BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024111
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/274 (56%), Positives = 189/274 (68%), Gaps = 11/274 (4%)
Query: 1 MADFRENTQSLRASQAFTEL-GVNMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEF 59
MA+F E Q R SQ TE+ +NMEM+KH E+ PS+LE F+ +FS + LA QQPEF
Sbjct: 1 MAEFAEYQQRFRPSQPLTEMMDMNMEMLKHLPEMNPSILESFSITDFSADSLLARQQPEF 60
Query: 60 LAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTS 119
A + N S F D V TV N++ ++S +R+ EQSTS + +AST+
Sbjct: 61 TATYDHKNLSSTFHPDILSTATVVHTVTLNQNDSHDSKKRKSMEQSTS--SYISPTASTN 118
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEGN-PERIIHVRAKRGQATDSHSIAERVRREKIN 178
ET KK + G K N+++EG+ E +IHVRAKRGQATDSHSIAERVRREKIN
Sbjct: 119 ET-------KKKNNLGGSKKGENKEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKIN 171
Query: 179 KKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESS 238
K+RCLQDLVPGCH+ MGMA MLEEIINYVHSLQNQVEFLSMELAAA SSNDLN TESS
Sbjct: 172 NKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDLNNLTESS 231
Query: 239 RKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
++ QGT+S EA + + W +E YGE T FHS WS+
Sbjct: 232 KRAQGTDSTEAQKTQKWLRERYGEITCFHSAWSI 265
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 152/276 (55%), Positives = 190/276 (68%), Gaps = 4/276 (1%)
Query: 1 MADFRENTQSLRASQAFTEL-GVNMEMVKHFAELKPSMLEYFN-TPNFSLATPLAHQQPE 58
MA+F E Q L ASQ TE+ +NMEM+KH EL PS+LE F+ T +FS + AHQQPE
Sbjct: 1 MAEFAEYLQRLGASQPLTEMMDMNMEMLKHLPELNPSILENFSITHDFSADSFFAHQQPE 60
Query: 59 FLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSAST 118
F A ++N S P V +V N++V +E + + EQST SK + +AS
Sbjct: 61 FPATYNHNKLSSTSHPHILSTAPLVHSVSLNQNVFHERKKPKAMEQSTGSSKNVSPTASI 120
Query: 119 SETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKI 177
+ T+ + ++R K N+++EG+ + +IHVRAKRGQATDSHSIAER+RREKI
Sbjct: 121 NITEKKNILTPSLCAKRRGKKGKNKEKEGDKSKEVIHVRAKRGQATDSHSIAERIRREKI 180
Query: 178 NKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETES 237
N K+RCLQD+VPGCHK MGMA MLEEIINYVHSLQNQVEFLSMELAAA SNDL TES
Sbjct: 181 NNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASCSNDLKNLTES 240
Query: 238 SRKTQGTNS-HEALEMEIWAKEAYGEYTSFHSTWSL 272
S+K QGTNS +A E + W++E YGE T FHSTWS+
Sbjct: 241 SKKAQGTNSTDDAQETQKWSRERYGEITCFHSTWSI 276
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 188/273 (68%), Gaps = 2/273 (0%)
Query: 1 MADFRENTQSLRASQAFTELGVNMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEFL 60
+ DF ++ QS R SQ F + V MEMV FAE+ P MLE FN + S+ LAHQQPE +
Sbjct: 48 IVDFSDSMQSFRPSQPFLGMDVTMEMVNQFAEMNPIMLENFNITDVSVENLLAHQQPELM 107
Query: 61 AGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSE 120
+YN S+F+++ +P V+++ + + +ES RR+V EQS S S+ + S AS S
Sbjct: 108 GTFAYNLQ-SSFESNGLSSMPVVQSMPSSGNAFHESKRRKVMEQSKSSSENISSMASGSG 166
Query: 121 TQGDTYKNKKIRSRRGKKVSSNEKEE-GNPERIIHVRAKRGQATDSHSIAERVRREKINK 179
+ + KK +GKK +++KE P+ +IHVRA+RGQATD+HSIAERVRREKI
Sbjct: 167 LKEISSTKKKNNLGKGKKGRNSDKELLDKPDEVIHVRARRGQATDNHSIAERVRREKIKT 226
Query: 180 KMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSR 239
++RCLQDLVPGC+K+ GMA ML+EIINYVHSLQNQVEFLS ELAAA S ++ N ETE+ +
Sbjct: 227 RLRCLQDLVPGCYKNKGMAVMLDEIINYVHSLQNQVEFLSRELAAASSLHNFNSETEAIK 286
Query: 240 KTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
QGTN+HE EME ++ YGE++ F+ T ++
Sbjct: 287 NAQGTNTHEGQEMEKIVRKGYGEHSCFYPTRTI 319
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/270 (52%), Positives = 173/270 (64%), Gaps = 22/270 (8%)
Query: 20 LGVNMEMVK---HFAELKPSM-LEYFNTPNFSLATPLAHQQ-PEF-LAGCSYNNSFSN-- 71
+ +NM M+K H EL PS L+ F +FS+ + LAHQQ PEF ++ NNS N
Sbjct: 3 MNMNMHMLKQPQHLPELNPSSSLDTFGVADFSVDSFLAHQQQPEFPVSNYGQNNSTINNL 62
Query: 72 ----FQTD---SRIVVPRVRTVRGNEDVLY-ESSRREVTEQSTSISKTMCSSASTSETQG 123
F D S P V TV ++ V++ +S +R+V QSTS SK + + T
Sbjct: 63 SSSTFHPDMLNSSAAPPIVHTVDSSQYVIFRDSKKRKVEAQSTSSSKNV-----SPTTST 117
Query: 124 DTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRC 183
T +K R KK + EKE E +IHVRAKRGQATDSHSIAERVRREKIN K+RC
Sbjct: 118 TTNTKQKNNLGRDKKGKNKEKEVEKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLRC 177
Query: 184 LQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQG 243
LQDLVPGCHK MGMA MLEEIINYVHSLQNQVEFLSMELAAA S DLN+ETESS+K Q
Sbjct: 178 LQDLVPGCHKSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASCSYDLNLETESSKKAQV 237
Query: 244 TNSHEALEMEIWAKEAYGEY-TSFHSTWSL 272
T+S E + W +E YG+ + STWS+
Sbjct: 238 TSSAGTQETQKWLRERYGDLGCCYQSTWSI 267
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 162/240 (67%), Gaps = 7/240 (2%)
Query: 9 QSLRASQAFTELGVNMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEFLAGCSYNNS 68
QS R SQ F + V MEMV FAE+ P MLE FN + S+ LAHQQPE + +YN
Sbjct: 2 QSFRPSQPFLGMDVTMEMVNQFAEMNPIMLENFNITDVSVEXLLAHQQPELMGTFAYNLQ 61
Query: 69 FSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKN 128
S+F+++ +P V+++ + + +ES RR+V EQS S S+ + S AS S + +
Sbjct: 62 -SSFESNGLSSMPVVQSMPSSGNAFHESKRRKVMEQSKSSSENISSMASGSGLKEISSTK 120
Query: 129 KKIRSRRGKKVSSNEKEE-GNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDL 187
KK +GKK +++KE P+ +IHVRA+RGQATD+HSIAERVRREKI ++RCLQDL
Sbjct: 121 KKNNLGKGKKGRNSDKELLDKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDL 180
Query: 188 VPGCHK-----DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQ 242
VPGC+K + GMA ML+EIINYVHSLQNQVEFLS ELAAA S ++ N ETE+ + Q
Sbjct: 181 VPGCYKVYDPQNKGMAVMLDEIINYVHSLQNQVEFLSRELAAASSLHNFNSETEAIKNAQ 240
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/281 (43%), Positives = 164/281 (58%), Gaps = 17/281 (6%)
Query: 1 MADFRENTQSLRASQAFTELGVNMEMVKHFAELKPSMLEYFNTPNFSLATPL------AH 54
MADF + QS R F ++ +M + F E+ ++L+ + N P +H
Sbjct: 1 MADFTADLQSFRPPFPFLDIDPSMVALSQFTEVSQAILDNPSVNNIHSFMPFTSDNFFSH 60
Query: 55 QQPEFLAGCSYNNSFSN-FQTDSRIVVP--RVRTVRGNEDVLYESSRREVTEQSTSISKT 111
Q PEF + F+ F + + V+P + T GNE ES +R+ + S S S
Sbjct: 61 QAPEFPGNLA--EGFAGIFHQNDQTVMPVSQPFTTPGNESEFQESKKRKAMDVSESSSMN 118
Query: 112 MCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAER 171
S S G +N SRRGK V SNE +G P+ ++HVRA+RGQATDSHS+AER
Sbjct: 119 SSPQVSES---GSKRRNVN-SSRRGKGVKSNE--DGKPKDVVHVRARRGQATDSHSLAER 172
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDL 231
VRR KIN+++RCLQD+VPGC+K MGMA ML+EIINYV SLQNQVEFLSM+L AA + D
Sbjct: 173 VRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDF 232
Query: 232 NIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
N ET++ Q + EA E++ +E G + HSTWSL
Sbjct: 233 NAETDAIETMQRAKAQEAKELQRAMREGSGGFAHIHSTWSL 273
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/276 (45%), Positives = 158/276 (57%), Gaps = 22/276 (7%)
Query: 1 MADFRENTQSLRASQAFTELGVNMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEFL 60
MA+F N QSL+ S E+ NME++ + + + S + FS H Q EF
Sbjct: 1 MAEFAANLQSLKPSS--LEMNSNMELMNNRSAPENSHMNGHGFMAFSNVGFSIHHQQEFP 58
Query: 61 AGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSS---AS 117
N T S + + V+ VL SS+ Q T K S AS
Sbjct: 59 VNFRDN-------TQSPVHAGGLSAVQ----VLQFSSQPGDFGQETKTGKVNFVSSPPAS 107
Query: 118 TSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKI 177
SE GD NK + R+ K+ SNE+E P +IHVRAKRGQATDSHS+AERVRREKI
Sbjct: 108 GSEFLGD---NKNLGGRKRKR--SNERENNKPREVIHVRAKRGQATDSHSLAERVRREKI 162
Query: 178 NKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-IETE 236
N+K+RCLQDLVPGC+K MGMA ML+ IINYV SLQNQ+EFLSM+L+AA + D N E E
Sbjct: 163 NEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFNSSEAE 222
Query: 237 SSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
+ QGTN++E E+E KE YG + HSTW
Sbjct: 223 ALETMQGTNAYEVHEVERSVKEGYGGPSHLHSTWPF 258
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 161/279 (57%), Gaps = 20/279 (7%)
Query: 1 MADFRENTQSLRASQAFTELGVNMEMVKHFAELKPSM-LEYFNTPNFSLATPL------A 53
MADF + QS + F ++ +M + F E+ ++ L+ NF TP +
Sbjct: 1 MADFTVDLQSFKPPFPFLDIDASMAAINQFTEVNQAIQLDNPIMNNFHSFTPFTSNNFFS 60
Query: 54 HQQPEF---LAGCSYNNSFSNFQTDSRIV-VPRVRTVRGNEDVLYESSRREVTEQSTSIS 109
HQ PEF AG SF Q D ++ V + T+ E ES RR + +S
Sbjct: 61 HQAPEFPGNFAGSFLPGSFH--QNDQNVMPVSQTFTIPAKESEFQESKRR-----AMDVS 113
Query: 110 KTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIA 169
++ C ++ ++ + K K SRRGK+V SNE+EE ++HVRA+RGQATDSHS+A
Sbjct: 114 ESSCMNSYPRVSESGSKKRKS--SRRGKRVKSNEEEEEKTREVVHVRARRGQATDSHSLA 171
Query: 170 ERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSN 229
ERVRR KIN+++RCLQD+VPGC+K MGMA ML+EIINYV SLQNQVEFLSM+L AA +
Sbjct: 172 ERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFY 231
Query: 230 DLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHS 268
D N ETE+ Q + E E++ +E G HS
Sbjct: 232 DFNAETEAIETVQRAKAQETKELQRAMREGSGGLAQSHS 270
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 161/283 (56%), Gaps = 21/283 (7%)
Query: 1 MADFRENTQ----SLRASQ-AFTELGVNMEMVKHFAELKPSMLE------YFNTPNFSLA 49
MA+F EN Q +R SQ F E+ +ME++ F + +LE N FS
Sbjct: 1 MAEFTENMQLQSNIIRPSQFPFLEIDPSMELLNQFIGMNQHVLENSNLSTMHNLVPFSCD 60
Query: 50 TPLAHQQPEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSIS 109
T L Q+PEF N F + +P + E+ ++E +R+ S+
Sbjct: 61 TFLGPQEPEFPGNLEEN--FPALVNHN--ALPVSLPIFQAENEIHEGKKRK------SVD 110
Query: 110 KTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIA 169
SSA+++ ++ K S RGK+V SN EE + ++HVRA+RGQATDSHS+A
Sbjct: 111 LPETSSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLA 170
Query: 170 ERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSN 229
ERVRR KIN+K+RCLQ++VPGC+K MGMA ML+EIINYV SLQ+QVEFLS++L AA +
Sbjct: 171 ERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFY 230
Query: 230 DLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
D N ET++ Q + EA E+ + KE YG + F W L
Sbjct: 231 DFNSETDALETMQRARASEAKELGKYKKEGYGGVSFFQPAWPL 273
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 165/283 (58%), Gaps = 22/283 (7%)
Query: 1 MADFRENTQ---SLRASQ-AFTELGVNMEMVKHFAELKPSMLE------YFNTPNFSLAT 50
MA+F EN Q ++R SQ F E+ +ME++ F + +LE N FS T
Sbjct: 1 MAEFTENMQLQSNIRPSQFPFLEIDPSMELLNQFLGMNQHVLENSNLIPMHNLVPFSCDT 60
Query: 51 PLAHQQPEFLAGCSYNNSFSNFQTD-SRIVVPRVRTVRGNEDVLYESSRREVTEQSTSIS 109
L Q+PE C N NF + +P + E+ ++E +R +S +
Sbjct: 61 FLGPQEPE----CP-GNLEENFPAHVNHNALPISLPIFQAENEIHEGKKR----KSMDLP 111
Query: 110 KTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIA 169
+T SSA+++ ++ K S RGK+V SN EE + ++HVRA+RGQATDSHS+A
Sbjct: 112 ET--SSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLA 169
Query: 170 ERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSN 229
ERVRR KIN+K+RCLQ++VPGC+K MGMA ML+EIINYV SLQ+QVEFLS++L AA +
Sbjct: 170 ERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFY 229
Query: 230 DLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
D N ET++ Q + EA E+ + KE YG + F W L
Sbjct: 230 DFNSETDALETMQRARASEAKELGKYKKEGYGGVSFFQPAWPL 272
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 114/158 (72%), Gaps = 6/158 (3%)
Query: 116 ASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRRE 175
AS SE GD NK + R+ K+ SNE+E P +IHVRAKRGQATDSHS+AERVRRE
Sbjct: 85 ASGSEFLGD---NKNLGGRKRKR--SNERENNKPREVIHVRAKRGQATDSHSLAERVRRE 139
Query: 176 KINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-IE 234
KIN+K+RCLQDLVPGC+K MGMA ML+ IINYV SLQNQ+EFLSM+L+AA + D N E
Sbjct: 140 KINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFNSSE 199
Query: 235 TESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
E+ QGTN++E E+E KE YG + HSTW
Sbjct: 200 AEALETMQGTNAYEVHEVERSVKEGYGGPSHLHSTWPF 237
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 114/158 (72%), Gaps = 6/158 (3%)
Query: 116 ASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRRE 175
AS SE GD NK + R+ K+ SNE+E P +IHVRAKRGQATDSHS+AERVRRE
Sbjct: 89 ASGSEFLGD---NKNLGGRKRKR--SNERENNKPREVIHVRAKRGQATDSHSLAERVRRE 143
Query: 176 KINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-IE 234
KIN+K+RCLQDLVPGC+K MGMA ML+ IINYV SLQNQ+EFLSM+L+AA + D N E
Sbjct: 144 KINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFNSSE 203
Query: 235 TESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
E+ QGTN++E E+E KE YG + HSTW
Sbjct: 204 AEALETMQGTNAYEVHEVERSVKEGYGGPSHLHSTWPF 241
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
SRRGK+ S E +E P+ ++HVRA+RGQATDSHS+AERVRR KIN+++RCLQD+VPGC+
Sbjct: 52 SRRGKRTKSKEDDE-KPKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 110
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEM 252
K MGMA ML+EIINYV SLQNQVEFLSM+L AA + D N ET++ Q + EA E+
Sbjct: 111 KTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSETDAIETMQRAKAQEAKEI 170
Query: 253 EIWAKEAYGEYTSFHSTWSL 272
E KE YG T+FH TWSL
Sbjct: 171 ERVMKEGYGGLTNFHPTWSL 190
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 163/287 (56%), Gaps = 28/287 (9%)
Query: 1 MADFRENTQSLRASQAFTELGVNMEMVKHFAELKPSMLEYFNTPN--------FSLATPL 52
MA+ EN QS+R S F ++ +ME++ F + P + + N FS + L
Sbjct: 1 MAEITENLQSIRPSFPFLDIDPSMELLSQFMGMNPQHVMDNSNMNMNMQNLMPFSCDSIL 60
Query: 53 AHQQPEF-------LAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQS 105
++PEF G ++ S + F P + ED + E +R++
Sbjct: 61 GPEEPEFPENLEGTFPGLVHHVSHNAF--------PVSLPIFPAEDEIIEGKKRKMI--- 109
Query: 106 TSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDS 165
I +T SSA+++ ++ K S RGK+ SN EE + ++HVRA+RGQATDS
Sbjct: 110 MDIQET--SSANSTPAVSESGSRIKNNSGRGKRAKSNVTEEEKEKEVVHVRARRGQATDS 167
Query: 166 HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
HS+AERVRR KIN+K+RCLQ++VPGC+K MGMA ML+EIINYV SLQ+QVEFLS++L AA
Sbjct: 168 HSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAA 227
Query: 226 CSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
+ D N ET++ Q + EA E+ + +E YG + F TW L
Sbjct: 228 STYYDFNSETDAIETMQRARASEAKELARYKREEYGGISCFQPTWPL 274
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Query: 128 NKKIRSRRGKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
N K S +GK++ S EKEE R ++HVRA+RGQATDSHS+AERVRR KIN+++RCL+D
Sbjct: 120 NTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKD 179
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNS 246
+VPGC+K MGMA ML+EIINYV SLQNQVEFLSM+LAAA S D N E ++ K Q +
Sbjct: 180 IVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQRAKA 239
Query: 247 HEALEMEIWAKEAYGEYTSFHSTWSL 272
HEA E+E KE YG FHS L
Sbjct: 240 HEAKELERLMKEGYGGIACFHSNLPL 265
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 153/273 (56%), Gaps = 28/273 (10%)
Query: 1 MADFRENTQSLRASQAFTELGV-NMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEF 59
MA+F + QSLR F L + NME ++ F P FS + L + EF
Sbjct: 1 MAEFTADLQSLR----FPFLDIDNME------------IQNFMMP-FSCESFLGSPEAEF 43
Query: 60 LAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMC--SSAS 117
N + Q VP + + ++ ++E +R+ T+ +C SSA+
Sbjct: 44 PGNLLEENFPALVQCVDHNEVPVLVPIGSVKNEIHEGQKRKATD--------ICEPSSAN 95
Query: 118 TSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKI 177
++ ++ K S RGK+V N E+ P ++HVRAKRGQATDSHS+AERVRR KI
Sbjct: 96 STPAVSESGSKTKNSSGRGKRVKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKI 155
Query: 178 NKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETES 237
N+K+RCLQ++VPGC+K MGMA ML+EIINYV SLQ+QVEFLSM+L AA + DLN E+++
Sbjct: 156 NEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLNSESDA 215
Query: 238 SRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTW 270
Q + E E+ +E E + F TW
Sbjct: 216 LETMQRARASEVKELGKCVREGSEEVSCFEPTW 248
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 155/282 (54%), Gaps = 27/282 (9%)
Query: 1 MADFRENTQSLRASQAFTELGV-NMEMVKHFA-----ELKPSMLEYFNTPNFSLATPLAH 54
MA+F + QSLR S +F L + NME++ H L S+L N FS +
Sbjct: 1 MAEFTADWQSLRPS-SFPFLDIDNMELLNHLKGVNSHTLDNSILNMQNLMQFSSGSFFCS 59
Query: 55 QQPEFLAGCSYN--NSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTM 112
+PEF N +F ++ V P + +V E +R+ T S S
Sbjct: 60 SEPEFQGNLEENMPGLVHHFNQNAAPVSPPISSVEN------EGRKRKATNMSGPSSANS 113
Query: 113 CSSASTSETQGDTYKNKKIR--SRRGKKVSSN--EKEEGNPERIIHVRAKRGQATDSHSI 168
S S SE+ KI+ S RGK+V N E+E+ +++HVRA+RGQATDSHS+
Sbjct: 114 TPSVSESES--------KIKNCSGRGKRVKKNMMEEEDKKSTQVVHVRARRGQATDSHSL 165
Query: 169 AERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSS 228
AERVRR KIN+K++CLQ++VPGC+K MGMA ML+EIINYV SLQ+QVEFLSM+L AA +
Sbjct: 166 AERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTF 225
Query: 229 NDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTW 270
D N E S Q EA E+ + E Y + F TW
Sbjct: 226 YDFNSEINSLEAMQRARVSEAKELAKYVTEGYEGVSCFQPTW 267
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 150/254 (59%), Gaps = 24/254 (9%)
Query: 1 MADFRENTQSLRASQ-AFTELGVNMEMVKHFAELKPSMLE--YFNTPNFSLATPLAHQQP 57
MADF N QSL+ S ++ N +F + P + +FN A P P
Sbjct: 1 MADFTPNFQSLKPSSFPLMDIDPNQNPNLNFLDNIPILFSESFFNN---QTAVP----SP 53
Query: 58 EFLA--GCSYNNSFSNFQTDSRIVVP------RVRTVRGNEDVLYESSRREVTEQSTSIS 109
FL G ++ FS+ Q + +I+ P + + GN+ L+ S +R++ S
Sbjct: 54 RFLENWGENFQGIFSHHQAN-QIITPTSSPVFEPKNLFGND--LHGSKKRKLENNDAYES 110
Query: 110 KTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIA 169
+ S+ SE G KN + +R KK +N+ E+ P ++HVRA+RGQATDSHS+A
Sbjct: 111 SSGNSTPQVSEN-GINTKNNNGKEKRSKKGDTNDGEK--PREVVHVRARRGQATDSHSVA 167
Query: 170 ERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSN 229
ER+RR KIN+++RCLQD+VPGC+K MGMA ML+EIINYV SLQNQVEFLSM+L AA S +
Sbjct: 168 ERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSYH 227
Query: 230 DLNIETESSRKTQG 243
D N ++++ K +G
Sbjct: 228 DFNSDSDAEDKLKG 241
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 153/272 (56%), Gaps = 30/272 (11%)
Query: 1 MADFRENTQSLRASQAFTELGV-NMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEF 59
MA+F + QSLR F L + NMEM + P FS + L + EF
Sbjct: 1 MAEFTADLQSLR----FPFLDIDNMEM------------QNLMMP-FSCESFLGSPEAEF 43
Query: 60 LAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTS 119
N N + ++VP + +V+ NE ++E +R+ T+ SSA+++
Sbjct: 44 AGNLEENFPDHN---EVPVLVPIINSVK-NE--IHEGQKRKATDIWEP------SSANST 91
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINK 179
++ K RGK+V N E+ P ++HVRAKRGQATDSHS+AERVRR KIN+
Sbjct: 92 PAVFESGSKTKNSCGRGKRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINE 151
Query: 180 KMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSR 239
K+RCLQ++VPGC+K MGMA ML+EIINYV SLQ+QVEFLSM+L AA + D N E++
Sbjct: 152 KLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFNSESDVLE 211
Query: 240 KTQGTNSHEALEMEIWAKEAYGEYTSFHSTWS 271
Q + E E++ + +E + F TWS
Sbjct: 212 TMQRARASEVKELDRYVREECEGVSCFEPTWS 243
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 153/272 (56%), Gaps = 27/272 (9%)
Query: 14 SQAFTELGVNMEMVKHFAELKPSMLEYFNT--PNFS--LATPLAHQQ-PEFLAGCSYNNS 68
S F ++ + + AEL + L F T P FS L + H Q P+ G N+
Sbjct: 6 SSDFQTFTMDDDPITQLAELS-NTLHQFQTFPPPFSSCLDSLFFHNQFPDHFPGKPLENN 64
Query: 69 F-------SNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSET 121
F SN Q + + RV T + +S V+ S+S SS+S +
Sbjct: 65 FHQGIFFPSNIQNNDK-SSSRVDTKK------RKSLMEGVSTSENSVSDQTLSSSSAQVS 117
Query: 122 QGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKM 181
K SRRGK+ S N +EE + E ++HVRA+RGQATDSHSIAERVRR KIN+++
Sbjct: 118 LNGNSLTKNNSSRRGKR-SKNREEEKDRE-VVHVRARRGQATDSHSIAERVRRGKINERL 175
Query: 182 RCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKT 241
+CLQD+VPGC+K MGMA ML+EIINYV SLQNQVEFLSM+L AA S D N ET++
Sbjct: 176 KCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESM 235
Query: 242 QGTNSHEALEMEIWAKEAYGEYTSFH-STWSL 272
Q + EA+EM + + FH S+W+L
Sbjct: 236 QRAKAREAVEM----GQGRDGNSVFHSSSWTL 263
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 154/269 (57%), Gaps = 18/269 (6%)
Query: 1 MADFRENTQSLRASQ-AFTELGVNMEMVKHFAELK-------PSMLEYFNTPNFSLATPL 52
MA+F EN Q + S F ++ +ME++ F + +++ YF+ F L
Sbjct: 1 MAEFTENLQRIGPSSFPFLDIDPSMELLNQFIGMNQLYVLDNSNLMPYFSFDTFLLGP-- 58
Query: 53 AHQQPEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTM 112
Q+PEF + F + +P + E+ ++E +R+ + + S +
Sbjct: 59 --QEPEFPGNLEEDFPFLFNHVNHNNALPISLPIFQAENEIHEGKKRKSMDLPETSS--V 114
Query: 113 CSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERV 172
S+ SE+ G+ +K+ S RGK+V +N EE + +++VRA+ GQATDS ++AERV
Sbjct: 115 NSTPKVSES-GNKFKHS---SGRGKRVKNNVTEEEKAKEVVNVRARSGQATDSRNLAERV 170
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
RR KIN+K+R LQ++VPGC+K MGMA ML+EIINYV SLQNQVEFLS++L A + D N
Sbjct: 171 RRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSLKLTAPSTFYDFN 230
Query: 233 IETESSRKTQGTNSHEALEMEIWAKEAYG 261
E ++ Q + EA E+ ++ +E YG
Sbjct: 231 SEIDALETMQRARASEAKELGMYKREGYG 259
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 162/275 (58%), Gaps = 10/275 (3%)
Query: 1 MADFRENTQSLRASQAFTELGVNMEMVKHFAEL-KPSMLEYFN-TPNFSLATPLAHQQPE 58
MA+F EN Q++ +S F ++ +ME++ F + + +L+ N P FS T L Q+PE
Sbjct: 1 MAEFTENLQNISSSSPFLDIDPSMELLNQFIGMNQLYVLDNSNLMPYFSCDTFLGPQEPE 60
Query: 59 FLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSAST 118
F + F F + P + E+ ++E ++R+ S+ S A++
Sbjct: 61 FPGNLEEDFPFL-FHHVNHNAPPVSLPIFQAENEIHEGNKRK------SMDLLETSFANS 113
Query: 119 SETQGDTYKNKKIRSRRGKKVSSN-EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKI 177
+ +T K S RGK++ +N +EE + +++ RA+RGQATDSH++AERVRR KI
Sbjct: 114 TSAVSETGSKIKHSSGRGKRLKNNVTEEEEKAKEVVNARARRGQATDSHNLAERVRRGKI 173
Query: 178 NKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETES 237
N+K+R LQ++VPGC+K M MA ML+EIINYV SLQ+QVEFLS+EL AA + D N E ++
Sbjct: 174 NEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQVEFLSLELTAASTFYDFNSEIDA 233
Query: 238 SRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
Q + ++EA E+ + +E +G + TW L
Sbjct: 234 FETMQRSRAYEAKELGKYKREGHGGVSLLQPTWHL 268
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 151/252 (59%), Gaps = 24/252 (9%)
Query: 27 VKHFAELKPSMLEYFNT--PNFS--LATPLAHQQ-PEFLAGCSYNNSFSNFQTDSRIVVP 81
++ AEL + L +F T P FS L + H Q P+ G S N+F I P
Sbjct: 17 IRQLAELS-NTLHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKSLENNFHQ-----GIFFP 70
Query: 82 RVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSS 141
++ NE ESS + T++ S+ + + +S ++ Q + + + SRRGK+ S
Sbjct: 71 S--NIQNNE----ESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQNSSRRGKR--S 122
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
+EE ++HVRA+RGQATDSHSIAERVRR KIN++++CLQD+VPGC+K MGMA ML
Sbjct: 123 KNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATML 182
Query: 202 EEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYG 261
+EIINYV SLQNQVEFLSM+L AA S D N ET++ Q + EA+EM +
Sbjct: 183 DEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVEM----GQGRD 238
Query: 262 EYTSFH-STWSL 272
+ FH S+W+L
Sbjct: 239 GSSVFHSSSWTL 250
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 150/259 (57%), Gaps = 27/259 (10%)
Query: 27 VKHFAELKPSMLEYFNT--PNFS--LATPLAHQQ-PEFLAGCSYNNSFSNFQTDSRIVVP 81
++ AEL + L +F T P FS L + H Q P+ G S N+F I P
Sbjct: 17 IRQLAELS-NTLHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKSLENNFHQ-----GIFFP 70
Query: 82 RVRTVRGNEDV--LYESSRRE-----VTEQSTSISKTMCSSASTSETQGDTYKNKKIRSR 134
++ NE+ +++ +R+ V+ S+S S++S + K SR
Sbjct: 71 S--NIQNNEESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR 128
Query: 135 RGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
RGK+ S +EE ++HVRA+RGQATDSHSIAERVRR KIN++++CLQD+VPGC+K
Sbjct: 129 RGKR--SKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKT 186
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEI 254
MGMA ML+EIINYV SLQNQVEFLSM+L AA S D N ET++ Q + EA+EM
Sbjct: 187 MGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVEM-- 244
Query: 255 WAKEAYGEYTSFH-STWSL 272
+ + FH S+W+L
Sbjct: 245 --GQGRDGSSVFHSSSWTL 261
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 153/281 (54%), Gaps = 27/281 (9%)
Query: 1 MADFRENTQSL-RASQAFTELGVNMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEF 59
MA+F EN Q++ R S F + +ME++ F E +M N FS + L H Q E
Sbjct: 1 MAEFTENFQNIIRPSLPFLDSDQSMELLNQFME-NSNMNMMHNLMPFSCDSILEHHQQEH 59
Query: 60 LAGCSYNNSFS------NFQTDSRIVVPRVRTVRGNEDVLYESSRREVTE--QSTSISKT 111
+ + +F N Q + + + + V +E +R++ + +++S + T
Sbjct: 60 VFPRNLEENFHGLVHHVNNQNHNAVQLSLPTIFQEENKVHHEGKKRKMMDFQETSSGNST 119
Query: 112 MCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAER 171
S S S+T K+ RGK+V S E EE + ++HVRA+RGQATDSHS+AER
Sbjct: 120 PAVSESGSKT--------KLSGGRGKRVKSYETEEEKAKEVVHVRARRGQATDSHSLAER 171
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDL 231
VRR KIN+K++CLQ++VPGC+K MGMA ML+EIINY FLS++L AA + D
Sbjct: 172 VRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINY---------FLSLKLTAASTYYDF 222
Query: 232 NIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTWSL 272
N E + Q + EA E+ + ++ YG + F TW L
Sbjct: 223 NSEADDLETMQRARASEAKELARYKRDGYGGISCFQPTWPL 263
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 140/252 (55%), Gaps = 18/252 (7%)
Query: 1 MADFRENTQSLR-ASQAFTELGVNMEMVKHFAELKPSMLEYFNTP--NF-SLATPLAHQQ 56
MADF + Q + +S E N ++ + +F+ P NF +L T + Q
Sbjct: 1 MADFTADLQGFKTSSYPLFEADPNTGLIS--TQSTEQNQGFFDNPSLNFQALETFFSQQP 58
Query: 57 PEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSA 116
PEF S FQ ++ VP + D L E+ +R+ ++ S S+
Sbjct: 59 PEFPGNLS-----EIFQ--QKVAVPMAQAEVSAGDSLCENKKRKARVDASESSSGNSSTP 111
Query: 117 STSETQGDTYKNKKIRSRRGKK-VSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRRE 175
+ K K S RGK+ + S EKE+ P ++HVRA+RGQATDSHS+AERVRR
Sbjct: 112 ACESG----LKRGKNSSGRGKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRG 167
Query: 176 KINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
KIN+++RCLQD+VPGC+K MGMA ML+EIINYV SLQNQVEFLSM+L AA D N +T
Sbjct: 168 KINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASQYYDFNSDT 227
Query: 236 ESSRKTQGTNSH 247
++ Q H
Sbjct: 228 DTLETIQRGKVH 239
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 150/259 (57%), Gaps = 28/259 (10%)
Query: 27 VKHFAELKPSMLEYFNT--PNFS--LATPLAHQQ-PEFLAGCSYNNSFSNFQTDSRIVVP 81
++ AEL + L +F T P FS L + H Q P+ G S N+F I P
Sbjct: 17 IRQLAELS-NTLHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKSLENNFHQ-----GIFFP 70
Query: 82 RVRTVRGNEDV--LYESSRRE-----VTEQSTSISKTMCSSASTSETQGDTYKNKKIRSR 134
++ NE+ +++ +R+ V+ S+S S++S + K SR
Sbjct: 71 S--NIQNNEESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR 128
Query: 135 RGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
RGK+ S +EE ++HVRA+RGQATDSHSIAERVRR KIN++++CLQD+VPGC+K
Sbjct: 129 RGKR--SKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKT 186
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEI 254
MGMA ML+EIINYV SLQNQVEFLSM+L AA S D N ET++ Q + EA+EM
Sbjct: 187 MGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQA-KAREAVEM-- 243
Query: 255 WAKEAYGEYTSFH-STWSL 272
+ + FH S+W+L
Sbjct: 244 --GQGRDGSSVFHSSSWTL 260
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 2/133 (1%)
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
N E P+ ++HVRAKRGQATDSHS+AERVRREKIN++++CLQDLVPGC+K MGMA ML
Sbjct: 91 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 150
Query: 202 EEIINYVHSLQNQVEFLSMELAAACSSNDLN-IETESSRKTQGTNSHEALEMEIWAKEAY 260
+ II+YV SLQNQ+EFLSM+L+AA + DLN ++ E + QG N H A EME +E+
Sbjct: 151 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRESV 210
Query: 261 G-EYTSFHSTWSL 272
G + +F ST
Sbjct: 211 GTQPPNFSSTLPF 223
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
SRRGK++ +EE ++HVRA+RGQATDSHS+AERVRR KIN+++RCLQD+VPGC+
Sbjct: 126 SRRGKRLKKKNQEEEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 185
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEM 252
K MGMA ML+EIINYV SLQNQVE LSM+L AA S D N ET++ Q + EA+EM
Sbjct: 186 KSMGMATMLDEIINYVQSLQNQVELLSMKLTAASSFYDFNSETDAVDSMQRAKAREAVEM 245
Query: 253 EIWAKEAYGEYTSFHSTWSL 272
++ G S WSL
Sbjct: 246 GRQTRD--GNPVLHLSAWSL 263
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 2/133 (1%)
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
N E P+ ++HVRAKRGQATDSHS+AERVRREKIN++++CLQDLVPGC+K MGMA ML
Sbjct: 34 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 93
Query: 202 EEIINYVHSLQNQVEFLSMELAAACSSNDLN-IETESSRKTQGTNSHEALEMEIWAKEAY 260
+ II+YV SLQNQ+EFLSM+L+AA + DLN ++ E + QG N H A EME +E+
Sbjct: 94 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRESV 153
Query: 261 G-EYTSFHSTWSL 272
G + +F ST
Sbjct: 154 GTQPPNFSSTLPF 166
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 2/133 (1%)
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
N E P+ ++HVRAKRGQATDSHS+AERVRREKIN++++CLQDLVPGC+K MGMA ML
Sbjct: 91 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 150
Query: 202 EEIINYVHSLQNQVEFLSMELAAACSSNDLN-IETESSRKTQGTNSHEALEMEIWAKEAY 260
+ II+YV SLQNQ+EFLSM+L+AA + DLN ++ E + QG N H A EME +E+
Sbjct: 151 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRESV 210
Query: 261 G-EYTSFHSTWSL 272
G + +F ST
Sbjct: 211 GTQPPNFSSTLPF 223
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 91/122 (74%), Gaps = 4/122 (3%)
Query: 152 IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSL 211
++HVRA+RGQATDSHS+AERVRR KIN+++RCLQD+VPGC+K MGMA ML+EIINYV SL
Sbjct: 142 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSL 201
Query: 212 QNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFH-STW 270
QNQVEFLSM+L AA S D N ET++ Q + E +EM ++ FH STW
Sbjct: 202 QNQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEM---GRQTRDGSPVFHLSTW 258
Query: 271 SL 272
SL
Sbjct: 259 SL 260
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 91/122 (74%), Gaps = 4/122 (3%)
Query: 152 IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSL 211
++HVRA+RGQATDSHS+AERVRR KIN+++RCLQD+VPGC+K MGMA ML+EIINYV SL
Sbjct: 1036 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSL 1095
Query: 212 QNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFH-STW 270
QNQVEFLSM+L AA S D N ET++ Q + E +EM ++ FH STW
Sbjct: 1096 QNQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEM---GRQTRDGSPVFHLSTW 1152
Query: 271 SL 272
SL
Sbjct: 1153 SL 1154
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 91/122 (74%), Gaps = 4/122 (3%)
Query: 152 IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSL 211
++HVRA+RGQATDSHS+AERVRR KIN+++RCLQD+VPGC+K MGMA ML+EIINYV SL
Sbjct: 1025 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSL 1084
Query: 212 QNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFH-STW 270
QNQVEFLSM+L AA S D + ET++ Q + E +EM ++ FH STW
Sbjct: 1085 QNQVEFLSMKLNAASSFYDFSSETDAVDSMQRAKARETVEM---GRQTRDGSPVFHLSTW 1141
Query: 271 SL 272
SL
Sbjct: 1142 SL 1143
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 86/124 (69%), Gaps = 3/124 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ IHVRA+RGQATDSHS+AERVRREKI+K+M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 347 PKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYV 406
Query: 209 HSLQNQVEFLSMELAAACSSNDLNIETESSR---KTQGTNSHEALEMEIWAKEAYGEYTS 265
SLQ QVEFLSM+LA D N+ET + K G++SH M+ + +Y S
Sbjct: 407 QSLQRQVEFLSMKLATVNPRMDFNMETLVPKDIFKGPGSSSHTVYPMDSSVPQFAYDYQS 466
Query: 266 FHST 269
H T
Sbjct: 467 MHVT 470
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 114/190 (60%), Gaps = 22/190 (11%)
Query: 97 SRREVTEQSTSISKTMCSSAS-------TSETQGDTYKNKKIR----SRRG--------K 137
S+ + E STS + M + AS + +G+ +N +++ S+ G K
Sbjct: 309 SKGKAKETSTSTNPPMAAEASDDSNAKRSKPNEGEGNENGQVKAEEESKGGNNSNANDEK 368
Query: 138 KVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGM 197
+ SN K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 369 QNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 428
Query: 198 AGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKT-QGTNS--HEALEMEI 254
A ML+EIINYV SLQ QVEFLSM+LA+ + D +IE+ S+ Q NS ++
Sbjct: 429 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIESLISKDIFQSNNSLAQPIFPIDS 488
Query: 255 WAKEAYGEYT 264
A YG+ T
Sbjct: 489 SAPPFYGQQT 498
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 91/130 (70%), Gaps = 3/130 (2%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K+ SN K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 367 KQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 426
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKT-QGTNS--HEALEME 253
A ML+EIINYV SLQ QVEFLSM+LA+ + D +IE+ S+ Q NS H ++
Sbjct: 427 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIESLISKDIFQSNNSLAHPIFLID 486
Query: 254 IWAKEAYGEY 263
A YG++
Sbjct: 487 SSAPPFYGQH 496
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 109 SKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSI 168
S +M S+ S + TQGD K K S+ K EE P IHVRA+RGQATDSHS+
Sbjct: 119 SSSMTSANSKNVTQGDNGKKNKSNSKLVAKDEKKANEEA-PTGYIHVRARRGQATDSHSL 177
Query: 169 AERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
AERVRREKI+++M+ LQ LVPGC K G A ML+EIINYV SLQNQVEFLSM+LA+
Sbjct: 178 AERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 233
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 108/184 (58%), Gaps = 19/184 (10%)
Query: 96 SSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGN------- 148
S +R+ ++ S +SA +E D K+ + V + E+ +GN
Sbjct: 277 SKKRKTAPKAKSKEAPQPNSAKDAEVD-DNSNAKRSKGNEKNDVKAEEEHKGNGDDKQNK 335
Query: 149 --------PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A M
Sbjct: 336 ASTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 395
Query: 201 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKT-QGTN--SHEALEMEIWAK 257
L+EIINYV SLQ QVEFLSM+LA+ + D+N++T S+ Q TN H ++ A
Sbjct: 396 LDEIINYVQSLQRQVEFLSMKLASVNTRLDINLDTLMSKDIFQTTNQLPHPIFPIDSSAS 455
Query: 258 EAYG 261
+G
Sbjct: 456 AIFG 459
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREK 176
S +E QGD K KKI S+ K EE P IHVRA+RGQATDSHS+AERVRREK
Sbjct: 116 SKNEKQGDNGKKKKINSKLVAKDEKKANEEA-PTGYIHVRARRGQATDSHSLAERVRREK 174
Query: 177 INKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
I+++M+ LQ LVPGC K G A ML+EIINYV SLQNQVEFLSM+L +
Sbjct: 175 ISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTS 222
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 83/111 (74%), Gaps = 2/111 (1%)
Query: 114 SSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVR 173
SSA+ S K+ K SRRGK+ S+ +E P+ IHVRA+RGQATDSHS+AERVR
Sbjct: 86 SSATLSSAHSKDCKDGK--SRRGKREKSSTDQEEAPKGYIHVRARRGQATDSHSLAERVR 143
Query: 174 REKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
RE+I+++MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 144 RERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 194
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 88/127 (69%), Gaps = 6/127 (4%)
Query: 141 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
SN K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A M
Sbjct: 325 SNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 384
Query: 201 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKT-QGTNSHEALEMEIW---- 255
L+EIINYV SLQ QVEFLSM+LA+ + DL+IE S+ Q NS L ++
Sbjct: 385 LDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIENLISKDVFQSNNSLATLPNAVFPLDS 444
Query: 256 -AKEAYG 261
A+ YG
Sbjct: 445 SAQTFYG 451
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 77/95 (81%)
Query: 141 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
SN K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A M
Sbjct: 358 SNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 417
Query: 201 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
L+EIINYV SLQ QVEFLSM+LA+ + DL+IE+
Sbjct: 418 LDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIES 452
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 97/140 (69%), Gaps = 8/140 (5%)
Query: 90 EDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGN- 148
ED ESS V + S S+ + ++ ++ ++ D+ K+ K SRRGKK S +E+
Sbjct: 56 EDASLESSVSAVLDTSPSVDRKRKAAEDSAHSK-DSCKDGK--SRRGKKASKEVEEKSTT 112
Query: 149 ----PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEI 204
P+ IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ LVPGC K G A +L+EI
Sbjct: 113 EDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEI 172
Query: 205 INYVHSLQNQVEFLSMELAA 224
INYV SLQNQVEFLSM +A+
Sbjct: 173 INYVQSLQNQVEFLSMRIAS 192
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
+SN K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G AG
Sbjct: 171 TSNSKASEKPD-YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAG 229
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
ML+EIINYV SLQ QVEFLSM+LAA DL+I+
Sbjct: 230 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLSID 264
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S KVS + K + IHVRA+RGQATDSHS+AER RREKI+KKM+ LQDLVPGC+
Sbjct: 173 SPNASKVSGSPKPD-----YIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCN 227
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
K G AGML+EIINYV SLQ QVEFLS++LA D N++T
Sbjct: 228 KITGKAGMLDEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDT 270
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 25/155 (16%)
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGKK--VSSN----EKEEGNPER------- 151
S+ + K + S E+ G+ + +K +S++ VSS+ EKE+ +P+R
Sbjct: 183 SSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEEN 242
Query: 152 ------------IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A
Sbjct: 243 GDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 302
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
ML+EIINYV SLQ QVEFLSM+L++ + D N++
Sbjct: 303 MLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMD 337
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S KVS + K + IHVRA+RGQATDSHS+AER RREKI+KKM+ LQDLVPGC+
Sbjct: 173 SPNASKVSGSPKPD-----YIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCN 227
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
K G AGML+EIINYV SLQ QVEFLS++LA D N++T
Sbjct: 228 KITGKAGMLDEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDT 270
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 88/118 (74%), Gaps = 2/118 (1%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S++GK+ +SN ++ + IHVRA+RGQATDSHS+AERVRREKIN++M+ LQDLVP C+
Sbjct: 276 SKKGKEKNSNVSQKD--DNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCN 333
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEAL 250
K G A ML+EIINYV SLQ+QVEFLSM+LA D NI+ +++ G+ S + +
Sbjct: 334 KVTGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPKLDFNIDNFFAKEMSGSFSSKGM 391
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 25/155 (16%)
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGKK--VSSN----EKEEGNPER------- 151
S+ + K + S E+ G+ + +K +S++ VSS+ EKE+ +P+R
Sbjct: 177 SSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEEN 236
Query: 152 ------------IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A
Sbjct: 237 GDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 296
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
ML+EIINYV SLQ QVEFLSM+L++ + D N++
Sbjct: 297 MLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMD 331
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 25/155 (16%)
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGKK--VSSN----EKEEGNPER------- 151
S+ + K + S E+ G+ + +K +S++ VSS+ EKE+ +P+R
Sbjct: 183 SSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEEN 242
Query: 152 ------------IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A
Sbjct: 243 GDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 302
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
ML+EIINYV SLQ QVEFLSM+L++ + D N++
Sbjct: 303 MLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMD 337
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 76/99 (76%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K V N K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 40 KSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 99
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
A ML+EIINYV SLQ QVEFLSM+LAA + N+E+
Sbjct: 100 KAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVES 138
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 121/222 (54%), Gaps = 21/222 (9%)
Query: 38 LEYFNTPNFSLATPLAHQQPEFL--AGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYE 95
+F LA AH P FL G + +S S +T S ++ + ++
Sbjct: 4 FPHFTQMEHGLAGASAHGTPSFLFCHGAATADSAS-LETSSGVLDTSPQGTASDD----- 57
Query: 96 SSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHV 155
R+ E S S S +++ E+ T K R R SS E +E P+ IHV
Sbjct: 58 KKPRKPREDSASFSSAHSKDSNSKES---TKKKGGKRDR-----SSKEVDEEEPKGYIHV 109
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AERVRRE+I+++MR LQ LVPGC K G A +L+EIINYV SLQNQV
Sbjct: 110 RARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQV 169
Query: 216 EFLSMELAAACS-----SNDLNIETESSRKTQGTNSHEALEM 252
EFLSM +A+ D + ++ ++K +G HEAL M
Sbjct: 170 EFLSMRIASLSPVLYGFGMDTDAFSDHTQKIEGMLHHEALGM 211
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 66/72 (91%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+KKM+CLQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 35 IHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQ 94
Query: 213 NQVEFLSMELAA 224
QVEF+SM+LAA
Sbjct: 95 RQVEFISMKLAA 106
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 91/127 (71%), Gaps = 10/127 (7%)
Query: 115 SASTSETQGDTYKNKKIRSRRG-KKVSSNEKEEGN------PERIIHVRAKRGQATDSHS 167
S T + +G+ KN K+++R V S E +G+ P+ IHVRA+RGQATDSHS
Sbjct: 99 SKITEQIKGN--KNTKLKNRENCDDVGSKENSKGSEIQNHKPD-YIHVRARRGQATDSHS 155
Query: 168 IAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACS 227
+AERVRREKI+++M+ LQDLVPGC+K G AGML+EIINYV SLQ QVEFLSM+LAA
Sbjct: 156 LAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 215
Query: 228 SNDLNIE 234
D NI+
Sbjct: 216 RLDFNID 222
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 10/153 (6%)
Query: 87 RGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRS-------RRGKKV 139
+G + + +S +++ + S SK C S S + + ++ K K +S ++GK
Sbjct: 192 KGKDASVSTTSAKDLLAKEDSASKR-CKSMSMEDGEENSGKGKAAQSSSENGGKKQGKDG 250
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
+S E P+ IHVRA+RG+ATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A
Sbjct: 251 ASKLPEP--PKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAV 308
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
ML+EIINYV SLQ QVEFLSM+LA D N
Sbjct: 309 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 341
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 10/153 (6%)
Query: 87 RGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRS-------RRGKKV 139
+G + + +S +++ + S SK C S S + + ++ K K +S ++GK
Sbjct: 192 KGKDASVSTTSAKDLLAKEDSASKR-CKSMSMEDGEENSGKGKAAQSSSENGGKKQGKDG 250
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
+S E P+ IHVRA+RG+ATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A
Sbjct: 251 ASKLPEP--PKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAV 308
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
ML+EIINYV SLQ QVEFLSM+LA D N
Sbjct: 309 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 341
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 75/93 (80%)
Query: 132 RSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGC 191
R R GKK S ++ EE P+ IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ LVPGC
Sbjct: 84 RKRGGKKHSRDQMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGC 143
Query: 192 HKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 144 DKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 176
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 79/105 (75%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
+K +E EEG+ E IHVRA+RGQAT+SHS+AERVRREKI+++MR LQ+LVPGC K G
Sbjct: 213 QKKDDSESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTG 272
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKT 241
A ML+EIINYV SLQ QVEFLSM+LA + N+E S+ +
Sbjct: 273 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVEQICSKDS 317
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K+ +N K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 236 KQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 295
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSN-DLNIETESSRK 240
A ML+EIINYV SLQ+QVEFLSM+LA+ ++ D N+++ S K
Sbjct: 296 KALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVDSLISSK 340
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 76/99 (76%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K V N K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 355 KSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 414
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
A ML+EIINYV SLQ QVEFLSM+LAA + N+E+
Sbjct: 415 KAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVES 453
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 90/122 (73%), Gaps = 2/122 (1%)
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINK 179
+T+ D KN + S ++ +N K P+ IHVRA+RGQATDSHS+AERVRREKI++
Sbjct: 182 KTEEDLKKNDE-NSAEERQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISE 240
Query: 180 KMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSN-DLNIETESS 238
+M+ LQDLVPGC+K G A ML+EIINYV SLQ+QVEFLSM+LA+ ++ D N+++ S
Sbjct: 241 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVDSLIS 300
Query: 239 RK 240
K
Sbjct: 301 SK 302
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 82/115 (71%), Gaps = 14/115 (12%)
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINK 179
ET DT K +++ N+K + IHVRA+RGQATDSHS+AERVRREKI++
Sbjct: 171 ETSADTSKGSEVQ---------NQKPD-----YIHVRARRGQATDSHSLAERVRREKISE 216
Query: 180 KMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
+M+ LQDL+PGC+K G AGML+EIINYV SLQ QVEFLSM+LAA D NI+
Sbjct: 217 RMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPGLDFNID 271
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 74/98 (75%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K+ N K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 245 KQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 304
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
A ML+EIINYV SLQ QVEFLSM+LA D N+E
Sbjct: 305 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNME 342
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 70/82 (85%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 143 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 202
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+LAA D NI+
Sbjct: 203 RQVEFLSMKLAAVNPRLDFNID 224
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 98/151 (64%), Gaps = 4/151 (2%)
Query: 99 REVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAK 158
+ V E S ++ T+ + + D K + SR+ + +K + E IH+RA+
Sbjct: 210 KNVQEGSQQLA-TLAAKQEKDDGDKDEPKRPIVTSRKSNGKQTEDKSDAPKEDYIHIRAR 268
Query: 159 RGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
GQAT+SHS+AERVRREKI+++M+ LQDLVPGC K +G A ML+EIINYV SLQ QVEFL
Sbjct: 269 SGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 328
Query: 219 SMELAAACSSNDLNIETESSR---KTQGTNS 246
SM+L+A + D NIE S+ ++QGT S
Sbjct: 329 SMKLSAVNPALDFNIERILSKDLFQSQGTAS 359
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 74/99 (74%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K+ N K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 354 KQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 413
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
A ML+EIINYV SLQ QVEFLSM+LA D N+E
Sbjct: 414 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEA 452
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 81/113 (71%), Gaps = 11/113 (9%)
Query: 123 GDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMR 182
GD +NK +N + P+ IHVRA+RGQATDSHS+AERVRREKI+++M+
Sbjct: 337 GDDIQNK-----------ANSRPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 385
Query: 183 CLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+LA+ + D N++T
Sbjct: 386 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNMDT 438
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 96/140 (68%), Gaps = 8/140 (5%)
Query: 95 ESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIH 154
E +VTEQ+++ K S+A+ + + T + +G +V N+K E IH
Sbjct: 159 EEGESKVTEQTSN--KNGKSNANKNNNRETTSAETSKDNSKGSEVQ-NQKPE-----YIH 210
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G AGML+EIINYV SLQ Q
Sbjct: 211 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQ 270
Query: 215 VEFLSMELAAACSSNDLNIE 234
VEFLSM+LAA D N++
Sbjct: 271 VEFLSMKLAAVNPRLDFNLD 290
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 74/99 (74%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K+ N K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 354 KQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 413
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
A ML+EIINYV SLQ QVEFLSM+LA D N+E
Sbjct: 414 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEA 452
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Query: 72 FQTDSRIVVPRVRTVRGNEDVLYESSRRE---VTEQSTSISKTMCSSASTSETQGDTYKN 128
F T+++ + + V N D L E E +TEQ+ +K++ ++ + + + N
Sbjct: 96 FDTETKDCNEKKKKVTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSN 155
Query: 129 KKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
SS +E IHVRA+RGQATDSHSIAERVRREKI+++M+ LQDLV
Sbjct: 156 D----------SSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLV 205
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
PGC K G AGML+EIINYV SLQ Q+EFLSM+LA D +++
Sbjct: 206 PGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMD 251
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 232 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 291
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKT 241
QVEFLSM+LAA D NI+ +++T
Sbjct: 292 RQVEFLSMKLAAVNPRLDFNIDNLIAKET 320
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 86/114 (75%), Gaps = 5/114 (4%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
KK +SN E P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 11 KKDNSNPPEP--PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 68
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSR---KTQGTNSH 247
A ML+EIINYV SLQ QVEFLSM++A ++N+ET S+ +++G+ H
Sbjct: 69 KAVMLDEIINYVQSLQRQVEFLSMKMATVNPKMEINMETFLSKDIFQSRGSMPH 122
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 82/115 (71%), Gaps = 14/115 (12%)
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINK 179
ET DT K +++ N+K + IHVRA+RGQATDSHS+AERVRREKI++
Sbjct: 171 ETSADTSKGSEVQ---------NQKPD-----YIHVRARRGQATDSHSLAERVRREKISE 216
Query: 180 KMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
+M+ LQDL+PGC+K G AGML+EIINYV SLQ QVEFLSM+LAA D NI+
Sbjct: 217 RMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNID 271
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 70/82 (85%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 254 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 313
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+LAA D NI+
Sbjct: 314 RQVEFLSMKLAAVNPRLDFNID 335
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S+ KVS +K + IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+
Sbjct: 174 SKENSKVSDVQKTD-----YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 228
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
K G AGML+EIINYV SLQ QVEFLSM+LA D NI+
Sbjct: 229 KITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNID 270
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S+ KVS +K + IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+
Sbjct: 174 SKENSKVSDVQKTD-----YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 228
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
K G AGML+EIINYV SLQ QVEFLSM+LA D NI+
Sbjct: 229 KITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNID 270
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 73/90 (81%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+KKM+ LQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 200 IHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQ 259
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQ 242
QVEFLSM+LAA + NI+ S ++ +
Sbjct: 260 RQVEFLSMKLAALNPRPEFNIDNFSGKEVR 289
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 81/116 (69%), Gaps = 8/116 (6%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
+G E IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EII
Sbjct: 67 DGAKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 126
Query: 206 NYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYG 261
NYV SLQ QVEFLSM+LAA + D NIE G S + L++ + A G
Sbjct: 127 NYVQSLQRQVEFLSMKLAAVNPTLDFNIE--------GLLSKDLLQLRGGSSSAIG 174
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 76/101 (75%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K+ N K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 328 KQNKDNTKLPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 387
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETES 237
A ML+EIINYV SLQ QVEFLSM+LA D+N+E S
Sbjct: 388 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDVNMEALS 428
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 98/142 (69%), Gaps = 6/142 (4%)
Query: 118 TSETQG---DTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRR 174
+ ET G DT K K+ + K+ +N K P+ IHVRA+RGQATDSHS+AERVRR
Sbjct: 329 SDETNGSDKDTAKEKEEENGNQKQNKNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRR 388
Query: 175 EKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
EKI+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+L++ ++N+E
Sbjct: 389 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSSVNPRMEINME 448
Query: 235 TESSR---KTQGTNSHEALEME 253
T S+ +++G+ H ++
Sbjct: 449 TLLSKDIFQSRGSMPHSLYPLD 470
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
Query: 126 YKNKKIRSRRGKKVSSNEKEE-GNP-ERIIHVRAKRGQATDSHSIAERVRREKINKKMRC 183
Y+ K+ GK K+ G+P E IHVRA+RGQAT+SHS+AERVRREKI+++M+
Sbjct: 222 YEPKRSSVAPGKSSRKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKY 281
Query: 184 LQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA+ + DLNIE+
Sbjct: 282 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDLNIES 333
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
KN ++G + S KEE IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQD
Sbjct: 384 KNTGKHGKQGAQASDPPKEE-----YIHVRARRGQATNSHSLAERVRREKISERMKFLQD 438
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
LVPGC K G A ML+EIINYV SLQ QVEFLSM+LA D NIE
Sbjct: 439 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 486
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Query: 72 FQTDSRIVVPRVRTVRGNEDVLYESSRRE---VTEQSTSISKTMCSSASTSETQGDTYKN 128
F T+++ + + + N D L E E +TEQ+ +K++ ++ + + + N
Sbjct: 96 FDTETKDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSN 155
Query: 129 KKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
SS +E IHVRA+RGQATDSHSIAERVRREKI+++M+ LQDLV
Sbjct: 156 D----------SSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLV 205
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
PGC K G AGML+EIINYV SLQ Q+EFLSM+LA D +++
Sbjct: 206 PGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMD 251
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 25/155 (16%)
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN------EKEEGNPERI------ 152
S+ + K + S E+ G+ + +K +S++ + + EKE+ +P+R
Sbjct: 183 SSPVLKPLVSHVPAGESSGEYSRKRKAKSKQNSPSTVSPSKEIEEKEDSDPKRCKKSEDN 242
Query: 153 -------------IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A
Sbjct: 243 GDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 302
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
ML+EIINYV SLQ QVEFLSM+L++ + D N++
Sbjct: 303 MLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMD 337
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 94/144 (65%), Gaps = 9/144 (6%)
Query: 92 VLYESS---RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGN 148
VL E S R + TE+S + ++ +++ + KK +GK SS E
Sbjct: 219 VLQEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKK----QGKDSSSKPPEP-- 272
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ IHVRA+RG+ATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A ML+EIINYV
Sbjct: 273 PKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYV 332
Query: 209 HSLQNQVEFLSMELAAACSSNDLN 232
SLQ QVEFLSM+LA D N
Sbjct: 333 QSLQRQVEFLSMKLATVNPQLDFN 356
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Query: 72 FQTDSRIVVPRVRTVRGNEDVLYESSRRE---VTEQSTSISKTMCSSASTSETQGDTYKN 128
F T+++ + + + N D L E E +TEQ+ +K++ ++ + + + N
Sbjct: 96 FDTETKDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSN 155
Query: 129 KKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
SS +E IHVRA+RGQATDSHSIAERVRREKI+++M+ LQDLV
Sbjct: 156 D----------SSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLV 205
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
PGC K G AGML+EIINYV SLQ Q+EFLSM+LA D +++
Sbjct: 206 PGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMD 251
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Query: 72 FQTDSRIVVPRVRTVRGNEDVLYESSRRE---VTEQSTSISKTMCSSASTSETQGDTYKN 128
F T+++ + + + N D L E E +TEQ+ +K++ ++ + + + N
Sbjct: 96 FDTETKDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSN 155
Query: 129 KKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
SS +E IHVRA+RGQATDSHSIAERVRREKI+++M+ LQDLV
Sbjct: 156 D----------SSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLV 205
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
PGC K G AGML+EIINYV SLQ Q+EFLSM+LA D +++
Sbjct: 206 PGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMD 251
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 93/146 (63%), Gaps = 4/146 (2%)
Query: 89 NEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGN 148
N V E+++ ++QS SE ++ NK +R K SS+ ++G
Sbjct: 241 NGQVNSEAAQSHRSQQSEEEPDNNGDKKRNSEQSPNSPGNKTNSGKRQGKQSSDLPKDG- 299
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 300 ---YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 356
Query: 209 HSLQNQVEFLSMELAAACSSNDLNIE 234
SLQ QVEFLSM+LA D N+E
Sbjct: 357 QSLQRQVEFLSMKLATVNPQMDFNLE 382
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 91/140 (65%), Gaps = 13/140 (9%)
Query: 103 EQSTSISKTMCSSASTSETQ--GD------TYKNKKIRSRRGKKVSSNEKEEGNPERIIH 154
+Q+ ++ + + ETQ GD T K+ + ++G S KEE IH
Sbjct: 95 DQAKGTPQSAEPAKGSPETQQKGDQKPTSTTSKDAGKQGKQGSLGSDQPKEE-----YIH 149
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ Q
Sbjct: 150 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 209
Query: 215 VEFLSMELAAACSSNDLNIE 234
VEFLSM+LA DLNIE
Sbjct: 210 VEFLSMKLATVNPRLDLNIE 229
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 90/135 (66%), Gaps = 6/135 (4%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRA 157
R + TE+S + ++ +++ + KK +GK SS E P+ IHVRA
Sbjct: 226 RCKSTEESNAAAEENSGKGKAAQSNSENGGGKK----QGKDSSSKPPEP--PKDYIHVRA 279
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+RG+ATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEF
Sbjct: 280 RRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEF 339
Query: 218 LSMELAAACSSNDLN 232
LSM+LA D N
Sbjct: 340 LSMKLATVNPQLDFN 354
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 73/99 (73%)
Query: 136 GKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
GK KE E IHVRA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K
Sbjct: 222 GKSKGKGAKESSEKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVT 281
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 282 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 320
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 72/88 (81%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 235 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 294
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRK 240
QVEFLSM+LAA D N + +R+
Sbjct: 295 RQVEFLSMKLAAVNPRLDFNFDNLFARE 322
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
KN ++G + S KEE IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQD
Sbjct: 279 KNTGKHGKQGAQASDPPKEE-----YIHVRARRGQATNSHSLAERVRREKISERMKFLQD 333
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
LVPGC K G A ML+EIINYV SLQ QVEFLSM+LA D NIE
Sbjct: 334 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 381
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 93/140 (66%), Gaps = 24/140 (17%)
Query: 120 ETQGDTYKNKKIRSRRGKK----VSSNEKE--EGNP------------------ERIIHV 155
E G+ + KKI++ G++ V + E+E EG P + IHV
Sbjct: 232 EGSGEDFNAKKIKANEGERNENGVRNMEEEIKEGTPNAGEEKQNKSDSKPPEPQKDYIHV 291
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QV
Sbjct: 292 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 351
Query: 216 EFLSMELAAACSSNDLNIET 235
EFLSM+L++ + DL+IE+
Sbjct: 352 EFLSMKLSSVNTKMDLSIES 371
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 87/131 (66%)
Query: 104 QSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQAT 163
QS++++ + + S+ +G+ + G+ KE E IHVRA+RGQAT
Sbjct: 190 QSSNVAADSANESVQSKDKGEESSPATGTTTGGRSKGKGAKEGSEKEDYIHVRARRGQAT 249
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+SHS+AER+RREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 250 NSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 309
Query: 224 AACSSNDLNIE 234
DLNIE
Sbjct: 310 TVNPRLDLNIE 320
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 136 GKKVSSNEKE--EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
GK EKE E E IH+RA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K
Sbjct: 225 GKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 284
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 285 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 325
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 79/108 (73%), Gaps = 6/108 (5%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREK 176
S SE GD+ S R K +S ++ + + IHVRA+RGQATDSHS+AERVRREK
Sbjct: 37 SASENSGDSA------SPRSLKATSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREK 90
Query: 177 INKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
I+++M+ LQDLVPGC K G A ML+EIINYV SLQ Q+EFLSM+LAA
Sbjct: 91 ISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLAA 138
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
+N R ++GK+ ++ E P+ IHVRA+RG+ATDSHS+AERVRREKI+++M+ LQD
Sbjct: 253 ENGGGRKQQGKESATKPPAEA-PKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQD 311
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
LVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA D N
Sbjct: 312 LVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 357
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 80/110 (72%), Gaps = 5/110 (4%)
Query: 125 TYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCL 184
T K + + K+ S ++KE+ IHVRA+RGQAT+SHS+AER+RREKI+++M+ L
Sbjct: 231 TTGPGKSKGKGAKETSESQKED-----YIHVRARRGQATNSHSLAERLRREKISERMKLL 285
Query: 185 QDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
QDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 286 QDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 335
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 136 GKKVSSNEKE--EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
GK EKE E E IH+RA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K
Sbjct: 235 GKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 294
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 295 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 335
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 6/111 (5%)
Query: 127 KNKKIRSRR--GKKVSSNEKEEGNP-ERIIHVRAKRGQATDSHSIAERVRREKINKKMRC 183
K + SR+ GK+ N G+P E IHVRA+RGQAT+SHS+AERVRREKI+++M+
Sbjct: 230 KRSSVASRKSSGKQTKDNA---GSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKY 286
Query: 184 LQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA+ + D NIE
Sbjct: 287 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 337
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEG----NPER--IIHVRAKRGQATDSHSIAERVR 173
+ GD +N + K S++ K++G +P + IHVRA+RGQAT+SHS+AERVR
Sbjct: 261 DNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVR 320
Query: 174 REKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNI 233
REKI+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+LA D N+
Sbjct: 321 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNL 380
Query: 234 E 234
E
Sbjct: 381 E 381
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEG----NPER--IIHVRAKRGQATDSHSIAERVR 173
+ GD +N + K S++ K++G +P + IHVRA+RGQAT+SHS+AERVR
Sbjct: 262 DNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVR 321
Query: 174 REKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNI 233
REKI+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+LA D N+
Sbjct: 322 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNL 381
Query: 234 E 234
E
Sbjct: 382 E 382
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEG----NPER--IIHVRAKRGQATDSHSIAERVR 173
+ GD +N + K S++ K++G +P + IHVRA+RGQAT+SHS+AERVR
Sbjct: 262 DNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVR 321
Query: 174 REKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNI 233
REKI+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+LA D N+
Sbjct: 322 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNL 381
Query: 234 E 234
E
Sbjct: 382 E 382
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 87/132 (65%), Gaps = 13/132 (9%)
Query: 111 TMCSSASTSETQ--GD------TYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQA 162
T S+ + ETQ GD T K + ++G + S KEE IHVRA+RGQA
Sbjct: 322 TPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQGSDQPKEE-----YIHVRARRGQA 376
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
T+SHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+L
Sbjct: 377 TNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 436
Query: 223 AAACSSNDLNIE 234
A D NIE
Sbjct: 437 ATVNPRLDFNIE 448
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 69/82 (84%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 247 IHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 306
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+LAA D N++
Sbjct: 307 RQVEFLSMKLAAVNPRLDFNVD 328
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S+N K P+ IHVRA+RGQATDSHS+AERVRREKI ++M+ LQDLVPGC+K G A
Sbjct: 286 SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKAL 345
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSN-DLNIETESSRKTQGTNSHEALEME 253
ML+EIINYV SLQ QVEFLSM+L++ + D N++ S+ +S+ L E
Sbjct: 346 MLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEE 400
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S+N K P+ IHVRA+RGQATDSHS+AERVRREKI ++M+ LQDLVPGC+K G A
Sbjct: 286 SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKAL 345
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSN-DLNIETESSRKTQGTNSHEALEME 253
ML+EIINYV SLQ QVEFLSM+L++ + D N++ S+ +S+ L E
Sbjct: 346 MLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEE 400
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 86/128 (67%), Gaps = 10/128 (7%)
Query: 113 CSSASTSETQGD-TYKNKKIRS-------RRGKKVSSNEKEEGNPERIIHVRAKRGQATD 164
C SA S D + K K +S ++GK +S E P+ IHVRA+RG+ATD
Sbjct: 232 CKSADESNGAEDNSTKGKAAQSNSENGGKKQGKDSTSKPPEP--PKDYIHVRARRGEATD 289
Query: 165 SHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
SHS+AERVRREKI+++M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 290 SHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLAT 349
Query: 225 ACSSNDLN 232
D N
Sbjct: 350 VNPQLDFN 357
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 4/100 (4%)
Query: 136 GKKVSSNEKEEGNP-ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK++ N G+P E IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC K
Sbjct: 243 GKQIKDNA---GSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKV 299
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA+ + D NIE
Sbjct: 300 TGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 339
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 74/100 (74%)
Query: 135 RGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
+ K + E E E IHVRA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K
Sbjct: 233 KSKGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 292
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 293 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 332
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Query: 101 VTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRG 160
V + K + + +S G +N+K +GK N K P +HVRA+RG
Sbjct: 144 VEGSPVKLPKPEQAGSDSSVEDGGGAQNQKPPPGKGK----NAKPVEPPRDYVHVRARRG 199
Query: 161 QATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
QATDSHS+AERVRRE+I+++M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM
Sbjct: 200 QATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 259
Query: 221 ELA 223
+LA
Sbjct: 260 KLA 262
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 4/100 (4%)
Query: 136 GKKVSSNEKEEGNP-ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK++ N G+P E IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC K
Sbjct: 243 GKQIKDNA---GSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKV 299
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA+ + D NIE
Sbjct: 300 TGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 339
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%), Gaps = 14/142 (9%)
Query: 122 QGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKM 181
+G T R R K+V +E+E P+ IHVRA+RGQATDSHS+AERVRRE+I+++M
Sbjct: 90 KGSTKNRGGKRGRSSKEVEDDEEE---PKGYIHVRARRGQATDSHSLAERVRRERISERM 146
Query: 182 RCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAAC---------SSNDLN 232
R LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM++A+ +++ +
Sbjct: 147 RVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAFS 206
Query: 233 IETESSRKTQGTNS--HEALEM 252
+ +++K +G HEAL M
Sbjct: 207 TDDHTTQKIEGMLQLHHEALAM 228
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 72/92 (78%)
Query: 132 RSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGC 191
+ +GK S + ++ P +HVRA+RGQATDSHS+AERVRREKI KM+ LQDLVPGC
Sbjct: 154 KQAKGKSSKSKQADDEPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGC 213
Query: 192 HKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+K +G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 214 NKVIGKALMLDEIINYVQSLQQQVEFLSMKLA 245
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
Query: 132 RSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGC 191
+ ++G + S KEE IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC
Sbjct: 353 QGKQGSQASDPPKEE-----YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 407
Query: 192 HKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
K G A ML+EIINYV SLQ QVEFLSM+LA D NIE
Sbjct: 408 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 450
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 94/153 (61%), Gaps = 16/153 (10%)
Query: 87 RGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKK-----IRSRRGKKVSS 141
R NEDVL T + M S S+ E D K K+ R ++GK S+
Sbjct: 112 RSNEDVL--------GMIGTDQDQGMPSVDSSKERGEDDAKGKEETPPATRKKKGKGASA 163
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
+ E E IHVRA++GQAT+ HS+AER+RREKI+++M+ LQDLVPGC K G A ML
Sbjct: 164 ADGES---ESYIHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVML 220
Query: 202 EEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
+EIINYV SLQ QVEFLSM+LAA LNI+
Sbjct: 221 DEIINYVQSLQRQVEFLSMKLAAVNPQLGLNIK 253
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 89/137 (64%), Gaps = 4/137 (2%)
Query: 100 EVTEQSTSISKTMCSSASTSETQG--DTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRA 157
+V E I++T + A + G + K ++GK+ S + + E IHVRA
Sbjct: 286 QVKEAPQQINETAKNGAFNQQKGGQNPSSTTSKPAGKQGKQDS--QPSDAPKEEYIHVRA 343
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+RGQAT+SHS+AERVRREKI+++MR LQDLVPGC K G A ML+EIINYV SLQ QVEF
Sbjct: 344 RRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 403
Query: 218 LSMELAAACSSNDLNIE 234
LSM+LA D NIE
Sbjct: 404 LSMKLATVNPRLDFNIE 420
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK SS E P+ IHVRA+RG+ATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 55 KQGKDSSSKPPEP--PKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 112
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
+G A ML+EIINYV SLQ QVEFLSM+LA D N
Sbjct: 113 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 151
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 89/137 (64%), Gaps = 4/137 (2%)
Query: 100 EVTEQSTSISKTMCSSASTSETQG--DTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRA 157
+V E I++T + A + G + K ++GK+ S + + E IHVRA
Sbjct: 286 QVKEAPQQINETAKNGAFNQQKGGQNPSSTTSKPAGKQGKQDS--QPSDAPKEEYIHVRA 343
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+RGQAT+SHS+AERVRREKI+++MR LQDLVPGC K G A ML+EIINYV SLQ QVEF
Sbjct: 344 RRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEF 403
Query: 218 LSMELAAACSSNDLNIE 234
LSM+LA D NIE
Sbjct: 404 LSMKLATVNPRLDFNIE 420
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 67/79 (84%)
Query: 147 GNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
GN + IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIIN
Sbjct: 25 GNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIIN 84
Query: 207 YVHSLQNQVEFLSMELAAA 225
YV SLQ QVEFLSM+LAA
Sbjct: 85 YVQSLQRQVEFLSMKLAAV 103
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 69/82 (84%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 247 IHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 306
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+LAA D N++
Sbjct: 307 RQVEFLSMKLAAVNPRLDFNVD 328
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK +S E P+ IHVRA+RG+ATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 233 KQGKDGASKPPEP--PKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 290
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
+G A ML+EIINYV SLQ QVEFLSM+LA D N
Sbjct: 291 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 329
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 75/90 (83%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK +S++ P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 153 KQGKGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNK 212
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 213 VVGKALMLDEIINYVQSLQQQVEFLSMKLA 242
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 75/90 (83%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK +S++ P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 153 KQGKGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNK 212
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 213 VVGKALMLDEIINYVQSLQQQVEFLSMKLA 242
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 82/118 (69%), Gaps = 12/118 (10%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREK 176
ST++ G KN K+ G + S KEE IHVRA+RGQAT+SHS+AERVRREK
Sbjct: 195 STAKASG---KNAKL----GSQASDPPKEE-----YIHVRARRGQATNSHSLAERVRREK 242
Query: 177 INKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
I+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA D NIE
Sbjct: 243 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 300
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 93/138 (67%), Gaps = 5/138 (3%)
Query: 102 TEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGN--PERI--IHVRA 157
T+ + + +T+ S + T + K K+ R ++G+ + K E N E++ +HVRA
Sbjct: 145 TDSNPNPLQTLISDPTVENTNQRSAKRKE-REKKGRGSTKKSKNESNEDAEKLPYVHVRA 203
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC+K G A +L+EIIN+V SLQ QVEF
Sbjct: 204 RRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEF 263
Query: 218 LSMELAAACSSNDLNIET 235
LSM LAA D NIE+
Sbjct: 264 LSMRLAAVNPRVDFNIES 281
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 82/109 (75%), Gaps = 6/109 (5%)
Query: 116 ASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRR 174
AS SE GD+ I R K +++++ + P++ IHVRA+RGQATDSHS+AERVRR
Sbjct: 29 ASASENSGDS-----ISPRSTLKGATSKRPQDFPKQDYIHVRARRGQATDSHSLAERVRR 83
Query: 175 EKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
EKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 84 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 132
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
N K P+ IHVRA+RGQATDSHS+AERVRREKI+++M LQDLVPGC+K G AGML
Sbjct: 182 NSKASEKPD-YIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGML 240
Query: 202 EEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
+EIINYV SLQ QVEFLSM+LAA D +++
Sbjct: 241 DEIINYVQSLQRQVEFLSMKLAAVNPRLDFSMD 273
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
K+ S+ K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G
Sbjct: 272 KQNMSSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 331
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKT-QGTNS--HEALEME 253
A ML+EIINYV SLQ QVEFLSM+L++ + D + E+ S+ Q NS ++
Sbjct: 332 KALMLDEIINYVRSLQRQVEFLSMKLSSVNTRLDFSTESLISKDIFQSNNSLAQPLFPLD 391
Query: 254 IWAKEAYGE 262
A+ YG+
Sbjct: 392 SSAQAFYGQ 400
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 71/91 (78%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATD HS+AER RREKI+KKM+ LQDLVPGC+K G AGML+EIINYV SLQ
Sbjct: 185 IHVRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQ 244
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+LA +L +E S ++ Q
Sbjct: 245 RQVEFLSMKLAVLNPELELAVEDLSVKQFQA 275
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 140 SSNEKE-EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
SSN KE E IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A
Sbjct: 151 SSNSKENEDQKLDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 210
Query: 199 GMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
GML+EIINYV SLQ QVEFLSM+LA + + N
Sbjct: 211 GMLDEIINYVQSLQRQVEFLSMKLATVNPALEFN 244
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 4/100 (4%)
Query: 136 GKKVSSNEKEEGNP-ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK++ N G+P E IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC K
Sbjct: 300 GKQIKDNA---GSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKV 356
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA+ + D NIE
Sbjct: 357 TGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 396
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 4/100 (4%)
Query: 136 GKKVSSNEKEEGNP-ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK++ N G+P E IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC K
Sbjct: 351 GKQIKDNA---GSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKV 407
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA+ + D NIE
Sbjct: 408 TGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 447
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
Query: 115 SASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-----IIHVRAKRGQATDSHSIA 169
SA+ S Q K ++ +S+RGK+ + +E+ E IHVRA+RGQATDSHS+A
Sbjct: 77 SATLSSAQSKDCKQQESKSKRGKRPNKETEEKSTTEDEATKGYIHVRARRGQATDSHSLA 136
Query: 170 ERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
ERVRRE+I+++MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 137 ERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 191
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 68/82 (82%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHSIAERVRREKI+++M+ LQDLVPGC K G AGML+EIINYV SLQ
Sbjct: 167 IHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQ 226
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
Q+EFLSM+LA D +++
Sbjct: 227 RQIEFLSMKLAVVNPRPDFDMD 248
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 63/68 (92%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +IHVRAKRGQATDSHS+AERVRRE+IN+K+RCLQDLVPGC+K MGMA ML+ IINYV
Sbjct: 115 PKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 174
Query: 209 HSLQNQVE 216
SLQNQ+E
Sbjct: 175 QSLQNQIE 182
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 4/100 (4%)
Query: 136 GKKVSSNEKEEGNP-ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK+ N G+P E IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC K
Sbjct: 232 GKQAKDNA---GSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKV 288
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA+ + D NI+
Sbjct: 289 TGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNID 328
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 71/92 (77%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
E E E IHVRA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K G A ML+
Sbjct: 236 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 203 EIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 296 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 327
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC+K G AGML+EIINYV SLQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+L+ + +I+ S+++ Q
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQFQA 229
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC+K G AGML+EIINYV SLQ
Sbjct: 135 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 194
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+L+ + +I+ S+++ Q
Sbjct: 195 QQVEFLSMKLSVINPELECHIDDLSAKQFQA 225
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 135 RGKKVSSNEKE-----EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
RGK+ + KE E E IHVRA+RGQAT+SHS+AERVRREKI+++MR LQ+LVP
Sbjct: 217 RGKQAAKQAKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVP 276
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETE 236
GC+K G A ML+EIINYV SLQ QVEFLSM+LA + +LNI+ E
Sbjct: 277 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV--NPELNIDIE 321
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC+K G AGML+EIINYV SLQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+L+ + +I+ S+++ Q
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQFQA 229
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%), Gaps = 8/108 (7%)
Query: 135 RGKKVSSNEKE------EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
RGK KE E E IHVRA+RGQAT+SHS+AERVRREKI+++MR LQ+LV
Sbjct: 53 RGKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELV 112
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETE 236
PGC+K G A ML+EIINYV SLQ QVEFLSM+LA + D+N++ E
Sbjct: 113 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV--NPDVNVDIE 158
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 71/91 (78%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC K G AGML+EIINYV SLQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQ 198
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+L+ + +I S+++ Q
Sbjct: 199 QQVEFLSMKLSVLNPELEFHINELSTKQFQA 229
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC+K G AGML+EIINYV SLQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+L+ + +I+ S+++ Q
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQFQA 229
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 28/165 (16%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGN--------- 148
RR +++ + + +S+ ET+ + +G +V SNEK++
Sbjct: 319 RRVLSKAKAKDTPSAVASSGGRETKSLEADESPTKRYKGAEVGSNEKDDAKSKAEQSTIL 378
Query: 149 -------------------PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVP
Sbjct: 379 STGESSPKQTKDIVKTPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 438
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
GC K G A ML+EIINYV SLQ QVEFLSM+LA D N++
Sbjct: 439 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNMD 483
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC+K G AGML+EIINYV SLQ
Sbjct: 123 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 182
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+L+ + +I+ S+++ Q
Sbjct: 183 QQVEFLSMKLSVINPELECHIDDLSAKQFQA 213
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC+K G AGML+EIINYV SLQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+L+ + +I+ S+++ Q
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQFQA 229
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 80/112 (71%), Gaps = 6/112 (5%)
Query: 118 TSETQGDTYKN-----KKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERV 172
T +T+G +N + + R+ KK KEE P IHVRA+RGQATDSHS+AERV
Sbjct: 95 TGKTRGRKARNSNNSKEGVEGRKSKKQKRGSKEEP-PTDYIHVRARRGQATDSHSLAERV 153
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
RREKI+++MR LQ+LVPGC K G A ML+EIINYV +LQ QVEFLSM+L +
Sbjct: 154 RREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTS 205
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 102 TEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQ 161
TE+ + SS G+T + K S N+K + IHVRA+RGQ
Sbjct: 137 TEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLD-----YIHVRARRGQ 191
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
ATD HS+AER RREKI+KKM+ LQD+VPGC+K G AGML+EIINYV LQ QVEFLSM+
Sbjct: 192 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMK 251
Query: 222 LAAACSSNDLNIETESSRKTQGTN 245
LA +L +E S ++ TN
Sbjct: 252 LAVLNPELELAVEDVSVKQAYFTN 275
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 92/142 (64%), Gaps = 23/142 (16%)
Query: 136 GKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK VS N P++ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K
Sbjct: 106 GKAVSKNIPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKV 165
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACS---------------------SNDLNI 233
+G A +L+EIINY+ SLQ QVEFLSM+L A + + L
Sbjct: 166 IGKASVLDEIINYIQSLQCQVEFLSMKLEAVNAQANQGVEVFPAKDYGSQTYNTAPGLTF 225
Query: 234 ETESSRK-TQGTNSHEALEMEI 254
+T++SR+ QGT++ E L M+I
Sbjct: 226 DTQTSREYAQGTSTSEWLHMQI 247
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 73/91 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC+K G AGML+EIINYV SLQ
Sbjct: 123 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 182
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+L+ + +I+ S+++ Q
Sbjct: 183 QQVEFLSMKLSVINPELECHIDDLSAKQFQA 213
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 79/120 (65%), Gaps = 23/120 (19%)
Query: 129 KKIRSRRGKKVSSNEKEEGN-----------------------PERIIHVRAKRGQATDS 165
KK ++R G ++SN + +GN P IHVRA+RGQATDS
Sbjct: 98 KKRKTRNGSSLTSNPQSKGNGGLKEEDKAKEEKKEQRKCPEEPPTGYIHVRARRGQATDS 157
Query: 166 HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
HS+AERVRREKI+++M+ LQ LVPGC K G A ML+EIINYV SLQNQVEFLSM+LA+
Sbjct: 158 HSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASV 217
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 84/120 (70%), Gaps = 5/120 (4%)
Query: 113 CSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERV 172
C+ +++ + KK +GK +++ E P+ IHVRA+RG+ATDSHS+AERV
Sbjct: 233 CAKGKAAQSSSENGGGKK----QGKDAGASKLPE-PPKDYIHVRARRGEATDSHSLAERV 287
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
RREKI+++M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA D N
Sbjct: 288 RREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 347
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 88/120 (73%), Gaps = 4/120 (3%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREK 176
S S+ +KN + + K+ S NE+E E+ IH+RA+RGQAT+SHS+AERVRREK
Sbjct: 12 SGSDQSQKKHKNDQSKETMNKESSQNEEEPK--EKYIHMRARRGQATNSHSLAERVRREK 69
Query: 177 INKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETE 236
I+++MR LQ+LVPGC+K G A ML+EIINY+ SLQ QVEFLSM+LA + D+NI+ +
Sbjct: 70 ISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFLSMKLATV--NPDINIDID 127
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 69/82 (84%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ
Sbjct: 14 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 73
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+LAA D+N++
Sbjct: 74 RQVEFLSMKLAAVNPRLDINLD 95
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ IHVRA+RGQATDSHS+AERVRREKI ++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 293 PKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYV 352
Query: 209 HSLQNQVEFLSMELAAACSSN-DLNIETESSRKTQGTNSHEALEME 253
SLQ QVEFLSM+L++ + D N++ S+ +S+ L E
Sbjct: 353 QSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEE 398
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 71/92 (77%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
E E E IHVRA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K G A ML+
Sbjct: 236 ETYESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 203 EIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 296 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 327
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 89/146 (60%), Gaps = 4/146 (2%)
Query: 108 ISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHS 167
+ K + + +S G K +GK N K P +HVRA+RGQATDSHS
Sbjct: 151 LPKPEQAGSDSSVEDGGAQNQKPPPPVKGK----NAKPVEPPRDYVHVRARRGQATDSHS 206
Query: 168 IAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACS 227
+AERVRRE+I+++M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 207 LAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP 266
Query: 228 SNDLNIETESSRKTQGTNSHEALEME 253
+ N+ T + G ++ +E
Sbjct: 267 LDLSNLPTLLQKDACGASASSVFSLE 292
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 77/108 (71%), Gaps = 9/108 (8%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
KN K+ G + S KEE IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQD
Sbjct: 339 KNAKL----GSQASDPPKEE-----YIHVRARRGQATNSHSLAERVRREKISERMKFLQD 389
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
LVPGC K G A ML+EIINYV SLQ QVEFLSM+LA D NIE
Sbjct: 390 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIE 437
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Query: 102 TEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQ 161
TE+ + SS G+T + K S N+K + IHVRA+RGQ
Sbjct: 120 TEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLD-----YIHVRARRGQ 174
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
ATD HS+AER RREKI+KKM+ LQD+VPGC+K G AGML+EIINYV LQ QVEFLSM+
Sbjct: 175 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMK 234
Query: 222 LAAACSSNDLNIETESSRKTQG 243
LA +L +E S ++ Q
Sbjct: 235 LAVLNPELELAVEDVSVKQFQA 256
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 74/97 (76%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RG+ATD HS+AER RREKI+KKM+CLQD+VPGC+K G AGML+EIINYV SLQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEA 249
QVEFLSM+L+ + +I+ S+++ T E
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQAYFTGPPEG 235
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 84/126 (66%), Gaps = 7/126 (5%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRA 157
R E+ T+ K A + + D + KK + + K V P+ +HVRA
Sbjct: 140 RTGDAEKKTAPVKPKAEQARSGSSVEDYGEPKKGKGKNAKPVEP-------PKDYVHVRA 192
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+RGQATDSHS+AERVRRE+I+++M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEF
Sbjct: 193 RRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 252
Query: 218 LSMELA 223
LSM+LA
Sbjct: 253 LSMKLA 258
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 71/92 (77%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
E E E IHVRA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K G A ML+
Sbjct: 617 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 676
Query: 203 EIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 677 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 708
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Query: 102 TEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQ 161
TE+ + SS G+T + K S N+K + IHVRA+RGQ
Sbjct: 137 TEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLD-----YIHVRARRGQ 191
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
ATD HS+AER RREKI+KKM+ LQD+VPGC+K G AGML+EIINYV LQ QVEFLSM+
Sbjct: 192 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMK 251
Query: 222 LAAACSSNDLNIETESSRKTQG 243
LA +L +E S ++ Q
Sbjct: 252 LAVLNPELELAVEDVSVKQFQA 273
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 131 IRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPG 190
+ + KK KEE P+ IHVRA+RGQATDSHS+AERVRREKI+++MR LQ+LVPG
Sbjct: 114 VEGTKSKKQKRGSKEEP-PKDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPG 172
Query: 191 CHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
C K G A ML+EIINYV +LQNQVEFLSM+L +
Sbjct: 173 CDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTS 206
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%), Gaps = 8/108 (7%)
Query: 135 RGKKVSSNEKE------EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
RGK KE E E IHVRA+RGQAT+SHS+AERVRREKI+++MR LQ+LV
Sbjct: 206 RGKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELV 265
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETE 236
PGC+K G A ML+EIINYV SLQ QVEFLSM+LA + D+N++ E
Sbjct: 266 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV--NPDVNVDIE 311
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 79/103 (76%), Gaps = 4/103 (3%)
Query: 122 QGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKM 181
+G T R R K+V +E+EE P+ IHVRA+RGQATDSHS+AERVRRE+I+++M
Sbjct: 92 KGSTKNRGGKRGRSSKEV--DEEEE--PKGYIHVRARRGQATDSHSLAERVRRERISERM 147
Query: 182 RCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
R LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM++A+
Sbjct: 148 RVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIAS 190
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 75/99 (75%), Gaps = 2/99 (2%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK +S E P+ IH RA+RG+ATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 233 KQGKDGASKPPEP--PKDYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 290
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
+G A ML+EIINYV SLQ QVEFLSM+LA D N
Sbjct: 291 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 329
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 86/137 (62%), Gaps = 1/137 (0%)
Query: 97 SRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHV 155
S++ E T K +A+ + + G + + +GK S + P R +HV
Sbjct: 9 SKKCKIEDETVRPKVEEEAATATASDGSAGGERGRKQAKGKVSKSKQPAADEPPRDYVHV 68
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AERVRREKI KM+ LQDLVPGC+K +G A ML+EIINYV SLQ QV
Sbjct: 69 RARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQV 128
Query: 216 EFLSMELAAACSSNDLN 232
EFLSM+L+ D +
Sbjct: 129 EFLSMKLSTVNPQLDFD 145
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
R+GK N K P+ +HVRA+RGQATDSHS+AERVRRE+I+++M+ LQDLVPGC+K
Sbjct: 166 RKGK--GKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNK 223
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 224 VIGKALMLDEIINYVQSLQRQVEFLSMKLA 253
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 79/103 (76%), Gaps = 4/103 (3%)
Query: 122 QGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKM 181
+G T R R K+V +E+EE P+ IHVRA+RGQATDSHS+AERVRRE+I+++M
Sbjct: 82 KGSTKNRGGKRGRSSKEV--DEEEE--PKGYIHVRARRGQATDSHSLAERVRRERISERM 137
Query: 182 RCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
R LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM++A+
Sbjct: 138 RVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIAS 180
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 4/100 (4%)
Query: 136 GKKVSSNEKEEGNP-ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK+ N G+P E IHVRA+RGQAT+SHS+AERVRREKI+++M+ LQ+LVPGC K
Sbjct: 242 GKQTKDNA---GSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKV 298
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA+ + D NIE
Sbjct: 299 TGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIE 338
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 12/109 (11%)
Query: 129 KKIRSRRGKKVSSNEKEEGN------------PERIIHVRAKRGQATDSHSIAERVRREK 176
K+++S+R KK + K+E P +HVRA+RGQATDSHS+AERVRREK
Sbjct: 134 KEVKSKRQKKCRGDMKQEEKRPKAVKKVPEEPPTGYVHVRARRGQATDSHSLAERVRREK 193
Query: 177 INKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
I+++M+ LQ LVPGC K G A ML+EIINYV SLQNQVEFLSM+LA+
Sbjct: 194 ISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASV 242
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 4/111 (3%)
Query: 119 SETQGDTYKNKKIRSRRGKKVSSNEKEE----GNPERIIHVRAKRGQATDSHSIAERVRR 174
S +G K K +R+ V++ +++ G IHVRA+RGQATDSHS+AERVRR
Sbjct: 121 SSGRGKPEKAKPAGTRKKGDVAAQKQDPRAAGGQKTDYIHVRARRGQATDSHSLAERVRR 180
Query: 175 EKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
E+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ QVEFLSM++AA+
Sbjct: 181 ERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAAS 231
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 6/111 (5%)
Query: 116 ASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRR 174
S SE GD+ I R K ++++ + P++ IHVRA+RGQATDSHS+AERVRR
Sbjct: 41 GSASENSGDS-----ISPRSTLKGATSKPPQDLPKQDYIHVRARRGQATDSHSLAERVRR 95
Query: 175 EKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
EKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ Q+EFLSM+LAA
Sbjct: 96 EKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAV 146
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Query: 102 TEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQ 161
TE+ + SS G+T + K S N+K + IHVRA+RGQ
Sbjct: 137 TEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLD-----YIHVRARRGQ 191
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
ATD HS+AER RREKI+KKM+ LQD+VPGC+K G AGML+EIINYV LQ QVEFLSM+
Sbjct: 192 ATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMK 251
Query: 222 LAAACSSNDLNIETESSRKTQG 243
LA +L +E S ++ Q
Sbjct: 252 LAVLNPELELAVEDVSVKQFQA 273
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 69/82 (84%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G A ML+EIINYV +LQ
Sbjct: 120 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQ 179
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+LAA D N+E
Sbjct: 180 CQVEFLSMKLAAVNPQLDCNVE 201
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 112/195 (57%), Gaps = 35/195 (17%)
Query: 83 VRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN 142
V T G +D+ ++R T +S++ + ++ + A T GK VS +
Sbjct: 63 VSTSGGGQDLTDPEAKRSKTNKSSNNNGSLRTEAETDPRSA------------GKAVSKS 110
Query: 143 EKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
P++ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L
Sbjct: 111 LPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVL 170
Query: 202 EEIINYVHSLQNQVEFLSMELAAACS---------------------SNDLNIETESSRK 240
+EIINY+ SLQ QVEFLSM+L A + + L +T++SR+
Sbjct: 171 DEIINYIQSLQCQVEFLSMKLEAVNAHANQGVEAFPVKDYGAETYNTAPGLTFDTQTSRE 230
Query: 241 -TQGTNSHEALEMEI 254
QGT++ E L M+I
Sbjct: 231 YAQGTSTSEWLHMQI 245
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 67/80 (83%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A MLEEIINYV SLQ
Sbjct: 4 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQ 63
Query: 213 NQVEFLSMELAAACSSNDLN 232
Q+EFLSM+LAA D+N
Sbjct: 64 RQIEFLSMKLAAVDPRLDIN 83
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 81/107 (75%), Gaps = 7/107 (6%)
Query: 135 RGKKVSSNEKE-----EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
RGK+ + + K+ E E IHVRA+RGQAT+SHS+AERVRREKI+++MR LQ+LVP
Sbjct: 240 RGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVP 299
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETE 236
GC+K G A ML+EIINYV SLQ QVEFLSM+LA + +LNI+ E
Sbjct: 300 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV--NPELNIDIE 344
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATD HS+AER RREKI+KKM+ LQD+VPGC+K G AGML+EIINYV LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQG 243
QVEFLSM+LA +L +E S ++ Q
Sbjct: 243 RQVEFLSMKLAVLNPELELAVEDVSVKQFQA 273
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 68/81 (83%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
++EE P IHVRA+RGQATDSHS+AERVRREKI+++M+ LQ LVPGC K G A ML+
Sbjct: 123 QEEEEAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLD 182
Query: 203 EIINYVHSLQNQVEFLSMELA 223
EIINYV SLQNQVEFLSM+LA
Sbjct: 183 EIINYVQSLQNQVEFLSMKLA 203
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK ++ E P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 137 KKGKGKTAKPAVE-PPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNK 195
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 196 VVGKALMLDEIINYVQSLQQQVEFLSMKLA 225
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK ++ E P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 137 KKGKGKTAKPAVE-PPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNK 195
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 196 VVGKALMLDEIINYVQSLQQQVEFLSMKLA 225
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK ++ E P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 137 KKGKGKTAKPAVE-PPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNK 195
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 196 VVGKALMLDEIINYVQSLQQQVEFLSMKLA 225
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 84/116 (72%), Gaps = 8/116 (6%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEK--------EEGNPERIIHVRAKRGQATDSHSI 168
S+++++ D + ++ +SRRGK+ + E E+ IHVRA+RGQATDSHS+
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 169 AERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
AERVRRE+I+++MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 208
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
K K + KKV E G IHVRA+RGQATDSHS+AERVRREKI+++M+ LQ
Sbjct: 148 KKPKAEKKDQKKVPDQEPPTG----YIHVRARRGQATDSHSLAERVRREKISERMKILQR 203
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
LVPGC K G A ML+EIINYV SLQNQVEFLSM+LA+
Sbjct: 204 LVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASV 242
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 79/116 (68%), Gaps = 4/116 (3%)
Query: 108 ISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHS 167
+ K + + +S G K +GK N K P +HVRA+RGQATDSHS
Sbjct: 151 LPKPEQAGSDSSVEDGGAQNQKPPPPVKGK----NAKPVEPPRDYVHVRARRGQATDSHS 206
Query: 168 IAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+AERVRRE+I+++M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 207 LAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLA 262
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREK 176
S SE GD+ + K SS + + IHVRA+RGQATDSHS+AERVRREK
Sbjct: 41 SASENSGDSVGPSSL------KASSKSVQNLPKQDYIHVRARRGQATDSHSLAERVRREK 94
Query: 177 INKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
I+++M+ LQDLVPGC K G A ML+EIINYV SLQ Q+EFLSM+LAA
Sbjct: 95 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAA 142
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 4/155 (2%)
Query: 99 REVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAK 158
+ V E S ++ T+ + + D K SR+ + + + E IH+RA+
Sbjct: 208 KHVQEGSQQLA-TVVAKQEKDNDEKDGPKRPISASRKSNGKQTEDNSDAPKEDYIHIRAR 266
Query: 159 RGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
GQAT+SHS+AERVRREKI+++M+ LQDLVPGC K +G A ML+EIINYV SLQ QVEFL
Sbjct: 267 SGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 326
Query: 219 SMELAAACSSNDLNIETESSR---KTQGTNSHEAL 250
SM+L+ + D NIE S+ ++QGT + A
Sbjct: 327 SMKLSTVNPALDFNIERILSKDFFQSQGTPASSAF 361
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 74/95 (77%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S GKK++ + P+ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+
Sbjct: 125 SSDGKKLAEQSPKPEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 184
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACS 227
K +G A +L+EIINY+ SLQ QVEFLSM+L A S
Sbjct: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++GK ++ E P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 137 KKGKGKTAKPAVE-PPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNK 195
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 196 VVGKALMLDEIINYVQSLQQQVEFLSMKLA 225
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 84/116 (72%), Gaps = 8/116 (6%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEK--------EEGNPERIIHVRAKRGQATDSHSI 168
S+++++ D + ++ +SRRGK+ + E E+ IHVRA+RGQATDSHS+
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 169 AERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
AERVRRE+I+++MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 208
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 70/81 (86%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC+K G AGML+EIINYV SLQ
Sbjct: 162 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQ 221
Query: 213 NQVEFLSMELAAACSSNDLNI 233
QVEFLSM++AA+ + NI
Sbjct: 222 KQVEFLSMKIAASNPVVNFNI 242
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A ML+EIINYV
Sbjct: 150 PKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYV 209
Query: 209 HSLQNQVEFLSMELA 223
SLQ QVEFLSM+LA
Sbjct: 210 QSLQQQVEFLSMKLA 224
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 4/155 (2%)
Query: 99 REVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAK 158
+ V E S ++ T+ + + D K SR+ + + + E IH+RA+
Sbjct: 208 KHVQEGSQQLA-TVVAKQEKDNDEKDGPKRPISASRKSNGKQTEDNSDAPKEDYIHIRAR 266
Query: 159 RGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
GQAT+SHS+AERVRREKI+++M+ LQDLVPGC K +G A ML+EIINYV SLQ QVEFL
Sbjct: 267 SGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFL 326
Query: 219 SMELAAACSSNDLNIETESSR---KTQGTNSHEAL 250
SM+L+ + D NIE S+ ++QGT + A
Sbjct: 327 SMKLSTVNPALDFNIERILSKDFFQSQGTPASSAF 361
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 70/81 (86%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC+K G AGML+EIINYV SLQ
Sbjct: 162 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQ 221
Query: 213 NQVEFLSMELAAACSSNDLNI 233
QVEFLSM++AA+ + NI
Sbjct: 222 KQVEFLSMKIAASNPVVNFNI 242
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S +GK++ + + E P+ IHVRA+RGQATDSHS+AERVRREKI ++M+ LQDLVPGC
Sbjct: 236 SGKGKELVAADAEP--PKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCS 293
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
K G A ML+EIINYV SLQ QVEFLSM+L
Sbjct: 294 KVTGKAVMLDEIINYVQSLQRQVEFLSMKL 323
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A ML+EIINYV
Sbjct: 150 PKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYV 209
Query: 209 HSLQNQVEFLSMELA 223
SLQ QVEFLSM+LA
Sbjct: 210 QSLQQQVEFLSMKLA 224
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 69/81 (85%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 148 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQ 207
Query: 213 NQVEFLSMELAAACSSNDLNI 233
QVEFLSM++AAA + NI
Sbjct: 208 KQVEFLSMKIAAANPVVNFNI 228
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A ML+EIINYV
Sbjct: 152 PKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYV 211
Query: 209 HSLQNQVEFLSMELA 223
SLQ QVEFLSM+LA
Sbjct: 212 QSLQQQVEFLSMKLA 226
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKV---SSNEKEEGNPERIIH 154
+R + E + +K +G+ KK ++ + K+ S++ EE E IH
Sbjct: 94 KRRLPEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIH 153
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RA+RGQAT+SHS+AERVRREKI+++MR LQ+LVPGC+K G A ML+EIINYV SLQ Q
Sbjct: 154 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 213
Query: 215 VEFLSMELAAACSSNDLNIE 234
VEFLSM+LA +++I+
Sbjct: 214 VEFLSMKLATVNPEINIDID 233
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
N K P+ +HVRA+RGQATDSHS+AERVRRE+I+++M+ LQDLVPGC+K +G A ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 202 EEIINYVHSLQNQVEFLSMELA 223
+EIINYV SLQ QVEFLSM+LA
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 81/108 (75%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
K+K +S+ S++ EE E IH+RA+RGQAT+SHS+AERVRREKI+++MR LQ+
Sbjct: 176 KHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQE 235
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
LVPGC+K G A ML+EIINYV SLQ QVEFLSM+LA +++I+
Sbjct: 236 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDID 283
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 67/75 (89%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +HVRA+RGQATDSHS+AERVRRE+I+++M+ LQDLVPGC+K +G A ML+EIINYV
Sbjct: 187 PKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYV 246
Query: 209 HSLQNQVEFLSMELA 223
SLQ QVEFLSM+LA
Sbjct: 247 QSLQRQVEFLSMKLA 261
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 97/156 (62%), Gaps = 12/156 (7%)
Query: 83 VRTVRGNEDVLY----ESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKK 138
V+ +G D + +S + V +Q T +S S E+ N+KI + K
Sbjct: 70 VKKRKGTNDCIALLNPSASSKNVGDQQTEVS-------SQPESNSMERDNRKISPKTQSK 122
Query: 139 VSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
S++ + G E +H+RAKRGQAT+SHS+AER+RR+KI+++M+ LQDLVPGC+K G A
Sbjct: 123 EDSSDGD-GTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKA 181
Query: 199 GMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
ML+EIINYV SLQ QVEFLSM+LA +IE
Sbjct: 182 VMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIE 217
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 70/81 (86%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC+K G AGML+EIINYV SLQ
Sbjct: 162 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQ 221
Query: 213 NQVEFLSMELAAACSSNDLNI 233
QVEFLSM++AA+ + NI
Sbjct: 222 KQVEFLSMKIAASNPVVNFNI 242
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
N K P+ +HVRA+RGQATDSHS+AERVRRE+I+++M+ LQDLVPGC+K +G A ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 202 EEIINYVHSLQNQVEFLSMELA 223
+EIINYV SLQ QVEFLSM+LA
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
N K P+ +HVRA+RGQATDSHS+AERVRRE+I+++M+ LQDLVPGC+K +G A ML
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 202 EEIINYVHSLQNQVEFLSMELA 223
+EIINYV SLQ QVEFLSM+LA
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLA 272
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
Query: 97 SRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKV---SSNEKEEGNPERII 153
+R + E + +K +G+ KK ++ + K+ S++ EE E I
Sbjct: 145 GKRRLPEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYI 204
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
H+RA+RGQAT+SHS+AERVRREKI+++MR LQ+LVPGC+K G A ML+EIINYV SLQ
Sbjct: 205 HMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 264
Query: 214 QVEFLSMELAAACSSNDLNIE 234
QVEFLSM+LA +++I+
Sbjct: 265 QVEFLSMKLATVNPEINIDID 285
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 93/147 (63%), Gaps = 9/147 (6%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN---EKEEGNP----- 149
RR+ E+ ++ ++ + E GD + K S +G+ S + K+ G P
Sbjct: 62 RRQAEEEEVESTRGASTTNAVDEGCGDGKRVKTSESGKGEGESCSGKPAKQSGKPPSEPP 121
Query: 150 -ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
+ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+
Sbjct: 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 181
Query: 209 HSLQNQVEFLSMELAAACSSNDLNIET 235
SLQ QVEFLSM+L A S IE
Sbjct: 182 QSLQRQVEFLSMKLEAVNSRIAPGIEV 208
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +HVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K +G A ML+EIINYV
Sbjct: 150 PKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYV 209
Query: 209 HSLQNQVEFLSMELA 223
SLQ QVEFLSM+LA
Sbjct: 210 QSLQQQVEFLSMKLA 224
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 91/136 (66%), Gaps = 12/136 (8%)
Query: 128 NKKIRSRR--GKKVSSNEK-EEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCL 184
N K S+R GK+ S++K +E P+ IHVRA+RGQATD+HS+AERVRRE+I+++MR L
Sbjct: 81 NSKESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVL 140
Query: 185 QDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA--------ACSSNDLNIETE 236
Q LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+ S+D
Sbjct: 141 QALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDSSDA-FSDL 199
Query: 237 SSRKTQGTNSHEALEM 252
++K +G HEA M
Sbjct: 200 ITQKIEGMAHHEAFAM 215
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 91/136 (66%), Gaps = 12/136 (8%)
Query: 128 NKKIRSRR--GKKVSSNEK-EEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCL 184
N K S+R GK+ S++K +E P+ IHVRA+RGQATD+HS+AERVRRE+I+++MR L
Sbjct: 81 NSKESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVL 140
Query: 185 QDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA--------ACSSNDLNIETE 236
Q LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+ S+D
Sbjct: 141 QALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDSSDA-FSDL 199
Query: 237 SSRKTQGTNSHEALEM 252
++K +G HEA M
Sbjct: 200 ITQKIEGMAHHEAFAM 215
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRG-KKVSSNEKEEGNP--ERIIH 154
+ E+ + + + +T S +ETQ +N + +G K + +P E IH
Sbjct: 265 KTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGTGKHGKQASQPSDPPKEEYIH 324
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQAT+SHS+AERVRREKI+++M+ LQ+LVPGC K G A ML+EIINYV SLQ Q
Sbjct: 325 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 384
Query: 215 VEFLSMELAAACSSNDLNIE 234
VEFLSM+LA D+NI+
Sbjct: 385 VEFLSMKLATVNPRLDINID 404
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 66/80 (82%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E P IHVRA+RGQATDSHS+AERVRREKI+++M+ LQ LVPGC K G A ML+EII
Sbjct: 155 EEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEII 214
Query: 206 NYVHSLQNQVEFLSMELAAA 225
NYV SLQNQVEFLSM+LA+
Sbjct: 215 NYVQSLQNQVEFLSMKLASV 234
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 17/183 (9%)
Query: 65 YNNSFSNFQTDSRIVVPRVRTVRGNEDV-LYESSRREVTEQSTSISKTMCSSASTSETQG 123
+ + F++F D P V G + + + RR+ + + +K ++ + +E G
Sbjct: 40 FTHGFADFAPD-----PTRDAVPGRDPASIAQKKRRDASAEEEESAKGASTTNAVNEGGG 94
Query: 124 --DTYKNKKIRSRRGKKVSSNEK---EEGNP------ERIIHVRAKRGQATDSHSIAERV 172
D + K S +G+ +S+ K + G P + IHVRA+RGQATDSHS+AER
Sbjct: 95 VGDGKRVKTSESGKGEGETSSGKLAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERA 154
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN 232
RREKI+++M+ LQD+VPGC+K +G A +L+EIINY+ SLQ QVEFLSM+L A S
Sbjct: 155 RREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLAPR 214
Query: 233 IET 235
IE
Sbjct: 215 IEV 217
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRG-KKVSSNEKEEGNP--ERIIH 154
+ E+ + + + +T S +ETQ +N + +G K + +P E IH
Sbjct: 309 KTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGTGKHGKQASQPSDPPKEEYIH 368
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQAT+SHS+AERVRREKI+++M+ LQ+LVPGC K G A ML+EIINYV SLQ Q
Sbjct: 369 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 428
Query: 215 VEFLSMELAAACSSNDLNIE 234
VEFLSM+LA D+NI+
Sbjct: 429 VEFLSMKLATVNPRLDINID 448
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 84/116 (72%), Gaps = 8/116 (6%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEK--------EEGNPERIIHVRAKRGQATDSHSI 168
S+++++ D + ++ +SRRGK+ + E E+ IHVRA+RGQATDSHS+
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 169 AERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
AERVRRE+I+++MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 208
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Query: 136 GKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK V N + P++ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K
Sbjct: 62 GKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 121
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
+G A +L+EIINY+ SLQ QVEFLSM+L A S + IE
Sbjct: 122 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIE 161
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K G A +L+EIIN+V SLQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 213 NQVEFLSMELAAACSSNDLNIET--ESSRKTQGTNSHEALEMEI-WAKEAYGEYTSFH 267
QVE LSM LAA D N++T S + S A M++ W ++A SFH
Sbjct: 262 RQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQLAWPQQAIETEQSFH 319
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K G A +L+EIIN+V SLQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 213 NQVEFLSMELAAACSSNDLNIET--ESSRKTQGTNSHEALEMEI-WAKEAYGEYTSFH 267
QVE LSM LAA D N++T S + S A M++ W ++A SFH
Sbjct: 262 RQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQLAWPQQAIETEQSFH 319
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 81/107 (75%), Gaps = 4/107 (3%)
Query: 132 RSRRGKKVSSNEKE--EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
RSR+ K + + E + E IHVRAKRGQAT+SHS+AERVRRE+I+++MR LQ+LVP
Sbjct: 209 RSRQAVKEAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVP 268
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETE 236
GC+K G A ML+EIINYV SLQ QVEFLSM+LA + +LN++ E
Sbjct: 269 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV--NPELNVDIE 313
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 9/132 (6%)
Query: 111 TMCSSASTSETQGDTYK--------NKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQA 162
T+ +A +T+G + N+KI + K S++ + G E +HVRAKRGQA
Sbjct: 87 TLLHNAGDQQTEGSSQPERNSMEEGNRKISPKMQSKEDSSDGD-GTKEDYVHVRAKRGQA 145
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
T+SHS+AER+RR+KI+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+L
Sbjct: 146 TNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKL 205
Query: 223 AAACSSNDLNIE 234
A +IE
Sbjct: 206 ATVNPELGFDIE 217
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 66/73 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 144 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 203
Query: 213 NQVEFLSMELAAA 225
QVEFLSM++AA+
Sbjct: 204 KQVEFLSMKIAAS 216
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 85/117 (72%), Gaps = 9/117 (7%)
Query: 115 SASTSETQGDTYKNKKIRSRRGKKV-------SSNEKEEGNPERIIHVRAKRGQATDSHS 167
SA+ S Q K + +SRRGK+ SS +++E + + IHVRA+RGQATDSHS
Sbjct: 86 SAAISSPQPKDCKQES-KSRRGKRPRKETEEKSSTDEDEAS-KGYIHVRARRGQATDSHS 143
Query: 168 IAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
+AERVRRE+I+++MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 144 LAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLSMRIAS 200
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRRE 175
S + +G+ KK K S +K P + IHVRA+RGQATDSHS+AERVRRE
Sbjct: 144 SKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRRE 203
Query: 176 KINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
KI+++M+ LQ LVPGC K G A ML+EIINYV LQNQVEFLSM+LA+
Sbjct: 204 KISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLAS 252
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 72/94 (76%)
Query: 141 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
SN+ E + IHVRA+RGQATDSHS+AER RREKI+++M LQDLVPGC+K +G A +
Sbjct: 117 SNQPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASV 176
Query: 201 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
L+EIINY+ +LQ QVEFLSM+L A S + IE
Sbjct: 177 LDEIINYIQALQRQVEFLSMKLEAVNSQMNPGIE 210
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 95/139 (68%), Gaps = 6/139 (4%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGN--PERIIHV 155
R++++ +S I+K + T +T+ + N +R ++ K + ++ + G E HV
Sbjct: 108 RKDLSGESCDIAKEL--DEKTQKTEQNPGPN--LRGKQAAKQAKDDTQSGEVPKENYFHV 163
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQAT+SHS+AERVRREKI+++MR LQ+LVPGC+K G A ML+EIINYV SLQ QV
Sbjct: 164 RARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 223
Query: 216 EFLSMELAAACSSNDLNIE 234
EFLSM+LA +++E
Sbjct: 224 EFLSMKLATVNPELQIDVE 242
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 9/103 (8%)
Query: 123 GDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMR 182
G T KNKK K S+ +E + IHVRA+RGQATDSHS+AERVRRE+I+++M+
Sbjct: 109 GATSKNKK------KASGSDAPKETD---YIHVRARRGQATDSHSLAERVRRERISERMK 159
Query: 183 CLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
LQ+LVPGC K MG A L+EIINYV SLQ QVEFLSM+LAAA
Sbjct: 160 YLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLAAA 202
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 4/147 (2%)
Query: 119 SETQGDTYKNKKIRSRRGKKVSS---NEKEEGNPERIIHVRAKRGQATDSHSIAERVRRE 175
S + D +K + S G SS N+ E + IHVRA+RGQATDSHS+AER RRE
Sbjct: 100 SSVENDGFKAEAEASSAGGNKSSEQSNKPCEAPKQDYIHVRARRGQATDSHSLAERARRE 159
Query: 176 KINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
KI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QVEFLSM+L A S ++N
Sbjct: 160 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTI 219
Query: 236 ES-SRKTQGTNSHEALEMEIWAKEAYG 261
+ K GT + M ++ A G
Sbjct: 220 DGFPSKDVGTQPFDIAGMVFGSQAARG 246
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 66/73 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 144 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 203
Query: 213 NQVEFLSMELAAA 225
QVEFLSM++AA+
Sbjct: 204 KQVEFLSMKIAAS 216
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 21/188 (11%)
Query: 54 HQQPEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMC 113
H+ E AG NNS S + R+ G++D S RR+ S
Sbjct: 327 HELAEVAAGLEPNNSSSVTEQQQASAASPARSPTGSDD----SDRRKRKSSSADKLDVDS 382
Query: 114 SSASTSETQGDTYKNKK---IRSRRGKKVSSNEKEEGNP--------------ERIIHVR 156
+A +++Q K ++++ + S N + G+P + IHVR
Sbjct: 383 KAADVADSQPKRCKGDNDDLVKAKAERSSSENSGDSGSPRAHKENNSSKDHAKQDYIHVR 442
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVE
Sbjct: 443 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 502
Query: 217 FLSMELAA 224
LSM+LA+
Sbjct: 503 NLSMKLAS 510
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
Query: 87 RGNEDVLYESSRREVTEQSTSI------SKTMCSSASTSETQGDTYKNKKIRSRRGKKVS 140
R +DV+ E ++ +TS K M S S E G + S GK
Sbjct: 95 RKRKDVISEDESSKLVSATTSANELTENGKRMKISGSRYENNGSKTGIEASSSGGGKSAE 154
Query: 141 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
+ + P+ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +
Sbjct: 155 KSSQPPEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 214
Query: 201 LEEIINYVHSLQNQVEFLSMEL 222
L+EIINY+ SLQ QVEFLSM+L
Sbjct: 215 LDEIINYIQSLQRQVEFLSMKL 236
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 98/154 (63%), Gaps = 5/154 (3%)
Query: 91 DVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSR----RGKKVSSNEKEE 146
DV+ + S + V+ + + + S A +T G+ +N +S GK V N +
Sbjct: 69 DVVEDDSTKVVSSSNGNGNAVNDSDAKRLKTSGNLDENHDSKSEAEPSSGKHVEQNTQPP 128
Query: 147 GNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
P++ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EII
Sbjct: 129 ELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 188
Query: 206 NYVHSLQNQVEFLSMELAAACSSNDLNIETESSR 239
NY+ SLQ QVEFLSM+L A + IE S+
Sbjct: 189 NYIQSLQRQVEFLSMKLEAVNTRMTPGIEAFPSK 222
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 41 FNTPNFSLATPLAHQQPEFLAGCSYNNSFSNFQTD-SRIVVPRVRTVRGNEDVLYESSRR 99
F PN A L ++P F G SF++F +R P + ++ R
Sbjct: 24 FPPPNSPDA--LGLRRPHFAHG-----SFADFAPGPTRDADP--------ASIAHKKPRH 68
Query: 100 EVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEK---EEGNP------E 150
E+ S ++A GD + K S G + +S+ K + G P +
Sbjct: 69 AAGEEEESAKGASTTNAVDEGGGGDGKRIKASESGEGGRENSSGKPAEQSGKPPSEPPKQ 128
Query: 151 RIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHS 210
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ S
Sbjct: 129 DYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQS 188
Query: 211 LQNQVEFLSMELAAACSSNDLNIET 235
LQ Q EFLSM+L A S + IE
Sbjct: 189 LQRQAEFLSMKLEAVNSRMESGIEV 213
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
Query: 136 GKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
GK V N + P++ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K
Sbjct: 131 GKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 190
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSR 239
+G A +L+EIINY+ SLQ QVEFLSM+L A S + IE S+
Sbjct: 191 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSK 235
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 66/80 (82%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E P IHVRA+RGQATDSHS+AERVRREKI+++M+ LQ LVPGC K G A ML+EII
Sbjct: 162 EEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEII 221
Query: 206 NYVHSLQNQVEFLSMELAAA 225
NYV SLQNQVEFLSM+LA+
Sbjct: 222 NYVQSLQNQVEFLSMKLASV 241
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 69/85 (81%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 300 EGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 359
Query: 210 SLQNQVEFLSMELAAACSSNDLNIE 234
SLQ QVEFLSM+LA D N+E
Sbjct: 360 SLQQQVEFLSMKLATVNPHVDFNME 384
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYT 264
QVEFLSM+L A S + +E K G + +A M I+ +A EY
Sbjct: 200 RQVEFLSMKLEAVNSRMNHTVEG-FPLKDLGVQTFDAAAM-IYGSQATREYA 249
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S++ K S ++EE P +HVRA+RGQATDSHS+AER RREKIN++M+ LQ+LVPGC+
Sbjct: 162 SKKSKNEGSQQEEEKLP--YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCN 219
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEM 252
K G A +L+EIIN+V LQ QVE LSM LAA D N+++ S + T + +AL
Sbjct: 220 KISGTALVLDEIINHVQFLQRQVEILSMRLAAVNPRIDFNLDSMLSAEFSFTITCKALG- 278
Query: 253 EIWA 256
+IWA
Sbjct: 279 QIWA 282
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 130 KIRSRRGKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
++ + GK V N + P++ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLV
Sbjct: 125 EVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLV 184
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSR 239
PGC+K +G A +L+EIINY+ SLQ QVEFLSM+L A S + IE S+
Sbjct: 185 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSK 235
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Query: 127 KNKKIRSRRGKKVS----SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMR 182
K + +++ GKK+ + ++ G IHVRA+RGQATDSHS+AERVRREKI+++M+
Sbjct: 116 KERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMK 175
Query: 183 CLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
LQ LVPGC K G A ML+EIINYV SLQNQVEFLSM+LA+
Sbjct: 176 TLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 217
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Query: 127 KNKKIRSRRGKKVS----SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMR 182
K + +++ GKK+ + ++ G IHVRA+RGQATDSHS+AERVRREKI+++M+
Sbjct: 148 KERDQKAKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMK 207
Query: 183 CLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
LQ LVPGC K G A ML+EIINYV SLQNQVEFLSM+LA+
Sbjct: 208 TLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 249
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 155 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 214
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYT 264
QVEFLSM+L A S + +E K G + +A M I+ +A EY
Sbjct: 215 RQVEFLSMKLEAVNSRMNHTVEG-FPLKDLGVQTFDAAAM-IYGSQATREYA 264
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Query: 97 SRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKV---SSNEKEEGNPERII 153
+R + E + +K +G+ KK ++ + K+ S++ EE E I
Sbjct: 145 GKRRLPEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYI 204
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
H+RA+RGQAT+SHS+AERVRREKI+++MR LQ+L PGC+K G A ML+EIINYV SLQ
Sbjct: 205 HMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQ 264
Query: 214 QVEFLSMELAAACSSNDLNIE 234
QVEFLSM+LA +++I+
Sbjct: 265 QVEFLSMKLATVNPEINIDID 285
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
Query: 135 RGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
RGKKV + KE+ + IHVRA+RGQAT+SHS+AER RREKI+ +M+ LQ LVPGC +
Sbjct: 1 RGKKVKN--KEQPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEV 58
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A MLEEIINYV SLQ Q+EFLSM+LAA D N+E
Sbjct: 59 TGKAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRLDTNVE 98
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 66/73 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 141 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 200
Query: 213 NQVEFLSMELAAA 225
QVEFLSM++AA+
Sbjct: 201 KQVEFLSMKIAAS 213
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 70/85 (82%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHSIAER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 117 IHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQ 176
Query: 213 NQVEFLSMELAAACSSNDLNIETES 237
+QVEFLSM+L A S ++N E
Sbjct: 177 HQVEFLSMKLEAVNSRANMNPTNEG 201
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ IHVRA+RGQATDSHS+AER RREKI+++M LQDLVPGC++ G A ML+EIINYV
Sbjct: 185 PKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYV 244
Query: 209 HSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWA 256
SLQ QVEFLSM+LA + N +S T+ E+L ++A
Sbjct: 245 QSLQRQVEFLSMKLATVNPRMEFN--ANASLSTEMIQPGESLTQSLYA 290
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 23/166 (13%)
Query: 92 VLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNE----KEEG 147
++ E S V+E S S A +T + +KK R R GK E K+E
Sbjct: 139 LVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKK-RKRIGKDCEEEEDKKQKDEQ 197
Query: 148 NP------------------ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
+P + IH+RA+RGQAT+SHS+AERVRREKI+++M+ LQDLVP
Sbjct: 198 SPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVP 257
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
GC K G A ML+EIINYV SLQ Q+EFLSM+L+A D N+E+
Sbjct: 258 GCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLES 303
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 74/94 (78%), Gaps = 5/94 (5%)
Query: 135 RGKKVSSNEKE-----EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
RGK+V+ K+ E + IHVRA+RGQAT+SHS+AERVRREKI+++MR LQ+LVP
Sbjct: 215 RGKQVAKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVP 274
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
GC+K G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 275 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 308
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 66/73 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 141 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 200
Query: 213 NQVEFLSMELAAA 225
QVEFLSM++AA+
Sbjct: 201 KQVEFLSMKIAAS 213
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 66/73 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 151 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 210
Query: 213 NQVEFLSMELAAA 225
QVEFLSM++AA+
Sbjct: 211 KQVEFLSMKIAAS 223
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Query: 136 GKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
GKKV +KE+ + IHVRA+RGQATD HS+AER RREKI+ +M+ LQ LVPGC +
Sbjct: 133 GKKV--KKKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVT 190
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A MLEEIINYV SLQ Q+EFLSM+LAA D N+E
Sbjct: 191 GKAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRVDTNVE 229
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
Query: 143 EKEEGNPERI---IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
E EE PE + IHVRA+RGQATDSHS+AERVRR++I+++M+ LQ LVPGC+K G A
Sbjct: 232 ELEEEKPEPVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKAL 291
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSR 239
ML+EIINYV SLQ QVEFLSM+L+ DL+ + + S+
Sbjct: 292 MLDEIINYVQSLQRQVEFLSMKLSTMNPQLDLDGQYKPSK 331
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 66/73 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 141 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 200
Query: 213 NQVEFLSMELAAA 225
QVEFLSM++AA+
Sbjct: 201 KQVEFLSMKIAAS 213
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 73/90 (81%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++ K ++++ E E IHVRA+RGQAT+SHS+AERVRREKI+++MR LQ+LVPGC+K
Sbjct: 248 KQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNK 307
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 308 ITGKAVMLDEIINYVQSLQQQVEFLSMKLA 337
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
+SN K P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K G AG
Sbjct: 115 TSNSKASEKPD-YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAG 173
Query: 200 MLEEIINYVHSLQNQVEFLS 219
ML+EIINYV SLQ QVEFLS
Sbjct: 174 MLDEIINYVQSLQRQVEFLS 193
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 98/171 (57%), Gaps = 4/171 (2%)
Query: 103 EQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHVRAKRGQ 161
E + S K M + S + G + S G K N K P++ IHVRA+RGQ
Sbjct: 40 ELNDSNGKRMKTPVSKNGNTGSKEAEVEASSADGSKPDKNSKPAEPPKQDYIHVRARRGQ 99
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
ATDSHS+AER RRE+I+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QVEFLSM+
Sbjct: 100 ATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSMK 159
Query: 222 LAAACSSNDLNIETES-SRKTQGTNSHEALEMEIWAKEAYGEYT-SFHSTW 270
L A S ++N E K G + M I+ + EY H W
Sbjct: 160 LEAVNSRINVNPSFEGFHSKDLGLQPIDGAGM-IFGSQTAREYAQGLHPEW 209
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 23/166 (13%)
Query: 92 VLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNE----KEEG 147
++ E S V+E S S A +T + +KK R R GK E K+E
Sbjct: 88 LVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKK-RKRIGKDCEEEEDKKQKDEQ 146
Query: 148 NP------------------ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
+P + IH+RA+RGQAT+SHS+AERVRREKI+++M+ LQDLVP
Sbjct: 147 SPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVP 206
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
GC K G A ML+EIINYV SLQ Q+EFLSM+L+A D N+E+
Sbjct: 207 GCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLES 252
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 71/100 (71%), Gaps = 4/100 (4%)
Query: 125 TYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCL 184
+ K K+ R G V E G IHVRAKRGQA DSHS+AERVRREKI++KM L
Sbjct: 131 SVKEKRPREHGGADVDVKEAPAG----YIHVRAKRGQARDSHSLAERVRREKISEKMLLL 186
Query: 185 QDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
Q LVPGC K G A ML+EII+YV SLQNQVEFLSM+LA+
Sbjct: 187 QSLVPGCDKVTGKAMMLDEIISYVQSLQNQVEFLSMKLAS 226
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
Query: 136 GKKVSSNEKE--EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
GK EKE E E IH+RA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K
Sbjct: 236 GKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 295
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA D NIE
Sbjct: 296 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD-NIE 335
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 66/73 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 144 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 203
Query: 213 NQVEFLSMELAAA 225
QVEFLSM++AA+
Sbjct: 204 KQVEFLSMKIAAS 216
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 7/186 (3%)
Query: 90 EDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSS---NEKEE 146
++VL ++ ++ + +K M S+ E G +K + S G SS N+ E
Sbjct: 48 DEVLSSTTTANLSNNDSGSNKRMKVGGSSFENDG--FKAEAEASSVGGNKSSEQSNKPCE 105
Query: 147 GNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDL PGC+K +G A +L+EIIN
Sbjct: 106 APKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIIN 165
Query: 207 YVHSLQNQVEFLSMELAAACSSNDLNIETES-SRKTQGTNSHEALEMEIWAKEAYG-EYT 264
Y+ SLQ QVEFLSM+L A S + N + K GT + M ++ A G
Sbjct: 166 YIQSLQRQVEFLSMKLEAVNSRMNTNPTIDGFPSKDVGTQPFDIAGMVFGSQAARGYAQG 225
Query: 265 SFHSTW 270
S H W
Sbjct: 226 SSHPGW 231
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 65/74 (87%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E IHVRA+RGQAT+SHS+AERVRREKI+++MR LQ+LVPGC+K G A ML+EIINYV
Sbjct: 258 ENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQ 317
Query: 210 SLQNQVEFLSMELA 223
SLQ QVEFLSM+LA
Sbjct: 318 SLQQQVEFLSMKLA 331
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Query: 136 GKKVSSNEKEEGNPER--IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
GK + K P + IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K
Sbjct: 125 GKPAEQSAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 184
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
+G A +L+EIINY+ SLQ QVEFLSM+L A S + IE
Sbjct: 185 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEA 226
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 128 NKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDL 187
N+KI + K S++ + G E +H+RAKRGQAT+SHS+AER+RR+KI+++M+ LQDL
Sbjct: 80 NRKISPKMQSKEDSSDGD-GTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 138
Query: 188 VPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRK 240
VPGC K G A ML+EIINYV SLQ QVEFLSM+LA +IE S++
Sbjct: 139 VPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQIISKQ 191
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQG-DTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHV 155
RRE +S I T+ +S ++ Q D + K + + +K++ P + IHV
Sbjct: 77 RREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHV 136
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 216 EFLSMELAAACSSNDLNIET 235
EFLSM+L A S + IE
Sbjct: 197 EFLSMKLEAVNSRMNPGIEV 216
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ IHVRA+RGQATDSHS+AER RREKI+++M LQDLVPGC++ G A ML+EIINYV
Sbjct: 188 PKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYV 247
Query: 209 HSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWA 256
SLQ QVEFLSM+LA + N S T+ E+L ++A
Sbjct: 248 QSLQRQVEFLSMKLATVNPRMEFNANAALS--TEMIQPGESLTQSLYA 293
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQG-DTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHV 155
RRE +S I T+ +S ++ Q D + K + + +K++ P + IHV
Sbjct: 77 RREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHV 136
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 216 EFLSMELAAACSSNDLNIET 235
EFLSM+L A S + IE
Sbjct: 197 EFLSMKLEAVNSRMNPGIEV 216
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 74/97 (76%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 118 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 177
Query: 210 SLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNS 246
SLQ QVEFLSM+L+A + +++ + TQ +S
Sbjct: 178 SLQRQVEFLSMKLSAISPELNCDLDLQDILCTQDASS 214
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 73/97 (75%), Gaps = 7/97 (7%)
Query: 132 RSRRGKKVSSNEKEEGN----PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDL 187
R R GKK +KE P+ IHVRA+RGQATDSHS++ERVRRE+I+++MR LQ L
Sbjct: 81 RKRGGKK---QDKETAEEEEEPKGYIHVRARRGQATDSHSLSERVRRERISERMRMLQSL 137
Query: 188 VPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
VPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 138 VPGCDKVTGKALILDEIINYVRSLQNQVEFLSMRIAS 174
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query: 127 KNKKIRSRRG-------KKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKIN 178
KN +R+ G K N P++ IHVRA+RGQATDSHS+AER RREKI+
Sbjct: 92 KNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 151
Query: 179 KKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACS 227
++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ+QVEFLSM+L A S
Sbjct: 152 ERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNS 200
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 65/77 (84%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P IHVRA+RGQATDSHS+AERVRRE+I+++M+ LQ LVPGC K G A ML+EIINYV
Sbjct: 168 PAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYV 227
Query: 209 HSLQNQVEFLSMELAAA 225
SLQNQVEFLSM+LA+
Sbjct: 228 QSLQNQVEFLSMKLASV 244
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 73/94 (77%)
Query: 141 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
S++ E E IHVRAKRGQAT+SHS+AERVRRE+I+++M+ LQDLVPGC+K G A M
Sbjct: 232 SSQTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVM 291
Query: 201 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
L+EIINYV SLQ QVEFLSM+LA ++ IE
Sbjct: 292 LDEIINYVQSLQRQVEFLSMKLATVYPEMNVQIE 325
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 89 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 148
Query: 213 NQVEFLSMELAAACSSNDLNIETES-SRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTW 270
+QVEFLSM+L A S ++N + S K GT + + ++ + G W
Sbjct: 149 HQVEFLSMKLEAVNSRFNMNPTIDCFSSKDVGTQPFDLAGIIFGSQASRGYAQGSQPGW 207
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 65/80 (81%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E P IHVRA+RGQATDSHS+AERVRREKI+K+M LQ LVPGC K G A +L+EII
Sbjct: 129 EDPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEII 188
Query: 206 NYVHSLQNQVEFLSMELAAA 225
NYV SLQNQVEFLSM+LA+
Sbjct: 189 NYVQSLQNQVEFLSMKLASV 208
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 79/108 (73%), Gaps = 6/108 (5%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREK 176
S SE GD+ S R K S+N + + + IHVRA+RGQATDSHS+AERVRREK
Sbjct: 22 SCSENSGDSG------SPRALKDSNNRNKILSKQDYIHVRARRGQATDSHSLAERVRREK 75
Query: 177 INKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
I+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVE LSM+LA+
Sbjct: 76 ISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESLSMKLAS 123
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 80/119 (67%), Gaps = 5/119 (4%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K G A +L+EIIN+V SLQ
Sbjct: 198 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 257
Query: 213 NQVEFLSMELAAACSSNDLNIET----ESSRKTQGTNSHEALEMEIWAKEAYGEYTSFH 267
QVE LSM LAA D N++T E+ G+ + A+++ W +A S+H
Sbjct: 258 RQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNGTAMQL-AWPHQAIEAEHSYH 315
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
Query: 133 SRRGKKVSSNEKEE-GNPERI--IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
SR+ K V++ E G+ E++ +HVR +RGQATDSHS+AER RREKIN +M+ LQ+LVP
Sbjct: 167 SRKSKSVAAATDESSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVP 226
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
GC+K G A +L++IIN+V SLQN+VE LSM+LAA D N+++
Sbjct: 227 GCNKISGTALVLDKIINHVQSLQNEVEILSMKLAAVNPVIDFNLDS 272
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 74/97 (76%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 210 SLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNS 246
SLQ Q+EFLSM+L+A + +++ + TQ +S
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDLQDILCTQDASS 215
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 94/152 (61%), Gaps = 9/152 (5%)
Query: 83 VRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN 142
V+ +G +D + V +Q T +S S+T+ ++ + + S + + +
Sbjct: 77 VKKRKGIDDCTSLLNPSNVGDQQTEVS---------SQTERNSLEENRTISPKMQSKEDS 127
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+G E +H+RAKRGQAT+SHS+AER+RR+KI+++M+ LQDLVPGC K G A ML+
Sbjct: 128 SDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLD 187
Query: 203 EIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
EIINYV SLQ QVEFLSM+LA +IE
Sbjct: 188 EIINYVQSLQRQVEFLSMKLATVNPELGFDIE 219
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Query: 128 NKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDL 187
N K + + K+S K++ IHVRA+RGQATDSHS+AER RREKI+++M+ LQDL
Sbjct: 124 NDKNAAEQNSKISEPPKQD-----YIHVRARRGQATDSHSLAERARREKISERMKILQDL 178
Query: 188 VPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETES 237
VPGC+K +G A +L+EIINY+ SLQ QVEFLSM+L A S +N E
Sbjct: 179 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMGMNPTVEG 228
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 75/103 (72%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
+++ K S+ EE +HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC+
Sbjct: 175 TKKCKNASNETSEEAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCN 234
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
K G A +L+EII++V SLQ QVEFLSM LAA D N+++
Sbjct: 235 KISGTALVLDEIISHVQSLQRQVEFLSMRLAAVNPRIDFNLDS 277
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 74/97 (76%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 123 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 182
Query: 210 SLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNS 246
SLQ Q+EFLSM+L+A + +++ + TQ +S
Sbjct: 183 SLQRQIEFLSMKLSAIGPGLNCDLDLQDILCTQDASS 219
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 92/129 (71%), Gaps = 6/129 (4%)
Query: 105 STSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNE-----KEEGNPER-IIHVRAK 158
ST+ +S + ++ GD ++K + +G++ SS + +E +P++ IHVRA+
Sbjct: 56 STTNGGARGNSNAVNDDGGDGKRSKTSGNSKGEENSSGKHAEETSDEPHPKKDYIHVRAR 115
Query: 159 RGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SL +QVEFL
Sbjct: 116 RGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFL 175
Query: 219 SMELAAACS 227
SM+L A S
Sbjct: 176 SMKLEAVNS 184
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 65/77 (84%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P IHVRA+RGQATDSHS+AERVRREKI+++M+ LQ LVPGC + G A +L+EIINYV
Sbjct: 139 PTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYV 198
Query: 209 HSLQNQVEFLSMELAAA 225
SLQNQVEFLSM+LA+
Sbjct: 199 QSLQNQVEFLSMKLASV 215
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
+N+ I + K S++ + G E +H+RAKRGQAT+SHS+AER+RR+KI+++M+ LQD
Sbjct: 119 ENRTISPKMQSKEDSSDGD-GTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQD 177
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
LVPGC K G A ML+EIINYV SLQ QVEFLSM+LA +IE
Sbjct: 178 LVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIE 225
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 74/97 (76%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 210 SLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNS 246
SLQ Q+EFLSM+L+A + +++ + TQ +S
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDLQDILCTQDASS 215
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 87/132 (65%), Gaps = 9/132 (6%)
Query: 111 TMCSSASTSETQGDTYK--------NKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQA 162
T+ +A +T+G + N+KI + K S++ + G E +H+RAKRGQA
Sbjct: 87 TLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGD-GTKEDYVHIRAKRGQA 145
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
T+SHS+AER+RR+KI+++M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+L
Sbjct: 146 TNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKL 205
Query: 223 AAACSSNDLNIE 234
+ +IE
Sbjct: 206 STVNPELGFDIE 217
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEI 254
QVEFLSM+L A S + IE ++ G + E EM+
Sbjct: 194 RQVEFLSMKLEAVNSRMNPGIEVFPPKEF-GQQTFENPEMQF 234
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E N E +H+RAKRGQAT++HS+AER RREKIN++M+ LQDLVPGC+K G A ML+EII
Sbjct: 109 ESNREDYVHIRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEII 168
Query: 206 NYVHSLQNQVEFLSMELAAACSSNDLNIETE 236
NYV SLQ QVEFLSM+L+A S +LN + +
Sbjct: 169 NYVQSLQRQVEFLSMKLSAV--SPELNCDLD 197
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 74/97 (76%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 210 SLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNS 246
SLQ Q+EFLSM+L+A + +++ + TQ +S
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNCDLDLQDILCTQDASS 189
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 67/81 (82%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ
Sbjct: 256 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 315
Query: 213 NQVEFLSMELAAACSSNDLNI 233
QVEFLSM+L+ +L++
Sbjct: 316 CQVEFLSMKLSTVDPRRELDV 336
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQG-DTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHV 155
RRE +S I T+ +S ++ Q D + K + + +K++ P + IHV
Sbjct: 71 RREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHV 130
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QV
Sbjct: 131 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 190
Query: 216 EFLSMELAAACSSNDLNIET 235
EFLSM+L A S + IE
Sbjct: 191 EFLSMKLEAVNSRMNPGIEV 210
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 69/83 (83%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IH+RA+RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ
Sbjct: 166 IHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQ 225
Query: 213 NQVEFLSMELAAACSSNDLNIET 235
Q+EFLSM+L+A D N+E+
Sbjct: 226 CQIEFLSMKLSAVNPVLDFNLES 248
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 85/119 (71%), Gaps = 2/119 (1%)
Query: 118 TSETQGDTYKNK-KIRSRRGKKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRRE 175
T+ + D +++K + R GK +++ P++ IHVRA+RGQATDSHS+AER RRE
Sbjct: 132 TAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARRE 191
Query: 176 KINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
KI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QVEFLSM+L A S IE
Sbjct: 192 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIE 250
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 70/87 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI ++M+ LQDLVPGC+K +G A +L+EIINYV +L+
Sbjct: 112 IHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALE 171
Query: 213 NQVEFLSMELAAACSSNDLNIETESSR 239
QVEFLSM+L A + + +ET S+
Sbjct: 172 RQVEFLSMKLEAVNAHVNNGVETFPSK 198
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 68/82 (82%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ +LQ
Sbjct: 57 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 116
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+L A S + IE
Sbjct: 117 RQVEFLSMKLEAVNSRTNSGIE 138
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 71/87 (81%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 72 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 131
Query: 213 NQVEFLSMELAAACSSNDLNIETESSR 239
QVEFLSM+L A + + IE +S+
Sbjct: 132 RQVEFLSMKLEAVNTRMNPGIEVFASK 158
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 67/81 (82%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ
Sbjct: 276 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 335
Query: 213 NQVEFLSMELAAACSSNDLNI 233
QVEFLSM+L+ +L++
Sbjct: 336 CQVEFLSMKLSTVDPRRELDV 356
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
SS ++E+ P +HVRA+RGQATDSHS+AER RREKIN++M+ LQ+LVPGC+K G A
Sbjct: 164 SSQQEEDMLP--YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTAL 221
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
+L+EIIN+V SLQ QVEFLSM LAA D N+++
Sbjct: 222 VLDEIINHVQSLQCQVEFLSMRLAAVNPRIDFNLDS 257
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 75/102 (73%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHSIAER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ +LQ
Sbjct: 110 IHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQ 169
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEI 254
QVEFLSM+L A + + I + S+ H AL + +
Sbjct: 170 RQVEFLSMKLEAVNAHVNNRIASFQSKDVGAEPFHTALGLTL 211
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 76/100 (76%), Gaps = 5/100 (5%)
Query: 136 GKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
GK+V++ ++ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K
Sbjct: 225 GKEVAAEPSKD-----YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVT 279
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
G A ML+EIINYV SLQ QVEFLSM+L+ L++++
Sbjct: 280 GKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLKLDVDS 319
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 93/148 (62%), Gaps = 8/148 (5%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNP-----ERI 152
RRE + + +S S+ + + +GD + K S + + +E P +
Sbjct: 85 RREDDDSAKGVS---TSNDANAMNEGDNKRLKTGGSNENHESKAEGEETAKPAEPPKQDY 141
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 142 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 201
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRK 240
QVEFLSM+L A S IE S++
Sbjct: 202 RQVEFLSMKLEAVNSRLSPGIEGFPSKE 229
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 64/72 (88%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ +LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 193
Query: 213 NQVEFLSMELAA 224
QVEFLSM+L A
Sbjct: 194 RQVEFLSMKLEA 205
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 68/83 (81%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 213 NQVEFLSMELAAACSSNDLNIET 235
QVEFLSM+L A S + IE
Sbjct: 209 RQVEFLSMKLEAVNSRLNTGIEA 231
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 64/72 (88%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ +LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 193
Query: 213 NQVEFLSMELAA 224
QVEFLSM+L A
Sbjct: 194 RQVEFLSMKLEA 205
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 68/82 (82%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ +LQ
Sbjct: 132 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 191
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+L A + + IE
Sbjct: 192 RQVEFLSMKLEAVNAHVNNGIE 213
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 72/89 (80%), Gaps = 2/89 (2%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 210 SLQNQVEFLSMELAAACS--SNDLNIETE 236
SLQ Q+EFLSM+L+A + DL+++ E
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDLQDE 207
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Query: 128 NKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDL 187
N+KI + K S++ + G E +H+RAKRGQAT+SHS+AER+RR+KI+++M+ LQDL
Sbjct: 5 NRKISPKIQSKEDSSDGD-GTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 63
Query: 188 VPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRK 240
VPGC K G A ML+EIINYV SLQ QVEFLSM+L+ +IE S++
Sbjct: 64 VPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQ 116
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 63/71 (88%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++M+ LQ LVPGC+K G A ML+EIINYV SLQ
Sbjct: 79 IHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQ 138
Query: 213 NQVEFLSMELA 223
QVEFLSM+LA
Sbjct: 139 RQVEFLSMKLA 149
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQG-DTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHV 155
RRE +S I T+ +S ++ Q D + K + + +K++ P + IHV
Sbjct: 77 RREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHV 136
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 216 EFLSMELAAACSSNDLNIET 235
EFLSM+L A S + IE
Sbjct: 197 EFLSMKLEAVNSRMNPGIEV 216
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 67/83 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 45 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 104
Query: 213 NQVEFLSMELAAACSSNDLNIET 235
QVEFLSM+L A S IE
Sbjct: 105 RQVEFLSMKLEAVNSRIGPGIEV 127
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 98 RREVTEQSTSISKTMCSSASTSETQG-DTYKNKKIRSRRGKKVSSNEKEEGNPER-IIHV 155
RRE +S I T+ +S ++ Q D + K + + +K++ P + IHV
Sbjct: 77 RREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHV 136
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 216 EFLSMELAAACSSNDLNIET 235
EFLSM+L A S + IE
Sbjct: 197 EFLSMKLEAVNSRMNPGIEV 216
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 68/82 (82%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ +LQ
Sbjct: 93 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQ 152
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+L A + + IE
Sbjct: 153 RQVEFLSMKLEAVNAHVNNGIE 174
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
+G E +HVRAKRGQAT+SHS+AER+RR+KI+++M+ LQDLVPGC K G A ML+EII
Sbjct: 138 DGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEII 197
Query: 206 NYVHSLQNQVEFLSMELAAACSSNDLNIE 234
NYV SLQ QVEFLSM+LA +IE
Sbjct: 198 NYVQSLQRQVEFLSMKLATVNPELSFDIE 226
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 210 SLQNQVEFLSMELAAACSS--NDLNIETE 236
SLQ Q+EFLSM+L+A DL+++ E
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNCDLDLQDE 181
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 77/115 (66%), Gaps = 8/115 (6%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ IHVRA+RGQATD HS+AERVRREKI ++M+ LQDLVPGC+K G A M++EIINYV
Sbjct: 212 PKDYIHVRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYV 271
Query: 209 HSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEY 263
SLQ QVEFLSM+L A N+E G + + LE +AY ++
Sbjct: 272 QSLQCQVEFLSMKLEAVNPKLACNME--------GFLARDMLEPSFNTAKAYPQF 318
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 65/80 (81%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++M+ LQ LVPGC+K G A ML+EIINYV SLQ
Sbjct: 109 IHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQ 168
Query: 213 NQVEFLSMELAAACSSNDLN 232
QVEFLSM+LA D +
Sbjct: 169 RQVEFLSMKLATMNPQLDFD 188
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 68/83 (81%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 149 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 213 NQVEFLSMELAAACSSNDLNIET 235
QVEFLSM+L A S + IE
Sbjct: 209 RQVEFLSMKLEAVNSRLNTGIEA 231
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 64/72 (88%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQD+VPGC+K +G A +L+EIINY+ SLQ
Sbjct: 121 IHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQ 180
Query: 213 NQVEFLSMELAA 224
QVEFLSM+L A
Sbjct: 181 RQVEFLSMKLEA 192
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 120 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 179
Query: 210 SLQNQVEFLSMELA 223
SLQ QVEFLSM+L+
Sbjct: 180 SLQRQVEFLSMKLS 193
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 69/82 (84%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
HVRA++GQAT++HS+AER+RREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ
Sbjct: 175 HVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQR 234
Query: 214 QVEFLSMELAAACSSNDLNIET 235
QVEFLSM+L+A DL+IE+
Sbjct: 235 QVEFLSMKLSAVNPRIDLDIES 256
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 65/79 (82%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVP C K G A ML+EIINYV SLQ
Sbjct: 23 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQ 82
Query: 213 NQVEFLSMELAAACSSNDL 231
Q+EFLSM+LAA D+
Sbjct: 83 RQIEFLSMKLAAVDPRLDI 101
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 67/83 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSH +AER RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 149 IHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 208
Query: 213 NQVEFLSMELAAACSSNDLNIET 235
QVEFLSM+L A S + IE
Sbjct: 209 RQVEFLSMKLEAVNSRLNTGIEA 231
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 70/98 (71%)
Query: 138 KVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGM 197
K+ S EE +HVRA+RGQATDSHS+AER RREKIN +M+ L++LVPGC K G
Sbjct: 16 KMKSKSSEENGKLPYVHVRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGT 75
Query: 198 AGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
A +L+EIIN+V SLQ QVE LSM LAA D N++T
Sbjct: 76 ALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDT 113
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 210 SLQNQVEFLSMELA 223
SLQ QVEFLSM+L+
Sbjct: 683 SLQRQVEFLSMKLS 696
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 210 SLQNQVEFLSMELA 223
SLQ QVEFLSM+L+
Sbjct: 683 SLQRQVEFLSMKLS 696
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 210 SLQNQVEFLSMELA 223
SLQ QVEFLSM+L+
Sbjct: 683 SLQRQVEFLSMKLS 696
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 63/73 (86%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M LQ LVPGC K G A +LEEIINYV SLQ
Sbjct: 117 IHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQ 176
Query: 213 NQVEFLSMELAAA 225
+QVEFLSM+LA+
Sbjct: 177 HQVEFLSMKLASV 189
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 10/170 (5%)
Query: 110 KTMCSSASTSETQGDTYKNKKI--RSRRGKKVS-----SNEKEEGNPERIIHVRAKRGQA 162
K + SS S S+ Q K ++ S G K+ + E+ + IHVRA+RGQA
Sbjct: 48 KHIKSSGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQA 107
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
TDSHS+AER RREKI+++M+ LQD+VPGC+K +G A +L+EIINY+ SLQ+QVEFLSM+L
Sbjct: 108 TDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKL 167
Query: 223 AAACS--SNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYTSFHSTW 270
A S S IE S++ GT + + ++ A G W
Sbjct: 168 EAVNSRLSMSPTIECFPSKEV-GTQPFDLAGIIFGSQPARGYAQGSQPGW 216
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 63/70 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQD+VPGC+K +G A +L+EIINY+ SLQ
Sbjct: 48 IHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQ 107
Query: 213 NQVEFLSMEL 222
QVEFLSM+L
Sbjct: 108 RQVEFLSMKL 117
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 65/72 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RG+ATDSHS+AER RREKI+++M+ LQ+LVPGC+K G AGML+EIINYV SLQ
Sbjct: 4 VHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQ 63
Query: 213 NQVEFLSMELAA 224
QVEFLSM++AA
Sbjct: 64 QQVEFLSMKVAA 75
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 68/84 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M LQDLVPGC+K +G A +L+EIINY+ SLQ
Sbjct: 82 IHVRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQ 141
Query: 213 NQVEFLSMELAAACSSNDLNIETE 236
QVEFLSM+L A S + + TE
Sbjct: 142 CQVEFLSMKLEAVNSRMNTSPTTE 165
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 68/86 (79%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
HVRAKRGQAT+SHS+AER RREKIN +M+ LQDLVPGC+K G A ML+EIINYV SLQ
Sbjct: 153 HVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 212
Query: 214 QVEFLSMELAAACSSNDLNIETESSR 239
QVEFLSM+L+A + ++E + R
Sbjct: 213 QVEFLSMKLSAIRPGFNRDLELQDVR 238
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 71/91 (78%), Gaps = 4/91 (4%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++ K+ + E P IHVRA+RGQATDSHS+AERVRREKI+++M+ LQ LVPGC K
Sbjct: 163 KKAKEAAGGEP----PAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDK 218
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
G A ML+EII+YV SLQNQVEFLSM+LA+
Sbjct: 219 VTGKALMLDEIISYVQSLQNQVEFLSMKLAS 249
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 71/91 (78%), Gaps = 4/91 (4%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
++ K+ + E G IHVRA+RGQATDSHS+AERVRREKI+++M+ LQ LVPGC K
Sbjct: 163 KKAKEAAGGEPPAG----YIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDK 218
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
G A ML+EII+YV SLQNQVEFLSM+LA+
Sbjct: 219 VTGKALMLDEIISYVQSLQNQVEFLSMKLAS 249
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVP C+K G A ML+EIINYV SLQ
Sbjct: 30 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQ 89
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVEFLSM+L+ + +++
Sbjct: 90 RQVEFLSMKLSTVNPQMEFDVD 111
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 147 GNPERI--IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEI 204
G+ E++ +HVR +RGQATDSHS+AER RREKIN +M+ LQ+LVPGC+K G A +L++I
Sbjct: 178 GDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKI 237
Query: 205 INYVHSLQNQVEFLSMELAAACSSNDLNIET 235
IN+V SLQN+VE LSM+LAA D N+++
Sbjct: 238 INHVQSLQNEVEILSMKLAAVNPVIDFNLDS 268
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E HVRAKRGQAT+SHS+AER RREKIN +M+ LQDLVPGC+K G A ML+EIINYV
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 210 SLQNQVEFLSMELAA 224
SLQ QVEFLSM+L+A
Sbjct: 209 SLQRQVEFLSMKLSA 223
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 68/85 (80%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ
Sbjct: 386 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQ 445
Query: 213 NQVEFLSMELAAACSSNDLNIETES 237
QVE LSM++A+ ++ + ES
Sbjct: 446 RQVESLSMKVASVNPTHSGRLTLES 470
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 70/84 (83%), Gaps = 2/84 (2%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AER RREKI+++M+ LQD+VPGC+K G A +L+EIINY+ SLQ
Sbjct: 139 IHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQ 198
Query: 213 NQVEFLSMELAAACSSNDLNIETE 236
QVEFLSM+L A + ++N ETE
Sbjct: 199 RQVEFLSMKLEAV--NLNMNPETE 220
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Query: 141 SNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S E EE +P + IHVRA+RGQATD HS+AER RREKI+++M+ LQDL+PGC+K +G A
Sbjct: 125 SKETEEKSPLKDYIHVRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKAL 184
Query: 200 MLEEIINYVHSLQNQVEFLSMEL 222
+L+EIINY+ SLQ QVEFLSM+L
Sbjct: 185 VLDEIINYIQSLQRQVEFLSMKL 207
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
Query: 143 EKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
E+E+ P + IHVRA+RGQATDSHS+AERVRREKI ++M+ LQ LVP C+K G A ML
Sbjct: 245 EEEKSEPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALML 304
Query: 202 EEIINYVHSLQNQVEFLSMELA 223
+EIINYV SLQ QVEFLSM+L+
Sbjct: 305 DEIINYVQSLQRQVEFLSMKLS 326
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 67/83 (80%)
Query: 145 EEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEI 204
E+ + IHVRA+RGQATD+HS+AER RREKI+++M+ LQDLVPGC+K +G A +L+ I
Sbjct: 89 EQAPKQDYIHVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGI 148
Query: 205 INYVHSLQNQVEFLSMELAAACS 227
INYV SLQ QVEFLSM+L A S
Sbjct: 149 INYVQSLQRQVEFLSMKLEAVSS 171
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 137 KKVSSNEKEEGNPERI--IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
K+ S+ ++ G+ E++ +HVR +RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K
Sbjct: 180 KRKSAADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKI 239
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET 235
G A +L+EIIN+V SLQ QVE LSM+LAA D ++++
Sbjct: 240 SGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRIDFSLDS 280
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATD+HS+AER RREKIN +M+ LQ+LVPGC K G A +L+EIIN+V +LQ
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQ 242
Query: 213 NQVEFLSMELAAACSSNDLNIE----TESSRKTQGT-NSHEALEMEIWAKEAY 260
QVE LSM LAA D N++ +E+ G+ N+ +++ W + Y
Sbjct: 243 RQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSFNAESYHQLQQWPFDGY 295
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 63/74 (85%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ IHVRA+RGQATD HS+AER RREKI++KM LQD++PGC+K +G A +L+EIINY+
Sbjct: 147 PKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYI 206
Query: 209 HSLQNQVEFLSMEL 222
SLQ QVEFLSM+L
Sbjct: 207 QSLQRQVEFLSMKL 220
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 64/80 (80%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ IHVRA+RGQATD HS+AER RREKI++KM LQD++PGC+K +G A +L+EIINY+
Sbjct: 148 PKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYI 207
Query: 209 HSLQNQVEFLSMELAAACSS 228
SLQ QVEFLSM+L S
Sbjct: 208 QSLQRQVEFLSMKLEVVNSG 227
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 84/125 (67%), Gaps = 7/125 (5%)
Query: 110 KTMCSSASTSETQGDTYKNKKI--RSRRGKKVS-----SNEKEEGNPERIIHVRAKRGQA 162
K + SS S S+ Q K ++ S G K+ + E+ + IHVRA+RGQA
Sbjct: 48 KHIKSSGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQA 107
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
TDSHS+AER RREKI+++M+ LQD+VPGC+K +G A +L+EIINY+ SLQ+QVEFL M+L
Sbjct: 108 TDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFMKL 167
Query: 223 AAACS 227
A S
Sbjct: 168 EAVNS 172
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 6/134 (4%)
Query: 143 EKEEGNPERI--IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
++ GN E + +HVR +RGQATDSHS+AER RREKIN +M+ LQ+LVPGC+K G A +
Sbjct: 146 DENSGNGEELPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALV 205
Query: 201 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET---ESSRKTQGTNSHEALEMEIWAK 257
L++IIN+V SLQ++VE LSM+LAA D N+++ +N + +W +
Sbjct: 206 LDKIINHVQSLQHEVEILSMKLAAVNPIIDFNLDSILAAEGMSLMDSNFPNTVSPAVWPE 265
Query: 258 EAY-GEYTSFHSTW 270
+ G F +W
Sbjct: 266 IPHNGNRQQFQQSW 279
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 63/75 (84%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVR++RGQATDSHS+AER RRE+I ++M+ LQDLVPGC+K +G A L+EIINY+ SLQ
Sbjct: 141 IHVRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQ 200
Query: 213 NQVEFLSMELAAACS 227
QVEFLSM+L A S
Sbjct: 201 CQVEFLSMKLEAVNS 215
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%), Gaps = 5/113 (4%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATD+HS+AER RREKIN +M+ LQ+LVPGC K G +L+EIIN+V +LQ
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQ 242
Query: 213 NQVEFLSMELAAACSSNDLNIE----TESSRKTQGT-NSHEALEMEIWAKEAY 260
QVE LSM LAA D N++ +E+ G+ N+ +++ W + Y
Sbjct: 243 RQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSFNAESYHQLQQWPFDGY 295
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVR +RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K G A +L+EIIN+V +LQ
Sbjct: 171 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQ 230
Query: 213 NQVEFLSMELAAACSSNDLNIE 234
QVE LSM+LAA D N++
Sbjct: 231 RQVEILSMKLAAVNPRIDFNLD 252
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 16/101 (15%)
Query: 153 IHVRAKRGQATDSHSIAERV----------------RREKINKKMRCLQDLVPGCHKDMG 196
IHVRA+RGQATDSHSIAERV RREKI+++M+ LQDLVPGC+K +G
Sbjct: 122 IHVRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVPGCNKMIG 181
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETES 237
A +L+EIINY+ SLQ+QVEFLSM+L A S +LN E
Sbjct: 182 KALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEG 222
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 11/130 (8%)
Query: 133 SRRGK----KVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
+++GK K++ + ++ P +HVRA+RGQATDSHS+AER RREKIN +M L++LV
Sbjct: 168 AKKGKTAEEKLAGGDGDDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELV 226
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-----IETESSRKTQG 243
PGC K G A +L+EIIN+V SLQ QVE+LSM LAA D + TE R G
Sbjct: 227 PGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTTECGR-IAG 285
Query: 244 TNSHEALEME 253
N +++E
Sbjct: 286 FNCKNGIDLE 295
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATD+HS+AER RREKIN +M+ LQ+LVPGC K G A +L+EIIN+V SLQ
Sbjct: 182 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 241
Query: 213 NQVEFLSMELAAACSSNDLNIET 235
QVE LSM LAA + N+++
Sbjct: 242 RQVEMLSMRLAAVNPRVEFNLDS 264
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 14/100 (14%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM------------- 195
P+ IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC+K
Sbjct: 139 PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLV 198
Query: 196 -GMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+L+ D +++
Sbjct: 199 TGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVD 238
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATDSHS+AER RREKIN +M L++LVPGC K G A +L+EIIN+V SLQ
Sbjct: 144 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 203
Query: 213 NQVEFLSMELAAACSSNDLN-----IETESSRKTQGTNSHEALEME 253
QVE+LSM LAA D + TE R T G N +++E
Sbjct: 204 RQVEYLSMRLAAVNPRVDFGGLDNFLTTECGRIT-GLNYKNGMDLE 248
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
Query: 147 GNPERI--IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEI 204
G+ E++ +HVR +RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K G A +L+EI
Sbjct: 196 GDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEI 255
Query: 205 INYVHSLQNQVEFLSMELAAACSSNDLNIET 235
IN+V SLQ QVE LSM+LAA D ++++
Sbjct: 256 INHVQSLQRQVEILSMKLAAVNPRIDFSLDS 286
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 79/122 (64%), Gaps = 7/122 (5%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
+K++ + ++ P +HVRA+RGQATDSHS+AER RREKIN +M L++LVPGC K G
Sbjct: 163 EKLAGGDGDDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSG 221
Query: 197 MAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-----IETESSRKTQGTNSHEALE 251
A +L+EIIN+V SLQ QVE+LSM LAA D + TE R G N ++
Sbjct: 222 TALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTTECGR-IAGFNCKNGID 280
Query: 252 ME 253
+E
Sbjct: 281 LE 282
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATDSHS+AER RREKIN +M L++LVPGC K G A +L+EIIN+V SLQ
Sbjct: 105 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 164
Query: 213 NQVEFLSMELAAACSSNDLN-----IETESSRKTQGTNSHEALEME 253
QVE+LSM LAA D + TE R T G N +++E
Sbjct: 165 RQVEYLSMRLAAVNPRVDFGGLDNFLTTECGRIT-GLNYKNGMDLE 209
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 62/76 (81%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
E +HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K G A +L+EIIN+V
Sbjct: 2 EAYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQ 61
Query: 210 SLQNQVEFLSMELAAA 225
SLQ +VEFLSM LAA
Sbjct: 62 SLQREVEFLSMRLAAV 77
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 8/100 (8%)
Query: 127 KNKKIRSRRG-------KKVSSNEKEEGNPER-IIHVRAKRGQATDSHSIAERVRREKIN 178
KN +R+ G K N P++ IHVRA+RGQATDSHS+AER RREKI+
Sbjct: 92 KNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 151
Query: 179 KKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ+QVEF+
Sbjct: 152 ERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
S +GK++ + + E P+ IHVRA+RGQATDSHS+AERVRREKI ++M+ LQDLVPGC
Sbjct: 236 SGKGKELVAADAEP--PKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCS 293
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEF 217
K G A ML+EIINYV SLQ QVE
Sbjct: 294 KVTGKAVMLDEIINYVQSLQRQVEV 318
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATDSHS+AER RREKIN +M L++LVPGC K G A +L+EIIN+V SLQ
Sbjct: 78 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 137
Query: 213 NQVEFLSMELAAACSSNDLN-----IETESSRKTQGTNSHEALEME 253
QVE+LSM LAA D + +E R T G N +++E
Sbjct: 138 RQVEYLSMRLAAVNPRVDFGGLDSFLTSECGRIT-GLNCKSGMDLE 182
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Query: 128 NKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDL 187
N K S++ K S N + E IHV+A+RG+A ++HS+AERVRREKI+++M+ LQ L
Sbjct: 180 NTKPDSKKAKGGSQNV--QAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQL 237
Query: 188 VPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
VPGCH+ G +L+EIINYV SLQ QVEFLSM+LA+
Sbjct: 238 VPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLASV 275
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 5/100 (5%)
Query: 135 RGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
+GK +KE +HVRA+ QAT+SHSIAE++RREKI+++M+ LQDLVPGC K
Sbjct: 133 KGKGAGERQKEG-----YVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKV 187
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+L+ ++IE
Sbjct: 188 TGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLGVDIE 227
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 62/76 (81%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P +HVRA+RG+ATDSHS+AER RREKI+++M+ LQ LVPGC K +G +L+EIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 209 HSLQNQVEFLSMELAA 224
SLQNQVEFL +LA+
Sbjct: 162 KSLQNQVEFLVGKLAS 177
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 62/76 (81%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P +HVRA+RG+ATDSHS+AER RREKI+++M+ LQ LVPGC K +G +L+EIINYV
Sbjct: 36 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 95
Query: 209 HSLQNQVEFLSMELAA 224
SLQNQVEFL +LA+
Sbjct: 96 KSLQNQVEFLVGKLAS 111
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 62/76 (81%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P +HVRA+RG+ATDSHS+AER RREKI+++M+ LQ LVPGC K +G +L+EIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYV 161
Query: 209 HSLQNQVEFLSMELAA 224
SLQNQVEFL +LA+
Sbjct: 162 KSLQNQVEFLVGKLAS 177
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 62/76 (81%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P +HVRA+RG+ATDSHS+AER RREKI+++M+ LQ LVPGC K +G +L+EIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 209 HSLQNQVEFLSMELAA 224
SLQNQVEFL +LA+
Sbjct: 162 KSLQNQVEFLVGKLAS 177
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 153 IHVRAKRGQATDSHSIAERV--------RREKINKKMRCLQDLVPGCHKDMGMAGMLEEI 204
+HVRA+RGQATD+HS+AERV RREKIN +M+ LQ+LVPGC K G A +L+EI
Sbjct: 127 VHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEI 186
Query: 205 INYVHSLQNQVEFLSMELAAACSSNDLNIET 235
IN+V +LQ QVE LSM LAA D N+++
Sbjct: 187 INHVQTLQRQVEMLSMRLAAVNPRIDFNLDS 217
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 57/65 (87%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRRE+I+++MR LQ+LVPGC K G AGML+EIINYV SLQ
Sbjct: 144 IHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQ 203
Query: 213 NQVEF 217
QVE
Sbjct: 204 KQVEV 208
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM--GMAGMLEEIINYVHS 210
+HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K G A +L++IIN+V S
Sbjct: 30 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQS 89
Query: 211 LQNQVEFLSMELAAACSSNDLN 232
LQ QVEFLSM LAA D +
Sbjct: 90 LQRQVEFLSMRLAAVTPRIDFS 111
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 64/75 (85%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IH+R++RGQAT+SHS+AERVRREKI+++M+ LQDLVPGC+K G A +LE IINYV SLQ
Sbjct: 110 IHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQ 169
Query: 213 NQVEFLSMELAAACS 227
+QVE LS++L + S
Sbjct: 170 SQVEILSVKLTSVLS 184
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 60/80 (75%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+HVRA+RGQATDSHS+AER RREKIN +M L++LVPGC K G A +L+EIIN+V SLQ
Sbjct: 155 VHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQ 214
Query: 213 NQVEFLSMELAAACSSNDLN 232
QVE+LSM LA D
Sbjct: 215 RQVEYLSMRLATVNPRGDFG 234
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Query: 128 NKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDL 187
N K S++ K S N + E IHV+A+RG+A ++HS+AERVRREKI+++M+ LQ L
Sbjct: 180 NTKPDSKKAKGGSQNV--QAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQL 237
Query: 188 VPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
VPGCH+ G +L+EIINYV SLQ QVE LSM+LA+
Sbjct: 238 VPGCHQITGKTVVLDEIINYVQSLQQQVELLSMKLASV 275
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 142 NEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
N+ PE IHVRA++GQATDSHS+ ERVRREKI+++M+ LQ+LVPGC+K G A ML
Sbjct: 119 NKANSKPPEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFML 178
Query: 202 EEIINYVHSLQNQVE 216
+EIINYV SLQ QVE
Sbjct: 179 DEIINYVQSLQRQVE 193
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 75/109 (68%), Gaps = 5/109 (4%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
K + R+R+ KKV+ G +HVRA+RG+ATD HS+AERVRR+KI+ +M+ LQ
Sbjct: 140 KRPEPRARKEKKVAKEHPLTG----YVHVRARRGEATDPHSLAERVRRKKISVRMKLLQS 195
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACS-SNDLNIE 234
LVPGC K G A +L+EII +V SLQNQVEFL+ + + +N++N E
Sbjct: 196 LVPGCDKLTGKAQILDEIIRHVLSLQNQVEFLAAKFTSENGIANEVNYE 244
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 68/102 (66%), Gaps = 6/102 (5%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+RGQATDSHS+AER RREKIN +M L++LVPGC K G A +L+EIIN+V SLQ QVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 217 FLSMELAAACSSNDLN-----IETESSRKTQGTNSHEALEME 253
+LSM LAA D + TE R T G N +++E
Sbjct: 61 YLSMRLAAVNPRVDFGGLDNFLTTECGRIT-GLNYKNGMDLE 101
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 63/85 (74%)
Query: 148 NPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINY 207
N + ++VRA+RG+A DSHS+AERVRR+KI+ KM+ LQ LVPGC K G +L+ IINY
Sbjct: 129 NEDGFVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINY 188
Query: 208 VHSLQNQVEFLSMELAAACSSNDLN 232
+HSLQ+QV+ L ELA + D+N
Sbjct: 189 IHSLQDQVKSLMEELALVDPTFDVN 213
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 59/72 (81%)
Query: 141 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
S EK E + IHVRA+RG+ATDSHS+AERVRRE+I+++M+ L+ LVPGC+K G AGM
Sbjct: 136 SKEKNEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGM 195
Query: 201 LEEIINYVHSLQ 212
L+EIINYV SLQ
Sbjct: 196 LDEIINYVQSLQ 207
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 54/62 (87%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV SLQ Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 215 VE 216
VE
Sbjct: 61 VE 62
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 81/156 (51%), Gaps = 46/156 (29%)
Query: 153 IHVRAKRGQATDSHSIAERV---------------------------------------- 172
IHVRA+RGQATDSHS+AERV
Sbjct: 155 IHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVSV 214
Query: 173 ----RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSS 228
RREKI+++M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QVEFLSM+L A S
Sbjct: 215 YINARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 274
Query: 229 NDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYT 264
+ +E K G + +A M I+ +A EY
Sbjct: 275 MNHTVEG-FPLKDLGVQTFDAAAM-IYGSQATREYA 308
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 79/165 (47%), Gaps = 50/165 (30%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD------------------ 194
+HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHLL 261
Query: 195 -----------------------------MGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
G A +L+EIIN+V SLQ QVE LSM LAA
Sbjct: 262 MISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAAV 321
Query: 226 CSSNDLNIET--ESSRKTQGTNSHEALEMEI-WAKEAYGEYTSFH 267
D N++T S + S A M++ W ++A SFH
Sbjct: 322 NPRIDFNLDTILASENGSLMDGSFNAAPMQLAWPQQAIETEQSFH 366
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 58/80 (72%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E + + I VRA+RGQATDS S+AE VR EKI K+M+ LQDLVPGC K G ML+EII
Sbjct: 2 EYSKQDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEII 61
Query: 206 NYVHSLQNQVEFLSMELAAA 225
NYV SLQ Q E LSM+L A
Sbjct: 62 NYVQSLQCQAESLSMKLGAV 81
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 70/132 (53%), Gaps = 46/132 (34%)
Query: 149 PERIIHVRAKRGQATDSHSIAERV--------------------------------RREK 176
P+ IHVRA+RGQATDSHS+AERV RREK
Sbjct: 151 PKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREK 210
Query: 177 INKKMRCLQDLVPGCHKDM--------------GMAGMLEEIINYVHSLQNQVEFLSMEL 222
I+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+L
Sbjct: 211 ISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKL 270
Query: 223 AAACSSNDLNIE 234
+ D +++
Sbjct: 271 STVNPQLDFDVD 282
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
Query: 133 SRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
++R KK E +P +HVRA+RG+ATDSHS+AERVRRE+I+ KM+ LQ LVPGC
Sbjct: 59 TKRQKKAPPLE----HPTGYVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCD 114
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
+ G A +L+EII YV SL++++ L EL
Sbjct: 115 QITGKALILDEIIRYVQSLKDRIGSLEAELV 145
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 70/132 (53%), Gaps = 46/132 (34%)
Query: 149 PERIIHVRAKRGQATDSHSIAERV--------------------------------RREK 176
P+ IHVRA+RGQATDSHS+AERV RREK
Sbjct: 272 PKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREK 331
Query: 177 INKKMRCLQDLVPGCHKDM--------------GMAGMLEEIINYVHSLQNQVEFLSMEL 222
I+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+L
Sbjct: 332 ISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKL 391
Query: 223 AAACSSNDLNIE 234
+ D +++
Sbjct: 392 STVNPQLDFDVD 403
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 70/132 (53%), Gaps = 46/132 (34%)
Query: 149 PERIIHVRAKRGQATDSHSIAERV--------------------------------RREK 176
P+ IHVRA+RGQATDSHS+AERV RREK
Sbjct: 272 PKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREK 331
Query: 177 INKKMRCLQDLVPGCHKDM--------------GMAGMLEEIINYVHSLQNQVEFLSMEL 222
I+++M+ LQDLVPGC+K G A ML+EIINYV SLQ QVEFLSM+L
Sbjct: 332 ISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKL 391
Query: 223 AAACSSNDLNIE 234
+ D +++
Sbjct: 392 STVNPQLDFDVD 403
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 55/64 (85%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K G A ML+EIINYV LQ
Sbjct: 4 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQ 63
Query: 213 NQVE 216
QVE
Sbjct: 64 RQVE 67
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 137 KKVSSNE-KEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
KK+ +++ K P+ IHVRA+RGQ DSH AERVRREKI++ + LQDLVP +
Sbjct: 2 KKLEADDTKPPEPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRIT 61
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSR 239
G A L+EIINYV SL+ QVE L M+LA +N ES+R
Sbjct: 62 GKADSLDEIINYVQSLKRQVELLYMKLAT------INPRMESNR 99
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Query: 133 SRRGKKVSSNEKEEG----NPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLV 188
SR K+V +K++ P +HVRA+RG+ATDSHS+AERVRREKI+ +M+ LQ LV
Sbjct: 135 SRNAKRVRPAKKQKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLV 194
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
PGC K G A +L+EII+YV L+++V+
Sbjct: 195 PGCDKITGKALVLDEIISYVQFLKDRVQV 223
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 65/105 (61%), Gaps = 29/105 (27%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK------------------- 193
IHVRA+RGQATDSHS+AERVRREKI+++M+ LQDLVPGC K
Sbjct: 276 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYF 335
Query: 194 ------DM----GMAGMLEEIINYVHSLQNQVEFLSMELAAACSS 228
D+ G A ML+EIINYV SLQ QVE + +L +A S+
Sbjct: 336 NFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDLHSALSA 380
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQDLVP +K A ML+EI++YV L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 239
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM L A + L + S K + ++S + +IW K
Sbjct: 240 VKVLSMSRLGGAGAVAQLVADIPISVKGEASDSGS--KQQIWEK 281
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQDLVP +K A ML+EII+YV LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 375
Query: 215 VEFLSMELAAACSSNDLNIETESSRKTQG 243
V+ LSM A + L + TES KT+G
Sbjct: 376 VKVLSMSRVGAPGAV-LPLLTES--KTEG 401
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQDLVP +K A ML+EI++YV L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 190
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM L A + L + S K + ++S + +IW K
Sbjct: 191 VKVLSMSRLGGAGAVAQLVADIPISVKGEASDSGS--KQQIWEK 232
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQDLVP +K A ML+EII+YV LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 340
Query: 215 VEFLSMELAAACSSNDLNIETESSRKTQG 243
V+ LSM A + L + TES KT+G
Sbjct: 341 VKVLSMSRVGAPGAV-LPLLTES--KTEG 366
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P R VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 177 PPRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYV 235
Query: 209 HSLQNQVEFLSM 220
LQ QV+ LSM
Sbjct: 236 KFLQLQVKVLSM 247
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQDLVP +K A ML+EII+YV LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 9/104 (8%)
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREK 176
ST QG Y N V S + G R VRA+RGQATD HSIAER+RRE+
Sbjct: 2 STGSAQGSGYANPG-------GVPSGQPLPGIGARP-RVRARRGQATDPHSIAERLRRER 53
Query: 177 INKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
I ++M+ LQ+LVP +K A ML+EII+YV LQ QV+ LSM
Sbjct: 54 IAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLSM 96
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQDLVP +K A ML+EII+YV LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQDLVP +K A ML+EII+YV LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 74/119 (62%), Gaps = 5/119 (4%)
Query: 136 GKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
G +N G P++ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K
Sbjct: 180 GASAPANGGGSGQPKQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-T 236
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSME-LAAACSSNDLNIETESS-RKTQGTNSHEALEM 252
A ML+EII+YV LQ QV+ LSM L A + L E + + +NS+++L M
Sbjct: 237 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAEGGGDCIQAKRSNSNDSLAM 295
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 124 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 182
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM L A + L + S K + ++S + +IW K
Sbjct: 183 VKVLSMSRLGGAGAVAQLVADIPLSVKGEASDSGS--KQQIWEK 224
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQVQ 202
Query: 215 VEFLSME-LAAACSSNDL--NIETESSRKTQGTNS 246
V+ LSM L A + L N+ E + GT+S
Sbjct: 203 VKVLSMSRLGGAGAVAPLVANMSPEDNGNGDGTSS 237
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 46/56 (82%)
Query: 170 ERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAA 225
ERVRRE+I ++M+ LQ LVPGC+K G AGMLEEIINYV SLQ QVEFLSM+LA
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGV 58
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM L A + L + S K + ++S +IW K
Sbjct: 192 VKVLSMSRLGGAGAVAQLVADIPLSVKGEASDSGG--NQQIWEK 233
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM L A + L + S K + ++S +IW K
Sbjct: 192 VKVLSMSRLGGAGAVAQLVADIPLSVKGEASDS--GGNQQIWEK 233
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 6/94 (6%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
VRA+RGQATD HSIAER+RRE+I ++M+ LQDLVP +K A ML+EI++YV LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 214 QVEFLSM-ELAAACSSNDLNIETESSRKTQGTNS 246
QV+ LSM L +A + L + S +G NS
Sbjct: 62 QVKVLSMSRLGSAAAVPSLVADLPS----EGANS 91
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 122 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDEILDYVKFLRLQ 180
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM L A + L + S K + ++S + +IW K
Sbjct: 181 VKVLSMSRLGGAGAVAQLVADIPLSVKGEASDSGS--KQQIWEK 222
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P R VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYV 256
Query: 209 HSLQNQVEFLSM 220
LQ QV+ LSM
Sbjct: 257 KFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P R VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYV 256
Query: 209 HSLQNQVEFLSM 220
LQ QV+ LSM
Sbjct: 257 KFLQLQVKVLSM 268
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 215 VEFLSME-LAAACSSNDLNIETES 237
V+ LSM L AA + L ET++
Sbjct: 373 VKVLSMSRLGAAEAVVPLLTETQT 396
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 115 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 173
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM L A + L + S K + ++S IW K
Sbjct: 174 VKVLSMSRLGGAGAVAQLVADIPLSVKGEASDSGST--QHIWEK 215
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 215 VEFLSME-LAAACSSNDLNIETES 237
V+ LSM L AA + L ET++
Sbjct: 373 VKVLSMSRLGAAEAVVPLLTETQT 396
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATD HSIAER+RREKI+++M+ LQDLVP +K A ML+EII+YV LQ QV
Sbjct: 316 RARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQV 374
Query: 216 EFLSM 220
+ LSM
Sbjct: 375 KVLSM 379
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I+++++ LQ+LVP C+K A ML+EI++YV L+ Q
Sbjct: 141 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVKFLRLQ 199
Query: 215 VEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM S+ + + +G + IW K
Sbjct: 200 VKVLSMSRLGGASAVAQLVADIPLQSVEGDSGESRSNQRIWDK 242
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP C+K A ML+EI++YV
Sbjct: 52 PQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEIVDYV 110
Query: 209 HSLQNQVEFLSM 220
L+ QV+ LSM
Sbjct: 111 KFLRLQVKVLSM 122
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I+++++ LQ+LVP C+K A ML+EI++YV L+ Q
Sbjct: 142 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVKFLRLQ 200
Query: 215 VEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM S+ + + +G + IW K
Sbjct: 201 VKVLSMSRLGGASAVAQLVADIPLQSVEGDSGESRSNQHIWDK 243
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQDLVP +K A ML+EII++V LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDHVKFLQLQ 378
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 182
Query: 209 HSLQNQVEFLSME-LAAACSSN 229
LQ QV+ LSM L A S++
Sbjct: 183 KFLQLQVKVLSMSRLGGAASAS 204
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 182
Query: 209 HSLQNQVEFLSME-LAAACSSN 229
LQ QV+ LSM L A S++
Sbjct: 183 KFLQLQVKVLSMSRLGGAASAS 204
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 132 PQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYV 190
Query: 209 HSLQNQVEFLSME-LAAACS 227
LQ QV+ LSM L A S
Sbjct: 191 KFLQLQVKVLSMSRLGGAAS 210
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RAKRGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 216 EFLSME-LAAACSSNDL--NIETESSRKTQGTN 245
+ LSM L A + L I +E + GT+
Sbjct: 248 KVLSMSRLGGATAVGTLVAGIASEGNGSGDGTS 280
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LS+ L A + L + S K + ++S +IW K
Sbjct: 192 VKVLSISRLGGAGAVAQLVADIPLSVKGEASDSGG--NQQIWEK 233
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP C+K A ML+EI++YV
Sbjct: 151 PQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYV 209
Query: 209 HSLQNQVEFLSM 220
L+ QV+ LSM
Sbjct: 210 KFLRLQVKVLSM 221
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 194
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 181 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 239
Query: 209 HSLQNQVEFLSME-LAAACSS 228
LQ QV+ LSM L A S+
Sbjct: 240 KFLQLQVKVLSMSRLGGAASA 260
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 247 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 305
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 306 VKVLSM 311
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 196 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 254
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 255 VKVLSM 260
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 199 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 257
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 258 VKVLSM 263
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA+RGQATD HSIAER+RREKI+++M+ LQDLVP +K + ML+EII+YV LQ Q
Sbjct: 320 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQLQ 378
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +RA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYV 190
Query: 209 HSLQNQVEFLSME-LAAACS 227
LQ QV+ LSM L A S
Sbjct: 191 KFLQLQVKVLSMSRLGGAAS 210
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +RA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYV 190
Query: 209 HSLQNQVEFLSME-LAAACS 227
LQ QV+ LSM L A S
Sbjct: 191 KFLQLQVKVLSMSRLGGAAS 210
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 232
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ +RA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYV 190
Query: 209 HSLQNQVEFLSME-LAAACS 227
LQ QV+ LSM L A S
Sbjct: 191 EFLQLQVKVLSMSRLGGAAS 210
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 214 QVEFLSM 220
QV+ LSM
Sbjct: 89 QVKVLSM 95
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P+ VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV
Sbjct: 122 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 180
Query: 209 HSLQNQVEFLSME-LAAACS 227
LQ QV+ LSM L A S
Sbjct: 181 KFLQLQVKVLSMSRLGGAAS 200
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 283
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII YV LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIGYVKFLQLQ 88
Query: 215 VEFLSMEL---AAACSSNDLNIETESSRKTQGT 244
V+ LSM AAA + +I +E GT
Sbjct: 89 VKVLSMSRLGGAAAVAPLVADISSEVRNGNNGT 121
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 7/122 (5%)
Query: 136 GKKVSSNEKEEGNPERI-IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
G+ SS + +P I VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K
Sbjct: 149 GQPTSSAVAAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK- 207
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMELAAACSS-----NDLNIETESSRKTQGTNSHEA 249
A ML+EI++YV L+ QV+ LSM + D+ + + T+G ++ +A
Sbjct: 208 TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQA 267
Query: 250 LE 251
E
Sbjct: 268 WE 269
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 37 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 95
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 96 VKVLSM 101
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 256 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 314
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 315 VKVLSM 320
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 311
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 312 VKVLSM 317
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
Query: 136 GKKVSSNEKEEGNPERI-IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD 194
G+ SS + +P I VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K
Sbjct: 79 GQPTSSAVAAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK- 137
Query: 195 MGMAGMLEEIINYVHSLQNQVEFLSMEL-----AAACSSNDLNIETESSRKTQGTNSHEA 249
A ML+EI++YV L+ QV+ LSM A A D+ + + T+G ++ +A
Sbjct: 138 TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQA 197
Query: 250 LE 251
E
Sbjct: 198 WE 199
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 104 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 162
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 163 VKVLSM 168
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RAKRGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 216 EFLSM-ELAAACSSNDL--NIETESSRKTQGTN 245
+ LSM L A + L ++ +E + GT+
Sbjct: 255 KVLSMSRLGGATAVGPLVASMASEGNGNGNGTS 287
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 8/98 (8%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 217 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 275
Query: 215 VEFLSME----LAAACSSNDLNIETESS---RKTQGTN 245
V+ LS+ AA S ++ TE ++ GTN
Sbjct: 276 VKVLSVSRLGGATAAMPSRLPDLSTEGGTECNQSNGTN 313
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 262
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 263 VKVLSM 268
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 180 VRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKS-DRAAMLDEIVDYVKFLRLQ 238
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 239 VKVLSM 244
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 116 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 174
Query: 215 VEFLSMELAAACSS-----NDLNIETESSRKTQGTNSHEALEMEIWAK 257
V+ LSM + D+ + + G + + +W K
Sbjct: 175 VKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGAPQQQQQQHVWEK 222
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EI++YV LQ Q
Sbjct: 240 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQLQ 298
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 299 VKVLSM 304
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EI++YV LQ Q
Sbjct: 239 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQLQ 297
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 298 VKVLSM 303
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
VRA+RGQATD HSIAER+RR +I ++++ LQ+LVP C+K A ML+EI++YV L+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 77
Query: 214 QVEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIW 255
QV+ LSM L AA + L + S QG + W
Sbjct: 78 QVKVLSMSRLGAAGAVAQLVADVPLS-SVQGEGIEGGANQQAW 119
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII YV LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQ 157
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 158 VKVLSM 163
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA+RGQATD HSIAER+RREKI+++M+ LQDLVP +K + ML+EII+YV LQ Q
Sbjct: 319 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQLQ 377
Query: 215 VEFLSM 220
V+ L M
Sbjct: 378 VKVLCM 383
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII YV LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQ 157
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 158 VKVLSM 163
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RAKRGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 216 EFLSM 220
+ LSM
Sbjct: 254 KVLSM 258
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI ++M+ LQ+LVP +K A ML+EII YV LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQLQ 354
Query: 215 VEFLSME-LAAA 225
V+ LSM L AA
Sbjct: 355 VKVLSMSRLGAA 366
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI ++M+ LQ+LVP K + A ML+EII YV LQ Q
Sbjct: 351 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSK-VDKASMLDEIIEYVKFLQLQ 409
Query: 215 VEFLSMELAAACSSNDLNIETESSRKTQGTNS 246
V+ LSM A + I + + +G+NS
Sbjct: 410 VKVLSMSRLGATGA---VIPLITDGQAEGSNS 438
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 147 GNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
GN VRA+RGQATD HSIAER+RREKI+ +M+ LQ+LVP ++ A ML+EII
Sbjct: 290 GNGAPKPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIE 348
Query: 207 YVHSLQNQVEFLSM 220
YV LQ QV+ LSM
Sbjct: 349 YVKFLQLQVKVLSM 362
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI ++M+ LQ+LVP +K A ML+EII YV LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQLQ 207
Query: 215 VEFLSME-LAAA 225
V+ LSM L AA
Sbjct: 208 VKVLSMSRLGAA 219
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 24 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 82
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEA 249
V+ LSM L A + L + S K + + A
Sbjct: 83 VKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDGGGA 118
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATD HSIAER+RRE+I ++MR LQ+LVP +K A ML+EI++YV L+ QV
Sbjct: 127 RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQV 185
Query: 216 EFLSM-ELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAK 257
+ LSM L A + L + S K + S + +IW K
Sbjct: 186 KVLSMSRLGGAGAVAQLIADIPLSVKGE-EASDSGGKQQIWEK 227
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
VRA+RGQATD HSIAER+RR +I ++++ LQ+LVP C+K A ML+EI++YV L+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 73
Query: 214 QVEFLSM-ELAAACSSNDLNIETE-SSRKTQG 243
Q++ LSM L AA + L + SS K +G
Sbjct: 74 QIKVLSMSRLGAAGAVAQLVADVPLSSIKGEG 105
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATD HSIAER+RREKI+++M+ LQ LVP +K A ML+EII+YV LQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 375
Query: 216 EFLSM 220
+ LSM
Sbjct: 376 KVLSM 380
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATD HSIAER+RREKI+++M+ LQ+LVP +K + ML+EII+YV LQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNK-ADKSSMLDEIIDYVKFLQLQV 380
Query: 216 EFLSM 220
+ LSM
Sbjct: 381 KVLSM 385
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 160 GQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
GQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
Query: 220 ME-LAAACSSNDL--NIETESSRKTQGTNS 246
M L A + L + +ESS GT+S
Sbjct: 228 MSRLGGAAAVGPLAAGLSSESSGNGNGTSS 257
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATD HSIAER+RREKI+++M+ LQ LVP +K A ML+EII+YV LQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 375
Query: 216 EFLSM 220
+ LSM
Sbjct: 376 KVLSM 380
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATD HSIAER+RREKI+++M+ LQ LVP +K A ML+EII+YV LQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 375
Query: 216 EFLSM 220
+ LSM
Sbjct: 376 KVLSM 380
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RGQATD HSIAER+RREKI+++M+ LQ LVP +K A ML+EII+YV LQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 298
Query: 216 EFLSM 220
+ LSM
Sbjct: 299 KVLSM 303
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQ 209
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 210 VKVLSM 215
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RG ATD HSIAER+RREKI ++M+ LQ+LVP +K + A ML+EII YV LQ Q
Sbjct: 240 VRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNK-VDKASMLDEIIEYVKFLQLQ 298
Query: 215 VEFLSME-LAAA 225
V+ LSM L AA
Sbjct: 299 VKVLSMSRLGAA 310
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%), Gaps = 3/70 (4%)
Query: 153 IH--VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHS 210
IH VRA+RGQATD HSIAER+RRE+I+++++ LQ+LVP C+K A +++EI++YV
Sbjct: 130 IHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEILDYVKF 188
Query: 211 LQNQVEFLSM 220
L+ QV+ LSM
Sbjct: 189 LRLQVKVLSM 198
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 175 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQ 233
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 234 VKVLSM 239
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQAT HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 260 VRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 318
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 319 VKVLSM 324
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RREKI+ +M+ LQ+LVP +K A MLEEII Y+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQLQ 340
Query: 215 VEFLSM 220
+ LSM
Sbjct: 341 TKVLSM 346
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 163 VRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKT-DRAAMIDEIVDYVKFLRLQ 221
Query: 215 VEFLSM-ELAAACSSNDL 231
V+ LSM L AA + L
Sbjct: 222 VKVLSMSRLGAAGAVAQL 239
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 12/115 (10%)
Query: 83 VRTVRGNEDVLY----ESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKK 138
V+ +G D + +S + V +Q T +S S E+ N+KI + K
Sbjct: 70 VKKRKGTNDCIALLNPSASSKNVGDQQTEVS-------SQPESNSMERDNRKISPKTQSK 122
Query: 139 VSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
S++ + G E +H+RAKRGQAT+SHS+AER+RR+KI+++M+ LQDLVPGC+K
Sbjct: 123 EDSSDGD-GTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNK 176
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
VRRE+I+++M+ LQ LVPGC+K G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 204 VRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLA 255
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 166 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRLQ 224
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 225 VKVLSM 230
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 171 RVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
+VRRE+I+++MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 77 KVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 130
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINY-VHSL 211
+HVRA+RGQATDSHS+AER RREKIN +M+ LQ+LVPGC K G ++ + + VH L
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHLL 261
Query: 212 ----QNQVEFL---SMELAAACSSNDLNI 233
+ V FL S E CS N L
Sbjct: 262 MISGKKAVNFLWKVSCEDLIDCSFNPLGF 290
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIET----ESSRKTQGTNSHEALE 251
G A +L+EIIN+V SLQ QVE LSM LAA D N++T E+ G+ + ++
Sbjct: 305 GTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNGTPMQ 364
Query: 252 MEIWAKEAYGEYTSFH 267
+ W +A SFH
Sbjct: 365 LA-WPHQAIETEQSFH 379
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRLQ 227
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 228 VKVLSM 233
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM--GMAGMLEEIINYVHSLQ 212
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K M A ML+EII+YV LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 213 NQVE 216
QV+
Sbjct: 310 LQVK 313
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 6/60 (10%)
Query: 152 IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSL 211
IHVRA+RGQATDSHS+AER RREKI ++M+ LQDLVPGC+K ++ + Y S+
Sbjct: 117 FIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNK------LMRPWLGYWQSI 170
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 308
Query: 215 VEFLSM 220
V LSM
Sbjct: 309 V--LSM 312
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 217
Query: 215 VE 216
V+
Sbjct: 218 VK 219
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 42/54 (77%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
M+ LQDLVPGC+K G AGML+EIINYV SLQ QVEFLSM+LAA D NI+
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNID 54
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM--GMAGMLEEIINYVHSLQ 212
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K M A ML+EII+YV LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 213 NQVE 216
QV+
Sbjct: 298 LQVK 301
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
K + E E E IHVRA+RGQAT+SHS+AER+RREKI+++M+ LQDLVPGC K
Sbjct: 235 KGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 291
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 45/65 (69%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQDLVP K A ML+ + Y+ LQNQ
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 215 VEFLS 219
VE LS
Sbjct: 397 VEALS 401
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 40/44 (90%)
Query: 150 ERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
E +HVRAKRGQAT+SHS+AER RREKIN++M+ LQDLVPGC+K
Sbjct: 149 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 192
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 41/54 (75%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
M+ LQDLVPGC+ G AGML+EIINYV SLQ QVEFLSM+LAA D NI+
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNID 54
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 61/107 (57%), Gaps = 29/107 (27%)
Query: 135 RGKKVSSNEKE-----EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
RGK+ + + K+ E E IHVRA+RGQAT+SHS+AER+
Sbjct: 240 RGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERI----------------- 282
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETE 236
G A ML+EIINYV SLQ QVEFLSM+LA + +LNI+ E
Sbjct: 283 -----TGKAVMLDEIINYVQSLQQQVEFLSMKLATV--NPELNIDIE 322
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMR--------CLQDLVPGCH--KDMGMA 198
P+ IHVRA+RGQATDSHS+AERV + + D + + G A
Sbjct: 268 PKDYIHVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVTGKA 327
Query: 199 GMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
ML+EIINYV SLQ QVEFLSM+L+ D +++
Sbjct: 328 VMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVD 363
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 22/108 (20%)
Query: 127 KNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQD 186
K+K +S+ S++ EE E IH+RA+RGQAT+SHS+AER+
Sbjct: 178 KHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERI-------------- 223
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
G A ML+EIINYV SLQ QVEFLSM+LA +++I+
Sbjct: 224 --------TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDID 263
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQDLVP K + ML+ + Y+ LQNQ
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 215 VEFLS 219
VE LS
Sbjct: 415 VETLS 419
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 147 GNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
GN VRA+RGQATD HSIAER+RREKI+ +M+ LQ+LVP ++ A ML+EII
Sbjct: 290 GNGAPKPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIE 348
Query: 207 YVHSLQNQVEFLS 219
YV LQ QV+ S
Sbjct: 349 YVKFLQLQVKVRS 361
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQDLVP K A ML+ + Y+ LQNQ
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 215 VEFLS 219
V+ LS
Sbjct: 400 VQTLS 404
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 40/54 (74%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+LA DLNIE
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 54
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
+HVRA+RGQATD+HS+AER RREKIN +M+ LQ+LVPGC K
Sbjct: 183 VHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDK 223
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 12/126 (9%)
Query: 100 EVTEQSTSISKTMCSSASTS-----ETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIH 154
E +S S ++CS+ E G Y+ ++ G+ S+N + G R+++
Sbjct: 161 EKIPESPIASSSLCSNNDPKRRRREEDDGVDYQTEE----NGEGESTNRRHAGK-GRLMN 215
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
KR ++++ H+++ER RR++IN+KMR LQ+LVP C+K + A MLEE+I Y+ SLQ Q
Sbjct: 216 --KKRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQ 273
Query: 215 VEFLSM 220
V+ +SM
Sbjct: 274 VQAMSM 279
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 53/94 (56%), Gaps = 22/94 (23%)
Query: 141 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
S++ E E IHVRAKRGQAT+SHS+AER+ G A M
Sbjct: 232 SSQTGEAPKEDYIHVRAKRGQATNSHSLAERI----------------------TGKAVM 269
Query: 201 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIE 234
L+EIINYV SLQ QVEFLSM+LA ++ IE
Sbjct: 270 LDEIINYVQSLQRQVEFLSMKLATVYPEMNVQIE 303
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RAKRG AT SIAERVRR KI+++M+ LQDLVP K + ML+E + YV SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 213 NQVEFLS-----MELAAA 225
QV+ LS +E AAA
Sbjct: 441 RQVQELSDTVVRLEAAAA 458
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM-----GMAGMLEEIINYVH 209
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K + A ML+EII+YV
Sbjct: 285 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVK 344
Query: 210 SLQNQ 214
LQ Q
Sbjct: 345 FLQLQ 349
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQDLVP K A ML+ ++Y+ LQ Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 215 VEFLSMELAAACS 227
V+ LS + A C+
Sbjct: 393 VQTLS-DCHAKCT 404
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 24/112 (21%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
IHVRA+RGQATDSHS+AERV +G A +L+EIINY+ SLQ
Sbjct: 155 IHVRARRGQATDSHSLAERV----------------------IGKALVLDEIINYIQSLQ 192
Query: 213 NQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYGEYT 264
QVEFLSM+L A S + +E K G + +A M I+ +A EY
Sbjct: 193 RQVEFLSMKLEAVNSRMNHTVEG-FPLKDLGVQTFDAAAM-IYGSQATREYA 242
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQDLVP K A ML+ ++Y+ LQ Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 215 VEFLSMELAAACS 227
V+ LS + A C+
Sbjct: 390 VQTLS-DCHAKCT 401
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 160 GQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
GQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 220 M 220
M
Sbjct: 323 M 323
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 160 GQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
GQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 220 M 220
M
Sbjct: 323 M 323
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
M+ LQ LVPGCHK G A ML+EIINYV SLQNQVEFLSM+LA+
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLAS 44
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LV +K A ML+EII+YV LQ Q
Sbjct: 145 VRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQLQ 203
Query: 215 VEFLSM 220
V LSM
Sbjct: 204 V--LSM 207
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 216 EFLSM 220
LSM
Sbjct: 299 --LSM 301
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LV +K A ML+EII+YV LQ Q
Sbjct: 117 VRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIIDYVKFLQLQ 175
Query: 215 VEFLSM 220
V LSM
Sbjct: 176 V--LSM 179
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQDLVP K + ML+ ++Y+ LQ Q
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 215 VEFLS 219
VE LS
Sbjct: 399 VETLS 403
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+ ++R LQ+LVP K A ML+E + YV LQNQ
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 215 VEFLS 219
+E LS
Sbjct: 178 IEELS 182
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
M+ LQ LVPGCHK G A ML+EIINYV SLQNQVEFLSM+LA+
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 44
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 7/88 (7%)
Query: 139 VSSNEKEEGNPERI-IHVRA-----KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
+S+N +E + + +H R KR ++T+ H + ER RR++ NKKMR LQDL+P C+
Sbjct: 201 LSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCY 260
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSM 220
KD A +L+E I Y+ +LQ QV+ +SM
Sbjct: 261 KD-DKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 7/88 (7%)
Query: 139 VSSNEKEEGNPERI-IHVRA-----KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
+S+N +E + + +H R KR ++T+ H + ER RR++ NKKMR LQDL+P C+
Sbjct: 201 LSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCY 260
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSM 220
KD A +L+E I Y+ +LQ QV+ +SM
Sbjct: 261 KD-DKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RA RG AT SIAERVRR KI+++M+ LQDLVP + A ML++ + YV LQ Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 215 VEFLSMELA 223
V+ LS +A
Sbjct: 123 VQELSKTVA 131
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S + ++E P R + +KR ++ + H+++ER RR++IN+KMR LQ+L+P C+K + A
Sbjct: 323 SGDGRKEAGPSRT-GLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKAS 380
Query: 200 MLEEIINYVHSLQNQVEFLSM 220
ML+E I Y+ SLQ QV+ +SM
Sbjct: 381 MLDEAIEYLKSLQLQVQIMSM 401
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KRG+A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 217 FLSM 220
+SM
Sbjct: 376 IMSM 379
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KRG+A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 217 FLSM 220
+SM
Sbjct: 376 IMSM 379
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KRG+A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 217 FLSM 220
+SM
Sbjct: 376 IMSM 379
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KRG+A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 217 FLSM 220
+SM
Sbjct: 376 IMSM 379
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KRG+A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
Query: 217 FLSM 220
+SM
Sbjct: 376 IMSM 379
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RAKRG AT SIAERVRR KI+++M+ LQDLVP K + ML+E + YV SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 213 NQVEFLSMELA 223
+V+ LS +A
Sbjct: 90 RKVQELSDTVA 100
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 151 RIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHS 210
RI KR ++T+ H + ER RR++ NKKMR LQD++P C+KD A +L+E + Y+ +
Sbjct: 216 RIRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYKD-DKASLLDEAVKYMRT 274
Query: 211 LQNQVEFLSM 220
LQ+QV+ +SM
Sbjct: 275 LQHQVQMMSM 284
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRK 240
M+ LQDLVPGC+K +G A +L+EIINY+ SLQ QVEFLSM+L A S + IE S K
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEA-SPPK 59
Query: 241 TQGTNSHEALEMEIWAKEAYGEYTSFHSTW 270
G + + M ++ F W
Sbjct: 60 DYGQQTFDLAGMPFVSQATREPSRGFSPEW 89
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S + ++E P R + +KR ++ + H+++ER RR++IN+KMR LQ+L+P C+K + A
Sbjct: 321 SGDGRKEAGPSRT-GLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKAS 378
Query: 200 MLEEIINYVHSLQNQVEFLSM 220
ML+E I Y+ SLQ QV+ +SM
Sbjct: 379 MLDEAIEYLKSLQLQVQIMSM 399
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RAKRG AT SIAERVRR +I+++MR LQDLVP K + ML+ ++Y+ LQ QV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 216 EFLSMELAAACS 227
+ LS E+ A C+
Sbjct: 93 QTLS-EIRARCA 103
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 84 RTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN- 142
+ ++G D R + +Q T+ S ++CS ++++ ++ G SS+
Sbjct: 306 KKIKGKPD------RGKSIDQLTATS-SICSRGASNDPTSSL--ERQYEDTEGTAYSSDD 356
Query: 143 -EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
E+EE P R +KR +AT+ H+++ER RR++INKKMR LQDL+P +K + A ML
Sbjct: 357 LEEEEQVPARG-SAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASML 414
Query: 202 EEIINYVHSLQNQVEFLSM 220
E I+Y+ SLQ QV+ +SM
Sbjct: 415 GEAIDYLKSLQLQVQMMSM 433
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
S + ++E P R + +KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A
Sbjct: 323 SGDGRKEAGPSRT-GLGSKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKAS 380
Query: 200 MLEEIINYVHSLQNQVEFLSM 220
ML+E I Y+ SLQ QV+ +SM
Sbjct: 381 MLDEAIEYLKSLQLQVQIMSM 401
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 13/139 (9%)
Query: 84 RTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN- 142
+ ++G D R + +Q T+ S ++CS ++++ + ++ G SS+
Sbjct: 312 KKIKGKPD------RGKSIDQLTATS-SICSRGASNDPT--SSLERQYEDTEGTAYSSDD 362
Query: 143 -EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
E+EE P R +KR +AT+ H+++ER RR++INKKMR LQDL+P +K + A ML
Sbjct: 363 LEEEEQVPARG-SAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASML 420
Query: 202 EEIINYVHSLQNQVEFLSM 220
E I+Y+ SLQ QV+ +SM
Sbjct: 421 GEAIDYLKSLQLQVQMMSM 439
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 213 NQVEFLSME 221
Q++ L+ E
Sbjct: 242 RQIQELTEE 250
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE ++YV LQ Q
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 215 VEFLS 219
++ L+
Sbjct: 248 IQELT 252
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 213 NQVEFLSME 221
Q++ L+ E
Sbjct: 244 RQIQELTEE 252
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ +RAKRG AT SIAERVRR KI+++MR LQDLVP K A ML+ ++Y+ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 213 NQVEFLSMELAAACS 227
Q + L + A C+
Sbjct: 390 KQAQKL-QDCQAKCT 403
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 45/68 (66%)
Query: 152 IIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSL 211
+ VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV L
Sbjct: 180 LCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFL 239
Query: 212 QNQVEFLS 219
Q Q++ L+
Sbjct: 240 QKQIQELT 247
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+ E G R KRG+ + H+++ER RR++IN+KMR LQ+L+P C+K + A MLE
Sbjct: 310 DDEAGGLRRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLE 368
Query: 203 EIINYVHSLQNQVEFLS-MELAAACSSNDLNIE 234
E I Y+ +LQ QV+ +S M A C L ++
Sbjct: 369 EAIEYLKTLQLQVQMMSTMGTAGMCMPPMLAMQ 401
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV LQ Q
Sbjct: 84 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQ 143
Query: 215 VEFLSMELAAACS 227
+E L ME C+
Sbjct: 144 IEEL-MEHQRKCT 155
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+ E G R KRG+ + H+++ER RR++IN+KMR LQ+L+P C+K + A MLE
Sbjct: 306 DDEAGGLRRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLE 364
Query: 203 EIINYVHSLQNQVEFLS-MELAAACSSNDLNIE 234
E I Y+ +LQ QV+ +S M A C L ++
Sbjct: 365 EAIEYLKTLQLQVQMMSTMGTAGMCMPPMLAMQ 397
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+ E G R KRG+ + H+++ER RR++IN+KMR LQ+L+P C+K + A MLE
Sbjct: 306 DDEAGGLRRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLE 364
Query: 203 EIINYVHSLQNQVEFLS-MELAAACSSNDLNIE 234
E I Y+ +LQ QV+ +S M A C L ++
Sbjct: 365 EAIEYLKTLQLQVQMMSTMGTAGMCMPPMLAMQ 397
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQDLVP A ML+ + Y+ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 215 VEFLSMELAAAC 226
V+ L E A C
Sbjct: 363 VKTLE-ETRARC 373
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKD-MGMAGMLEEIINYVHSLQN 213
VRAKRG AT SIAERVRR +I+++MR LQ+LVP K + +A ML+E + YV SLQ
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 214 QVEFLSMELAAACS 227
QV+ L+ E A C+
Sbjct: 528 QVQELA-ENRAKCT 540
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV +LQ+Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 215 VEFLS 219
++ L+
Sbjct: 241 IQELT 245
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 107 SISKTMC------SSASTSETQGDTYKNKKIRSRR--GKKVSSNEKEEGNPERIIH--VR 156
+IS TM S A +TQ +K ++ RR + E E + ++ I +
Sbjct: 303 AISITMAHGNQPQSVAIRQKTQNSADSSKPLQGRRDAANPLKDAEFESADAKKRIRGSMS 362
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 363 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 421
Query: 217 FLSM 220
+SM
Sbjct: 422 MMSM 425
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 7/125 (5%)
Query: 101 VTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPE-----RIIHV 155
+T + I+ T S S SE + + N R R+ ++ ++ ++ E E R+
Sbjct: 220 MTAPAIEITGTSSSVVSKSEIEPEK-TNVDDRKRKEREATTTDETESRSEETKQARVSTT 278
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
KR +A + H+++ER RR++IN++M+ LQ+L+P C+K A ML+E I Y+ SLQ Q+
Sbjct: 279 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQI 337
Query: 216 EFLSM 220
+ +SM
Sbjct: 338 QMMSM 342
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RAKRG AT SIAERVRR +I+++M+ LQDLVP K + ML+E + YV SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 213 NQVEFLSMELA 223
+V+ L+ +A
Sbjct: 61 MKVKELTETIA 71
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 13/131 (9%)
Query: 100 EVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSN------EKEEGNPERII 153
E +++ S ++CS T QG N+ ++ +R S E+E ++
Sbjct: 366 EKSKEPAVASSSVCSGNGTD--QGSEEPNQNLKRKRKDTDDSECHSEDVEEESAGAKKTA 423
Query: 154 HVRA----KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVH 209
R KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+
Sbjct: 424 GGRGGAGSKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLK 482
Query: 210 SLQNQVEFLSM 220
+LQ QV+ +SM
Sbjct: 483 TLQLQVQIMSM 493
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV +LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 215 VEFLS 219
++ L+
Sbjct: 238 IQELT 242
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 7/125 (5%)
Query: 101 VTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPE-----RIIHV 155
+T + I+ T S S SE + + N R R+ ++ ++ ++ E E R+
Sbjct: 149 MTAPAIEITGTSSSVVSKSEIEPEK-TNVDDRKRKEREATTTDETESRSEETKQARVSTT 207
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
KR +A + H+++ER RR++IN++M+ LQ+L+P C+K A ML+E I Y+ SLQ Q+
Sbjct: 208 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQI 266
Query: 216 EFLSM 220
+ +SM
Sbjct: 267 QMMSM 271
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 7/125 (5%)
Query: 101 VTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPE-----RIIHV 155
+T + I+ T S S SE + + N R R+ ++ ++ ++ E E R+
Sbjct: 220 MTAPAIEITGTSSSVVSKSEIEPEK-TNVDDRKRKEREATTTDETESRSEETKQARVSTT 278
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
KR +A + H+++ER RR++IN++M+ LQ+L+P C+K A ML+E I Y+ SLQ Q+
Sbjct: 279 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQI 337
Query: 216 EFLSM 220
+ +SM
Sbjct: 338 QMMSM 342
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 182 RCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN--IETESSR 239
R LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA D N +
Sbjct: 119 RSLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPK 178
Query: 240 KTQGTNSHEAL 250
+GT +H +
Sbjct: 179 DVRGTRTHNMI 189
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 7/125 (5%)
Query: 101 VTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPE-----RIIHV 155
+T + I+ T S S SE + + N R R+ ++ ++ ++ E E R+
Sbjct: 149 MTAPAIEITGTSSSVVSKSEIEPEK-TNVDDRKRKEREATTTDETESRSEETKQARVSTT 207
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
KR +A + H+++ER RR++IN++M+ LQ+L+P C+K A ML+E I Y+ SLQ Q+
Sbjct: 208 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQI 266
Query: 216 EFLSM 220
+ +SM
Sbjct: 267 QMMSM 271
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 36/207 (17%)
Query: 26 MVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEFLAGCSYNNSFSNFQTDSRIVVPRVRT 85
MV +LKP + + P + +P+ Q+ G N SN V RT
Sbjct: 338 MVPASVDLKPVVAKTMEEPLPAEQSPVICQE-----GACKNEKSSN-------QVLGART 385
Query: 86 VRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKN--KKIRSRRGKKVSSNE 143
+G D E T + ++CS S D N +K R + S +
Sbjct: 386 AKGIPD-------GEKTIEPAVACSSVCSGNSVERASNDPKHNLKRKCRDTEESECPSED 438
Query: 144 KEEGNPERIIHVR----------AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
EE + VR +KR +A + H+++ER RR++IN+KMR LQ+L+P C+K
Sbjct: 439 VEE----ESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK 494
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSM 220
+ A ML+E I Y+ +LQ QV+ +SM
Sbjct: 495 -VDKASMLDEAIEYLKTLQLQVQIMSM 520
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 324
Query: 217 FLSM 220
+SM
Sbjct: 325 MMSM 328
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 42/64 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQDLVP A ML+ + Y+ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 215 VEFL 218
V+ L
Sbjct: 364 VKAL 367
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Query: 136 GKKVSSNEKEEGNPERII-----HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPG 190
G+ SSN E+ N + RA RG ATD S+ R RRE+IN+++R LQ+LVP
Sbjct: 240 GQSCSSNMSEDDNTSKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPN 299
Query: 191 CHKDMGMAGMLEEIINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
K + ++ MLEE +NYV LQ Q++ LS + + A + N L+I
Sbjct: 300 GTK-VDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPFAHNGLDI 344
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+ E G R AKR + + H+++ER RR++IN+KMR LQ+L+P C+K + A MLE
Sbjct: 243 DDEPGATRRSAARSAKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLE 301
Query: 203 EIINYVHSLQNQVEFLSM 220
E I Y+ +LQ QV+ +SM
Sbjct: 302 EAIEYLKTLQLQVQMMSM 319
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQDLVP K A ML+ ++Y+ LQ Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 215 VEFLS 219
+ LS
Sbjct: 342 FKTLS 346
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+ E G R AKR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+
Sbjct: 366 DDESGGMRRSCSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLD 424
Query: 203 EIINYVHSLQNQVEFLSM 220
E I Y+ +LQ QV+ +SM
Sbjct: 425 EAIEYLKTLQLQVQMMSM 442
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQ+LVP K + ML+ + Y+ LQ Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 215 VEFLS 219
V+ LS
Sbjct: 419 VQTLS 423
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 362
Query: 217 FLSM 220
+SM
Sbjct: 363 MMSM 366
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 415
Query: 218 LSM 220
+SM
Sbjct: 416 MSM 418
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI+++MR LQ+LVP K + ML+ + Y+ LQ Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 215 VEFLS 219
V+ LS
Sbjct: 419 VQTLS 423
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 215 VEFLSMELAAA-CSSNDL 231
V+ L+ A+ CS+ +L
Sbjct: 385 VKVLNDGRASCTCSAGEL 402
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 18/125 (14%)
Query: 119 SETQGDTYKNKKIRSRRGKKVSSNEKEEGNPE-------RIIHVRAKRGQATDSHSIAER 171
S+ G+TY + + SS EEGN E + + RA RG ATD S+ R
Sbjct: 151 SDEGGNTYIDTQ-------SSSSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYAR 203
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS---MELAAACSS 228
RRE+IN+++R LQ+LVP K + ++ MLEE + YV LQ Q++ LS M + A +
Sbjct: 204 KRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLSSDDMWMYAPIAY 262
Query: 229 NDLNI 233
N +NI
Sbjct: 263 NGVNI 267
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLA 43
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 215 VEFLSMELAAACSSN 229
V+ LS A SN
Sbjct: 279 VKTLSDNRAKCTCSN 293
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A ML+E + YV LQ Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 215 VEFLS 219
+E LS
Sbjct: 141 IEELS 145
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLA 43
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Query: 136 GKKVSSNEKEEGNPERII-----HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPG 190
G+ SSN E+ N + RA RG ATD S+ R RRE+IN+++R LQ+LVP
Sbjct: 237 GQSSSSNMSEDDNISKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPN 296
Query: 191 CHKDMGMAGMLEEIINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
K + ++ MLEE +NYV LQ Q++ LS + + A + N L+I
Sbjct: 297 GTK-VDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDI 341
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+ E G R AKR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+
Sbjct: 163 DDESGGMRRSCSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLD 221
Query: 203 EIINYVHSLQNQVEFLSM 220
E I Y+ +LQ QV+ +SM
Sbjct: 222 EAIEYLKTLQLQVQMMSM 239
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
M+ LQDLVPGC+K +G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLA 43
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RAKRG AT SIAERVRR +I+++M+ LQDLVP K A ML+E + YV SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 213 NQVEFLSMELA 223
+V L +A
Sbjct: 63 VKVSELQETIA 73
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
Query: 154 HVRA---KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHS 210
H R KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +
Sbjct: 445 HARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKT 503
Query: 211 LQNQVEFLSM 220
LQ QV+ +SM
Sbjct: 504 LQLQVQMMSM 513
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 114 SSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERI-IHVRAKRGQATDSHSIAERV 172
+SAS + D N+ G+ + + +P I VRA+RGQATD HSIAER+
Sbjct: 88 ASASGKRFRDDVVDNRAKHVFHGQPMPTTMPAAPHPPAIRPRVRARRGQATDPHSIAERL 147
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
RRE+I +++R LQ+LVP +K A ML+EI++YV L+ QV+ LSM
Sbjct: 148 RRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 194
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV LQ
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 214 QVEFLS 219
+++ LS
Sbjct: 234 KIQELS 239
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQDLVP K + ML+ ++Y+ LQ Q
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 215 VEFLSMELAAACS 227
+ LS E A C+
Sbjct: 404 FKALS-ENRARCT 415
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 114 SSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERI-IHVRAKRGQATDSHSIAERV 172
+SAS + D N+ G+ + + +P I VRA+RGQATD HSIAER+
Sbjct: 88 ASASGKRFRDDVVDNRAKNVFHGQPMPTTMPAAPHPPAIRPRVRARRGQATDPHSIAERL 147
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
RRE+I +++R LQ+LVP +K A ML+EI++YV L+ QV+ LSM
Sbjct: 148 RRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 194
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQDLVP K A MLE + ++ LQN+
Sbjct: 263 IRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNE 322
Query: 215 VEFLSMEL 222
VE L EL
Sbjct: 323 VEKLHKEL 330
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KRG+ + H+++ER RR++IN+KMR LQ+L+P C+K + A MLEE I Y+ +LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 324
Query: 218 L-SMELAAACSS 228
+ SM AAA +
Sbjct: 325 MSSMGPAAAAAG 336
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A MLEE I Y+ +LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 217 FLSM 220
+SM
Sbjct: 390 MMSM 393
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 82/137 (59%), Gaps = 11/137 (8%)
Query: 89 NEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGN 148
N V+++ + R+ + + + S ++CS + + +KI++ + S+++ E+ +
Sbjct: 333 NNRVVHKDAARKAPDATVTTS-SVCSGNGIVNDEPWHQQKRKIQA----ECSASQDEDLD 387
Query: 149 PERIIHVRA-----KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEE 203
E +R+ KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E
Sbjct: 388 DESGALLRSTNRSMKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDE 446
Query: 204 IINYVHSLQNQVEFLSM 220
I Y+ +LQ QV+ +SM
Sbjct: 447 AIEYLKTLQLQVQMMSM 463
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 92 VLYESSRREVTEQSTSISKTMCSSASTSET---QGDTYKNKKIRSRRGKKVSSNE----K 144
VL +S + T S+ + SS+ S T QG N+ ++ R+ K +E +
Sbjct: 292 VLGDSGTKGQTAAEKSMEPAVASSSVCSGTGADQGSDEPNQNLK-RKTKDTDDSECHSEE 350
Query: 145 EEGNPERIIHVRA----KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
E ++ + KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A M
Sbjct: 351 ESAGAKKTAGGQGGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASM 409
Query: 201 LEEIINYVHSLQNQVEFLSM 220
L+E I Y+ +LQ QV+ +SM
Sbjct: 410 LDEAIEYLKTLQLQVQIMSM 429
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 501
Query: 217 FLSM 220
+SM
Sbjct: 502 IMSM 505
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A ML+E + YV LQ
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 214 QVEFLS 219
Q++ L+
Sbjct: 229 QIQELT 234
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 516
Query: 217 FLSM 220
+SM
Sbjct: 517 IMSM 520
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 511
Query: 217 FLSM 220
+SM
Sbjct: 512 IMSM 515
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR +I+ ++R LQ++VP K A MLEE + YV LQ Q
Sbjct: 168 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQ 227
Query: 215 VEFLS 219
++ L+
Sbjct: 228 IQELT 232
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 522
Query: 217 FLSM 220
+SM
Sbjct: 523 MMSM 526
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 519
Query: 217 FLSM 220
+SM
Sbjct: 520 IMSM 523
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A MLEE I Y+ +LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 217 FLSM 220
+SM
Sbjct: 390 MMSM 393
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A MLEE + YV LQ
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 214 QVEFLS 219
+++ LS
Sbjct: 164 KIQELS 169
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 34/42 (80%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
M+ LQDLVPGC K G A ML+EIINYV SLQ QVEFLSM+L
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 42
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A MLEE I Y+ +LQ QV+
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 173
Query: 217 FLSM 220
+SM
Sbjct: 174 MMSM 177
>gi|388503752|gb|AFK39942.1| unknown [Medicago truncatula]
Length = 73
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 200 MLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEA 259
ML+EIINYV SLQ+QVEFLS++L AA + D N E + Q + EA E+ + ++
Sbjct: 1 MLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSEADDLETMQRARASEAKELARYKRDG 60
Query: 260 YGEYTSFHSTWSL 272
YG + F TW L
Sbjct: 61 YGGISCFQPTWPL 73
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 380
Query: 217 FLSM 220
+SM
Sbjct: 381 IMSM 384
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 18/125 (14%)
Query: 119 SETQGDTYKNKKIRSRRGKKVSSNEKEEGNPE-------RIIHVRAKRGQATDSHSIAER 171
S+ G+TY + + SS EEGN E + + RA RG ATD S+ R
Sbjct: 151 SDEGGNTYIDTQ-------SSSSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYAR 203
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME---LAAACSS 228
RRE+IN+++R LQ+LVP K + ++ MLEE + YV LQ Q++ LS + + A +
Sbjct: 204 KRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLSSDDTWMYAPIAY 262
Query: 229 NDLNI 233
N +NI
Sbjct: 263 NGVNI 267
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RREKIN+++R LQ+LVP K + ++ MLE+ I+YV LQ Q
Sbjct: 198 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQLQ 256
Query: 215 VEFLS---MELAAACSSNDLNIETESSRK 240
++ LS M + A + N L+I ++K
Sbjct: 257 IKLLSSDDMWMYAPIAYNGLDIGVNLNQK 285
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
TD HSIAER+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV+ LSM
Sbjct: 221 TDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 8/102 (7%)
Query: 145 EEGNPERIIHV----RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
+E +P + +++ RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ M
Sbjct: 249 KEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTM 307
Query: 201 LEEIINYVHSLQNQVEFLSME---LAAACSSNDLNIETESSR 239
LEE ++YV LQ Q++ LS + + A + N ++I S R
Sbjct: 308 LEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLSSPR 349
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQDL P K A ML+ + Y+ LQ Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 215 VEFLSMELAAACS 227
V+ L + A C+
Sbjct: 410 VKTLK-DTKAKCT 421
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 8/102 (7%)
Query: 145 EEGNPERIIHV----RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
+E +P + +++ RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ M
Sbjct: 252 KEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTM 310
Query: 201 LEEIINYVHSLQNQVEFLSME---LAAACSSNDLNIETESSR 239
LEE ++YV LQ Q++ LS + + A + N ++I S R
Sbjct: 311 LEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLSSPR 352
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RREKIN+++R LQ+LVP K + ++ MLE+ I+YV LQ Q
Sbjct: 184 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQLQ 242
Query: 215 VEFLS---MELAAACSSNDLNIETESSRK 240
++ LS M + A + N L+I ++K
Sbjct: 243 IKLLSSDDMWMYAPIAYNGLDIGVNLNQK 271
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 8/102 (7%)
Query: 145 EEGNPERIIHV----RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
+E +P + +++ RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ M
Sbjct: 252 KEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTM 310
Query: 201 LEEIINYVHSLQNQVEFLSME---LAAACSSNDLNIETESSR 239
LEE ++YV LQ Q++ LS + + A + N ++I S R
Sbjct: 311 LEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLSSPR 352
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 117 STSETQGDTYKNKKIRSR-----RGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAER 171
+T ET +T K +K+ + G KV N+ G P R+ G+A H + E+
Sbjct: 127 ATMETSTETDKKEKVPTTTEGVVMGNKVMKNKAPAGGPSSW---RSHHGEA---HKLTEK 180
Query: 172 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
RR KIN++++ LQ LVPGC K A L++ I+Y+ SLQ QV+ +S+ LAA
Sbjct: 181 RRRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQQQVQAMSVGLAA 232
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 160 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 219
Query: 215 VEFL 218
V+ L
Sbjct: 220 VKVL 223
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RAKRG ATD S+ R RREKIN++++ LQ+LVP K + + ML+E I+YV LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQV 501
Query: 216 EFL 218
E L
Sbjct: 502 ELL 504
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RG AT SIAER RR +I+++M+ LQDLVP K A ML+E + YV LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 216 EFLS 219
+ LS
Sbjct: 76 KDLS 79
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 143 EKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
+ E G R AKR + + H+++ER RR++IN+KMR LQ+L+P C+K + + MLE
Sbjct: 304 DDEPGATRRSAARSAKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKSSMLE 362
Query: 203 EIINYVHSLQNQVEFLSM 220
E I Y+ +LQ QV+ +SM
Sbjct: 363 EAIEYLKTLQLQVQMMSM 380
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 215 VEFL 218
V+ L
Sbjct: 352 VKVL 355
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A MLEE I Y+ +LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 268
Query: 217 FLSM 220
+SM
Sbjct: 269 MMSM 272
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I+Y+ SLQ QV+
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAISYLKSLQLQVQM 363
Query: 218 LSM 220
+SM
Sbjct: 364 MSM 366
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 10/98 (10%)
Query: 132 RSRRGKKVSSNE-------KEEGNPERIIH--VRAKRGQATDSHSIAERVRREKINKKMR 182
R R+G+ + E E +P++ + KR +A + H+++ER RR++IN+KM+
Sbjct: 278 RKRKGRALDDTECQSEDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMK 337
Query: 183 CLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
LQ+L+P C+K A ML+E I Y+ +LQ QV+ +SM
Sbjct: 338 ALQELIPRCNK-TDKASMLDEAIEYLKTLQLQVQMMSM 374
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 215 VEFL 218
V+ L
Sbjct: 379 VKVL 382
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 215 VEFL 218
V+ L
Sbjct: 378 VKVL 381
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 218 LSM 220
+SM
Sbjct: 368 MSM 370
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 318
Query: 218 LSM 220
+SM
Sbjct: 319 MSM 321
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+L P K A ML+ + Y+ LQ Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 215 VEFLS-MELAAACSS 228
V+ L+ ++ CSS
Sbjct: 231 VKTLNDTKVKCTCSS 245
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 215 VEFLS 219
+ LS
Sbjct: 331 YKTLS 335
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I+K++R LQDLVP K + ML+ ++Y+ LQ+Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 215 VEFLSMELA-AACSSN 229
+E L + +CS++
Sbjct: 360 IEKLKQDQGNCSCSAD 375
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE ++YV LQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 152
Query: 216 EFLS---MELAAACSSNDLNI 233
+ LS M + A + N ++I
Sbjct: 153 KLLSSDDMWMYAPIAYNGMDI 173
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 439
Query: 218 LSM 220
+SM
Sbjct: 440 MSM 442
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 215 VEFLSMELAAACS 227
V+ L E A C+
Sbjct: 345 VKVLK-ETQANCT 356
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+L P K A ML+ + Y+ LQ Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 215 VEFLS-MELAAACSS 228
V+ L+ ++ CSS
Sbjct: 393 VKTLNDTKVKCTCSS 407
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K A ML+ + Y+ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 215 VEFLSMELAAAC 226
+ LS E A C
Sbjct: 360 FKTLS-EKRAKC 370
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 138 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 196
Query: 215 VEFLSME-LAAACSSNDL--NIETESSRKTQGTNSHEALEMEIWAKEA 259
V+ LSM L A + L +I G L E W+ +
Sbjct: 197 VKILSMSRLGGAGAVAPLVTDIPLSPVEDETGEGGRNQLAWEKWSNDG 244
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 215 VEFLSMELAAACS 227
V+ L+ E A+C+
Sbjct: 357 VKALN-ESRASCT 368
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 507
Query: 218 LSM 220
+SM
Sbjct: 508 MSM 510
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 495
Query: 218 LSM 220
+SM
Sbjct: 496 MSM 498
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 273 KRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 331
Query: 218 LSM 220
+SM
Sbjct: 332 MSM 334
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 215 VEFL 218
V+ L
Sbjct: 357 VKVL 360
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
M+ LQ LVPGC+K G A ML+EIINYV SLQ QVEFLSM+LA
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLA 43
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 215 VEFLSMELAAACS 227
V+ L+ E A+C+
Sbjct: 377 VKALN-ESRASCT 388
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I+K++R LQDLVP K + ML+ ++Y+ LQ+Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 215 VEFLSMELA-AACSSN 229
+E L + +C N
Sbjct: 355 IEKLKQDQGNCSCPGN 370
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I+ K++ LQDLVP K A ML+ + ++ LQN+
Sbjct: 279 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 338
Query: 215 VEFLSMEL 222
V+ L+ EL
Sbjct: 339 VQKLNKEL 346
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 215 VEFLSMELAAACS 227
V+ L+ E A+C+
Sbjct: 357 VKALN-ESRASCT 368
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I+ K++ LQDLVP K A ML+ + ++ LQN+
Sbjct: 332 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 391
Query: 215 VEFLSMEL 222
V+ L+ EL
Sbjct: 392 VQKLNKEL 399
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE +NYV LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTK-VDISTMLEEAVNYVKFLQTQ 332
Query: 215 VEFLSM-ELAAACSSNDL 231
++ ++ ++ SS+D+
Sbjct: 333 IKVCTIGDIIYLLSSDDM 350
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 215 VEFLSMELAAAC 226
V+ + A C
Sbjct: 422 VKRNRKKAAIKC 433
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE ++YV LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 345
Query: 215 VEFLS---MELAAACSSNDLNI 233
++ LS M + A + N ++I
Sbjct: 346 IKLLSSDDMWMYAPIAYNGMDI 367
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE ++YV LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 345
Query: 215 VEFLS---MELAAACSSNDLNI 233
++ LS M + A + N ++I
Sbjct: 346 IKLLSSDDMWMYAPIAYNGMDI 367
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++++ LQDL P K A ML+ + Y+ LQ +
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 215 VEFLS-MELAAACSSND 230
V+ LS + C+SN+
Sbjct: 426 VKILSDCKAKCKCTSNE 442
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
M+ LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM+LA
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLA 43
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 215 VEFL 218
V+ L
Sbjct: 129 VKGL 132
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 215 VEFLS 219
+ LS
Sbjct: 90 YKTLS 94
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE ++YV LQ Q
Sbjct: 265 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 323
Query: 215 VEFLSME---LAAACSSNDLNIETESSR 239
++ LS + + A + N ++I S R
Sbjct: 324 IKLLSSDDLWMYAPIAFNGMDIGLSSPR 351
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 215 VEFLSMELAAACS 227
V+ L+ E A+C+
Sbjct: 254 VKALN-ESRASCT 265
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KRG+A + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQV 59
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA RG ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE ++YV LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 275
Query: 216 EFLS---MELAAACSSNDLNI 233
+ LS M + A + N +NI
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNI 296
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RA RG AT SIAERVRR KI+++M+ LQ+LVP + A ML++ + YV LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 215 VEFLSMELA 223
V+ L+ +A
Sbjct: 439 VQELTNTVA 447
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I+K+++ LQDLVP K + ML+ ++Y+ L+++
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 215 VEFLSMELAAAC 226
VE L + A C
Sbjct: 341 VEKLKHDQANCC 352
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
M+ LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM+LA
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLA 43
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ +LQ QV+
Sbjct: 302 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-ADKASMLDEAIEYLKTLQLQVQM 360
Query: 218 LSM 220
+SM
Sbjct: 361 MSM 363
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAERVRR +I+++MR LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 215 VEFL 218
+ L
Sbjct: 345 YKIL 348
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ +LQ QV+
Sbjct: 298 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-ADKASMLDEAIEYLKTLQLQVQM 356
Query: 218 LSM 220
+SM
Sbjct: 357 MSM 359
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 140 SSNEKEEGNPE-------RIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCH 192
SS E+GN E + + RA RG ATD S+ R RRE+IN+++R LQ LVP
Sbjct: 168 SSCTSEDGNFEGNTNSSTKKAYTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGT 227
Query: 193 KDMGMAGMLEEIINYVHSLQNQVEFLSME---LAAACSSNDLNI 233
K + ++ MLEE YV LQ Q++ LS + + A + N +NI
Sbjct: 228 K-VDISTMLEEAAQYVKFLQLQIKLLSSDDTWMYAPIAYNGINI 270
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 215 VEFL 218
V+ L
Sbjct: 378 VKGL 381
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 215 VEFL 218
V+ L
Sbjct: 382 VKGL 385
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 407
Query: 218 LSM 220
++M
Sbjct: 408 MAM 410
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H++AER RREKIN+KM+ LQ+L+P C+K ++ LE++I Y+ SLQ Q++
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVS-TLEDVIEYMKSLQMQIQM 1197
Query: 218 LS 219
+S
Sbjct: 1198 MS 1199
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 57 PEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSA 116
P G S S S +++ + TV G + R E++ +I +T+C A
Sbjct: 1460 PWIPVGSSATTSLSATESNLTPATESLPTVTGGVFHTFSVPSRGGKEKAVAI-QTVCEIA 1518
Query: 117 STSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRA----------KRGQATDSH 166
TS + +T + +I+ ++ + + E I ++ KR +A + H
Sbjct: 1519 GTSSSGVET-EPVRIQPATETDIADGRERKEREETIAGIQGTEEARGSTSRKRSRAAEMH 1577
Query: 167 SIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
++AER RREKIN+KM+ LQ+L+P C+K ++ LE++I YV SL+ Q++ M
Sbjct: 1578 NLAERRRREKINEKMKTLQELIPRCNKSTKVS-TLEDVIEYVKSLEMQIQHYVM 1630
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H++AER RREKIN+KM+ LQ+L+P C+K ++ L+ I YV LQ+Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVS-TLDAAIEYVKWLQSQIQM 193
Query: 218 LSM 220
+ M
Sbjct: 194 ILM 196
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR + + H++AER RREKIN+ ++ LQ+L+P C+K ++ L++ I YV LQ+Q++
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVS-TLDDAIEYVKWLQSQIQM 639
Query: 218 LS 219
+S
Sbjct: 640 MS 641
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 215 VEFLSMELAAACS 227
V+ ++ E A+C+
Sbjct: 367 VKVIN-ESRASCT 378
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 124 DTYKNKKIRSRRGKKVSSNEKEEGNPERI-IHVRAKRGQATDSHSIAERVRREKINKKMR 182
DT +++ G+ + + P + VRA+RGQATD HSIAER+RRE+I +++R
Sbjct: 91 DTRPKNFLQTFHGQPMPTTVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIR 150
Query: 183 CLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME-LAAACSSNDLNIETE-SSRK 240
LQ+LVP +K A ML+EI++YV L+ QV+ LSM L A + L + SS +
Sbjct: 151 ALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVE 209
Query: 241 TQGTNS 246
+G++S
Sbjct: 210 EEGSDS 215
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR ++ + HS++E+ RR++INKKMR LQ+L+P C K + +L+E I+Y+ +LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNC-KKVDKISILDEAIDYLKTLQLQVQ 437
Query: 217 FLSM 220
+SM
Sbjct: 438 VMSM 441
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 44
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 215 VEFL 218
+ L
Sbjct: 339 YKIL 342
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD SI R RRE+IN+++R LQ+LVP K + ++ MLEE ++YV LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQ 265
Query: 215 VEFLS 219
++ LS
Sbjct: 266 IKLLS 270
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K A ML+ + Y+ LQ Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 215 VEFLS 219
+ LS
Sbjct: 331 YKTLS 335
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE YV LQ Q+
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQI 255
Query: 216 EFLS---MELAAACSSNDLNI 233
+ LS M + A + N +NI
Sbjct: 256 KLLSSDDMWMYAPIAYNGINI 276
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR + + H+++ER RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 217
Query: 218 LSM 220
++M
Sbjct: 218 MAM 220
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RG AT SIAER RR +I+K+++ LQDLVP K + ML+ ++Y+ L++Q
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQ 339
Query: 215 VEFLSMELAAAC 226
VE L + A C
Sbjct: 340 VEKLKHDQANCC 351
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 120 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 178
Query: 215 VEFLSME-LAAACSSNDLNIETE-SSRKTQGTNS 246
V+ LSM L A + L + SS + +G++S
Sbjct: 179 VKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSDS 212
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 215 VEFL 218
+ L
Sbjct: 339 YKIL 342
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
MR LQ LVPGC K G A +L+EIINYV SLQNQVEFLSM +A+
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 44
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 215 VEFL 218
+ L
Sbjct: 360 YKIL 363
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 215 VEFL 218
V+ +
Sbjct: 360 VKVI 363
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 146 EGNPERIIHV-----RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
+G PE ++ R KR + + H+++E+ RREKINKKMR L+DL+P C+K + A M
Sbjct: 316 DGEPEDMVKQDREGNRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNK-VDKASM 374
Query: 201 LEEIINYVHSLQNQVE 216
L++ I+Y+ +L+ Q++
Sbjct: 375 LDDAIDYLKTLKLQLQ 390
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
R++RG ATD SI R RREKIN++++ LQ+LVP K + ++ MLEE + YV LQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 305
Query: 216 EFLSME---LAAACSSNDLNI 233
+ LS + + A + N +NI
Sbjct: 306 KLLSSDDLWMYAPIAFNGMNI 326
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K A ML+ + Y+ LQ Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 215 VEFLSMELAAAC 226
+ LS E A C
Sbjct: 354 FKTLS-EKRANC 364
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 144 KEEGNPERIIHV----RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
KE+G + +++ RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++
Sbjct: 222 KEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDIST 280
Query: 200 MLEEIINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
MLEE + YV LQ Q++ LS + + A + N ++I
Sbjct: 281 MLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 317
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 137 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 195
Query: 215 VEFLSME-LAAACSSNDL--NIETESSRKTQGTNSHEALEMEIWAKEA 259
V+ LSM L A + L +I S G E W+ +
Sbjct: 196 VKVLSMSRLGGAGAVAPLVTDIPLSSVEDETGEGGRNQPAWEKWSNDG 243
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 81 PRVRTVRGNEDVLYESSRREVTEQST--SISKTMCSSASTSETQGDTYKNKKIRSRRGKK 138
P V G++ VL S +E + + S S T+ +S++ S G + + + + +
Sbjct: 150 PHVSDAAGDDRVLLPLSSKEARDGRSYHSASATLTTSSAWSRPSGASKRKQCDGAESPGE 209
Query: 139 VSSNEKEEGNPERIIH-----VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
V + E + + AKR +A H+++ER RR++IN+KMR LQ+LVP C+K
Sbjct: 210 VMQQDVESESADVTCETAQKPATAKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK 269
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFL 218
A ML+E I Y+ SLQ Q++ +
Sbjct: 270 -TDKASMLDEAIEYLKSLQLQLQVM 293
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++ER RR++IN++M+ LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 290 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQV 348
Query: 218 LSM 220
+SM
Sbjct: 349 MSM 351
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++ MLEE ++YV LQ Q+
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQLQI 296
Query: 216 EFLS---MELAAACSSNDLNI 233
+ LS M + A + N ++I
Sbjct: 297 KLLSSDEMWMFAPLAYNGMDI 317
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 144 KEEGNPERIIHV----RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
KE+G + +++ RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++
Sbjct: 222 KEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDIST 280
Query: 200 MLEEIINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
MLEE + YV LQ Q++ LS + + A + N ++I
Sbjct: 281 MLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 317
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 127 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 185
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 186 VKVLSM 191
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 131 IRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPG 190
I R ++ E+ G+ R KR +A + H++AER RREKIN++M+ LQ L+P
Sbjct: 126 IAPRSAPRIQGTEEARGSTSR------KRSRAAEMHNLAERRRREKINERMKTLQQLIPR 179
Query: 191 CHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNS 246
C+K ++ MLE++I YV SL+ Q+ +A + I S G
Sbjct: 180 CNKSTKVS-MLEDVIEYVKSLEMQINQFMPHMAMGMNQPPAYIPFPSQAHMAGVGP 234
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 215 VEFL 218
V+ +
Sbjct: 387 VKVM 390
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E +P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P K A ML++ I
Sbjct: 31 ESDPARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAI 89
Query: 206 NYVHSLQNQVEFLSM 220
Y+ LQ QV+ LSM
Sbjct: 90 EYLKQLQLQVQMLSM 104
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 215 VE 216
V+
Sbjct: 348 VK 349
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RAKRG ATD S+ R RRE+IN++++ LQ LVP K + + MLEE I+YV LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAK-VDIVTMLEEAIHYVKFLQLQV 270
Query: 216 EFLSME 221
LS +
Sbjct: 271 NMLSSD 276
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA +G ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE + YV LQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 282
Query: 215 VEFLSME---LAAACSSNDLNI 233
++ LS E + A + N ++I
Sbjct: 283 IKLLSSEDLWMYAPIAYNGMDI 304
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I++++R LQ+LVP K A ML+ ++Y+ LQ Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 215 VEFLS 219
+ LS
Sbjct: 363 FKTLS 367
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ +LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKTLQMQVQ 90
Query: 217 FLSM 220
+ M
Sbjct: 91 MMWM 94
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 114 SSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERI-IHVRAKRGQATDSHSIAERV 172
+S S + D + G+ +S+ +P + VRA+RGQATD HSIAER+
Sbjct: 93 ASGSGKRFRDDVVDGRPKNVYHGQPMSTTMPAAPHPPAMRPRVRARRGQATDPHSIAERL 152
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
RRE+I +++R LQ+LVP +K A ML+EI++YV L+ QV+ LSM
Sbjct: 153 RRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 199
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 217 FLSM 220
+ M
Sbjct: 383 MMWM 386
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++ MLEE + YV LQ Q+
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQLQI 243
Query: 216 EFLSME---LAAACSSNDLNI 233
+ LS + + A + N ++I
Sbjct: 244 KLLSSDDLWMYAPIAYNGMDI 264
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RAKRG ATD SI R RRE+IN+++R LQ LVP K + + MLEE INYV L Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAK-VDIVTMLEEAINYVKFL--QL 294
Query: 216 EFLSME---LAAACSSNDLNI 233
+ LS + + A + N +NI
Sbjct: 295 QLLSSDEYWMYAPTNYNGMNI 315
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++ MLEE + YV LQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQLQ 322
Query: 215 VEFLSME---LAAACSSNDLNI 233
++ LS E + A + N ++I
Sbjct: 323 IKLLSSEDLWMYAPIAYNGMDI 344
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
R+ RG ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE + YV LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283
Query: 216 EFLSME---LAAACSSNDLNIETE 236
+ LS + + + + N +NI E
Sbjct: 284 KLLSSDDTWMYSPIAYNGMNIGLE 307
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K A ML+ + Y+ LQ Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 215 VEFLS 219
L+
Sbjct: 381 YNTLT 385
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 139 VSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
++S+ G P RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++
Sbjct: 237 ITSSSTSNGKP------RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTK-VDIS 289
Query: 199 GMLEEIINYVHSLQNQVEFLS 219
MLEE + YV LQ Q++ LS
Sbjct: 290 TMLEEAVQYVKFLQLQIKLLS 310
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 217 FLSMELAA 224
+ M A
Sbjct: 388 MMWMGSAG 395
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K A ML+ + Y+ LQ Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 215 VEFLS 219
L+
Sbjct: 370 YNTLT 374
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG +TD S+ R RRE+IN++++ LQ LVP K + M+ MLEE ++YV LQ Q
Sbjct: 215 ARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTK-VDMSTMLEEAVHYVKFLQLQ 273
Query: 215 VEFLS---MELAAACSSNDLNI 233
++ LS M + A + N +NI
Sbjct: 274 IKVLSSDDMWMYAPLAYNGMNI 295
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 144 KEEGNPERIIHV----RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
KE+G + +++ RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++
Sbjct: 222 KEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VHIST 280
Query: 200 MLEEIINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
MLEE + YV LQ Q++ LS + + A + N ++I
Sbjct: 281 MLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 317
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE ++YV+ LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVNFLQLQ 330
Query: 215 VEFLS---MELAAACSSNDLNI 233
++ LS + + A + N ++I
Sbjct: 331 IKLLSSDDLWMYAPLAYNGIDI 352
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQDLVP K A ML+ + ++ LQ Q
Sbjct: 208 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQ 267
Query: 215 VEFLSMEL 222
V+ L E+
Sbjct: 268 VQKLHKEM 275
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RG AT SIAER RR +I+K+++ LQDLVP K + ML+ + Y+ L++Q
Sbjct: 152 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELKDQ 211
Query: 215 VEFLSMELAAAC 226
VE L + A C
Sbjct: 212 VEKLKHDQANCC 223
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 97 SRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRR----GKKVSSN--EKEEGNPE 150
S EV+E + ++ K S++ ++ +G + R G +SS+ KE P+
Sbjct: 132 SSLEVSENTRNVRKCPKSASMSNNEEGLMWNGTNNRFSHVDSIGGIISSSLSPKEHEAPK 191
Query: 151 RIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHS 210
RA ATD+ SI R RRE+IN+++R LQ LVP K + ++ MLEE + YV
Sbjct: 192 LGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKF 250
Query: 211 LQNQVEFLS---MELAAACSSNDLNI 233
LQ Q++ LS M + A + N +NI
Sbjct: 251 LQLQIKLLSSEDMWMYAPIAYNGMNI 276
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 217 FLSMELAA 224
+ M A
Sbjct: 388 MMWMGSAG 395
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 132 RSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGC 191
RS G + N ++ P R+ RAKRG AT SIAERVRR +I+++MR LQ+LVP
Sbjct: 5 RSSGGLLAAENLLQDSVPCRL---RAKRGCATHPRSIAERVRRTRISERMRRLQELVPNM 61
Query: 192 HKDMGMAGMLEEIINYVHSLQNQV 215
K + ML+E + Y+ LQ QV
Sbjct: 62 DKQTNTSDMLDEAVEYMKFLQKQV 85
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR ++ + HS++E+ RR++INKKMR LQ+L+P C K + +L+E I+Y+ +LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNC-KKVDKISILDEAIDYLKTLQLQVQ 68
Query: 217 FLSM 220
+SM
Sbjct: 69 VMSM 72
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+LVP K A ML+ + Y+ LQ Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 215 VEFLS 219
L+
Sbjct: 256 YNTLT 260
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA+RG ATD S+ R RREKIN++++ LQ LVP K + + ML+E I+YV LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQLQV 501
Query: 216 EFL 218
L
Sbjct: 502 TLL 504
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 217 FLSM 220
+ M
Sbjct: 373 MMWM 376
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 206
Query: 215 VEFLSM-ELAAACSSNDLNIETESSRKTQ 242
V+ LSM L A + L E S T+
Sbjct: 207 VKVLSMSRLGGAGAVAPLVTEMPLSSSTE 235
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 217 FLSM 220
+ M
Sbjct: 373 MMWM 376
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ +LQ QV+
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 369
Query: 217 FLSM 220
+ M
Sbjct: 370 MMWM 373
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 32/77 (41%)
Query: 149 PERIIHVRAKRGQATDSHSIAER--------------------------------VRREK 176
P+ IHVRA+RGQATDSHS+AER VRREK
Sbjct: 272 PKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREK 331
Query: 177 INKKMRCLQDLVPGCHK 193
I+++M+ LQDLVPGC+K
Sbjct: 332 ISERMKLLQDLVPGCNK 348
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 150 ERIIHV---------RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
E+++HV RAKRG AT SIAER RR +I+ K++ LQDLVP K A M
Sbjct: 63 EKLLHVPEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADM 122
Query: 201 LEEIINYVHSLQNQVEFLSMEL 222
L+ + ++ LQN+VE L E+
Sbjct: 123 LDFAVQHIKGLQNEVEKLHKEM 144
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR KI++++R LQ+LVP K + ML+ ++Y+ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 215 VEFL 218
V+ +
Sbjct: 384 VKVM 387
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 140 SSNEKEEGNPERIIHVR--AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGM 197
S N++EE + +R+ + A+R +A H+ +ER RR++IN+KM+ LQ LVP K
Sbjct: 238 SENQEEEQDTKRVANRSHSARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASK-TDK 296
Query: 198 AGMLEEIINYVHSLQNQVEFLSM 220
A ML+E+I Y+ LQ QV+F+S+
Sbjct: 297 ASMLDEVIEYLKQLQAQVQFMSV 319
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
+S+E + N RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++
Sbjct: 222 NSSEDDNNNASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDIST 280
Query: 200 MLEEIINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
MLEE ++YV LQ Q++ LS + + A + N ++I
Sbjct: 281 MLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 317
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++ER RR++IN+KM+ LQ+L+P +K A ML+E I+Y+ SLQ QV+
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQM 313
Query: 218 LSM 220
+SM
Sbjct: 314 MSM 316
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RAKRG AT SIAER RR +I+K+++ LQDLVP K + ML+ + Y+ LQ Q
Sbjct: 156 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 215
Query: 215 VEFLSMELA-AACS 227
VE L + A CS
Sbjct: 216 VEKLKHDQANCTCS 229
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 154 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 212
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 213 VKVLSM 218
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RAKRG AT SIAER RR +I+K+++ LQDLVP K + ML+ + Y+ LQ Q
Sbjct: 93 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 152
Query: 215 VEFLSMELA-AACS 227
VE L + A CS
Sbjct: 153 VEKLKHDQANCTCS 166
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 140 SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAG 199
+S+E + N RA RG ATD S+ R RRE+IN+++R LQ LVP K + ++
Sbjct: 222 NSSEDDNNNASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDIST 280
Query: 200 MLEEIINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
MLEE ++YV LQ Q++ LS + + A + N ++I
Sbjct: 281 MLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 317
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+L P K A ML+ + ++ LQ Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 215 VEFLSMELAAACS 227
V+ L+ + A C+
Sbjct: 397 VKTLT-DTKAKCT 408
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A ML+EI++YV L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIVDYVKFLRLQ 181
Query: 215 VEFLSME-LAAACSSNDLNIETESSR 239
V+ LSM L A + L E R
Sbjct: 182 VKVLSMSRLGGAGAVAPLEEGGEGGR 207
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 353
Query: 217 FLSM 220
+ M
Sbjct: 354 MMWM 357
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA G ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE + YV LQ Q+
Sbjct: 265 RATTGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 323
Query: 216 EFLS---MELAAACSSNDLNI 233
+ LS + + A + N +NI
Sbjct: 324 KLLSSDDLWMYAPIAYNGINI 344
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 139 VSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
+ S+E E+ P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P K A
Sbjct: 12 LGSSESEQ--PTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKA 68
Query: 199 GMLEEIINYVHSLQNQVEFLSM 220
ML++ I Y+ LQ QV+ LSM
Sbjct: 69 SMLDDAIEYLKQLQLQVQMLSM 90
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E +P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P K A ML++ I
Sbjct: 30 ESDPARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAI 88
Query: 206 NYVHSLQNQVEFLSM 220
Y+ LQ QV+ LSM
Sbjct: 89 EYLKHLQLQVQMLSM 103
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
+R + +N + +G E +KR +A H ++ER RR+KIN+ M+ LQ+L+P C K
Sbjct: 250 KRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK 309
Query: 194 DMGMAGMLEEIINYVHSLQNQVEFLSM 220
+ ML+++I YV SLQ+Q++ SM
Sbjct: 310 T-DRSSMLDDVIEYVKSLQSQIQMFSM 335
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Query: 146 EGNPERIIHV-----RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 200
+G PE ++ R +R + H+++E+ RREKINKKMR L++L+P C+K + A M
Sbjct: 306 DGEPEDMVKQDRDGNRVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNK-VDKASM 364
Query: 201 LEEIINYVHSLQNQVEFLSM 220
L++ I+Y+ +L+ Q++ +SM
Sbjct: 365 LDDAIDYLKTLKLQLQIMSM 384
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E +P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P K A ML++ I
Sbjct: 30 ESDPARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAI 88
Query: 206 NYVHSLQNQVEFLSM 220
Y+ LQ QV+ LSM
Sbjct: 89 EYLKHLQLQVQMLSM 103
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 145 EEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEI 204
E+G+ R A+R ++ + H+ +ER RR+KIN+K++ LQ+L+P C+K ML+E
Sbjct: 2 EDGSAPRRSTPPARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEA 60
Query: 205 INYVHSLQNQVEFLSM 220
I+Y+ SLQ Q++ L M
Sbjct: 61 IDYLKSLQLQLQMLVM 76
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 146 EGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
E +P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P K A ML++ I
Sbjct: 32 ESDPARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAI 90
Query: 206 NYVHSLQNQVEFLSM 220
Y+ LQ QV+ LSM
Sbjct: 91 EYLKHLQLQVQMLSM 105
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN+++R LQ+LVP K + ++ MLEE + YV LQ Q
Sbjct: 237 ARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 295
Query: 215 VEFLSME---LAAACSSNDLNI 233
++ LS + + A + N ++I
Sbjct: 296 IKLLSSDDLWMYAPIAYNGMDI 317
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 197
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 198 VKVLSM 203
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQ+LVP K + ML+ + ++ LQNQ
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 215 VEFLSMEL 222
++ L+ E+
Sbjct: 352 IQKLNKEV 359
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 145 EEGN--PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLE 202
E+G+ P R +R ++ D H+ +ER RR++IN+K+R LQ+L+P C K ML+
Sbjct: 2 EDGSSAPRRSTPAPTRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLD 60
Query: 203 EIINYVHSLQNQVEFLSM 220
E I+Y+ SLQ Q++ L M
Sbjct: 61 EAIDYLKSLQLQLQMLVM 78
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQ+LVP K + ML+ + ++ LQNQ
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 215 VEFL 218
++ L
Sbjct: 352 IQVL 355
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RAKRG AT SIAER RR +I+K+++ LQDLVP K + ML+ + Y+ LQ Q
Sbjct: 309 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 368
Query: 215 VEFLSMELA-AACS 227
VE L + A CS
Sbjct: 369 VEKLKHDQANCTCS 382
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A +L+E I Y+ SLQ QV+
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 286
Query: 218 LSMELAAA 225
+ M A
Sbjct: 287 MWMTTGMA 294
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RAKRG AT SIAER RR +I+K+++ LQDLVP K + ML+ + Y+ LQ Q
Sbjct: 309 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 368
Query: 215 VEFLSMELA-AACS 227
VE L + A CS
Sbjct: 369 VEKLKHDQANCTCS 382
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
H +R +A + H+++ER RR++IN+KMR LQ+L+P C+K A +L+E I Y+ SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQM 281
Query: 214 QVEFLSM 220
QV+ + M
Sbjct: 282 QVQIMWM 288
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 132 RSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGC 191
RS G + N ++ P R+ RAKRG AT SIAERVRR +I+++MR LQ+LVP
Sbjct: 396 RSSGGLLAAENLLQDSVPCRL---RAKRGCATHPRSIAERVRRTRISERMRRLQELVPNM 452
Query: 192 HKDMGM------AGMLEEIINYVHSLQNQVEFL 218
K + + + ML+E + Y+ LQ QV+ L
Sbjct: 453 DKSLAVIQQTNTSDMLDEAVEYMKFLQKQVDDL 485
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 139 VSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
+ S+E E+ P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P K A
Sbjct: 34 LGSSESEQ--PTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKA 90
Query: 199 GMLEEIINYVHSLQNQVEFLSM 220
ML++ I Y+ LQ QV+ LSM
Sbjct: 91 SMLDDAIEYLKQLQLQVQMLSM 112
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+KMR LQ+LVP C+K A +L+E I Y+ SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 303
Query: 218 LSMELAAA 225
+ M A
Sbjct: 304 MWMSTGMA 311
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 139 VSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
+ S+E E+ P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P K A
Sbjct: 34 LGSSESEQ--PTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKA 90
Query: 199 GMLEEIINYVHSLQNQVEFLSM 220
ML++ I Y+ LQ QV+ LSM
Sbjct: 91 SMLDDAIEYLKQLQLQVQMLSM 112
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 145 EEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEI 204
EE P R + +R +A + H+++ER RR++IN+KMR LQ+L+P C+K A +L+E
Sbjct: 309 EETKPSRRYGTK-RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDET 366
Query: 205 INYVHSLQNQVEFLSM 220
I Y+ SLQ QV+ + M
Sbjct: 367 IEYLKSLQMQVQIMWM 382
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A +L+E I Y+ SLQ QV+
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 275
Query: 218 LSMELAAA 225
+ M A
Sbjct: 276 MWMTTGMA 283
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ +LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 320
Query: 217 FLSM 220
+ M
Sbjct: 321 MMWM 324
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ +++ LQDL P K A ML+ + Y+ LQ Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 215 VEFLSMELA-AACSSN 229
V+ L A C+SN
Sbjct: 420 VKILRDTRAKCTCTSN 435
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ +++ LQDLVP K A ML+ + ++ LQ +
Sbjct: 299 IRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGE 358
Query: 215 VEFLSMEL 222
V+ L EL
Sbjct: 359 VQKLHKEL 366
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ +++ LQDL P K A ML+ + Y+ LQ Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 215 VEFLSMELA-AACSSN 229
V+ L A C+SN
Sbjct: 416 VKMLRDTRAKCTCTSN 431
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 83 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 141
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 142 VKVLSM 147
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE + YV LQ Q
Sbjct: 259 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 317
Query: 215 VEFLS---MELAAACSSNDLNI 233
++ LS + + A + N ++I
Sbjct: 318 IKLLSSDDLWMYAPLAYNGMDI 339
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 217 FLSM 220
+ M
Sbjct: 324 MMWM 327
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQLQV 241
Query: 218 LSM 220
+ M
Sbjct: 242 MWM 244
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 150 ERIIH-VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
E + H +RAKRG AT SIAER+RR +I+++++ LQ+L P K A MLE + Y+
Sbjct: 336 EPVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYI 395
Query: 209 HSLQNQVEFLS---MELAAACSS 228
LQ QV+ L+ + +CSS
Sbjct: 396 KGLQRQVKTLTDTKAKCTCSCSS 418
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 217 FLSM 220
+ M
Sbjct: 324 MMWM 327
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 217 FLSM 220
+ M
Sbjct: 333 MMWM 336
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA +G ATD S+ R RREKIN++++ LQ+LVP K + ++ MLEE ++YV LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 226
Query: 216 EFLS---MELAAACSSNDLNI 233
+ LS + + A + N L++
Sbjct: 227 KLLSSDDLWMYAPLAYNGLDM 247
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RA++G A D SIA RVRRE+I+++++ LQ L+P K + M MLE+ I+YV L+
Sbjct: 637 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLE 695
Query: 213 NQVEFL 218
Q++ L
Sbjct: 696 FQIKML 701
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP +K A M++EI++YV L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 215 VEFLSM 220
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
VRA+RGQATD HSIAER+RRE+I ++M+ LQ+LVP +K
Sbjct: 241 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 279
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE + YV LQ Q
Sbjct: 254 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 312
Query: 215 VEFLS---MELAAACSSNDLNI 233
++ LS + + A + N ++I
Sbjct: 313 IKLLSSDDLWMYAPLAYNGMDI 334
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE + YV LQ Q
Sbjct: 255 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 313
Query: 215 VEFLS 219
++ LS
Sbjct: 314 IKLLS 318
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 27/227 (11%)
Query: 22 VNMEMVKHFAELKPSMLEYFNTPNFSLATPLAHQQPEFLAGCSYNNSFSNFQTDSRIVVP 81
N E +H +P + + FS H+QP F +R +P
Sbjct: 41 ANWEAFRHLKTFQPHPSPFLASSEFSGDNKTLHEQP-------LRPEFPVLGDFARRNLP 93
Query: 82 RVRTVRGNEDVLYESSRREVTEQS----TSISKTMCSSASTSETQGDTYKNKKIRSRRGK 137
V + G+E E + R V S +S S S + D+ KK ++
Sbjct: 94 LVSSSVGDETA--EGTERGVCGTSGLSEAGVSGRQSSIGDQSSPRRDSEPCKKKKAHNDT 151
Query: 138 KVSS--NEKEEGN-PERIIHVRA------KRGQATDSHSIAERVRREKINKKMRCLQDLV 188
+ E EEG P + A KR +A + H+++E+ RR +IN+KM+ LQ+L+
Sbjct: 152 DLDDLDCESEEGQEPSEEMSKPAPSRSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLI 211
Query: 189 PGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME----LAAACSSNDL 231
P +K A ML+E I Y+ LQ QV+ LSM+ LA C L
Sbjct: 212 PNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMKSGINLAPMCMPGQL 257
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA +G ATD S+ R RREKIN++++ LQ+LVP K + ++ MLEE ++YV LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 226
Query: 216 EFLS---MELAAACSSNDLNI 233
+ LS + + A + N L++
Sbjct: 227 KLLSSDDLWMYAPLAYNGLDM 247
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQV 89
Query: 218 LSM 220
+ M
Sbjct: 90 MWM 92
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A +L+E I Y+ SLQ QV+
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 391
Query: 218 LSMELAAA 225
+ M A
Sbjct: 392 MWMTTGMA 399
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+KMR LQ+L+P C+K A +L+E I Y+ SLQ QV+
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 375
Query: 218 LSMELAAA 225
+ M A
Sbjct: 376 MWMTTGMA 383
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+ +++ LQ L P K A ML+ + Y+ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 215 VEFLS 219
V+ L+
Sbjct: 379 VQILT 383
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+ +++ LQ L P K A ML+ + Y+ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 215 VEFLS 219
V+ L+
Sbjct: 382 VQILT 386
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-----IET 235
M L++LVPGC K G A +L+EIIN+V SLQ QVE+LSM LAA D + T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTT 60
Query: 236 ESSRKTQGTNSHEALEME 253
E R T G N +++E
Sbjct: 61 ECGRIT-GLNYKNGMDLE 77
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+K+R LQ+LVP C+K A +L+E I Y+ SLQ QV+
Sbjct: 325 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 383
Query: 218 LSM 220
+ M
Sbjct: 384 MWM 386
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 138 KVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGM 197
K+ + E+ G E KR + + H++AER RREKIN+KM+ LQ L+P C+K +
Sbjct: 232 KLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKV 291
Query: 198 AGMLEEIINYVHSLQNQVEFL 218
+ L++ I YV SLQ+Q++ +
Sbjct: 292 S-TLDDAIEYVKSLQSQIQGM 311
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 123 GDTYKNKKIRSRRGKKVSSNEKEEGNPE-------RIIHVRAKRGQATDSHSIAERVRRE 175
GD + + SS E+GN E + RA RG AT+ S+ R RRE
Sbjct: 155 GDADDDGGYACVDTQSSSSCTSEDGNFEGNTNSSSKKTCARASRGAATEPQSLYARKRRE 214
Query: 176 KINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME---LAAACSSNDLN 232
+IN+++R LQ+LVP K + ++ MLEE YV LQ Q++ LS + + A + N +N
Sbjct: 215 RINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQIKLLSCDDTWMYAPIAYNGIN 273
Query: 233 I 233
I
Sbjct: 274 I 274
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RAKRG ATD S+ R RREKIN++++ LQ LVP + + + MLEE I++V L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQ-VDIVTMLEEAIHFVKFLEFQL 529
Query: 216 EFL 218
E L
Sbjct: 530 ELL 532
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RA++G A D SIA RVRRE+I+++++ LQ L+P K + M MLE+ I+YV L+
Sbjct: 820 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLE 878
Query: 213 NQVEFL 218
Q++ L
Sbjct: 879 FQIKML 884
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RA++G A D SIA RVRRE+I+++++ LQ L+P K + M MLE+ I YV L+
Sbjct: 752 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLE 810
Query: 213 NQVEFL 218
Q++ L
Sbjct: 811 LQIKML 816
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+K+R LQ+LVP C+K A +L+E I Y+ SLQ QV+
Sbjct: 226 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 284
Query: 218 LSM 220
+ M
Sbjct: 285 MWM 287
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNK-ADKASMLDEAIEYLKSLQLQLQ 305
Query: 217 FLSM 220
+ M
Sbjct: 306 VVWM 309
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT S+AERVRR +I+++MR LQ++VP K + ML+ + Y+ LQ Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 215 VEFLSMELA 223
++ +S + A
Sbjct: 303 LKTMSAKRA 311
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQ+LVP K A ML+ + ++ LQ+Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 215 VEFLSME 221
++ L E
Sbjct: 201 LQALKHE 207
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+K+R LQ+LVP C+K A +L+E I Y+ SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 283
Query: 218 LSM 220
+ M
Sbjct: 284 MWM 286
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+K+R LQ+LVP C+K A +L+E I Y+ SLQ QV+
Sbjct: 222 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 280
Query: 218 LSM 220
+ M
Sbjct: 281 MWM 283
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RA++G A D SIA RVRRE+I+++++ LQ L+P K + M MLE+ I YV L+
Sbjct: 46 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLE 104
Query: 213 NQVEFL 218
Q++ L
Sbjct: 105 LQIKML 110
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
R KR +A + H+++ER RR++IN+KMR LQ+L+P +K A ML+E I Y+ LQ Q+
Sbjct: 12 RPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQL 70
Query: 216 EFLSMEL 222
+ +EL
Sbjct: 71 QVPKIEL 77
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRA+RGQATD HSIAER+RRE+I +++R LQ+LVP K A M++EI++YV L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDYVKFLRLQ 208
Query: 215 VEFLSME-LAAACSSNDLNIETESSR----KTQGT 244
V+ LSM L A + L E S +TQG
Sbjct: 209 VKVLSMSRLGGAGAVAPLVTEMPLSSSIEDETQGV 243
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+++ER RR++IN+K+R LQ+LVP C+K A +L+E I Y+ SLQ QV+
Sbjct: 401 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 459
Query: 218 LSM 220
+ M
Sbjct: 460 MWM 462
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL--- 218
+ + S+A R RR+KI++++R L+ L+PG +K M A ML+E I YV LQ QV+ L
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNK-MDTATMLDEAIEYVKFLQLQVQILESD 445
Query: 219 SMELAAACSSNDLNIETESSRKTQG 243
+++ A +SN N+ + SR QG
Sbjct: 446 TLDNAPLTASNGQNLPLQGSRAKQG 470
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 145 EEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEI 204
E+G+ R +R ++ + H+ +ER RR+KIN+K++ LQ+L+P C+K ML+E
Sbjct: 2 EDGSAPRRSTPPTRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEA 60
Query: 205 INYVHSLQNQVEFLSM 220
I+Y+ SLQ Q++ L M
Sbjct: 61 IDYLKSLQLQLQMLVM 76
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+++++ LQDL P K A ML+ + ++ LQ Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 215 VEFLSMELA-AACSSND 230
V+ LS A C+ N+
Sbjct: 421 VQILSDRKAKCKCTRNE 437
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 83/142 (58%), Gaps = 14/142 (9%)
Query: 92 VLYESSRR--EVTEQSTSI---SKTMCSSASTSETQGDTYKN---KKIRSRRGKKVSSN- 142
VL ESSR+ EV ++ T + S ++CS + D +N K + S + S +
Sbjct: 347 VLSESSRKGQEVFKKCTELTVASSSVCSDNGVHRSSDDANQNLKRKNLDSEDSEWHSEDF 406
Query: 143 EKEEGNPERIIHVR----AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
E E +R H R +K+ ++T+ H+++ER RR++IN++MR LQ+L+P C+K A
Sbjct: 407 EDESIGVKRTDHGRGVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNK-ADKA 465
Query: 199 GMLEEIINYVHSLQNQVEFLSM 220
ML+E I Y+ SLQ Q++ +SM
Sbjct: 466 SMLDEAIEYLKSLQLQLQIMSM 487
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 140 SSNEKEEGNPERIIH--VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK---- 193
S E E +P++ + KR +A + H+++ER RR++IN+KM+ LQ+L+P C+K
Sbjct: 35 SDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSF 94
Query: 194 ---DMGMAGMLEEIINYVHSLQNQVEFLSM 220
A ML+E I Y+ +LQ QV+ +
Sbjct: 95 TDSQTDKASMLDEAIEYLKTLQLQVQIFVL 124
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+A R AT+S S+ R RRE+IN+++R LQ+LVP K + ++ MLEE + YV LQ Q
Sbjct: 210 AKADRRSATESQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVEYVKFLQLQ 268
Query: 215 VEFLS---MELAAACSSNDLNI 233
++ LS M + A + N +NI
Sbjct: 269 IKLLSSDEMWMYAPIAYNGMNI 290
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR KIN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 80
Query: 217 FLSMELAAACSSNDLNIETESSRKTQ 242
LSM + + L+ E ++ +Q
Sbjct: 81 MLSMRNGVYLNPSYLSGALEPAQASQ 106
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQDLVP K + ML+ + ++ LQ Q
Sbjct: 265 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQ 324
Query: 215 VEFLSMEL 222
V+ L +L
Sbjct: 325 VQKLHEDL 332
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA++G A D SIA R RRE+I+ +++ LQ+LVP K + + MLE+ INYV LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQLQV 417
Query: 216 EFLSME 221
+ L+ +
Sbjct: 418 KVLTSD 423
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQDLVP K A ML+ + ++ LQ++
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 215 VEFLSME 221
++ L E
Sbjct: 322 LQALKHE 328
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQ LVP K A ML+ ++++ LQN+
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 215 VEFL 218
++ L
Sbjct: 203 LQAL 206
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT S+AERVRR +I++K++ L+ L P K A ML+ + Y+ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 215 VEFLS 219
V+ L+
Sbjct: 227 VKTLT 231
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 217 FLSM 220
LSM
Sbjct: 229 MLSM 232
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 69 FSNFQTDSRIVVPR---------VRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTS 119
FSN D R P V+G+E V + R+ + M ++A+ +
Sbjct: 76 FSNPPPDVRFEPPSEDEMAAWLISAIVKGDELVCNDDGGRQPMADDSWDVPMMGTTATAT 135
Query: 120 ETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINK 179
+ K+ + +K + R+ G+A H++ E+ RR KIN+
Sbjct: 136 NKKQKVTPEGKMGTEEMRKAPAGGSS----------RSHHGEA---HNLTEKRRRHKINE 182
Query: 180 KMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAA 224
+++ LQ LVPGC K A L++ I+Y+ SLQ+QV+ +S+ LA+
Sbjct: 183 RLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMSVGLAS 226
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 132 RSRRGKKV--SSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
R+RR +V ++ +K+ G R +A D S+A +VRREKI +K++ LQDLVP
Sbjct: 169 RARRDGEVQAAAAKKQCGGGARKSKAKAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVP 228
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
K + + MLE+ I YV LQ QV+ L+ +
Sbjct: 229 NGTK-VDLVTMLEKAITYVKFLQLQVKVLAAD 259
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQDLVP K + ML+ + ++ LQ+Q
Sbjct: 274 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 333
Query: 215 VEFLSME 221
++ L E
Sbjct: 334 LQNLKKE 340
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 217 FLSM 220
LSM
Sbjct: 229 MLSM 232
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RAKRG AT SIAER RR +I+ K++ LQ+LVP K A ML+ + ++ LQ+Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 215 VEFL 218
VE L
Sbjct: 291 VESL 294
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
++R + H++ E+ RR KIN++++ LQ LVPGC K A L++ I+Y+ SLQ QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKS-NQASTLDQTIHYMKSLQQQVQ 246
Query: 217 FLSMELAA 224
+S+ LAA
Sbjct: 247 AMSVGLAA 254
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQ+LVP K A ML+ + ++ LQ+Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 215 VEFLSME 221
++ L E
Sbjct: 87 LQALKHE 93
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RAKRG AT SIAER RR +I+ K++ LQ+LVP K A ML+ + ++ LQ+Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 215 VE 216
VE
Sbjct: 293 VE 294
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 145 EEGN-PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEE 203
E+G+ P R +R ++ + H+ +ER RR++IN+K++ LQ+L+P C K ML+E
Sbjct: 2 EDGSAPRRSTPPTTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDE 60
Query: 204 IINYVHSLQNQVEFLSM 220
I+Y+ SLQ Q++ L M
Sbjct: 61 AIDYLKSLQLQLQMLVM 77
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RAKRG AT SIAER RR +I+ K++ LQ+LVP K A ML+ + ++ LQ+Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 215 VE 216
VE
Sbjct: 291 VE 292
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R ++ D H+ +ER RR++IN+K+R LQ+L+P C K ++ ML+E I+Y+ SLQ Q++
Sbjct: 16 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQM 74
Query: 218 LSM 220
L M
Sbjct: 75 LVM 77
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RAKRG AT SIAER RR +I+ K++ LQ+LVP K A ML+ + ++ LQ+Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 215 VE 216
VE
Sbjct: 293 VE 294
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A + H+++ER RR++IN+KM+ LQ+L+P C+K A ML+E I Y+ SLQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+A RG A+D S+ R RRE+IN +++ LQ LVP K + ++ MLE+ ++YV LQ Q
Sbjct: 132 AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVKFLQLQ 190
Query: 215 VEFLSME---LAAACSSNDLNI 233
++ LS E + A + N LN+
Sbjct: 191 IKLLSSEDLWMYAPLAHNGLNM 212
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 22/107 (20%)
Query: 115 SASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRG-QATDSHSIAERVR 173
S + ETQ + K K +R EGN R KR + H+++ER R
Sbjct: 181 SDNDEETQENIVKEKPVR-------------EGN-------RVKRSYRNAKVHNLSERKR 220
Query: 174 REKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
R+KIN+K+R L++L+P C+K M A ML++ I+Y+ +L+ Q++ +SM
Sbjct: 221 RDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
H +R +A + H+ +ER RR++IN+KMR LQ+L+P C+K A +L+E I Y+ SLQ
Sbjct: 199 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQM 257
Query: 214 QVEFLSM 220
QV+ + M
Sbjct: 258 QVQVMWM 264
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQDLVP K + ML+ + ++ LQ+Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 215 VEFLSME 221
++ + E
Sbjct: 301 LQAMKHE 307
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
K+ + HS++ER RR+KINKKMR LQ L+P K + A ML++ I Y+ +LQ Q++
Sbjct: 377 KKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDK-VDKASMLDKAIEYLKTLQLQLQM 435
Query: 218 LSMELAAACSSNDLNIET 235
+SM +C + I T
Sbjct: 436 MSMR--GSCYMPPMMIPT 451
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
VRA+RGQATD HSIAER+RREKI ++M+ LQ+LVP +K
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-----IET 235
M L++LVPGC K G A +L+EIIN+V SLQ QVE+LSM LAA D + T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 236 ESSRKTQGTNSHEALEME 253
E R G N +++E
Sbjct: 61 ECGR-IAGFNCKNGIDLE 77
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KM+ LQ+L+P +K A ML+E I Y+ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 217 FLS 219
LS
Sbjct: 75 VLS 77
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
H +R +A + H+ +ER RR++IN+KMR LQ+L+P C+K A +L+E I Y+ SLQ
Sbjct: 228 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQM 286
Query: 214 QVEFLSMELAAA 225
Q++ + M A
Sbjct: 287 QLQIMWMTTGMA 298
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 181 MRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDLN-----IET 235
M L++LVPGC K G A +L+EIIN+V SLQ QVE+LSM LAA D + T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 236 ESSRKTQGTNSHEALEME 253
E R G N +++E
Sbjct: 61 ECGR-IAGFNCKNGIDLE 77
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 154 HVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQN 213
H +R +A + H+ +ER RR++IN+KMR LQ+L+P C+K A +L+E I Y+ SLQ
Sbjct: 190 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNK-ADKASILDEAIEYLKSLQM 248
Query: 214 QVEFLSM 220
QV+ + M
Sbjct: 249 QVQVMWM 255
>gi|297817562|ref|XP_002876664.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
gi|297322502|gb|EFH52923.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P R KR + ++++ ER +R +NKKMR LQDL+P H+D ML+E INY+
Sbjct: 164 PARTRKALVKRKRNAEAYNSPERKQRRDVNKKMRTLQDLLPNSHED-DNESMLDEAINYM 222
Query: 209 HSLQNQVEFLSM 220
+LQ QV+ ++M
Sbjct: 223 KNLQLQVQMMTM 234
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN+KM+ LQ+L+P +K A ML+E I Y+ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 217 FLS 219
LS
Sbjct: 75 VLS 77
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 121 SKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 179
Query: 217 FL 218
+L
Sbjct: 180 YL 181
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 144 KEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEE 203
K+ P RA A D S+ R RRE+IN+++R LQ+LVP K + ++ MLEE
Sbjct: 253 KDPAPPNLDRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEE 311
Query: 204 IINYVHSLQNQVEFLSME---LAAACSSNDLNI 233
+ YV LQ Q++ LS E + A N +NI
Sbjct: 312 AVQYVKFLQLQIKLLSSEDLWMYAPIVYNGINI 344
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 166 HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
H+++ER RR+KIN+K+R L++L+P C+K M A ML++ I+Y+ +L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQDLVP K + ML+ + ++ LQ+Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 215 VEFL 218
++ L
Sbjct: 343 LQNL 346
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAERVRR +I+++MR LQ+L P K A L+ I + LQ Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 215 VEFLSMELAAACS 227
V+ L+ + A C+
Sbjct: 396 VKSLA-DTKAKCT 407
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++E+ RR KIN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 218 LSM 220
LSM
Sbjct: 161 LSM 163
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQDLVP K + ML+ + ++ LQ+Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 215 VEFL 218
++ L
Sbjct: 343 LQNL 346
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
R KR +A + H+++E+ RR KIN+KM+ LQ LVP K A ML++ I Y+ LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKHLQLQV 103
Query: 216 EFLSM 220
+ LSM
Sbjct: 104 QMLSM 108
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 149 PERIIHVR--AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
P + R +KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I
Sbjct: 111 PSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIE 169
Query: 207 YVHSLQNQVEFLSM 220
Y+ LQ QV+ L+M
Sbjct: 170 YLKQLQLQVQMLTM 183
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQ LVP K + ML+ ++++ LQ+Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 215 VEFL 218
++ L
Sbjct: 194 LQTL 197
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR KIN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 217 FLSMELAAACSSNDLNIETESSRKTQ 242
LSM + + L+ E ++ +Q
Sbjct: 158 MLSMRNGVYLNPSYLSGALEPAQASQ 183
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQ LVP K + ML+ ++++ LQ+Q
Sbjct: 285 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 344
Query: 215 VEFL 218
++ L
Sbjct: 345 LQTL 348
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR KIN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 217 FLSMELAAACSSNDLNIETESSRKTQ 242
LSM + + L+ E ++ +Q
Sbjct: 158 MLSMRNGVYLNPSYLSGALEPAQASQ 183
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RAKRG AT SIAER RR +I+ K++ LQDLVP K + ML+ + ++ LQ+Q
Sbjct: 278 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 337
Query: 215 VEFL 218
++ L
Sbjct: 338 LQNL 341
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 193
Query: 217 FLSM 220
LSM
Sbjct: 194 MLSM 197
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RAK+G A D SIA R RRE+I+ +++ LQ+L+P K + + MLE+ INYV LQ
Sbjct: 406 LKPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQ 464
Query: 213 NQVEFL 218
QV+ L
Sbjct: 465 LQVKVL 470
>gi|225898737|dbj|BAH30499.1| hypothetical protein [Arabidopsis thaliana]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P R KR + ++++ ER +R INKKMR LQ+L+P HKD ML+E INY+
Sbjct: 176 PARTRKALVKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKD-DNESMLDEAINYM 234
Query: 209 HSLQNQVEFLSM 220
+LQ QV+ ++M
Sbjct: 235 TNLQLQVQMMTM 246
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ RAK+G A D SIA R RRE+I+ +++ LQ+L+P K + + MLE+ INYV LQ
Sbjct: 406 LKPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQ 464
Query: 213 NQVEFL 218
QV+ L
Sbjct: 465 LQVKVL 470
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R ++ D H+ +ER RR++IN+K++ LQ+L+P C K ++ ML+E I+Y+ SLQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSLQLQLQM 75
Query: 218 LSM 220
L M
Sbjct: 76 LVM 78
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 134 RRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
+R + +N + +G E +KR +A H ++ER RR+KIN+ M+ LQ+L+P C K
Sbjct: 250 KRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK 309
Query: 194 DMGMAGMLEEIINYVHSLQNQVE 216
+ ML+++I YV SLQ+Q++
Sbjct: 310 -TDRSSMLDDVIEYVKSLQSQIQ 331
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ R+++G A D SIA R RRE+I+++++ LQDLVP K + + MLE+ INYV +Q
Sbjct: 231 LKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQ 289
Query: 213 NQVE 216
Q++
Sbjct: 290 LQLQ 293
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A + H+ +ER RR++IN+KM+ LQ+LVP C+K A +L+E I Y+ SLQ QV+
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKS-DKASILDEAIEYLKSLQLQVQI 198
Query: 218 LSM 220
+ M
Sbjct: 199 MWM 201
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++ER RR++IN+KM+ LQ+L+P +K A ML+E I+Y+ SLQ QV+
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQR 313
Query: 218 LSM 220
+ +
Sbjct: 314 VQL 316
>gi|42566136|ref|NP_191768.2| transcription factor PIF6 [Arabidopsis thaliana]
gi|193211499|gb|ACF16169.1| At3g62090 [Arabidopsis thaliana]
gi|332646785|gb|AEE80306.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 346
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P R KR + ++++ ER +R INKKMR LQ+L+P HKD ML+E INY+
Sbjct: 159 PARTRKALVKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKD-DNESMLDEAINYM 217
Query: 209 HSLQNQVEFLSM 220
+LQ QV+ ++M
Sbjct: 218 TNLQLQVQMMTM 229
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
VRAKRG AT SIAER RR +I++K+R LQ LVP K A ML+ ++++ LQ++
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSE 205
Query: 215 VEFL 218
++ L
Sbjct: 206 LQAL 209
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 19/148 (12%)
Query: 92 VLYESSRR--EVTEQSTSI---SKTMCSSASTSETQGDTYKN---KKIRSRRGKKVSSN- 142
VL ESSR+ EV ++ T + S ++CS + D +N K + S + S +
Sbjct: 347 VLSESSRKGQEVFKKCTELTVASSSVCSDNGVHRSSDDANQNLKRKNLDSEDSEWHSEDF 406
Query: 143 EKEEGNPERIIHVR----AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK-DM-- 195
E E +R H R +K+ ++T+ H+++ER RR++IN++MR LQ+L+P C+K D+
Sbjct: 407 EDESIGVKRTDHGRGVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFF 466
Query: 196 ---GMAGMLEEIINYVHSLQNQVEFLSM 220
A ML+E I Y+ SLQ Q++ +SM
Sbjct: 467 LQADKASMLDEAIEYLKSLQLQLQIMSM 494
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 110 KTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRG-QATDSHSI 168
K + + + + G+ + ++ + G V E R I RA+R + + +HS+
Sbjct: 67 KPVAVAVAEDDDSGERWTEDQVPTDEGICVMGRRSESSKERRKI-TRARRSSRYSQTHSL 125
Query: 169 AERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS----MELAA 224
ER RR KIN+ ++ LQ LVPGC K A L++ I Y+ SLQ V+ +S M+ AA
Sbjct: 126 TERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQHVQAMSVGCIMKPAA 185
Query: 225 A 225
A
Sbjct: 186 A 186
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+ +ER RR++IN+KMR LQ L+P +K A MLEE I Y+ SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 217 FLSM 220
+ M
Sbjct: 415 VMWM 418
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQ 212
+ R+++G A D SIA R RRE+I+++++ LQDLVP K + + MLE+ INYV +Q
Sbjct: 231 LKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQ 289
Query: 213 NQVE 216
Q++
Sbjct: 290 LQLQ 293
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 25/169 (14%)
Query: 59 FLAGCSYNNSFSNF--QTDSRIVVPR-VRTVRGNEDVLYESSRREVTEQSTSISKTMCSS 115
FL G + + F+N+ Q I+ PR T +G +D LY S T+ ++
Sbjct: 109 FLEGNNMSYGFTNWNHQHHMDIISPRSTETPQGQKDWLYSDS-------------TVVTT 155
Query: 116 ASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQAT---DSHSIAERV 172
S E+ K RS+ G+ ++K P + +AK T D S+A +
Sbjct: 156 GSRHESMSPKSAGNK-RSQTGESTQPSKK----PNSGVTGKAKPKPTTSPKDPQSLAAKN 210
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
RRE+I+++++ LQ+LVP K + + MLE+ I+YV LQ QV+ L+ +
Sbjct: 211 RRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLATD 258
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 217 FLSM 220
LSM
Sbjct: 213 MLSM 216
>gi|145332927|ref|NP_001078329.1| transcription factor PIF6 [Arabidopsis thaliana]
gi|75301050|sp|Q8L5W7.1|PIF6_ARATH RecName: Full=Transcription factor PIF6; AltName: Full=Basic
helix-loop-helix protein 132; Short=AtbHLH132;
Short=bHLH 132; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 2; AltName: Full=Protein
PHYTOCHROME-INTERACTING FACTOR 6; AltName:
Full=Transcription factor EN 111; AltName: Full=bHLH
transcription factor bHLH132
gi|22535494|dbj|BAC10690.1| PIF3 like basic Helix Loop Helix protein 2 [Arabidopsis thaliana]
gi|332646786|gb|AEE80307.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 363
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P R KR + ++++ ER +R INKKMR LQ+L+P HKD ML+E INY+
Sbjct: 176 PARTRKALVKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDN-ESMLDEAINYM 234
Query: 209 HSLQNQVEFLSM 220
+LQ QV+ ++M
Sbjct: 235 TNLQLQVQMMTM 246
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 200
Query: 217 FLSM 220
L+M
Sbjct: 201 MLTM 204
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
D S+A R RRE+I+++MR LQ LVPG K M A ML+E I+YV L+ QV+ S+E A
Sbjct: 166 DPQSVAARHRRERISERMRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQ--SLEQA 222
Query: 224 AACSSN 229
A + N
Sbjct: 223 GANTPN 228
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA++G A D SIA R RRE+I+ +++ LQ+LVP K + + MLE+ INYV LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQLQV 417
Query: 216 E 216
+
Sbjct: 418 K 418
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
V KR +A H+ +ER RR+KIN++M+ LQ LVP K A ML+E+I Y+ LQ Q
Sbjct: 277 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 335
Query: 215 VEFLS 219
V+ +S
Sbjct: 336 VQMMS 340
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+++E+ RR +IN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 217
Query: 218 LSM 220
LSM
Sbjct: 218 LSM 220
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 137 KKVSSNEKEEGNPERIIHVR-------AKRGQATDSHSIAERVRREKINKKMRCLQDLVP 189
+K++ ++ + PE ++ + KR + H++ ER RR+KINK+MR L++L+P
Sbjct: 720 RKITVTQENDEEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILKELIP 779
Query: 190 GCHKDMGMAGMLEEIINYVHSLQNQVE 216
C+K A ML++ I Y+ +L+ Q++
Sbjct: 780 NCNK-TDKASMLDDAIEYLKTLKLQIQ 805
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR ++ + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 217 FLSM 220
LSM
Sbjct: 251 MLSM 254
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA +G ATD S+ R RREKIN++++ LQ+LVP K + ++ MLEE ++YV LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 226
Query: 216 E 216
+
Sbjct: 227 K 227
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 139 VSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMA 198
+ S+E E+ P R R KR +A + H+++E+ RR +IN+KM+ LQ L+P K A
Sbjct: 12 LGSSESEQ--PTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKA 68
Query: 199 GMLEEIINYVHSLQNQVEFL 218
ML++ I Y+ LQ QV+ +
Sbjct: 69 SMLDDAIEYLKQLQLQVQMI 88
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D SIA R+RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+ L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
RA RG ATD S+ R RRE+IN++++ LQ +VP K + ++ MLEE ++YV LQ Q
Sbjct: 270 TRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTK-VDISTMLEEAVHYVKFLQLQ 328
Query: 215 VE 216
++
Sbjct: 329 IK 330
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 150 ERIIHVRAKRGQ---ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
E I+ +R KR + D S+A R RRE+I+ ++R LQ VPG K M A ML+E I+
Sbjct: 374 EEIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTK-MDTASMLDEAIH 432
Query: 207 YVHSLQNQVEFL 218
YV LQ Q++ L
Sbjct: 433 YVKFLQQQLQTL 444
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A + H+ +ER RR++IN+KMR LQ+L+P +K A MLEE I Y+ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLEEAIEYLKMLQLQLQ 77
Query: 217 F 217
Sbjct: 78 V 78
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQ--DLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
A+R +A + H+++ER RR++IN+KMR LQ +L+P C+K A ML+E I Y+ SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKT-DKASMLDEAIEYLKSLQLQ 220
Query: 215 VEFLSM 220
+ + M
Sbjct: 221 LRVMWM 226
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I+YV L+ QV+ S+E A
Sbjct: 154 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKTQVQ--SLERA 210
Query: 224 AA 225
AA
Sbjct: 211 AA 212
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 26/109 (23%)
Query: 163 TDSHSIAERV----------------------RREKINKKMRCLQDLVPGCHKDMGMAGM 200
TD HSIAERV RRE+I ++M+ LQ+LVP +K A M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 201 LEEIINYVHSLQNQVEFLSME-LAAACSSNDL--NIETESSRKTQGTNS 246
L+EII+YV LQ QV+ LSM L A + L N+ +ES+ T+S
Sbjct: 279 LDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMSSESNGNGNATSS 327
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 26/109 (23%)
Query: 163 TDSHSIAERV----------------------RREKINKKMRCLQDLVPGCHKDMGMAGM 200
TD HSIAERV RRE+I ++M+ LQ+LVP +K A M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 201 LEEIINYVHSLQNQVEFLSME-LAAACSSNDL--NIETESSRKTQGTNS 246
L+EII+YV LQ QV+ LSM L A + L N+ +ES+ T+S
Sbjct: 278 LDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMSSESNGNGNATSS 326
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR ++ + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 217 FLSM 220
LSM
Sbjct: 251 MLSM 254
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 160 GQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
G ATD S+ R RREKIN++++ LQ+LVP K + + ML+E I+YV LQNQVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAK-VDIVTMLDEAIHYVKFLQNQVELL 58
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 217 FLSM 220
LSM
Sbjct: 161 MLSM 164
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 26/109 (23%)
Query: 163 TDSHSIAERV----------------------RREKINKKMRCLQDLVPGCHKDMGMAGM 200
TD HSIAERV RRE+I ++M+ LQ+LVP +K A M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 201 LEEIINYVHSLQNQVEFLSME-LAAACSSNDL--NIETESSRKTQGTNS 246
L+EII+YV LQ QV+ LSM L A + L N+ +ES+ T+S
Sbjct: 279 LDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMSSESNGNGNATSS 327
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR ++ + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 217 FLSM 220
LSM
Sbjct: 251 MLSM 254
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 31/147 (21%)
Query: 122 QGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSI------------- 168
+G T+ + + GK + KE P+ +A G ATD+ SI
Sbjct: 6 EGLTWHDSSLEQNGGKPSILSPKEHEAPKLCRKSKAGSGPATDAQSIYLCKSKSPLKDIS 65
Query: 169 AERV-----------------RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSL 211
R+ RRE+IN+++R LQ LVP K + ++ MLEE + YV L
Sbjct: 66 LVRIWIQVNYAESQYVIMILRRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFL 124
Query: 212 QNQVEFLSMELAAACSSNDLNIETESS 238
Q Q++ LSM + A + N +NI + S
Sbjct: 125 QLQIKLLSMWMYAPIAYNGMNIGLDLS 151
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
RA R T+ SI R RRE+IN++++ LQ+LVP K + ++ MLEE ++YV LQ Q+
Sbjct: 227 RAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQI 285
Query: 216 EFLSME---LAAACSSNDLNI 233
LS + + A + N +NI
Sbjct: 286 RLLSSDDTWMYAPIAYNGMNI 306
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 150 ERIIHVRAKRGQ---ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIIN 206
E I R KR + D+ S+A R RRE+I+ ++R LQ LVPG K M A ML+E I+
Sbjct: 355 EDIASSRPKRRNVRISIDTQSVAARHRRERISDRIRVLQRLVPGGTK-MDTASMLDEAIH 413
Query: 207 YVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHEALEMEIWAKEAYG-EYTS 265
Y+ L+ Q++ L C D+ + EAL++ + A+ YTS
Sbjct: 414 YIKFLKQQLQTLEQLGIDGCDPGDVALR-----------GGEALQLSSSVRPAFHMNYTS 462
Query: 266 FHSTW 270
+W
Sbjct: 463 AFQSW 467
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 217 FLS 219
LS
Sbjct: 211 MLS 213
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
V KR +A H+ +ER RR+KIN++M+ LQ LVP K A ML+E+I Y+ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 215 VEFLS 219
V +S
Sbjct: 266 VSMMS 270
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
V KR +A H+ +ER RR+KIN++M+ LQ LVP K A ML+E+I Y+ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 215 VEFLS 219
V +S
Sbjct: 266 VSMMS 270
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
A+R ++H++ E+ RR KI+ K++ L+ LVPGC A +L++ I ++ SLQ Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
Query: 217 FLSMELAAACSS 228
++ C +
Sbjct: 79 VQPKAISLGCDA 90
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
+TD ++A R RRE+IN+K+R LQ LVPG K M A ML+E NY+ L++QV+ L
Sbjct: 341 STDPQTVAARHRRERINEKIRVLQKLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 396
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
++R +A + H+ +ER RR++IN+KMR LQ L+P +K A MLEE I Y+ SLQ Q++
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 217 FLSM 220
+ M
Sbjct: 415 VMWM 418
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 21/153 (13%)
Query: 93 LYESSRREVTE----QSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEG- 147
LY+ SR+E+ + Q S + + T+ G + N S +E G
Sbjct: 70 LYDDSRQELVKPRKKQKISSESNLVTEPKTAWRDGQSLSNYN--------SSDDENALGL 121
Query: 148 --NPERIIHVRAK--RGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEE 203
N + + +AK +G A+D S+ R RRE+IN +++ LQ LVP K + ++ MLE+
Sbjct: 122 VSNTSKSLKRKAKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLED 180
Query: 204 IINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
++YV LQ Q++ LS + + A + N LN+
Sbjct: 181 AVHYVKFLQLQIKLLSSDDLWMYALLAHNGLNM 213
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 132 RSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGC 191
R G+ + + +K+ N + ++ G A D SIA + RRE+I+++++ LQDLVP
Sbjct: 208 RPNMGESMQALKKQCNNATKKPKPKSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNG 267
Query: 192 HKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
K + + MLE+ I+YV LQ QV+ L+ +
Sbjct: 268 SK-VDLVTMLEKAISYVKFLQLQVKVLATD 296
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 31/135 (22%)
Query: 129 KKIRSRRGKKVSSNEKEEGN---------------------PERIIHVR----AKRGQ-- 161
KK S+RGKK + E E+G+ E + + A+ G
Sbjct: 168 KKAGSKRGKKAAQCEGEDGSIAVTNRQSLSCCTSENDSIGSQESPVAAKSNGKAQSGHRS 227
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS-- 219
ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE ++YV LQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLSSD 286
Query: 220 -MELAAACSSNDLNI 233
M + A + N +NI
Sbjct: 287 EMWMYAPIAYNGMNI 301
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 31/135 (22%)
Query: 129 KKIRSRRGKKVSSNEKEEGN---------------------PERIIHVR----AKRGQ-- 161
KK S+RGKK + E E+G+ E + + A+ G
Sbjct: 168 KKAGSKRGKKAAQCEGEDGSIAVTNRQSLSCCTSENDSIGSQESPVAAKSNGKAQSGHRS 227
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS-- 219
ATD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE ++YV LQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLSSD 286
Query: 220 -MELAAACSSNDLNI 233
M + A + N +NI
Sbjct: 287 EMWMYAPIAYNGMNI 301
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R+RRE+I++K+R LQ LVPG K M A MLEE I YV L+ Q+ L
Sbjct: 113 DPQSVAARLRRERISEKIRILQRLVPGGRK-MDTASMLEEAIRYVKFLKRQIRLL 166
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 21/110 (19%)
Query: 144 KEEGNPERIIHV----RAKRGQATDSHSIAERV-------------RREKINKKMRCLQD 186
KE+G + +++ RA RG ATD S+ R+ RRE+IN+++R LQ
Sbjct: 222 KEDGEDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQH 281
Query: 187 LVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS---MELAAACSSNDLNI 233
LVP K + ++ MLEE + YV LQ Q++ LS + + A + N ++I
Sbjct: 282 LVPNGTK-VDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 330
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
D SIA R RRE+I++K+R LQ +VPG K M A ML+E I+YV L+ Q++ L E A
Sbjct: 180 DPQSIAARHRRERISEKIRILQRMVPGGTK-MDTASMLDEAIHYVKFLKTQLKSL-QERA 237
Query: 224 AACSSN 229
+ +SN
Sbjct: 238 SGANSN 243
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR KIN+K++ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 87 SKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 145
Query: 217 FL 218
L
Sbjct: 146 ML 147
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
V KR +A H+ +ER RR+KIN++M+ LQ LVP K A ML+E+I Y+ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 322
Query: 215 VEFL 218
V+ +
Sbjct: 323 VQMM 326
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A H+ +ER RR++IN+KM+ LQ LVP K A ML+E+I Y+ LQ QV+
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 240
Query: 218 LSM 220
+S+
Sbjct: 241 MSV 243
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 40/141 (28%)
Query: 129 KKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQA-------------------------- 162
+K +R KKV+ +E E+G + A +GQ+
Sbjct: 168 RKAEPKRAKKVTHHEGEDGT------IAATKGQSMSCCTSENDSNGSQESPVAANPSGKG 221
Query: 163 ----TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
TD S+ R RRE+IN++++ LQ+LVP K + ++ MLEE + YV LQ Q++ L
Sbjct: 222 RQSTTDPQSLYARKRRERINERLKVLQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLL 280
Query: 219 S---MELAAACSSNDLNIETE 236
S M + A + N +NI +
Sbjct: 281 SSDDMWMYAPIAYNGMNIGVD 301
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
V KR +A H+ +ER RR+KIN++M+ LQ LVP K A ML+E+I Y+ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 267
Query: 215 VEFLS 219
V +S
Sbjct: 268 VSMMS 272
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
R+ R ATD S+ + RRE+IN ++R LQ+LVP K + ++ MLEE + YV LQ Q
Sbjct: 204 TRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTK-VDISTMLEEAVRYVKFLQLQ 262
Query: 215 VEFLS 219
++ LS
Sbjct: 263 IKLLS 267
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEII 205
VRAKRG AT SIAERVRR +I+ ++R LQ+LVP K A ML+E +
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAV 242
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 138 KVSSNEKEEGNPERIIHVRAKRGQAT-DSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
++++ + E +PE I + + + + D S+A R RRE+I++K+R LQ LVPG K M
Sbjct: 88 RIAAMQPVEIDPEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTK-MD 146
Query: 197 MAGMLEEIINYVHSLQNQVEFL 218
A ML+E ++YV L+ QV+ L
Sbjct: 147 TASMLDEAVHYVKFLKRQVQTL 168
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
+R +A H+ +ER RR++IN+KM+ LQ LVP K A ML+E+I Y+ LQ QV+
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 278
Query: 218 LSM 220
+S+
Sbjct: 279 MSV 281
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+
Sbjct: 157 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 215
Query: 217 FLSM 220
LS+
Sbjct: 216 MLSL 219
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+ +ER RR++IN+KMR LQ+L+P +K A ML+E I+Y+ LQ Q++
Sbjct: 731 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQM 789
Query: 218 LSM 220
+S+
Sbjct: 790 MSI 792
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 158 KRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
KR +A + H+ +ER RR++IN+KMR LQ+L+P +K A ML+E I Y+ LQ Q++
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQM 650
Query: 218 LSM 220
+S+
Sbjct: 651 MSI 653
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++E+ RR +IN+KM+ LQ+L+P K A ML+E I Y+ LQ QV+
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSK-TDKASMLDEAIEYLKLLQLQVQ 192
Query: 217 FLSMELAAA--CSSND 230
LS+ C+ ND
Sbjct: 193 GLSVRFLEIYRCTEND 208
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
AKR +A + H+ +ER RR++IN+KMR LQ+L+P +K A ML+E I Y+ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 77
Query: 217 FLSM 220
++
Sbjct: 78 VCAV 81
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 160 GQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
GQATD HSIAER+RRE+I +++R LQ+LVP +K A ML+EI++YV L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 220 M 220
M
Sbjct: 186 M 186
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 136 GKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
G + +E E E + ++R +A H+ +ER RR++IN+KM+ LQ LVP K
Sbjct: 222 GGSENQDEDRETKTETVRSHSSRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKT- 280
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSM 220
A ML+E+I Y+ LQ QV+ +S+
Sbjct: 281 DKASMLDEVIEYLKQLQAQVQAMSV 305
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
V KR +A H+ +ER RR+KIN++M+ LQ LVP +K A ML+E+I Y+ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQ 345
Query: 215 VE 216
V+
Sbjct: 346 VQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
V KR +A H+ +ER RR+KIN++M+ LQ LVP +K A ML+E+I Y+ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQ 345
Query: 215 VE 216
V+
Sbjct: 346 VQ 347
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
++R ++H++ E+ RR KIN++++ LQ +VPGC K A L++ I+Y+ SLQ+QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 230
Query: 217 FLS 219
+S
Sbjct: 231 AMS 233
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN++M+ LQ+L+P +K A ML+E I Y+ LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 217 FL 218
+
Sbjct: 63 VV 64
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
A + H+++E+ RR KIN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+ LSM
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSM 141
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 156 RAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
R G A+D + + RRE+IN++++ LQ LVP K + ++ MLEE + YV LQ Q+
Sbjct: 239 RCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTK-VDISTMLEEAVQYVKFLQVQI 297
Query: 216 EFLSME---LAAACSSNDLNI 233
+ LS + + A + N +NI
Sbjct: 298 KLLSSDDHWMYAPIAYNGMNI 318
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R+RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+ L
Sbjct: 43 DPQSVAARLRRERISEKIRILQRLVPGGRK-MDTASMLDEAIRYVKFLKRQIRSL 96
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 37/179 (20%)
Query: 51 PLAHQQPE---FLAGCSYNNSFSNFQTDSRIVV--------PRVR---TVRGNEDVLYES 96
P +H P F++G +S +RI + P+ R TVRG+ ++
Sbjct: 351 PDSHADPHSIGFISGTFRTDSHGTGIRKNRIFLSDEESDFLPKKRSKYTVRGD----FQM 406
Query: 97 SRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVR 156
R + +T + + C S S+ Y+ +R G+ R
Sbjct: 407 DRFDAVWGNTGLRGSSCPGNSVSQMMA-IYEFGPALNRNGRP-----------------R 448
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
+RG ATD S+ R RREKI +++R LQ L+P K + + ML+E ++YV L+ QV
Sbjct: 449 VQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKRQV 506
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+A +G ATD S+ R RRE+I+ ++R LQ+LVP K + ++ MLEE + YV LQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQ 298
Query: 215 VEFLSME---LAAACSSNDLNI 233
+ LS + + A + N L++
Sbjct: 299 NKLLSSDDLWMYAPIAYNGLDL 320
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 136 GKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
GKK +N K V KR +A H+ +ER RR+KIN++M+ LQ LVP K
Sbjct: 253 GKKKRANGKSS--------VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKS- 303
Query: 196 GMAGMLEEIINYVHSLQNQVEFL 218
A ML+E+I Y+ LQ Q++ +
Sbjct: 304 DKASMLDEVIEYLKQLQAQLQMI 326
>gi|297821098|ref|XP_002878432.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
gi|297324270|gb|EFH54691.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 149 PERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYV 208
P R KR + ++++ ER +R INKKMR LQDL+P HKD ML+E I Y+
Sbjct: 143 PARTRKALVKRKRNAEANNSPERKQRRDINKKMRTLQDLLPNSHKD-DNESMLDEAIIYM 201
Query: 209 HSLQNQVEFLSM 220
+L+ QV+ ++M
Sbjct: 202 KNLKLQVQMMTM 213
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+ FL
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRFL 180
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 47 SLATPLAHQQPEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQST 106
+L PLA Q C + F S+++ P V N+ V R+ T+
Sbjct: 52 ALFLPLAENQRCDKEQCQNTGAVRCFGHKSQVLAPITNEVTANKRVCLMDENRKSTDAKR 111
Query: 107 SISKTMCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEE-GNPERIIHVR---AKRG-- 160
+ S S D + ++ S+E + G E I ++ + RG
Sbjct: 112 PCTVPPWVSRKNSIAPADEINTTEPVNKSCSWCCSSEDDSAGACEEPIVLKQSTSSRGPS 171
Query: 161 -QATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
+ DS S+ + RRE+IN+K+R LQ L+P K + M+ MLEE + YV LQ Q++ L
Sbjct: 172 RSSKDSQSLYAKRRRERINEKLRTLQQLIPNGTK-VDMSTMLEEAVQYVKFLQLQIKLL- 229
Query: 220 MELAAAC 226
LA C
Sbjct: 230 --LACKC 234
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE------- 216
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+
Sbjct: 34 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRQLQSNHH 92
Query: 217 FLSMELAAACSSNDLNIETESSRKTQGTNSHEALE 251
L ++ A S+ D + +S K G+ S ++E
Sbjct: 93 PLPTDVTACLSTPDWAV---TSTKLLGSTSSSSME 124
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV 215
+TD S+A R RR +I+ + + LQ LVPG K M MLEE INYV L+NQ+
Sbjct: 38 STDPQSVAARERRHRISDRFKILQSLVPGGTK-MDTVSMLEEAINYVKFLKNQI 90
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 160 GQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS 219
G A D SIA + RRE+I+++++ LQDLVP K + + MLE+ I+YV LQ QV+ L+
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 290
Query: 220 ME 221
+
Sbjct: 291 TD 292
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+ LSM
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
A + H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+ L+M
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 245
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
+KR +A + H+++ER RR++IN++M+ LQ+L+P +K A ML+E I Y+ LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 217 FL 218
+
Sbjct: 63 VV 64
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 166 HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
H+ +ER RR++IN+K++ LQ+L+P C K ML+E I+Y+ SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 71
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
+TD ++A R RRE+I++K+R LQ LVPG K M A ML+E NY+ L++QV+ L
Sbjct: 339 STDPQTVAARHRRERISEKIRVLQKLVPGGSK-MDTASMLDEAANYLKFLRSQVKAL 394
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+RA+RG AT S+AERVRR KI++ ++ L DLVP K A ML + Y+ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 215 VEFLSMEL 222
+E + EL
Sbjct: 617 IEQMKEEL 624
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSME 221
D S+A +VRREKI +K++ LQDLVP K + + MLE+ I YV LQ QV+ L+ +
Sbjct: 237 DPQSVAAKVRREKIAEKLKVLQDLVPNGTK-VDLVTMLEKAITYVKFLQLQVKVLAAD 293
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 153 IHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHK 193
+ +RAKRG AT SIAERVRR KI+++MR LQDLVP K
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDK 370
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 160 GQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
G ATD S+ R RREKIN++++ LQ+LVP K + + ML+E I+YV LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQVELL 58
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 166 HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
H+ +ER RR++IN+K++ LQ+L+P C K ML+E I+Y+ SLQ Q++ L M
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQIQLQMLVM 75
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 170 ERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
+R+RRE+I ++M+ LQ+LVP +K A ML+EII+YV LQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 155 VRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQ 214
+ KR +A H+ +ER RR++IN+KM+ LQ LVP K A ML+E+I+Y+ LQ Q
Sbjct: 269 ISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQ 327
Query: 215 VEF 217
V+
Sbjct: 328 VQV 330
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 14/77 (18%)
Query: 148 NPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINY 207
P RI RA+R RR KIN++++ LQ LVPGC K A L++ I+Y
Sbjct: 213 GPVRIGPCRAQR-------------RRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHY 258
Query: 208 VHSLQNQVEFLSMELAA 224
+ SLQ+QV+ +S+ LA+
Sbjct: 259 MKSLQHQVQAMSVGLAS 275
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
++ S+A R+RRE+++++MR LQ LVPG + + A MLEE I YV L+ V+ S+E
Sbjct: 122 SEPQSVAARLRRERVSQRMRALQRLVPGGAR-LDTASMLEEAIRYVKFLKGHVQ--SLER 178
Query: 223 AAAC 226
AAA
Sbjct: 179 AAAA 182
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I+YV L+ Q+ L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKRQIRLL 187
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMEL 222
++ S+A R+RRE+++++MR LQ LVPG + + A MLEE I YV L+ V+ S+E
Sbjct: 123 SEPQSVAARLRRERVSQRMRALQRLVPGGAR-LDTASMLEEAIRYVKFLKGHVQ--SLER 179
Query: 223 AAAC 226
AAA
Sbjct: 180 AAAA 183
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+ L
Sbjct: 146 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 199
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQV-------E 216
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+
Sbjct: 97 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRQLQSNHH 155
Query: 217 FLSMELAAACSSNDLNIETESSRKTQGTNSHEALE 251
L ++ A S+ D + +S K G+ S ++E
Sbjct: 156 PLPTDVTACLSTPDWAV---TSTKLLGSTSSSSME 187
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 173 RREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
RR++IN+KMR LQ+L+P C+K + A ML+E I Y+ +LQ QV+ +SM
Sbjct: 12 RRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 58
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
++D ++A R RRE+I+ K+R LQ LVPG K M A ML+E I+YV L++QV+ + M
Sbjct: 290 SSDPQTVAARHRRERISTKIRILQRLVPGGTK-MDTASMLDEAIHYVKYLKSQVQAMEM 347
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
+TD ++A R RRE+I++K+R LQ LVPG K M A ML+E NY+ L+ QV+ L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKAL 331
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
+TD ++A R RRE+I++K+R LQ LVPG K M A ML+E NY+ L+ QV+ L
Sbjct: 278 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKAL 333
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+ L
Sbjct: 138 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 191
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 157 AKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVE 216
++R ++H++ E+ RR KIN++ + LQ +VPGC K A L++ I+Y+ SLQ+QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 233
Query: 217 FLS 219
+S
Sbjct: 234 AMS 236
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 137 KKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMG 196
+ VS ++ G R +VR ++D ++A R RRE+I++++R LQ LVPG K M
Sbjct: 333 RPVSLGSEDAGERPRRRNVRI----SSDPQTVAARQRRERISERLRVLQKLVPGGAK-MD 387
Query: 197 MAGMLEEIINYVHSLQNQVEFL 218
A ML+E NY+ L++QV L
Sbjct: 388 TASMLDEAANYLRFLKSQVREL 409
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q++ L
Sbjct: 123 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIKLL 176
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
+TD ++A R RRE+I++K+R LQ LVPG K M A ML+E NY+ L+ QV+ L
Sbjct: 305 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKAL 360
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 166 HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+ LSM
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS--- 219
TD S+ R RRE+IN++++ LQ+L+P K + ++ MLEE ++YV LQ Q++ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 220 MELAAACSSNDLNI 233
M + A + N +N+
Sbjct: 299 MWMFAPIAYNGVNV 312
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
++D ++A R+RRE++++++R LQ LVPG K M A ML+E +Y+ L++Q+E L
Sbjct: 232 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 287
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS--- 219
TD S+ R RRE+IN++++ LQ+L+P K + ++ MLEE ++YV LQ Q++ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 220 MELAAACSSNDLNI 233
M + A + N +N+
Sbjct: 299 MWMFAPIAYNGVNV 312
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLS--- 219
TD S+ R RRE+IN++++ LQ+L+P K + ++ MLEE ++YV LQ Q++ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 220 MELAAACSSNDLNI 233
M + A + N +N+
Sbjct: 299 MWMFAPIAYNGVNV 312
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+ L
Sbjct: 133 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 186
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
++D ++A R RRE+I+ K+R LQ LVPG K M A ML+E I+YV L++QV+ + M
Sbjct: 291 SSDPQTVAARHRRERISTKIRILQRLVPGGTK-MDTASMLDEAIHYVKYLKSQVQAMEM 348
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELA 223
D S+A R RRE+I+++++ LQ LVPG K M A ML+E I+YV L+ QV+ L
Sbjct: 139 DPQSVAARHRRERISERIKILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQ----TLE 193
Query: 224 AACSSNDLNI 233
A +S LN+
Sbjct: 194 QAGASRPLNV 203
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 148 NPERIIHVRAKRGQ------ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGML 201
PE I A++ + ++D ++A R+RRE++++++R LQ LVPG K M A ML
Sbjct: 273 GPEVIAAAAAEKPRRKNVRISSDPQTVAARLRRERVSERLRVLQKLVPGGSK-MDTASML 331
Query: 202 EEIINYVHSLQNQVEFL 218
+E +Y+ L++QV+ L
Sbjct: 332 DEAASYLKFLKSQVQAL 348
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I YV L+ Q+ L
Sbjct: 107 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKKQIRLL 160
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 166 HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+ LSM
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSM 198
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 11/85 (12%)
Query: 136 GKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDM 195
GK+ +S E+E+ + ++ +H ++ + RR++IN+K++ LQ+L+P C K
Sbjct: 124 GKEAASQEEEQ----------TPKLRSVIAHLVSRKRRRDRINEKLKALQELLPNCTKT- 172
Query: 196 GMAGMLEEIINYVHSLQNQVEFLSM 220
ML+E I+Y+ SLQ Q++ L M
Sbjct: 173 DKVSMLDEAIDYLKSLQLQLQMLVM 197
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 166 HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
H+++E+ RR +IN+KM+ LQ+L+P +K A ML+E I Y+ LQ QV+ LS+
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSL 169
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
+TD ++A R RRE+I++K+R LQ LVPG K M A ML+E NY L+ QV+ L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYFKFLRAQVKAL 331
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 148 NPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINY 207
NP R + + ++D ++A R RRE+I+ ++R LQ LVPG K M A ML+E +Y
Sbjct: 311 NPARNVRI------SSDPQTVAARQRRERISDRLRVLQKLVPGGAK-MDTASMLDEAASY 363
Query: 208 VHSLQNQV---EFLSMELAAACSSND 230
+ L++QV + L A SSND
Sbjct: 364 LRFLKSQVRDLQTLDRRNYGAASSND 389
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
++D ++A R+RRE++++++R LQ LVPG K M A ML+E +Y+ L++Q+E L
Sbjct: 276 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 331
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 163 TDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
+D ++A R RRE+I++++R LQ LVPG K M A ML+E +Y+ LQ+QV L
Sbjct: 322 SDPQTVAARQRRERISERLRVLQKLVPGGAK-MDTASMLDEAASYLRFLQSQVREL 376
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 162 ATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFL 218
++D ++A R+RRE++++++R LQ LVPG K M A ML+E +Y+ L++Q+E L
Sbjct: 302 SSDPQTVAARLRRERVSERLRVLQRLVPGGSK-MDTATMLDEAASYLKFLKSQLEAL 357
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 161 QATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSM 220
+A + H+++E+ RR +IN+KM+ LQ L+P +K A ML+E I Y+ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 164 DSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEF 217
D S+A R RRE+I++K+R LQ LVPG K M A ML+E I+YV L+ Q E+
Sbjct: 107 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIHYVXFLKTQTEW 159
>gi|357488103|ref|XP_003614339.1| Transcription factor BIM2 [Medicago truncatula]
gi|355515674|gb|AES97297.1| Transcription factor BIM2 [Medicago truncatula]
Length = 335
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 158 KRGQATDS-------HSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHS 210
K G+ATD HS+ E+ RR KIN++ + L+DL+P C + A L E+I YV
Sbjct: 34 KDGKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQY 93
Query: 211 LQNQVE 216
LQ +V+
Sbjct: 94 LQERVQ 99
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.124 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,897,615,928
Number of Sequences: 23463169
Number of extensions: 146052241
Number of successful extensions: 392916
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 1551
Number of HSP's that attempted gapping in prelim test: 390504
Number of HSP's gapped (non-prelim): 3065
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)