQVTPGSAEN 203
>gi|15790644|ref|NP_280468.1| 30S ribosomal protein S4 [Halobacterium sp. NRC-1]
gi|169236383|ref|YP_001689583.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
gi|17368985|sp|Q9HPC2.1|RS4E_HALSA RecName: Full=30S ribosomal protein S4e
gi|226697782|sp|B0R668.1|RS4E_HALS3 RecName: Full=30S ribosomal protein S4e
gi|10581171|gb|AAG19948.1| 30S ribosomal protein S4E [Halobacterium sp. NRC-1]
gi|167727449|emb|CAP14237.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
Length = 233
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 9/219 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH +PL+++LR+ L+Y E
Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
+ VLV+ D P G D+++ P +E +R+ D GR L I + A +
Sbjct: 60 INTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
KL KV G +N +DG + + D++ +D +TN+I +++
Sbjct: 117 ----KLNKVTDKTTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFE-TIHIQDALG 222
G +V G++ G +G I GS T+ + D G
Sbjct: 173 GALVTAVAGQHAGDIGEIAEINVQPGSASNTVRVDDENG 211
>gi|448377818|ref|ZP_21560514.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
gi|445655762|gb|ELZ08607.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
Length = 244
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 9/212 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH + +PL+++LR+ L+Y +E
Sbjct: 1 MSNHQKRLSVPKSWPVERKTDTFTVKAGAGPH-GEDGVPLLILLRDVLEYVDNRKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L VLV+ +D+ P G D+++ P E +R+ D GR L I E A++
Sbjct: 60 LANDAVLVNGDEISDEERPIGMFDILAFPDREEAYRVFPDEGGRLSLTPIDAESAES--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI-KANDTIKLDLETNKITEFIKFD 183
+L KV + G+ ++ +DG + D ND++ +D E+ +I ++
Sbjct: 117 ----RLGKVEGKRQVTGGVTQLSLHDGTNVTVDDEATYGVNDSVVVDNESKEIVAHFPYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 215
G +V G + G++G I + GS I
Sbjct: 173 DGALVTAVRGNHAGKIGQIAEIDVTPGSGSNI 204
>gi|452206436|ref|YP_007486558.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
gi|452082536|emb|CCQ35794.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
Length = 269
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 17/225 (7%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL PK W +++ + K ++GPH +PL+++LR+ L YA + +E
Sbjct: 1 MTKHQKRLAVPKSWPVERKEETYTTKAAAGPH-GEAGVPLLIVLRDVLGYADSKKETRYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VLV+ K +D+ P G D+++ + E +R+ D GR L I E A +
Sbjct: 60 LEQDSVLVNGKAVSDERQPIGMFDILAFREREEYYRVFPDEGGRLSLTPIDAESAGS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINT----YDGRTIRYPDPLI-KANDTIKLDLETNKITEF 179
KL K+ G+ +P +T +DG+T+ D ND+I + + +I
Sbjct: 117 ----KLGKI----VGKAQVPGGDTQLTLHDGQTLLVEDATTYDGNDSIVVSNDAEEIVAH 168
Query: 180 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHE 224
++ G +V G + GR+G I + GS + +A G E
Sbjct: 169 FTYEKGALVTAVSGAHAGRIGTIDEIQVTPGSSPNNVLIEAAGGE 213
>gi|448369927|ref|ZP_21556380.1| 30S ribosomal protein S4e [Natrialba aegyptia DSM 13077]
gi|445650367|gb|ELZ03291.1| 30S ribosomal protein S4e [Natrialba aegyptia DSM 13077]
Length = 248
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTEVFTVKADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + ++V+ + D+ P G D+++ P E +R+ D GR L I +E A +
Sbjct: 60 LSEDSIIVNGEPINDEQRPIGIFDILAFPGRGEFYRVFPDEGGRLALTEIDEESADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+L K+ Q G + +DG T+ D A D++ +D E I ++
Sbjct: 117 ----RLGKIDGKQQVPGGDTQLTLHDGTTVLVDDEF-SAKDSVVVDNEDKSIVAHFPYEE 171
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G +++ + GS
Sbjct: 172 GALVTAIRGNHGGKIGEVESIDVTPGS 198
>gi|193084304|gb|ACF09963.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 221
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDA 74
P+ W L + + KP+ G H C+PL LILR+ L A T RE IL R V+VD
Sbjct: 2 PRSWALPRKTTIWVQKPNPGGHSIENCMPLALILRDILGVAHTRREANRILHSRQVMVDG 61
Query: 75 KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVR 134
++ TD G MDV+++ N+R + DT G+ R I +A + K+C+V
Sbjct: 62 RIETDGGRGVGLMDVLTV--GGNNYRCVLDTNGKLRYRPIHARDADS-------KVCRVM 112
Query: 135 SVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 193
+ ++ +DGR + D K+ DT+ + L I+ F G V +TGG
Sbjct: 113 GKTTLRGSKSQLHFHDGRNLIMDDTSAYKSGDTVVISLPEQDISAHHPFGDGATVYLTGG 172
Query: 194 RNRGRVGIIKNREKHKGS 211
+ G + ++ + + S
Sbjct: 173 SHIGEIVTVRGHDVKRSS 190
>gi|448323151|ref|ZP_21512615.1| 30S ribosomal protein S4e [Natronococcus amylolyticus DSM 10524]
gi|445600337|gb|ELY54350.1| 30S ribosomal protein S4e [Natronococcus amylolyticus DSM 10524]
Length = 236
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 8/223 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K SGPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTNVFTVKADSGPH-GEDGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q +L++ + D+ P G D+V+ P E +R+ D GR L I + A +
Sbjct: 60 LSQDSILINGEPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTEIDADAADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+L K+ + G + +DG I + ND++ +D + + ++
Sbjct: 117 ----RLGKIEGKRQVPGGDTQLTLHDGTNILAEESEYSTNDSVVVDNDDKSVVAHFPYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 227
G +V G + G++G + + GS I DA F T
Sbjct: 173 GALVTAISGNHGGKIGEVTEIDVTPGSGSNIVTVDADDGLFET 215
>gi|448350193|ref|ZP_21539012.1| 30S ribosomal protein S4e [Natrialba taiwanensis DSM 12281]
gi|445637700|gb|ELY90848.1| 30S ribosomal protein S4e [Natrialba taiwanensis DSM 12281]
Length = 248
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTEVFTVKADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + ++V+ + D+ P G D+++ P E +R+ D GR L I +E A +
Sbjct: 60 LSEDSIIVNGEPINDEQRPIGIFDILAFPGRGEFYRVFPDEGGRLALTEIDEESADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+L K+ Q G + +DG T+ D A D++ +D E I ++
Sbjct: 117 ----RLGKIDGKQQVPGGDTQLTLHDGTTVLVDDEF-SAKDSVIVDNEDKSIVAHFPYEE 171
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G +++ + GS
Sbjct: 172 GALVTAIRGNHGGKIGEVESIDVTPGS 198
>gi|88603487|ref|YP_503665.1| 30S ribosomal protein S4 [Methanospirillum hungatei JF-1]
gi|121731773|sp|Q2FT37.1|RS4E_METHJ RecName: Full=30S ribosomal protein S4e
gi|88188949|gb|ABD41946.1| SSU ribosomal protein S4E [Methanospirillum hungatei JF-1]
Length = 241
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 14/235 (5%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
HLKR+ +PK W + + F K S GPH ++ LP+++ R+++ +E +L +
Sbjct: 4 HLKRVVSPKSWGIPRKTDKFVTKTSPGPH-NKNALPIVVWARDQMGIVRNMKEAKHVLRE 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
R ++V+ + G D+VSIPK+ +++R+L D KGR I ++ A +
Sbjct: 63 REIIVNGRPVRHPDMGIGIFDIVSIPKSGKHYRILRDKKGRHVTIPIDEDAASS------ 116
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL---ETNKITEFIKFDV 184
+L K+ + + G +N DG + D K+ D+I L L + N+I + F
Sbjct: 117 -RLVKITNKTIVKGGRIQLNLRDGSNV-LTDKQYKSGDSIVLSLKEGQKNEIIDHFPFQP 174
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTIGK 237
GN+ M+ GG++ G VG I GS I ++ G F T V +G+
Sbjct: 175 GNMAMIIGGKHSGVVGRIIEHIPVPGSLPNRVILKDESSGESFETIDEYVVMVGR 229
>gi|397780856|ref|YP_006545329.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
gi|396939358|emb|CCJ36613.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
Length = 244
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 18/242 (7%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ HLKRL AP+ W + K F K + GPH + LP+ + LR + A EV I
Sbjct: 1 MSNHLKRLVAPESWRIPKKVQKFVMKTAPGPHNA-GGLPVGVWLREHIGIAQNASEVRKI 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L QR VLV+ + + G D+VSIPK +++R+ D G I +E AK
Sbjct: 60 LHQRDVLVNGRPCRNPQIGLGVFDIVSIPKLGKHYRIQLDKLGNLISVEIPEESAKT--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK-------IT 177
+LCK+R+ + G +N G I D KA D++ + L K I
Sbjct: 117 ----RLCKIRNKTVIKGGRVQLNLAFGANI-LADNTYKAKDSVVVTLGDPKSGEDRFRII 171
Query: 178 EFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTI 235
+ F GNV M+ GG++ G+VG I + S + + D+ F T +F +
Sbjct: 172 DHFPFAEGNVAMIVGGKHSGKVGRIVEITRTASSVPNRVVLVDDSADERFETIEEYIFMV 231
Query: 236 GK 237
G+
Sbjct: 232 GR 233
>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
Length = 237
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 47/50 (94%)
Query: 168 KLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 217
++DLETNKI +FIKFDV NVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 180 EIDLETNKIMDFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 229
>gi|313125802|ref|YP_004036072.1| 30S ribosomal protein S4e [Halogeometricum borinquense DSM 11551]
gi|448285641|ref|ZP_21476882.1| 30S ribosomal protein S4e [Halogeometricum borinquense DSM 11551]
gi|312292167|gb|ADQ66627.1| SSU ribosomal protein S4E [Halogeometricum borinquense DSM 11551]
gi|445576277|gb|ELY30734.1| 30S ribosomal protein S4e [Halogeometricum borinquense DSM 11551]
Length = 236
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 25/229 (10%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+AP W +++ G F K S+GPH +PL+++LR+ L Y +E
Sbjct: 1 MTRHQKRLSAPNSWPIERKEGTFTVKASAGPH-GEAGVPLLILLRDVLGYVDNKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VLV+ +D+ P G D+++ + E FR+ D GR L I A +
Sbjct: 60 LNQDGVLVNGDAISDEQRPIGMFDILAFTEREEYFRVFPDEGGRLTLTPIDASAADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP----LIKANDTIKLDLETNKITEFI 180
+L KV Q + G + +DG +R + + D++ +D ET +I
Sbjct: 117 ----RLGKVVGKQSVKGGATQLTLHDGSNVRVEEDEEPNQYSSKDSLVIDNETKEIVAHF 172
Query: 181 KFDVGNVVMVTGGRNRGRVGIIKN-------------REKHKGSFETIH 216
++ G +V G + G +G + E G FET+
Sbjct: 173 PYEEGALVTAVDGSHAGEIGTVTEITVTPGSGNNSVTVETEDGEFETVE 221
>gi|345005643|ref|YP_004808496.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
gi|344321269|gb|AEN06123.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
Length = 234
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 9/201 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KRL+ P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MSNHQKRLSVPNSWPVERKENTFTVKADAGPH-GESGVPLLIVLRDVLDYVDSRKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VLV+ D+ P G D+++ P E FR+ GR L I +E +
Sbjct: 60 LNQDAVLVNGDAIADEARPIGMFDILAFPSREEFFRVFPGEGGRLALTPIDEESGSS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFD 183
+L K+ Q G + +DG T + D AND++ +D ET I ++
Sbjct: 117 ----RLGKITGKQQVSGGDFQLTLHDGTTTQVEDASDYSANDSLVVDNETKDIVAHFTYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKN 204
G +V G++ G +G I +
Sbjct: 173 EGALVTAVNGQHAGEIGEIDD 193
>gi|448399322|ref|ZP_21570624.1| 30S ribosomal protein S4e [Haloterrigena limicola JCM 13563]
gi|445669229|gb|ELZ21842.1| 30S ribosomal protein S4e [Haloterrigena limicola JCM 13563]
Length = 232
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 8/207 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH ++ +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDTFTVKAGAGPH-GQDGVPLVVLLRDVLGYVDSRKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ D+ P G D+++ P E +R+ D GR L +I DE+A
Sbjct: 60 LSEDAILVNGDAINDEQRPIGMFDIIAFPGREEYYRVFPDEGGRLALTAI-DEDAA---- 114
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
Q +L K+ Q G + +DG + D D+I +D + I ++
Sbjct: 115 --QSRLGKIEGKQQIPGGDTQLTLHDGTNVLVEDDEYDTRDSIVIDNDDKSIVAHFPYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G I + GS
Sbjct: 173 GALVTAVRGNHGGKIGEIDAIDITPGS 199
>gi|448569082|ref|ZP_21638494.1| 30S ribosomal protein S4e [Haloferax lucentense DSM 14919]
gi|448600499|ref|ZP_21655995.1| 30S ribosomal protein S4e [Haloferax alexandrinus JCM 10717]
gi|445725232|gb|ELZ76857.1| 30S ribosomal protein S4e [Haloferax lucentense DSM 14919]
gi|445735216|gb|ELZ86768.1| 30S ribosomal protein S4e [Haloferax alexandrinus JCM 10717]
Length = 247
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+ PK W +++ G F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPKSWPVERKTGTFTVKAGAGPH-GEEGVPLLIVLRDVLGYVDSKKEAQYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ V +D P G D+++ + E +R+ D GR L I + A +
Sbjct: 60 LNHQSILVNGNVASDVRRPIGMFDILAFVQREEYYRVFPDEGGRLALTPIDADSASS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFD 183
+L K+ S G + +DG T+ D D+I +D ET + ++
Sbjct: 117 ----RLGKIVSKTQVTGGDFQLTLHDGATLVVEDASEYSGKDSIVVDNETKDVVAHFPYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKN-------------REKHKGSFETIH 216
G +V GR+ G +G I E G FET+
Sbjct: 173 EGALVTAVNGRHSGEIGEITEIIVTPGSGNNSVVVETEDGEFETVE 218
>gi|448545974|ref|ZP_21626301.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-646]
gi|448548048|ref|ZP_21627392.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-645]
gi|448557071|ref|ZP_21632506.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-644]
gi|445703320|gb|ELZ55251.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-646]
gi|445714750|gb|ELZ66508.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-645]
gi|445714940|gb|ELZ66697.1| 30S ribosomal protein S4e [Haloferax sp. ATCC BAA-644]
Length = 247
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+ PK W +++ G F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPKSWPVERKTGTFTVKAGAGPH-GEEGVPLLIVLRDVLGYVDSKKEAQYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ V +D P G D+++ + E +R+ D GR L I + A +
Sbjct: 60 LNHQSILVNGNVASDVRRPIGMFDILAFVQREEYYRVFPDEGGRLALTPIDADSASS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFD 183
+L K+ S G + +DG T+ D D+I +D ET + ++
Sbjct: 117 ----RLGKIVSKTQVTGGDFQLTLHDGATLVVEDASEYSGKDSIVVDNETKDVVAHFPYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKN-------------REKHKGSFETIH 216
G +V GR+ G +G I E G FET+
Sbjct: 173 EGALVTAVNGRHSGEIGEITEIIVTPGSGNNSVVVETEDGEFETVE 218
>gi|159145674|gb|ABW90374.1| putative ribosomal protein S4 [Sipunculus nudus]
Length = 67
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%)
Query: 204 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQ 263
+RE+H GSFE +HI+DA+GH FATRL NVF IGKG KPW+SLP+GKG+KL+I EE +R
Sbjct: 3 HRERHPGSFEIVHIRDAVGHSFATRLTNVFIIGKGNKPWISLPRGKGVKLTIAEERDRRI 62
Query: 264 A 264
A
Sbjct: 63 A 63
>gi|435848736|ref|YP_007310986.1| ribosomal protein S4E [Natronococcus occultus SP4]
gi|433675004|gb|AGB39196.1| ribosomal protein S4E [Natronococcus occultus SP4]
Length = 245
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q +LV+ + D+ P G D+V+ P E +R+ D GR L +I + A +
Sbjct: 60 LSQDSILVNGEPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTAIDADAADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+L K+ + G + +DG I D ND+I +D + + ++
Sbjct: 117 ----RLGKIEGKRQVPGGDTQLTLHDGTNILAEDDEYDTNDSIVVDNDDKSVVAHFPYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETI 215
G +V G + G++G + + GS I
Sbjct: 173 GALVTAVRGNHGGKIGEVTEIDVTPGSGSNI 203
>gi|146302888|ref|YP_001190204.1| 30S ribosomal protein S4e [Metallosphaera sedula DSM 5348]
gi|189045355|sp|A4YCX8.1|RS4E_METS5 RecName: Full=30S ribosomal protein S4e
gi|145701138|gb|ABP94280.1| SSU ribosomal protein S4E [Metallosphaera sedula DSM 5348]
Length = 241
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 16/246 (6%)
Query: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQ 67
H+ RL AP K + + S GPH + +PL L+LR+ L + + +E I+
Sbjct: 3 HITRLEAPWFLRASKKEYKWTVRASPGPHPLGKSIPLGLLLRDYLAFTSSLKESKKIISD 62
Query: 68 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQ 127
VLVD +VR D YP G MDV++IP + R++ D + I +EE+K
Sbjct: 63 GKVLVDGRVRRDYKYPVGLMDVIAIPHADLYLRIVPDRARLLKPVKISEEESK------- 115
Query: 128 FKLCKVRSVQFGQKGIPYINTYDGRTI---RYPDPLIKAN--DTIKLDLETNKITEFIKF 182
FKL ++ + + G+ N DGR + + + K T+K+ + +I F
Sbjct: 116 FKLVRLLNKTLVKGGLLQFNLEDGRNLLISKESTEMFKLPTLTTLKISIPNQEILGVYGF 175
Query: 183 DVGNVVMVTGGRNRGRVGIIKNREKHKGS---FETIHIQDALGHEFATRLGNVFTIGKGT 239
VM GG+N G +G +K + + + I+ G E+ T L N IG+
Sbjct: 176 KENVYVMAVGGKNAGIIGQLKRIQTSPYKTRRYSIVVIRSPDGSEYETNLENAMVIGE-E 234
Query: 240 KPWVSL 245
KP V +
Sbjct: 235 KPEVKV 240
>gi|448358816|ref|ZP_21547490.1| 30S ribosomal protein S4e [Natrialba chahannaoensis JCM 10990]
gi|445644496|gb|ELY97509.1| 30S ribosomal protein S4e [Natrialba chahannaoensis JCM 10990]
Length = 232
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ + D+ P G D+++ P E +R+ D GR L I E A +
Sbjct: 60 LSEDSILVNGEPINDEQRPIGIFDIIAFPGREEFYRVFPDEGGRLALTEIDAESADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+L K+ Q G + +DG + + A D+I +D + I ++
Sbjct: 117 ----RLGKIAGKQQIPGGDTQLTLHDGTNVLIDEDDYSAKDSIVVDNDDKSIAAHFPYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKN-------------REKHKGSFETIH 216
G +V G + G++G I E G+FET+
Sbjct: 173 GALVTAVRGNHGGKIGEIAEIEVTQSSGSNIVTVETDDGAFETVE 217
>gi|448583482|ref|ZP_21646838.1| 30S ribosomal protein S4e [Haloferax gibbonsii ATCC 33959]
gi|445729711|gb|ELZ81306.1| 30S ribosomal protein S4e [Haloferax gibbonsii ATCC 33959]
Length = 233
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+ PK W +++ G F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPKSWPVERKTGTFTVKAGAGPH-GEEGVPLLIVLRDVLGYVDSKKEAQYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ V +D P G D+++ + E +R+ D GR L I + A +
Sbjct: 60 LNHQSILVNGDVASDVRRPIGMFDILAFVQREEYYRVFPDEGGRLALTPIDADSASS--- 116
Query: 125 LFQFKLCK-VRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKF 182
+L K V Q G G + +DG T+ D D+I +D ET + +
Sbjct: 117 ----RLGKIVNKTQVG-GGDFQLTLHDGATLIVEDASEYSGKDSIVVDNETKDVVAHFPY 171
Query: 183 DVGNVVMVTGGRNRGRVGIIKN-------------REKHKGSFETIH 216
+ G +V GR+ G +G I E G FET+
Sbjct: 172 EEGALVTAVNGRHSGEIGEITEIIVTPGSGNNSVVVETEDGEFETVE 218
>gi|448565527|ref|ZP_21636394.1| 30S ribosomal protein S4e [Haloferax prahovense DSM 18310]
gi|445715271|gb|ELZ67027.1| 30S ribosomal protein S4e [Haloferax prahovense DSM 18310]
Length = 247
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL+ PK W +++ G F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLSVPKSWPVERKTGTFTVKAGAGPH-GEEGVPLLIVLRDVLGYVDSKKEAQYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ V +D P G D+++ + E +R+ D GR L I + A +
Sbjct: 60 LNHQSILVNGDVASDVRRPIGMFDILAFVQREEYYRVFPDEGGRLALTPIDADSASS--- 116
Query: 125 LFQFKLCK-VRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKF 182
+L K V Q G G + +DG T+ D D+I +D ET + +
Sbjct: 117 ----RLGKIVNKTQVG-GGDFQLTLHDGATLIVEDASEYSGKDSIVVDNETKDVVAHFPY 171
Query: 183 DVGNVVMVTGGRNRGRVGIIKN-------------REKHKGSFETIH 216
+ G +V GR+ G +G I E G FET+
Sbjct: 172 EEGALVTAVNGRHSGEIGEITEIIVTPGSGNNSVVVETEDGEFETVE 218
>gi|448298477|ref|ZP_21488506.1| 30S ribosomal protein S4e [Natronorubrum tibetense GA33]
gi|445591673|gb|ELY45874.1| 30S ribosomal protein S4e [Natronorubrum tibetense GA33]
Length = 234
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH ++ +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKAGAGPH-GKDGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ K D+ P G D+V+ P E +R+ D GR L I E A +
Sbjct: 60 LSEDAILVNGKPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTEIDAEAAGS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP-LIKANDTIKLDLETNKITEFIKFD 183
+L K++ Q G + +DG + D ++D+I +D E I F+
Sbjct: 117 ----RLGKIKGKQQVPGGKTQLTLHDGTNVIVDDENEYNSDDSIVVDNEDKSIVAHFPFE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G I + GS
Sbjct: 173 EGALVTAVRGNHGGKIGEIDAIDITPGS 200
>gi|17380573|sp|Q56230.2|RS4E_THEAC RecName: Full=30S ribosomal protein S4e
Length = 235
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 14/222 (6%)
Query: 27 FAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGF 86
+ P P+ G H + + L+ I+R+ LK + RE IL V VD K +K + GF
Sbjct: 23 WGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGF 82
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
MDV+ I E++R++Y+ +G L E A KL KVRS +
Sbjct: 83 MDVIEI--NGESYRVVYNDQGALVLMKETKERA-------SMKLLKVRSKVIAPGNRIQL 133
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
T+DGRT D K D + + KI+E IK GN +T G + + G I E
Sbjct: 134 GTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIE 193
Query: 207 KHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
+GS +H Q+ F+T +VF IG +V P+
Sbjct: 194 AKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 231
>gi|16082261|ref|NP_394715.1| 30S ribosomal protein S4e [Thermoplasma acidophilum DSM 1728]
gi|1373335|gb|AAB02244.1| ribosomal protein s4e [Thermoplasma acidophilum]
gi|10640605|emb|CAC12383.1| 30S RIBOSOMAL PROTEIN S4E [Thermoplasma acidophilum]
Length = 237
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 14/222 (6%)
Query: 27 FAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGF 86
+ P P+ G H + + L+ I+R+ LK + RE IL V VD K +K + GF
Sbjct: 25 WGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGF 84
Query: 87 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALILLFQFKLCKVRSVQFGQKGIPYI 146
MDV+ I E++R++Y+ +G L E A KL KVRS +
Sbjct: 85 MDVIEI--NGESYRVVYNDQGALVLMKETKERA-------SMKLLKVRSKVIAPGNRIQL 135
Query: 147 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 206
T+DGRT D K D + + KI+E IK GN +T G + + G I E
Sbjct: 136 GTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIE 195
Query: 207 KHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 247
+GS +H Q+ F+T +VF IG +V P+
Sbjct: 196 AKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 233
>gi|448315124|ref|ZP_21504777.1| 30S ribosomal protein S4e [Natronococcus jeotgali DSM 18795]
gi|445612383|gb|ELY66109.1| 30S ribosomal protein S4e [Natronococcus jeotgali DSM 18795]
Length = 236
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH + +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKADAGPH-GEDGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ + D+ P G D+V+ P E +R+ D GR L I E A +
Sbjct: 60 LSEDSILVNGEPINDEQRPIGMFDIVAFPGREEYYRVFPDEGGRLALTEIDAEAADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+L K+ + Q G + +DG + D ND+I +D + I ++
Sbjct: 117 ----RLGKIENKQQVSGGDTQLTLHDGTNVVV-DEEYSTNDSIVVDNDDKSIVAHFPYEE 171
Query: 185 GNVVMVTGGRNRGRVGIIKNREKHKGSFETI 215
G +V G + G++G + + GS I
Sbjct: 172 GALVTAVRGNHGGKIGEVSEIDVTPGSGSNI 202
>gi|433638921|ref|YP_007284681.1| ribosomal protein S4E [Halovivax ruber XH-70]
gi|433290725|gb|AGB16548.1| ribosomal protein S4E [Halovivax ruber XH-70]
Length = 254
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 9/212 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH + +PL+++LR+ L+Y +E
Sbjct: 1 MSNHQKRLSVPKSWPVERKTDTFTVKAGAGPH-GEDGVPLLILLRDVLEYVDNRKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L VLV+ +D+ P G D+++ P E +R+ D GR L I E A++
Sbjct: 60 LANDAVLVNGDEISDEERPIGMFDILAFPDREEAYRVFPDEGGRLSLTPIDAESAES--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLI-KANDTIKLDLETNKITEFIKFD 183
+L KV + G+ ++ +DG + D ND++ +D E+ +I ++
Sbjct: 117 ----RLGKVEGKRQVTGGVTQLSLHDGTNVTVDDEATYGVNDSVVVDNESKEIVAHFPYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 215
+V G + G++G + + GS I
Sbjct: 173 ESALVTAVRGNHAGKIGQVAEIDVTPGSGSNI 204
>gi|448311968|ref|ZP_21501721.1| 30S ribosomal protein S4e [Natronolimnobius innermongolicus JCM
12255]
gi|445603589|gb|ELY57551.1| 30S ribosomal protein S4e [Natronolimnobius innermongolicus JCM
12255]
Length = 237
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDTFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ + D+ P G D+++ P E +R+ D GR L I + A +
Sbjct: 60 LSEDAILVNGEPINDEKRPIGIFDILAFPGREEYYRVFPDEGGRLALTEIDADAADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFD 183
+L K+ Q G + +DG + D +AND+I +D E I ++
Sbjct: 117 ----RLGKIEGKQQVPGGQTQLTLHDGTNVVVDDEAEYEANDSIVVDNEDKSIVAHFPYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G I + GS
Sbjct: 173 EGALVTAIRGNHGGKIGEIDAIDVTPGS 200
>gi|336252428|ref|YP_004595535.1| 30S ribosomal protein S4e [Halopiger xanaduensis SH-6]
gi|335336417|gb|AEH35656.1| 30S ribosomal protein S4e [Halopiger xanaduensis SH-6]
Length = 233
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKTWPVERKTDTFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ + D+ P G D+++ P E +R+ D GR L I E A++
Sbjct: 60 LSEDAILVNGQPINDEQRPIGIFDIIAFPGREEYYRVFPDEGGRLALTEIDAEAAES--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFD 183
+L K+ + Q G + +DG + D +ND+I +D + + ++
Sbjct: 117 ----RLGKIDNKQQVPGGDTQLTLHDGTNVLVEDGAEYSSNDSIVIDNDDKSVVAHFPYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G ++ + GS
Sbjct: 173 EGALVTAIRGNHGGKIGEVETIDVTPGS 200
>gi|448475298|ref|ZP_21603016.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
gi|445816769|gb|EMA66656.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
Length = 241
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLAVPNSWPVERKTNTFTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L VLV+ +D+ P G D+V+ P+ E FR+ D GR L + ++ A +
Sbjct: 60 LNNDSVLVNGDAISDEQRPIGMFDIVAFPERGEFFRVFPDEGGRLALTPVDEDAAGS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFD 183
+L K+ + G + +DG +R D D+I +D E+ ++ +++
Sbjct: 117 ----RLGKITNKAVVPGGDVQLTLHDGTNVRVDADTPYDTKDSIIIDNESKEVVAHFEYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G++ GR+G + + + GS
Sbjct: 173 EGALVTAVAGQHAGRIGEVDDIDVTLGS 200
>gi|146189567|emb|CAM91785.1| hypothetical protein [Platynereis dumerilii]
Length = 53
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN 50
MARG KKHLKRL+APKHWMLDKLGG F P+PSSGPHK RECLPL++ LRN
Sbjct: 1 MARGPKKHLKRLHAPKHWMLDKLGGNFGPRPSSGPHKLRECLPLMVFLRN 50
>gi|289579910|ref|YP_003478376.1| 30S ribosomal protein S4 [Natrialba magadii ATCC 43099]
gi|289529463|gb|ADD03814.1| Ribosomal protein S4E, central domain protein [Natrialba magadii
ATCC 43099]
Length = 235
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 21/225 (9%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTDVFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q +LV+ + D+ P G D+++ P E +R+ D GR L I A +
Sbjct: 60 LSQDSILVNGEPINDEQRPIGIFDIIAFPGREEYYRVFPDEGGRLALTEIDAGSADS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV 184
+L K+ Q G + +DG + + A D+I +D + I ++
Sbjct: 117 ----RLGKIDGKQQISGGDTQLTLHDGTNVLIDEDDYNAKDSIVVDNDDKSIVAHFPYEE 172
Query: 185 GNVVMVTGGRNRGRVGIIKN-------------REKHKGSFETIH 216
G +V G + G++G I + E G+FET+
Sbjct: 173 GALVTAIRGNHGGKIGEIVDIEVTQSSGSNIVTVETDDGAFETVE 217
>gi|222480845|ref|YP_002567082.1| 30S ribosomal protein S4e [Halorubrum lacusprofundi ATCC 49239]
gi|254764559|sp|B9LSR5.1|RS4E_HALLT RecName: Full=30S ribosomal protein S4e
gi|222453747|gb|ACM58012.1| Ribosomal protein S4E, central domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 240
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ +H KRL P W +++ F K +GPH +PL+++LR+ L Y + +E
Sbjct: 1 MTRHQKRLAVPNSWPVERKTNTFTVKAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L VLV+ +D+ P G D+++ P+ E FR+ D GR L S+ +E A +
Sbjct: 60 LNNDSVLVNGDAISDEQRPIGMFDILAFPERGEFFRVFPDEGGRLALTSVDEEAAGS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFD 183
+L K+ + G + +DG + D D+I +D E+ + +++
Sbjct: 117 ----RLGKITNKSVVPGGDAQLTLHDGTNVLVDADTEYDTKDSIVVDNESKDVVAHFEYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G++ GR+G + + + GS
Sbjct: 173 EGALVTAVAGQHAGRIGEVADIDVTLGS 200
>gi|322372156|ref|ZP_08046697.1| 30S ribosomal protein S4e [Haladaptatus paucihalophilus DX253]
gi|320548165|gb|EFW89838.1| 30S ribosomal protein S4e [Haladaptatus paucihalophilus DX253]
Length = 233
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ H KRL+ PK W +++ F K +GPH R+ +PL++I+R+ L YA + +E
Sbjct: 1 MSNHQKRLSVPKSWPVERKTATFTVKAGAGPH-GRDGVPLLIIMRDVLGYAASKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L Q VLV+ + +D+ P G D+++ + E +R+ D GR L I ++ A
Sbjct: 60 LNQDAVLVNGQSVSDEQRPIGMFDILAFTEREEYYRVFPDEGGRLALTPIDEDAADG--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFD 183
+L K+ G +N +DG +R D D+I L E I ++
Sbjct: 117 ----RLAKIEDKTNVPGGETQLNLHDGSNLRVESDSDYNTKDSIVLGNEDKDILAHFPYE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKN 204
G +V G++ G +G + +
Sbjct: 173 EGCLVTAVRGQHAGEIGEVTD 193
>gi|448392349|ref|ZP_21567123.1| 30S ribosomal protein S4e [Haloterrigena salina JCM 13891]
gi|445664439|gb|ELZ17148.1| 30S ribosomal protein S4e [Haloterrigena salina JCM 13891]
Length = 233
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 5 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAI 64
+ KH KRL+ PK W +++ F K +GPH E +PL+++LR+ L Y + +E
Sbjct: 1 MTKHQKRLSVPKSWPVERKTETFTVKAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYA 59
Query: 65 LMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKALIL 124
L + +LV+ + D+ P G D+V+ P E FR+ D GR L I ++ A +
Sbjct: 60 LSEDAILVNGEPINDEKRPIGIFDIVAFPGREEYFRVFPDEGGRLALTEIDEDAAGS--- 116
Query: 125 LFQFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLETNKITEFIKFD 183
+L K+ Q G + +DG + D + D+I +D + I F+
Sbjct: 117 ----RLGKIEGKQQVPGGDTQLTLHDGTNVLVEDGSEYETTDSIVVDNDDKSIVAHFPFE 172
Query: 184 VGNVVMVTGGRNRGRVGIIKNREKHKGS 211
G +V G + G++G I + GS
Sbjct: 173 EGALVTAVRGNHGGKIGEIDAIDITPGS 200
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,234,773,333
Number of Sequences: 23463169
Number of extensions: 173352945
Number of successful extensions: 331216
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 328838
Number of HSP's gapped (non-prelim): 1149
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)