Query 024115
Match_columns 272
No_of_seqs 212 out of 1810
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 09:04:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024115.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024115hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05057 DUF676: Putative seri 100.0 1.4E-27 3E-32 207.9 14.0 196 7-218 17-214 (217)
2 KOG4372 Predicted alpha/beta h 99.8 3.6E-20 7.8E-25 170.6 0.9 244 8-260 92-338 (405)
3 PLN02824 hydrolase, alpha/beta 99.6 5.1E-16 1.1E-20 139.7 9.6 207 17-256 55-290 (294)
4 PLN02965 Probable pheophorbida 99.6 5.9E-17 1.3E-21 143.1 2.6 62 194-257 188-250 (255)
5 PRK03592 haloalkane dehalogena 99.6 8.4E-16 1.8E-20 138.3 7.8 204 13-257 50-286 (295)
6 TIGR02240 PHA_depoly_arom poly 99.6 6E-16 1.3E-20 138.1 5.9 198 17-256 51-262 (276)
7 TIGR03343 biphenyl_bphD 2-hydr 99.6 9.4E-16 2E-20 136.2 6.9 204 13-255 56-278 (282)
8 PRK00870 haloalkane dehalogena 99.6 3.1E-15 6.7E-20 135.3 7.2 64 191-256 231-297 (302)
9 PLN03087 BODYGUARD 1 domain co 99.6 7.9E-15 1.7E-19 141.2 9.4 61 195-257 414-476 (481)
10 PLN02679 hydrolase, alpha/beta 99.5 1.9E-14 4.2E-19 134.1 9.8 67 190-256 283-353 (360)
11 PRK07581 hypothetical protein; 99.5 1.4E-14 3.1E-19 133.2 8.3 62 190-253 266-329 (339)
12 PRK10349 carboxylesterase BioH 99.5 1.9E-14 4.1E-19 126.7 8.7 64 190-255 187-251 (256)
13 PRK06489 hypothetical protein; 99.5 2.3E-14 5.1E-19 133.3 7.5 66 190-256 283-353 (360)
14 PRK03204 haloalkane dehalogena 99.5 2.9E-14 6.2E-19 128.6 7.3 57 199-255 227-283 (286)
15 PLN02298 hydrolase, alpha/beta 99.5 5E-14 1.1E-18 129.0 8.9 61 191-251 243-304 (330)
16 PLN02385 hydrolase; alpha/beta 99.5 5.9E-14 1.3E-18 129.9 8.9 59 190-248 270-329 (349)
17 PHA02857 monoglyceride lipase; 99.5 3.3E-13 7.2E-18 120.0 12.4 57 190-247 200-257 (276)
18 PF12697 Abhydrolase_6: Alpha/ 99.5 6.1E-15 1.3E-19 123.8 1.1 192 16-251 23-227 (228)
19 TIGR03611 RutD pyrimidine util 99.5 7.1E-14 1.5E-18 120.7 6.9 65 190-256 189-254 (257)
20 TIGR01738 bioH putative pimelo 99.5 1.4E-13 3.1E-18 117.3 7.8 64 190-255 179-243 (245)
21 TIGR03056 bchO_mg_che_rel puta 99.5 1.7E-13 3.6E-18 120.7 8.4 63 191-255 212-275 (278)
22 PLN02578 hydrolase 99.5 3.7E-13 8.1E-18 125.0 10.7 64 190-256 287-351 (354)
23 PRK11126 2-succinyl-6-hydroxy- 99.4 1.7E-13 3.7E-18 119.0 7.5 194 17-255 27-237 (242)
24 PRK08775 homoserine O-acetyltr 99.4 1.4E-13 3E-18 127.3 6.8 61 194-256 272-335 (343)
25 TIGR02427 protocat_pcaD 3-oxoa 99.4 1.3E-13 2.8E-18 117.8 6.2 64 190-255 184-248 (251)
26 TIGR01392 homoserO_Ac_trn homo 99.4 2.8E-13 6.1E-18 125.6 8.8 64 190-255 279-348 (351)
27 TIGR01250 pro_imino_pep_2 prol 99.4 4.8E-13 1E-17 117.1 6.8 63 190-255 222-285 (288)
28 PRK10673 acyl-CoA esterase; Pr 99.4 3.5E-13 7.6E-18 117.8 5.8 60 194-255 190-250 (255)
29 PLN02211 methyl indole-3-aceta 99.4 1.1E-13 2.5E-18 124.2 2.8 59 195-256 206-266 (273)
30 TIGR03695 menH_SHCHC 2-succiny 99.4 9.5E-13 2.1E-17 112.0 7.9 65 190-256 185-249 (251)
31 PRK10749 lysophospholipase L2; 99.4 2.2E-12 4.8E-17 118.6 10.6 57 191-247 251-313 (330)
32 PLN02894 hydrolase, alpha/beta 99.4 2.7E-12 5.8E-17 121.5 10.8 68 190-258 316-383 (402)
33 KOG4178 Soluble epoxide hydrol 99.3 2E-12 4.3E-17 117.1 5.8 207 10-256 64-316 (322)
34 PF00561 Abhydrolase_1: alpha/ 99.3 2.6E-13 5.6E-18 115.7 -0.2 64 189-253 165-228 (230)
35 PRK00175 metX homoserine O-ace 99.3 5E-12 1.1E-16 118.7 8.1 65 190-256 300-370 (379)
36 PRK14875 acetoin dehydrogenase 99.3 8.9E-12 1.9E-16 115.2 9.2 62 190-255 305-366 (371)
37 PLN03084 alpha/beta hydrolase 99.3 8.6E-12 1.9E-16 117.4 7.9 195 17-256 153-380 (383)
38 KOG1454 Predicted hydrolase/ac 99.2 6E-12 1.3E-16 116.0 5.3 62 191-254 255-318 (326)
39 PRK06765 homoserine O-acetyltr 99.2 2.1E-11 4.5E-16 115.0 7.2 65 190-256 314-384 (389)
40 PLN02511 hydrolase 99.2 1.6E-11 3.5E-16 115.7 6.1 58 192-249 291-348 (388)
41 PLN02980 2-oxoglutarate decarb 99.2 2E-11 4.3E-16 132.7 6.3 205 17-256 1397-1635(1655)
42 TIGR01249 pro_imino_pep_1 prol 99.2 2.8E-11 6.2E-16 109.9 5.9 71 15-95 51-121 (306)
43 PRK10985 putative hydrolase; P 99.1 2.7E-10 5.9E-15 104.6 10.4 53 191-245 247-300 (324)
44 PLN02652 hydrolase; alpha/beta 99.1 2.1E-10 4.6E-15 108.4 9.5 66 191-256 316-383 (395)
45 TIGR01838 PHA_synth_I poly(R)- 99.1 4.6E-10 1E-14 109.5 11.0 59 190-250 406-465 (532)
46 PRK05855 short chain dehydroge 99.0 2.3E-10 4.9E-15 111.7 5.7 58 195-255 229-287 (582)
47 TIGR01607 PST-A Plasmodium sub 99.0 1.4E-09 3E-14 100.4 10.6 61 194-254 263-327 (332)
48 PRK05077 frsA fermentation/res 99.0 1.4E-09 3.1E-14 103.4 9.6 187 12-255 217-407 (414)
49 COG2267 PldB Lysophospholipase 98.9 7E-09 1.5E-13 94.6 11.2 53 195-247 224-278 (298)
50 KOG4409 Predicted hydrolase/ac 98.9 1.9E-09 4E-14 98.5 5.9 67 22-96 121-187 (365)
51 PF07819 PGAP1: PGAP1-like pro 98.9 1.2E-08 2.5E-13 89.5 9.8 84 29-135 40-129 (225)
52 TIGR01836 PHA_synth_III_C poly 98.9 1E-08 2.2E-13 95.1 9.6 57 194-253 281-343 (350)
53 COG1647 Esterase/lipase [Gener 98.9 3.7E-09 8.1E-14 91.0 5.7 186 12-245 37-228 (243)
54 TIGR03100 hydr1_PEP hydrolase, 98.8 1.3E-08 2.7E-13 91.4 9.2 65 190-254 198-269 (274)
55 PRK13604 luxD acyl transferase 98.7 5.5E-08 1.2E-12 88.7 9.6 61 193-255 196-257 (307)
56 KOG2382 Predicted alpha/beta h 98.7 7E-09 1.5E-13 94.1 3.6 57 196-254 250-307 (315)
57 KOG1455 Lysophospholipase [Lip 98.7 2.6E-08 5.7E-13 89.5 7.0 69 189-257 236-306 (313)
58 PRK11071 esterase YqiA; Provis 98.7 6.5E-08 1.4E-12 82.4 8.0 39 51-91 45-83 (190)
59 PRK10566 esterase; Provisional 98.6 2.8E-08 6E-13 87.0 4.8 51 192-242 178-234 (249)
60 PLN02633 palmitoyl protein thi 98.6 1.1E-06 2.5E-11 79.6 13.4 128 68-222 94-235 (314)
61 PLN02733 phosphatidylcholine-s 98.6 1.7E-07 3.6E-12 89.8 7.9 67 46-135 141-207 (440)
62 PRK07868 acyl-CoA synthetase; 98.5 5.2E-07 1.1E-11 94.7 11.5 48 194-243 292-341 (994)
63 PF06028 DUF915: Alpha/beta hy 98.5 9.3E-07 2E-11 78.9 10.1 70 45-136 81-150 (255)
64 COG0596 MhpC Predicted hydrola 98.4 3E-07 6.4E-12 77.3 5.8 63 192-255 214-277 (282)
65 KOG2984 Predicted hydrolase [G 98.4 7.3E-08 1.6E-12 82.1 2.0 169 45-256 93-272 (277)
66 PF00326 Peptidase_S9: Prolyl 98.4 2E-07 4.3E-12 80.1 4.6 44 198-242 143-190 (213)
67 PF02089 Palm_thioest: Palmito 98.4 2.9E-06 6.4E-11 76.2 12.0 184 9-222 23-219 (279)
68 PLN02606 palmitoyl-protein thi 98.4 3.8E-06 8.2E-11 76.2 12.5 125 68-222 95-234 (306)
69 PLN02872 triacylglycerol lipas 98.3 1.3E-06 2.8E-11 82.8 6.5 63 194-258 318-387 (395)
70 PF02450 LCAT: Lecithin:choles 98.3 1.8E-06 3.9E-11 81.6 6.7 65 49-135 102-166 (389)
71 COG1075 LipA Predicted acetylt 98.2 2.9E-06 6.3E-11 78.7 6.3 67 45-136 105-171 (336)
72 PF01674 Lipase_2: Lipase (cla 98.2 3.6E-06 7.7E-11 73.5 6.2 154 51-248 60-215 (219)
73 PF12695 Abhydrolase_5: Alpha/ 98.1 5.3E-06 1.1E-10 65.9 6.3 42 197-240 102-145 (145)
74 KOG2541 Palmitoyl protein thio 98.1 3.4E-05 7.4E-10 68.5 10.8 141 51-221 74-230 (296)
75 PLN02442 S-formylglutathione h 98.1 1.9E-05 4.2E-10 71.3 9.4 48 194-242 212-264 (283)
76 PRK11460 putative hydrolase; P 98.0 1.1E-05 2.3E-10 70.9 6.2 51 199-249 148-201 (232)
77 TIGR02821 fghA_ester_D S-formy 98.0 4.4E-05 9.4E-10 68.5 9.7 43 51-94 119-163 (275)
78 COG3208 GrsT Predicted thioest 97.9 1.1E-05 2.3E-10 70.9 4.8 59 196-256 173-232 (244)
79 KOG4667 Predicted esterase [Li 97.9 2.5E-05 5.4E-10 67.5 6.8 51 190-242 188-241 (269)
80 PF02230 Abhydrolase_2: Phosph 97.9 1.2E-05 2.7E-10 69.4 4.5 47 199-247 155-206 (216)
81 KOG3724 Negative regulator of 97.9 0.00017 3.7E-09 72.2 12.2 84 28-136 132-227 (973)
82 TIGR03101 hydr2_PEP hydrolase, 97.8 5.6E-05 1.2E-09 67.9 7.7 70 12-93 51-123 (266)
83 COG2021 MET2 Homoserine acetyl 97.8 0.00018 3.9E-09 66.7 9.6 63 189-253 296-361 (368)
84 cd00741 Lipase Lipase. Lipase 97.7 0.00014 3E-09 59.4 7.9 66 46-133 3-71 (153)
85 PF08840 BAAT_C: BAAT / Acyl-C 97.7 4.9E-05 1.1E-09 66.0 4.3 50 194-244 110-166 (213)
86 TIGR01839 PHA_synth_II poly(R) 97.6 0.00072 1.6E-08 66.4 12.3 54 193-248 435-489 (560)
87 TIGR03230 lipo_lipase lipoprot 97.6 0.00011 2.5E-09 70.3 6.5 73 17-96 73-146 (442)
88 PF09752 DUF2048: Uncharacteri 97.6 0.00027 5.8E-09 65.3 8.6 64 190-256 275-345 (348)
89 TIGR01840 esterase_phb esteras 97.6 0.00038 8.3E-09 59.8 9.1 27 67-94 94-120 (212)
90 COG0429 Predicted hydrolase of 97.5 0.00035 7.6E-09 64.0 8.0 54 192-245 267-320 (345)
91 PLN00021 chlorophyllase 97.5 0.00032 7E-09 64.5 7.8 48 198-246 188-246 (313)
92 PF01764 Lipase_3: Lipase (cla 97.5 0.00047 1E-08 54.9 7.4 63 49-132 46-108 (140)
93 KOG2564 Predicted acetyltransf 97.4 0.00011 2.5E-09 65.7 3.4 55 19-82 104-160 (343)
94 cd00707 Pancreat_lipase_like P 97.3 0.00046 1E-08 62.2 5.9 45 49-95 92-138 (275)
95 KOG2369 Lecithin:cholesterol a 97.3 0.00046 9.9E-09 65.8 5.9 101 12-134 125-230 (473)
96 KOG1838 Alpha/beta hydrolase [ 97.2 0.0019 4.1E-08 61.0 9.5 56 191-246 314-369 (409)
97 KOG2029 Uncharacterized conser 97.2 0.0012 2.5E-08 64.6 7.5 56 67-137 525-580 (697)
98 COG4814 Uncharacterized protei 97.2 0.0019 4.1E-08 57.2 8.2 54 55-130 123-177 (288)
99 COG3545 Predicted esterase of 97.2 0.0019 4.1E-08 54.2 7.7 41 200-243 118-159 (181)
100 PF06821 Ser_hydrolase: Serine 97.1 0.00025 5.5E-09 59.5 2.0 41 201-244 116-157 (171)
101 COG3243 PhaC Poly(3-hydroxyalk 97.1 0.00089 1.9E-08 63.2 5.7 55 191-246 322-376 (445)
102 cd00519 Lipase_3 Lipase (class 97.1 0.0015 3.3E-08 56.8 6.9 70 42-133 99-171 (229)
103 PLN02517 phosphatidylcholine-s 97.0 0.00068 1.5E-08 66.6 4.6 73 51-134 193-268 (642)
104 KOG1552 Predicted alpha/beta h 97.0 0.0017 3.6E-08 57.6 6.5 48 193-242 186-235 (258)
105 PF05448 AXE1: Acetyl xylan es 97.0 0.0011 2.5E-08 61.1 5.1 55 189-244 252-307 (320)
106 COG1506 DAP2 Dipeptidyl aminop 96.9 0.00079 1.7E-08 67.5 3.4 49 195-243 547-598 (620)
107 TIGR03502 lipase_Pla1_cef extr 96.8 0.0012 2.7E-08 67.3 4.6 37 51-88 523-575 (792)
108 PF06500 DUF1100: Alpha/beta h 96.8 0.0018 4E-08 61.3 5.1 43 51-94 242-286 (411)
109 PF01738 DLH: Dienelactone hyd 96.8 0.0054 1.2E-07 52.7 7.6 57 195-251 141-200 (218)
110 PF05990 DUF900: Alpha/beta hy 96.7 0.0029 6.3E-08 55.7 5.5 43 49-92 75-117 (233)
111 PF00975 Thioesterase: Thioest 96.7 0.0035 7.6E-08 53.8 5.8 43 41-88 43-85 (229)
112 PF05728 UPF0227: Uncharacteri 96.6 0.0043 9.3E-08 52.9 5.5 38 53-92 45-82 (187)
113 PF00756 Esterase: Putative es 96.5 0.0098 2.1E-07 51.9 7.5 49 45-94 90-140 (251)
114 PF06342 DUF1057: Alpha/beta h 96.5 0.051 1.1E-06 49.1 11.9 73 9-90 50-125 (297)
115 PLN02571 triacylglycerol lipas 96.4 0.0097 2.1E-07 56.5 7.1 39 50-88 207-246 (413)
116 PLN02408 phospholipase A1 96.4 0.0081 1.8E-07 56.2 6.4 62 51-133 182-244 (365)
117 PLN02324 triacylglycerol lipas 96.2 0.013 2.8E-07 55.6 6.9 40 49-88 195-235 (415)
118 PLN02454 triacylglycerol lipas 96.2 0.013 2.9E-07 55.5 6.9 40 49-88 208-248 (414)
119 KOG2205 Uncharacterized conser 96.2 0.00077 1.7E-08 62.6 -1.5 89 119-223 256-344 (424)
120 PF05277 DUF726: Protein of un 96.2 0.012 2.6E-07 54.8 6.3 62 50-132 201-263 (345)
121 PLN00413 triacylglycerol lipas 96.1 0.016 3.4E-07 55.8 7.0 36 52-88 269-304 (479)
122 PF08538 DUF1749: Protein of u 96.0 0.27 5.7E-06 45.0 14.2 57 189-245 222-286 (303)
123 PRK10162 acetyl esterase; Prov 95.9 0.038 8.3E-07 50.6 8.6 43 199-243 248-293 (318)
124 PLN02802 triacylglycerol lipas 95.9 0.017 3.7E-07 56.0 6.3 62 51-133 312-374 (509)
125 COG2945 Predicted hydrolase of 95.9 0.017 3.7E-07 49.3 5.6 47 197-245 147-193 (210)
126 PLN02310 triacylglycerol lipas 95.8 0.021 4.6E-07 54.1 6.4 61 51-133 189-252 (405)
127 COG4188 Predicted dienelactone 95.8 0.01 2.2E-07 55.3 4.1 57 193-249 245-303 (365)
128 PRK04940 hypothetical protein; 95.8 0.021 4.6E-07 48.3 5.6 37 201-241 126-163 (180)
129 PF08386 Abhydrolase_4: TAP-li 95.8 0.0036 7.8E-08 48.0 0.8 43 199-243 34-77 (103)
130 PLN02162 triacylglycerol lipas 95.6 0.034 7.3E-07 53.5 6.8 35 52-87 263-297 (475)
131 PF00151 Lipase: Lipase; Inte 95.6 0.027 5.8E-07 52.2 6.1 44 46-89 127-171 (331)
132 PLN02753 triacylglycerol lipas 95.4 0.04 8.6E-07 53.7 6.8 37 50-86 290-330 (531)
133 PLN02934 triacylglycerol lipas 95.4 0.038 8.2E-07 53.7 6.7 35 51-86 305-339 (515)
134 PLN03037 lipase class 3 family 95.4 0.039 8.4E-07 53.7 6.5 62 51-133 298-362 (525)
135 COG4757 Predicted alpha/beta h 95.2 0.021 4.5E-07 50.2 3.6 64 190-255 207-278 (281)
136 COG3458 Acetyl esterase (deace 95.2 0.035 7.7E-07 49.8 5.1 49 190-239 250-299 (321)
137 PLN02719 triacylglycerol lipas 95.2 0.053 1.1E-06 52.7 6.7 36 51-86 277-316 (518)
138 PLN02761 lipase class 3 family 95.2 0.054 1.2E-06 52.8 6.7 36 51-86 272-312 (527)
139 TIGR00976 /NonD putative hydro 95.1 0.019 4.2E-07 56.6 3.8 73 11-95 47-123 (550)
140 PRK10439 enterobactin/ferric e 95.1 0.079 1.7E-06 50.6 7.8 48 46-94 262-313 (411)
141 PF06259 Abhydrolase_8: Alpha/ 95.1 0.13 2.8E-06 43.5 8.1 83 26-134 66-149 (177)
142 PF11187 DUF2974: Protein of u 95.0 0.066 1.4E-06 46.9 6.3 33 55-89 73-105 (224)
143 PRK05371 x-prolyl-dipeptidyl a 95.0 0.13 2.7E-06 53.1 9.2 29 190-218 446-474 (767)
144 COG3319 Thioesterase domains o 94.8 0.048 1E-06 48.8 5.1 47 37-88 38-84 (257)
145 COG0412 Dienelactone hydrolase 94.8 0.076 1.7E-06 46.8 6.3 49 197-245 156-207 (236)
146 PF03096 Ndr: Ndr family; Int 94.7 0.017 3.8E-07 52.1 1.9 46 46-95 79-125 (283)
147 COG2819 Predicted hydrolase of 94.6 0.073 1.6E-06 47.6 5.7 54 41-95 108-163 (264)
148 KOG2931 Differentiation-relate 94.3 0.24 5.2E-06 45.0 8.3 46 46-95 102-148 (326)
149 PLN02847 triacylglycerol lipas 94.3 0.1 2.2E-06 51.6 6.3 47 41-88 221-270 (633)
150 PRK10115 protease 2; Provision 94.2 0.038 8.2E-07 56.2 3.2 47 194-241 600-654 (686)
151 COG3571 Predicted hydrolase of 94.1 0.14 3.1E-06 42.7 6.0 39 53-92 75-113 (213)
152 smart00824 PKS_TE Thioesterase 93.9 0.13 2.7E-06 42.6 5.5 36 53-89 49-84 (212)
153 PF10230 DUF2305: Uncharacteri 93.9 0.13 2.9E-06 46.0 6.0 38 53-91 68-106 (266)
154 PF01083 Cutinase: Cutinase; 93.9 0.27 5.8E-06 41.5 7.5 69 45-134 59-127 (179)
155 PF10503 Esterase_phd: Esteras 93.8 0.52 1.1E-05 41.2 9.3 41 52-94 80-122 (220)
156 COG4782 Uncharacterized protei 93.8 0.13 2.9E-06 47.9 5.7 40 51-91 175-214 (377)
157 PF07224 Chlorophyllase: Chlor 93.3 0.11 2.3E-06 46.6 4.1 42 49-91 95-142 (307)
158 COG3150 Predicted esterase [Ge 93.0 0.19 4.2E-06 42.0 5.0 40 51-92 43-82 (191)
159 KOG4569 Predicted lipase [Lipi 92.9 0.29 6.3E-06 45.5 6.6 62 51-133 155-216 (336)
160 KOG1551 Uncharacterized conser 92.8 0.17 3.7E-06 45.4 4.6 59 195-255 297-361 (371)
161 KOG4391 Predicted alpha/beta h 92.6 0.074 1.6E-06 46.4 2.1 47 195-241 217-264 (300)
162 COG0400 Predicted esterase [Ge 92.6 0.31 6.8E-06 42.2 6.0 48 45-94 75-124 (207)
163 PRK10252 entF enterobactin syn 92.5 0.19 4.1E-06 54.2 5.4 39 51-90 1116-1154(1296)
164 PF12715 Abhydrolase_7: Abhydr 92.3 0.17 3.7E-06 47.7 4.2 25 67-92 225-249 (390)
165 PF05705 DUF829: Eukaryotic pr 92.1 1.2 2.6E-05 38.8 9.2 55 197-252 176-235 (240)
166 KOG2385 Uncharacterized conser 91.4 0.37 7.9E-06 46.9 5.4 41 46-89 428-468 (633)
167 KOG4627 Kynurenine formamidase 91.1 0.46 1E-05 41.2 5.2 49 194-244 202-251 (270)
168 PF11288 DUF3089: Protein of u 91.0 0.55 1.2E-05 40.6 5.7 32 57-88 84-115 (207)
169 COG0627 Predicted esterase [Ge 90.6 0.33 7.1E-06 44.8 4.2 44 51-95 131-178 (316)
170 KOG4372 Predicted alpha/beta h 89.6 0.08 1.7E-06 49.9 -0.7 91 117-221 182-281 (405)
171 COG2382 Fes Enterochelin ester 89.2 0.73 1.6E-05 42.0 5.2 51 43-94 148-202 (299)
172 KOG4840 Predicted hydrolases o 89.1 0.77 1.7E-05 40.3 5.0 66 15-87 54-126 (299)
173 PF08237 PE-PPE: PE-PPE domain 88.9 1.6 3.5E-05 38.2 7.0 45 45-92 28-72 (225)
174 TIGR01849 PHB_depoly_PhaZ poly 88.8 1.1 2.3E-05 42.9 6.2 50 194-243 332-386 (406)
175 PTZ00472 serine carboxypeptida 88.6 1 2.2E-05 43.7 6.1 58 199-256 364-455 (462)
176 PF07859 Abhydrolase_3: alpha/ 84.9 1.6 3.4E-05 36.7 4.7 41 200-242 167-210 (211)
177 KOG4540 Putative lipase essent 84.2 2 4.4E-05 39.1 5.1 28 64-92 272-299 (425)
178 COG5153 CVT17 Putative lipase 84.2 2 4.4E-05 39.1 5.1 28 64-92 272-299 (425)
179 PF06057 VirJ: Bacterial virul 83.7 2.8 6E-05 35.9 5.5 38 51-89 52-89 (192)
180 PF05677 DUF818: Chlamydia CHL 83.3 5.4 0.00012 37.2 7.6 23 66-88 213-235 (365)
181 KOG3101 Esterase D [General fu 82.4 0.88 1.9E-05 39.7 2.0 51 42-93 112-165 (283)
182 PF12740 Chlorophyllase2: Chlo 81.4 1.8 3.8E-05 38.8 3.7 22 66-88 89-110 (259)
183 KOG2624 Triglyceride lipase-ch 81.1 1.8 3.9E-05 41.3 3.8 63 194-258 327-396 (403)
184 KOG2551 Phospholipase/carboxyh 78.4 1.3 2.8E-05 38.7 1.8 49 195-246 159-208 (230)
185 COG4099 Predicted peptidase [G 75.9 7.6 0.00017 35.7 6.0 43 51-94 250-294 (387)
186 KOG2100 Dipeptidyl aminopeptid 74.3 4.2 9.1E-05 42.0 4.5 49 194-243 676-729 (755)
187 KOG2112 Lysophospholipase [Lip 73.4 8.3 0.00018 33.3 5.4 42 51-93 72-117 (206)
188 COG0657 Aes Esterase/lipase [L 72.9 7.4 0.00016 35.1 5.3 49 195-246 242-293 (312)
189 PF03403 PAF-AH_p_II: Platelet 71.3 2.9 6.2E-05 39.5 2.3 20 67-86 227-246 (379)
190 COG1073 Hydrolases of the alph 68.0 2.5 5.5E-05 36.6 1.1 57 191-247 223-281 (299)
191 TIGR01849 PHB_depoly_PhaZ poly 67.6 2.5 5.5E-05 40.3 1.1 56 30-88 132-188 (406)
192 PF11144 DUF2920: Protein of u 66.3 12 0.00027 35.6 5.3 27 68-95 184-210 (403)
193 PF11339 DUF3141: Protein of u 65.9 33 0.00071 34.0 8.2 48 46-94 118-165 (581)
194 smart00827 PKS_AT Acyl transfe 64.4 7.9 0.00017 34.6 3.7 28 58-87 73-100 (298)
195 KOG3253 Predicted alpha/beta h 62.7 10 0.00023 38.0 4.2 48 197-245 302-350 (784)
196 KOG3043 Predicted hydrolase re 62.4 6.5 0.00014 34.6 2.5 50 194-244 159-213 (242)
197 PF00698 Acyl_transf_1: Acyl t 60.3 7.1 0.00015 35.6 2.6 28 57-86 74-101 (318)
198 TIGR00128 fabD malonyl CoA-acy 59.7 10 0.00022 33.7 3.5 28 58-87 73-101 (290)
199 TIGR03131 malonate_mdcH malona 59.4 11 0.00024 33.8 3.7 24 58-82 67-90 (295)
200 PF07082 DUF1350: Protein of u 53.2 28 0.00061 31.0 5.0 48 42-91 58-112 (250)
201 PF00091 Tubulin: Tubulin/FtsZ 53.2 18 0.00039 31.1 3.8 43 38-80 91-136 (216)
202 PF11713 Peptidase_C80: Peptid 52.5 9.4 0.0002 31.5 1.8 48 29-80 62-116 (157)
203 PTZ00472 serine carboxypeptida 49.2 5.7 0.00012 38.6 0.0 41 49-89 150-192 (462)
204 COG3946 VirJ Type IV secretory 48.9 28 0.00062 33.3 4.5 42 51-92 306-350 (456)
205 KOG3847 Phospholipase A2 (plat 47.8 6.7 0.00015 36.3 0.3 21 67-87 240-260 (399)
206 COG3509 LpqC Poly(3-hydroxybut 47.6 59 0.0013 29.9 6.2 50 43-95 119-170 (312)
207 PF14253 AbiH: Bacteriophage a 46.8 20 0.00043 31.5 3.2 16 65-80 232-247 (270)
208 PF02129 Peptidase_S15: X-Pro 46.4 19 0.00041 31.9 2.9 73 13-94 53-126 (272)
209 KOG3975 Uncharacterized conser 45.6 44 0.00096 30.1 5.0 51 202-254 245-297 (301)
210 PF00450 Peptidase_S10: Serine 43.9 8.1 0.00017 36.1 0.2 59 190-248 321-404 (415)
211 cd00312 Esterase_lipase Estera 43.1 50 0.0011 31.8 5.6 30 52-82 159-190 (493)
212 PF03583 LIP: Secretory lipase 42.8 43 0.00092 30.3 4.7 46 197-242 217-266 (290)
213 TIGR02816 pfaB_fam PfaB family 41.5 29 0.00063 34.5 3.6 28 57-84 254-281 (538)
214 KOG1282 Serine carboxypeptidas 41.2 28 0.0006 33.9 3.3 52 198-249 362-437 (454)
215 cd02191 FtsZ FtsZ is a GTPase 41.1 64 0.0014 29.5 5.6 36 45-80 62-97 (303)
216 PF03959 FSH1: Serine hydrolas 39.4 47 0.001 28.3 4.3 47 197-245 159-206 (212)
217 TIGR00065 ftsZ cell division p 38.4 42 0.00092 31.4 4.0 35 46-80 80-114 (349)
218 COG0400 Predicted esterase [Ge 38.1 8.1 0.00018 33.4 -0.7 53 196-249 143-198 (207)
219 PF11339 DUF3141: Protein of u 38.0 16 0.00035 36.0 1.2 27 192-218 290-316 (581)
220 PF03959 FSH1: Serine hydrolas 36.8 3.8 8.3E-05 35.1 -3.0 35 51-87 87-121 (212)
221 PF10142 PhoPQ_related: PhoPQ- 36.7 2E+02 0.0043 27.2 8.2 47 196-243 259-306 (367)
222 smart00864 Tubulin Tubulin/Fts 36.4 46 0.00099 28.0 3.7 31 49-79 64-94 (192)
223 PF12146 Hydrolase_4: Putative 34.4 18 0.0004 26.0 0.7 42 11-61 37-78 (79)
224 PRK09330 cell division protein 34.3 57 0.0012 31.0 4.2 36 45-80 75-110 (384)
225 PF04301 DUF452: Protein of un 33.1 39 0.00085 29.4 2.7 21 66-86 55-75 (213)
226 PLN02213 sinapoylglucose-malat 32.9 31 0.00067 31.6 2.2 52 199-251 233-308 (319)
227 PF05577 Peptidase_S28: Serine 32.8 1.5E+02 0.0033 28.1 7.0 28 67-95 112-139 (434)
228 PF03583 LIP: Secretory lipase 32.6 14 0.0003 33.4 -0.1 42 49-91 47-93 (290)
229 KOG2281 Dipeptidyl aminopeptid 32.3 38 0.00083 34.4 2.8 48 195-242 798-848 (867)
230 cd02201 FtsZ_type1 FtsZ is a G 31.6 64 0.0014 29.4 4.0 34 47-80 64-97 (304)
231 PRK13018 cell division protein 31.2 69 0.0015 30.4 4.2 36 45-80 90-125 (378)
232 PF12048 DUF3530: Protein of u 29.5 1.7E+02 0.0037 26.8 6.4 37 51-88 174-213 (310)
233 COG0331 FabD (acyl-carrier-pro 28.8 58 0.0013 30.0 3.2 29 58-87 74-103 (310)
234 KOG1553 Predicted alpha/beta h 27.7 76 0.0016 30.0 3.7 27 66-93 309-335 (517)
235 KOG2183 Prolylcarboxypeptidase 26.2 96 0.0021 30.0 4.2 29 67-96 166-194 (492)
236 PF10561 UPF0565: Uncharacteri 24.7 62 0.0013 29.7 2.6 23 68-90 193-215 (303)
237 PRK13463 phosphatase PhoE; Pro 24.1 2.4E+02 0.0051 23.7 6.0 41 45-89 122-162 (203)
238 PRK03482 phosphoglycerate muta 24.0 2.2E+02 0.0048 24.0 5.9 41 46-90 122-162 (215)
239 PF12475 Amdo_NSP: Amdovirus n 23.8 28 0.0006 22.8 0.1 17 2-18 29-45 (48)
240 COG2272 PnbA Carboxylesterase 23.7 2.1E+02 0.0046 28.1 6.1 72 8-82 115-194 (491)
241 PF02273 Acyl_transf_2: Acyl t 23.7 1.2E+02 0.0025 27.5 4.0 51 191-241 187-238 (294)
242 PF07519 Tannase: Tannase and 22.7 1.2E+02 0.0027 29.5 4.4 30 66-96 113-142 (474)
243 PF00135 COesterase: Carboxyle 22.4 1.3E+02 0.0029 28.7 4.6 31 55-86 194-226 (535)
244 COG1926 Predicted phosphoribos 22.2 1.7E+02 0.0037 25.5 4.6 45 43-92 4-49 (220)
245 PRK13462 acid phosphatase; Pro 22.0 2.5E+02 0.0054 23.7 5.7 40 46-89 119-158 (203)
246 TIGR03162 ribazole_cobC alpha- 21.9 3.3E+02 0.007 21.9 6.3 40 46-89 117-156 (177)
247 cd02202 FtsZ_type2 FtsZ is a G 21.6 1.8E+02 0.0039 27.1 5.1 33 48-80 73-110 (349)
248 PF08250 Sperm_act_pep: Sperm- 21.4 24 0.00052 15.5 -0.4 6 74-79 1-6 (10)
249 KOG1202 Animal-type fatty acid 21.1 1E+02 0.0022 34.1 3.5 43 41-88 2159-2201(2376)
250 KOG3967 Uncharacterized conser 21.0 1.2E+02 0.0025 26.9 3.4 28 65-93 187-214 (297)
251 COG3023 ampD N-acetyl-anhydrom 20.8 1.6E+02 0.0035 26.4 4.3 33 42-76 122-154 (257)
No 1
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=99.95 E-value=1.4e-27 Score=207.95 Aligned_cols=196 Identities=39% Similarity=0.578 Sum_probs=153.6
Q ss_pred ccchhhhhhhhhhhh-ccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcC-CCeEEEEEechhHHHHHH
Q 024115 7 ACKLLHVKLVQYWCL-SFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRN-LRKISFVAHSVGGLVARY 84 (272)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~-~~~i~lVGHSmGG~VaR~ 84 (272)
..||.++++...... .+.. .++.+..+..|.. +|++|++.+|++++++|.+.++.... ..+|+||||||||+|+|+
T Consensus 17 ~~d~~~~~~~l~~~~~~~~~-~~i~~~~~~~n~~-~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~ 94 (217)
T PF05057_consen 17 PADMRYLKNHLEKIPEDLPN-ARIVVLGYSNNEF-KTFDGIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARY 94 (217)
T ss_pred HHHHHHHHHHHHHhhhhcch-hhhhhhccccccc-ccchhhHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHH
Confidence 578989988877631 1221 1445556666655 89999999999999999999984322 369999999999999999
Q ss_pred HHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHHHHHHHHHHHHHHhhccc
Q 024115 85 AIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAANFVIHLIFRRTGR 164 (272)
Q Consensus 85 al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~s~~ 164 (272)
|+..++..... ....+.+.++..|++++|||+|+..........|.++++++.+.+....++.+|+
T Consensus 95 al~~~~~~~~~--------------~~~~~~~~~~~~fitlatPH~G~~~~~~~~v~~g~~~~~~~~~~~~~~~l~~tG~ 160 (217)
T PF05057_consen 95 ALGLLHDKPQY--------------FPGFFQKIKPHNFITLATPHLGSRYASSTLVNFGLWLLSKLKKSLSLRQLGRTGR 160 (217)
T ss_pred HHHHhhhcccc--------------ccccccceeeeeEEEeCCCCCCCcccccccchhhhHHHHHHHHHhhHHHhCcchH
Confidence 99886654310 0012334467899999999999998776545567777888887776778899999
Q ss_pred chhccCCCCCchhhHhhhccCCcchHHHHHhccCCccEEEEecCCCeeecceec
Q 024115 165 HLFLNDNDEGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSNACYDHIVGWRTS 218 (272)
Q Consensus 165 ~l~l~d~~~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa 218 (272)
||++.|......++|.+|+.++++..|.++|++|++++||+|..+|.+||+.|+
T Consensus 161 ~L~l~D~~~~~~~~l~~l~~~~~~~~f~~~L~~F~~~~l~an~~~D~~V~~~s~ 214 (217)
T PF05057_consen 161 QLFLSDSKDNENPLLYKLSQDEPDLSFIEALKRFKRRVLYANIVNDRYVPFHSE 214 (217)
T ss_pred hhccccccCCCCCchHHHhcCCCchHHHHHHHhCCCEEEEEccCCCCccceecC
Confidence 999998766667889999876666789999999999999999999999999983
No 2
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=3.6e-20 Score=170.63 Aligned_cols=244 Identities=38% Similarity=0.466 Sum_probs=140.7
Q ss_pred cchhhhhhhhhhhh-ccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHH
Q 024115 8 CKLLHVKLVQYWCL-SFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al 86 (272)
|||.+.++.++... .++.. ..+.++..|.-.+|.+|++.+|+|+|+++.+.+. ...+.+|+|||||+||+++|||+
T Consensus 92 ~~~~~~~~~~~~~~kk~p~~--~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~-~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 92 ADMEYWKEKIEQMTKKMPDK--LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLY-DYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ccHHHHHHHHHhhhcCCCcc--eEeeeccccchhhccccceeeecccHHHHhhhhh-ccccceeeeeeeecCCeeeeEEE
Confidence 89999999988876 33332 5677776676779999999999999999998887 57789999999999999999999
Q ss_pred HhhcCCCCcCCCCCCcccccccc-ccccccccccceeEEecCC-CCCCCCCCCcccchhhhHHHHHHHHHHHHHHhhccc
Q 024115 87 GKLYRPPKIENGEESSADTSSEN-SRGTMAGLEAINFITVATP-HLGSRGNKQVPFLFGVTAFEKAANFVIHLIFRRTGR 164 (272)
Q Consensus 87 ~~l~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~v~~atP-~~G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~s~~ 164 (272)
+++|...-..-..++|-...... ....++...+..|++.++| |+|.....+.++..|.++.++++. ....+++.
T Consensus 169 gyly~~~~~~f~~v~p~~fitlasp~~gIagleP~yii~~at~~~LG~tG~kq~l~~~g~~~~e~~a~----~~~~~~l~ 244 (405)
T KOG4372|consen 169 GYLYEKAPDFFSDVEPVNFITLASPKLGIAGLEPMYIITLATPGHLGRTGQKQVLFLFGLTFLEKLAA----NISKRTLE 244 (405)
T ss_pred EeecccccccccccCcchhhhhcCCCccccccCchhhhhhhcHHHHhhhcccccccccCCcchhhhcc----cccchhhh
Confidence 99887643210000000000000 0133344455555555555 555554444443333322222221 01233344
Q ss_pred chhccCCCCCchhhHhhhccCCcchHHHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCccccc
Q 024115 165 HLFLNDNDEGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHE 244 (272)
Q Consensus 165 ~l~l~d~~~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e 244 (272)
+|++.+......++.++|+..-.+.||+.+|..+....++.+...|.......+ ......++....+++.++|.+++|
T Consensus 245 ~L~~~d~~~~l~~fkrR~~~an~~nd~Ival~t~~~~~l~~~~~~~~~~~~~~~--~~~~l~~~~~~~~ne~~p~~~~~~ 322 (405)
T KOG4372|consen 245 HLFLADLKEVLPPFKRRMAYANEDNDFIVALYTAALLVLDWNKIHDRLLTFEES--RPSPLPKGQSSPINEKYPHIVNVE 322 (405)
T ss_pred hhccCchhhhhhHHHHHHHhhccccccchhhHHHHHHhcchhhhHHhhhccccc--CCCcccccccCCccccCCcccccc
Confidence 444444333333444444332223344444444444444444434443311111 111234556678889999999999
Q ss_pred CCccCCchhhcccccc
Q 024115 245 HCKACDAEQLDISSME 260 (272)
Q Consensus 245 ~p~~v~~~~~~~~~~~ 260 (272)
.+......-.+-.--|
T Consensus 323 a~~~~~~a~~~~~~~e 338 (405)
T KOG4372|consen 323 APTKPSKALKSWGRTE 338 (405)
T ss_pred CCCchhhhhccccccc
Confidence 9988777665544443
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.65 E-value=5.1e-16 Score=139.66 Aligned_cols=207 Identities=12% Similarity=0.004 Sum_probs=118.8
Q ss_pred hhhhhccCCcceEEEEccCCCCCCCCC--CcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 17 QYWCLSFHNICWIHFVGSERNMSKLTL--DGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~~s~~n~~~~t~--~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
.++|+++|.+ +++.|..... ... .....+ +.+++++.++++ .++++++++|||||||.|+ +.++.++|+++
T Consensus 55 ~~~vi~~Dlp---G~G~S~~~~~-~~~~~~~~~~~-~~~a~~l~~~l~-~l~~~~~~lvGhS~Gg~va-~~~a~~~p~~v 127 (294)
T PLN02824 55 SHRVYAIDLL---GYGYSDKPNP-RSAPPNSFYTF-ETWGEQLNDFCS-DVVGDPAFVICNSVGGVVG-LQAAVDAPELV 127 (294)
T ss_pred CCeEEEEcCC---CCCCCCCCcc-ccccccccCCH-HHHHHHHHHHHH-HhcCCCeEEEEeCHHHHHH-HHHHHhChhhe
Confidence 3688899966 7888874422 111 112224 788999999999 6888999999999999999 66677788764
Q ss_pred cCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchh-hhHHHHHHH-H-HHHHHHhh-----cccch
Q 024115 95 IENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFG-VTAFEKAAN-F-VIHLIFRR-----TGRHL 166 (272)
Q Consensus 95 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g-~~~~~~~~~-~-~~~~~~~~-----s~~~l 166 (272)
..+|.++++..+............ ...+..... . ....++.. ....+
T Consensus 128 -------------------------~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (294)
T PLN02824 128 -------------------------RGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNI 182 (294)
T ss_pred -------------------------eEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHH
Confidence 356666654333211110000000 000000000 0 00000000 00000
Q ss_pred ---hccCCC----------------CCchhhHhhhccCCcchHHHHHhccCCccEEEEecCCCeeecceeccccccCCCC
Q 024115 167 ---FLNDND----------------EGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELP 227 (272)
Q Consensus 167 ---~l~d~~----------------~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip 227 (272)
...+.. .........+..........+.|.++++|+|+++|++|.++|.+.+.. ..+.+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~-~~~~~~ 261 (294)
T PLN02824 183 LCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRA-YANFDA 261 (294)
T ss_pred HHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHH-HHhcCC
Confidence 000000 000001111111000112345688999999999999999999988732 333678
Q ss_pred CCcccccCCCCCcccccCCccCCchhhcc
Q 024115 228 KWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 228 ~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
++++++++++||..++|+|+++++...+-
T Consensus 262 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 262 VEDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred ccceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 89999999999999999999998876653
No 4
>PLN02965 Probable pheophorbidase
Probab=99.64 E-value=5.9e-17 Score=143.12 Aligned_cols=62 Identities=13% Similarity=-0.029 Sum_probs=54.7
Q ss_pred HhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhccc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDIS 257 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~~ 257 (272)
.+.++++|+|+++|.+|.++|+..+ .+.. .+|++++++++++||.+++|+|+++++...+..
T Consensus 188 ~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~--~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~ 250 (255)
T PLN02965 188 NPEAEKVPRVYIKTAKDNLFDPVRQDVMVE--NWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAV 250 (255)
T ss_pred hhhcCCCCEEEEEcCCCCCCCHHHHHHHHH--hCCcceEEEecCCCCchhhcCHHHHHHHHHHHH
Confidence 5668999999999999999999877 4443 699999999999999999999999998887764
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.62 E-value=8.4e-16 Score=138.30 Aligned_cols=204 Identities=14% Similarity=0.046 Sum_probs=115.8
Q ss_pred hhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 13 VKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
+.++ ++++++|.+ +++.|... ...+. . +.+++++.++++ +++++++++|||||||.|+ +.++..+|+
T Consensus 50 L~~~-~~via~D~~---G~G~S~~~-----~~~~~-~-~~~a~dl~~ll~-~l~~~~~~lvGhS~Gg~ia-~~~a~~~p~ 116 (295)
T PRK03592 50 LAGL-GRCLAPDLI---GMGASDKP-----DIDYT-F-ADHARYLDAWFD-ALGLDDVVLVGHDWGSALG-FDWAARHPD 116 (295)
T ss_pred HhhC-CEEEEEcCC---CCCCCCCC-----CCCCC-H-HHHHHHHHHHHH-HhCCCCeEEEEECHHHHHH-HHHHHhChh
Confidence 3334 488899977 78888632 22222 3 788899999999 7899999999999999999 778888998
Q ss_pred CCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHHHHHHH------------HHHHHHHh
Q 024115 93 PKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAAN------------FVIHLIFR 160 (272)
Q Consensus 93 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~------------~~~~~~~~ 160 (272)
++. .++.++++-.-..... .+... ...+..+.. .....++.
T Consensus 117 ~v~-------------------------~lil~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
T PRK03592 117 RVR-------------------------GIAFMEAIVRPMTWDD-FPPAV-RELFQALRSPGEGEEMVLEENVFIERVLP 169 (295)
T ss_pred hee-------------------------EEEEECCCCCCcchhh-cchhH-HHHHHHHhCcccccccccchhhHHhhccc
Confidence 654 3444443211000000 00000 000000000 00000000
Q ss_pred hc-ccch-------h---ccCCCCCchhhH---hhhc-----cC--CcchHHHHHhccCCccEEEEecCCCeeecceecc
Q 024115 161 RT-GRHL-------F---LNDNDEGRPPLL---RRMV-----ED--EDENYFMSALCAFKRRVAYSNACYDHIVGWRTSS 219 (272)
Q Consensus 161 ~s-~~~l-------~---l~d~~~~~~~~L---~~l~-----~~--~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~ 219 (272)
.. ...+ + ..+. ......+ ..+. .+ ....++...|.++++|+|+++|++|.++|...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 248 (295)
T PRK03592 170 GSILRPLSDEEMAVYRRPFPTP-ESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIR 248 (295)
T ss_pred CcccccCCHHHHHHHHhhcCCc-hhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHH
Confidence 00 0000 0 0000 0000000 0000 00 0001345668899999999999999999555552
Q ss_pred ccccCCCCCCcccccCCCCCcccccCCccCCchhhccc
Q 024115 220 IRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDIS 257 (272)
Q Consensus 220 l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~~ 257 (272)
....+.+|++++.+++++||.+++|+|+++++..++..
T Consensus 249 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 286 (295)
T PRK03592 249 DWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWL 286 (295)
T ss_pred HHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHH
Confidence 22233578999999999999999999999998877643
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.61 E-value=6e-16 Score=138.10 Aligned_cols=198 Identities=12% Similarity=0.065 Sum_probs=112.9
Q ss_pred hhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcC
Q 024115 17 QYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIE 96 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~ 96 (272)
.++++++|.+ +|+.|... -..+. . +.+++++.++++ .+++++++||||||||+|+ +.++..+|+++.
T Consensus 51 ~~~vi~~Dl~---G~G~S~~~-----~~~~~-~-~~~~~~~~~~i~-~l~~~~~~LvG~S~GG~va-~~~a~~~p~~v~- 117 (276)
T TIGR02240 51 DLEVIAFDVP---GVGGSSTP-----RHPYR-F-PGLAKLAARMLD-YLDYGQVNAIGVSWGGALA-QQFAHDYPERCK- 117 (276)
T ss_pred CceEEEECCC---CCCCCCCC-----CCcCc-H-HHHHHHHHHHHH-HhCcCceEEEEECHHHHHH-HHHHHHCHHHhh-
Confidence 5778888866 67777522 11222 3 778899999999 7889999999999999999 777777887654
Q ss_pred CCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchh-hhHHHHHH-H-----HHHHHHHhhccc--ch-
Q 024115 97 NGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFG-VTAFEKAA-N-----FVIHLIFRRTGR--HL- 166 (272)
Q Consensus 97 ~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g-~~~~~~~~-~-----~~~~~~~~~s~~--~l- 166 (272)
.+|.++++........ .+.... ........ . ....++...... ..
T Consensus 118 ------------------------~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (276)
T TIGR02240 118 ------------------------KLILAATAAGAVMVPG-KPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELA 172 (276)
T ss_pred ------------------------heEEeccCCccccCCC-chhHHHHhcCchhhhccccccchhhhhccceeeccchhh
Confidence 3333333321100000 000000 00000000 0 000000000000 00
Q ss_pred --hccC-CCCCchhhHhhhccCCcchHHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCccc
Q 024115 167 --FLND-NDEGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVH 242 (272)
Q Consensus 167 --~l~d-~~~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~ 242 (272)
.... ...........+... .+.+..+.|+++++|+|+++|.+|.++|++.+ .+.. .+|+++++++++ ||+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~--~~~~~~~~~i~~-gH~~~ 248 (276)
T TIGR02240 173 MAHASKVRSGGKLGYYWQLFAG-LGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW--RIPNAELHIIDD-GHLFL 248 (276)
T ss_pred hhhhhhcccCCCchHHHHHHHH-cCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH--hCCCCEEEEEcC-CCchh
Confidence 0000 000000111111100 11133456899999999999999999999877 4544 589999999986 99999
Q ss_pred ccCCccCCchhhcc
Q 024115 243 HEHCKACDAEQLDI 256 (272)
Q Consensus 243 ~e~p~~v~~~~~~~ 256 (272)
+|+|+++++..++.
T Consensus 249 ~e~p~~~~~~i~~f 262 (276)
T TIGR02240 249 ITRAEAVAPIIMKF 262 (276)
T ss_pred hccHHHHHHHHHHH
Confidence 99999999888765
No 7
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.61 E-value=9.4e-16 Score=136.25 Aligned_cols=204 Identities=16% Similarity=0.119 Sum_probs=116.7
Q ss_pred hhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 13 VKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
+.+.+|+++++|.+ +++.|..... +.... ..+++++.++++ .++++++++|||||||.|+ +.++..+|+
T Consensus 56 l~~~~~~vi~~D~~---G~G~S~~~~~----~~~~~--~~~~~~l~~~l~-~l~~~~~~lvG~S~Gg~ia-~~~a~~~p~ 124 (282)
T TIGR03343 56 FVDAGYRVILKDSP---GFNKSDAVVM----DEQRG--LVNARAVKGLMD-ALDIEKAHLVGNSMGGATA-LNFALEYPD 124 (282)
T ss_pred HHhCCCEEEEECCC---CCCCCCCCcC----ccccc--chhHHHHHHHHH-HcCCCCeeEEEECchHHHH-HHHHHhChH
Confidence 33457999999976 6777763311 11111 245788999999 7999999999999999999 556666887
Q ss_pred CCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHHHHH-----HHHHHHHHHhh--cc--
Q 024115 93 PKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKA-----ANFVIHLIFRR--TG-- 163 (272)
Q Consensus 93 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~-----~~~~~~~~~~~--s~-- 163 (272)
++. .+|.++++..+.......+. .....+.+. ......+.... ..
T Consensus 125 ~v~-------------------------~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T TIGR03343 125 RIG-------------------------KLILMGPGGLGPSLFAPMPM-EGIKLLFKLYAEPSYETLKQMLNVFLFDQSL 178 (282)
T ss_pred hhc-------------------------eEEEECCCCCCccccccCch-HHHHHHHHHhcCCCHHHHHHHHhhCccCccc
Confidence 643 45555554332111000000 000000000 00000000000 00
Q ss_pred --cch---h---ccCCCCCchhhHhhhcc-CCcchHHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccc
Q 024115 164 --RHL---F---LNDNDEGRPPLLRRMVE-DEDENYFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSL 233 (272)
Q Consensus 164 --~~l---~---l~d~~~~~~~~L~~l~~-~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i 233 (272)
..+ . +...+.....++..... .....++.+.++++++|+|+++|.+|.+||++.+ .+.. .+|++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~--~~~~~~~~~ 256 (282)
T TIGR03343 179 ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLW--NMPDAQLHV 256 (282)
T ss_pred CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHH--hCCCCEEEE
Confidence 000 0 00000000011111100 0112246677899999999999999999998877 3333 589999999
Q ss_pred cCCCCCcccccCCccCCchhhc
Q 024115 234 DEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 234 ~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
++++||.+++|+|+.+++..++
T Consensus 257 i~~agH~~~~e~p~~~~~~i~~ 278 (282)
T TIGR03343 257 FSRCGHWAQWEHADAFNRLVID 278 (282)
T ss_pred eCCCCcCCcccCHHHHHHHHHH
Confidence 9999999999999999876654
No 8
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.57 E-value=3.1e-15 Score=135.29 Aligned_cols=64 Identities=11% Similarity=0.077 Sum_probs=52.6
Q ss_pred HHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCc---ccccCCCCCcccccCCccCCchhhcc
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWE---DSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~---l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
....+.++++|+++++|++|.++|... ..-++.+|+++ +.+++++||.+++|+|+.+++.+++.
T Consensus 231 ~~~~l~~i~~P~lii~G~~D~~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 297 (302)
T PRK00870 231 AWAVLERWDKPFLTAFSDSDPITGGGD--AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEF 297 (302)
T ss_pred HHHhhhcCCCceEEEecCCCCcccCch--HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHH
Confidence 345678999999999999999999754 22334688876 88999999999999999998877654
No 9
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.56 E-value=7.9e-15 Score=141.20 Aligned_cols=61 Identities=18% Similarity=0.136 Sum_probs=53.5
Q ss_pred hccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccc-cCCccCCchhhccc
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHH-EHCKACDAEQLDIS 257 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~-e~p~~v~~~~~~~~ 257 (272)
+..+++|+|+++|++|.++|++.+ .++. .+|++++++++++||..++ |+|+++++..++..
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~--~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~ 476 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKA--KVPRARVKVIDDKDHITIVVGRQKEFARELEEIW 476 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHH--hCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHh
Confidence 347999999999999999999988 4544 5899999999999999996 99999999887754
No 10
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.54 E-value=1.9e-14 Score=134.05 Aligned_cols=67 Identities=12% Similarity=-0.013 Sum_probs=54.8
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec---cc-cccCCCCCCcccccCCCCCcccccCCccCCchhhcc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS---SI-RRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa---~l-~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
+....+.++++|+|+++|++|.++|+..+ .+ ...+.+|++++.+++++||.+++|+|+++++...+-
T Consensus 283 ~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~F 353 (360)
T PLN02679 283 NPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPW 353 (360)
T ss_pred CHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHH
Confidence 45667889999999999999999998742 11 122358999999999999999999999999876554
No 11
>PRK07581 hypothetical protein; Validated
Probab=99.54 E-value=1.4e-14 Score=133.22 Aligned_cols=62 Identities=15% Similarity=-0.015 Sum_probs=54.5
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCC-CCCcccccCCccCCchh
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEK-YPHIVHHEHCKACDAEQ 253 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~-~~H~~~~e~p~~v~~~~ 253 (272)
++.+.|+++++|||+++|++|.++|+..+ .+. +.+|+++++++++ +||..++|+|+++++..
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~--~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEA--ALIPNAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHH--HhCCCCeEEEeCCCCCccccccCcHHHHHHH
Confidence 57788999999999999999999999887 333 3689999999999 99999999999998654
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.54 E-value=1.9e-14 Score=126.68 Aligned_cols=64 Identities=13% Similarity=0.011 Sum_probs=55.8
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
+..+.|.++++|+|+++|.+|.++|.+.+ .+.. .+|++++.+++++||.+++|+|+.|++...+
T Consensus 187 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~--~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~ 251 (256)
T PRK10349 187 DLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK--LWPHSESYIFAKAAHAPFISHPAEFCHLLVA 251 (256)
T ss_pred ccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHH--hCCCCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 56678999999999999999999998876 3333 5899999999999999999999999887654
No 13
>PRK06489 hypothetical protein; Provisional
Probab=99.51 E-value=2.3e-14 Score=133.28 Aligned_cols=66 Identities=15% Similarity=-0.110 Sum_probs=55.0
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCC----CCcccccCCccCCchhhcc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKY----PHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~----~H~~~~e~p~~v~~~~~~~ 256 (272)
+..+.|+++++|+|+++|++|.++|++.+ ....++.+|++++++++++ ||..+ |+|+++++...+.
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~F 353 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEF 353 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHH
Confidence 56778999999999999999999999875 2233446999999999996 99997 8999998866543
No 14
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.51 E-value=2.9e-14 Score=128.60 Aligned_cols=57 Identities=11% Similarity=0.004 Sum_probs=47.8
Q ss_pred CccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 199 KRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 199 ~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
++|+|+++|++|.++|+........+.+|++++++++++||.+++|+|+++++...+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~ 283 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIE 283 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHH
Confidence 899999999999998765432233346999999999999999999999999987754
No 15
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.50 E-value=5e-14 Score=129.04 Aligned_cols=61 Identities=7% Similarity=-0.078 Sum_probs=50.2
Q ss_pred HHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCc
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDA 251 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~ 251 (272)
..+.+..+++|+|+++|.+|.+||++.+ .+......++.+++++++++|.++.|+|+..++
T Consensus 243 ~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~ 304 (330)
T PLN02298 243 LGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIE 304 (330)
T ss_pred HHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHH
Confidence 4556889999999999999999999987 444432346889999999999999999986443
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.50 E-value=5.9e-14 Score=129.93 Aligned_cols=59 Identities=10% Similarity=-0.061 Sum_probs=49.3
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCcc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKA 248 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~ 248 (272)
+....|.+++.|+|+++|.+|.+||++.+ .+...-..++.+++++++++|.+++|.|++
T Consensus 270 ~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~ 329 (349)
T PLN02385 270 EIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDE 329 (349)
T ss_pred HHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChh
Confidence 45567889999999999999999999887 444432236789999999999999999998
No 17
>PHA02857 monoglyceride lipase; Provisional
Probab=99.48 E-value=3.3e-13 Score=120.03 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=47.5
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCK 247 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~ 247 (272)
+....|.++++|+|+++|.+|.++|++.+ .+... ..++.++.+++++||.++.|.++
T Consensus 200 ~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~-~~~~~~~~~~~~~gH~~~~e~~~ 257 (276)
T PHA02857 200 KVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQH-ANCNREIKIYEGAKHHLHKETDE 257 (276)
T ss_pred HHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHH-ccCCceEEEeCCCcccccCCchh
Confidence 45667899999999999999999999988 44432 22468999999999999999884
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.48 E-value=6.1e-15 Score=123.81 Aligned_cols=192 Identities=17% Similarity=0.206 Sum_probs=111.2
Q ss_pred hhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 16 VQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
++++++++|.+ +++.|..... +.... . +..++++.++++ ..+.+++++|||||||.++ +.++..+|+.+
T Consensus 23 ~~~~v~~~d~~---G~G~s~~~~~---~~~~~-~-~~~~~~l~~~l~-~~~~~~~~lvG~S~Gg~~a-~~~a~~~p~~v- 91 (228)
T PF12697_consen 23 RGYRVIAFDLP---GHGRSDPPPD---YSPYS-I-EDYAEDLAELLD-ALGIKKVILVGHSMGGMIA-LRLAARYPDRV- 91 (228)
T ss_dssp TTSEEEEEECT---TSTTSSSHSS---GSGGS-H-HHHHHHHHHHHH-HTTTSSEEEEEETHHHHHH-HHHHHHSGGGE-
T ss_pred CCCEEEEEecC---Cccccccccc---cCCcc-h-hhhhhhhhhccc-ccccccccccccccccccc-ccccccccccc-
Confidence 46666666644 3444442211 11222 3 778899999999 7888999999999999999 54555577643
Q ss_pred CCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHHHHHHHH-------H-----HHHHHhhcc
Q 024115 96 ENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAANF-------V-----IHLIFRRTG 163 (272)
Q Consensus 96 ~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~~-------~-----~~~~~~~s~ 163 (272)
..++.++++......... .....++.++... + ..+......
T Consensus 92 ------------------------~~~vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (228)
T PF12697_consen 92 ------------------------KGLVLLSPPPPLPDSPSR---SFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEP 144 (228)
T ss_dssp ------------------------EEEEEESESSSHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ------------------------ccceeecccccccccccc---cccchhhhhhhhccccccccccccccccccccccc
Confidence 467777766543211000 0000111111110 0 000000000
Q ss_pred cchhccCCCCCchhhHhhhccCCcchHHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCccc
Q 024115 164 RHLFLNDNDEGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVH 242 (272)
Q Consensus 164 ~~l~l~d~~~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~ 242 (272)
.+. +.. ....+...+.......+....+.+++.|++++.|..|.++|.+.. .+.. .+|++++++++++||.++
T Consensus 145 ~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~ 218 (228)
T PF12697_consen 145 EDL-IRS---SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELAD--KLPNAELVVIPGAGHFLF 218 (228)
T ss_dssp HHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHH--HSTTEEEEEETTSSSTHH
T ss_pred ccc-ccc---cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHH--HCCCCEEEEECCCCCccH
Confidence 000 000 001111111100012356678899999999999999999997666 4443 378999999999999999
Q ss_pred ccCCccCCc
Q 024115 243 HEHCKACDA 251 (272)
Q Consensus 243 ~e~p~~v~~ 251 (272)
+|+|++|++
T Consensus 219 ~~~p~~~~~ 227 (228)
T PF12697_consen 219 LEQPDEVAE 227 (228)
T ss_dssp HHSHHHHHH
T ss_pred HHCHHHHhc
Confidence 999999865
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.47 E-value=7.1e-14 Score=120.73 Aligned_cols=65 Identities=17% Similarity=0.099 Sum_probs=55.5
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhcc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
++...+.+++.|+++++|++|.++|++.+ .+.. .+|++++++++++||..+.|+|+++++.+++.
T Consensus 189 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 254 (257)
T TIGR03611 189 DVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAA--ALPNAQLKLLPYGGHASNVTDPETFNRALLDF 254 (257)
T ss_pred CcHHHhcccCccEEEEecCcCcccCHHHHHHHHH--hcCCceEEEECCCCCCccccCHHHHHHHHHHH
Confidence 45567889999999999999999999887 3333 58999999999999999999999998776654
No 20
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.46 E-value=1.4e-13 Score=117.35 Aligned_cols=64 Identities=16% Similarity=0.033 Sum_probs=55.6
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
+....+.+++.|+|+++|.+|.+||++.+ .+.. .+|++++.+++++||.+++|+|+++++...+
T Consensus 179 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 243 (245)
T TIGR01738 179 DLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDK--LAPHSELYIFAKAAHAPFLSHAEAFCALLVA 243 (245)
T ss_pred cHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHH--hCCCCeEEEeCCCCCCccccCHHHHHHHHHh
Confidence 45567889999999999999999999887 3443 5899999999999999999999999887654
No 21
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.46 E-value=1.7e-13 Score=120.69 Aligned_cols=63 Identities=16% Similarity=0.049 Sum_probs=53.4
Q ss_pred HHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
+...+.++++|+|+++|.+|.+||.+.+ .+.. .+|++++++++++||.++.|.|++++....+
T Consensus 212 ~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~--~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 275 (278)
T TIGR03056 212 LNRDLPRITIPLHLIAGEEDKAVPPDESKRAAT--RVPTATLHVVPGGGHLVHEEQADGVVGLILQ 275 (278)
T ss_pred hhhhcccCCCCEEEEEeCCCcccCHHHHHHHHH--hccCCeEEEECCCCCcccccCHHHHHHHHHH
Confidence 4456788999999999999999998876 4433 5899999999999999999999998876654
No 22
>PLN02578 hydrolase
Probab=99.45 E-value=3.7e-13 Score=125.00 Aligned_cols=64 Identities=17% Similarity=0.039 Sum_probs=54.6
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhcc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
+..+.|.++++|+++++|++|.+||.+.+ .+.. .+|+++++++ ++||.+++|+|+++++...+.
T Consensus 287 ~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~--~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~f 351 (354)
T PLN02578 287 TLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKA--FYPDTTLVNL-QAGHCPHDEVPEQVNKALLEW 351 (354)
T ss_pred CHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHH--hCCCCEEEEe-CCCCCccccCHHHHHHHHHHH
Confidence 45667899999999999999999999877 4444 5899999999 589999999999999877653
No 23
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.45 E-value=1.7e-13 Score=119.04 Aligned_cols=194 Identities=13% Similarity=0.017 Sum_probs=106.1
Q ss_pred hhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCC-Cc
Q 024115 17 QYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPP-KI 95 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~-~~ 95 (272)
.|+|+++|.+ +++.|.. +.. ... +.+++++.++++ +.+++++++|||||||.|+ +.++..+++. +
T Consensus 27 ~~~vi~~D~~---G~G~S~~-----~~~--~~~-~~~~~~l~~~l~-~~~~~~~~lvG~S~Gg~va-~~~a~~~~~~~v- 92 (242)
T PRK11126 27 DYPRLYIDLP---GHGGSAA-----ISV--DGF-ADVSRLLSQTLQ-SYNILPYWLVGYSLGGRIA-MYYACQGLAGGL- 92 (242)
T ss_pred CCCEEEecCC---CCCCCCC-----ccc--cCH-HHHHHHHHHHHH-HcCCCCeEEEEECHHHHHH-HHHHHhCCcccc-
Confidence 5899999966 7777752 211 134 788999999999 7899999999999999999 6666667553 3
Q ss_pred CCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCc-ccchhhhHHHHH-----HHHHHHHHHhhcccch---
Q 024115 96 ENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQV-PFLFGVTAFEKA-----ANFVIHLIFRRTGRHL--- 166 (272)
Q Consensus 96 ~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~-p~~~g~~~~~~~-----~~~~~~~~~~~s~~~l--- 166 (272)
..++.++++.......... .......+...+ ...+..|+....-..+
T Consensus 93 ------------------------~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (242)
T PRK11126 93 ------------------------CGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAE 148 (242)
T ss_pred ------------------------cEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCcc
Confidence 2344443321100000000 000000000000 0000001000000000
Q ss_pred ----hccCCCCCchhhHhhhcc---CCcchHHHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCC
Q 024115 167 ----FLNDNDEGRPPLLRRMVE---DEDENYFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPH 239 (272)
Q Consensus 167 ----~l~d~~~~~~~~L~~l~~---~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H 239 (272)
...............+.. .....+..+.++++++|+++++|.+|..+.. ++. .+++++++++++||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~----~~~---~~~~~~~~i~~~gH 221 (242)
T PRK11126 149 QRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQA----LAQ---QLALPLHVIPNAGH 221 (242)
T ss_pred HHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHHH----HHH---HhcCeEEEeCCCCC
Confidence 000000000011111100 0012256678899999999999999986642 222 13789999999999
Q ss_pred cccccCCccCCchhhc
Q 024115 240 IVHHEHCKACDAEQLD 255 (272)
Q Consensus 240 ~~~~e~p~~v~~~~~~ 255 (272)
.+++|+|++++....+
T Consensus 222 ~~~~e~p~~~~~~i~~ 237 (242)
T PRK11126 222 NAHRENPAAFAASLAQ 237 (242)
T ss_pred chhhhChHHHHHHHHH
Confidence 9999999999877654
No 24
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.44 E-value=1.4e-13 Score=127.26 Aligned_cols=61 Identities=15% Similarity=0.049 Sum_probs=51.5
Q ss_pred HhccCCccEEEEecCCCeeecceec-cccccCCC-CCCcccccCC-CCCcccccCCccCCchhhcc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSEL-PKWEDSLDEK-YPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~i-p~a~l~i~~~-~~H~~~~e~p~~v~~~~~~~ 256 (272)
.+.++++|+|+++|++|.++|++.+ .+.. .+ |+++++++++ +||.+++|+|++|++...+.
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~--~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~F 335 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAE--GLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTA 335 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHH--HcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHH
Confidence 3678999999999999999998866 4433 35 7999999985 99999999999999877654
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.44 E-value=1.3e-13 Score=117.81 Aligned_cols=64 Identities=19% Similarity=-0.022 Sum_probs=53.4
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
+....+.+++.|+++++|.+|.++|.+.+ .+.. .+|+.++++++++||.+++|+|+++++...+
T Consensus 184 ~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 248 (251)
T TIGR02427 184 DFRDRLGAIAVPTLCIAGDQDGSTPPELVREIAD--LVPGARFAEIRGAGHIPCVEQPEAFNAALRD 248 (251)
T ss_pred cHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHH--hCCCceEEEECCCCCcccccChHHHHHHHHH
Confidence 45567888999999999999999999876 3333 4788999999999999999999998765543
No 26
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.44 E-value=2.8e-13 Score=125.56 Aligned_cols=64 Identities=14% Similarity=0.096 Sum_probs=55.0
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCccc-----ccCCCCCcccccCCccCCchhhc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDS-----LDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~-----i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
++.+.|+++++|+|+++|.+|.++|+..+ .++. .+|++++. +++++||..++|+|+++++...+
T Consensus 279 ~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~--~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~ 348 (351)
T TIGR01392 279 SLTEALSRIKAPFLVVSITSDWLFPPAESRELAK--ALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRG 348 (351)
T ss_pred CHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHH--HHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHH
Confidence 46788999999999999999999999987 4544 58999887 56899999999999999877654
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.39 E-value=4.8e-13 Score=117.08 Aligned_cols=63 Identities=10% Similarity=-0.012 Sum_probs=51.6
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
+..+.+.++++|+|+++|+.|.+. +..+ .+. +.+|+.++++++++||..++|+|+++++..++
T Consensus 222 ~~~~~l~~i~~P~lii~G~~D~~~-~~~~~~~~--~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 285 (288)
T TIGR01250 222 DITDKLSEIKVPTLLTVGEFDTMT-PEAAREMQ--ELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSD 285 (288)
T ss_pred CHHHHhhccCCCEEEEecCCCccC-HHHHHHHH--HhccCCeEEEeCCCCCCcccCCHHHHHHHHHH
Confidence 456678899999999999999864 4554 333 35799999999999999999999999877654
No 28
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.39 E-value=3.5e-13 Score=117.82 Aligned_cols=60 Identities=13% Similarity=0.050 Sum_probs=50.9
Q ss_pred HhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
.+..+++|+|+++|.+|..|+.+.+ .++. .+|++++.+++++||..++|+|+.++..+.+
T Consensus 190 ~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~ 250 (255)
T PRK10673 190 KIPAWPHPALFIRGGNSPYVTEAYRDDLLA--QFPQARAHVIAGAGHWVHAEKPDAVLRAIRR 250 (255)
T ss_pred ccCCCCCCeEEEECCCCCCCCHHHHHHHHH--hCCCcEEEEeCCCCCeeeccCHHHHHHHHHH
Confidence 3667899999999999999988777 4444 5899999999999999999999988776543
No 29
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.39 E-value=1.1e-13 Score=124.17 Aligned_cols=59 Identities=14% Similarity=-0.016 Sum_probs=48.7
Q ss_pred hccC-CccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhcc
Q 024115 195 LCAF-KRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 195 L~~f-~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
+.++ ++|++|+.|.+|.++|++.+ .+.. .+|+++++.++ +||..++|+|+++.....++
T Consensus 206 ~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~--~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~ 266 (273)
T PLN02211 206 TGDIDKVPRVYIKTLHDHVVKPEQQEAMIK--RWPPSQVYELE-SDHSPFFSTPFLLFGLLIKA 266 (273)
T ss_pred ccccCccceEEEEeCCCCCCCHHHHHHHHH--hCCccEEEEEC-CCCCccccCHHHHHHHHHHH
Confidence 4455 78999999999999999876 4443 57899999997 89999999999997766654
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.38 E-value=9.5e-13 Score=112.04 Aligned_cols=65 Identities=18% Similarity=0.092 Sum_probs=51.5
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccCCccCCchhhcc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
+..+.+.++++|+++++|.+|..++.....+. ..+|+.++++++++||.+++|+|+++++.+.+.
T Consensus 185 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~--~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~ 249 (251)
T TIGR03695 185 SLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQ--KLLPNLTLVIIANAGHNIHLENPEAFAKILLAF 249 (251)
T ss_pred chHHHhhCCCCceEEEeeCcchHHHHHHHHHH--hcCCCCcEEEEcCCCCCcCccChHHHHHHHHHH
Confidence 44566788999999999999987753222333 357899999999999999999999988776553
No 31
>PRK10749 lysophospholipase L2; Provisional
Probab=99.38 E-value=2.2e-12 Score=118.64 Aligned_cols=57 Identities=9% Similarity=-0.031 Sum_probs=45.3
Q ss_pred HHHHhccCCccEEEEecCCCeeecceec-ccccc-----CCCCCCcccccCCCCCcccccCCc
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRN-----SELPKWEDSLDEKYPHIVHHEHCK 247 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~-----~~ip~a~l~i~~~~~H~~~~e~p~ 247 (272)
....+.+++.|+|+++|.+|.+||++.+ .+... ...++++++++++++|.++.|.++
T Consensus 251 ~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~ 313 (330)
T PRK10749 251 VLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA 313 (330)
T ss_pred HHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH
Confidence 4456789999999999999999999876 34321 123567899999999999999874
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.37 E-value=2.7e-12 Score=121.54 Aligned_cols=68 Identities=10% Similarity=-0.017 Sum_probs=53.5
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccCCccCCchhhcccc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDISS 258 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~~~ 258 (272)
+....|.++++|+++++|.+|.++|.....+... .-+.+++++++++||.+++|+|+++|+..+++..
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~~~~~~~~~~-~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~ 383 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNYEGAVEARKR-MKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACR 383 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCcHHHHHHHHH-cCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHH
Confidence 5667788999999999999998876443333322 1245889999999999999999999998887653
No 33
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.31 E-value=2e-12 Score=117.08 Aligned_cols=207 Identities=16% Similarity=0.199 Sum_probs=126.9
Q ss_pred hhhhhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 10 LLHVKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
+..++.++++|+|+|.| +++.|+ .|..-.++..+.++.++..+|+ +++.+++++|||++|++|| ..++..
T Consensus 64 ~~~la~~~~rviA~Dlr---GyG~Sd-----~P~~~~~Yt~~~l~~di~~lld-~Lg~~k~~lvgHDwGaiva-w~la~~ 133 (322)
T KOG4178|consen 64 IPGLASRGYRVIAPDLR---GYGFSD-----APPHISEYTIDELVGDIVALLD-HLGLKKAFLVGHDWGAIVA-WRLALF 133 (322)
T ss_pred hhhhhhcceEEEecCCC---CCCCCC-----CCCCcceeeHHHHHHHHHHHHH-HhccceeEEEeccchhHHH-HHHHHh
Confidence 45677889999999987 788887 4444334444889999999999 8999999999999999999 888898
Q ss_pred cCCCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCC-----------C-c-----ccchhhhHHHHHH-
Q 024115 90 YRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNK-----------Q-V-----PFLFGVTAFEKAA- 151 (272)
Q Consensus 90 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~-----------~-~-----p~~~g~~~~~~~~- 151 (272)
+|+++. .+|++.+|+.+..... + . |...+. .+.+..
T Consensus 134 ~Perv~-------------------------~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~-~~s~~~~ 187 (322)
T KOG4178|consen 134 YPERVD-------------------------GLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPET-ELSKDDT 187 (322)
T ss_pred Chhhcc-------------------------eEEEecCCCCCcccchhhhhccccCccceeEeccccCcchh-hhccchh
Confidence 998764 5666666665111000 0 0 000000 000000
Q ss_pred HHHHHHHHh-hcccchhcc------------------------CCCCCchhhHhhhccCCcchHHHHHhccCCccEEEEe
Q 024115 152 NFVIHLIFR-RTGRHLFLN------------------------DNDEGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSN 206 (272)
Q Consensus 152 ~~~~~~~~~-~s~~~l~l~------------------------d~~~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~ 206 (272)
..+...+.. .++.+.... +.-.+..-.-+.|...+ . -+.-.+++++.|++++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w-~-a~~~~~~~i~iPv~fi~ 265 (322)
T KOG4178|consen 188 EMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNW-E-AAPWALAKITIPVLFIW 265 (322)
T ss_pred HHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCc-h-hccccccccccceEEEE
Confidence 000001111 111000000 00000011122232221 1 12335789999999999
Q ss_pred cCCCeeecce--eccccccCCCCCC-cccccCCCCCcccccCCccCCchhhcc
Q 024115 207 ACYDHIVGWR--TSSIRRNSELPKW-EDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 207 g~~D~iVP~~--sa~l~~~~~ip~a-~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
|+.|.+-++. .+..+. .+|.. +-++++++||-+..|+|++||+..++-
T Consensus 266 G~~D~v~~~p~~~~~~rk--~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f 316 (322)
T KOG4178|consen 266 GDLDPVLPYPIFGELYRK--DVPRLTERVVIEGIGHFVQQEKPQEVNQAILGF 316 (322)
T ss_pred ecCcccccchhHHHHHHH--hhccccceEEecCCcccccccCHHHHHHHHHHH
Confidence 9999997666 333333 47776 678889999999999999999887653
No 34
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.31 E-value=2.6e-13 Score=115.67 Aligned_cols=64 Identities=17% Similarity=-0.052 Sum_probs=55.0
Q ss_pred hHHHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccCCccCCchh
Q 024115 189 NYFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQ 253 (272)
Q Consensus 189 ~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~ 253 (272)
.+....+..++.|+|+++|.+|.++|+..+.. .++.+|++++++++++||..++|.|+++++..
T Consensus 165 ~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 165 WDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred ccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhcCHHhhhhhh
Confidence 36677889999999999999999999999833 22369999999999999999999999987653
No 35
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.30 E-value=5e-12 Score=118.67 Aligned_cols=65 Identities=15% Similarity=-0.021 Sum_probs=54.8
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCC----cccccC-CCCCcccccCCccCCchhhcc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKW----EDSLDE-KYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a----~l~i~~-~~~H~~~~e~p~~v~~~~~~~ 256 (272)
++.+.|.++++|+|+++|.+|.++|++.+ .++. .+|++ ++++++ ++||..++|+|+++++...+.
T Consensus 300 d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~--~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~F 370 (379)
T PRK00175 300 DLAAALARIKARFLVVSFTSDWLFPPARSREIVD--ALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAF 370 (379)
T ss_pred CHHHHHhcCCCCEEEEEECCccccCHHHHHHHHH--HHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHH
Confidence 47788999999999999999999999987 4544 58887 677775 999999999999998766543
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.29 E-value=8.9e-12 Score=115.16 Aligned_cols=62 Identities=10% Similarity=-0.085 Sum_probs=51.1
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
+....+.++++|+|+++|++|.+||++.+.. ..++.++.+++++||..++|+|+++++...+
T Consensus 305 ~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~----l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 366 (371)
T PRK14875 305 DLRDRLASLAIPVLVIWGEQDRIIPAAHAQG----LPDGVAVHVLPGAGHMPQMEAAADVNRLLAE 366 (371)
T ss_pred hHHHHHhcCCCCEEEEEECCCCccCHHHHhh----ccCCCeEEEeCCCCCChhhhCHHHHHHHHHH
Confidence 5666788999999999999999999877521 1245888999999999999999998876654
No 37
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.27 E-value=8.6e-12 Score=117.40 Aligned_cols=195 Identities=12% Similarity=0.142 Sum_probs=113.3
Q ss_pred hhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcC
Q 024115 17 QYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIE 96 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~ 96 (272)
.++++++|-. +|+.|+..... .+.+...+.++++|.++++ +++++++++|||||||.|+ +.++..+|+++
T Consensus 153 ~~~Via~Dlp---G~G~S~~p~~~---~~~~ys~~~~a~~l~~~i~-~l~~~~~~LvG~s~GG~ia-~~~a~~~P~~v-- 222 (383)
T PLN03084 153 NYHAIAFDWL---GFGFSDKPQPG---YGFNYTLDEYVSSLESLID-ELKSDKVSLVVQGYFSPPV-VKYASAHPDKI-- 222 (383)
T ss_pred CCEEEEECCC---CCCCCCCCccc---ccccCCHHHHHHHHHHHHH-HhCCCCceEEEECHHHHHH-HHHHHhChHhh--
Confidence 6888888865 78877633210 0111112788999999999 7899999999999999999 56667788764
Q ss_pred CCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHHHHHHHHHHHH------------HHhhccc
Q 024115 97 NGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAANFVIHL------------IFRRTGR 164 (272)
Q Consensus 97 ~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~~~~~~------------~~~~s~~ 164 (272)
..+|.+++|...... ..+... ..+.+.+... .+.....
T Consensus 223 -----------------------~~lILi~~~~~~~~~--~~p~~l-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 272 (383)
T PLN03084 223 -----------------------KKLILLNPPLTKEHA--KLPSTL-----SEFSNFLLGEIFSQDPLRASDKALTSCGP 272 (383)
T ss_pred -----------------------cEEEEECCCCccccc--cchHHH-----HHHHHHHhhhhhhcchHHHHhhhhcccCc
Confidence 366777766432110 011100 0000000000 0000000
Q ss_pred c-h------hccCC--CCCc-----hhhHhhhccCCcchHHHHHh------ccCCccEEEEecCCCeeecceec-ccccc
Q 024115 165 H-L------FLNDN--DEGR-----PPLLRRMVEDEDENYFMSAL------CAFKRRVAYSNACYDHIVGWRTS-SIRRN 223 (272)
Q Consensus 165 ~-l------~l~d~--~~~~-----~~~L~~l~~~~~~~d~~~~L------~~f~~p~L~~~g~~D~iVP~~sa-~l~~~ 223 (272)
. + ..... ..+. ..+.+.+.... ..+.+.+ ..++.|+|+++|+.|.++|.+.+ .+..
T Consensus 273 ~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l--~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~- 349 (383)
T PLN03084 273 YAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKEL--KKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCK- 349 (383)
T ss_pred cCCCHHHHHHHhccccCCcchHHHHHHHHHHhhccc--chhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHH-
Confidence 0 0 00000 0000 01122221110 0111112 35799999999999999999876 3333
Q ss_pred CCCCCCcccccCCCCCcccccCCccCCchhhcc
Q 024115 224 SELPKWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 224 ~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
.+++++.+++++||.+++|+|+++++...+.
T Consensus 350 --~~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~F 380 (383)
T PLN03084 350 --SSQHKLIELPMAGHHVQEDCGEELGGIISGI 380 (383)
T ss_pred --hcCCeEEEECCCCCCcchhCHHHHHHHHHHH
Confidence 3588999999999999999999999887654
No 38
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.25 E-value=6e-12 Score=116.02 Aligned_cols=62 Identities=19% Similarity=0.087 Sum_probs=53.0
Q ss_pred HHHHhccCC-ccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhh
Q 024115 191 FMSALCAFK-RRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQL 254 (272)
Q Consensus 191 ~~~~L~~f~-~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~ 254 (272)
..+.+.++. +|+|+++|..|.++|.+.+ .+... +|++++++++++||.+++|.|+++++...
T Consensus 255 ~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~--~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~ 318 (326)
T KOG1454|consen 255 LLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKK--LPNAELVEIPGAGHLPHLERPEEVAALLR 318 (326)
T ss_pred HHHhhccccCCceEEEEcCcCCccCHHHHHHHHhh--CCCceEEEeCCCCcccccCCHHHHHHHHH
Confidence 334567777 9999999999999999977 55553 59999999999999999999999988654
No 39
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.21 E-value=2.1e-11 Score=115.00 Aligned_cols=65 Identities=14% Similarity=-0.018 Sum_probs=54.6
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCC----CCcccccCC-CCCcccccCCccCCchhhcc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELP----KWEDSLDEK-YPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip----~a~l~i~~~-~~H~~~~e~p~~v~~~~~~~ 256 (272)
++.+.|++++.|+|+++|.+|.++|++.+ .+.. .+| +++++++++ +||..++|+|+++++...+.
T Consensus 314 dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~--~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~F 384 (389)
T PRK06765 314 SLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVD--ILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEF 384 (389)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHH--HhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHH
Confidence 57888999999999999999999999877 3443 354 688999985 99999999999998876543
No 40
>PLN02511 hydrolase
Probab=99.21 E-value=1.6e-11 Score=115.70 Aligned_cols=58 Identities=12% Similarity=-0.056 Sum_probs=48.9
Q ss_pred HHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccCCccC
Q 024115 192 MSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEHCKAC 249 (272)
Q Consensus 192 ~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v 249 (272)
...|.++++|+|+++|++|.++|...........+|++++.+++++||+.++|.|+.+
T Consensus 291 ~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~ 348 (388)
T PLN02511 291 SDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAP 348 (388)
T ss_pred hhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCC
Confidence 4578899999999999999999987653333346899999999999999999999754
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.18 E-value=2e-11 Score=132.72 Aligned_cols=205 Identities=15% Similarity=0.079 Sum_probs=109.2
Q ss_pred hhhhhccCCcceEEEEccCCCCCCC-CCCc-HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 17 QYWCLSFHNICWIHFVGSERNMSKL-TLDG-VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~~s~~n~~~~-t~~g-~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
.++++.+|.+ +|+.|......+ +... .... +.+++++.++++ +++++++++|||||||.|+ +.++..+|+++
T Consensus 1397 ~~rVi~~Dl~---G~G~S~~~~~~~~~~~~~~~si-~~~a~~l~~ll~-~l~~~~v~LvGhSmGG~iA-l~~A~~~P~~V 1470 (1655)
T PLN02980 1397 SARCISIDLP---GHGGSKIQNHAKETQTEPTLSV-ELVADLLYKLIE-HITPGKVTLVGYSMGARIA-LYMALRFSDKI 1470 (1655)
T ss_pred CCEEEEEcCC---CCCCCCCccccccccccccCCH-HHHHHHHHHHHH-HhCCCCEEEEEECHHHHHH-HHHHHhChHhh
Confidence 4778888865 666664321100 0111 1123 788999999999 7888999999999999999 66777788765
Q ss_pred cCCCCCCccccccccccccccccccceeEEec-CCCCCCCCCCCcccc--hhh-hHHHH--HHHHHHHHHHhhcccch--
Q 024115 95 IENGEESSADTSSENSRGTMAGLEAINFITVA-TPHLGSRGNKQVPFL--FGV-TAFEK--AANFVIHLIFRRTGRHL-- 166 (272)
Q Consensus 95 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~a-tP~~G~~~~~~~p~~--~g~-~~~~~--~~~~~~~~~~~~s~~~l-- 166 (272)
. .++.++ +|............. ... ..+.. +...+..|+.......+
T Consensus 1471 ~-------------------------~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 1525 (1655)
T PLN02980 1471 E-------------------------GAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRN 1525 (1655)
T ss_pred C-------------------------EEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhcc
Confidence 3 344443 232111100000000 000 00000 00000011100000000
Q ss_pred ----------hccC-CCCCchhhHhhhccCCcchHHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCC------
Q 024115 167 ----------FLND-NDEGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPK------ 228 (272)
Q Consensus 167 ----------~l~d-~~~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~------ 228 (272)
.+.. ........+..+... ...+..+.|.+++.|+|+++|++|.++| ..+ .+.. .+|+
T Consensus 1526 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~--~i~~a~~~~~ 1601 (1655)
T PLN02980 1526 HPHFNKIVASRLLHKDVPSLAKLLSDLSIG-RQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYR--EIGKSKESGN 1601 (1655)
T ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhhc-ccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHH--Hccccccccc
Confidence 0000 000000112222110 1225667899999999999999999876 333 3322 2443
Q ss_pred ------CcccccCCCCCcccccCCccCCchhhcc
Q 024115 229 ------WEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 229 ------a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
+++++++++||.+++|+|+++++...+.
T Consensus 1602 ~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~F 1635 (1655)
T PLN02980 1602 DKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKF 1635 (1655)
T ss_pred cccccceEEEEECCCCCchHHHCHHHHHHHHHHH
Confidence 5899999999999999999998665443
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.18 E-value=2.8e-11 Score=109.93 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=51.5
Q ss_pred hhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 15 LVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
..+|+++++|.+ +++.|..... ..... . +.+++++..+++ +++++++++|||||||.++ +.++..+|+++
T Consensus 51 ~~~~~vi~~D~~---G~G~S~~~~~---~~~~~-~-~~~~~dl~~l~~-~l~~~~~~lvG~S~GG~ia-~~~a~~~p~~v 120 (306)
T TIGR01249 51 PETYRIVLFDQR---GCGKSTPHAC---LEENT-T-WDLVADIEKLRE-KLGIKNWLVFGGSWGSTLA-LAYAQTHPEVV 120 (306)
T ss_pred ccCCEEEEECCC---CCCCCCCCCC---cccCC-H-HHHHHHHHHHHH-HcCCCCEEEEEECHHHHHH-HHHHHHChHhh
Confidence 357888888866 6787763321 11111 2 678899999998 7899999999999999999 55556688765
Q ss_pred c
Q 024115 95 I 95 (272)
Q Consensus 95 ~ 95 (272)
.
T Consensus 121 ~ 121 (306)
T TIGR01249 121 T 121 (306)
T ss_pred h
Confidence 3
No 43
>PRK10985 putative hydrolase; Provisional
Probab=99.13 E-value=2.7e-10 Score=104.58 Aligned_cols=53 Identities=17% Similarity=0.067 Sum_probs=44.7
Q ss_pred HHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccC
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEH 245 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~ 245 (272)
..+.|+++++|+|+++|++|.++|.+.. .+. +..|+.++.+.+++||+.++|-
T Consensus 247 ~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~--~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 247 ALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPE--SLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred hHHHHhCCCCCEEEEecCCCCCCChhhChHHH--HhCCCeEEEECCCCCceeeCCC
Confidence 4467899999999999999999998766 333 3578899999999999999985
No 44
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.12 E-value=2.1e-10 Score=108.40 Aligned_cols=66 Identities=9% Similarity=0.059 Sum_probs=50.8
Q ss_pred HHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCccccc-CCccCCchhhcc
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHE-HCKACDAEQLDI 256 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e-~p~~v~~~~~~~ 256 (272)
..+.|.++++|+|+++|.+|.+||++.+ .+.....-++.++.++++++|.++.| +++++.++..+-
T Consensus 316 l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~F 383 (395)
T PLN02652 316 LTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDW 383 (395)
T ss_pred HHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHH
Confidence 4567889999999999999999999888 44332122457899999999999777 677777765543
No 45
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.10 E-value=4.6e-10 Score=109.47 Aligned_cols=59 Identities=17% Similarity=0.032 Sum_probs=50.7
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCC
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACD 250 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~ 250 (272)
+....|+.+++|+|++.|++|.+||++++ .+.. .+++....+++++||+.++|.|..=+
T Consensus 406 g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~--~i~~~~~~vL~~sGHi~~ienPp~~~ 465 (532)
T TIGR01838 406 GVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAA--LLGGPKTFVLGESGHIAGVVNPPSKN 465 (532)
T ss_pred CEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHH--HCCCCEEEEECCCCCchHhhCCCCCC
Confidence 45568899999999999999999999988 3433 58899999999999999999997643
No 46
>PRK05855 short chain dehydrogenase; Validated
Probab=99.04 E-value=2.3e-10 Score=111.70 Aligned_cols=58 Identities=12% Similarity=-0.086 Sum_probs=46.4
Q ss_pred hccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
+..+++|+|+++|++|.+||...+ .+. ..+|+..+++++ +||..+.|+|++++....+
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~--~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~ 287 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLS--RWVPRLWRREIK-AGHWLPMSHPQVLAAAVAE 287 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhcccc--ccCCcceEEEcc-CCCcchhhChhHHHHHHHH
Confidence 445899999999999999998877 443 357888888876 5899999999988555443
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.03 E-value=1.4e-09 Score=100.45 Aligned_cols=61 Identities=10% Similarity=0.087 Sum_probs=45.9
Q ss_pred HhccC--CccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccC-CccCCchhh
Q 024115 194 ALCAF--KRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEH-CKACDAEQL 254 (272)
Q Consensus 194 ~L~~f--~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~-p~~v~~~~~ 254 (272)
.+..+ +.|+|+++|.+|.+||++.+ .+......++.++.++++++|.++.|. .+++.++.+
T Consensus 263 ~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~ 327 (332)
T TIGR01607 263 DIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKII 327 (332)
T ss_pred hHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHH
Confidence 45556 68999999999999999887 343322347889999999999999986 355544443
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.00 E-value=1.4e-09 Score=103.41 Aligned_cols=187 Identities=12% Similarity=-0.038 Sum_probs=102.1
Q ss_pred hhhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhc--CCCeEEEEEechhHHHHHHHHHhh
Q 024115 12 HVKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKR--NLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~--~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
++..+||.++.+|-+ +++.|... +.. .+ . ..+.+.+.+.+.... +..+|.++||||||+++ +.++..
T Consensus 217 ~La~~Gy~vl~~D~p---G~G~s~~~----~~~-~d-~-~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~A-l~~A~~ 285 (414)
T PRK05077 217 YLAPRGIAMLTIDMP---SVGFSSKW----KLT-QD-S-SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVA-VRLAYL 285 (414)
T ss_pred HHHhCCCEEEEECCC---CCCCCCCC----Ccc-cc-H-HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHH-HHHHHh
Confidence 456778888888855 45555321 111 11 1 344566777776333 56899999999999988 656665
Q ss_pred cCCCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHHHHHHHHHHHHHHhhcccchhcc
Q 024115 90 YRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAANFVIHLIFRRTGRHLFLN 169 (272)
Q Consensus 90 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~s~~~l~l~ 169 (272)
+|+++ ...|.+++|......... . +..+..... ..+.. .+...
T Consensus 286 ~p~ri-------------------------~a~V~~~~~~~~~~~~~~---~-----~~~~p~~~~-~~la~---~lg~~ 328 (414)
T PRK05077 286 EPPRL-------------------------KAVACLGPVVHTLLTDPK---R-----QQQVPEMYL-DVLAS---RLGMH 328 (414)
T ss_pred CCcCc-------------------------eEEEEECCccchhhcchh---h-----hhhchHHHH-HHHHH---HhCCC
Confidence 66654 256677666422111000 0 000000000 01110 01010
Q ss_pred CCCCCchhhHhhhccCCcchHHHHHh-ccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCc
Q 024115 170 DNDEGRPPLLRRMVEDEDENYFMSAL-CAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCK 247 (272)
Q Consensus 170 d~~~~~~~~L~~l~~~~~~~d~~~~L-~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~ 247 (272)
. .....+...+.. . .......+ +++++|+|+++|++|.+||++.+ .+.. .+|+++++++++. .+.|.++
T Consensus 329 ~--~~~~~l~~~l~~-~-sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~--~~~~~~l~~i~~~---~~~e~~~ 399 (414)
T PRK05077 329 D--ASDEALRVELNR-Y-SLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIAS--SSADGKLLEIPFK---PVYRNFD 399 (414)
T ss_pred C--CChHHHHHHhhh-c-cchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHH--hCCCCeEEEccCC---CccCCHH
Confidence 1 011112222210 0 00111122 57999999999999999999998 4443 5799999999997 3456777
Q ss_pred cCCchhhc
Q 024115 248 ACDAEQLD 255 (272)
Q Consensus 248 ~v~~~~~~ 255 (272)
+++...++
T Consensus 400 ~~~~~i~~ 407 (414)
T PRK05077 400 KALQEISD 407 (414)
T ss_pred HHHHHHHH
Confidence 66665543
No 49
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.94 E-value=7e-09 Score=94.57 Aligned_cols=53 Identities=15% Similarity=-0.017 Sum_probs=42.7
Q ss_pred hccCCccEEEEecCCCeeec-ceec-cccccCCCCCCcccccCCCCCcccccCCc
Q 024115 195 LCAFKRRVAYSNACYDHIVG-WRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCK 247 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP-~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~ 247 (272)
...++.|+|+.+|..|.+|+ .+.+ .+...-..|+.++++++++.|-+..|.+.
T Consensus 224 ~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~ 278 (298)
T COG2267 224 APAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDR 278 (298)
T ss_pred cccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcch
Confidence 45778999999999999999 4544 34343467889999999999999888776
No 50
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.90 E-value=1.9e-09 Score=98.52 Aligned_cols=67 Identities=21% Similarity=0.296 Sum_probs=48.6
Q ss_pred ccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcC
Q 024115 22 SFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIE 96 (272)
Q Consensus 22 ~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~ 96 (272)
++| .++|++|..=. .+.+....- +.+.+-|++... ..++.|.+||||||||+++ ...+..||++++.
T Consensus 121 aiD---llG~G~SSRP~--F~~d~~~~e-~~fvesiE~WR~-~~~L~KmilvGHSfGGYLa-a~YAlKyPerV~k 187 (365)
T KOG4409|consen 121 AID---LLGFGRSSRPK--FSIDPTTAE-KEFVESIEQWRK-KMGLEKMILVGHSFGGYLA-AKYALKYPERVEK 187 (365)
T ss_pred Eec---ccCCCCCCCCC--CCCCcccch-HHHHHHHHHHHH-HcCCcceeEeeccchHHHH-HHHHHhChHhhce
Confidence 555 46888876332 234443322 566777777777 6899999999999999998 6677789999864
No 51
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.88 E-value=1.2e-08 Score=89.47 Aligned_cols=84 Identities=30% Similarity=0.342 Sum_probs=53.3
Q ss_pred EEEEccCCCCCCCCCCc--HHHHHHHHHHHHHHHHHHh----cCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCc
Q 024115 29 IHFVGSERNMSKLTLDG--VDVMGERLAQEVLEVIERK----RNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESS 102 (272)
Q Consensus 29 ~~~~~s~~n~~~~t~~g--~~~~~~~lA~~v~~ll~~~----~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~ 102 (272)
+.++.-+-|.....+.| +...++.+++.+..+++.. .+.++|++|||||||+|+|.++.. .+..
T Consensus 40 ~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~-~~~~--------- 109 (225)
T PF07819_consen 40 FDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSL-PNYD--------- 109 (225)
T ss_pred eeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhc-cccc---------
Confidence 34444443433223333 3334455666666665522 367899999999999999998854 2211
Q ss_pred cccccccccccccccccceeEEecCCCCCCCCC
Q 024115 103 ADTSSENSRGTMAGLEAINFITVATPHLGSRGN 135 (272)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~ 135 (272)
...+..+|+++|||.|++.+
T Consensus 110 -------------~~~v~~iitl~tPh~g~~~~ 129 (225)
T PF07819_consen 110 -------------PDSVKTIITLGTPHRGSPLA 129 (225)
T ss_pred -------------cccEEEEEEEcCCCCCcccc
Confidence 12356899999999999864
No 52
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.86 E-value=1e-08 Score=95.08 Aligned_cols=57 Identities=18% Similarity=0.028 Sum_probs=40.2
Q ss_pred HhccCCccEEEEecCCCeeecceec-cccccCCCCC--CcccccCCCCCcccccCC---ccCCchh
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPK--WEDSLDEKYPHIVHHEHC---KACDAEQ 253 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~--a~l~i~~~~~H~~~~e~p---~~v~~~~ 253 (272)
.|+++++|+++++|.+|.++|+..+ .+.. .+++ -++.+++ +||...+..+ +++.++.
T Consensus 281 ~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~--~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i 343 (350)
T TIGR01836 281 DLKNIKMPILNIYAERDHLVPPDASKALND--LVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAI 343 (350)
T ss_pred cHHhCCCCeEEEecCCCCcCCHHHHHHHHH--HcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHH
Confidence 4778999999999999999999877 4433 3544 3445666 6888877665 4444443
No 53
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.85 E-value=3.7e-09 Score=91.00 Aligned_cols=186 Identities=14% Similarity=0.095 Sum_probs=104.0
Q ss_pred hhhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcC
Q 024115 12 HVKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYR 91 (272)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~ 91 (272)
++.++||.|.+..=+ +|+.... .+.+...-+.. ++. .+....+. ..+-+.|.++|.||||+++ +.++..+|
T Consensus 37 ~L~e~GyTv~aP~yp---GHG~~~e--~fl~t~~~DW~-~~v-~d~Y~~L~-~~gy~eI~v~GlSmGGv~a-lkla~~~p 107 (243)
T COG1647 37 YLNENGYTVYAPRYP---GHGTLPE--DFLKTTPRDWW-EDV-EDGYRDLK-EAGYDEIAVVGLSMGGVFA-LKLAYHYP 107 (243)
T ss_pred HHHHCCceEecCCCC---CCCCCHH--HHhcCCHHHHH-HHH-HHHHHHHH-HcCCCeEEEEeecchhHHH-HHHHhhCC
Confidence 445567777655422 3433221 11222222332 222 33333333 3577899999999999999 88888776
Q ss_pred CCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHHHHHHHHHHHHHHhhcccch-----
Q 024115 92 PPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAANFVIHLIFRRTGRHL----- 166 (272)
Q Consensus 92 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~s~~~l----- 166 (272)
. ..++.+++|......... ..+ +++.+-+ .+.+.++...+.
T Consensus 108 ~---------------------------K~iv~m~a~~~~k~~~~i---ie~--~l~y~~~--~kk~e~k~~e~~~~e~~ 153 (243)
T COG1647 108 P---------------------------KKIVPMCAPVNVKSWRII---IEG--LLEYFRN--AKKYEGKDQEQIDKEMK 153 (243)
T ss_pred c---------------------------cceeeecCCcccccchhh---hHH--HHHHHHH--hhhccCCCHHHHHHHHH
Confidence 3 267889988875443211 111 1111000 001111111111
Q ss_pred hccCCCCCchhhHhhhccCCcchHHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccC
Q 024115 167 FLNDNDEGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEH 245 (272)
Q Consensus 167 ~l~d~~~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~ 245 (272)
...+.+.....-+..+.. +.+..+..|..|++++-|++|.+||.++| -|-.+..--.=+|.++++.||++....
T Consensus 154 ~~~~~~~~~~~~~~~~i~-----~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~ 228 (243)
T COG1647 154 SYKDTPMTTTAQLKKLIK-----DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDK 228 (243)
T ss_pred HhhcchHHHHHHHHHHHH-----HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecch
Confidence 011111111122333322 56667889999999999999999999999 665553334567999999999996643
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.84 E-value=1.3e-08 Score=91.44 Aligned_cols=65 Identities=15% Similarity=0.019 Sum_probs=45.4
Q ss_pred HHHHHhccCCccEEEEecCCCeeeccee------ccccccCCCCCCcccccCCCCCcccccCC-ccCCchhh
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRT------SSIRRNSELPKWEDSLDEKYPHIVHHEHC-KACDAEQL 254 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~s------a~l~~~~~ip~a~l~i~~~~~H~~~~e~p-~~v~~~~~ 254 (272)
+....|.++++|+|++.|..|...+... ...+..-..|+.++.++++++|.+..|.+ +++++...
T Consensus 198 ~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~ 269 (274)
T TIGR03100 198 RMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTT 269 (274)
T ss_pred HHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHH
Confidence 5566788899999999999998875322 11122112388999999999999855555 66655543
No 55
>PRK13604 luxD acyl transferase; Provisional
Probab=98.74 E-value=5.5e-08 Score=88.68 Aligned_cols=61 Identities=7% Similarity=-0.155 Sum_probs=46.7
Q ss_pred HHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhc
Q 024115 193 SALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 193 ~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
+.+..++.|+|+++|.+|.+||++.+ .+..+..-...++.+++|+.|.+.. +-.|.++|.|
T Consensus 196 ~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~--~~~~~~~~~~ 257 (307)
T PRK13604 196 NKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE--NLVVLRNFYQ 257 (307)
T ss_pred HHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc--chHHHHHHHH
Confidence 45677889999999999999999998 5544322247889999999998764 3455566665
No 56
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.73 E-value=7e-09 Score=94.11 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=48.9
Q ss_pred ccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhh
Q 024115 196 CAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQL 254 (272)
Q Consensus 196 ~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~ 254 (272)
..+..|||++.|.++..||.+.- .+.. .+|.++++.++.+||.+|.|.|++++....
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~~~~~~~~--~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDEHYPRMEK--IFPNVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred cccccceeEEecCCCCCcChhHHHHHHH--hccchheeecccCCceeecCCHHHHHHHHH
Confidence 78899999999999999988855 4444 589999999999999999999999876543
No 57
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.72 E-value=2.6e-08 Score=89.48 Aligned_cols=69 Identities=12% Similarity=-0.033 Sum_probs=54.7
Q ss_pred hHHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccc-cCCccCCchhhccc
Q 024115 189 NYFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHH-EHCKACDAEQLDIS 257 (272)
Q Consensus 189 ~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~-e~p~~v~~~~~~~~ 257 (272)
.+....|.+++.|.++.||..|.++-+..| .+-+...-.+=++++|||.=|.+.. |-++.++-=|-|+.
T Consensus 236 ~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~ 306 (313)
T KOG1455|consen 236 ADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDII 306 (313)
T ss_pred HHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHH
Confidence 467788999999999999999999988888 4443334567789999999999987 77777766555553
No 58
>PRK11071 esterase YqiA; Provisional
Probab=98.68 E-value=6.5e-08 Score=82.43 Aligned_cols=39 Identities=15% Similarity=0.228 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcC
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYR 91 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~ 91 (272)
+.+++.+.++++ ..+.+++++|||||||.|+ ..++..+|
T Consensus 45 ~~~~~~l~~l~~-~~~~~~~~lvG~S~Gg~~a-~~~a~~~~ 83 (190)
T PRK11071 45 ADAAELLESLVL-EHGGDPLGLVGSSLGGYYA-TWLSQCFM 83 (190)
T ss_pred HHHHHHHHHHHH-HcCCCCeEEEEECHHHHHH-HHHHHHcC
Confidence 567888999998 6888999999999999999 66666565
No 59
>PRK10566 esterase; Provisional
Probab=98.65 E-value=2.8e-08 Score=86.99 Aligned_cols=51 Identities=14% Similarity=0.097 Sum_probs=36.7
Q ss_pred HHHhccC-CccEEEEecCCCeeecceec-cccccC---CCC-CCcccccCCCCCccc
Q 024115 192 MSALCAF-KRRVAYSNACYDHIVGWRTS-SIRRNS---ELP-KWEDSLDEKYPHIVH 242 (272)
Q Consensus 192 ~~~L~~f-~~p~L~~~g~~D~iVP~~sa-~l~~~~---~ip-~a~l~i~~~~~H~~~ 242 (272)
...+.++ +.|+|+++|.+|.+||++.+ .+..+- ..+ ..++..+++.+|.+.
T Consensus 178 ~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~ 234 (249)
T PRK10566 178 THQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT 234 (249)
T ss_pred hhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC
Confidence 3445665 78999999999999999887 443321 122 356778999999874
No 60
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.58 E-value=1.1e-06 Score=79.64 Aligned_cols=128 Identities=20% Similarity=0.184 Sum_probs=75.4
Q ss_pred CeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHH
Q 024115 68 RKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAF 147 (272)
Q Consensus 68 ~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~ 147 (272)
+-+++||||.||+++|.++.+ .+.. ..+.+||++++||.|...-...+ .. .++
T Consensus 94 ~G~naIGfSQGGlflRa~ier-c~~~-----------------------p~V~nlISlggph~Gv~g~p~C~--~~-~~~ 146 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEF-CDGG-----------------------PPVYNYISLAGPHAGISSLPRCG--TS-GLI 146 (314)
T ss_pred CcEEEEEEccchHHHHHHHHH-CCCC-----------------------CCcceEEEecCCCCCeeCCCCCC--cc-hhh
Confidence 469999999999999998876 4431 02569999999999987522211 00 111
Q ss_pred HHHHHHHHHH-HHhh-cccch----hccCCCC-----CchhhHhhhccCCc---chHHHHHhccCCccEEEEecCCCeee
Q 024115 148 EKAANFVIHL-IFRR-TGRHL----FLNDNDE-----GRPPLLRRMVEDED---ENYFMSALCAFKRRVAYSNACYDHIV 213 (272)
Q Consensus 148 ~~~~~~~~~~-~~~~-s~~~l----~l~d~~~-----~~~~~L~~l~~~~~---~~d~~~~L~~f~~p~L~~~g~~D~iV 213 (272)
-+.++.++.. ..+. ..+.+ ...|+.. ..+.+|..+....+ +..+++.+.+.++-+||.--+++.++
T Consensus 147 C~~~~~ll~~~~Ys~~vQ~~lv~A~Yw~DP~~~d~Yl~~s~FLadINNEr~~~~n~tyK~Nf~~L~~~Vlv~f~~DtvV~ 226 (314)
T PLN02633 147 CKIANELIKGDVYSDFIQDHLAPSGYYKIPKDVTEYLKGSKYLPKLNNEIPDQRNQTYKDRFTSLQNLVLVKFQNDTVIV 226 (314)
T ss_pred HHHHHHHHhhCCccHHHHhccccccccCCchhHHHHHhcCcchhhhhCcCcccccHHHHHHHHhhhceEEEecCCCceEC
Confidence 1212111100 1111 11111 1222210 12467777775433 45688999999999998884444457
Q ss_pred cceeccccc
Q 024115 214 GWRTSSIRR 222 (272)
Q Consensus 214 P~~sa~l~~ 222 (272)
|++||.+.-
T Consensus 227 PkeSswFg~ 235 (314)
T PLN02633 227 PKDSSWFGF 235 (314)
T ss_pred CCcccccee
Confidence 999996654
No 61
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.56 E-value=1.7e-07 Score=89.77 Aligned_cols=67 Identities=19% Similarity=0.295 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEe
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITV 125 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~ 125 (272)
.+...+.+++.|.++.+ ..+.++|+||||||||+++++.+.. +++... ..+.++|++
T Consensus 141 ~~~~~~~Lk~lIe~~~~-~~g~~kV~LVGHSMGGlva~~fl~~-~p~~~~---------------------k~I~~~I~l 197 (440)
T PLN02733 141 LPETMDGLKKKLETVYK-ASGGKKVNIISHSMGGLLVKCFMSL-HSDVFE---------------------KYVNSWIAI 197 (440)
T ss_pred HHHHHHHHHHHHHHHHH-HcCCCCEEEEEECHhHHHHHHHHHH-CCHhHH---------------------hHhccEEEE
Confidence 34344777777777777 5777899999999999999887654 665321 125689999
Q ss_pred cCCCCCCCCC
Q 024115 126 ATPHLGSRGN 135 (272)
Q Consensus 126 atP~~G~~~~ 135 (272)
++|+.|+..+
T Consensus 198 a~P~~Gs~~~ 207 (440)
T PLN02733 198 AAPFQGAPGF 207 (440)
T ss_pred CCCCCCCchh
Confidence 9999999754
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.54 E-value=5.2e-07 Score=94.68 Aligned_cols=48 Identities=21% Similarity=0.017 Sum_probs=40.6
Q ss_pred HhccCCccEEEEecCCCeeecceec-cccccCCCCCCcc-cccCCCCCcccc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWED-SLDEKYPHIVHH 243 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l-~i~~~~~H~~~~ 243 (272)
.|++++.|+|+++|+.|.++|++.+ .+.. .+|++++ .+++++||+.++
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~--~i~~a~~~~~~~~~GH~g~~ 341 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRR--AAPNAEVYESLIRAGHFGLV 341 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHH--hCCCCeEEEEeCCCCCEeee
Confidence 4889999999999999999999987 4544 5899987 678999999543
No 63
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.48 E-value=9.3e-07 Score=78.86 Aligned_cols=70 Identities=24% Similarity=0.327 Sum_probs=41.6
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEE
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFIT 124 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~ 124 (272)
++..-+..|..-+..+-+ +.+++++.+|||||||+++=+++.. +..... -.++..+|+
T Consensus 81 ~~~~qa~wl~~vl~~L~~-~Y~~~~~N~VGHSmGg~~~~~yl~~-~~~~~~--------------------~P~l~K~V~ 138 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKK-KYHFKKFNLVGHSMGGLSWTYYLEN-YGNDKN--------------------LPKLNKLVT 138 (255)
T ss_dssp HHHHHHHHHHHHHHHHHH-CC--SEEEEEEETHHHHHHHHHHHH-CTTGTT--------------------S-EEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHH-hcCCCEEeEEEECccHHHHHHHHHH-hccCCC--------------------CcccceEEE
Confidence 455554445444444444 6899999999999999965344433 433210 014679999
Q ss_pred ecCCCCCCCCCC
Q 024115 125 VATPHLGSRGNK 136 (272)
Q Consensus 125 ~atP~~G~~~~~ 136 (272)
+|+|+-|.....
T Consensus 139 Ia~pfng~~~~~ 150 (255)
T PF06028_consen 139 IAGPFNGILGMN 150 (255)
T ss_dssp ES--TTTTTCCS
T ss_pred eccccCcccccc
Confidence 999999986543
No 64
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.45 E-value=3e-07 Score=77.27 Aligned_cols=63 Identities=21% Similarity=0.081 Sum_probs=48.1
Q ss_pred HHHhccCCccEEEEecCCCeeecceeccccccCCCCC-CcccccCCCCCcccccCCccCCchhhc
Q 024115 192 MSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPK-WEDSLDEKYPHIVHHEHCKACDAEQLD 255 (272)
Q Consensus 192 ~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~-a~l~i~~~~~H~~~~e~p~~v~~~~~~ 255 (272)
...+..+..|++++.|.+|.++|.... ......+++ .++.++++.||..+.|+|+.+++...+
T Consensus 214 ~~~~~~~~~P~l~i~g~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 214 RAALARITVPTLIIHGEDDPVVPAELA-RRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred chhhccCCCCeEEEecCCCCcCCHHHH-HHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 345778889999999999977776652 222224665 899999999999999999977665544
No 65
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.45 E-value=7.3e-08 Score=82.15 Aligned_cols=169 Identities=15% Similarity=0.099 Sum_probs=100.8
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEE
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFIT 124 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~ 124 (272)
+++.. .+=|++...+++ .+...++++.|+|=||..+ +..+-.+++.+. .++-
T Consensus 93 ~~~ff-~~Da~~avdLM~-aLk~~~fsvlGWSdGgiTa-livAak~~e~v~-------------------------rmii 144 (277)
T KOG2984|consen 93 EVQFF-MKDAEYAVDLME-ALKLEPFSVLGWSDGGITA-LIVAAKGKEKVN-------------------------RMII 144 (277)
T ss_pred hHHHH-HHhHHHHHHHHH-HhCCCCeeEeeecCCCeEE-EEeeccChhhhh-------------------------hhee
Confidence 56666 777888899999 7999999999999999977 444455666542 1222
Q ss_pred ecCCCCCCCCCCCcccchhhhHHHHHHHHHHHHHHhhcccchhccCCC--C-------CchhhHhhhccCCcchHHHH-H
Q 024115 125 VATPHLGSRGNKQVPFLFGVTAFEKAANFVIHLIFRRTGRHLFLNDND--E-------GRPPLLRRMVEDEDENYFMS-A 194 (272)
Q Consensus 125 ~atP~~G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~s~~~l~l~d~~--~-------~~~~~L~~l~~~~~~~d~~~-~ 194 (272)
.+.-..-..... -.+.|++ .+. +|.- .++|- +.+.- + .-.....++-.- .+.+|.. .
T Consensus 145 wga~ayvn~~~~--ma~kgiR---dv~----kWs~--r~R~P-~e~~Yg~e~f~~~wa~wvD~v~qf~~~-~dG~fCr~~ 211 (277)
T KOG2984|consen 145 WGAAAYVNHLGA--MAFKGIR---DVN----KWSA--RGRQP-YEDHYGPETFRTQWAAWVDVVDQFHSF-CDGRFCRLV 211 (277)
T ss_pred ecccceecchhH--HHHhchH---HHh----hhhh--hhcch-HHHhcCHHHHHHHHHHHHHHHHHHhhc-CCCchHhhh
Confidence 211110000000 0011111 111 1110 01111 00000 0 000112222222 2234433 5
Q ss_pred hccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhcc
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
|.++++|+|+.+|..|..++-... .|.. ..+.+++.+.+.++|-+++..++++|...+|.
T Consensus 212 lp~vkcPtli~hG~kDp~~~~~hv~fi~~--~~~~a~~~~~peGkHn~hLrya~eFnklv~dF 272 (277)
T KOG2984|consen 212 LPQVKCPTLIMHGGKDPFCGDPHVCFIPV--LKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDF 272 (277)
T ss_pred cccccCCeeEeeCCcCCCCCCCCccchhh--hcccceEEEccCCCcceeeechHHHHHHHHHH
Confidence 789999999999999999988877 6655 47999999999999999999999999876653
No 66
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.45 E-value=2e-07 Score=80.09 Aligned_cols=44 Identities=20% Similarity=-0.005 Sum_probs=33.9
Q ss_pred CCccEEEEecCCCeeecceec-ccc---ccCCCCCCcccccCCCCCccc
Q 024115 198 FKRRVAYSNACYDHIVGWRTS-SIR---RNSELPKWEDSLDEKYPHIVH 242 (272)
Q Consensus 198 f~~p~L~~~g~~D~iVP~~sa-~l~---~~~~ip~a~l~i~~~~~H~~~ 242 (272)
++.|+|+++|.+|.+||+..+ .+. .....+ .++.++++++|.+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~-~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKP-VELLIFPGEGHGFG 190 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSS-EEEEEETT-SSSTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCC-EEEEEcCcCCCCCC
Confidence 889999999999999999988 332 112344 88999999999654
No 67
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.44 E-value=2.9e-06 Score=76.18 Aligned_cols=184 Identities=15% Similarity=0.112 Sum_probs=92.1
Q ss_pred chhhhhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCC-CeEEEEEechhHHHHHHHHH
Q 024115 9 KLLHVKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNL-RKISFVAHSVGGLVARYAIG 87 (272)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~-~~i~lVGHSmGG~VaR~al~ 87 (272)
.|..+++.++..+ +.- ...-+.-..+......+++........+.+.+.+++.+.+ +-+++||+|.||+++|.++.
T Consensus 23 ~m~~i~~~i~~~~--PG~-yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq 99 (279)
T PF02089_consen 23 SMGSIKELIEEQH--PGT-YVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQ 99 (279)
T ss_dssp THHHHHHHHHHHS--TT---EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--CCc-eEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHH
Confidence 5888888887753 311 1111111111000011233222245556677777643333 57999999999999999886
Q ss_pred hhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCCcccchhhhHHHHHHHHHH-HHHHhhcccch
Q 024115 88 KLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAANFVI-HLIFRRTGRHL 166 (272)
Q Consensus 88 ~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~~~~-~~~~~~s~~~l 166 (272)
+ .+.. .+.+||++++||.|.......+.. ..++-+.++.++ ..+.....++.
T Consensus 100 ~-c~~~------------------------~V~nlISlggph~Gv~g~p~c~~~--~~~~c~~~~~~l~~~~Y~~~~Q~~ 152 (279)
T PF02089_consen 100 R-CNDP------------------------PVHNLISLGGPHMGVFGLPFCPGD--SDWFCKLMRKLLKSGAYSDWVQKH 152 (279)
T ss_dssp H--TSS-------------------------EEEEEEES--TT-BSS-TCHCST--CHHHHHHHHHHHHHHHTSHHHHCC
T ss_pred H-CCCC------------------------CceeEEEecCcccccccCCccccc--cchHHHHHHHHHhhccchhhhhce
Confidence 6 4432 257999999999999753222100 011112221111 11222222211
Q ss_pred -----hccCCCC-----CchhhHhhhccC-CcchHHHHHhccCCccEEEEecCCCeeecceeccccc
Q 024115 167 -----FLNDNDE-----GRPPLLRRMVED-EDENYFMSALCAFKRRVAYSNACYDHIVGWRTSSIRR 222 (272)
Q Consensus 167 -----~l~d~~~-----~~~~~L~~l~~~-~~~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~ 222 (272)
..+|+.. ..+.+|..+... ..+..+++.|.+.+.-+|+.--++..++|++|+.+..
T Consensus 153 ~v~AqYwrDP~~~~~Yl~~s~FLadiNNE~~~n~tyk~nl~~L~~~Vlv~f~~D~~v~P~eSs~Fg~ 219 (279)
T PF02089_consen 153 LVQAQYWRDPHHEDKYLEYSIFLADINNERPVNETYKENLLKLEKFVLVGFPDDTVVVPKESSWFGF 219 (279)
T ss_dssp TCHGGGB--STTHHHHHHH-SSHHHHTTSSS-HHHHHHHHCTSSEEEEEEETT-SSSSSGGGGGT-E
T ss_pred EeehhhccCCCcHHHHHHccchhhhhcCCcccchHHHHHHHHhhheeEEecCCCcEEecCccccccc
Confidence 1223211 113456767643 2345689999999999998874444457999996654
No 68
>PLN02606 palmitoyl-protein thioesterase
Probab=98.42 E-value=3.8e-06 Score=76.18 Aligned_cols=125 Identities=20% Similarity=0.255 Sum_probs=76.5
Q ss_pred CeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCC-cccchhhhH
Q 024115 68 RKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQ-VPFLFGVTA 146 (272)
Q Consensus 68 ~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~-~p~~~g~~~ 146 (272)
+-+++||+|.||+++|.++.+ .|.. ..+.+||++++||.|...-.. .+ . +
T Consensus 95 ~G~naIGfSQGglflRa~ier-c~~~-----------------------p~V~nlISlggph~Gv~g~p~~C~---~--~ 145 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEF-CDNA-----------------------PPVINYVSLGGPHAGVAAIPKGCN---S--T 145 (306)
T ss_pred CceEEEEEcchhHHHHHHHHH-CCCC-----------------------CCcceEEEecCCcCCcccCcccch---h--h
Confidence 469999999999999998876 4431 025699999999999875221 11 1 1
Q ss_pred HHHHHHHHHHHHHhh-cccch----hccCCCC-----CchhhHhhhccCCc---chHHHHHhccCCccEEEEecCCCe-e
Q 024115 147 FEKAANFVIHLIFRR-TGRHL----FLNDNDE-----GRPPLLRRMVEDED---ENYFMSALCAFKRRVAYSNACYDH-I 212 (272)
Q Consensus 147 ~~~~~~~~~~~~~~~-s~~~l----~l~d~~~-----~~~~~L~~l~~~~~---~~d~~~~L~~f~~p~L~~~g~~D~-i 212 (272)
+-+.+..+.....+. ..+.+ ...|+.. ..+.+|..+....+ +..+++.|.+.++-+||.- .+|. +
T Consensus 146 ~C~~~~~l~~~~Ys~~vQ~~lv~AqYwrDP~~~~~Yl~~s~FLadINNEr~~~~n~tYk~n~~~L~~~Vlv~f-~~DtvV 224 (306)
T PLN02606 146 FCELLKAVFAVIYTDFAQDHTAPSGYVKKPMEIKNYLEHSKYLPKLNNERPGERNPTFKDRFTSLHNLVLVMF-QGDTVL 224 (306)
T ss_pred HhHHHHHHHHhhhHHHHhccEeccccccCcchHHHHHHhCcchhhhcCcCcccccHHHHHHHHHhhceEEEEe-CCCceE
Confidence 111222222112222 11121 1222211 12466787775533 4679999999999999887 5565 5
Q ss_pred ecceeccccc
Q 024115 213 VGWRTSSIRR 222 (272)
Q Consensus 213 VP~~sa~l~~ 222 (272)
+|++||.+.-
T Consensus 225 ~PkeSswFg~ 234 (306)
T PLN02606 225 IPRETSWFGY 234 (306)
T ss_pred CCCcccccee
Confidence 6999996653
No 69
>PLN02872 triacylglycerol lipase
Probab=98.29 E-value=1.3e-06 Score=82.78 Aligned_cols=63 Identities=16% Similarity=0.078 Sum_probs=49.4
Q ss_pred HhccC--CccEEEEecCCCeeecceec-cccccCCCCC-CcccccCCCCCc---ccccCCccCCchhhcccc
Q 024115 194 ALCAF--KRRVAYSNACYDHIVGWRTS-SIRRNSELPK-WEDSLDEKYPHI---VHHEHCKACDAEQLDISS 258 (272)
Q Consensus 194 ~L~~f--~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~-a~l~i~~~~~H~---~~~e~p~~v~~~~~~~~~ 258 (272)
.|+++ +.|+++..|.+|.+|+++.+ .+.. .+|+ .+++.+++++|+ ...|.|+.++++.++.+.
T Consensus 318 ~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~--~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~ 387 (395)
T PLN02872 318 DLSLIPKSLPLWMGYGGTDGLADVTDVEHTLA--ELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFR 387 (395)
T ss_pred CcccCCCCccEEEEEcCCCCCCCHHHHHHHHH--HCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHH
Confidence 46677 57999999999999988876 3333 4565 678889999995 466999999988887664
No 70
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.26 E-value=1.8e-06 Score=81.62 Aligned_cols=65 Identities=32% Similarity=0.403 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCC
Q 024115 49 MGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATP 128 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP 128 (272)
...+|.+.|++..+ .. -++|+||||||||+++|+.|.....+.. ....+..+|++++|
T Consensus 102 ~~~~lk~~ie~~~~-~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W--------------------~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 102 YFTKLKQLIEEAYK-KN-GKKVVLIAHSMGGLVARYFLQWMPQEEW--------------------KDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHHHHHHHHH-hc-CCcEEEEEeCCCchHHHHHHHhccchhh--------------------HHhhhhEEEEeCCC
Confidence 33455555555544 23 6899999999999999998876322211 11235799999999
Q ss_pred CCCCCCC
Q 024115 129 HLGSRGN 135 (272)
Q Consensus 129 ~~G~~~~ 135 (272)
+.|+..+
T Consensus 160 ~~Gs~~a 166 (389)
T PF02450_consen 160 FGGSPKA 166 (389)
T ss_pred CCCChHH
Confidence 9999754
No 71
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.18 E-value=2.9e-06 Score=78.67 Aligned_cols=67 Identities=33% Similarity=0.528 Sum_probs=54.8
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEE
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFIT 124 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~ 124 (272)
.....++++...|.+.+. ..+.+++.+|||||||.++||++.. .+.. ..++.+++
T Consensus 105 ~~~~~~~ql~~~V~~~l~-~~ga~~v~LigHS~GG~~~ry~~~~-~~~~-----------------------~~V~~~~t 159 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLA-KTGAKKVNLIGHSMGGLDSRYYLGV-LGGA-----------------------NRVASVVT 159 (336)
T ss_pred cccccHHHHHHHHHHHHh-hcCCCceEEEeecccchhhHHHHhh-cCcc-----------------------ceEEEEEE
Confidence 345567999999999999 7888999999999999999987765 4421 13568999
Q ss_pred ecCCCCCCCCCC
Q 024115 125 VATPHLGSRGNK 136 (272)
Q Consensus 125 ~atP~~G~~~~~ 136 (272)
+++||.|+....
T Consensus 160 l~tp~~Gt~~~~ 171 (336)
T COG1075 160 LGTPHHGTELAD 171 (336)
T ss_pred eccCCCCchhhh
Confidence 999999998754
No 72
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.17 E-value=3.6e-06 Score=73.49 Aligned_cols=154 Identities=16% Similarity=0.111 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCC
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHL 130 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~ 130 (272)
.++++.|.++++ ..+. +|.+|||||||.++||++... .... . . ...+-.....+..|+.++.|++
T Consensus 60 ~~l~~fI~~Vl~-~TGa-kVDIVgHS~G~~iaR~yi~~~--~~~d-----~---~---~~lg~~~~~~v~t~v~lag~n~ 124 (219)
T PF01674_consen 60 KQLRAFIDAVLA-YTGA-KVDIVGHSMGGTIARYYIKGG--GGAD-----K---V---VNLGPPLTSKVGTFVGLAGANH 124 (219)
T ss_dssp HHHHHHHHHHHH-HHT---EEEEEETCHHHHHHHHHHHC--TGGG-----T---E---EE----GGG-EEEEEEES--TT
T ss_pred HHHHHHHHHHHH-hhCC-EEEEEEcCCcCHHHHHHHHHc--CCCC-----c---c---cCcccccccccccccccccccc
Confidence 688888888888 7898 999999999999999999653 2110 0 0 0001111234678999999999
Q ss_pred CCCCCCCcccchhhhHHHHHHHHHHHHHHhhcccchhccCCCCCchhhHhhhccCCcchHHHHHhccCCccEEEEecCCC
Q 024115 131 GSRGNKQVPFLFGVTAFEKAANFVIHLIFRRTGRHLFLNDNDEGRPPLLRRMVEDEDENYFMSALCAFKRRVAYSNACYD 210 (272)
Q Consensus 131 G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~s~~~l~l~d~~~~~~~~L~~l~~~~~~~d~~~~L~~f~~p~L~~~g~~D 210 (272)
|......... . +.. ... ...++ . ..+++|..|.+.. +.. ..++-+ +..+.|
T Consensus 125 G~~~~~~~~~-~----~~~--------~C~-~~~g~---~---~gS~FL~~LN~~~---~t~----g~~yt~--I~S~~D 175 (219)
T PF01674_consen 125 GLTSCGLGDA-P----FFP--------ACN-ACNGL---Y---CGSSFLTDLNSGG---ETE----GVDYTS--IWSRYD 175 (219)
T ss_dssp --CGHC--------------------------------------------------------------------------
T ss_pred cccccccccc-c----ccc--------ccc-ccccc---c---ccccccccccccc---ccc----cccccc--cccccc
Confidence 9875332100 0 000 000 00111 0 1357888887642 111 222333 344689
Q ss_pred eeecceec-cccccCCCCCCcccc-cCCCCCcccccCCcc
Q 024115 211 HIVGWRTS-SIRRNSELPKWEDSL-DEKYPHIVHHEHCKA 248 (272)
Q Consensus 211 ~iVP~~sa-~l~~~~~ip~a~l~i-~~~~~H~~~~e~p~~ 248 (272)
.+|.+... .-.....+|...... ++..+|.-....|-+
T Consensus 176 evV~~~~~~~g~~~s~i~~~~~~~~~d~~~H~~~~~~t~~ 215 (219)
T PF01674_consen 176 EVVTYTNLVCGKPTSNIPGQQGCCPYDFLGHFQVKYDTVE 215 (219)
T ss_dssp ----------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccc
Confidence 98873333 333444677776666 788888776665544
No 73
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.15 E-value=5.3e-06 Score=65.90 Aligned_cols=42 Identities=14% Similarity=0.025 Sum_probs=30.5
Q ss_pred cCCccEEEEecCCCeeecceec-cccccCCC-CCCcccccCCCCCc
Q 024115 197 AFKRRVAYSNACYDHIVGWRTS-SIRRNSEL-PKWEDSLDEKYPHI 240 (272)
Q Consensus 197 ~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~i-p~a~l~i~~~~~H~ 240 (272)
+.+.|+++++|.+|.++|++.+ .+... + ...++.++++++|.
T Consensus 102 ~~~~pv~~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 102 KIRIPVLFIHGENDPLVPPEQVRRLYEA--LPGPKELYIIPGAGHF 145 (145)
T ss_dssp TTTSEEEEEEETT-SSSHHHHHHHHHHH--HCSSEEEEEETTS-TT
T ss_pred ccCCcEEEEEECCCCcCCHHHHHHHHHH--cCCCcEEEEeCCCcCc
Confidence 3445999999999999999877 43332 3 45789999999994
No 74
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.09 E-value=3.4e-05 Score=68.47 Aligned_cols=141 Identities=20% Similarity=0.207 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHhcC-CCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCC
Q 024115 51 ERLAQEVLEVIERKRN-LRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPH 129 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~-~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~ 129 (272)
.+.++.+.+.+..... -+-+++||.|.||+|+|..+...-.. .+.+||++++||
T Consensus 74 ~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~p-------------------------pV~n~ISL~gPh 128 (296)
T KOG2541|consen 74 WEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNP-------------------------PVKNFISLGGPH 128 (296)
T ss_pred HHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCC-------------------------CcceeEeccCCc
Confidence 4455555555552222 25799999999999999877663332 246999999999
Q ss_pred CCCCCCCCcccchhhhHHHHHHHHHH-HHHHhhcccc-h----hccCCC-----CCchhhHhhhccCCc---chHHHHHh
Q 024115 130 LGSRGNKQVPFLFGVTAFEKAANFVI-HLIFRRTGRH-L----FLNDND-----EGRPPLLRRMVEDED---ENYFMSAL 195 (272)
Q Consensus 130 ~G~~~~~~~p~~~g~~~~~~~~~~~~-~~~~~~s~~~-l----~l~d~~-----~~~~~~L~~l~~~~~---~~d~~~~L 195 (272)
.|.... |...++ .+-.+++.+. ....+..+++ + ...++. ...+.+|..++...+ ++-+++.+
T Consensus 129 aG~~~~---p~c~~~-l~c~~~~~~l~~~~Ys~~vQ~h~a~sgY~~~P~~~d~Yl~~s~fLp~iNnEr~~~nntt~k~~f 204 (296)
T KOG2541|consen 129 AGIYGI---PRCLKW-LFCDLMRSNLKLGIYSDFVQDHLAPSGYWHDPHQIDLYLEHSKFLPKINNERPHENNTTYKDNF 204 (296)
T ss_pred CCccCC---CCCCch-hhhHHHHHhhcccccchHHHhcccccccccCchHHHHHHhhchhhhhhcCCCCCccccHHHHHh
Confidence 998753 222221 1222222211 1122222211 1 111211 012456777765432 45688888
Q ss_pred ccCCccEEEEecCCCe-eecceecccc
Q 024115 196 CAFKRRVAYSNACYDH-IVGWRTSSIR 221 (272)
Q Consensus 196 ~~f~~p~L~~~g~~D~-iVP~~sa~l~ 221 (272)
.+.++-+||.- .+|. ++|++||.+.
T Consensus 205 ~~L~nLVlV~f-~~D~vi~P~~SSwFG 230 (296)
T KOG2541|consen 205 LSLGNLVLVGF-ENDTVITPKQSSWFG 230 (296)
T ss_pred hhhccEEEEec-CCCCEeccCccccee
Confidence 89999888776 5555 5799999553
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=98.08 E-value=1.9e-05 Score=71.26 Aligned_cols=48 Identities=10% Similarity=0.134 Sum_probs=33.7
Q ss_pred HhccCCccEEEEecCCCeeeccee-c-ccc---ccCCCCCCcccccCCCCCccc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRT-S-SIR---RNSELPKWEDSLDEKYPHIVH 242 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~s-a-~l~---~~~~ip~a~l~i~~~~~H~~~ 242 (272)
.+...+.|+++++|.+|.+||... + .+. .....+ .++.++++.+|..+
T Consensus 212 ~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~-~~~~~~pg~~H~~~ 264 (283)
T PLN02442 212 KFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAP-VTLRLQPGYDHSYF 264 (283)
T ss_pred hccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCC-eEEEEeCCCCccHH
Confidence 344567899999999999999732 2 221 111333 77899999999866
No 76
>PRK11460 putative hydrolase; Provisional
Probab=98.01 E-value=1.1e-05 Score=70.86 Aligned_cols=51 Identities=8% Similarity=0.058 Sum_probs=36.8
Q ss_pred CccEEEEecCCCeeecceec-ccccc-CCC-CCCcccccCCCCCcccccCCccC
Q 024115 199 KRRVAYSNACYDHIVGWRTS-SIRRN-SEL-PKWEDSLDEKYPHIVHHEHCKAC 249 (272)
Q Consensus 199 ~~p~L~~~g~~D~iVP~~sa-~l~~~-~~i-p~a~l~i~~~~~H~~~~e~p~~v 249 (272)
+.|+++++|.+|.+||++.+ .+... +.. ...+..+|++++|.+..+..+.+
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~ 201 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFA 201 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHH
Confidence 56999999999999999987 22221 011 23567889999999986655554
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.98 E-value=4.4e-05 Score=68.52 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHh--cCCCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 51 ERLAQEVLEVIERK--RNLRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 51 ~~lA~~v~~ll~~~--~~~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
+.++++|..++++. .+.+++.++||||||+++ +.++..+|+.+
T Consensus 119 ~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a-~~~a~~~p~~~ 163 (275)
T TIGR02821 119 SYIVQELPALVAAQFPLDGERQGITGHSMGGHGA-LVIALKNPDRF 163 (275)
T ss_pred HHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHH-HHHHHhCcccc
Confidence 56678888888853 355789999999999999 76777788754
No 78
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.95 E-value=1.1e-05 Score=70.90 Aligned_cols=59 Identities=10% Similarity=-0.009 Sum_probs=43.6
Q ss_pred ccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCccCCchhhcc
Q 024115 196 CAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKACDAEQLDI 256 (272)
Q Consensus 196 ~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~v~~~~~~~ 256 (272)
..+.+|+.+.+|.+|..|..+.. ..+.+ .=...++.+++|. |....++.+++.....+.
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~-t~~~f~l~~fdGg-HFfl~~~~~~v~~~i~~~ 232 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREH-TKGDFTLRVFDGG-HFFLNQQREEVLARLEQH 232 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHh-hcCCceEEEecCc-ceehhhhHHHHHHHHHHH
Confidence 36788999999999999988876 35543 1235677888765 999999988776655443
No 79
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=97.94 E-value=2.5e-05 Score=67.46 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=41.0
Q ss_pred HHHHHhccC--CccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCccc
Q 024115 190 YFMSALCAF--KRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVH 242 (272)
Q Consensus 190 d~~~~L~~f--~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~ 242 (272)
|..++..+| ++|+|-.+|..|.+||.+.| .++. .+|+=+|.++||+-|-..
T Consensus 188 d~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk--~i~nH~L~iIEgADHnyt 241 (269)
T KOG4667|consen 188 DIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAK--IIPNHKLEIIEGADHNYT 241 (269)
T ss_pred hhhhhhcCcCccCceEEEeccCCceeechhHHHHHH--hccCCceEEecCCCcCcc
Confidence 444444444 67999999999999999998 5554 699999999999999874
No 80
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.90 E-value=1.2e-05 Score=69.38 Aligned_cols=47 Identities=13% Similarity=0.024 Sum_probs=30.0
Q ss_pred CccEEEEecCCCeeecceecc-----ccccCCCCCCcccccCCCCCcccccCCc
Q 024115 199 KRRVAYSNACYDHIVGWRTSS-----IRRNSELPKWEDSLDEKYPHIVHHEHCK 247 (272)
Q Consensus 199 ~~p~L~~~g~~D~iVP~~sa~-----l~~~~~ip~a~l~i~~~~~H~~~~e~p~ 247 (272)
+.|+++++|.+|.+||++.+. +.. .-.+.+...|++.||-+..+.-.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~--~~~~v~~~~~~g~gH~i~~~~~~ 206 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA--AGANVEFHEYPGGGHEISPEELR 206 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC--TT-GEEEEEETT-SSS--HHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh--cCCCEEEEEcCCCCCCCCHHHHH
Confidence 569999999999999988661 122 22367788999999988754433
No 81
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.87 E-value=0.00017 Score=72.18 Aligned_cols=84 Identities=23% Similarity=0.290 Sum_probs=56.7
Q ss_pred eEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHh----cC--------CCeEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 28 WIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERK----RN--------LRKISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 28 ~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~----~~--------~~~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
.+.|..-+-|+...-.+|-- + .+-++.|.+.|... .+ .+.|++|||||||.|||..+.. +..+.
T Consensus 132 ~~DFFaVDFnEe~tAm~G~~-l-~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl--kn~~~ 207 (973)
T KOG3724|consen 132 SFDFFAVDFNEEFTAMHGHI-L-LDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL--KNEVQ 207 (973)
T ss_pred ccceEEEcccchhhhhccHh-H-HHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh--hhhcc
Confidence 46788888888866667733 3 55566655555410 11 3569999999999999887644 43222
Q ss_pred CCCCCCccccccccccccccccccceeEEecCCCCCCCCCC
Q 024115 96 ENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNK 136 (272)
Q Consensus 96 ~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~ 136 (272)
+ -++.++|+++||.-.+.+.
T Consensus 208 ----------------~-----sVntIITlssPH~a~Pl~~ 227 (973)
T KOG3724|consen 208 ----------------G-----SVNTIITLSSPHAAPPLPL 227 (973)
T ss_pred ----------------c-----hhhhhhhhcCcccCCCCCC
Confidence 1 2568999999999776543
No 82
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.84 E-value=5.6e-05 Score=67.91 Aligned_cols=70 Identities=10% Similarity=0.066 Sum_probs=43.5
Q ss_pred hhhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHH---HHHHhcCCCeEEEEEechhHHHHHHHHHh
Q 024115 12 HVKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLE---VIERKRNLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~---ll~~~~~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
.+.+++|.++.+|-+ +++.|.... +..+.+ ...+|+.. .++ ..+..+++++||||||.++ ..++.
T Consensus 51 ~La~~Gy~Vl~~Dl~---G~G~S~g~~---~~~~~~----~~~~Dv~~ai~~L~-~~~~~~v~LvG~SmGG~vA-l~~A~ 118 (266)
T TIGR03101 51 AFAAGGFGVLQIDLY---GCGDSAGDF---AAARWD----VWKEDVAAAYRWLI-EQGHPPVTLWGLRLGALLA-LDAAN 118 (266)
T ss_pred HHHHCCCEEEEECCC---CCCCCCCcc---ccCCHH----HHHHHHHHHHHHHH-hcCCCCEEEEEECHHHHHH-HHHHH
Confidence 444567888888855 566664221 122333 33344433 445 3577899999999999999 55555
Q ss_pred hcCCC
Q 024115 89 LYRPP 93 (272)
Q Consensus 89 l~~~~ 93 (272)
.+|+.
T Consensus 119 ~~p~~ 123 (266)
T TIGR03101 119 PLAAK 123 (266)
T ss_pred hCccc
Confidence 56654
No 83
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00018 Score=66.72 Aligned_cols=63 Identities=16% Similarity=0.053 Sum_probs=49.5
Q ss_pred hHHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCc-cccc-CCCCCcccccCCccCCchh
Q 024115 189 NYFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWE-DSLD-EKYPHIVHHEHCKACDAEQ 253 (272)
Q Consensus 189 ~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~-l~i~-~~~~H~~~~e~p~~v~~~~ 253 (272)
.+..++|++++.|+|++....|.+.|++.. .+.. .++.+. +.++ ..+||-.++...+.+.+..
T Consensus 296 ~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~--~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i 361 (368)
T COG2021 296 GDLTAALARIKAPVLVVGITSDWLFPPELQRALAE--ALPAAGALREIDSPYGHDAFLVESEAVGPLI 361 (368)
T ss_pred CcHHHHHhcCccCEEEEEecccccCCHHHHHHHHH--hccccCceEEecCCCCchhhhcchhhhhHHH
Confidence 367888999999999999999999999987 5554 366655 6555 5889999888777775544
No 84
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.74 E-value=0.00014 Score=59.41 Aligned_cols=66 Identities=24% Similarity=0.214 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHhc---CCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCcccccccccccccccccccee
Q 024115 46 VDVMGERLAQEVLEVIERKR---NLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINF 122 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~---~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 122 (272)
....+..+.+++...+++.. ...+++++||||||.+|.++. ....... ......+
T Consensus 3 f~~~~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a-~~~~~~~---------------------~~~~~~~ 60 (153)
T cd00741 3 FYKAARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAG-LDLRGRG---------------------LGRLVRV 60 (153)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHH-HHHHhcc---------------------CCCceEE
Confidence 33445677777777776432 568999999999999995544 4343321 0113478
Q ss_pred EEecCCCCCCC
Q 024115 123 ITVATPHLGSR 133 (272)
Q Consensus 123 v~~atP~~G~~ 133 (272)
+++++|..|..
T Consensus 61 ~~fg~p~~~~~ 71 (153)
T cd00741 61 YTFGPPRVGNA 71 (153)
T ss_pred EEeCCCcccch
Confidence 99999998764
No 85
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.66 E-value=4.9e-05 Score=65.96 Aligned_cols=50 Identities=12% Similarity=0.048 Sum_probs=28.7
Q ss_pred HhccCCccEEEEecCCCeeecceeccc------cccCCCC-CCcccccCCCCCccccc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTSSI------RRNSELP-KWEDSLDEKYPHIVHHE 244 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa~l------~~~~~ip-~a~l~i~~~~~H~~~~e 244 (272)
.+.+++.|+|+++|.+|.+.|....+. ..+ .-+ ..++..|+++||++..-
T Consensus 110 pvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~-~~~~~~~~l~Y~~aGH~i~~P 166 (213)
T PF08840_consen 110 PVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAA-GFPHNVEHLSYPGAGHLIEPP 166 (213)
T ss_dssp -GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCT-T-----EEEEETTB-S---ST
T ss_pred cHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHh-CCCCcceEEEcCCCCceecCC
Confidence 477899999999999999998776631 122 334 57889999999998543
No 86
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.63 E-value=0.00072 Score=66.39 Aligned_cols=54 Identities=17% Similarity=0.017 Sum_probs=39.2
Q ss_pred HHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCcc
Q 024115 193 SALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCKA 248 (272)
Q Consensus 193 ~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~~ 248 (272)
-.|+++++|++++.+..|.|||++++ .+.. .+.+..-.+.-..||+.=+=.|..
T Consensus 435 idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~--l~gs~~~fvl~~gGHIggivnpP~ 489 (560)
T TIGR01839 435 IDLKKVKCDSFSVAGTNDHITPWDAVYRSAL--LLGGKRRFVLSNSGHIQSILNPPG 489 (560)
T ss_pred echhcCCCCeEEEecCcCCcCCHHHHHHHHH--HcCCCeEEEecCCCccccccCCCC
Confidence 36889999999999999999999998 3332 354444455567788875544443
No 87
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.62 E-value=0.00011 Score=70.31 Aligned_cols=73 Identities=14% Similarity=0.073 Sum_probs=42.6
Q ss_pred hhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHH-hcCCCeEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 17 QYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIER-KRNLRKISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~-~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
.++++++|-+ ++..+. ...........|+.+|+-|..+.+. ..++++++||||||||.|| ..++..++.++.
T Consensus 73 d~nVI~VDw~---g~g~s~---y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIA-g~ag~~~p~rV~ 145 (442)
T TIGR03230 73 SANVIVVDWL---SRAQQH---YPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVA-GIAGSLTKHKVN 145 (442)
T ss_pred CCEEEEEECC---CcCCCC---CccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHH-HHHHHhCCccee
Confidence 3566677632 444332 1112223344555555555544431 1257899999999999999 556676776654
Q ss_pred C
Q 024115 96 E 96 (272)
Q Consensus 96 ~ 96 (272)
+
T Consensus 146 r 146 (442)
T TIGR03230 146 R 146 (442)
T ss_pred E
Confidence 3
No 88
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.61 E-value=0.00027 Score=65.35 Aligned_cols=64 Identities=19% Similarity=0.100 Sum_probs=47.0
Q ss_pred HHHHHhccCCcc-----EEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcc-cccCCccCCchhhcc
Q 024115 190 YFMSALCAFKRR-----VAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIV-HHEHCKACDAEQLDI 256 (272)
Q Consensus 190 d~~~~L~~f~~p-----~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~-~~e~p~~v~~~~~~~ 256 (272)
|....+..|.+| +.++.+++|.+||..+. .+.. .-|+++...+++ ||+. ++-+.+.+.+...|+
T Consensus 275 d~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~--~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Da 345 (348)
T PF09752_consen 275 DSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQE--IWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDA 345 (348)
T ss_pred HhhccccccCCCCCCCcEEEEEecCceEechhhcchHHH--hCCCCeEEEecC-CcEEEeeechHHHHHHHHHH
Confidence 344456777665 56667799999998876 4444 579999999988 9997 677777776666654
No 89
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.61 E-value=0.00038 Score=59.83 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=21.7
Q ss_pred CCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 67 LRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 67 ~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
.+++.++||||||.++ +.++..+|+.+
T Consensus 94 ~~~i~l~G~S~Gg~~a-~~~a~~~p~~~ 120 (212)
T TIGR01840 94 PNRVYVTGLSAGGGMT-AVLGCTYPDVF 120 (212)
T ss_pred hhheEEEEECHHHHHH-HHHHHhCchhh
Confidence 3589999999999998 66666677654
No 90
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.53 E-value=0.00035 Score=64.00 Aligned_cols=54 Identities=15% Similarity=-0.011 Sum_probs=43.2
Q ss_pred HHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccC
Q 024115 192 MSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEH 245 (272)
Q Consensus 192 ~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~ 245 (272)
+..|.+|.+|+|++|..+|.++|.+.-.......-|+..+.+-+.+||+.++..
T Consensus 267 ~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~ 320 (345)
T COG0429 267 LPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGG 320 (345)
T ss_pred cccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccC
Confidence 346789999999999999999988665333322458888999999999999984
No 91
>PLN00021 chlorophyllase
Probab=97.52 E-value=0.00032 Score=64.47 Aligned_cols=48 Identities=6% Similarity=-0.069 Sum_probs=30.6
Q ss_pred CCccEEEEecCCC-----eeec----ceecc--ccccCCCCCCcccccCCCCCcccccCC
Q 024115 198 FKRRVAYSNACYD-----HIVG----WRTSS--IRRNSELPKWEDSLDEKYPHIVHHEHC 246 (272)
Q Consensus 198 f~~p~L~~~g~~D-----~iVP----~~sa~--l~~~~~ip~a~l~i~~~~~H~~~~e~p 246 (272)
+..|+|++.+..| .++| ..... +-.. .=+...+.+.+++||+-.+|..
T Consensus 188 ~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~-~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 188 LDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNE-CKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CCCCeEEEecCCCcccccccccccCCCCCCHHHHHHh-cCCCeeeeeecCCCcceeecCC
Confidence 6789999887654 3445 22221 1111 1246778899999999987665
No 92
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.47 E-value=0.00047 Score=54.91 Aligned_cols=63 Identities=22% Similarity=0.337 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCC
Q 024115 49 MGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATP 128 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP 128 (272)
..+.+.++|.++++ .....++++.||||||.+|-++...+...... .......+++++|
T Consensus 46 ~~~~~~~~l~~~~~-~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~--------------------~~~~~~~~~fg~P 104 (140)
T PF01764_consen 46 LYDQILDALKELVE-KYPDYSIVITGHSLGGALASLAAADLASHGPS--------------------SSSNVKCYTFGAP 104 (140)
T ss_dssp HHHHHHHHHHHHHH-HSTTSEEEEEEETHHHHHHHHHHHHHHHCTTT--------------------STTTEEEEEES-S
T ss_pred HHHHHHHHHHHHHh-cccCccchhhccchHHHHHHHHHHhhhhcccc--------------------cccceeeeecCCc
Confidence 33566777777776 44458999999999999984444332222110 0112377889998
Q ss_pred CCCC
Q 024115 129 HLGS 132 (272)
Q Consensus 129 ~~G~ 132 (272)
..|.
T Consensus 105 ~~~~ 108 (140)
T PF01764_consen 105 RVGN 108 (140)
T ss_dssp --BE
T ss_pred cccC
Confidence 8865
No 93
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.43 E-value=0.00011 Score=65.71 Aligned_cols=55 Identities=24% Similarity=0.287 Sum_probs=37.3
Q ss_pred hhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhc--CCCeEEEEEechhHHHH
Q 024115 19 WCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKR--NLRKISFVAHSVGGLVA 82 (272)
Q Consensus 19 ~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~--~~~~i~lVGHSmGG~Va 82 (272)
+|.++|-| +|+-+. --+.-+.-.|++++|+..++++-. ...+|.+|||||||-||
T Consensus 104 r~~a~DlR---gHGeTk------~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIa 160 (343)
T KOG2564|consen 104 RCLALDLR---GHGETK------VENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIA 160 (343)
T ss_pred eEEEeecc---ccCccc------cCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhh
Confidence 44566655 454443 122233445888999999888533 35789999999999998
No 94
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.30 E-value=0.00046 Score=62.20 Aligned_cols=45 Identities=24% Similarity=0.300 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHh--cCCCeEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 49 MGERLAQEVLEVIERK--RNLRKISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~--~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
.++.+++.|..+.+ . .+.+++++|||||||.|+ ..+++.++.++.
T Consensus 92 v~~~la~~l~~L~~-~~g~~~~~i~lIGhSlGa~vA-g~~a~~~~~~v~ 138 (275)
T cd00707 92 VGAELAKFLDFLVD-NTGLSLENVHLIGHSLGAHVA-GFAGKRLNGKLG 138 (275)
T ss_pred HHHHHHHHHHHHHH-hcCCChHHEEEEEecHHHHHH-HHHHHHhcCccc
Confidence 34455555555544 3 356799999999999999 556666776654
No 95
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.29 E-value=0.00046 Score=65.78 Aligned_cols=101 Identities=16% Similarity=0.174 Sum_probs=57.1
Q ss_pred hhhhhhhhhh--ccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHH---hcCCCeEEEEEechhHHHHHHHH
Q 024115 12 HVKLVQYWCL--SFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIER---KRNLRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 12 ~~~~~~~~~~--~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~---~~~~~~i~lVGHSmGG~VaR~al 86 (272)
|..+.++.+. |+.|. .-.+..+ .-+.+++...+.. +++-.+++..|+. ..+-+||++|+|||||++.+|-+
T Consensus 125 ~w~~~i~~lv~~GYe~~-~~l~ga~--YDwRls~~~~e~r-d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERG-KTLFGAP--YDWRLSYHNSEER-DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHhhCcccC-ceeeccc--cchhhccCChhHH-HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4445555555 55533 3234333 2344544444433 4555555555442 34569999999999999997776
Q ss_pred HhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCC
Q 024115 87 GKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRG 134 (272)
Q Consensus 87 ~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~ 134 (272)
.. ++.... .. .......|+.++.|.+|+..
T Consensus 201 ~w-~~~~~~----------------~W-~~k~I~sfvnig~p~lG~~k 230 (473)
T KOG2369|consen 201 KW-VEAEGP----------------AW-CDKYIKSFVNIGAPWLGSPK 230 (473)
T ss_pred hc-ccccch----------------hH-HHHHHHHHHccCchhcCChH
Confidence 54 554210 01 11234577888888887754
No 96
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=97.24 E-value=0.0019 Score=61.01 Aligned_cols=56 Identities=16% Similarity=-0.009 Sum_probs=44.2
Q ss_pred HHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccCC
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEHC 246 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~p 246 (272)
....+.++++|+|++|..+|.++|.+.=.+.....=|+.-+.+-..+||+..+|.-
T Consensus 314 s~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~ 369 (409)
T KOG1838|consen 314 SSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGL 369 (409)
T ss_pred hhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccC
Confidence 44567899999999999999999997544433334467778888899999999883
No 97
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.18 E-value=0.0012 Score=64.57 Aligned_cols=56 Identities=32% Similarity=0.417 Sum_probs=39.0
Q ss_pred CCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCCCCCCCCC
Q 024115 67 LRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHLGSRGNKQ 137 (272)
Q Consensus 67 ~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~G~~~~~~ 137 (272)
-++|..|||||||+.++..+..-+..... +..+- -......+++++||.|++.+.+
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP--------~ms~l-------~kNtrGiiFls~PHrGS~lA~~ 580 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKP--------DMSNL-------NKNTRGIIFLSVPHRGSRLAGW 580 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCc--------hhhhh-------hccCCceEEEecCCCCCccccc
Confidence 57899999999999999888765532110 00010 1124468999999999998765
No 98
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.17 E-value=0.0019 Score=57.20 Aligned_cols=54 Identities=26% Similarity=0.469 Sum_probs=37.1
Q ss_pred HHHHHHHHHhcCCCeEEEEEechhHH-HHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCC
Q 024115 55 QEVLEVIERKRNLRKISFVAHSVGGL-VARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHL 130 (272)
Q Consensus 55 ~~v~~ll~~~~~~~~i~lVGHSmGG~-VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~ 130 (272)
+.+...|+++.++.++.+|||||||+ +++|++ . |..... -. .+..+|.++.|+.
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~-~-yg~dks---------------~P-----~lnK~V~l~gpfN 177 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMI-D-YGDDKS---------------LP-----PLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHH-H-hcCCCC---------------Cc-----chhheEEeccccc
Confidence 34444455588999999999999999 775544 3 332210 01 2468999999998
No 99
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.16 E-value=0.0019 Score=54.17 Aligned_cols=41 Identities=10% Similarity=-0.121 Sum_probs=31.6
Q ss_pred ccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccc
Q 024115 200 RRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHH 243 (272)
Q Consensus 200 ~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~ 243 (272)
.|.+++.-++|.+|+++-+ .++. .=++.++....+||+--.
T Consensus 118 fps~vvaSrnDp~~~~~~a~~~a~---~wgs~lv~~g~~GHiN~~ 159 (181)
T COG3545 118 FPSVVVASRNDPYVSYEHAEDLAN---AWGSALVDVGEGGHINAE 159 (181)
T ss_pred CceeEEEecCCCCCCHHHHHHHHH---hccHhheecccccccchh
Confidence 4666666699999999988 6665 357789999999997543
No 100
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.10 E-value=0.00025 Score=59.51 Aligned_cols=41 Identities=10% Similarity=-0.083 Sum_probs=29.1
Q ss_pred cEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCccccc
Q 024115 201 RVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHE 244 (272)
Q Consensus 201 p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e 244 (272)
+.+++..++|.+||++.| .++.. =++++++++++||....+
T Consensus 116 ~~~viaS~nDp~vp~~~a~~~A~~---l~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 116 PSIVIASDNDPYVPFERAQRLAQR---LGAELIILGGGGHFNAAS 157 (171)
T ss_dssp CEEEEEETTBSSS-HHHHHHHHHH---HT-EEEEETS-TTSSGGG
T ss_pred CeEEEEcCCCCccCHHHHHHHHHH---cCCCeEECCCCCCccccc
Confidence 335566699999999998 66553 378999999999987654
No 101
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.10 E-value=0.00089 Score=63.16 Aligned_cols=55 Identities=20% Similarity=0.048 Sum_probs=42.5
Q ss_pred HHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccCC
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEHC 246 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~p 246 (272)
++-.|..+++|++...+++|.|+|+.|. ...+..++|-.-.+.-+.||+..+=.|
T Consensus 322 ~~VdL~~It~pvy~~a~~~DhI~P~~Sv-~~g~~l~~g~~~f~l~~sGHIa~vVN~ 376 (445)
T COG3243 322 TMVDLGDITCPVYNLAAEEDHIAPWSSV-YLGARLLGGEVTFVLSRSGHIAGVVNP 376 (445)
T ss_pred EEechhhcccceEEEeecccccCCHHHH-HHHHHhcCCceEEEEecCceEEEEeCC
Confidence 3346889999999999999999999997 333335777666777899999866543
No 102
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.09 E-value=0.0015 Score=56.81 Aligned_cols=70 Identities=21% Similarity=0.208 Sum_probs=42.4
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHh---cCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccc
Q 024115 42 TLDGVDVMGERLAQEVLEVIERK---RNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLE 118 (272)
Q Consensus 42 t~~g~~~~~~~lA~~v~~ll~~~---~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 118 (272)
-+.|.......+.+++...+++. ....++.+.||||||.+|-++...+..... ..
T Consensus 99 vh~Gf~~~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~----------------------~~ 156 (229)
T cd00519 99 VHSGFYSAYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGP----------------------GS 156 (229)
T ss_pred EcHHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCC----------------------CC
Confidence 34455545555555555554422 245789999999999999554444332110 01
Q ss_pred cceeEEecCCCCCCC
Q 024115 119 AINFITVATPHLGSR 133 (272)
Q Consensus 119 ~~~~v~~atP~~G~~ 133 (272)
....+++++|..|..
T Consensus 157 ~i~~~tFg~P~vg~~ 171 (229)
T cd00519 157 DVTVYTFGQPRVGNA 171 (229)
T ss_pred ceEEEEeCCCCCCCH
Confidence 136899999998763
No 103
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.04 E-value=0.00068 Score=66.62 Aligned_cols=73 Identities=18% Similarity=0.198 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHH---hcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecC
Q 024115 51 ERLAQEVLEVIER---KRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVAT 127 (272)
Q Consensus 51 ~~lA~~v~~ll~~---~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~at 127 (272)
+.+-..+..+|+. ..+-+||+||||||||+++.|.|... ...... .+.-. ... ....+..+|++++
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv-~~~~~~------gG~gG---~~W-~dKyI~s~I~Iag 261 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV-EAPAPM------GGGGG---PGW-CAKHIKAVMNIGG 261 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc-cccccc------cCCcc---hHH-HHHHHHHheeccc
Confidence 3333444444442 23468999999999999997766431 110000 00000 001 1234678999999
Q ss_pred CCCCCCC
Q 024115 128 PHLGSRG 134 (272)
Q Consensus 128 P~~G~~~ 134 (272)
|++|+..
T Consensus 262 p~lGs~K 268 (642)
T PLN02517 262 PFLGVPK 268 (642)
T ss_pred ccCCcHH
Confidence 9999864
No 104
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.03 E-value=0.0017 Score=57.59 Aligned_cols=48 Identities=10% Similarity=0.028 Sum_probs=36.0
Q ss_pred HHhccCCccEEEEecCCCeeecceec-cccccCCCCCC-cccccCCCCCccc
Q 024115 193 SALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKW-EDSLDEKYPHIVH 242 (272)
Q Consensus 193 ~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a-~l~i~~~~~H~~~ 242 (272)
+..+.+++|+||++|..|.+||+.-+ .+-+ ..+++ +-.+.+|+||--.
T Consensus 186 ~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye--~~k~~~epl~v~g~gH~~~ 235 (258)
T KOG1552|consen 186 EKISKITCPVLIIHGTDDEVVDFSHGKALYE--RCKEKVEPLWVKGAGHNDI 235 (258)
T ss_pred CcceeccCCEEEEecccCceecccccHHHHH--hccccCCCcEEecCCCccc
Confidence 35678999999999999999999987 4432 24444 5667789998543
No 105
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=96.96 E-value=0.0011 Score=61.08 Aligned_cols=55 Identities=18% Similarity=0.058 Sum_probs=35.9
Q ss_pred hHHHHHhccCCccEEEEecCCCeeecceeccccccCCCCC-CcccccCCCCCccccc
Q 024115 189 NYFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPK-WEDSLDEKYPHIVHHE 244 (272)
Q Consensus 189 ~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~-a~l~i~~~~~H~~~~e 244 (272)
.|....-+++++|+++..|-.|.++|+.+. ++..+.|++ =++.+|+.++|-..-+
T Consensus 252 ~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~-fA~yN~i~~~K~l~vyp~~~He~~~~ 307 (320)
T PF05448_consen 252 FDAVNFARRIKCPVLFSVGLQDPVCPPSTQ-FAAYNAIPGPKELVVYPEYGHEYGPE 307 (320)
T ss_dssp T-HHHHGGG--SEEEEEEETT-SSS-HHHH-HHHHCC--SSEEEEEETT--SSTTHH
T ss_pred hhHHHHHHHcCCCEEEEEecCCCCCCchhH-HHHHhccCCCeeEEeccCcCCCchhh
Confidence 366666789999999999999999999996 555566765 3588999999966443
No 106
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=96.86 E-value=0.00079 Score=67.46 Aligned_cols=49 Identities=10% Similarity=-0.117 Sum_probs=38.7
Q ss_pred hccCCccEEEEecCCCeeecceec-cccccC--CCCCCcccccCCCCCcccc
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS-SIRRNS--ELPKWEDSLDEKYPHIVHH 243 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~--~ip~a~l~i~~~~~H~~~~ 243 (272)
..+++.|+|++||.+|..||.+.| .+..+- .-...+++++|+.+|.+.-
T Consensus 547 ~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 547 ADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred hcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 458999999999999999999998 332221 2245789999999999866
No 107
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=96.83 E-value=0.0012 Score=67.25 Aligned_cols=37 Identities=30% Similarity=0.402 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhcC----------------CCeEEEEEechhHHHHHHHHHh
Q 024115 51 ERLAQEVLEVIERKRN----------------LRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~----------------~~~i~lVGHSmGG~VaR~al~~ 88 (272)
++...|+..+.. .+. ..+++++||||||++++.+++.
T Consensus 523 rQ~v~Dll~L~~-~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 523 RQSILDLLGLRL-SLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHH-HHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 777788877776 333 4599999999999999887755
No 108
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=96.79 E-value=0.0018 Score=61.31 Aligned_cols=43 Identities=26% Similarity=0.386 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhc--CCCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 51 ERLAQEVLEVIERKR--NLRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~--~~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
+++-+.|...+...+ +..+|.++|.||||+++ .-++.++++++
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~A-vRlA~le~~Rl 286 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYA-VRLAALEDPRL 286 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHH-HHHHHHTTTT-
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHH-HHHHHhcccce
Confidence 456677777777444 34599999999999987 44455566654
No 109
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=96.77 E-value=0.0054 Score=52.69 Aligned_cols=57 Identities=11% Similarity=-0.100 Sum_probs=33.9
Q ss_pred hccCCccEEEEecCCCeeecceec-ccccc--CCCCCCcccccCCCCCcccccCCccCCc
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS-SIRRN--SELPKWEDSLDEKYPHIVHHEHCKACDA 251 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~--~~ip~a~l~i~~~~~H~~~~e~p~~v~~ 251 (272)
..+++.|+++..|..|..+|.+.. .+... +.=...++++|++++|++.....+..++
T Consensus 141 ~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~ 200 (218)
T PF01738_consen 141 APKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDP 200 (218)
T ss_dssp GGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--H
T ss_pred hcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCH
Confidence 345778999999999999998853 22111 1125678999999999998877764443
No 110
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.71 E-value=0.0029 Score=55.68 Aligned_cols=43 Identities=26% Similarity=0.364 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 49 MGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
.++.|++-|..+.+ ..+.++|++|+||||+.|...++..+...
T Consensus 75 s~~~l~~~L~~L~~-~~~~~~I~ilaHSMG~rv~~~aL~~l~~~ 117 (233)
T PF05990_consen 75 SGPALARFLRDLAR-APGIKRIHILAHSMGNRVLLEALRQLASE 117 (233)
T ss_pred HHHHHHHHHHHHHh-ccCCceEEEEEeCchHHHHHHHHHHHHhc
Confidence 34555555555544 45789999999999999998888775544
No 111
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.69 E-value=0.0035 Score=53.84 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=30.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHh
Q 024115 41 LTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 41 ~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
.+..+++.++++++++|.+... ..++.|+|||+||.|| +.+++
T Consensus 43 ~~~~si~~la~~y~~~I~~~~~----~gp~~L~G~S~Gg~lA-~E~A~ 85 (229)
T PF00975_consen 43 PPPDSIEELASRYAEAIRARQP----EGPYVLAGWSFGGILA-FEMAR 85 (229)
T ss_dssp HEESSHHHHHHHHHHHHHHHTS----SSSEEEEEETHHHHHH-HHHHH
T ss_pred CCCCCHHHHHHHHHHHhhhhCC----CCCeeehccCccHHHH-HHHHH
Confidence 3456677776666666544333 3499999999999999 77766
No 112
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=96.58 E-value=0.0043 Score=52.88 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 53 LAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 53 lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
..+.+.++++ ....+.+.|||.||||+.| ++++.+++-
T Consensus 45 a~~~l~~~i~-~~~~~~~~liGSSlGG~~A-~~La~~~~~ 82 (187)
T PF05728_consen 45 AIAQLEQLIE-ELKPENVVLIGSSLGGFYA-TYLAERYGL 82 (187)
T ss_pred HHHHHHHHHH-hCCCCCeEEEEEChHHHHH-HHHHHHhCC
Confidence 3466777787 4555569999999999999 667776653
No 113
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=96.50 E-value=0.0098 Score=51.91 Aligned_cols=49 Identities=22% Similarity=0.210 Sum_probs=38.3
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCe--EEEEEechhHHHHHHHHHhhcCCCC
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRK--ISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~--i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
+.+...+-+.+||...|+++..+.+ ..++||||||+.| +.++..||+.+
T Consensus 90 ~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~A-l~~~l~~Pd~F 140 (251)
T PF00756_consen 90 GGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGA-LYLALRHPDLF 140 (251)
T ss_dssp THHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHH-HHHHHHSTTTE
T ss_pred CCcccceehhccchhHHHHhcccccceeEEeccCCCcHHH-HHHHHhCcccc
Confidence 3444557788999999997655432 6999999999999 77788899875
No 114
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=96.50 E-value=0.051 Score=49.08 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=44.9
Q ss_pred chhhhhhhhhhhhccCCcc--eEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCC-CeEEEEEechhHHHHHHH
Q 024115 9 KLLHVKLVQYWCLSFHNIC--WIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRNL-RKISFVAHSVGGLVARYA 85 (272)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~-~~i~lVGHSmGG~VaR~a 85 (272)
|+.|++.....+ +++..| +.+|.-+..-.. +.+.. ..-+..+.++++ .+++ +++.++|||.||-.| +.
T Consensus 50 DFkYi~~~l~~~-~iR~I~iN~PGf~~t~~~~~-~~~~n-----~er~~~~~~ll~-~l~i~~~~i~~gHSrGcena-l~ 120 (297)
T PF06342_consen 50 DFKYIRPPLDEA-GIRFIGINYPGFGFTPGYPD-QQYTN-----EERQNFVNALLD-ELGIKGKLIFLGHSRGCENA-LQ 120 (297)
T ss_pred chhhhhhHHHHc-CeEEEEeCCCCCCCCCCCcc-cccCh-----HHHHHHHHHHHH-HcCCCCceEEEEeccchHHH-HH
Confidence 788888765443 233221 345555442222 22222 455688899999 6766 579999999999988 55
Q ss_pred HHhhc
Q 024115 86 IGKLY 90 (272)
Q Consensus 86 l~~l~ 90 (272)
++..+
T Consensus 121 la~~~ 125 (297)
T PF06342_consen 121 LAVTH 125 (297)
T ss_pred HHhcC
Confidence 55534
No 115
>PLN02571 triacylglycerol lipase
Probab=96.39 E-value=0.0097 Score=56.51 Aligned_cols=39 Identities=21% Similarity=0.338 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHhcCC-CeEEEEEechhHHHHHHHHHh
Q 024115 50 GERLAQEVLEVIERKRNL-RKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 50 ~~~lA~~v~~ll~~~~~~-~~i~lVGHSmGG~VaR~al~~ 88 (272)
-+++.++|.+++++..+- .+|++.||||||.+|-++...
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 377888888888843332 379999999999988554433
No 116
>PLN02408 phospholipase A1
Probab=96.38 E-value=0.0081 Score=56.21 Aligned_cols=62 Identities=18% Similarity=0.327 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHhcCC-CeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCC
Q 024115 51 ERLAQEVLEVIERKRNL-RKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPH 129 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~-~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~ 129 (272)
+++.++|.+++++..+- .+|++.||||||-+|-++...+..... ...+..++++++|.
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~---------------------~~~~V~v~tFGsPR 240 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFK---------------------RAPMVTVISFGGPR 240 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcC---------------------CCCceEEEEcCCCC
Confidence 56777788888743332 369999999999988554443321110 00123689999999
Q ss_pred CCCC
Q 024115 130 LGSR 133 (272)
Q Consensus 130 ~G~~ 133 (272)
.|..
T Consensus 241 VGN~ 244 (365)
T PLN02408 241 VGNR 244 (365)
T ss_pred cccH
Confidence 8864
No 117
>PLN02324 triacylglycerol lipase
Probab=96.22 E-value=0.013 Score=55.63 Aligned_cols=40 Identities=23% Similarity=0.392 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHhcCC-CeEEEEEechhHHHHHHHHHh
Q 024115 49 MGERLAQEVLEVIERKRNL-RKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~~~~-~~i~lVGHSmGG~VaR~al~~ 88 (272)
+-+++.++|.+++++..+- .+|++.||||||-+|-++...
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3477888899998854442 479999999999988554443
No 118
>PLN02454 triacylglycerol lipase
Probab=96.20 E-value=0.013 Score=55.53 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHhcCCC-eEEEEEechhHHHHHHHHHh
Q 024115 49 MGERLAQEVLEVIERKRNLR-KISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~~~~~-~i~lVGHSmGG~VaR~al~~ 88 (272)
+-+++-.+|.+++++..+-+ +|++.||||||.+|-++...
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 33677778888887433322 59999999999998554433
No 119
>KOG2205 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.18 E-value=0.00077 Score=62.63 Aligned_cols=89 Identities=20% Similarity=0.155 Sum_probs=65.2
Q ss_pred cceeEEecCCCCCCCCCCCcccchhhhHHHHHHHHHHHHHHhhcccchhccCCCCCchhhHhhhccCCcchHHHHHhccC
Q 024115 119 AINFITVATPHLGSRGNKQVPFLFGVTAFEKAANFVIHLIFRRTGRHLFLNDNDEGRPPLLRRMVEDEDENYFMSALCAF 198 (272)
Q Consensus 119 ~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~s~~~l~l~d~~~~~~~~L~~l~~~~~~~d~~~~L~~f 198 (272)
...++++..||+|..+... -+..|++.++++. -..+..||.++|..+-...++.++.. ...|..|
T Consensus 256 l~T~~sl~~PHLG~~Y~~~-~~~~Gv~~ikklK-------ks~sl~QLtlrD~~DL~~~F~Ykls~-------~t~l~~F 320 (424)
T KOG2205|consen 256 LRTQKDNHLPHLGVEYRLT-ELCEGVKKIKKLK-------KSASLIQLTLRDLCDLRMAFWYKLSE-------ITLLEEF 320 (424)
T ss_pred HHHHhhcCCcchhHHHHHH-HHHHHHHHHHhhH-------hhhhHhHeeccccHhHHHHHHHHHHH-------HHHHHHH
Confidence 4578999999999987543 3345665555433 23456688888876555677777753 4578999
Q ss_pred CccEEEEecCCCeeecceecccccc
Q 024115 199 KRRVAYSNACYDHIVGWRTSSIRRN 223 (272)
Q Consensus 199 ~~p~L~~~g~~D~iVP~~sa~l~~~ 223 (272)
++.+|+.+ .+|++||+.+|.+...
T Consensus 321 KNilLv~s-PqDryVPyhSArie~c 344 (424)
T KOG2205|consen 321 KNILLVES-PQDRYVPYHSARIEFC 344 (424)
T ss_pred hhheeecC-CccCceechhhheecc
Confidence 99999988 8999999999977543
No 120
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.17 E-value=0.012 Score=54.78 Aligned_cols=62 Identities=19% Similarity=0.335 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHH-hcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCC
Q 024115 50 GERLAQEVLEVIER-KRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATP 128 (272)
Q Consensus 50 ~~~lA~~v~~ll~~-~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP 128 (272)
+++....+.+.|.+ ..+.++|+|||||||+.|.-+.+..+...... + .+++++.+++|
T Consensus 201 A~~aG~~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~----------------~-----lVe~VvL~Gap 259 (345)
T PF05277_consen 201 AEKAGKVLADALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAF----------------G-----LVENVVLMGAP 259 (345)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhcccc----------------C-----eEeeEEEecCC
Confidence 34444444444442 35778999999999999886666665543210 1 24688888888
Q ss_pred CCCC
Q 024115 129 HLGS 132 (272)
Q Consensus 129 ~~G~ 132 (272)
--..
T Consensus 260 v~~~ 263 (345)
T PF05277_consen 260 VPSD 263 (345)
T ss_pred CCCC
Confidence 7543
No 121
>PLN00413 triacylglycerol lipase
Probab=96.12 E-value=0.016 Score=55.81 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHh
Q 024115 52 RLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 52 ~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
.+.+.|.++++ .....++++.||||||.+|-++.+.
T Consensus 269 ~i~~~Lk~ll~-~~p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFD-QNPTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHH-HCCCCeEEEEecCHHHHHHHHHHHH
Confidence 56677888887 4555789999999999988555443
No 122
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=96.03 E-value=0.27 Score=45.02 Aligned_cols=57 Identities=9% Similarity=-0.040 Sum_probs=14.5
Q ss_pred hHHHHHhccCCccEEEEecCCCeeecceec--cc-cccC-----CCCCCcccccCCCCCcccccC
Q 024115 189 NYFMSALCAFKRRVAYSNACYDHIVGWRTS--SI-RRNS-----ELPKWEDSLDEKYPHIVHHEH 245 (272)
Q Consensus 189 ~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa--~l-~~~~-----~ip~a~l~i~~~~~H~~~~e~ 245 (272)
..+...+.++..|+|++.+..|..||...- .+ ..-+ .+-...--++||+.|-+--+.
T Consensus 222 e~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~ 286 (303)
T PF08538_consen 222 ERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPS 286 (303)
T ss_dssp -HHHHTGGG--S-EEEEEE--TT------------------------------------------
T ss_pred HHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccc
Confidence 356667889999999999999999988654 11 1111 112233568899999886443
No 123
>PRK10162 acetyl esterase; Provisional
Probab=95.94 E-value=0.038 Score=50.64 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=29.8
Q ss_pred CccEEEEecCCCeeecceec---cccccCCCCCCcccccCCCCCcccc
Q 024115 199 KRRVAYSNACYDHIVGWRTS---SIRRNSELPKWEDSLDEKYPHIVHH 243 (272)
Q Consensus 199 ~~p~L~~~g~~D~iVP~~sa---~l~~~~~ip~a~l~i~~~~~H~~~~ 243 (272)
-.|+++++|..|.+++-... .+..+ .++ .++.++++..|++..
T Consensus 248 lPp~~i~~g~~D~L~de~~~~~~~L~~a-Gv~-v~~~~~~g~~H~f~~ 293 (318)
T PRK10162 248 VPPCFIAGAEFDPLLDDSRLLYQTLAAH-QQP-CEFKLYPGTLHAFLH 293 (318)
T ss_pred CCCeEEEecCCCcCcChHHHHHHHHHHc-CCC-EEEEEECCCceehhh
Confidence 35899999999998753322 12222 333 779999999998754
No 124
>PLN02802 triacylglycerol lipase
Probab=95.94 E-value=0.017 Score=56.01 Aligned_cols=62 Identities=21% Similarity=0.341 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHhcCC-CeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCC
Q 024115 51 ERLAQEVLEVIERKRNL-RKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPH 129 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~-~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~ 129 (272)
+++.++|.+++++..+- .+|++.||||||-+|-++...+..... ...+..++++++|.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~---------------------~~~pV~vyTFGsPR 370 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVP---------------------AAPPVAVFSFGGPR 370 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCC---------------------CCCceEEEEcCCCC
Confidence 56667778887743332 379999999999988554433321110 00123689999999
Q ss_pred CCCC
Q 024115 130 LGSR 133 (272)
Q Consensus 130 ~G~~ 133 (272)
.|..
T Consensus 371 VGN~ 374 (509)
T PLN02802 371 VGNR 374 (509)
T ss_pred cccH
Confidence 8864
No 125
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.93 E-value=0.017 Score=49.27 Aligned_cols=47 Identities=11% Similarity=-0.031 Sum_probs=33.0
Q ss_pred cCCccEEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcccccC
Q 024115 197 AFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIVHHEH 245 (272)
Q Consensus 197 ~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~~~e~ 245 (272)
..+.|.+++.|..|.+|++... +..++. ...++++.+++.|-++-+.
T Consensus 147 P~P~~~lvi~g~~Ddvv~l~~~-l~~~~~-~~~~~i~i~~a~HFF~gKl 193 (210)
T COG2945 147 PCPSPGLVIQGDADDVVDLVAV-LKWQES-IKITVITIPGADHFFHGKL 193 (210)
T ss_pred CCCCCceeEecChhhhhcHHHH-HHhhcC-CCCceEEecCCCceecccH
Confidence 3456889999999999988876 322223 4456778888888776443
No 126
>PLN02310 triacylglycerol lipase
Probab=95.83 E-value=0.021 Score=54.11 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhc--C-CCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecC
Q 024115 51 ERLAQEVLEVIERKR--N-LRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVAT 127 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~--~-~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~at 127 (272)
+++.++|.++++... + ..+|++.||||||-+|-++...+.... ...+..++++++
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~----------------------~~~~v~vyTFGs 246 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI----------------------PDLFVSVISFGA 246 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC----------------------cCcceeEEEecC
Confidence 667778888887322 2 348999999999998844332221110 001236889999
Q ss_pred CCCCCC
Q 024115 128 PHLGSR 133 (272)
Q Consensus 128 P~~G~~ 133 (272)
|..|..
T Consensus 247 PRVGN~ 252 (405)
T PLN02310 247 PRVGNI 252 (405)
T ss_pred CCcccH
Confidence 998863
No 127
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=95.82 E-value=0.01 Score=55.34 Aligned_cols=57 Identities=23% Similarity=0.136 Sum_probs=50.6
Q ss_pred HHhccCCccEEEEecCCCeeecceeccccccCCCCCC--cccccCCCCCcccccCCccC
Q 024115 193 SALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKW--EDSLDEKYPHIVHHEHCKAC 249 (272)
Q Consensus 193 ~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a--~l~i~~~~~H~~~~e~p~~v 249 (272)
..+.+++.|++++.|..|...|+.+-..+....+|+. -+...+++.|....|-+++.
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 4688999999999999999988888877777789998 67888999999999999986
No 128
>PRK04940 hypothetical protein; Provisional
Probab=95.78 E-value=0.021 Score=48.28 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=26.5
Q ss_pred cEEEEecCCCeeecceeccccccCCCCCC-cccccCCCCCcc
Q 024115 201 RVAYSNACYDHIVGWRTSSIRRNSELPKW-EDSLDEKYPHIV 241 (272)
Q Consensus 201 p~L~~~g~~D~iVP~~sa~l~~~~~ip~a-~l~i~~~~~H~~ 241 (272)
+.++.-...|.+..++.|.-. +.+. +..+.+|+.|.+
T Consensus 126 r~~vllq~gDEvLDyr~a~~~----y~~~y~~~v~~GGdH~f 163 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEE----LHPYYEIVWDEEQTHKF 163 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHH----hccCceEEEECCCCCCC
Confidence 446677789999999988322 2344 677888888876
No 129
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.75 E-value=0.0036 Score=48.02 Aligned_cols=43 Identities=12% Similarity=0.043 Sum_probs=38.4
Q ss_pred CccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccc
Q 024115 199 KRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHH 243 (272)
Q Consensus 199 ~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~ 243 (272)
+.|+|++++..|.++|++.+ .++. .+++++++..+++||....
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~--~l~~s~lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAA--RLPGSRLVTVDGAGHGVYA 77 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHH--HCCCceEEEEeccCcceec
Confidence 57999999999999999998 4444 6999999999999999985
No 130
>PLN02162 triacylglycerol lipase
Probab=95.60 E-value=0.034 Score=53.50 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHH
Q 024115 52 RLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIG 87 (272)
Q Consensus 52 ~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~ 87 (272)
.+-+.|.+++. ...-.++++.||||||-+|-++.+
T Consensus 263 ~I~~~L~~lL~-k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLA-RNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHH-hCCCceEEEEecChHHHHHHHHHH
Confidence 34455666666 344578999999999999855433
No 131
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=95.59 E-value=0.027 Score=52.24 Aligned_cols=44 Identities=27% Similarity=0.354 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHH-hcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 46 VDVMGERLAQEVLEVIER-KRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~-~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
+...|+.+|+-|..++.. ....++|++||||||+.||=++-..+
T Consensus 127 ~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~ 171 (331)
T PF00151_consen 127 TRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYL 171 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhc
Confidence 455667777777777742 24578999999999999995544443
No 132
>PLN02753 triacylglycerol lipase
Probab=95.45 E-value=0.04 Score=53.70 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHhcC----CCeEEEEEechhHHHHHHHH
Q 024115 50 GERLAQEVLEVIERKRN----LRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 50 ~~~lA~~v~~ll~~~~~----~~~i~lVGHSmGG~VaR~al 86 (272)
-+++-++|.+++++..+ ..+|++.||||||-+|-++.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSA 330 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHH
Confidence 36677778888874322 35899999999999884433
No 133
>PLN02934 triacylglycerol lipase
Probab=95.44 E-value=0.038 Score=53.65 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHH
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al 86 (272)
+++-+.|.++++ .....++++.||||||-+|-++.
T Consensus 305 ~~v~~~lk~ll~-~~p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 305 YAVRSKLKSLLK-EHKNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred HHHHHHHHHHHH-HCCCCeEEEeccccHHHHHHHHH
Confidence 456677888888 44557999999999999985543
No 134
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.37 E-value=0.039 Score=53.71 Aligned_cols=62 Identities=23% Similarity=0.367 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhc---CCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecC
Q 024115 51 ERLAQEVLEVIERKR---NLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVAT 127 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~---~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~at 127 (272)
+++.++|.++++... ...+|++.||||||-+|-++...+..... ...+..++++|+
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p---------------------~~~~VtvyTFGs 356 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVP---------------------ALSNISVISFGA 356 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCC---------------------CCCCeeEEEecC
Confidence 566778888887432 23479999999999988443322211100 001236788999
Q ss_pred CCCCCC
Q 024115 128 PHLGSR 133 (272)
Q Consensus 128 P~~G~~ 133 (272)
|..|..
T Consensus 357 PRVGN~ 362 (525)
T PLN03037 357 PRVGNL 362 (525)
T ss_pred CCccCH
Confidence 988875
No 135
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.19 E-value=0.021 Score=50.21 Aligned_cols=64 Identities=13% Similarity=0.051 Sum_probs=47.0
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCccccc--CC----CCCcccccCC-ccCCchhhc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLD--EK----YPHIVHHEHC-KACDAEQLD 255 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~--~~----~~H~~~~e~p-~~v~~~~~~ 255 (272)
...+..++++.|+..+...+|.-+|+.+. .+... .+++.+... +. -||+-..-.| |.+-+++|+
T Consensus 207 ~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~--y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~ 278 (281)
T COG4757 207 NYRQVYAAVRTPITFSRALDDPWAPPASRDAFASF--YRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLG 278 (281)
T ss_pred HHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHh--hhcCcccceecCcccCcccchhhhccchHHHHHHHHH
Confidence 35667889999999999999999999988 55543 566665443 22 4788877666 777666664
No 136
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.19 E-value=0.035 Score=49.84 Aligned_cols=49 Identities=14% Similarity=0.067 Sum_probs=36.7
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceeccccccCCCCCCc-ccccCCCCC
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWE-DSLDEKYPH 239 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~-l~i~~~~~H 239 (272)
|....-++++.|+|++.|--|.++|+.+- ++..+.+++.+ +.+|+-..|
T Consensus 250 D~~n~A~RiK~pvL~svgL~D~vcpPstq-FA~yN~l~~~K~i~iy~~~aH 299 (321)
T COG3458 250 DIVNLAARIKVPVLMSVGLMDPVCPPSTQ-FAAYNALTTSKTIEIYPYFAH 299 (321)
T ss_pred hhhhHHHhhccceEEeecccCCCCCChhh-HHHhhcccCCceEEEeecccc
Confidence 45555678999999999999999999885 66666677754 455665544
No 137
>PLN02719 triacylglycerol lipase
Probab=95.16 E-value=0.053 Score=52.72 Aligned_cols=36 Identities=31% Similarity=0.455 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhcC----CCeEEEEEechhHHHHHHHH
Q 024115 51 ERLAQEVLEVIERKRN----LRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~----~~~i~lVGHSmGG~VaR~al 86 (272)
+++-++|.+++++..+ ..+|++.||||||-+|-++.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSA 316 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHH
Confidence 5667777777774322 24899999999999884444
No 138
>PLN02761 lipase class 3 family protein
Probab=95.16 E-value=0.054 Score=52.76 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhc----C-CCeEEEEEechhHHHHHHHH
Q 024115 51 ERLAQEVLEVIERKR----N-LRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~----~-~~~i~lVGHSmGG~VaR~al 86 (272)
+++.++|..+++... + ..+|++.||||||-+|-++.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSA 312 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHH
Confidence 667788888887431 2 24799999999999884443
No 139
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.15 E-value=0.019 Score=56.62 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=46.1
Q ss_pred hhhhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHH---Hhc-CCCeEEEEEechhHHHHHHHH
Q 024115 11 LHVKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIE---RKR-NLRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~---~~~-~~~~i~lVGHSmGG~VaR~al 86 (272)
.++..+||.++.+|.+ +++.|+.... .+ + ...++|+.++++ ++. ...+|.++||||||.++ +.+
T Consensus 47 ~~l~~~Gy~vv~~D~R---G~g~S~g~~~--~~-~-----~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a-~~~ 114 (550)
T TIGR00976 47 AWFVAQGYAVVIQDTR---GRGASEGEFD--LL-G-----SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQ-LLA 114 (550)
T ss_pred HHHHhCCcEEEEEecc---ccccCCCceE--ec-C-----cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHH-HHH
Confidence 3566789999988876 6777764321 11 1 123344444444 121 23699999999999999 656
Q ss_pred HhhcCCCCc
Q 024115 87 GKLYRPPKI 95 (272)
Q Consensus 87 ~~l~~~~~~ 95 (272)
+..+|+.+.
T Consensus 115 a~~~~~~l~ 123 (550)
T TIGR00976 115 AVLQPPALR 123 (550)
T ss_pred hccCCCcee
Confidence 666776554
No 140
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=95.13 E-value=0.079 Score=50.59 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHhc----CCCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 46 VDVMGERLAQEVLEVIERKR----NLRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~----~~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
.....+-+++||...+++.. +.++..++|+||||+.+ ++++..+|+.+
T Consensus 262 ~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~A-L~~al~~Pd~F 313 (411)
T PRK10439 262 NADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAA-LYAGLHWPERF 313 (411)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHH-HHHHHhCcccc
Confidence 34455778899999998642 34578999999999999 77888899876
No 141
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.10 E-value=0.13 Score=43.51 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=49.0
Q ss_pred cceEEEEccCCCCCCCCCCc-HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccc
Q 024115 26 ICWIHFVGSERNMSKLTLDG-VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSAD 104 (272)
Q Consensus 26 ~~~~~~~~s~~n~~~~t~~g-~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~ 104 (272)
..|+++=.+..+...-..++ -+..|.+|++.+..+-..+..-.++++||||.|..++=+++.. .+..
T Consensus 66 V~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~-~~~~----------- 133 (177)
T PF06259_consen 66 VAWLGYDAPAGGLPDAASPGYARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQ-GGLR----------- 133 (177)
T ss_pred EEEcCCCCCCCccccccCchHHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhh-CCCC-----------
Confidence 34777766632221111122 2444555555555554423245689999999999988576644 2222
Q ss_pred cccccccccccccccceeEEecCCCCCCCC
Q 024115 105 TSSENSRGTMAGLEAINFITVATPHLGSRG 134 (272)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~v~~atP~~G~~~ 134 (272)
+..++.+++|-.|...
T Consensus 134 --------------vddvv~~GSPG~g~~~ 149 (177)
T PF06259_consen 134 --------------VDDVVLVGSPGMGVDS 149 (177)
T ss_pred --------------cccEEEECCCCCCCCC
Confidence 4578999999877653
No 142
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.97 E-value=0.066 Score=46.93 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 55 QEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 55 ~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
+.+..+++ ..+ .++.+.|||+||.+|-|+.+.+
T Consensus 73 ~yl~~~~~-~~~-~~i~v~GHSkGGnLA~yaa~~~ 105 (224)
T PF11187_consen 73 AYLKKIAK-KYP-GKIYVTGHSKGGNLAQYAAANC 105 (224)
T ss_pred HHHHHHHH-hCC-CCEEEEEechhhHHHHHHHHHc
Confidence 33444555 233 3699999999999997766553
No 143
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=94.97 E-value=0.13 Score=53.10 Aligned_cols=29 Identities=14% Similarity=0.047 Sum_probs=24.7
Q ss_pred HHHHHhccCCccEEEEecCCCeeecceec
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVGWRTS 218 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP~~sa 218 (272)
++...+.++++|+|+++|-+|..|++..+
T Consensus 446 n~~~~~~kIkvPvLlIhGw~D~~V~~~~s 474 (767)
T PRK05371 446 NYLKDADKIKASVLVVHGLNDWNVKPKQV 474 (767)
T ss_pred CHhhHhhCCCCCEEEEeeCCCCCCChHHH
Confidence 45667789999999999999999987654
No 144
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.84 E-value=0.048 Score=48.81 Aligned_cols=47 Identities=15% Similarity=0.266 Sum_probs=32.8
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHh
Q 024115 37 NMSKLTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 37 n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
|.+..++..++.+++.+.++|.+ .....++.++|||+||.|| |.++.
T Consensus 38 ~~~~~~~~~l~~~a~~yv~~Ir~----~QP~GPy~L~G~S~GG~vA-~evA~ 84 (257)
T COG3319 38 GAGEQPFASLDDMAAAYVAAIRR----VQPEGPYVLLGWSLGGAVA-FEVAA 84 (257)
T ss_pred cccccccCCHHHHHHHHHHHHHH----hCCCCCEEEEeeccccHHH-HHHHH
Confidence 33446777777665555444433 3445799999999999999 77765
No 145
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.81 E-value=0.076 Score=46.78 Aligned_cols=49 Identities=12% Similarity=-0.063 Sum_probs=37.1
Q ss_pred cCCccEEEEecCCCeeecceec-cccccC--CCCCCcccccCCCCCcccccC
Q 024115 197 AFKRRVAYSNACYDHIVGWRTS-SIRRNS--ELPKWEDSLDEKYPHIVHHEH 245 (272)
Q Consensus 197 ~f~~p~L~~~g~~D~iVP~~sa-~l~~~~--~ip~a~l~i~~~~~H~~~~e~ 245 (272)
++++|+|+..+..|..+|...- .+...- .-...++.+|.++.|.++.++
T Consensus 156 ~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 156 KIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDR 207 (236)
T ss_pred cccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCC
Confidence 5788999999999999988744 343221 113577899999999999876
No 146
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=94.67 E-value=0.017 Score=52.15 Aligned_cols=46 Identities=22% Similarity=0.302 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHH-HHHHHHHhhcCCCCc
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGL-VARYAIGKLYRPPKI 95 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~-VaR~al~~l~~~~~~ 95 (272)
+.++ |.||++|.++++ +.+++.++-+|-=.|.+ .+|+++ .||+++.
T Consensus 79 yPsm-d~LAe~l~~Vl~-~f~lk~vIg~GvGAGAnIL~rfAl--~~p~~V~ 125 (283)
T PF03096_consen 79 YPSM-DQLAEMLPEVLD-HFGLKSVIGFGVGAGANILARFAL--KHPERVL 125 (283)
T ss_dssp ---H-HHHHCTHHHHHH-HHT---EEEEEETHHHHHHHHHHH--HSGGGEE
T ss_pred ccCH-HHHHHHHHHHHH-hCCccEEEEEeeccchhhhhhccc--cCcccee
Confidence 6777 999999999999 89999999999999998 677766 5787653
No 147
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=94.63 E-value=0.073 Score=47.63 Aligned_cols=54 Identities=26% Similarity=0.341 Sum_probs=38.9
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHh--cCCCeEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 41 LTLDGVDVMGERLAQEVLEVIERK--RNLRKISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 41 ~t~~g~~~~~~~lA~~v~~ll~~~--~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
++..|-+...+-|-++|.-+|++. ++-.+-.++||||||+++-.++ .-+|+.+.
T Consensus 108 ~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aL-L~~p~~F~ 163 (264)
T COG2819 108 QFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFAL-LTYPDCFG 163 (264)
T ss_pred CCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHH-hcCcchhc
Confidence 455565666677778888888853 3556799999999999885655 33667654
No 148
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=94.33 E-value=0.24 Score=45.00 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHH-HHHHHHHhhcCCCCc
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGL-VARYAIGKLYRPPKI 95 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~-VaR~al~~l~~~~~~ 95 (272)
+..+ |.||++|..+++ +.+++.|+-+|-=-|.+ ++|+|+ -||+++.
T Consensus 102 yPsm-d~LAd~l~~VL~-~f~lk~vIg~GvGAGAyIL~rFAl--~hp~rV~ 148 (326)
T KOG2931|consen 102 YPSM-DDLADMLPEVLD-HFGLKSVIGMGVGAGAYILARFAL--NHPERVL 148 (326)
T ss_pred CCCH-HHHHHHHHHHHH-hcCcceEEEecccccHHHHHHHHh--cChhhee
Confidence 5666 899999999999 89999999999999999 677766 4788764
No 149
>PLN02847 triacylglycerol lipase
Probab=94.28 E-value=0.1 Score=51.64 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=33.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHH---hcCCCeEEEEEechhHHHHHHHHHh
Q 024115 41 LTLDGVDVMGERLAQEVLEVIER---KRNLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 41 ~t~~g~~~~~~~lA~~v~~ll~~---~~~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
.-+.|+-..+..+.+.+...|.+ ...--+++++||||||.||=+ ++.
T Consensus 221 ~AH~Gml~AArwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAAL-LAi 270 (633)
T PLN02847 221 YAHCGMVAAARWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAAL-LTY 270 (633)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHH-HHH
Confidence 46788877777777776655442 234469999999999999844 443
No 150
>PRK10115 protease 2; Provisional
Probab=94.17 E-value=0.038 Score=56.19 Aligned_cols=47 Identities=11% Similarity=-0.132 Sum_probs=31.9
Q ss_pred HhccCCcc-EEEEecCCCeeecceec-ccccc---CCCCCCccccc---CCCCCcc
Q 024115 194 ALCAFKRR-VAYSNACYDHIVGWRTS-SIRRN---SELPKWEDSLD---EKYPHIV 241 (272)
Q Consensus 194 ~L~~f~~p-~L~~~g~~D~iVP~~sa-~l~~~---~~ip~a~l~i~---~~~~H~~ 241 (272)
.+.+++.| +|+++|.+|.-||+..+ .+.++ ... ..+++++ ++.||+.
T Consensus 600 ~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~-~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 600 NVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKT-DDHLLLLCTDMDSGHGG 654 (686)
T ss_pred ccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCC-CCceEEEEecCCCCCCC
Confidence 45677889 56779999999988877 33221 122 3455666 8999983
No 151
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=94.13 E-value=0.14 Score=42.65 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 53 LAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 53 lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
....+.++-+ .+.-.+.++-||||||-++-+....++.+
T Consensus 75 ~~~~~aql~~-~l~~gpLi~GGkSmGGR~aSmvade~~A~ 113 (213)
T COG3571 75 YIVAIAQLRA-GLAEGPLIIGGKSMGGRVASMVADELQAP 113 (213)
T ss_pred HHHHHHHHHh-cccCCceeeccccccchHHHHHHHhhcCC
Confidence 3344444444 34446899999999999997766665544
No 152
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=93.94 E-value=0.13 Score=42.61 Aligned_cols=36 Identities=33% Similarity=0.433 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 53 LAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 53 lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
+++.+...+.......+++++||||||.++ +.++..
T Consensus 49 ~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a-~~~a~~ 84 (212)
T smart00824 49 LVEAQAEAVLRAAGGRPFVLVGHSSGGLLA-HAVAAR 84 (212)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEECHHHHHH-HHHHHH
Confidence 334333333323455789999999999999 666654
No 153
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=93.94 E-value=0.13 Score=46.03 Aligned_cols=38 Identities=24% Similarity=0.314 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhc-CCCeEEEEEechhHHHHHHHHHhhcC
Q 024115 53 LAQEVLEVIERKR-NLRKISFVAHSVGGLVARYAIGKLYR 91 (272)
Q Consensus 53 lA~~v~~ll~~~~-~~~~i~lVGHSmGG~VaR~al~~l~~ 91 (272)
-.+.|.+++.+.. .-.+++|||||+|++|+ +.+.++.+
T Consensus 68 k~~~i~~~~~~~~~~~~~liLiGHSIGayi~-levl~r~~ 106 (266)
T PF10230_consen 68 KIDFIKELIPQKNKPNVKLILIGHSIGAYIA-LEVLKRLP 106 (266)
T ss_pred HHHHHHHHhhhhcCCCCcEEEEeCcHHHHHH-HHHHHhcc
Confidence 3344555555211 45799999999999999 55555565
No 154
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=93.93 E-value=0.27 Score=41.45 Aligned_cols=69 Identities=16% Similarity=0.095 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEE
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFIT 124 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~ 124 (272)
+.......+.+.|.+... ...-.+++|+|+|.|+.|+..++.. ..+. .....++...++
T Consensus 59 S~~~G~~~~~~~i~~~~~-~CP~~kivl~GYSQGA~V~~~~~~~---~~l~-----------------~~~~~~I~avvl 117 (179)
T PF01083_consen 59 SVAAGVANLVRLIEEYAA-RCPNTKIVLAGYSQGAMVVGDALSG---DGLP-----------------PDVADRIAAVVL 117 (179)
T ss_dssp HHHHHHHHHHHHHHHHHH-HSTTSEEEEEEETHHHHHHHHHHHH---TTSS-----------------HHHHHHEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHH-hCCCCCEEEEecccccHHHHHHHHh---ccCC-----------------hhhhhhEEEEEE
Confidence 455555677777777777 4555899999999999988777755 1110 011234567899
Q ss_pred ecCCCCCCCC
Q 024115 125 VATPHLGSRG 134 (272)
Q Consensus 125 ~atP~~G~~~ 134 (272)
++.|......
T Consensus 118 fGdP~~~~~~ 127 (179)
T PF01083_consen 118 FGDPRRGAGQ 127 (179)
T ss_dssp ES-TTTBTTT
T ss_pred ecCCcccCCc
Confidence 9999986543
No 155
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=93.84 E-value=0.52 Score=41.17 Aligned_cols=41 Identities=20% Similarity=0.165 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhc--CCCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 52 RLAQEVLEVIERKR--NLRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 52 ~lA~~v~~ll~~~~--~~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
.+++-|..+.. +. +..+|-+.|+|.||..+ +.++..||+.+
T Consensus 80 ~i~~lv~~v~~-~~~iD~~RVyv~G~S~Gg~ma-~~la~~~pd~f 122 (220)
T PF10503_consen 80 FIAALVDYVAA-RYNIDPSRVYVTGLSNGGMMA-NVLACAYPDLF 122 (220)
T ss_pred hHHHHHHhHhh-hcccCCCceeeEEECHHHHHH-HHHHHhCCccc
Confidence 34444444554 33 45699999999999988 77777799865
No 156
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.81 E-value=0.13 Score=47.88 Aligned_cols=40 Identities=20% Similarity=0.277 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcC
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYR 91 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~ 91 (272)
+.|+.-|..+.+ ....++|++++||||..+.+.++..+--
T Consensus 175 ~aLe~~lr~La~-~~~~~~I~ilAHSMGtwl~~e~LrQLai 214 (377)
T COG4782 175 PALERLLRYLAT-DKPVKRIYLLAHSMGTWLLMEALRQLAI 214 (377)
T ss_pred HHHHHHHHHHHh-CCCCceEEEEEecchHHHHHHHHHHHhc
Confidence 334333333333 5678999999999999988777766543
No 157
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=93.31 E-value=0.11 Score=46.65 Aligned_cols=42 Identities=26% Similarity=0.369 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHh------cCCCeEEEEEechhHHHHHHHHHhhcC
Q 024115 49 MGERLAQEVLEVIERK------RNLRKISFVAHSVGGLVARYAIGKLYR 91 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~------~~~~~i~lVGHSmGG~VaR~al~~l~~ 91 (272)
++...++++.+-++.. .++.++.++|||.||-.| ++++..+.
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktA-FAlALg~a 142 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTA-FALALGYA 142 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHH-HHHHhccc
Confidence 4466666666666532 257899999999999999 88887554
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=93.05 E-value=0.19 Score=42.05 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
..++++|.++++ ..+-+..-+||-|+||+.| -+++.+++-
T Consensus 43 ~~a~~ele~~i~-~~~~~~p~ivGssLGGY~A-t~l~~~~Gi 82 (191)
T COG3150 43 QQALKELEKAVQ-ELGDESPLIVGSSLGGYYA-TWLGFLCGI 82 (191)
T ss_pred HHHHHHHHHHHH-HcCCCCceEEeecchHHHH-HHHHHHhCC
Confidence 677899999999 6777789999999999999 778777764
No 159
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.90 E-value=0.29 Score=45.46 Aligned_cols=62 Identities=24% Similarity=0.275 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCCcCCCCCCccccccccccccccccccceeEEecCCCC
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPKIENGEESSADTSSENSRGTMAGLEAINFITVATPHL 130 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~atP~~ 130 (272)
..+.+++..+++ ...--+|.+-||||||-+|-++...+--... .......++|++.|-.
T Consensus 155 ~~~~~~~~~L~~-~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~--------------------~~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIE-LYPNYSIWVTGHSLGGALASLAALDLVKNGL--------------------KTSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHH-hcCCcEEEEecCChHHHHHHHHHHHHHHcCC--------------------CCCCceEEEEecCCCc
Confidence 567788888888 5566899999999999877444333211111 0012458899999988
Q ss_pred CCC
Q 024115 131 GSR 133 (272)
Q Consensus 131 G~~ 133 (272)
|..
T Consensus 214 Gn~ 216 (336)
T KOG4569|consen 214 GNL 216 (336)
T ss_pred ccH
Confidence 864
No 160
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.82 E-value=0.17 Score=45.43 Aligned_cols=59 Identities=14% Similarity=-0.013 Sum_probs=38.7
Q ss_pred hccCCcc-----EEEEecCCCeeecceeccccccCCCCCCcccccCCCCCcc-cccCCccCCchhhc
Q 024115 195 LCAFKRR-----VAYSNACYDHIVGWRTSSIRRNSELPKWEDSLDEKYPHIV-HHEHCKACDAEQLD 255 (272)
Q Consensus 195 L~~f~~p-----~L~~~g~~D~iVP~~sa~l~~~~~ip~a~l~i~~~~~H~~-~~e~p~~v~~~~~~ 255 (272)
+..|..| +.+...++|..+|-... ..-.+.-||.+...++ +||+. ++-+-+.+.+...|
T Consensus 297 v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv-~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d 361 (371)
T KOG1551|consen 297 VANFPVPVDPSLIIVVQAKEDAYIPRTGV-RSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVD 361 (371)
T ss_pred hhcCCCCCCCCeEEEEEecCCccccccCc-HHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHH
Confidence 5566665 34455589999998554 3333357999998888 88987 55555555544433
No 161
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=92.62 E-value=0.074 Score=46.43 Aligned_cols=47 Identities=6% Similarity=-0.146 Sum_probs=32.1
Q ss_pred hccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcc
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIV 241 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~ 241 (272)
+++.+.|.|+++|..|.+||+..- .+-+.-+-..-++.++|++-|-=
T Consensus 217 i~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHND 264 (300)
T KOG4391|consen 217 IGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHND 264 (300)
T ss_pred hccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCc
Confidence 456788999999999999988764 33222122334567777777753
No 162
>COG0400 Predicted esterase [General function prediction only]
Probab=92.61 E-value=0.31 Score=42.18 Aligned_cols=48 Identities=23% Similarity=0.315 Sum_probs=36.9
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCC--CeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 45 GVDVMGERLAQEVLEVIERKRNL--RKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~--~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
+++.-...+++.|.++.+ ..++ ++++++|+|-|+.|+ .++...+|..+
T Consensus 75 dl~~~~~~~~~~l~~~~~-~~gi~~~~ii~~GfSqGA~ia-l~~~l~~~~~~ 124 (207)
T COG0400 75 DLDLETEKLAEFLEELAE-EYGIDSSRIILIGFSQGANIA-LSLGLTLPGLF 124 (207)
T ss_pred hHHHHHHHHHHHHHHHHH-HhCCChhheEEEecChHHHHH-HHHHHhCchhh
Confidence 444455777888888877 5665 899999999999999 66767677654
No 163
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=92.46 E-value=0.19 Score=54.20 Aligned_cols=39 Identities=15% Similarity=0.259 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhc
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLY 90 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~ 90 (272)
+.+|+++.+.+++.....+++++||||||.|+ +.++...
T Consensus 1116 ~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA-~e~A~~l 1154 (1296)
T PRK10252 1116 DEVCEAHLATLLEQQPHGPYHLLGYSLGGTLA-QGIAARL 1154 (1296)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEechhhHHH-HHHHHHH
Confidence 56677777777732334589999999999999 6666643
No 164
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=92.30 E-value=0.17 Score=47.67 Aligned_cols=25 Identities=24% Similarity=0.355 Sum_probs=20.5
Q ss_pred CCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 67 LRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 67 ~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
.++|-++|+||||+.+ +.++-+-+.
T Consensus 225 ~~RIG~~GfSmGg~~a-~~LaALDdR 249 (390)
T PF12715_consen 225 PDRIGCMGFSMGGYRA-WWLAALDDR 249 (390)
T ss_dssp EEEEEEEEEGGGHHHH-HHHHHH-TT
T ss_pred ccceEEEeecccHHHH-HHHHHcchh
Confidence 4699999999999999 888876544
No 165
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=92.14 E-value=1.2 Score=38.81 Aligned_cols=55 Identities=18% Similarity=0.192 Sum_probs=37.8
Q ss_pred cCCccEEEEecCCCeeecceec--c--ccccCCCCCCcccccCCCCCcccc-cCCccCCch
Q 024115 197 AFKRRVAYSNACYDHIVGWRTS--S--IRRNSELPKWEDSLDEKYPHIVHH-EHCKACDAE 252 (272)
Q Consensus 197 ~f~~p~L~~~g~~D~iVP~~sa--~--l~~~~~ip~a~l~i~~~~~H~~~~-e~p~~v~~~ 252 (272)
..+.|.||+-.+.|.++|++.- . .+..+..+ .+...+++.+|+.|. ++|+++.+.
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~-V~~~~f~~S~HV~H~r~~p~~Y~~~ 235 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWD-VRAEKFEDSPHVAHLRKHPDRYWRA 235 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCe-EEEecCCCCchhhhcccCHHHHHHH
Confidence 4457899999999999999854 1 12222344 667778999999865 456555443
No 166
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.41 E-value=0.37 Score=46.90 Aligned_cols=41 Identities=29% Similarity=0.391 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
-+..|+.||+-+.. +..|.++|+|||+|+|.-|.-+.+..+
T Consensus 428 a~kaG~lLAe~L~~---r~qG~RPVTLVGFSLGARvIf~CL~~L 468 (633)
T KOG2385|consen 428 ADKAGELLAEALCK---RSQGNRPVTLVGFSLGARVIFECLLEL 468 (633)
T ss_pred HHHHHHHHHHHHHH---hccCCCceeEeeeccchHHHHHHHHHH
Confidence 34445555554433 245889999999999999883344433
No 167
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=91.13 E-value=0.46 Score=41.24 Aligned_cols=49 Identities=14% Similarity=-0.010 Sum_probs=33.6
Q ss_pred HhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCccccc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHE 244 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e 244 (272)
.+...+.++|++.+++|.-.=++.. .++. .+..++...+++++|---.|
T Consensus 202 ~~~~v~~~ilVv~~~~espklieQnrdf~~--q~~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 202 EYTDVTVWILVVAAEHESPKLIEQNRDFAD--QLRKASFTLFKNYDHYDIIE 251 (270)
T ss_pred HhcCceeeeeEeeecccCcHHHHhhhhHHH--HhhhcceeecCCcchhhHHH
Confidence 3456788899999988876555554 3333 24568888899999865443
No 168
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.04 E-value=0.55 Score=40.64 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=22.8
Q ss_pred HHHHHHHhcCCCeEEEEEechhHHHHHHHHHh
Q 024115 57 VLEVIERKRNLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 57 v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
....|++..+-++++|+|||.|+.+.+..|..
T Consensus 84 F~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 84 FDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 44445533456799999999999977665654
No 169
>COG0627 Predicted esterase [General function prediction only]
Probab=90.61 E-value=0.33 Score=44.77 Aligned_cols=44 Identities=20% Similarity=0.108 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhcCC----CeEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 51 ERLAQEVLEVIERKRNL----RKISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~----~~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
.-+.+|+-.+++++... ++-.++||||||.=| +.++..+|+++.
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GA-l~lA~~~pd~f~ 178 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGA-LKLALKHPDRFK 178 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhh-hhhhhhCcchhc
Confidence 55677888777744432 279999999999977 667888887664
No 170
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=89.61 E-value=0.08 Score=49.92 Aligned_cols=91 Identities=31% Similarity=0.379 Sum_probs=58.9
Q ss_pred cccceeEEecCCCCCCCCCCCcccchhhhHHHHHHHHHHHHHHhhcccchhccCCC------CC---chhhHhhhccCCc
Q 024115 117 LEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAANFVIHLIFRRTGRHLFLNDND------EG---RPPLLRRMVEDED 187 (272)
Q Consensus 117 ~~~~~~v~~atP~~G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~s~~~l~l~d~~------~~---~~~~L~~l~~~~~ 187 (272)
..+..|+++++|++|..... |.... . .+....++.+|+.+.+.-.. .. ....+..+ .
T Consensus 182 v~p~~fitlasp~~gIagle--P~yii-----~---~at~~~LG~tG~kq~l~~~g~~~~e~~a~~~~~~~l~~L----~ 247 (405)
T KOG4372|consen 182 VEPVNFITLASPKLGIAGLE--PMYII-----T---LATPGHLGRTGQKQVLFLFGLTFLEKLAANISKRTLEHL----F 247 (405)
T ss_pred cCcchhhhhcCCCccccccC--chhhh-----h---hhcHHHHhhhcccccccccCCcchhhhcccccchhhhhh----c
Confidence 35779999999999987633 33221 1 11122456676655443111 00 02334444 3
Q ss_pred chHHHHHhccCCccEEEEecCCCeeecceecccc
Q 024115 188 ENYFMSALCAFKRRVAYSNACYDHIVGWRTSSIR 221 (272)
Q Consensus 188 ~~d~~~~L~~f~~p~L~~~g~~D~iVP~~sa~l~ 221 (272)
..+..+.+..|+.+++|.+-.+|.+||..++.+.
T Consensus 248 ~~d~~~~l~~fkrR~~~an~~nd~Ival~t~~~~ 281 (405)
T KOG4372|consen 248 LADLKEVLPPFKRRMAYANEDNDFIVALYTAALL 281 (405)
T ss_pred cCchhhhhhHHHHHHHhhccccccchhhHHHHHH
Confidence 3478889999999999999999999999999553
No 171
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=89.19 E-value=0.73 Score=41.96 Aligned_cols=51 Identities=25% Similarity=0.225 Sum_probs=38.6
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhcC----CCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 43 LDGVDVMGERLAQEVLEVIERKRN----LRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 43 ~~g~~~~~~~lA~~v~~ll~~~~~----~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
+...+..-+.++++|.-.+++... ...=.|.|-||||+++ ++.+..||+.+
T Consensus 148 ~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vs-L~agl~~Pe~F 202 (299)
T COG2382 148 LHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVS-LYAGLRHPERF 202 (299)
T ss_pred hcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHH-HHHHhcCchhh
Confidence 334444557889999999986433 2456899999999999 77888899876
No 172
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=89.09 E-value=0.77 Score=40.34 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=39.0
Q ss_pred hhhhhhhccCCcce-EE-EEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhcC----CCeEEEEEechhHH-HHHHHHH
Q 024115 15 LVQYWCLSFHNICW-IH-FVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKRN----LRKISFVAHSVGGL-VARYAIG 87 (272)
Q Consensus 15 ~~~~~~~~~~~~~~-~~-~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~~----~~~i~lVGHSmGG~-VaR~al~ 87 (272)
......++.|++.| +. ...+.+..|+-|+. + ++=++|+..+++ |.+ -.+|+++|||-|.. |. |++.
T Consensus 54 y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s----l-k~D~edl~~l~~-Hi~~~~fSt~vVL~GhSTGcQdi~-yYlT 126 (299)
T KOG4840|consen 54 YTTMLNRYLDENSWSLVQPQLRSSYNGYGTFS----L-KDDVEDLKCLLE-HIQLCGFSTDVVLVGHSTGCQDIM-YYLT 126 (299)
T ss_pred cHHHHHHHHhhccceeeeeecccccccccccc----c-cccHHHHHHHHH-HhhccCcccceEEEecCccchHHH-HHHH
Confidence 33444456676667 22 22233333322322 3 455678888887 543 24899999999999 66 7773
No 173
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=88.92 E-value=1.6 Score=38.23 Aligned_cols=45 Identities=18% Similarity=0.127 Sum_probs=30.1
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
++....+.|.+.|.+... .-++++++|+|+|+.|+..++.++...
T Consensus 28 Sv~~G~~~L~~ai~~~~~---~~~~vvV~GySQGA~Va~~~~~~l~~~ 72 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIA---AGGPVVVFGYSQGAVVASNVLRRLAAD 72 (225)
T ss_pred HHHHHHHHHHHHHHhhcc---CCCCEEEEEECHHHHHHHHHHHHHHhc
Confidence 444444444444444333 447899999999999998888776553
No 174
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=88.79 E-value=1.1 Score=42.90 Aligned_cols=50 Identities=16% Similarity=0.112 Sum_probs=36.1
Q ss_pred HhccCC-ccEEEEecCCCeeecceec-cccc-cCCCCC--CcccccCCCCCcccc
Q 024115 194 ALCAFK-RRVAYSNACYDHIVGWRTS-SIRR-NSELPK--WEDSLDEKYPHIVHH 243 (272)
Q Consensus 194 ~L~~f~-~p~L~~~g~~D~iVP~~sa-~l~~-~~~ip~--a~l~i~~~~~H~~~~ 243 (272)
.|++|+ +|+|.+.|+.|.|||+.++ .... ...+|. -+..+.+++||....
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf 386 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVF 386 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEe
Confidence 578999 9999999999999999998 3322 112443 235566799998644
No 175
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=88.58 E-value=1 Score=43.67 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=40.4
Q ss_pred CccEEEEecCCCeeecceec--cc---c--c------c----------------CCCC-----CCcccccCCCCCccccc
Q 024115 199 KRRVAYSNACYDHIVGWRTS--SI---R--R------N----------------SELP-----KWEDSLDEKYPHIVHHE 244 (272)
Q Consensus 199 ~~p~L~~~g~~D~iVP~~sa--~l---~--~------~----------------~~ip-----~a~l~i~~~~~H~~~~e 244 (272)
..++|+.+|+.|.+||+-.. .+ . . + +... +.+.+.+.++||+++.+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 47999999999999988543 11 0 0 0 0112 45556677999999999
Q ss_pred CCccCCchhhcc
Q 024115 245 HCKACDAEQLDI 256 (272)
Q Consensus 245 ~p~~v~~~~~~~ 256 (272)
+|++....+.+.
T Consensus 444 ~P~~~~~~i~~f 455 (462)
T PTZ00472 444 QPAVALTMINRF 455 (462)
T ss_pred HHHHHHHHHHHH
Confidence 999987766554
No 176
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=84.91 E-value=1.6 Score=36.72 Aligned_cols=41 Identities=12% Similarity=0.055 Sum_probs=28.0
Q ss_pred ccEEEEecCCCeeecceec---cccccCCCCCCcccccCCCCCccc
Q 024115 200 RRVAYSNACYDHIVGWRTS---SIRRNSELPKWEDSLDEKYPHIVH 242 (272)
Q Consensus 200 ~p~L~~~g~~D~iVP~~sa---~l~~~~~ip~a~l~i~~~~~H~~~ 242 (272)
.|+++.+|..|.+++.... .+.. ..+ ..+++++++.+|...
T Consensus 167 Pp~~i~~g~~D~l~~~~~~~~~~L~~-~gv-~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVDDSLRFAEKLKK-AGV-DVELHVYPGMPHGFF 210 (211)
T ss_dssp HEEEEEEETTSTTHHHHHHHHHHHHH-TT--EEEEEEETTEETTGG
T ss_pred CCeeeeccccccchHHHHHHHHHHHH-CCC-CEEEEEECCCeEEee
Confidence 4899999999998754333 2222 122 468899999999764
No 177
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=84.17 E-value=2 Score=39.09 Aligned_cols=28 Identities=25% Similarity=0.332 Sum_probs=21.6
Q ss_pred hcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 64 KRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 64 ~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
...-.+|-+-|||+||-+| ..+...++-
T Consensus 272 ~Ypda~iwlTGHSLGGa~A-sLlG~~fgl 299 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIA-SLLGIRFGL 299 (425)
T ss_pred hCCCceEEEeccccchHHH-HHhccccCC
Confidence 4455799999999999999 556665543
No 178
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=84.17 E-value=2 Score=39.09 Aligned_cols=28 Identities=25% Similarity=0.332 Sum_probs=21.6
Q ss_pred hcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 64 KRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 64 ~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
...-.+|-+-|||+||-+| ..+...++-
T Consensus 272 ~Ypda~iwlTGHSLGGa~A-sLlG~~fgl 299 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIA-SLLGIRFGL 299 (425)
T ss_pred hCCCceEEEeccccchHHH-HHhccccCC
Confidence 4455799999999999999 556665543
No 179
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=83.68 E-value=2.8 Score=35.86 Aligned_cols=38 Identities=16% Similarity=0.267 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
..+++-|..+.+ +-+.+++.|||+|+|.=|.=..+.++
T Consensus 52 ~Dl~~~i~~y~~-~w~~~~vvLiGYSFGADvlP~~~nrL 89 (192)
T PF06057_consen 52 ADLARIIRHYRA-RWGRKRVVLIGYSFGADVLPFIYNRL 89 (192)
T ss_pred HHHHHHHHHHHH-HhCCceEEEEeecCCchhHHHHHhhC
Confidence 444444444444 46889999999999997663555553
No 180
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=83.30 E-value=5.4 Score=37.24 Aligned_cols=23 Identities=35% Similarity=0.475 Sum_probs=18.5
Q ss_pred CCCeEEEEEechhHHHHHHHHHh
Q 024115 66 NLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 66 ~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
+.+.|.+-|||+||.|+-.++..
T Consensus 213 ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 213 KAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred ChheEEEeeccccHHHHHHHHHh
Confidence 44899999999999998565543
No 181
>KOG3101 consensus Esterase D [General function prediction only]
Probab=82.42 E-value=0.88 Score=39.71 Aligned_cols=51 Identities=18% Similarity=0.154 Sum_probs=32.8
Q ss_pred CCCcHHHHHHHHHHHHHHHHHH---hcCCCeEEEEEechhHHHHHHHHHhhcCCC
Q 024115 42 TLDGVDVMGERLAQEVLEVIER---KRNLRKISFVAHSVGGLVARYAIGKLYRPP 93 (272)
Q Consensus 42 t~~g~~~~~~~lA~~v~~ll~~---~~~~~~i~lVGHSmGG~VaR~al~~l~~~~ 93 (272)
+|.-...|-+-+.+|+.+++.. .++..++.+-||||||.=| +.++.+.+.+
T Consensus 112 pw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGA-l~~~Lkn~~k 165 (283)
T KOG3101|consen 112 PWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGA-LTIYLKNPSK 165 (283)
T ss_pred hHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCce-EEEEEcCccc
Confidence 4444233446777777777762 1345689999999999855 4445555554
No 182
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=81.35 E-value=1.8 Score=38.83 Aligned_cols=22 Identities=36% Similarity=0.685 Sum_probs=18.1
Q ss_pred CCCeEEEEEechhHHHHHHHHHh
Q 024115 66 NLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 66 ~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
+..++.+.|||-||-++ .+++.
T Consensus 89 D~s~l~l~GHSrGGk~A-f~~al 110 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVA-FAMAL 110 (259)
T ss_pred cccceEEeeeCCCCHHH-HHHHh
Confidence 56799999999999988 54544
No 183
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=81.11 E-value=1.8 Score=41.33 Aligned_cols=63 Identities=13% Similarity=0.014 Sum_probs=41.1
Q ss_pred HhccCCccEEEEecCCCeeecceecc-ccccCCCCCCcccc---cCCCCCccc---ccCCccCCchhhcccc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTSS-IRRNSELPKWEDSL---DEKYPHIVH---HEHCKACDAEQLDISS 258 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa~-l~~~~~ip~a~l~i---~~~~~H~~~---~e~p~~v~~~~~~~~~ 258 (272)
.|..++.|+.+..|++|.++.++.-. +.. ..|++.... .+.+.|+=+ .+.++.|++..++.+.
T Consensus 327 ~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~--~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~ 396 (403)
T KOG2624|consen 327 DLTNIKVPTALYYGDNDWLADPEDVLILLL--VLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLR 396 (403)
T ss_pred CccccccCEEEEecCCcccCCHHHHHHHHH--hcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHH
Confidence 45677899999999999998776652 332 244444322 689999754 3446666666665554
No 184
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=78.37 E-value=1.3 Score=38.69 Aligned_cols=49 Identities=16% Similarity=0.036 Sum_probs=38.5
Q ss_pred hccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCC
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHC 246 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p 246 (272)
.+.+++|+|-+-|+.|.+||...| .+.. ..+++ +++...+||.++-.++
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~--~~~~a-~vl~HpggH~VP~~~~ 208 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAE--SFKDA-TVLEHPGGHIVPNKAK 208 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHH--hcCCC-eEEecCCCccCCCchH
Confidence 346889999999999999999977 5655 47778 5555677899987663
No 185
>COG4099 Predicted peptidase [General function prediction only]
Probab=75.88 E-value=7.6 Score=35.73 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHhcCC--CeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 51 ERLAQEVLEVIERKRNL--RKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~--~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
...-+-+.+++.++.++ .+|-++|.|+||+-+ +++...+|+.+
T Consensus 250 ~~~idli~~vlas~ynID~sRIYviGlSrG~~gt-~al~~kfPdfF 294 (387)
T COG4099 250 IEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGT-WALAEKFPDFF 294 (387)
T ss_pred HHHHHHHHHHHhhccCcccceEEEEeecCcchhh-HHHHHhCchhh
Confidence 33445555455545554 589999999999988 77777788754
No 186
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=74.34 E-value=4.2 Score=42.02 Aligned_cols=49 Identities=14% Similarity=0.102 Sum_probs=37.1
Q ss_pred HhccCCccE-EEEecCCCeeecceec-ccc---ccCCCCCCcccccCCCCCcccc
Q 024115 194 ALCAFKRRV-AYSNACYDHIVGWRTS-SIR---RNSELPKWEDSLDEKYPHIVHH 243 (272)
Q Consensus 194 ~L~~f~~p~-L~~~g~~D~iVP~~sa-~l~---~~~~ip~a~l~i~~~~~H~~~~ 243 (272)
.+..++.|. |+++|..|.-|+++.| .+. ..+.+| .++.+||+-.|.+-.
T Consensus 676 ~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~-~~~~vypde~H~is~ 729 (755)
T KOG2100|consen 676 PANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVP-FRLLVYPDENHGISY 729 (755)
T ss_pred hhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc-eEEEEeCCCCccccc
Confidence 455666666 9999999999998877 222 223677 899999999998854
No 187
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=73.42 E-value=8.3 Score=33.32 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHh----cCCCeEEEEEechhHHHHHHHHHhhcCCC
Q 024115 51 ERLAQEVLEVIERK----RNLRKISFVAHSVGGLVARYAIGKLYRPP 93 (272)
Q Consensus 51 ~~lA~~v~~ll~~~----~~~~~i~lVGHSmGG~VaR~al~~l~~~~ 93 (272)
++-++-+..++++. ....+|.+-|.||||.++ ++.+..++..
T Consensus 72 ~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~a-L~~~~~~~~~ 117 (206)
T KOG2112|consen 72 HRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALA-LYSALTYPKA 117 (206)
T ss_pred HHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHH-HHHHhccccc
Confidence 45556666666532 234689999999999999 6677766543
No 188
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=72.86 E-value=7.4 Score=35.12 Aligned_cols=49 Identities=14% Similarity=0.047 Sum_probs=32.8
Q ss_pred hccCCccEEEEecCCCeeecceec---cccccCCCCCCcccccCCCCCcccccCC
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS---SIRRNSELPKWEDSLDEKYPHIVHHEHC 246 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa---~l~~~~~ip~a~l~i~~~~~H~~~~e~p 246 (272)
+.. -.|+++.++..|.+.+-..+ .++++ .++. ++..+++..|.+..-..
T Consensus 242 ~~~-lPP~~i~~a~~D~l~~~~~~~a~~L~~a-gv~~-~~~~~~g~~H~f~~~~~ 293 (312)
T COG0657 242 LSG-LPPTLIQTAEFDPLRDEGEAYAERLRAA-GVPV-ELRVYPGMIHGFDLLTG 293 (312)
T ss_pred ccC-CCCEEEEecCCCcchhHHHHHHHHHHHc-CCeE-EEEEeCCcceeccccCc
Confidence 445 56799999999999982222 22322 3444 78999999997754443
No 189
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=71.35 E-value=2.9 Score=39.54 Aligned_cols=20 Identities=40% Similarity=0.625 Sum_probs=15.8
Q ss_pred CCeEEEEEechhHHHHHHHH
Q 024115 67 LRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 67 ~~~i~lVGHSmGG~VaR~al 86 (272)
..+|.++|||+||-.+=.++
T Consensus 227 ~~~i~~~GHSFGGATa~~~l 246 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATALQAL 246 (379)
T ss_dssp EEEEEEEEETHHHHHHHHHH
T ss_pred hhheeeeecCchHHHHHHHH
Confidence 56899999999999662433
No 190
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=67.97 E-value=2.5 Score=36.61 Aligned_cols=57 Identities=12% Similarity=-0.015 Sum_probs=37.9
Q ss_pred HHHHhccCC-ccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccCCc
Q 024115 191 FMSALCAFK-RRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEHCK 247 (272)
Q Consensus 191 ~~~~L~~f~-~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~p~ 247 (272)
-...+.++. .|+|+++|..|.+||...+ .+-....-......++++++|......+.
T Consensus 223 ~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 281 (299)
T COG1073 223 PFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPP 281 (299)
T ss_pred chhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccH
Confidence 344566666 7999999999999998887 22221111135677778888887763333
No 191
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=67.56 E-value=2.5 Score=40.33 Aligned_cols=56 Identities=14% Similarity=0.067 Sum_probs=35.1
Q ss_pred EEEccCCCCCCCC-CCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHh
Q 024115 30 HFVGSERNMSKLT-LDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 30 ~~~~s~~n~~~~t-~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
.|+.+=.|....+ .++--.+ +.+.+.|.+.++ +.+.+ ++++|++|||..+-.+++.
T Consensus 132 VYl~DW~~p~~vp~~~~~f~l-dDYi~~l~~~i~-~~G~~-v~l~GvCqgG~~~laa~Al 188 (406)
T TIGR01849 132 VYITDWVNARMVPLSAGKFDL-EDYIDYLIEFIR-FLGPD-IHVIAVCQPAVPVLAAVAL 188 (406)
T ss_pred EEEEeCCCCCCCchhcCCCCH-HHHHHHHHHHHH-HhCCC-CcEEEEchhhHHHHHHHHH
Confidence 5666655555332 1222223 444567888887 67766 9999999999976344544
No 192
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=66.28 E-value=12 Score=35.62 Aligned_cols=27 Identities=19% Similarity=0.050 Sum_probs=23.1
Q ss_pred CeEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 68 RKISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 68 ~~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
-+++.+|+|-||+++ +.+++..|..+.
T Consensus 184 lp~I~~G~s~G~yla-~l~~k~aP~~~~ 210 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLA-HLCAKIAPWLFD 210 (403)
T ss_pred CcEEEEecCcHHHHH-HHHHhhCcccee
Confidence 389999999999999 878888887654
No 193
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=65.91 E-value=33 Score=33.99 Aligned_cols=48 Identities=23% Similarity=0.213 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhcCCCC
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLYRPPK 94 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~~~~~ 94 (272)
+.......+..|.++.+.+++..|..+||...||--+ +.++-++|+.+
T Consensus 118 l~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~-~mlAA~~Pd~~ 165 (581)
T PF11339_consen 118 LEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAA-MMLAALRPDLV 165 (581)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHH-HHHHhcCcCcc
Confidence 4334477888888888877777799999999999977 55666688764
No 194
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=64.38 E-value=7.9 Score=34.57 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=21.5
Q ss_pred HHHHHHhcCCCeEEEEEechhHHHHHHHHH
Q 024115 58 LEVIERKRNLRKISFVAHSVGGLVARYAIG 87 (272)
Q Consensus 58 ~~ll~~~~~~~~i~lVGHSmGG~VaR~al~ 87 (272)
.+++. ..++++-.++|||+|-+.| .+++
T Consensus 73 ~~~l~-~~Gi~p~~~~GhSlGE~aA-~~~a 100 (298)
T smart00827 73 ARLWR-SWGVRPDAVVGHSLGEIAA-AYVA 100 (298)
T ss_pred HHHHH-HcCCcccEEEecCHHHHHH-HHHh
Confidence 34455 5789999999999999988 4443
No 195
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=62.69 E-value=10 Score=37.99 Aligned_cols=48 Identities=15% Similarity=0.119 Sum_probs=33.4
Q ss_pred cCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccC
Q 024115 197 AFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEH 245 (272)
Q Consensus 197 ~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~ 245 (272)
..+.|+|++.|.+|...+...- .++.. --...+++++.++.|-+-+..
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreK-MqA~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREK-MQAEVELHVIGGADHSMAIPK 350 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHH-hhccceEEEecCCCccccCCc
Confidence 4567899999999998877765 34321 123456888889988876654
No 196
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=62.41 E-value=6.5 Score=34.58 Aligned_cols=50 Identities=12% Similarity=-0.047 Sum_probs=37.0
Q ss_pred HhccCCccEEEEecCCCeeecceec-cc----cccCCCCCCcccccCCCCCccccc
Q 024115 194 ALCAFKRRVAYSNACYDHIVGWRTS-SI----RRNSELPKWEDSLDEKYPHIVHHE 244 (272)
Q Consensus 194 ~L~~f~~p~L~~~g~~D~iVP~~sa-~l----~~~~~ip~a~l~i~~~~~H~~~~e 244 (272)
.....++|+|++.++.|.++|+..- .+ ... .--++++.++++-+|+...-
T Consensus 159 D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~-~~~~~~v~~f~g~~HGf~~~ 213 (242)
T KOG3043|consen 159 DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKEN-PAVGSQVKTFSGVGHGFVAR 213 (242)
T ss_pred HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcC-cccceeEEEcCCccchhhhh
Confidence 4567889999999999999998754 22 222 12226789999999998863
No 197
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=60.27 E-value=7.1 Score=35.58 Aligned_cols=28 Identities=14% Similarity=0.340 Sum_probs=21.8
Q ss_pred HHHHHHHhcCCCeEEEEEechhHHHHHHHH
Q 024115 57 VLEVIERKRNLRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 57 v~~ll~~~~~~~~i~lVGHSmGG~VaR~al 86 (272)
+.++++ ..++++-.++|||+|=+.| +++
T Consensus 74 l~~~l~-~~Gi~P~~v~GhSlGE~aA-~~a 101 (318)
T PF00698_consen 74 LARLLR-SWGIKPDAVIGHSLGEYAA-LVA 101 (318)
T ss_dssp HHHHHH-HTTHCESEEEESTTHHHHH-HHH
T ss_pred hhhhhc-ccccccceeeccchhhHHH-HHH
Confidence 345555 6789999999999999988 444
No 198
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=59.72 E-value=10 Score=33.68 Aligned_cols=28 Identities=18% Similarity=0.209 Sum_probs=20.5
Q ss_pred HHHHHHhcC-CCeEEEEEechhHHHHHHHHH
Q 024115 58 LEVIERKRN-LRKISFVAHSVGGLVARYAIG 87 (272)
Q Consensus 58 ~~ll~~~~~-~~~i~lVGHSmGG~VaR~al~ 87 (272)
.+++. ..+ +.+..++|||+|=+.| .+++
T Consensus 73 ~~~l~-~~g~i~p~~v~GhS~GE~aA-a~~a 101 (290)
T TIGR00128 73 YLKLK-EQGGLKPDFAAGHSLGEYSA-LVAA 101 (290)
T ss_pred HHHHH-HcCCCCCCEEeecCHHHHHH-HHHh
Confidence 34444 456 8999999999999887 4443
No 199
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=59.35 E-value=11 Score=33.77 Aligned_cols=24 Identities=21% Similarity=0.109 Sum_probs=19.5
Q ss_pred HHHHHHhcCCCeEEEEEechhHHHH
Q 024115 58 LEVIERKRNLRKISFVAHSVGGLVA 82 (272)
Q Consensus 58 ~~ll~~~~~~~~i~lVGHSmGG~Va 82 (272)
.++++ ..++++..++|||+|=+.|
T Consensus 67 ~~~l~-~~g~~P~~v~GhS~GE~aA 90 (295)
T TIGR03131 67 WRALL-ALLPRPSAVAGYSVGEYAA 90 (295)
T ss_pred HHHHH-hcCCCCcEEeecCHHHHHH
Confidence 44455 5788999999999999887
No 200
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=53.22 E-value=28 Score=31.04 Aligned_cols=48 Identities=21% Similarity=0.317 Sum_probs=25.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHHH---hcCC----CeEEEEEechhHHHHHHHHHhhcC
Q 024115 42 TLDGVDVMGERLAQEVLEVIER---KRNL----RKISFVAHSVGGLVARYAIGKLYR 91 (272)
Q Consensus 42 t~~g~~~~~~~lA~~v~~ll~~---~~~~----~~i~lVGHSmGG~VaR~al~~l~~ 91 (272)
|+|-.. .|+.+.+.....++. ..+. -++.=||||||+.+- ..+.-+++
T Consensus 58 tfDH~~-~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklh-lLi~s~~~ 112 (250)
T PF07082_consen 58 TFDHQA-IAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLH-LLIGSLFD 112 (250)
T ss_pred CCcHHH-HHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHH-HHHhhhcc
Confidence 566544 335554444443331 1122 245669999999866 44544444
No 201
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=53.16 E-value=18 Score=31.10 Aligned_cols=43 Identities=28% Similarity=0.329 Sum_probs=27.6
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHhc---CCCeEEEEEechhHH
Q 024115 38 MSKLTLDGVDVMGERLAQEVLEVIERKR---NLRKISFVAHSVGGL 80 (272)
Q Consensus 38 ~~~~t~~g~~~~~~~lA~~v~~ll~~~~---~~~~i~lVGHSmGG~ 80 (272)
.+.....|....+..+++++.+.|++.. +--+..+|-|||||.
T Consensus 91 ~g~n~~~G~~~~~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGG 136 (216)
T PF00091_consen 91 SGNNWAVGYYTFGEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGG 136 (216)
T ss_dssp STTSHHHHHHHHHHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSS
T ss_pred ccccccccccccccccccccccccchhhccccccccceecccccce
Confidence 3433345665555556666666665433 566889999999876
No 202
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=52.49 E-value=9.4 Score=31.50 Aligned_cols=48 Identities=25% Similarity=0.302 Sum_probs=27.7
Q ss_pred EEEEccCCCCCCCCCCcHHHHHHHHHHHH----HHHHHHh---cCCCeEEEEEechhHH
Q 024115 29 IHFVGSERNMSKLTLDGVDVMGERLAQEV----LEVIERK---RNLRKISFVAHSVGGL 80 (272)
Q Consensus 29 ~~~~~s~~n~~~~t~~g~~~~~~~lA~~v----~~ll~~~---~~~~~i~lVGHSmGG~ 80 (272)
++|+....| ..|+.|... +.||+.| ..+.+.. ...++|+|||.||+..
T Consensus 62 VGHG~~~~~--~~~l~g~~a--~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 62 VGHGRDEFN--NQTLAGYSA--DELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp E--EESSTS--SSEETTEEH--HHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEeCCCcCC--CceeCCCCH--HHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 456666333 257787653 7777777 4444421 1357999999999987
No 203
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=49.20 E-value=5.7 Score=38.58 Aligned_cols=41 Identities=15% Similarity=0.145 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHh--cCCCeEEEEEechhHHHHHHHHHhh
Q 024115 49 MGERLAQEVLEVIERK--RNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~--~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
.++.+.+-+..++++. ....++.++|||+||.++.....++
T Consensus 150 ~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 150 VSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred HHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHH
Confidence 3344444444444422 2358999999999999775655544
No 204
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=48.87 E-value=28 Score=33.30 Aligned_cols=42 Identities=19% Similarity=0.342 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHH---hcCCCeEEEEEechhHHHHHHHHHhhcCC
Q 024115 51 ERLAQEVLEVIER---KRNLRKISFVAHSVGGLVARYAIGKLYRP 92 (272)
Q Consensus 51 ~~lA~~v~~ll~~---~~~~~~i~lVGHSmGG~VaR~al~~l~~~ 92 (272)
+.+|+|+.++++. +-+.+++.|||+|.|.=|.=.+..++-|.
T Consensus 306 e~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~~ 350 (456)
T COG3946 306 EQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPPA 350 (456)
T ss_pred HHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCHH
Confidence 4556666666652 46889999999999998775666665544
No 205
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=47.83 E-value=6.7 Score=36.31 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=15.7
Q ss_pred CCeEEEEEechhHHHHHHHHH
Q 024115 67 LRKISFVAHSVGGLVARYAIG 87 (272)
Q Consensus 67 ~~~i~lVGHSmGG~VaR~al~ 87 (272)
-.+++++|||.||..+-...+
T Consensus 240 ~s~~aViGHSFGgAT~i~~ss 260 (399)
T KOG3847|consen 240 TSQAAVIGHSFGGATSIASSS 260 (399)
T ss_pred hhhhhheeccccchhhhhhhc
Confidence 357999999999996624343
No 206
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=47.64 E-value=59 Score=29.88 Aligned_cols=50 Identities=20% Similarity=0.212 Sum_probs=35.5
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhcCCC--eEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 43 LDGVDVMGERLAQEVLEVIERKRNLR--KISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 43 ~~g~~~~~~~lA~~v~~ll~~~~~~~--~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
..|++.. .-|++-|..++. ..+++ +|-+.|.|-||..+ ..++-.+|+.+.
T Consensus 119 ~~g~ddV-gflr~lva~l~~-~~gidp~RVyvtGlS~GG~Ma-~~lac~~p~~fa 170 (312)
T COG3509 119 RRGVDDV-GFLRALVAKLVN-EYGIDPARVYVTGLSNGGRMA-NRLACEYPDIFA 170 (312)
T ss_pred cCCccHH-HHHHHHHHHHHH-hcCcCcceEEEEeeCcHHHHH-HHHHhcCccccc
Confidence 3466665 556666666666 56665 99999999999977 555555788764
No 207
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=46.84 E-value=20 Score=31.53 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=13.9
Q ss_pred cCCCeEEEEEechhHH
Q 024115 65 RNLRKISFVAHSVGGL 80 (272)
Q Consensus 65 ~~~~~i~lVGHSmGG~ 80 (272)
.++..|.+.|||+|..
T Consensus 232 ~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 232 SDIDEIIIYGHSLGEV 247 (270)
T ss_pred cCCCEEEEEeCCCchh
Confidence 3578999999999987
No 208
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=46.43 E-value=19 Score=31.87 Aligned_cols=73 Identities=16% Similarity=0.103 Sum_probs=41.2
Q ss_pred hhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhc-CCCeEEEEEechhHHHHHHHHHhhcC
Q 024115 13 VKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVIERKR-NLRKISFVAHSVGGLVARYAIGKLYR 91 (272)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll~~~~-~~~~i~lVGHSmGG~VaR~al~~l~~ 91 (272)
+.++||-.+.+|.| +.+.|+.+.. ..+.... +.. .++.+-+.++. .-.+|-++|.|-+|..+ ++++...|
T Consensus 53 ~~~~GY~vV~~D~R---G~g~S~G~~~---~~~~~e~-~D~-~d~I~W~~~Qpws~G~VGm~G~SY~G~~q-~~~A~~~~ 123 (272)
T PF02129_consen 53 FAERGYAVVVQDVR---GTGGSEGEFD---PMSPNEA-QDG-YDTIEWIAAQPWSNGKVGMYGISYGGFTQ-WAAAARRP 123 (272)
T ss_dssp HHHTT-EEEEEE-T---TSTTS-S-B----TTSHHHH-HHH-HHHHHHHHHCTTEEEEEEEEEETHHHHHH-HHHHTTT-
T ss_pred HHhCCCEEEEECCc---ccccCCCccc---cCChhHH-HHH-HHHHHHHHhCCCCCCeEEeeccCHHHHHH-HHHHhcCC
Confidence 67788888888866 6677775433 1122221 222 33444444333 23599999999999999 66666455
Q ss_pred CCC
Q 024115 92 PPK 94 (272)
Q Consensus 92 ~~~ 94 (272)
+.+
T Consensus 124 p~L 126 (272)
T PF02129_consen 124 PHL 126 (272)
T ss_dssp TTE
T ss_pred CCc
Confidence 544
No 209
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=45.56 E-value=44 Score=30.08 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=32.9
Q ss_pred EEEEecCCCeeecceec-cccccCCCCCCccccc-CCCCCcccccCCccCCchhh
Q 024115 202 VAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLD-EKYPHIVHHEHCKACDAEQL 254 (272)
Q Consensus 202 ~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~-~~~~H~~~~e~p~~v~~~~~ 254 (272)
+-+--|..|+.||.+-. .+.. ++|.-++.+- ++-+|.+-+.+.+.-...+.
T Consensus 245 l~Fyygt~DgW~p~~~~d~~kd--d~~eed~~Ldedki~HAFV~~~~q~ma~~v~ 297 (301)
T KOG3975|consen 245 LWFYYGTNDGWVPSHYYDYYKD--DVPEEDLKLDEDKIPHAFVVKHAQYMANAVF 297 (301)
T ss_pred EEEEccCCCCCcchHHHHHHhh--hcchhceeeccccCCcceeecccHHHHHHHH
Confidence 33344569999997766 4443 5766554443 68899988877765544443
No 210
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=43.89 E-value=8.1 Score=36.10 Aligned_cols=59 Identities=17% Similarity=0.026 Sum_probs=0.0
Q ss_pred HHHHHhccCCccEEEEecCCCeeec------------------ceeccc-------cccCCCCCCcccccCCCCCccccc
Q 024115 190 YFMSALCAFKRRVAYSNACYDHIVG------------------WRTSSI-------RRNSELPKWEDSLDEKYPHIVHHE 244 (272)
Q Consensus 190 d~~~~L~~f~~p~L~~~g~~D~iVP------------------~~sa~l-------~~~~~ip~a~l~i~~~~~H~~~~e 244 (272)
...+.|=.-..++|+.+|..|.++| +..+.. .-.+...+-+.+.+.++||+++..
T Consensus 321 ~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~d 400 (415)
T PF00450_consen 321 PDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQD 400 (415)
T ss_dssp HHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHH
T ss_pred hhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhh
Q ss_pred CCcc
Q 024115 245 HCKA 248 (272)
Q Consensus 245 ~p~~ 248 (272)
+|++
T Consensus 401 qP~~ 404 (415)
T PF00450_consen 401 QPEA 404 (415)
T ss_dssp SHHH
T ss_pred CHHH
No 211
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=43.08 E-value=50 Score=31.75 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhc--CCCeEEEEEechhHHHH
Q 024115 52 RLAQEVLEVIERKR--NLRKISFVAHSVGGLVA 82 (272)
Q Consensus 52 ~lA~~v~~ll~~~~--~~~~i~lVGHSmGG~Va 82 (272)
...+.|.+.++ .. +.++|++.|||-||..+
T Consensus 159 ~al~wv~~~i~-~fggd~~~v~~~G~SaG~~~~ 190 (493)
T cd00312 159 LALKWVQDNIA-AFGGDPDSVTIFGESAGGASV 190 (493)
T ss_pred HHHHHHHHHHH-HhCCCcceEEEEeecHHHHHh
Confidence 33455666666 33 45699999999999976
No 212
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=42.82 E-value=43 Score=30.28 Aligned_cols=46 Identities=11% Similarity=-0.120 Sum_probs=32.4
Q ss_pred cCCccEEEEecCCCeeecceec-cccccCCCC---CCcccccCCCCCccc
Q 024115 197 AFKRRVAYSNACYDHIVGWRTS-SIRRNSELP---KWEDSLDEKYPHIVH 242 (272)
Q Consensus 197 ~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip---~a~l~i~~~~~H~~~ 242 (272)
..+.|+++.+|..|.+||+..+ .+...-.-. +.++..+++.+|...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 3468999999999999999987 332221222 345667788889864
No 213
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=41.54 E-value=29 Score=34.50 Aligned_cols=28 Identities=7% Similarity=-0.034 Sum_probs=21.5
Q ss_pred HHHHHHHhcCCCeEEEEEechhHHHHHH
Q 024115 57 VLEVIERKRNLRKISFVAHSVGGLVARY 84 (272)
Q Consensus 57 v~~ll~~~~~~~~i~lVGHSmGG~VaR~ 84 (272)
+.+++.+..++++-.++|||||=+.+=+
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~ 281 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWA 281 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHH
Confidence 3455533578999999999999998833
No 214
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=41.24 E-value=28 Score=33.87 Aligned_cols=52 Identities=13% Similarity=0.031 Sum_probs=35.8
Q ss_pred CCccEEEEecCCCeeecceec-c-cccc---------------CC-------CCCCcccccCCCCCcccccCCccC
Q 024115 198 FKRRVAYSNACYDHIVGWRTS-S-IRRN---------------SE-------LPKWEDSLDEKYPHIVHHEHCKAC 249 (272)
Q Consensus 198 f~~p~L~~~g~~D~iVP~~sa-~-l~~~---------------~~-------ip~a~l~i~~~~~H~~~~e~p~~v 249 (272)
-..|+|+-+|+.|.+||+-.. . +..- .. ..+.....+.|+||+++..+|++-
T Consensus 362 ~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~a 437 (454)
T KOG1282|consen 362 GGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESA 437 (454)
T ss_pred CceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHH
Confidence 447999999999999998766 2 1100 01 112223566799999999999865
No 215
>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=41.14 E-value=64 Score=29.46 Aligned_cols=36 Identities=25% Similarity=0.356 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHH
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGL 80 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~ 80 (272)
+....|+..|+++.+.+++.+.-.+..||-|||||.
T Consensus 62 ~~~~~G~~~a~e~~~~I~~~le~~D~v~i~aglGGG 97 (303)
T cd02191 62 ANPELGAEAAEEVQEAIDNIPVHVDMVFITAGLGGG 97 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEEeccCCc
Confidence 344567888888888887655557789999999975
No 216
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=39.39 E-value=47 Score=28.28 Aligned_cols=47 Identities=11% Similarity=-0.017 Sum_probs=25.0
Q ss_pred cCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcccccC
Q 024115 197 AFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIVHHEH 245 (272)
Q Consensus 197 ~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~~~e~ 245 (272)
+++.|+|-+.|.+|.++|.+.+ .+... ..+...++.-.+||.++...
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~--~~~~~~v~~h~gGH~vP~~~ 206 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEM--FDPDARVIEHDGGHHVPRKK 206 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHH--HHHHEEEEEESSSSS----H
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHh--ccCCcEEEEECCCCcCcCCh
Confidence 5688999999999999997766 44331 22213444456778887643
No 217
>TIGR00065 ftsZ cell division protein FtsZ. This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.
Probab=38.42 E-value=42 Score=31.38 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHH
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGL 80 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~ 80 (272)
....|+.+|++..+.+++.+.-.+..||-|||||.
T Consensus 80 ~~~~G~~~aee~~d~Ir~~le~~D~vfI~aglGGG 114 (349)
T TIGR00065 80 NPEIGRKAAEESRDEIRKLLEGADMVFITAGMGGG 114 (349)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCEEEEEEeccCc
Confidence 34467888888777777555556778999999983
No 218
>COG0400 Predicted esterase [General function prediction only]
Probab=38.07 E-value=8.1 Score=33.41 Aligned_cols=53 Identities=15% Similarity=0.027 Sum_probs=35.9
Q ss_pred ccCCccEEEEecCCCeeecceec-cccccC--CCCCCcccccCCCCCcccccCCccC
Q 024115 196 CAFKRRVAYSNACYDHIVGWRTS-SIRRNS--ELPKWEDSLDEKYPHIVHHEHCKAC 249 (272)
Q Consensus 196 ~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~--~ip~a~l~i~~~~~H~~~~e~p~~v 249 (272)
.....|+++++|..|.+||..-+ .+...- .--+.+...++ .||-+..|.-+++
T Consensus 143 ~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~ 198 (207)
T COG0400 143 DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPEELEAA 198 (207)
T ss_pred ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHH
Confidence 35677999999999999999877 332211 12234445556 8899887765554
No 219
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=38.00 E-value=16 Score=36.01 Aligned_cols=27 Identities=11% Similarity=0.023 Sum_probs=24.8
Q ss_pred HHHhccCCccEEEEecCCCeeecceec
Q 024115 192 MSALCAFKRRVAYSNACYDHIVGWRTS 218 (272)
Q Consensus 192 ~~~L~~f~~p~L~~~g~~D~iVP~~sa 218 (272)
.-+|++|++|+.+..+..|.|+|++.+
T Consensus 290 ~~DLr~Ir~Piivfas~gDnITPP~Qa 316 (581)
T PF11339_consen 290 RVDLRNIRSPIIVFASYGDNITPPQQA 316 (581)
T ss_pred EeehhhCCCCEEEEeccCCCCCChhHh
Confidence 347999999999999999999999998
No 220
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=36.84 E-value=3.8 Score=35.14 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHH
Q 024115 51 ERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIG 87 (272)
Q Consensus 51 ~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~ 87 (272)
+.-.+.|.+.+++ .+ .=.-++|+|.|+.+|=..+.
T Consensus 87 ~~sl~~l~~~i~~-~G-PfdGvlGFSQGA~lAa~ll~ 121 (212)
T PF03959_consen 87 DESLDYLRDYIEE-NG-PFDGVLGFSQGAALAALLLA 121 (212)
T ss_dssp HHHHHHHHHHHHH-H----SEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cC-CeEEEEeecHHHHHHHHHHH
Confidence 4455677777773 33 24569999999998734343
No 221
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=36.71 E-value=2e+02 Score=27.21 Aligned_cols=47 Identities=15% Similarity=-0.055 Sum_probs=34.6
Q ss_pred ccCCccEEEEecCCCeeecceeccccccCCCCCCc-ccccCCCCCcccc
Q 024115 196 CAFKRRVAYSNACYDHIVGWRTSSIRRNSELPKWE-DSLDEKYPHIVHH 243 (272)
Q Consensus 196 ~~f~~p~L~~~g~~D~iVP~~sa~l~~~~~ip~a~-l~i~~~~~H~~~~ 243 (272)
.+++.|.+++++-+|..-.+.++..- -+.+||.+ +.++|+++|..--
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y-~d~L~G~K~lr~vPN~~H~~~~ 306 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFY-YDKLPGEKYLRYVPNAGHSLIG 306 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHH-HhhCCCCeeEEeCCCCCcccch
Confidence 45688999999999998777776221 12478765 5667999998765
No 222
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain. This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.
Probab=36.35 E-value=46 Score=28.01 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEEechhH
Q 024115 49 MGERLAQEVLEVIERKRNLRKISFVAHSVGG 79 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG 79 (272)
.|+.+++++.+.+++...-.+..++=|||||
T Consensus 64 ~g~~~~~~~~~~ir~~le~~d~~~i~~slgG 94 (192)
T smart00864 64 VGREAAEESLDEIREELEGADGVFITAGMGG 94 (192)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeccCCC
Confidence 4677887777776654444588999999998
No 223
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=34.35 E-value=18 Score=25.98 Aligned_cols=42 Identities=12% Similarity=0.202 Sum_probs=28.6
Q ss_pred hhhhhhhhhhhccCCcceEEEEccCCCCCCCCCCcHHHHHHHHHHHHHHHH
Q 024115 11 LHVKLVQYWCLSFHNICWIHFVGSERNMSKLTLDGVDVMGERLAQEVLEVI 61 (272)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~s~~n~~~~t~~g~~~~~~~lA~~v~~ll 61 (272)
.++.++++.++++|-+ +++.|..+.+. .++ . +.+.+|+..++
T Consensus 37 ~~L~~~G~~V~~~D~r---GhG~S~g~rg~--~~~---~-~~~v~D~~~~~ 78 (79)
T PF12146_consen 37 EFLAEQGYAVFAYDHR---GHGRSEGKRGH--IDS---F-DDYVDDLHQFI 78 (79)
T ss_pred HHHHhCCCEEEEECCC---cCCCCCCcccc--cCC---H-HHHHHHHHHHh
Confidence 4567789999999976 89999855441 222 2 55667777665
No 224
>PRK09330 cell division protein FtsZ; Validated
Probab=34.29 E-value=57 Score=31.02 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=27.9
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHH
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGL 80 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~ 80 (272)
+....|+..|++..+.+++.+.-.+..||-|+|||.
T Consensus 75 ~~pe~G~~aaee~~e~I~~~l~~~D~vfI~AGmGGG 110 (384)
T PRK09330 75 ANPEVGRKAAEESREEIREALEGADMVFITAGMGGG 110 (384)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEEecCCCc
Confidence 344467888888877777666667888999999975
No 225
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=33.08 E-value=39 Score=29.38 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=16.8
Q ss_pred CCCeEEEEEechhHHHHHHHH
Q 024115 66 NLRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 66 ~~~~i~lVGHSmGG~VaR~al 86 (272)
+-++|+|||+|||=.+|...+
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l 75 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVL 75 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHh
Confidence 457999999999988884444
No 226
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=32.86 E-value=31 Score=31.59 Aligned_cols=52 Identities=10% Similarity=-0.095 Sum_probs=33.2
Q ss_pred CccEEEEecCCCeeecceec-ccccc----------------------CCCCC-CcccccCCCCCcccccCCccCCc
Q 024115 199 KRRVAYSNACYDHIVGWRTS-SIRRN----------------------SELPK-WEDSLDEKYPHIVHHEHCKACDA 251 (272)
Q Consensus 199 ~~p~L~~~g~~D~iVP~~sa-~l~~~----------------------~~ip~-a~l~i~~~~~H~~~~e~p~~v~~ 251 (272)
..++|+-+|+.|.+||+-.. ..... +...+ -+.+.+.++||+++ .+|++...
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~ 308 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFI 308 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHH
Confidence 46999999999999988544 11000 01122 44556679999997 47776543
No 227
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=32.79 E-value=1.5e+02 Score=28.09 Aligned_cols=28 Identities=18% Similarity=-0.050 Sum_probs=21.7
Q ss_pred CCeEEEEEechhHHHHHHHHHhhcCCCCc
Q 024115 67 LRKISFVAHSVGGLVARYAIGKLYRPPKI 95 (272)
Q Consensus 67 ~~~i~lVGHSmGG~VaR~al~~l~~~~~~ 95 (272)
-.+++++|=|-||.++ .++..+||+.+.
T Consensus 112 ~~pwI~~GgSY~G~La-aw~r~kyP~~~~ 139 (434)
T PF05577_consen 112 NSPWIVFGGSYGGALA-AWFRLKYPHLFD 139 (434)
T ss_dssp C--EEEEEETHHHHHH-HHHHHH-TTT-S
T ss_pred CCCEEEECCcchhHHH-HHHHhhCCCeeE
Confidence 3589999999999999 888889999765
No 228
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=32.61 E-value=14 Score=33.45 Aligned_cols=42 Identities=17% Similarity=0.108 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHh--cCC---CeEEEEEechhHHHHHHHHHhhcC
Q 024115 49 MGERLAQEVLEVIERK--RNL---RKISFVAHSVGGLVARYAIGKLYR 91 (272)
Q Consensus 49 ~~~~lA~~v~~ll~~~--~~~---~~i~lVGHSmGG~VaR~al~~l~~ 91 (272)
.|..+.|-|.+..+-. .++ .++.++|||-||.-+ .+.+.+.+
T Consensus 47 ~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~ 93 (290)
T PF03583_consen 47 EAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAP 93 (290)
T ss_pred HHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhH
Confidence 4455556666655411 132 589999999999976 55555444
No 229
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=32.25 E-value=38 Score=34.43 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=31.0
Q ss_pred hccCCccEEEEecCCCeeecceec-ccccc--CCCCCCcccccCCCCCccc
Q 024115 195 LCAFKRRVAYSNACYDHIVGWRTS-SIRRN--SELPKWEDSLDEKYPHIVH 242 (272)
Q Consensus 195 L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~--~~ip~a~l~i~~~~~H~~~ 242 (272)
|..=+++.|.++|--|.-|-+.-. .+-.+ +.=.-=+|.++|+-.|.+-
T Consensus 798 lpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR 848 (867)
T KOG2281|consen 798 LPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIR 848 (867)
T ss_pred CCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccC
Confidence 444567899999988988866533 22111 0113356899999999874
No 230
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=31.58 E-value=64 Score=29.37 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHH
Q 024115 47 DVMGERLAQEVLEVIERKRNLRKISFVAHSVGGL 80 (272)
Q Consensus 47 ~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~ 80 (272)
...|+..|++..+.+++.+.-.+..||-|||||.
T Consensus 64 ~~~g~~~a~~~~~~I~~~l~~~d~v~i~aglGGG 97 (304)
T cd02201 64 PEVGRKAAEESREEIKEALEGADMVFITAGMGGG 97 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeeccCCC
Confidence 3355777776666666444446678999999984
No 231
>PRK13018 cell division protein FtsZ; Provisional
Probab=31.24 E-value=69 Score=30.38 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHH
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGL 80 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~ 80 (272)
+....|+..|++..+.+++.+.-.+..||-|||||.
T Consensus 90 ~dp~~G~~aaee~~d~I~~~le~~D~vfI~aGLGGG 125 (378)
T PRK13018 90 GDPEVGRKAAEESRDEIKEVLKGADLVFVTAGMGGG 125 (378)
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCCEEEEEeeccCc
Confidence 334456777777766666555556789999999984
No 232
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=29.50 E-value=1.7e+02 Score=26.76 Aligned_cols=37 Identities=27% Similarity=0.461 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHH--hcCCCeEEEEEechhHH-HHHHHHHh
Q 024115 51 ERLAQEVLEVIER--KRNLRKISFVAHSVGGL-VARYAIGK 88 (272)
Q Consensus 51 ~~lA~~v~~ll~~--~~~~~~i~lVGHSmGG~-VaR~al~~ 88 (272)
+++...|.+++.- ..+..++++|||.+|.+ ++|| ++.
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~-la~ 213 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARY-LAE 213 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHH-Hhc
Confidence 4444444444431 24556799999999998 5544 444
No 233
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=28.80 E-value=58 Score=29.97 Aligned_cols=29 Identities=21% Similarity=0.291 Sum_probs=20.4
Q ss_pred HHHHHHhc-CCCeEEEEEechhHHHHHHHHH
Q 024115 58 LEVIERKR-NLRKISFVAHSVGGLVARYAIG 87 (272)
Q Consensus 58 ~~ll~~~~-~~~~i~lVGHSmGG~VaR~al~ 87 (272)
.+.++++. +..+..+.|||+|=|-| ++++
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysA-l~~a 103 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSA-LAAA 103 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHH-HHHc
Confidence 34444334 67889999999999987 5443
No 234
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=27.74 E-value=76 Score=30.04 Aligned_cols=27 Identities=19% Similarity=0.207 Sum_probs=21.0
Q ss_pred CCCeEEEEEechhHHHHHHHHHhhcCCC
Q 024115 66 NLRKISFVAHSVGGLVARYAIGKLYRPP 93 (272)
Q Consensus 66 ~~~~i~lVGHSmGG~VaR~al~~l~~~~ 93 (272)
..++|++-|+|.||.-+ .+++--||+.
T Consensus 309 ~~edIilygWSIGGF~~-~waAs~YPdV 335 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPV-AWAASNYPDV 335 (517)
T ss_pred CccceEEEEeecCCchH-HHHhhcCCCc
Confidence 45799999999999966 4455668874
No 235
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=26.21 E-value=96 Score=29.98 Aligned_cols=29 Identities=17% Similarity=0.129 Sum_probs=25.4
Q ss_pred CCeEEEEEechhHHHHHHHHHhhcCCCCcC
Q 024115 67 LRKISFVAHSVGGLVARYAIGKLYRPPKIE 96 (272)
Q Consensus 67 ~~~i~lVGHSmGG~VaR~al~~l~~~~~~~ 96 (272)
..+|+..|-|-||+.+ .++-..||..+.+
T Consensus 166 ~~pvIafGGSYGGMLa-AWfRlKYPHiv~G 194 (492)
T KOG2183|consen 166 ASPVIAFGGSYGGMLA-AWFRLKYPHIVLG 194 (492)
T ss_pred cCcEEEecCchhhHHH-HHHHhcChhhhhh
Confidence 4689999999999999 8888889998764
No 236
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=24.73 E-value=62 Score=29.74 Aligned_cols=23 Identities=17% Similarity=0.242 Sum_probs=20.3
Q ss_pred CeEEEEEechhHHHHHHHHHhhc
Q 024115 68 RKISFVAHSVGGLVARYAIGKLY 90 (272)
Q Consensus 68 ~~i~lVGHSmGG~VaR~al~~l~ 90 (272)
.+++|||+|-||.|.-+.+..++
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El~ 215 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYELH 215 (303)
T ss_pred CceEEEEecCcchHHHHHHHHHH
Confidence 47999999999999988887776
No 237
>PRK13463 phosphatase PhoE; Provisional
Probab=24.12 E-value=2.4e+02 Score=23.70 Aligned_cols=41 Identities=20% Similarity=0.383 Sum_probs=25.5
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 45 GVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 45 g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
++....+|+...+.++++ ....+.|.+|+|. .+.|..+..+
T Consensus 122 s~~~~~~R~~~~l~~i~~-~~~~~~vlvVsHg---~~ir~~~~~~ 162 (203)
T PRK13463 122 NFEAVHKRVIEGMQLLLE-KHKGESILIVSHA---AAAKLLVGHF 162 (203)
T ss_pred EHHHHHHHHHHHHHHHHH-hCCCCEEEEEeCh---HHHHHHHHHH
Confidence 344455777777777666 3444689999994 4444655543
No 238
>PRK03482 phosphoglycerate mutase; Provisional
Probab=24.00 E-value=2.2e+02 Score=23.97 Aligned_cols=41 Identities=12% Similarity=0.234 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhhc
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKLY 90 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l~ 90 (272)
+.....|+...+.++++ ....++|.+|+| ||.+ |..+..+.
T Consensus 122 ~~~~~~Rv~~~l~~~~~-~~~~~~vliVsH--g~~i-~~l~~~l~ 162 (215)
T PRK03482 122 MQELSDRMHAALESCLE-LPQGSRPLLVSH--GIAL-GCLVSTIL 162 (215)
T ss_pred HHHHHHHHHHHHHHHHH-hCCCCeEEEEeC--cHHH-HHHHHHHh
Confidence 44444666666666655 344467999999 3443 45555543
No 239
>PF12475 Amdo_NSP: Amdovirus non-structural protein ; InterPro: IPR020960 This domain family is found in viruses, and is approximately 50 amino acids in length. This family contains proteins of each of the three types of Amdovirus non-structural protein [].
Probab=23.82 E-value=28 Score=22.81 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=14.2
Q ss_pred cccccccchhhhhhhhh
Q 024115 2 IFSSRACKLLHVKLVQY 18 (272)
Q Consensus 2 ~~~~~~~~~~~~~~~~~ 18 (272)
||||..|++..+++...
T Consensus 29 ~~sn~~c~~q~i~d~~~ 45 (48)
T PF12475_consen 29 IFSNHHCDQQDIKDPEC 45 (48)
T ss_pred HHcccccchhhccChhh
Confidence 79999999998887543
No 240
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=23.70 E-value=2.1e+02 Score=28.09 Aligned_cols=72 Identities=11% Similarity=-0.013 Sum_probs=39.7
Q ss_pred cchhhhhhhhhhhhccC---CcceEEEEc-cCCC--CCCCCCCcHHHHHHHHHHHHHHHHHHhcC--CCeEEEEEechhH
Q 024115 8 CKLLHVKLVQYWCLSFH---NICWIHFVG-SERN--MSKLTLDGVDVMGERLAQEVLEVIERKRN--LRKISFVAHSVGG 79 (272)
Q Consensus 8 ~~~~~~~~~~~~~~~~~---~~~~~~~~~-s~~n--~~~~t~~g~~~~~~~lA~~v~~ll~~~~~--~~~i~lVGHSmGG 79 (272)
+|-..+.+++. ++.+. |-.-++|+. |.-+ ....+.-|+... -.-.+.|.+-|+ +.+ -+.|+|.|+|-|+
T Consensus 115 ydgs~La~~g~-vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~Dq-ilALkWV~~NIe-~FGGDp~NVTl~GeSAGa 191 (491)
T COG2272 115 YDGSALAARGD-VVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQ-ILALKWVRDNIE-AFGGDPQNVTLFGESAGA 191 (491)
T ss_pred cChHHHHhcCC-EEEEEeCcccccceeeehhhccccccccccccHHHH-HHHHHHHHHHHH-HhCCCccceEEeeccchH
Confidence 55566666663 22222 122245554 3222 332233455543 222266888888 543 5689999999999
Q ss_pred HHH
Q 024115 80 LVA 82 (272)
Q Consensus 80 ~Va 82 (272)
+.+
T Consensus 192 ~si 194 (491)
T COG2272 192 ASI 194 (491)
T ss_pred HHH
Confidence 966
No 241
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=23.66 E-value=1.2e+02 Score=27.45 Aligned_cols=51 Identities=12% Similarity=-0.089 Sum_probs=27.1
Q ss_pred HHHHhccCCccEEEEecCCCeeecceec-cccccCCCCCCcccccCCCCCcc
Q 024115 191 FMSALCAFKRRVAYSNACYDHIVGWRTS-SIRRNSELPKWEDSLDEKYPHIV 241 (272)
Q Consensus 191 ~~~~L~~f~~p~L~~~g~~D~iVP~~sa-~l~~~~~ip~a~l~i~~~~~H~~ 241 (272)
....++.+.+|.+...+.+|..|-...- .+...-.-+.-++..++|.+|=.
T Consensus 187 T~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 187 TINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL 238 (294)
T ss_dssp HHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T
T ss_pred HHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh
Confidence 4556788899998888889988854443 33332223445566778888854
No 242
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=22.69 E-value=1.2e+02 Score=29.47 Aligned_cols=30 Identities=17% Similarity=0.089 Sum_probs=25.8
Q ss_pred CCCeEEEEEechhHHHHHHHHHhhcCCCCcC
Q 024115 66 NLRKISFVAHSVGGLVARYAIGKLYRPPKIE 96 (272)
Q Consensus 66 ~~~~i~lVGHSmGG~VaR~al~~l~~~~~~~ 96 (272)
..++--+.|.|-||-=+ +..+.+||+.+.+
T Consensus 113 ~p~~sY~~GcS~GGRqg-l~~AQryP~dfDG 142 (474)
T PF07519_consen 113 APKYSYFSGCSTGGRQG-LMAAQRYPEDFDG 142 (474)
T ss_pred CCCceEEEEeCCCcchH-HHHHHhChhhcCe
Confidence 55789999999999988 7778889998775
No 243
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=22.39 E-value=1.3e+02 Score=28.72 Aligned_cols=31 Identities=13% Similarity=0.170 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcC--CCeEEEEEechhHHHHHHHH
Q 024115 55 QEVLEVIERKRN--LRKISFVAHSVGGLVARYAI 86 (272)
Q Consensus 55 ~~v~~ll~~~~~--~~~i~lVGHSmGG~VaR~al 86 (272)
+.|.+-|. ..| -++|++.|||-||..+-+.+
T Consensus 194 ~WV~~nI~-~FGGDp~~VTl~G~SAGa~sv~~~l 226 (535)
T PF00135_consen 194 KWVQDNIA-AFGGDPDNVTLFGQSAGAASVSLLL 226 (535)
T ss_dssp HHHHHHGG-GGTEEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHhhhh-hcccCCcceeeeeecccccccceee
Confidence 55777777 444 46899999999999552433
No 244
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=22.22 E-value=1.7e+02 Score=25.55 Aligned_cols=45 Identities=24% Similarity=0.443 Sum_probs=31.2
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHH-HHHHHHHhhcCC
Q 024115 43 LDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGL-VARYAIGKLYRP 92 (272)
Q Consensus 43 ~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~-VaR~al~~l~~~ 92 (272)
|..-...|+.||++|..+-. ..++++.|.+-||+ |+ +.++.....
T Consensus 4 F~DR~dAGr~La~~l~~~~~----~~~~iVlaLpRGGvpva-~evA~~lga 49 (220)
T COG1926 4 FRDRTDAGRKLAQELAALRD----LKDVIVLALPRGGVPVA-FEVAQALGA 49 (220)
T ss_pred cccHHHHHHHHHHHHHhhcc----CCCcEEEEecCCCchHH-HHHHHHhCC
Confidence 43444466888887665543 57899999999999 77 666654443
No 245
>PRK13462 acid phosphatase; Provisional
Probab=22.04 E-value=2.5e+02 Score=23.74 Aligned_cols=40 Identities=28% Similarity=0.397 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
.....+|+.+.+.++++ ...-++|.+|+|. .+.|..+...
T Consensus 119 ~~~~~~Rv~~~l~~i~~-~~~~~~vliVsHg---~vir~ll~~~ 158 (203)
T PRK13462 119 VAQVNERADRAVALALE-HMESRDVVFVSHG---HFSRAVITRW 158 (203)
T ss_pred HHHHHHHHHHHHHHHHH-hCCCCCEEEEeCC---HHHHHHHHHH
Confidence 34444666666776666 3344689999996 4555656553
No 246
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=21.88 E-value=3.3e+02 Score=21.89 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHhh
Q 024115 46 VDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGKL 89 (272)
Q Consensus 46 ~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~l 89 (272)
.....+|+.+.+.++.+ ....+.|.+|+|. |. .|..+..+
T Consensus 117 ~~~~~~R~~~~~~~l~~-~~~~~~vlvVsHg--~~-i~~l~~~~ 156 (177)
T TIGR03162 117 FADFYQRVSEFLEELLK-AHEGDNVLIVTHG--GV-IRALLAHL 156 (177)
T ss_pred HHHHHHHHHHHHHHHHH-hCCCCeEEEEECH--HH-HHHHHHHH
Confidence 44455777777777777 3445789999995 33 33444443
No 247
>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=21.64 E-value=1.8e+02 Score=27.13 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHh---cC--CCeEEEEEechhHH
Q 024115 48 VMGERLAQEVLEVIERK---RN--LRKISFVAHSVGGL 80 (272)
Q Consensus 48 ~~~~~lA~~v~~ll~~~---~~--~~~i~lVGHSmGG~ 80 (272)
..|+.++++..+.+++. .. .-+..+|-|||||.
T Consensus 73 ~~G~~~aee~~e~I~~~le~~~~~~~d~~~i~aglGGG 110 (349)
T cd02202 73 ELGAEVAEEDLEEVMRAIDDRGTSDADAILVIAGLGGG 110 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccEEEEecccCCC
Confidence 35577776644444322 22 25799999999976
No 248
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=21.39 E-value=24 Score=15.50 Aligned_cols=6 Identities=50% Similarity=0.977 Sum_probs=3.1
Q ss_pred EechhH
Q 024115 74 AHSVGG 79 (272)
Q Consensus 74 GHSmGG 79 (272)
|+||||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 455554
No 249
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=21.08 E-value=1e+02 Score=34.14 Aligned_cols=43 Identities=12% Similarity=0.272 Sum_probs=30.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEechhHHHHHHHHHh
Q 024115 41 LTLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHSVGGLVARYAIGK 88 (272)
Q Consensus 41 ~t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHSmGG~VaR~al~~ 88 (272)
-|.++|+.+|.-+.+++.. -....+..++|+|.|.+++ +.++.
T Consensus 2159 vP~dSies~A~~yirqirk----vQP~GPYrl~GYSyG~~l~-f~ma~ 2201 (2376)
T KOG1202|consen 2159 VPLDSIESLAAYYIRQIRK----VQPEGPYRLAGYSYGACLA-FEMAS 2201 (2376)
T ss_pred CCcchHHHHHHHHHHHHHh----cCCCCCeeeeccchhHHHH-HHHHH
Confidence 4677887765555554433 2345799999999999999 77765
No 250
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.98 E-value=1.2e+02 Score=26.85 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=21.4
Q ss_pred cCCCeEEEEEechhHHHHHHHHHhhcCCC
Q 024115 65 RNLRKISFVAHSVGGLVARYAIGKLYRPP 93 (272)
Q Consensus 65 ~~~~~i~lVGHSmGG~VaR~al~~l~~~~ 93 (272)
.....|-+|.||-||+.. .-+..++|..
T Consensus 187 a~~~sv~vvahsyGG~~t-~~l~~~f~~d 214 (297)
T KOG3967|consen 187 AKAESVFVVAHSYGGSLT-LDLVERFPDD 214 (297)
T ss_pred cCcceEEEEEeccCChhH-HHHHHhcCCc
Confidence 456799999999999977 5555656653
No 251
>COG3023 ampD N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=20.75 E-value=1.6e+02 Score=26.36 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=23.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 024115 42 TLDGVDVMGERLAQEVLEVIERKRNLRKISFVAHS 76 (272)
Q Consensus 42 t~~g~~~~~~~lA~~v~~ll~~~~~~~~i~lVGHS 76 (272)
+|..-+. ..|++-+..++++.+++.+-.++|||
T Consensus 122 py~~AQi--qal~~L~k~i~~ryP~I~~~~I~GHs 154 (257)
T COG3023 122 PYTEAQI--QALIALLKDIIARYPNITPERIVGHS 154 (257)
T ss_pred CCCHHHH--HHHHHHHHHHHHHccCCCHHHccccc
Confidence 4444443 66677777777755589999999998
Done!