Your job contains 1 sequence.
>024111
MADFRENTQSLRASQAFTELGVNMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEFL
AGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSE
TQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKK
MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRK
TQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024111
(272 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 429 2.6e-40 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 407 5.5e-38 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 383 1.9e-35 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 302 7.5e-29 2
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 311 8.2e-28 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 309 1.3e-27 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 306 2.8e-27 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 308 3.5e-27 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 305 3.5e-27 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 303 5.7e-27 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 304 5.8e-27 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 305 7.1e-27 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 300 1.2e-26 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 295 4.0e-26 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 293 6.6e-26 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 290 1.4e-25 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 288 2.2e-25 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 288 2.2e-25 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 287 2.9e-25 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 282 9.7e-25 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 280 1.6e-24 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 280 1.6e-24 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 279 2.0e-24 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 287 3.3e-24 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 276 4.2e-24 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 257 4.3e-22 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 200 5.4e-16 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 205 6.2e-16 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 199 9.2e-15 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 195 9.7e-15 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 192 9.8e-14 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 189 1.2e-13 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 187 1.4e-12 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 184 2.3e-12 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 179 4.6e-12 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 178 5.5e-12 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 182 8.5e-12 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 178 2.3e-11 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 175 3.8e-11 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 155 5.1e-11 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 171 8.0e-11 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 174 8.4e-11 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 163 2.3e-10 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 163 2.5e-10 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 167 3.7e-10 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 169 3.8e-10 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 147 4.2e-10 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 160 1.2e-09 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 162 1.2e-09 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 156 1.8e-09 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 141 2.0e-09 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 159 3.5e-09 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 155 4.4e-09 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 126 5.2e-09 2
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 158 5.2e-09 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 135 9.7e-09 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 152 1.7e-08 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 148 3.7e-08 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 146 5.9e-08 1
TAIR|locus:2098008 - symbol:PIL2 "phytochrome interacting... 146 9.1e-08 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 138 1.3e-07 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 137 1.4e-07 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 138 1.5e-07 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 144 1.6e-07 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 139 2.0e-07 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 144 2.2e-07 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 143 3.0e-07 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 128 3.3e-07 2
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 141 4.2e-07 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 135 5.2e-07 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 121 5.5e-07 2
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 137 1.0e-06 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 135 1.1e-06 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 130 1.2e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 127 4.4e-06 1
TAIR|locus:2199307 - symbol:AT1G68240 species:3702 "Arabi... 122 5.3e-06 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 123 6.7e-06 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 126 9.3e-06 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 126 9.4e-06 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 128 1.1e-05 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 122 1.6e-05 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 127 1.6e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 121 2.9e-05 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 120 3.6e-05 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 126 4.0e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 122 6.3e-05 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 117 0.00015 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 118 0.00025 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 114 0.00030 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 114 0.00031 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 116 0.00034 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 113 0.00042 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 108 0.00044 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 114 0.00056 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 112 0.00057 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 108 0.00072 1
TAIR|locus:2033015 - symbol:MEE8 "AT1G25310" species:3702... 99 0.00098 1
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 115/259 (44%), Positives = 155/259 (59%)
Query: 27 VKHFAELKPSMLEYFNT--PNFS--LATPLAHQQ-PEFLAGCSYNNSFSNFQTDSRIVVP 81
++ AEL + L +F T P FS L + H Q P+ G S N+F I P
Sbjct: 17 IRQLAELS-NTLHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKSLENNFHQ-----GIFFP 70
Query: 82 RVRTVRGNEDVL--YESSRREVTEQSTSISKTMCS--SASTSETQGDTYKN---KKIRSR 134
++ NE+ +++ +R+ ++ S S+ S + STS Q N K SR
Sbjct: 71 S--NIQNNEESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR 128
Query: 135 RGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
RGK+ S N +EE E ++HVRA+RGQATDSHSIAERVRR KIN++++CLQD+VPGC+K
Sbjct: 129 RGKR-SKNREEEKERE-VVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKT 186
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEI 254
MGMA ML+EIINYV SLQNQVEFLSM+L AA S D N ET++ Q + EA+EM
Sbjct: 187 MGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVEM-- 244
Query: 255 WAKEAYGEYTSFHST-WSL 272
+ G + FHS+ W+L
Sbjct: 245 -GQGRDGS-SVFHSSSWTL 261
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 90/174 (51%), Positives = 116/174 (66%)
Query: 106 TSISKTMCSSASTSETQGDTYKNKKIRS-----RRGKKVSSNEKEEGNPER-IIHVRAKR 159
T K + + S+SET G + I + RRGK++ ++EE ER ++HVRA+R
Sbjct: 90 TKKRKALLPTLSSSETSGVSDNTNVIATETGSLRRGKRLKKKKEEEDEKEREVVHVRARR 149
Query: 160 GQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
GQATDSHS+AERVRR KIN+++RCLQD+VPGC+K MGMA ML+EIINYV SLQNQVEFLS
Sbjct: 150 GQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLS 209
Query: 220 MELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFH-STWSL 272
M+L AA S D N ET++ Q + E +EM ++ FH STWSL
Sbjct: 210 MKLTAASSFYDFNSETDAVDSMQRAKARETVEM---GRQTRDGSPVFHLSTWSL 260
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 80/144 (55%), Positives = 107/144 (74%)
Query: 128 NKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDL 187
+K+ R R ++ + N E P+ ++HVRAKRGQATDSHS+AERVRREKIN++++CLQDL
Sbjct: 77 SKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDL 136
Query: 188 VPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-IETESSRKTQGTNS 246
VPGC+K MGMA ML+ II+YV SLQNQ+EFLSM+L+AA + DLN ++ E + QG N
Sbjct: 137 VPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNI 196
Query: 247 HEALEMEIWAKEAYG-EYTSFHST 269
H A EME +E+ G + +F ST
Sbjct: 197 HSAAEMERILRESVGTQPPNFSST 220
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 302 (111.4 bits), Expect = 7.5e-29, Sum P(2) = 7.5e-29
Identities = 66/119 (55%), Positives = 84/119 (70%)
Query: 136 GKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
G K S+N K P+ IHVRA+RGQATDSHS+AERVRREKI ++M+ LQDLVPGC+K
Sbjct: 283 GNK-SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVT 341
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSMELAAACSSN-DLNIETESSRKTQGTNSHEALEME 253
G A ML+EIINYV SLQ QVEFLSM+L++ + D N++ S+ +S+ L E
Sbjct: 342 GKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEE 400
Score = 42 (19.8 bits), Expect = 7.5e-29, Sum P(2) = 7.5e-29
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 18 TELGVNMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEFL 60
TE EM HF + S N++L P HQ FL
Sbjct: 9 TEFPPPPEMATHFEHQQSSSSAMML--NWALMDPNPHQDSSFL 49
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 78/191 (40%), Positives = 112/191 (58%)
Query: 57 PEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRRE---VTEQSTSISKTMC 113
PE G N F T+++ + + + N D L E E +TEQ+ +K++
Sbjct: 82 PETTLGTG-NFKKRKFDTETKDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIK 140
Query: 114 SSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVR 173
++ + + + N S+ K++ EK + IHVRA+RGQATDSHSIAERVR
Sbjct: 141 KMKHKAKKEENNFSNDS--SKVTKEL---EKTD-----YIHVRARRGQATDSHSIAERVR 190
Query: 174 REKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNI 233
REKI+++M+ LQDLVPGC K G AGML+EIINYV SLQ Q+EFLSM+LA D ++
Sbjct: 191 REKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDM 250
Query: 234 ETESSRKTQGT 244
+ +++ T
Sbjct: 251 DDIFAKEVAST 261
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 69/130 (53%), Positives = 89/130 (68%)
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATD 164
S S ++++ S E+ T K + + K+ S ++KEE IHVRA+RGQAT+
Sbjct: 203 SDSANESVHSKDKGEESSPATTNGGKSKGKGAKETSESQKEE-----YIHVRARRGQATN 257
Query: 165 SHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
SHS+AER+RREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 258 SHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 317
Query: 225 ACSSNDLNIE 234
DLNIE
Sbjct: 318 VNPRLDLNIE 327
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 66/142 (46%), Positives = 94/142 (66%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKV---SSNEKEEGNPERIIH 154
+R + E + +K +G+ KK ++ + K+ S++ EE E IH
Sbjct: 146 KRRLPEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIH 205
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RA+RGQAT+SHS+AERVRREKI+++MR LQ+LVPGC+K G A ML+EIINYV SLQ Q
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 265
Query: 215 VEFLSMELAAACSSNDLNIETE 236
VEFLSM+LA + ++NI+ +
Sbjct: 266 VEFLSMKLATV--NPEINIDID 285
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 308 (113.5 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 72/156 (46%), Positives = 101/156 (64%)
Query: 87 RGNEDVLYESSRREVTEQSTSISKTMCSSASTSE--TQGDTYKN-KKIRSRRGKKVSSNE 143
+G E R+ ++++ +++ S S E GD +N ++ + GKK +S +
Sbjct: 227 KGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGK 286
Query: 144 ---KEEGNPER--IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
K+ +P + IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC+K G A
Sbjct: 287 QQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 346
Query: 199 GMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
ML+EIINYV SLQ QVEFLSM+LA D N+E
Sbjct: 347 VMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLE 382
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 111 TMCSSASTSETQGDTYKNKKIRSRR--GKKVSSNEKEEGNP-ERIIHVRAKRGQATDSHS 167
T+ S+ + + K + S + GK++ N G+P E IHVRA+RGQAT+SHS
Sbjct: 216 TVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNA---GSPKEDYIHVRARRGQATNSHS 272
Query: 168 IAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACS 227
+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA+
Sbjct: 273 LAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNP 332
Query: 228 SNDLNIETESSR---KTQGTNSHEA 249
+ D NIE S+ + +GT + A
Sbjct: 333 TLDFNIERILSKDIFQCRGTTASSA 357
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 62/112 (55%), Positives = 82/112 (73%)
Query: 133 SRRGKKVSSNEKEEGNPER--IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPG 190
S +GK SN + ++ IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPG
Sbjct: 117 SMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 176
Query: 191 CHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQ 242
C+K G AGML+EIINYV SLQ QVEFLSM+L+ + +I+ S+++ Q
Sbjct: 177 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQFQ 228
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 304 (112.1 bits), Expect = 5.8e-27, P = 5.8e-27
Identities = 74/174 (42%), Positives = 105/174 (60%)
Query: 95 ESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIH 154
E SR+ T+ + + SS E + K K G K S + + IH
Sbjct: 202 ELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKD----YIH 257
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A ML+EIINYV SLQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 215 VEFLSMELAAACSSNDLNIETESSRKT-QGTNS--H--EALEMEIWAKEAYGEY 263
VEFLSM+L++ + D N++ S+ +N+ H + L+++ A+ G++
Sbjct: 318 VEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDH 371
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 305 (112.4 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 68/135 (50%), Positives = 90/135 (66%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRA 157
R + TE+S + ++ +++ + KK +GK SS E P+ IHVRA
Sbjct: 226 RCKSTEESNAAAEENSGKGKAAQSNSENGGGKK----QGKDSSSKPPEP--PKDYIHVRA 279
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+RG+ATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEF
Sbjct: 280 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 339
Query: 218 LSMELAAACSSNDLN 232
LSM+LA D N
Sbjct: 340 LSMKLATVNPQLDFN 354
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 69/148 (46%), Positives = 93/148 (62%)
Query: 84 RTVRGNEDVLYESSRREVTEQST--SISKTMCSSASTSETQGDTYKNKK-----IRSRRG 136
+T + L +++ T S+ +S + +T +T+G +N + R+
Sbjct: 59 KTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKEGVEGRKS 118
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
KK KEE P IHVRA+RGQATDSHS+AERVRREKI+++MR LQ+LVPGC K G
Sbjct: 119 KKQKRGSKEEP-PTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTG 177
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAA 224
A ML+EIINYV +LQ QVEFLSM+L +
Sbjct: 178 KALMLDEIINYVQTLQTQVEFLSMKLTS 205
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 70/154 (45%), Positives = 96/154 (62%)
Query: 117 STSETQGDTYKNKKIRSRRGKKV-SSNEKEEGNPER----IIHVRAKRGQATDSHSIAER 171
S E Q +Y + K R R KKV SS +K + + E +HVRA+RGQATD+HS+AER
Sbjct: 143 SMVENQNQSYSSGK-RKEREKKVKSSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAER 201
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDL 231
RREKIN +M+ LQ+LVPGC K G A +L+EIIN+V +LQ QVE LSM LAA D
Sbjct: 202 ARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDF 261
Query: 232 NIET----ESSRKTQGT-NSHEALEMEIWAKEAY 260
N+++ E+ G+ N+ +++ W + Y
Sbjct: 262 NLDSILASENGSLMDGSFNAESYHQLQQWPFDGY 295
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 67/139 (48%), Positives = 92/139 (66%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQG-DTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHV 155
RRE +S I T+ +S ++ Q D + K + + +K++ P + IHV
Sbjct: 77 RREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHV 136
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 216 EFLSMELAAACSSNDLNIE 234
EFLSM+L A S + IE
Sbjct: 197 EFLSMKLEAVNSRMNPGIE 215
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 71/146 (48%), Positives = 94/146 (64%)
Query: 96 SSR-REVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIH 154
SSR + V +Q T +S S + D N+K S+ K S++ + G E +H
Sbjct: 95 SSRIQNVGDQQTEVS----SQQERISMEED---NQKSCSKMQSKEDSSDGD-GTKEDYVH 146
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRGQAT+SHS+AER+RR+KI+++M+ LQDLVPGC K G A ML+EIINYV SLQ Q
Sbjct: 147 VRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 206
Query: 215 VEFLSMELAAACSSNDLNIETESSRK 240
VEFLSM+LA +IE S++
Sbjct: 207 VEFLSMKLATVNPELSFDIEQILSKQ 232
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 59/94 (62%), Positives = 74/94 (78%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S++ G IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC+K G AG
Sbjct: 149 SASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAG 208
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNI 233
ML+EIINYV SLQ QVEFLSM++AA+ + NI
Sbjct: 209 MLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNI 242
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/203 (40%), Positives = 107/203 (52%)
Query: 66 NNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDT 125
+N S DS V RV T + N E S S T +S + E G
Sbjct: 92 SNKSSLLDPDS--VSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSK 149
Query: 126 Y-KNKKI----RSRRG-KKVSS--NEKEEGNPERI----IHVRAKRGQATDSHSIAERVR 173
K K S+ G +K S + K++ P IHVRA+RGQATDSHS+AER R
Sbjct: 150 GGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERAR 209
Query: 174 REKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNI 233
REKI+++M LQDLVPGC++ G A ML+EIINYV SLQ QVEFLSM+LA + N
Sbjct: 210 REKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFN- 268
Query: 234 ETESSRKTQGTNSHEALEMEIWA 256
+S T+ E+L ++A
Sbjct: 269 -ANASLSTEMIQPGESLTQSLYA 290
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 60/102 (58%), Positives = 77/102 (75%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK N K P+ +HVRA+RGQATDSHS+AERVRRE+I+++M+ LQDLVPGC+K
Sbjct: 185 KQGK--GKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNK 242
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
+G A ML+EIINYV SLQ QVEFLSM+LA + N+ T
Sbjct: 243 VIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDFSNLPT 284
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 63/127 (49%), Positives = 83/127 (65%)
Query: 109 SKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSI 168
++T CS E G +GK + + E E HVRA++GQAT++HS+
Sbjct: 132 NETECSKDVNGEVIGPPATAAAGGKSKGK--GAKDAGEAQKEGYSHVRARKGQATNNHSL 189
Query: 169 AERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSS 228
AER+RREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+L+A
Sbjct: 190 AERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFLSMKLSAVNPR 249
Query: 229 NDLNIET 235
DL+IE+
Sbjct: 250 IDLDIES 256
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 62/137 (45%), Positives = 89/137 (64%)
Query: 99 REVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHVRA 157
+++T+ K SS S + + + + S+ G + N P++ IHVRA
Sbjct: 82 QDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQ---NPPPPEPPKQDYIHVRA 138
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ +LQ QVEF
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEF 198
Query: 218 LSMELAAACSSNDLNIE 234
LSM+L A + + IE
Sbjct: 199 LSMKLEAVNAHVNNGIE 215
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 58/103 (56%), Positives = 75/103 (72%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S K S + + + IH+RA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC
Sbjct: 201 SNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCD 260
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
K G A ML+EIINYV SLQ Q+EFLSM+L+A D N+E+
Sbjct: 261 KVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLES 303
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 62/128 (48%), Positives = 82/128 (64%)
Query: 96 SSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-IIH 154
SS E+ E K +C S S G + S G ++ +K + P + IH
Sbjct: 95 SSGNELKESGDKKRK-LCGSES-GNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIH 152
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HS+AER RREKI++KM LQD++PGC+K +G A +L+EIINY+ SLQ Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 215 VEFLSMEL 222
VEFLSM+L
Sbjct: 213 VEFLSMKL 220
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 287 (106.1 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 62/123 (50%), Positives = 84/123 (68%)
Query: 114 SSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVR 173
SS + E G+ + + G+K + + E +HVRAKRGQAT+SHS+AER R
Sbjct: 590 SSLHSQEETGEMPQRELSMEHAGEKAGD---ADASREEYVHVRAKRGQATNSHSLAERFR 646
Query: 174 REKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACS--SNDL 231
REKIN++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+L+ ++DL
Sbjct: 647 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDL 706
Query: 232 NIE 234
+++
Sbjct: 707 DLQ 709
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 58/88 (65%), Positives = 69/88 (78%)
Query: 138 KVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K + E G P IHVRA+RGQATDSHS+AERVRREKI+++M+ LQ LVPGC K G
Sbjct: 162 KKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTG 221
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAA 224
A ML+EII+YV SLQNQVEFLSM+LA+
Sbjct: 222 KALMLDEIISYVQSLQNQVEFLSMKLAS 249
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 55/100 (55%), Positives = 73/100 (73%)
Query: 127 KNKKIRSRRGKKVSSNEKE-EGN---PER----IIHVRAKRGQATDSHSIAERVRREKIN 178
KN +R+ G ++ K + N PE IHVRA+RGQATDSHS+AER RREKI+
Sbjct: 92 KNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 151
Query: 179 KKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ+QVEF+
Sbjct: 152 ERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 200 (75.5 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 47/104 (45%), Positives = 65/104 (62%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDYV 182
Query: 209 HSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEM 252
LQ QV+ LSM +S I ++ + T+S +M
Sbjct: 183 KFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKM 226
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 205 (77.2 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 62/176 (35%), Positives = 98/176 (55%)
Query: 70 SNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNK 129
S+ ++S + RV+T D SS+R +++ + ++ C + + + ++ K
Sbjct: 128 SSVPSNSSANLDRVKTEPAETD----SSQRLISDSAIE-NQIPCPNQNNRNGKRKDFE-K 181
Query: 130 KIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
K +S KK S+E+ E P +HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVP
Sbjct: 182 KGKSST-KKNKSSEENEKLP--YVHVRARRGQATDSHSLAERARREKINARMKLLQELVP 238
Query: 190 GCHKDMGMAGMLEEIINY-VHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGT 244
GC K G ++ + + VH L + +++ L S DL + S + QGT
Sbjct: 239 GCDKGTDFGGKIKIKVCFGVHLLMISGKKVAIFLWKV-SCEDLIDCSFSPPRIQGT 293
Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/95 (38%), Positives = 51/95 (53%)
Query: 180 KMRCLQDLVPGCH----KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
K+ C +DL+ C + G A +L+EIIN+V SLQ QVE LSM LAA D N++T
Sbjct: 274 KVSC-EDLID-CSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDT 331
Query: 236 --ESSRKTQGTNSHEALEMEI-WAKEAYGEYTSFH 267
S + S A M++ W ++A SFH
Sbjct: 332 ILASENGSLMDGSFNAAPMQLAWPQQAIETEQSFH 366
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 199 (75.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 50/92 (54%), Positives = 63/92 (68%)
Query: 147 GNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
GN VRA+RGQATD HSIAER+RREKI+ +M+ LQ+LVP +K A ML+EII+
Sbjct: 306 GNGAPKPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIID 364
Query: 207 YVHSLQNQVEFLSME-LAAACSSNDLNIETES 237
YV LQ QV+ LSM L AA + L ET++
Sbjct: 365 YVKFLQLQVKVLSMSRLGAAEAVVPLLTETQT 396
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 195 (73.7 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 49/104 (47%), Positives = 67/104 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 191
Query: 215 VEFLSME-LAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM L A + L + S K + ++S +IW K
Sbjct: 192 VKVLSMSRLGGAGAVAQLVADIPLSVKGEASDSGG--NQQIWEK 233
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 192 (72.6 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +RA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDYV 190
Query: 209 HSLQNQVEFLSME-LAAACS 227
LQ QV+ LSM L A S
Sbjct: 191 KFLQLQVKVLSMSRLGGAAS 210
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 189 (71.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII YV LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQ 157
Query: 215 VEFLSMELAAACSS 228
V+ LSM S
Sbjct: 158 VKVLSMSRLGGAGS 171
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 187 (70.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 50/148 (33%), Positives = 78/148 (52%)
Query: 74 TDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSI-SKTMCSSASTSETQGDTYKNKKIR 132
TDS V R + V + E+T S+S+ SK S +T D K K+ R
Sbjct: 200 TDSSAVAGGGAYNRKGKAVAMTAPAIEITGTSSSVVSK---SEIEPEKTNVDDRKRKE-R 255
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
+ + EE R+ KR +A + H+++ER RR++IN++M+ LQ+L+P C+
Sbjct: 256 EATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCN 315
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSM 220
K A ML+E I Y+ SLQ Q++ +SM
Sbjct: 316 KS-DKASMLDEAIEYMKSLQLQIQMMSM 342
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 184 (69.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 42/70 (60%), Positives = 52/70 (74%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATD HSIAER+RREKI+++M+ LQ LVP +K A ML+EII+YV LQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 298
Query: 216 EFLSMELAAA 225
+ LSM A
Sbjct: 299 KVLSMSRLGA 308
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 179 (68.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 205 VKVLSM 210
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 178 (67.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 202
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 203 VKVLSM 208
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 182 (69.1 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 42/122 (34%), Positives = 68/122 (55%)
Query: 99 REVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAK 158
+EV ++ S + + A T Q + KI + K+ + + +G E K
Sbjct: 296 KEVATETAGTSYSGVNKAETERVQIQPERETKITEDK-KREETIAEIQGTEEAHGSTSRK 354
Query: 159 RGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
R +A D H+++ER RRE+IN++M+ LQ+L+P C K MLE++I YV SLQ Q++ +
Sbjct: 355 RSRAADMHNLSERRRRERINERMKTLQELLPRCRKT-DKVSMLEDVIEYVKSLQLQIQMM 413
Query: 219 SM 220
SM
Sbjct: 414 SM 415
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 178 (67.7 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 39/64 (60%), Positives = 50/64 (78%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM--GMAGMLEEIINYVHSLQ 212
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K M A ML+EII+YV LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 213 NQVE 216
QV+
Sbjct: 310 LQVK 313
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 175 (66.7 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 48/139 (34%), Positives = 73/139 (52%)
Query: 88 GNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEG 147
G LY +S + + + TS + CS GD I +S+N +E
Sbjct: 160 GRSTELYFASSSKFS-RGTSRDLSCCS---LKRKYGD------IEEEESTYLSNNSDDES 209
Query: 148 NPERI-IHVRA-----KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
+ + +H R KR ++T+ H + ER RR++ NKKMR LQDL+P C+KD A +L
Sbjct: 210 DDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKD-DKASLL 268
Query: 202 EEIINYVHSLQNQVEFLSM 220
+E I Y+ +LQ QV+ +SM
Sbjct: 269 DEAIKYMRTLQLQVQMMSM 287
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 155 (59.6 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 215 VEFLSMELA-AACSS 228
V+ L+ A CS+
Sbjct: 129 VKGLNDSRANCTCSA 143
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 171 (65.3 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 67/251 (26%), Positives = 116/251 (46%)
Query: 1 MADFRENTQSLRASQAFTELGVNMEMVKHFAELKP--SMLEYFNTPNFSLATPLAHQQPE 58
M D NT S + +E V E L P +++E + L + ++ +
Sbjct: 108 MEDVTINTNSYLVGEETSECDV--EKYSSGKTLMPLETVVENHDDEESLLQSEISVTTTK 165
Query: 59 FLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTM---CSS 115
L G + ++ + R V + + N ++ +++ E E T + K S
Sbjct: 166 SLTGSKKRSRATSTDKNKRARVNK--RAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMS 223
Query: 116 ASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHV----RAKRGQATDSHSIAER 171
S T T + + G S+ KE+ +P + +++ RA RG ATD S+ R
Sbjct: 224 RQNSSTTFCTEEESNCADQDGGGEDSSSKED-DPSKALNLNGKTRASRGAATDPQSLYAR 282
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME---LAAACSS 228
RRE+IN+++R LQ+LVP K + ++ MLEE ++YV LQ Q++ LS + + A +
Sbjct: 283 KRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAF 341
Query: 229 NDLNIETESSR 239
N ++I S R
Sbjct: 342 NGMDIGLSSPR 352
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 174 (66.3 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 35/81 (43%), Positives = 57/81 (70%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S + ++E P R + +KR ++ + H+++ER RR++IN+KMR LQ+L+P C+K + A
Sbjct: 323 SGDGRKEAGPSRT-GLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKAS 380
Query: 200 MLEEIINYVHSLQNQVEFLSM 220
ML+E I Y+ SLQ QV+ +SM
Sbjct: 381 MLDEAIEYLKSLQLQVQIMSM 401
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 163 (62.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV +LQ+Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 215 VEFLS 219
++ L+
Sbjct: 241 IQELT 245
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 163 (62.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 86 VRGNEDVLYESSRREVT---EQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN 142
++ N D Y S +V+ ++S + S TS+ +G+ + ++ + N
Sbjct: 115 IQANYD--YLSGNIDVSPGSKRSREMEALFSSPEFTSQMKGEQ-SSGQVPTGVSSMSDMN 171
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+ VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLE
Sbjct: 172 MENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLE 231
Query: 203 EIINYVHSLQNQVEFLSME 221
E + YV LQ Q++ L+ E
Sbjct: 232 EAVEYVKVLQRQIQELTEE 250
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 167 (63.8 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 112 MCSSASTSETQGDTYKNKKIRSRRGKKV--SSNEKEEGNPERIIHVRAKRGQATDSHSIA 169
+C A T Q I R +K +N + +G E +KR +A H ++
Sbjct: 227 LCK-AETEPVQRQPATETDITDERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLS 285
Query: 170 ERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
ER RR+KIN+ M+ LQ+L+P C K + ML+++I YV SLQ+Q++ SM
Sbjct: 286 ERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQMFSM 335
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 169 (64.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 40/131 (30%), Positives = 76/131 (58%)
Query: 93 LYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPE-- 150
++++ R+ E + + S ++CS + + +K +++ S ++ + P
Sbjct: 242 VHKTEARKAPEATVATS-SVCSGNGAGSDELWRQQKRKCQAQAECSASQDDDLDDEPGVL 300
Query: 151 RIIHVRA-KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
R R+ KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+
Sbjct: 301 RKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLK 359
Query: 210 SLQNQVEFLSM 220
+LQ QV+ +SM
Sbjct: 360 TLQLQVQMMSM 370
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 147 (56.8 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 44
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 160 (61.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 35/89 (39%), Positives = 56/89 (62%)
Query: 131 IRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPG 190
I R ++ E+ G+ R KR +A + H++AER RREKIN++M+ LQ L+P
Sbjct: 126 IAPRSAPRIQGTEEARGSTSR------KRSRAAEMHNLAERRRREKINERMKTLQQLIPR 179
Query: 191 CHKDMGMAGMLEEIINYVHSLQNQV-EFL 218
C+K ++ MLE++I YV SL+ Q+ +F+
Sbjct: 180 CNKSTKVS-MLEDVIEYVKSLEMQINQFM 207
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 38/75 (50%), Positives = 46/75 (61%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQDLVP A ML+ + Y+ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 215 VEFLSMELAAA-CSS 228
V+ L A CSS
Sbjct: 364 VKALEESRARCRCSS 378
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 156 (60.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 46/134 (34%), Positives = 76/134 (56%)
Query: 90 EDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVS-SNEKEEGN 148
E++ +S +VT Q + SK +S S T ++ N G+ +S S++ E+ +
Sbjct: 104 ENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWV----DGQSLSNSSDDEKAS 159
Query: 149 PERII-HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINY 207
+ RA +G ATD S+ R RREKIN++++ LQ+LVP K + ++ MLEE ++Y
Sbjct: 160 VTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHY 218
Query: 208 VHSLQNQVEFLSME 221
V LQ Q++ LS +
Sbjct: 219 VKFLQLQIKLLSSD 232
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 141 (54.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 36/78 (46%), Positives = 46/78 (58%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-----IET 235
M L++LVPGC K G A +L+EIIN+V SLQ QVE+LSM LAA D + T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTT 60
Query: 236 ESSRKTQGTNSHEALEME 253
E R T G N +++E
Sbjct: 61 ECGRIT-GLNYKNGMDLE 77
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 159 (61.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 46/148 (31%), Positives = 77/148 (52%)
Query: 76 SRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSR- 134
S VV ++D+ + R E E+ + AS+S G + + R
Sbjct: 141 SNAVVAPALPADDDDDIDAAAPREEEEEEEEGPGAARAAGASSSGGSGSGSGSYPLFKRG 200
Query: 135 RGKKVSSNEK--EEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
R + V S + +E P + + +R +A + H+++ER RR++IN+K+R LQ+LVP C+
Sbjct: 201 REELVDSLSEVADETRPSKRPAAK-RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCN 259
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSM 220
K A +L+E I Y+ SLQ QV+ + M
Sbjct: 260 KT-DKASILDEAIEYLKSLQMQVQIMWM 286
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 155 (59.6 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 35/89 (39%), Positives = 53/89 (59%)
Query: 132 RSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGC 191
R + + S+E E+ P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P
Sbjct: 5 RCESEEALGSSESEQ--PTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNS 62
Query: 192 HKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
K A ML++ I Y+ LQ QV+ LSM
Sbjct: 63 SKT-DKASMLDDAIEYLKQLQLQVQMLSM 90
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 126 (49.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME-LAAACSSND 230
+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV+ LSM L A +
Sbjct: 251 LRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAP 309
Query: 231 L--NIETESSRKTQGTNS 246
L N+ +ES+ T+S
Sbjct: 310 LVANMSSESNGNGNATSS 327
Score = 75 (31.5 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 156 RAKRGQATDSHSIAERV 172
RA+RGQATD HSIAERV
Sbjct: 213 RARRGQATDPHSIAERV 229
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 158 (60.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 130 KIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
+I+ K+ + E+ G E KR + + H++AER RREKIN+KM+ LQ L+P
Sbjct: 224 QIQPATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIP 283
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVE 216
C+K ++ L++ I YV SLQ+Q++
Sbjct: 284 RCNKSTKVS-TLDDAIEYVKSLQSQIQ 309
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 135 (52.6 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 26/63 (41%), Positives = 44/63 (69%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R ++ + H+ +ER RR++IN+K++ LQ+L+P C K ML+E I+Y+ SLQ Q++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQM 68
Query: 218 LSM 220
L M
Sbjct: 69 LVM 71
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 152 (58.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 215 VEFLSMELAAACSSNDLNIETES 237
+ L+ + A C +N E +S
Sbjct: 339 YKILN-DNRANCKC--MNKEKKS 358
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 148 (57.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR KIN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 157
Query: 217 FLSMELAAACSSNDLNIETESSRKTQ 242
LSM + + L+ E ++ +Q
Sbjct: 158 MLSMRNGVYLNPSYLSGALEPAQASQ 183
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA RG ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE ++YV LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 275
Query: 216 EFLS---MELAAACSSNDLNI 233
+ LS M + A + N +NI
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNI 296
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 146 (56.5 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 38/120 (31%), Positives = 63/120 (52%)
Query: 101 VTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRG 160
V ++S + S T +++G Y + + S++ P R KR
Sbjct: 134 VADRSFKLGFDTSSVGFTEDSEGSMYLSSSLDDE------SDDARPQVPARTRKALVKRK 187
Query: 161 QATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
+ ++++ ER +R INKKMR LQ+L+P HKD + ML+E INY+ +LQ QV+ ++M
Sbjct: 188 RNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNES-MLDEAINYMTNLQLQVQMMTM 246
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 138 (53.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQ LVP K + ML+ ++++ LQ+Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 215 VEFLSMELA-AACS 227
++ L + CS
Sbjct: 194 LQTLKEDKEKCTCS 207
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 137 (53.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/130 (33%), Positives = 70/130 (53%)
Query: 96 SSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHV 155
S+ R S + ++A S ++G Y +R+G + + E+EE R
Sbjct: 62 STSRAQAAPSAPLHPVAATAAVQSSSRGIMYTT----TRQGV-IDAAEEEEAAAPRPRRR 116
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
A+ +++ S+A R+RRE+++++MR LQ LVPG + + A MLEE I YV L+ V
Sbjct: 117 NAR--VSSEPQSVAARLRRERVSQRMRALQRLVPGGAR-LDTASMLEEAIRYVKFLKGHV 173
Query: 216 EFLSMELAAA 225
+ S+E AAA
Sbjct: 174 Q--SLERAAA 181
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 138 (53.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/153 (29%), Positives = 80/153 (52%)
Query: 84 RTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNE 143
R V +D+L +++++ +S +++ +A +Y + G VS+
Sbjct: 69 RNVDSRQDLLKPRKKQKLSSESNLVTEP--KTAWRDGQSLSSYNSSDDEKALGL-VSNTS 125
Query: 144 KEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEE 203
K + +R +A RG A+D S+ R RRE+IN +++ LQ LVP K + ++ MLE+
Sbjct: 126 K---SLKR--KAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLED 179
Query: 204 IINYVHSLQNQVEFLSME---LAAACSSNDLNI 233
++YV LQ Q++ LS E + A + N LN+
Sbjct: 180 AVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNM 212
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 144 (55.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 37/116 (31%), Positives = 60/116 (51%)
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATD 164
++S ++ SS S + D Y S G + +E +KR +A +
Sbjct: 144 NSSGTRVSSSSVGASGNETDEYD---CESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAE 200
Query: 165 SHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
H+++E+ RR +IN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+ L+M
Sbjct: 201 VHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 139 (54.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
+TD S+A R+RRE+I++++R LQ LVPG K M A ML+E I+YV L+ QV+ S+E
Sbjct: 158 STDPQSVAARMRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLE 214
Query: 222 LAAACSSN 229
AAA + +
Sbjct: 215 RAAAANGH 222
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 144 (55.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 37/104 (35%), Positives = 64/104 (61%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
K K+I + + VS ++ GN +R +A + H+++ER RR++IN++M+ LQ+
Sbjct: 225 KRKRI-NHTDESVSLSDAI-GNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQE 282
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME--LAAACSS 228
L+P C K A +L+E I+Y+ SLQ Q++ + M +AAA +S
Sbjct: 283 LIPHCSKT-DKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAAS 325
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 143 (55.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 31/91 (34%), Positives = 59/91 (64%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S++++ GN +R +A + H+++ER RR++IN++M+ LQ+L+P C + A
Sbjct: 235 STDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKAS 293
Query: 200 MLEEIINYVHSLQNQVEFLSME--LAAACSS 228
+L+E I+Y+ SLQ Q++ + M +AAA ++
Sbjct: 294 ILDEAIDYLKSLQMQLQVMWMGSGMAAAAAA 324
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 128 (50.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 34/83 (40%), Positives = 53/83 (63%)
Query: 156 RAKRGQ--ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
+A+ G ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE ++YV LQ
Sbjct: 220 KAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQL 278
Query: 214 QVEFLS---MELAAACSSNDLNI 233
Q++ LS M + A + N +NI
Sbjct: 279 QIKLLSSDEMWMYAPIAYNGMNI 301
Score = 49 (22.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 129 KKIRSRRGKKVSSNEKEEGN 148
KK S+RGKK + E E+G+
Sbjct: 168 KKAGSKRGKKAAQCEGEDGS 187
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 141 (54.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 40/121 (33%), Positives = 59/121 (48%)
Query: 99 REVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAK 158
+ +T + + T S S T D + + R + EK+ G V K
Sbjct: 157 QRLTMDTYDVGFTSTSMGSHDNTIDD---HDSVCHSRPQMEDEEEKKAGGKSS---VSTK 210
Query: 159 RGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
R +A H+ +ER RR+KIN++M+ LQ LVP K A ML+E+I Y+ LQ QV +
Sbjct: 211 RSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVSMM 269
Query: 219 S 219
S
Sbjct: 270 S 270
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 135 (52.6 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 35/90 (38%), Positives = 59/90 (65%)
Query: 139 VSSNEKEEGNPERIIHVRAKRGQAT-DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGM 197
+++ + E +PE + + + + + D S+A R+RRE+I++++R LQ LVPG K M
Sbjct: 124 IAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVPGGTK-MDT 182
Query: 198 AGMLEEIINYVHSLQNQVEFLSMELAAACS 227
A ML+E I+YV L++QV+ S+E AAA +
Sbjct: 183 ASMLDEAIHYVKFLKSQVQ--SLERAAAAT 210
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 121 (47.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
+TD ++A R RRE+I++K+R LQ LVPG K M A ML+E NY+ L+ QV+ L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKAL 331
Score = 58 (25.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 95 ESSRREVTEQSTS------ISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN 142
ES RE+T ++T+ + + T+ET T K K ++ RG + S+
Sbjct: 129 ESENREITTETTTTIKPKPLKRNRGGDGGTTETTTTTTKPKSLKRNRGDETGSH 182
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQDLVP K + ML+ + ++ LQ+Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 215 VEFLSME 221
++ L +
Sbjct: 343 LQNLKKD 349
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 51/167 (30%), Positives = 83/167 (49%)
Query: 59 FLAGCSYNNSFSNF--QTDSRIVVPR-VRTVRGNEDVLYESSRREVT-EQSTSISKTMCS 114
FL G + + F+N+ Q I+ PR T +G +D LY S T ++ S+S
Sbjct: 111 FLEGNNMSYGFTNWNHQHHMDIISPRSTETPQGQKDWLYSDSTVVTTGSRNESLSPKSAG 170
Query: 115 SASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRR 174
+ S T T +KK+ S G + K +P+ D S+A + RR
Sbjct: 171 N-KRSHTGESTQPSKKLSS--GVTGKTKPKPTTSPK-------------DPQSLAAKNRR 214
Query: 175 EKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
E+I+++++ LQ+LVP K + + MLE+ I+YV LQ QV+ L+ +
Sbjct: 215 ERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLATD 260
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 130 (50.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/128 (32%), Positives = 61/128 (47%)
Query: 97 SRREVTEQSTSISKTMCSSAST--SETQGDTYKNKKIR-SRRGK-KVSSNEKEEGNPERI 152
SR + S+ T SSA T G + S G+ K + K G +R
Sbjct: 28 SRTPTAQPSSPPKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQDKYAFEHKRSGAKQRN 87
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
KR H+++E+ RR KIN+KM+ LQ L+P +K A ML+E I Y+ LQ
Sbjct: 88 ---SLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQ 143
Query: 213 NQVEFLSM 220
QV+ L++
Sbjct: 144 LQVQTLAV 151
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 127 (49.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 37/107 (34%), Positives = 60/107 (56%)
Query: 115 SASTSETQGDTYKNKKIRSRRGK--KVSSNEKEEGNPERIIHVRAKRGQAT-DSHSIAER 171
S+S E +G N + + R +++ + +PE + + K + + D S+A R
Sbjct: 76 SSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAAR 135
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
RRE+I++++R LQ LVPG K M A ML+E I+YV L+ QV+ L
Sbjct: 136 HRRERISERIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQSL 181
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 122 (48.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 138 KVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPG-CHKDMG 196
K + +EK + P+ + AKR ++ + + E+ RR++I K+ LQ L+P C K
Sbjct: 44 KNNDHEKHDEEPDEESYRMAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKP-D 102
Query: 197 MAGMLEEIINYVHSLQNQVEFLSM 220
+A LE II Y+ SL+ QV+ +SM
Sbjct: 103 LASKLENIIEYIKSLKYQVDVMSM 126
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 123 (48.4 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 94 YESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERII 153
Y++ E ST++ + S + +K++ ++ +N +E + +
Sbjct: 46 YDTMTTEFVNSSTNVCFDYQDDSFVSAEETTIGNKRKVQMDTENELMTNRSKEVRTKMSV 105
Query: 154 HVRAKRG-QATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
K A S S + RR++IN+++R LQ+L+P K + ++ MLEE I YV L
Sbjct: 106 SKACKHSVSAESSQSYYAKNRRQRINERLRILQELIPNGTK-VDISTMLEEAIQYVKFLH 164
Query: 213 NQVEFLSME 221
Q++ LS +
Sbjct: 165 LQIKLLSSD 173
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 126 (49.4 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 29/87 (33%), Positives = 50/87 (57%)
Query: 131 IRSRRGKKVSSNEKEEGNPERIIHVRAKRGQA-TDSHSIAERVRREKINKKMRCLQDLVP 189
+ + KK+ + +E R+ H +A+R ++H + E+ RR +IN+K + LQ LVP
Sbjct: 125 LTEKMDKKLPTRTEER---RRVKH-KARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVP 180
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVE 216
GC K + L+ I+Y+ SLQ Q++
Sbjct: 181 GCDK-CSQSSTLDRTIHYMKSLQQQLQ 206
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 126 (49.4 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 36/108 (33%), Positives = 54/108 (50%)
Query: 112 MCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAER 171
M + AS + + + + R ++ KK SS G R H A +H++ E+
Sbjct: 43 MPAVASPTMNKDEASDDSGERKKKKKKASS---AAGKASRHRH-------AAGAHNLTEK 92
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
RR KI ++ R LQ LVPGC A L++ I Y+ SLQ+Q+E S
Sbjct: 93 RRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEATS 140
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/131 (27%), Positives = 72/131 (54%)
Query: 101 VTEQSTSISKTMCSSASTSETQGDTYKN-KKIRSRR-G-----KKVSSNEKEEGNPERII 153
V E+S + ++ +SAS + ++++ + +++ R G + S + EG+ +
Sbjct: 95 VQEESHRVGHSVTASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETR 154
Query: 154 ----HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
+RG+A H+ +ER RR++IN++MR LQ L+P K +L+++I ++
Sbjct: 155 GEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASK-ADKVSILDDVIEHLK 213
Query: 210 SLQNQVEFLSM 220
LQ QV+F+S+
Sbjct: 214 QLQAQVQFMSL 224
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 122 (48.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/118 (27%), Positives = 65/118 (55%)
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGK--KVSSNEKEEGNPERIIHVRAKRGQA 162
S+S++ T S + + + +++ + + K+++ + + +P + + + +
Sbjct: 66 SSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRI 125
Query: 163 TDS-HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
+D S+A R RRE+I++++R LQ LVPG K M A ML+E I YV L+ Q+ L+
Sbjct: 126 SDDPQSVAARHRRERISERIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLLN 182
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/128 (32%), Positives = 61/128 (47%)
Query: 95 ESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEK--EEGNPERI 152
E + E + S + TM + TS+ G+ K KK S GK ++ + P R
Sbjct: 154 EKKQMEKMPAAASPTTTM-NKDETSDDSGER-KKKKASSAAGKSKQASPRGCRSSQPYR- 210
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
K G + D RR KI ++ R LQ LVPGC K A L++ I Y+ SLQ
Sbjct: 211 -----KSGDSIDELFTKFHRRRFKITERFRTLQRLVPGCDKS-NQASTLDQTIQYMKSLQ 264
Query: 213 NQVEFLSM 220
+Q++ +S+
Sbjct: 265 HQLKAMSV 272
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 121 (47.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 41/151 (27%), Positives = 80/151 (52%)
Query: 91 DVLYESSRREVTEQSTSISKTMCSSASTS--ETQGDTYKNKKIRSRRGKKVSSNEKEEGN 148
D +E +++ ++ T S+++ SS++ + ET + N S S +G+
Sbjct: 89 DEHFEQQQKK-PKKKTRTSRSVSSSSTITDYETSSELV-NPSCSSGSSVGEDSIAATDGS 146
Query: 149 P--ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
++ + R + + D+ S+ + RRE+IN+++R LQ LVP K + ++ MLEE +
Sbjct: 147 VVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQ 205
Query: 207 YVHSLQNQVEFLSME---LAAACSSNDLNIE 234
YV LQ Q++ LS + + A + N +N++
Sbjct: 206 YVKFLQLQIKLLSSDDTWMFAPLAYNGMNMD 236
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 59/197 (29%), Positives = 95/197 (48%)
Query: 24 MEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEFLAGCSYNNSFSNFQTDSRIV-VPR 82
M M+ H E P E+ N PN S +P + FL +N++ ++Q+D + P
Sbjct: 6 MNMMMHQMEKLP---EFCN-PNSSFFSPDHNNTYPFL----FNST--HYQSDHSMTNEPG 55
Query: 83 VRTVRGNEDVLYESSRREVTEQSTS-ISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSS 141
R G+ + SS T S+ + K S+ + + T + R + +
Sbjct: 56 FRY--GSGLLTNPSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHI 113
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
+ + P+R +VR + D S+A R RRE+I++++R LQ LVPG K M A ML
Sbjct: 114 DPEAVKPPKRR-NVRISK----DPQSVAARHRRERISERIRILQRLVPGGTK-MDTASML 167
Query: 202 EEIINYVHSLQNQVEFL 218
+E I+YV L+ QV+ L
Sbjct: 168 DEAIHYVKFLKKQVQSL 184
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 88 GNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEG 147
GN++++ + V E + + + D N+ R G S +E
Sbjct: 240 GNKEMMGMNPFNTVEEDGIPVIGEPSLLVNEQQVVNDKDMNENGRVDSGSDCSDQIDDED 299
Query: 148 NPERIIHVRAKRGQATDSHSI-AERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
+P+ + K G+ + + ++ AER RR+K+N ++ L+ LVP K + A +L + IN
Sbjct: 300 DPK----YKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITK-LDRASILGDAIN 354
Query: 207 YVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGT 244
YV LQN+ + L EL + D + + GT
Sbjct: 355 YVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNGT 392
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 122 (48.0 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
++D ++A R+RRE+++ ++R LQ LVPG +K M A ML+E +Y+ L++QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNK-MDTASMLDEAASYLKFLKSQVQKLET- 339
Query: 222 LAAACSSNDLNIETESSRKTQGTNSH 247
L +++ L + S N H
Sbjct: 340 LGTTTTTSKLPQQYYSGNINSSNNHH 365
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
V A+R AT + S+ R RRE+IN ++R LQ LVP K + ++ MLEE ++YV LQ Q
Sbjct: 210 VPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQLQ 268
Query: 215 VEFLSMELAAACSSNDLN 232
++ +E+ C L+
Sbjct: 269 IK---VEVQIVCHDQMLS 283
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 31/87 (35%), Positives = 51/87 (58%)
Query: 132 RSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGC 191
R+ + V+ ++ G R +VR ++D ++A R RRE+I++++R LQ LVPG
Sbjct: 345 RAAAMRPVTLGAEDAGERPRRRNVRI----SSDPQTVAARQRRERISERLRVLQKLVPGG 400
Query: 192 HKDMGMAGMLEEIINYVHSLQNQVEFL 218
K M A ML+E NY+ L++Q+ L
Sbjct: 401 AK-MDTASMLDEAANYLRFLKSQIREL 426
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 167 SIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
S A +VRRE+I+++++ LQDLVP K + + MLE+ INYV LQ QV+ L+ +
Sbjct: 210 SAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLATD 263
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 30/94 (31%), Positives = 55/94 (58%)
Query: 129 KKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQAT-DSHSIAERVRREKINKKMRCLQDL 187
K+ + + +S ++K+ G + ++ T D S+A + RRE+I++++R LQ+L
Sbjct: 170 KRAHAESSQAMSPSKKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQEL 229
Query: 188 VPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
VP K + + MLE+ I+YV LQ QV+ L+ +
Sbjct: 230 VPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 262
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 43/204 (21%), Positives = 83/204 (40%)
Query: 45 NFSLATPLAHQQPEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQ 104
N+ A L NN + I+ R + + + + T Q
Sbjct: 142 NYERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQNR-NFINRVKSIFGSGKTTKHTNQ 200
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATD 164
+ S K S S S Q + K+ R +V++ KE+ +P + HV A
Sbjct: 201 TGSYPKPAVSDHSKSGNQQFGSERKRRRKLETTRVAAATKEKHHPAVLSHVEA------- 253
Query: 165 SHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
E+ RREK+N + L+ +VP + M A +L + ++Y+ SL+++++ L E+
Sbjct: 254 -----EKQRREKLNHRFYALRAIVPKVSR-MDKASLLSDAVSYIESLKSKIDDLETEIKK 307
Query: 225 ACSSNDLNIETESSRKTQGTNSHE 248
+ ++ SS + + ++
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQ 331
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 51/194 (26%), Positives = 94/194 (48%)
Query: 40 YFNTPNF-SLATPLAHQQ--PEFLAGCSYN-NSFSNFQTDSRIVVPRV-RTVRGNEDVL- 93
+F N SL +P+ + P SY+ + +S+ Q DS + PRV +T E
Sbjct: 76 FFTFDNHRSLISPVTNGGAFPVVDGNMSYSYDGWSHHQVDS--ISPRVIKTPNSFETTSS 133
Query: 94 YESSRREVTEQSTSISK-TMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERI 152
+ + +++ +T+ S ST G +++ + K+ + E + + +
Sbjct: 134 FGLTSNSMSKPATNHGNGDWLYSGSTIVNIGSRHESTSPKLAGNKRPFTGENTQLSKKPS 193
Query: 153 IHVRAK-RGQAT----DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINY 207
K + +AT D S+A + RRE+I+++++ LQ+LVP K + + MLE+ I Y
Sbjct: 194 SGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGY 252
Query: 208 VHSLQNQVEFLSME 221
V LQ QV+ L+ +
Sbjct: 253 VKFLQVQVKVLAAD 266
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 108 (43.1 bits), Expect = 0.00044, P = 0.00044
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
RR++IN+KM+ LQ LVP K A ML+E+I+Y+ LQ QV+ +S
Sbjct: 13 RRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIDYLKQLQAQVQVMS 58
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 24/57 (42%), Positives = 41/57 (71%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
++D ++A R+RRE++++++R LQ LVPG K M A ML+E +Y+ L++Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 359
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 112 (44.5 bits), Expect = 0.00057, P = 0.00057
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 124 DTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRC 183
+ Y + S+R + SSN N R K HS+ E+ RR KIN++ +
Sbjct: 11 EDYGEEDFNSKR-EGPSSNTTVHSN--RDSKENDKASAIRSKHSVTEQRRRSKINERFQI 67
Query: 184 LQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
L++L+P + A L E+I+YV LQ +V+
Sbjct: 68 LRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 108 (43.1 bits), Expect = 0.00072, P = 0.00072
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
+TD S+A R RR +I+ + R L+ LVPG K M MLE+ I+YV L+ Q+
Sbjct: 53 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKTQI 105
>TAIR|locus:2033015 [details] [associations]
symbol:MEE8 "AT1G25310" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 Gene3D:4.10.280.10 EMBL:AC079374
IPI:IPI00520631 RefSeq:NP_173902.1 UniGene:At.51765
ProteinModelPortal:Q9FRI0 SMR:Q9FRI0 EnsemblPlants:AT1G25310.1
GeneID:839115 KEGG:ath:AT1G25310 TAIR:At1g25310
Genevestigator:Q9FRI0 Uniprot:Q9FRI0
Length = 145
Score = 99 (39.9 bits), Expect = 0.00098, P = 0.00098
Identities = 24/101 (23%), Positives = 53/101 (52%)
Query: 115 SASTSETQGDTYK--NKKIRSRRGKKVSSNEKEEGNPERI-IHVRAKRGQATDSHSIAER 171
S + E D + N+K + G+K S+ + EG +R+ K +D ++ ++
Sbjct: 17 SLTNPEANSDLRRINNEKGVEKVGQKRSAESRREGKKKRVKTQCVIKSSDKSDHDTLLKK 76
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
RRE+I +++ L+++ P C + + +L+ +I Y ++L+
Sbjct: 77 KRRERIRRQLETLKEITPNCPQS-DINAILDCVIEYTNNLR 116
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.124 0.348 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 272 272 0.00099 114 3 11 23 0.40 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 608 (65 KB)
Total size of DFA: 197 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.25u 0.10s 27.35t Elapsed: 00:00:01
Total cpu time: 27.26u 0.10s 27.36t Elapsed: 00:00:01
Start: Sat May 11 11:20:34 2013 End: Sat May 11 11:20:35 2013