Query 024121
Match_columns 272
No_of_seqs 263 out of 2087
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 18:32:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024121.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024121hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tri_A Pyrroline-5-carboxylate 100.0 4.6E-50 1.6E-54 340.9 31.2 262 9-272 2-269 (280)
2 3gt0_A Pyrroline-5-carboxylate 100.0 2.4E-44 8.1E-49 300.9 25.3 242 10-252 2-247 (247)
3 2izz_A Pyrroline-5-carboxylate 100.0 7.1E-42 2.4E-46 296.3 30.9 268 4-272 16-291 (322)
4 2ahr_A Putative pyrroline carb 100.0 2.3E-39 8E-44 272.4 30.6 254 9-271 2-259 (259)
5 2rcy_A Pyrroline carboxylate r 100.0 4.2E-39 1.4E-43 271.3 30.1 257 8-272 2-261 (262)
6 1yqg_A Pyrroline-5-carboxylate 100.0 7.4E-38 2.5E-42 263.8 29.5 253 11-272 1-259 (263)
7 2f1k_A Prephenate dehydrogenas 100.0 4.2E-32 1.5E-36 230.5 20.3 248 11-271 1-273 (279)
8 3b1f_A Putative prephenate deh 100.0 3.7E-30 1.3E-34 219.7 17.0 251 8-271 4-285 (290)
9 3c24_A Putative oxidoreductase 100.0 1.1E-29 3.9E-34 216.3 18.4 237 10-258 11-272 (286)
10 3ggo_A Prephenate dehydrogenas 100.0 1.5E-29 5.2E-34 217.7 18.4 250 10-270 33-308 (314)
11 3obb_A Probable 3-hydroxyisobu 100.0 1.4E-28 4.8E-33 210.1 21.7 253 9-270 2-279 (300)
12 2g5c_A Prephenate dehydrogenas 100.0 1.8E-28 6.1E-33 208.3 14.9 250 10-270 1-276 (281)
13 2pv7_A T-protein [includes: ch 100.0 9.6E-28 3.3E-32 205.4 19.3 231 10-270 21-272 (298)
14 3ktd_A Prephenate dehydrogenas 100.0 2.2E-28 7.4E-33 211.9 15.2 227 9-251 7-262 (341)
15 4gbj_A 6-phosphogluconate dehy 100.0 5.8E-27 2E-31 200.1 21.6 247 11-270 6-274 (297)
16 3l6d_A Putative oxidoreductase 99.9 1.5E-25 5.3E-30 192.4 26.5 256 3-271 2-279 (306)
17 3doj_A AT3G25530, dehydrogenas 99.9 3E-25 1E-29 191.0 22.5 251 6-270 17-290 (310)
18 3g0o_A 3-hydroxyisobutyrate de 99.9 3.6E-25 1.2E-29 189.9 21.9 248 9-271 6-279 (303)
19 3pdu_A 3-hydroxyisobutyrate de 99.9 1.7E-25 5.8E-30 190.5 19.3 248 10-271 1-271 (287)
20 1yb4_A Tartronic semialdehyde 99.9 4E-26 1.4E-30 195.0 14.8 249 9-271 2-272 (295)
21 2uyy_A N-PAC protein; long-cha 99.9 4.2E-25 1.4E-29 190.6 21.2 252 7-271 27-300 (316)
22 1vpd_A Tartronate semialdehyde 99.9 3.8E-25 1.3E-29 189.4 19.1 250 10-271 5-275 (299)
23 3pef_A 6-phosphogluconate dehy 99.9 9.6E-25 3.3E-29 185.9 20.7 247 11-271 2-271 (287)
24 3fr7_A Putative ketol-acid red 99.9 6.1E-25 2.1E-29 194.2 18.7 218 8-237 51-308 (525)
25 2cvz_A Dehydrogenase, 3-hydrox 99.9 1.9E-25 6.4E-30 190.3 14.4 246 11-271 2-266 (289)
26 2h78_A Hibadh, 3-hydroxyisobut 99.9 2.2E-24 7.5E-29 184.9 20.8 252 9-271 2-280 (302)
27 3cky_A 2-hydroxymethyl glutara 99.9 3.1E-25 1E-29 190.1 14.7 250 9-271 3-275 (301)
28 4dll_A 2-hydroxy-3-oxopropiona 99.9 3.2E-24 1.1E-28 185.3 20.7 247 9-270 30-298 (320)
29 1np3_A Ketol-acid reductoisome 99.9 1.7E-24 5.9E-29 188.2 19.0 217 9-238 15-264 (338)
30 2i76_A Hypothetical protein; N 99.9 9.3E-25 3.2E-29 184.9 14.7 220 10-250 2-235 (276)
31 3qsg_A NAD-binding phosphogluc 99.9 8.6E-24 3E-28 182.0 20.7 245 9-271 23-288 (312)
32 3qha_A Putative oxidoreductase 99.9 8.3E-24 2.8E-28 180.8 17.7 244 10-271 15-289 (296)
33 3d1l_A Putative NADP oxidoredu 99.9 1.1E-23 3.9E-28 177.3 17.9 204 4-219 4-220 (266)
34 2dpo_A L-gulonate 3-dehydrogen 99.9 1.7E-22 5.7E-27 173.8 24.1 198 8-215 4-230 (319)
35 1i36_A Conserved hypothetical 99.9 3.6E-23 1.2E-27 174.0 18.7 237 11-271 1-252 (264)
36 4e12_A Diketoreductase; oxidor 99.9 8.7E-22 3E-26 167.2 23.3 197 7-213 1-226 (283)
37 4e21_A 6-phosphogluconate dehy 99.9 3.5E-22 1.2E-26 174.4 20.7 201 4-212 16-272 (358)
38 2zyd_A 6-phosphogluconate dehy 99.9 5.6E-22 1.9E-26 179.5 22.4 195 8-211 13-233 (480)
39 2gf2_A Hibadh, 3-hydroxyisobut 99.9 4.7E-23 1.6E-27 176.1 14.3 248 11-270 1-276 (296)
40 2p4q_A 6-phosphogluconate dehy 99.9 1.2E-21 4.1E-26 177.9 21.3 192 10-210 10-227 (497)
41 1zej_A HBD-9, 3-hydroxyacyl-CO 99.9 4.3E-21 1.5E-25 162.7 21.6 188 10-215 12-210 (293)
42 4huj_A Uncharacterized protein 99.9 6.3E-22 2.2E-26 162.0 15.1 154 8-170 21-199 (220)
43 4ezb_A Uncharacterized conserv 99.9 5.4E-21 1.8E-25 164.8 20.3 240 10-270 24-293 (317)
44 1f0y_A HCDH, L-3-hydroxyacyl-C 99.9 2.4E-20 8.2E-25 159.8 23.6 190 10-211 15-238 (302)
45 2ew2_A 2-dehydropantoate 2-red 99.9 6.3E-21 2.2E-25 164.0 19.0 157 9-170 2-183 (316)
46 1z82_A Glycerol-3-phosphate de 99.9 1E-20 3.5E-25 164.4 20.3 247 10-270 14-315 (335)
47 4gwg_A 6-phosphogluconate dehy 99.9 1.2E-20 4.2E-25 170.0 19.7 194 9-210 3-222 (484)
48 2iz1_A 6-phosphogluconate dehy 99.9 2.2E-20 7.6E-25 169.2 21.4 195 8-211 3-224 (474)
49 3dtt_A NADP oxidoreductase; st 99.9 9.8E-21 3.4E-25 157.4 17.6 169 7-183 16-227 (245)
50 3k96_A Glycerol-3-phosphate de 99.9 1.4E-19 4.7E-24 158.0 24.0 250 9-265 28-335 (356)
51 2pgd_A 6-phosphogluconate dehy 99.9 1E-19 3.4E-24 165.2 22.1 191 11-210 3-220 (482)
52 3mog_A Probable 3-hydroxybutyr 99.8 9.7E-20 3.3E-24 164.7 21.4 190 9-211 4-222 (483)
53 3k6j_A Protein F01G10.3, confi 99.8 5.7E-19 2E-23 157.7 25.1 191 8-210 52-267 (460)
54 2qyt_A 2-dehydropantoate 2-red 99.8 2.7E-20 9.2E-25 160.3 15.5 153 11-170 9-193 (317)
55 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.8 2.1E-19 7.2E-24 162.8 19.9 191 11-210 2-221 (478)
56 1jay_A Coenzyme F420H2:NADP+ o 99.8 8.2E-20 2.8E-24 148.5 15.1 166 11-185 1-197 (212)
57 1evy_A Glycerol-3-phosphate de 99.8 1.5E-18 5.3E-23 152.4 23.9 154 7-166 12-195 (366)
58 1x0v_A GPD-C, GPDH-C, glycerol 99.8 2.9E-18 9.8E-23 150.0 22.1 152 9-166 7-194 (354)
59 1yj8_A Glycerol-3-phosphate de 99.8 2.3E-18 8E-23 151.7 21.4 151 10-166 21-211 (375)
60 1ks9_A KPA reductase;, 2-dehyd 99.8 1.6E-19 5.4E-24 153.5 12.8 151 11-168 1-167 (291)
61 1wdk_A Fatty oxidation complex 99.8 3.5E-18 1.2E-22 161.5 22.7 189 8-209 312-528 (715)
62 3hn2_A 2-dehydropantoate 2-red 99.8 2.2E-18 7.4E-23 148.2 19.5 154 10-171 2-179 (312)
63 2yjz_A Metalloreductase steap4 99.7 2.1E-21 7.3E-26 156.4 0.0 152 8-170 17-183 (201)
64 1txg_A Glycerol-3-phosphate de 99.8 1E-17 3.6E-22 145.2 22.9 149 11-166 1-177 (335)
65 3dfu_A Uncharacterized protein 99.8 2E-18 6.8E-23 140.7 13.6 137 9-179 5-143 (232)
66 2wtb_A MFP2, fatty acid multif 99.8 2.8E-17 9.7E-22 155.4 23.5 189 8-209 310-526 (725)
67 1zcj_A Peroxisomal bifunctiona 99.8 3.3E-17 1.1E-21 147.8 22.7 190 7-210 34-250 (463)
68 2vns_A Metalloreductase steap3 99.8 8.3E-18 2.8E-22 137.0 14.9 152 9-170 27-195 (215)
69 3pid_A UDP-glucose 6-dehydroge 99.8 4.8E-17 1.6E-21 144.4 20.5 192 4-210 30-269 (432)
70 3gg2_A Sugar dehydrogenase, UD 99.8 7.8E-17 2.7E-21 144.7 20.9 189 11-210 3-248 (450)
71 2raf_A Putative dinucleotide-b 99.8 1.3E-17 4.3E-22 135.3 13.6 136 9-170 18-177 (209)
72 4a7p_A UDP-glucose dehydrogena 99.7 5.2E-17 1.8E-21 145.3 17.7 191 10-211 8-253 (446)
73 3i83_A 2-dehydropantoate 2-red 99.7 2.8E-16 9.7E-21 135.5 20.1 154 10-170 2-180 (320)
74 3ghy_A Ketopantoate reductase 99.7 5.3E-17 1.8E-21 140.9 14.9 155 9-170 2-198 (335)
75 3hwr_A 2-dehydropantoate 2-red 99.7 8.7E-16 3E-20 132.3 21.7 149 9-170 18-189 (318)
76 2q3e_A UDP-glucose 6-dehydroge 99.7 2E-16 6.8E-21 143.1 17.5 198 7-211 2-258 (467)
77 1mv8_A GMD, GDP-mannose 6-dehy 99.7 3.3E-16 1.1E-20 140.6 17.7 189 11-210 1-246 (436)
78 2y0c_A BCEC, UDP-glucose dehyd 99.7 4.8E-16 1.7E-20 140.6 16.4 190 10-210 8-258 (478)
79 3ado_A Lambda-crystallin; L-gu 99.7 6.6E-15 2.3E-19 125.8 21.3 153 9-167 5-186 (319)
80 2o3j_A UDP-glucose 6-dehydroge 99.7 9.1E-16 3.1E-20 139.1 16.3 197 8-210 7-263 (481)
81 1dlj_A UDP-glucose dehydrogena 99.7 3.5E-15 1.2E-19 132.4 19.3 192 11-210 1-240 (402)
82 3ego_A Probable 2-dehydropanto 99.7 3.2E-15 1.1E-19 128.2 16.9 109 10-126 2-121 (307)
83 3g79_A NDP-N-acetyl-D-galactos 99.7 2.1E-15 7.3E-20 135.7 15.9 194 8-210 16-271 (478)
84 3ojo_A CAP5O; rossmann fold, c 99.6 2.4E-14 8.4E-19 127.2 19.9 184 11-210 12-251 (431)
85 3g17_A Similar to 2-dehydropan 99.6 1E-15 3.5E-20 130.4 6.7 150 10-170 2-161 (294)
86 1bg6_A N-(1-D-carboxylethyl)-L 99.5 5.1E-14 1.8E-18 123.0 12.5 94 8-106 2-110 (359)
87 4fgw_A Glycerol-3-phosphate de 99.5 5.9E-13 2E-17 116.5 15.6 158 11-170 35-234 (391)
88 3zwc_A Peroxisomal bifunctiona 99.5 1.2E-11 4.2E-16 116.7 24.2 156 7-169 313-494 (742)
89 3ulk_A Ketol-acid reductoisome 99.4 1E-10 3.6E-15 102.0 23.4 205 7-220 34-265 (491)
90 3c7a_A Octopine dehydrogenase; 99.4 9.1E-13 3.1E-17 117.1 10.0 95 10-109 2-120 (404)
91 1ygy_A PGDH, D-3-phosphoglycer 99.4 1.7E-12 5.9E-17 118.8 10.3 164 6-176 138-325 (529)
92 3vtf_A UDP-glucose 6-dehydroge 99.3 1.2E-10 4.1E-15 103.5 20.1 198 4-210 15-264 (444)
93 2w2k_A D-mandelate dehydrogena 99.3 2.9E-12 9.9E-17 111.4 9.3 108 6-118 159-271 (348)
94 2gcg_A Glyoxylate reductase/hy 99.3 2E-12 6.9E-17 111.7 7.9 107 6-118 151-261 (330)
95 1gdh_A D-glycerate dehydrogena 99.3 6.6E-12 2.2E-16 107.9 8.4 106 7-118 143-253 (320)
96 2hk9_A Shikimate dehydrogenase 99.3 3.4E-12 1.2E-16 107.6 6.2 121 8-136 127-249 (275)
97 2dbq_A Glyoxylate reductase; D 99.3 6E-12 2.1E-16 108.8 7.4 105 7-118 147-255 (334)
98 3ba1_A HPPR, hydroxyphenylpyru 99.2 7.6E-12 2.6E-16 107.9 6.5 103 6-118 160-266 (333)
99 2j6i_A Formate dehydrogenase; 99.2 2E-11 6.9E-16 106.5 8.8 108 6-118 160-272 (364)
100 2ekl_A D-3-phosphoglycerate de 99.2 2.1E-11 7.2E-16 104.4 8.7 106 6-118 138-247 (313)
101 2nac_A NAD-dependent formate d 99.2 2.6E-11 9.1E-16 106.4 9.4 107 7-118 188-298 (393)
102 4dgs_A Dehydrogenase; structur 99.2 2.8E-11 9.7E-16 104.3 9.3 103 6-118 167-273 (340)
103 3jtm_A Formate dehydrogenase, 99.2 1.6E-11 5.5E-16 106.4 7.4 108 6-118 160-271 (351)
104 1mx3_A CTBP1, C-terminal bindi 99.2 2.3E-11 7.8E-16 105.4 8.0 106 7-118 165-274 (347)
105 2d0i_A Dehydrogenase; structur 99.2 1.6E-11 5.5E-16 106.0 6.8 105 6-118 142-250 (333)
106 1wwk_A Phosphoglycerate dehydr 99.2 2.9E-11 1E-15 103.2 7.6 105 7-118 139-247 (307)
107 3gg9_A D-3-phosphoglycerate de 99.2 3.2E-11 1.1E-15 104.6 7.9 107 6-118 156-266 (352)
108 2i99_A MU-crystallin homolog; 99.2 5.3E-11 1.8E-15 102.0 7.9 89 9-105 134-226 (312)
109 4e5n_A Thermostable phosphite 99.2 2.7E-11 9.1E-16 104.4 6.1 106 7-118 142-251 (330)
110 3gvx_A Glycerate dehydrogenase 99.2 1.8E-11 6.1E-16 103.4 4.8 101 8-118 120-224 (290)
111 2g76_A 3-PGDH, D-3-phosphoglyc 99.2 6.6E-11 2.3E-15 102.0 8.4 106 6-118 161-270 (335)
112 4g2n_A D-isomer specific 2-hyd 99.1 5.1E-11 1.7E-15 103.0 7.1 106 6-118 169-278 (345)
113 1hyh_A L-hicdh, L-2-hydroxyiso 99.1 2.2E-10 7.4E-15 98.1 10.9 95 11-110 2-127 (309)
114 2d5c_A AROE, shikimate 5-dehyd 99.1 7.6E-11 2.6E-15 98.6 6.4 115 9-135 116-235 (263)
115 2pi1_A D-lactate dehydrogenase 99.1 1.5E-10 5.1E-15 99.8 8.2 104 7-118 138-245 (334)
116 1lss_A TRK system potassium up 99.1 8.5E-10 2.9E-14 82.6 11.4 96 9-110 3-107 (140)
117 1qp8_A Formate dehydrogenase; 99.1 5.3E-11 1.8E-15 101.4 4.9 101 7-118 121-225 (303)
118 3d4o_A Dipicolinate synthase s 99.1 5.9E-10 2E-14 94.7 11.0 115 7-133 152-272 (293)
119 4hy3_A Phosphoglycerate oxidor 99.1 3E-10 1E-14 98.8 8.9 105 7-118 173-281 (365)
120 2cuk_A Glycerate dehydrogenase 99.1 7.1E-11 2.4E-15 101.0 4.4 100 7-118 141-244 (311)
121 3evt_A Phosphoglycerate dehydr 99.1 7.2E-11 2.5E-15 101.3 4.0 106 6-118 133-242 (324)
122 2rir_A Dipicolinate synthase, 99.0 9.9E-10 3.4E-14 93.6 10.6 94 6-107 153-248 (300)
123 3oj0_A Glutr, glutamyl-tRNA re 99.0 1.4E-10 4.8E-15 87.9 4.8 88 10-106 21-111 (144)
124 3uuw_A Putative oxidoreductase 99.0 1.1E-09 3.6E-14 93.7 10.5 101 6-114 2-107 (308)
125 3u62_A Shikimate dehydrogenase 99.0 6.3E-11 2.2E-15 98.3 2.7 121 9-139 108-232 (253)
126 3pp8_A Glyoxylate/hydroxypyruv 99.0 4.5E-11 1.5E-15 102.2 1.9 102 7-118 136-244 (315)
127 1j4a_A D-LDH, D-lactate dehydr 99.0 2.8E-10 9.5E-15 98.3 6.3 104 7-118 143-250 (333)
128 1a5z_A L-lactate dehydrogenase 99.0 3E-09 1E-13 91.3 12.7 96 11-110 1-121 (319)
129 3hg7_A D-isomer specific 2-hyd 99.0 1.1E-10 3.7E-15 100.1 3.4 105 7-118 137-245 (324)
130 3euw_A MYO-inositol dehydrogen 99.0 2.3E-09 8E-14 93.0 11.8 79 9-92 3-86 (344)
131 1y81_A Conserved hypothetical 99.0 4.9E-10 1.7E-14 84.3 6.5 95 9-116 13-111 (138)
132 1sc6_A PGDH, D-3-phosphoglycer 99.0 5.6E-10 1.9E-14 98.6 7.9 104 6-118 141-248 (404)
133 1lld_A L-lactate dehydrogenase 99.0 2.8E-09 9.5E-14 91.5 11.8 113 9-125 6-148 (319)
134 2g1u_A Hypothetical protein TM 99.0 2.2E-09 7.4E-14 82.3 9.9 100 4-108 13-121 (155)
135 2yq5_A D-isomer specific 2-hyd 99.0 3.8E-10 1.3E-14 97.4 6.0 102 8-118 146-251 (343)
136 3db2_A Putative NADPH-dependen 99.0 3.2E-09 1.1E-13 92.5 11.0 99 8-114 3-107 (354)
137 1dxy_A D-2-hydroxyisocaproate 99.0 1E-09 3.6E-14 94.6 7.5 109 6-123 141-253 (333)
138 3k5p_A D-3-phosphoglycerate de 99.0 9.6E-10 3.3E-14 96.9 7.4 104 6-118 152-259 (416)
139 3c85_A Putative glutathione-re 99.0 4.1E-09 1.4E-13 83.0 10.3 93 8-106 37-140 (183)
140 3q2i_A Dehydrogenase; rossmann 98.9 5.4E-09 1.8E-13 91.0 11.5 86 9-102 12-103 (354)
141 2duw_A Putative COA-binding pr 98.9 1.5E-09 5.2E-14 82.3 6.9 95 10-117 13-113 (145)
142 3rc1_A Sugar 3-ketoreductase; 98.9 4.9E-09 1.7E-13 91.2 11.0 103 5-115 22-131 (350)
143 3ic5_A Putative saccharopine d 98.9 4.5E-09 1.5E-13 76.2 9.0 91 9-107 4-102 (118)
144 4hkt_A Inositol 2-dehydrogenas 98.9 6.3E-09 2.2E-13 89.7 10.9 96 10-114 3-104 (331)
145 1x7d_A Ornithine cyclodeaminas 98.9 1.4E-09 4.9E-14 94.3 6.7 91 9-104 128-225 (350)
146 3llv_A Exopolyphosphatase-rela 98.9 1.4E-08 4.7E-13 76.4 11.3 101 9-114 5-113 (141)
147 2ewd_A Lactate dehydrogenase,; 98.9 4.6E-09 1.6E-13 90.1 9.7 96 9-110 3-126 (317)
148 2o4c_A Erythronate-4-phosphate 98.9 8.9E-10 3E-14 96.2 5.0 102 7-118 113-222 (380)
149 2dc1_A L-aspartate dehydrogena 98.9 2.1E-09 7.1E-14 88.4 6.4 80 11-106 1-82 (236)
150 3oet_A Erythronate-4-phosphate 98.9 9.5E-10 3.2E-14 95.8 4.4 103 6-118 115-225 (381)
151 3e9m_A Oxidoreductase, GFO/IDH 98.9 5.8E-09 2E-13 90.0 9.3 99 8-114 3-108 (330)
152 1xdw_A NAD+-dependent (R)-2-hy 98.9 1.2E-09 4.1E-14 94.2 4.8 103 7-118 143-249 (331)
153 3ezy_A Dehydrogenase; structur 98.9 1.2E-08 4.2E-13 88.4 10.8 97 10-114 2-105 (344)
154 3fwz_A Inner membrane protein 98.9 5.5E-08 1.9E-12 73.1 12.9 91 10-106 7-106 (140)
155 3c1a_A Putative oxidoreductase 98.9 3.9E-09 1.3E-13 90.4 7.4 101 5-114 5-110 (315)
156 2v6b_A L-LDH, L-lactate dehydr 98.8 3.1E-08 1.1E-12 84.4 12.4 111 11-125 1-138 (304)
157 3mz0_A Inositol 2-dehydrogenas 98.8 2.1E-08 7.1E-13 87.0 11.3 85 10-102 2-94 (344)
158 3cea_A MYO-inositol 2-dehydrog 98.8 2.1E-08 7.2E-13 86.9 11.1 89 6-102 4-99 (346)
159 2ho3_A Oxidoreductase, GFO/IDH 98.8 2.8E-08 9.5E-13 85.5 11.6 85 10-102 1-90 (325)
160 1xea_A Oxidoreductase, GFO/IDH 98.8 2.7E-08 9.3E-13 85.4 11.0 77 10-91 2-83 (323)
161 3ec7_A Putative dehydrogenase; 98.8 2.9E-08 9.9E-13 86.5 11.2 100 8-115 21-129 (357)
162 3e18_A Oxidoreductase; dehydro 98.8 3.3E-08 1.1E-12 86.3 11.3 87 8-102 3-93 (359)
163 1tlt_A Putative oxidoreductase 98.8 2.3E-08 7.8E-13 85.8 9.6 98 8-113 3-105 (319)
164 1v8b_A Adenosylhomocysteinase; 98.8 3.1E-08 1E-12 88.8 10.3 100 7-115 254-357 (479)
165 1guz_A Malate dehydrogenase; o 98.8 5E-08 1.7E-12 83.3 10.8 92 11-109 1-122 (310)
166 2glx_A 1,5-anhydro-D-fructose 98.7 5.4E-08 1.8E-12 83.8 11.0 84 11-102 1-90 (332)
167 3qy9_A DHPR, dihydrodipicolina 98.7 2.9E-08 1E-12 81.5 8.3 90 9-114 2-92 (243)
168 3l4b_C TRKA K+ channel protien 98.7 1.1E-07 3.7E-12 76.9 11.6 89 11-104 1-98 (218)
169 2hmt_A YUAA protein; RCK, KTN, 98.7 2.8E-08 9.6E-13 74.5 7.4 90 9-103 5-103 (144)
170 3ohs_X Trans-1,2-dihydrobenzen 98.7 8.7E-08 3E-12 82.7 11.5 101 10-115 2-108 (334)
171 3d64_A Adenosylhomocysteinase; 98.7 4E-08 1.4E-12 88.4 9.6 97 7-113 274-375 (494)
172 1omo_A Alanine dehydrogenase; 98.7 4.2E-08 1.4E-12 84.3 9.1 87 9-104 124-216 (322)
173 2hjr_A Malate dehydrogenase; m 98.7 7.5E-08 2.6E-12 82.9 10.6 93 10-108 14-134 (328)
174 1obb_A Maltase, alpha-glucosid 98.7 1E-07 3.4E-12 85.7 11.7 110 9-125 2-173 (480)
175 3h9u_A Adenosylhomocysteinase; 98.7 5E-08 1.7E-12 86.0 9.5 100 7-115 208-311 (436)
176 1ydw_A AX110P-like protein; st 98.7 8E-08 2.7E-12 83.8 10.8 88 7-102 3-99 (362)
177 1pzg_A LDH, lactate dehydrogen 98.7 1.3E-07 4.5E-12 81.4 11.7 95 10-109 9-136 (331)
178 3evn_A Oxidoreductase, GFO/IDH 98.7 2.8E-08 9.7E-13 85.6 7.5 101 8-115 3-109 (329)
179 1u8x_X Maltose-6'-phosphate gl 98.7 7.4E-08 2.5E-12 86.5 9.8 113 10-125 28-193 (472)
180 1h6d_A Precursor form of gluco 98.7 1.1E-07 3.7E-12 85.0 10.2 87 8-102 81-178 (433)
181 3p2y_A Alanine dehydrogenase/p 98.6 3.4E-08 1.2E-12 85.9 6.6 92 9-105 183-302 (381)
182 3hdj_A Probable ornithine cycl 98.6 4.6E-08 1.6E-12 83.5 7.2 87 9-105 120-213 (313)
183 1t2d_A LDH-P, L-lactate dehydr 98.6 1.7E-07 5.7E-12 80.5 10.6 94 9-108 3-129 (322)
184 3m2t_A Probable dehydrogenase; 98.6 7.5E-08 2.6E-12 83.9 8.4 87 8-102 3-96 (359)
185 2z2v_A Hypothetical protein PH 98.6 5.6E-08 1.9E-12 84.9 7.3 89 9-106 15-109 (365)
186 3fef_A Putative glucosidase LP 98.6 1.4E-07 4.7E-12 84.1 9.8 114 8-124 3-167 (450)
187 3ce6_A Adenosylhomocysteinase; 98.6 1.5E-07 5.3E-12 84.8 10.0 90 7-106 271-362 (494)
188 2p2s_A Putative oxidoreductase 98.6 1.6E-07 5.6E-12 81.0 9.8 87 8-102 2-94 (336)
189 1f06_A MESO-diaminopimelate D- 98.6 4.3E-08 1.5E-12 84.2 5.9 96 8-113 1-98 (320)
190 3u3x_A Oxidoreductase; structu 98.6 2.5E-07 8.7E-12 80.7 10.8 102 5-115 21-130 (361)
191 2zqz_A L-LDH, L-lactate dehydr 98.6 5.4E-07 1.8E-11 77.4 12.4 105 1-110 1-130 (326)
192 1ldn_A L-lactate dehydrogenase 98.6 4.5E-07 1.5E-11 77.6 11.5 97 9-109 5-127 (316)
193 4dio_A NAD(P) transhydrogenase 98.6 7.7E-08 2.6E-12 84.4 6.7 91 10-105 190-312 (405)
194 3bio_A Oxidoreductase, GFO/IDH 98.6 1.4E-07 4.9E-12 80.3 8.0 84 9-104 8-95 (304)
195 1id1_A Putative potassium chan 98.6 6.2E-07 2.1E-11 68.3 10.9 94 9-107 2-107 (153)
196 3dty_A Oxidoreductase, GFO/IDH 98.6 2.3E-07 7.8E-12 82.0 9.4 89 6-102 8-113 (398)
197 4gqa_A NAD binding oxidoreduct 98.5 4.1E-07 1.4E-11 80.7 10.5 95 4-102 20-124 (412)
198 3moi_A Probable dehydrogenase; 98.5 3.3E-07 1.1E-11 80.7 9.7 85 10-102 2-92 (387)
199 1iuk_A Hypothetical protein TT 98.5 9.8E-08 3.4E-12 71.8 5.3 102 10-123 13-121 (140)
200 4had_A Probable oxidoreductase 98.5 4.6E-07 1.6E-11 78.6 10.3 86 9-102 22-114 (350)
201 1y6j_A L-lactate dehydrogenase 98.5 8.8E-07 3E-11 75.8 11.9 112 10-125 7-147 (318)
202 3pqe_A L-LDH, L-lactate dehydr 98.5 9.3E-07 3.2E-11 75.8 11.8 97 9-109 4-126 (326)
203 3d0o_A L-LDH 1, L-lactate dehy 98.5 1E-06 3.6E-11 75.3 12.1 97 9-109 5-127 (317)
204 1zh8_A Oxidoreductase; TM0312, 98.5 7.6E-07 2.6E-11 77.0 11.3 88 7-102 15-110 (340)
205 3v5n_A Oxidoreductase; structu 98.5 4.6E-07 1.6E-11 80.6 10.0 87 8-102 35-138 (417)
206 3kb6_A D-lactate dehydrogenase 98.5 3E-07 1E-11 79.1 8.5 108 8-123 139-250 (334)
207 2nvw_A Galactose/lactose metab 98.5 4.5E-07 1.5E-11 82.0 9.7 79 8-91 37-128 (479)
208 3n58_A Adenosylhomocysteinase; 98.5 1.1E-06 3.7E-11 77.5 11.8 91 7-107 244-336 (464)
209 2egg_A AROE, shikimate 5-dehyd 98.5 1.8E-07 6.1E-12 79.4 6.6 94 8-106 139-241 (297)
210 2ixa_A Alpha-N-acetylgalactosa 98.5 1.1E-06 3.7E-11 78.8 11.9 88 7-102 17-119 (444)
211 1oju_A MDH, malate dehydrogena 98.5 1E-06 3.6E-11 74.4 11.0 94 11-109 1-122 (294)
212 1ez4_A Lactate dehydrogenase; 98.5 1.6E-06 5.4E-11 74.2 12.2 97 9-109 4-125 (318)
213 3gvp_A Adenosylhomocysteinase 98.5 3.6E-07 1.2E-11 80.4 8.1 91 7-107 217-309 (435)
214 3kux_A Putative oxidoreductase 98.5 1.1E-06 3.6E-11 76.4 11.0 86 7-102 4-95 (352)
215 4gmf_A Yersiniabactin biosynth 98.5 5E-07 1.7E-11 78.9 8.7 103 4-116 1-111 (372)
216 1ur5_A Malate dehydrogenase; o 98.4 1.1E-06 3.9E-11 74.8 10.4 94 10-109 2-123 (309)
217 2i6t_A Ubiquitin-conjugating e 98.4 1.6E-06 5.4E-11 73.6 11.2 96 9-109 13-129 (303)
218 3gvi_A Malate dehydrogenase; N 98.4 1.7E-06 5.8E-11 74.1 11.3 99 5-109 2-128 (324)
219 2d59_A Hypothetical protein PH 98.4 7.7E-07 2.6E-11 67.2 8.2 95 10-117 22-120 (144)
220 3e82_A Putative oxidoreductase 98.4 1.4E-06 4.7E-11 76.1 11.0 96 8-114 5-108 (364)
221 3btv_A Galactose/lactose metab 98.4 4.6E-07 1.6E-11 81.1 8.0 77 9-90 19-108 (438)
222 3f4l_A Putative oxidoreductase 98.4 3.7E-07 1.3E-11 79.1 6.9 96 10-114 2-106 (345)
223 1s6y_A 6-phospho-beta-glucosid 98.4 8.5E-07 2.9E-11 79.3 9.3 113 10-125 7-174 (450)
224 2xxj_A L-LDH, L-lactate dehydr 98.4 2.2E-06 7.6E-11 73.0 11.4 95 11-109 1-120 (310)
225 3nep_X Malate dehydrogenase; h 98.4 2.2E-06 7.5E-11 73.1 11.3 95 11-109 1-122 (314)
226 3ldh_A Lactate dehydrogenase; 98.4 3.5E-06 1.2E-10 72.1 12.0 96 9-109 20-142 (330)
227 3p7m_A Malate dehydrogenase; p 98.4 1.7E-06 5.7E-11 74.1 10.0 97 8-109 3-126 (321)
228 3don_A Shikimate dehydrogenase 98.4 1.4E-07 4.9E-12 79.0 3.1 95 8-106 115-211 (277)
229 3gdo_A Uncharacterized oxidore 98.4 2.9E-06 1E-10 73.8 11.4 84 9-102 4-93 (358)
230 3vku_A L-LDH, L-lactate dehydr 98.4 4.7E-06 1.6E-10 71.3 12.3 97 9-109 8-129 (326)
231 3abi_A Putative uncharacterize 98.3 7.6E-07 2.6E-11 77.7 7.3 88 9-105 15-108 (365)
232 4h3v_A Oxidoreductase domain p 98.3 2.2E-06 7.5E-11 75.1 10.2 92 7-102 3-103 (390)
233 2vhw_A Alanine dehydrogenase; 98.3 1.1E-06 3.7E-11 77.1 7.9 93 8-105 166-268 (377)
234 4fb5_A Probable oxidoreductase 98.3 3.4E-06 1.2E-10 73.9 11.2 91 8-102 23-122 (393)
235 4f3y_A DHPR, dihydrodipicolina 98.3 6.1E-07 2.1E-11 74.9 5.8 99 8-114 5-113 (272)
236 2nu8_A Succinyl-COA ligase [AD 98.3 1.6E-06 5.4E-11 73.2 8.2 94 9-112 6-103 (288)
237 1x13_A NAD(P) transhydrogenase 98.3 8.6E-07 2.9E-11 78.3 6.6 87 10-105 172-292 (401)
238 3o8q_A Shikimate 5-dehydrogena 98.3 1E-06 3.4E-11 74.0 6.7 92 8-105 124-221 (281)
239 1p77_A Shikimate 5-dehydrogena 98.3 7.1E-07 2.4E-11 74.7 5.6 91 8-105 117-214 (272)
240 3phh_A Shikimate dehydrogenase 98.3 1.5E-06 5.3E-11 72.2 7.4 90 10-106 118-210 (269)
241 3l9w_A Glutathione-regulated p 98.3 6.6E-06 2.3E-10 72.9 11.8 90 9-103 3-100 (413)
242 3fhl_A Putative oxidoreductase 98.3 2.4E-06 8.3E-11 74.4 8.9 85 8-102 3-93 (362)
243 3tl2_A Malate dehydrogenase; c 98.3 6.4E-06 2.2E-10 70.2 11.0 96 9-109 7-131 (315)
244 2d4a_B Malate dehydrogenase; a 98.3 5.6E-06 1.9E-10 70.5 10.5 92 12-109 1-120 (308)
245 2vt3_A REX, redox-sensing tran 98.3 4.3E-07 1.5E-11 73.1 3.3 79 10-93 85-167 (215)
246 1nvm_B Acetaldehyde dehydrogen 98.2 3.1E-06 1.1E-10 72.1 8.7 91 8-104 2-103 (312)
247 3fi9_A Malate dehydrogenase; s 98.2 7.2E-06 2.5E-10 70.7 10.7 69 8-79 6-84 (343)
248 4ew6_A D-galactose-1-dehydroge 98.2 2.8E-06 9.5E-11 73.1 8.0 94 7-115 22-123 (330)
249 1nyt_A Shikimate 5-dehydrogena 98.2 3.1E-06 1.1E-10 70.7 8.1 91 8-105 117-214 (271)
250 3i23_A Oxidoreductase, GFO/IDH 98.2 4.4E-06 1.5E-10 72.4 9.1 83 10-102 2-93 (349)
251 1l7d_A Nicotinamide nucleotide 98.2 2.3E-06 7.7E-11 75.2 7.1 88 9-105 171-294 (384)
252 4aj2_A L-lactate dehydrogenase 98.2 1.3E-05 4.4E-10 68.7 11.6 99 6-109 15-140 (331)
253 1leh_A Leucine dehydrogenase; 98.2 4.6E-06 1.6E-10 72.5 8.8 90 7-107 170-262 (364)
254 3oqb_A Oxidoreductase; structu 98.2 3.7E-06 1.3E-10 73.8 8.3 103 8-115 4-125 (383)
255 1gpj_A Glutamyl-tRNA reductase 98.2 4E-06 1.4E-10 74.2 8.5 70 9-82 166-238 (404)
256 2czc_A Glyceraldehyde-3-phosph 98.2 3.9E-06 1.3E-10 72.3 8.2 87 10-102 2-107 (334)
257 2eez_A Alanine dehydrogenase; 98.2 4.6E-06 1.6E-10 72.9 8.7 93 8-105 164-266 (369)
258 3pwz_A Shikimate dehydrogenase 98.2 5.3E-06 1.8E-10 69.3 8.6 92 8-105 118-215 (272)
259 2b0j_A 5,10-methenyltetrahydro 98.2 0.0001 3.5E-09 60.6 15.2 163 58-225 128-302 (358)
260 3ijp_A DHPR, dihydrodipicolina 98.1 3.1E-06 1.1E-10 70.9 6.1 100 6-113 17-127 (288)
261 3o9z_A Lipopolysaccaride biosy 98.1 8.4E-06 2.9E-10 69.5 8.5 96 10-115 3-114 (312)
262 3oa2_A WBPB; oxidoreductase, s 98.1 9.3E-06 3.2E-10 69.5 8.6 96 10-115 3-115 (318)
263 3mtj_A Homoserine dehydrogenas 98.1 2.6E-05 8.8E-10 69.4 11.1 92 6-104 6-109 (444)
264 1npy_A Hypothetical shikimate 98.1 1.1E-05 3.7E-10 67.4 8.1 68 10-83 119-187 (271)
265 1lc0_A Biliverdin reductase A; 98.1 8.4E-06 2.9E-10 68.9 7.4 85 5-102 2-93 (294)
266 1smk_A Malate dehydrogenase, g 98.0 1.2E-05 4.2E-10 68.9 8.3 95 9-109 7-129 (326)
267 1dih_A Dihydrodipicolinate red 98.0 3.7E-06 1.3E-10 70.3 4.9 99 9-115 4-113 (273)
268 1j5p_A Aspartate dehydrogenase 98.0 3.8E-06 1.3E-10 68.9 4.8 81 10-107 12-93 (253)
269 1oi7_A Succinyl-COA synthetase 98.0 1.1E-05 3.8E-10 67.9 7.8 94 9-112 6-103 (288)
270 4g65_A TRK system potassium up 98.0 1E-05 3.5E-10 72.7 8.1 75 9-88 2-85 (461)
271 3upl_A Oxidoreductase; rossman 98.0 1.9E-05 6.4E-10 70.1 9.5 87 9-103 22-137 (446)
272 2x0j_A Malate dehydrogenase; o 98.0 4E-05 1.4E-09 64.5 11.0 95 11-110 1-123 (294)
273 3ond_A Adenosylhomocysteinase; 98.0 2.5E-05 8.6E-10 69.9 9.7 89 8-106 263-353 (488)
274 2aef_A Calcium-gated potassium 98.0 2.1E-05 7.3E-10 64.0 8.3 99 9-114 8-115 (234)
275 1o6z_A MDH, malate dehydrogena 98.0 0.0001 3.4E-09 62.6 12.6 95 11-109 1-123 (303)
276 1xyg_A Putative N-acetyl-gamma 98.0 1.5E-05 5.1E-10 69.3 7.3 107 2-118 8-128 (359)
277 3ip3_A Oxidoreductase, putativ 97.9 7.6E-06 2.6E-10 70.5 5.2 84 10-102 2-95 (337)
278 2axq_A Saccharopine dehydrogen 97.9 1.8E-05 6.2E-10 71.1 7.7 88 9-104 22-118 (467)
279 1mld_A Malate dehydrogenase; o 97.9 4.5E-05 1.5E-09 65.0 9.7 96 11-110 1-122 (314)
280 1b7g_O Protein (glyceraldehyde 97.9 4.2E-05 1.4E-09 65.9 9.4 91 11-107 2-110 (340)
281 2fp4_A Succinyl-COA ligase [GD 97.9 6.1E-05 2.1E-09 63.9 9.7 95 9-112 12-110 (305)
282 1cf2_P Protein (glyceraldehyde 97.9 1.9E-05 6.3E-10 68.1 6.4 91 10-106 1-110 (337)
283 1ys4_A Aspartate-semialdehyde 97.9 2.5E-05 8.4E-10 67.8 7.3 91 10-107 8-116 (354)
284 4ina_A Saccharopine dehydrogen 97.9 2.8E-05 9.5E-10 68.7 7.7 90 10-104 1-106 (405)
285 1pjc_A Protein (L-alanine dehy 97.9 2.3E-05 7.8E-10 68.2 7.0 88 9-105 166-267 (361)
286 1ff9_A Saccharopine reductase; 97.9 2.1E-05 7.1E-10 70.5 6.6 88 9-104 2-98 (450)
287 2yv1_A Succinyl-COA ligase [AD 97.9 4.5E-05 1.6E-09 64.4 8.4 93 11-112 14-109 (294)
288 3jyo_A Quinate/shikimate dehyd 97.8 5.4E-05 1.8E-09 63.5 8.6 94 8-105 125-229 (283)
289 1u8f_O GAPDH, glyceraldehyde-3 97.8 9.7E-05 3.3E-09 63.5 10.1 92 10-107 3-124 (335)
290 2dt5_A AT-rich DNA-binding pro 97.8 4.2E-06 1.4E-10 67.1 1.4 80 9-93 79-162 (211)
291 1p9l_A Dihydrodipicolinate red 97.8 0.00017 5.9E-09 59.1 10.7 82 11-114 1-85 (245)
292 3ius_A Uncharacterized conserv 97.8 0.00013 4.4E-09 60.9 10.2 67 9-80 4-72 (286)
293 2ozp_A N-acetyl-gamma-glutamyl 97.8 3.3E-05 1.1E-09 66.7 6.6 92 8-108 2-102 (345)
294 3fbt_A Chorismate mutase and s 97.8 3.3E-05 1.1E-09 64.7 6.1 92 8-105 120-214 (282)
295 2yyy_A Glyceraldehyde-3-phosph 97.8 0.00012 4.1E-09 63.1 9.4 88 10-103 2-111 (343)
296 3hhp_A Malate dehydrogenase; M 97.7 0.00022 7.6E-09 60.6 10.8 95 11-109 1-122 (312)
297 2yv2_A Succinyl-COA synthetase 97.7 0.00011 3.8E-09 62.1 8.9 93 11-112 14-110 (297)
298 2hjs_A USG-1 protein homolog; 97.7 2.1E-05 7.3E-10 67.8 4.5 97 7-108 3-102 (340)
299 3qvo_A NMRA family protein; st 97.7 3E-05 1E-09 63.1 5.1 72 7-83 20-100 (236)
300 2ejw_A HDH, homoserine dehydro 97.7 1.7E-05 5.9E-10 68.0 3.7 88 9-103 2-96 (332)
301 2nqt_A N-acetyl-gamma-glutamyl 97.7 3.3E-05 1.1E-09 66.8 5.6 145 9-162 8-175 (352)
302 3keo_A Redox-sensing transcrip 97.7 1E-05 3.6E-10 64.6 2.2 79 10-93 84-170 (212)
303 1jw9_B Molybdopterin biosynthe 97.7 9.1E-05 3.1E-09 61.0 7.9 78 10-91 31-141 (249)
304 1b8p_A Protein (malate dehydro 97.7 0.00018 6.3E-09 61.7 9.9 99 9-108 4-136 (329)
305 3ff4_A Uncharacterized protein 97.7 4.1E-05 1.4E-09 55.8 4.8 94 10-117 4-101 (122)
306 3u95_A Glycoside hydrolase, fa 97.7 0.0003 1E-08 63.3 11.2 68 11-79 1-84 (477)
307 2ep5_A 350AA long hypothetical 97.6 9.1E-05 3.1E-09 64.1 6.9 93 8-107 2-110 (350)
308 3ing_A Homoserine dehydrogenas 97.6 9E-05 3.1E-09 63.4 6.7 94 8-104 2-116 (325)
309 1up7_A 6-phospho-beta-glucosid 97.6 0.00043 1.5E-08 61.2 11.3 112 10-125 2-163 (417)
310 3e8x_A Putative NAD-dependent 97.6 0.00024 8.1E-09 57.6 8.8 68 8-80 19-93 (236)
311 3dr3_A N-acetyl-gamma-glutamyl 97.6 9.9E-05 3.4E-09 63.4 6.6 93 10-108 4-109 (337)
312 3r6d_A NAD-dependent epimerase 97.6 0.00016 5.5E-09 58.0 7.4 66 11-81 6-83 (221)
313 3eag_A UDP-N-acetylmuramate:L- 97.6 0.0002 6.8E-09 61.3 8.3 69 9-82 3-79 (326)
314 1edz_A 5,10-methylenetetrahydr 97.6 4.3E-05 1.5E-09 64.9 3.9 93 5-106 172-276 (320)
315 2r00_A Aspartate-semialdehyde 97.6 4.2E-05 1.4E-09 65.8 3.6 96 9-108 2-99 (336)
316 3c8m_A Homoserine dehydrogenas 97.6 0.00013 4.5E-09 62.6 6.7 90 7-104 3-120 (331)
317 3h2s_A Putative NADH-flavin re 97.5 0.00071 2.4E-08 54.0 10.7 65 11-80 1-71 (224)
318 3do5_A HOM, homoserine dehydro 97.5 0.00021 7.3E-09 61.1 7.8 90 10-104 2-114 (327)
319 3dfz_A SIRC, precorrin-2 dehyd 97.5 0.00044 1.5E-08 55.7 9.1 129 9-160 30-163 (223)
320 3ew7_A LMO0794 protein; Q8Y8U8 97.5 0.00062 2.1E-08 54.2 10.0 64 11-80 1-70 (221)
321 1c1d_A L-phenylalanine dehydro 97.5 0.00045 1.5E-08 59.6 9.7 90 7-107 172-263 (355)
322 4dpl_A Malonyl-COA/succinyl-CO 97.5 0.00024 8.1E-09 61.6 7.6 94 9-108 6-113 (359)
323 4dpk_A Malonyl-COA/succinyl-CO 97.5 0.00024 8.1E-09 61.6 7.6 94 9-108 6-113 (359)
324 3e5r_O PP38, glyceraldehyde-3- 97.5 0.00042 1.4E-08 59.5 9.0 90 10-105 3-126 (337)
325 3i6i_A Putative leucoanthocyan 97.5 0.00022 7.5E-09 61.3 7.2 87 1-92 1-107 (346)
326 3tnl_A Shikimate dehydrogenase 97.4 0.0006 2.1E-08 57.9 9.0 93 8-105 152-263 (315)
327 1vl6_A Malate oxidoreductase; 97.4 0.0006 2.1E-08 59.1 9.0 94 7-108 189-297 (388)
328 3tum_A Shikimate dehydrogenase 97.4 0.00064 2.2E-08 56.5 8.9 92 9-105 124-225 (269)
329 3ngx_A Bifunctional protein fo 97.4 0.00029 1E-08 58.3 6.4 73 8-104 148-221 (276)
330 3t4e_A Quinate/shikimate dehyd 97.4 0.00052 1.8E-08 58.2 8.0 94 8-105 146-257 (312)
331 1hdo_A Biliverdin IX beta redu 97.4 0.00055 1.9E-08 53.8 7.7 66 10-80 3-76 (206)
332 3pwk_A Aspartate-semialdehyde 97.3 0.00015 5.2E-09 62.9 4.3 95 10-108 2-98 (366)
333 4a26_A Putative C-1-tetrahydro 97.3 0.00031 1.1E-08 58.8 6.0 76 7-104 162-238 (300)
334 1zud_1 Adenylyltransferase THI 97.3 0.00079 2.7E-08 55.4 8.2 89 10-104 28-149 (251)
335 7mdh_A Protein (malate dehydro 97.3 0.00094 3.2E-08 58.0 9.0 101 9-109 31-162 (375)
336 2c2x_A Methylenetetrahydrofola 97.3 0.00045 1.5E-08 57.3 6.5 74 7-104 155-231 (281)
337 3l07_A Bifunctional protein fo 97.3 0.00068 2.3E-08 56.4 7.6 74 7-104 158-232 (285)
338 4h7p_A Malate dehydrogenase; s 97.3 0.0024 8.1E-08 54.9 11.2 102 7-109 21-154 (345)
339 3hsk_A Aspartate-semialdehyde 97.3 0.00037 1.3E-08 60.8 6.0 95 8-108 17-127 (381)
340 3dhn_A NAD-dependent epimerase 97.3 0.00015 5.2E-09 58.2 3.3 67 9-81 3-77 (227)
341 1lnq_A MTHK channels, potassiu 97.2 0.0015 5.1E-08 56.0 9.4 86 10-102 115-208 (336)
342 3rui_A Ubiquitin-like modifier 97.2 0.0019 6.6E-08 55.2 9.8 89 10-104 34-170 (340)
343 3e48_A Putative nucleoside-dip 97.2 0.00078 2.7E-08 56.1 7.3 66 11-81 1-75 (289)
344 2dvm_A Malic enzyme, 439AA lon 97.2 0.0022 7.5E-08 56.8 10.3 96 8-109 184-300 (439)
345 3p2o_A Bifunctional protein fo 97.2 0.00074 2.5E-08 56.2 6.8 74 7-104 157-231 (285)
346 1nvt_A Shikimate 5'-dehydrogen 97.2 0.00083 2.9E-08 56.3 7.2 90 8-105 126-230 (287)
347 1b0a_A Protein (fold bifunctio 97.1 0.00071 2.4E-08 56.3 6.1 74 7-104 156-230 (288)
348 1qyc_A Phenylcoumaran benzylic 97.1 0.0011 3.9E-08 55.6 7.6 78 10-92 4-101 (308)
349 1y1p_A ARII, aldehyde reductas 97.1 0.0023 7.9E-08 54.4 9.6 73 2-79 3-91 (342)
350 3cps_A Glyceraldehyde 3-phosph 97.1 0.0026 9E-08 54.8 9.7 94 7-106 14-139 (354)
351 1a4i_A Methylenetetrahydrofola 97.1 0.001 3.4E-08 55.8 6.8 75 7-105 162-237 (301)
352 1qyd_A Pinoresinol-lariciresin 97.1 0.0013 4.5E-08 55.3 7.8 66 10-80 4-85 (313)
353 3gpi_A NAD-dependent epimerase 97.1 0.00028 9.6E-09 58.8 3.5 63 8-79 1-71 (286)
354 3dqp_A Oxidoreductase YLBE; al 97.1 0.00072 2.5E-08 54.0 5.7 63 11-80 1-72 (219)
355 2r6j_A Eugenol synthase 1; phe 97.1 0.001 3.4E-08 56.3 6.8 78 10-92 11-103 (318)
356 5mdh_A Malate dehydrogenase; o 97.0 0.0027 9.2E-08 54.4 9.1 69 10-79 3-87 (333)
357 3lk7_A UDP-N-acetylmuramoylala 97.0 0.0013 4.5E-08 58.8 7.4 69 9-82 8-85 (451)
358 4a5o_A Bifunctional protein fo 97.0 0.0012 4.2E-08 54.8 6.5 74 7-104 158-232 (286)
359 4gsl_A Ubiquitin-like modifier 97.0 0.0033 1.1E-07 57.7 9.7 35 10-48 326-360 (615)
360 2ph5_A Homospermidine synthase 96.9 0.0016 5.6E-08 58.0 6.9 92 11-106 14-115 (480)
361 2wm3_A NMRA-like family domain 96.9 0.0017 5.9E-08 54.3 6.8 66 10-80 5-81 (299)
362 2x5j_O E4PDH, D-erythrose-4-ph 96.9 0.0031 1.1E-07 54.1 8.4 91 11-106 3-126 (339)
363 1ebf_A Homoserine dehydrogenas 96.9 0.00046 1.6E-08 59.8 3.2 88 9-103 3-113 (358)
364 1hye_A L-lactate/malate dehydr 96.9 0.0033 1.1E-07 53.4 8.5 66 11-79 1-82 (313)
365 1vkn_A N-acetyl-gamma-glutamyl 96.9 0.0017 5.7E-08 55.9 6.6 101 10-118 13-123 (351)
366 1gad_O D-glyceraldehyde-3-phos 96.9 0.0055 1.9E-07 52.3 9.6 92 11-108 2-122 (330)
367 1t4b_A Aspartate-semialdehyde 96.8 0.0013 4.6E-08 57.1 5.6 93 10-107 1-100 (367)
368 2x4g_A Nucleoside-diphosphate- 96.8 0.0013 4.5E-08 56.0 5.5 66 9-79 12-85 (342)
369 4gx0_A TRKA domain protein; me 96.8 0.0016 5.4E-08 60.0 6.3 96 11-114 349-452 (565)
370 3b1j_A Glyceraldehyde 3-phosph 96.8 0.0041 1.4E-07 53.3 8.5 93 11-105 3-124 (339)
371 3tz6_A Aspartate-semialdehyde 96.8 0.00065 2.2E-08 58.4 3.4 94 11-108 2-97 (344)
372 2gas_A Isoflavone reductase; N 96.8 0.0022 7.4E-08 53.8 6.6 78 10-92 2-100 (307)
373 3h8v_A Ubiquitin-like modifier 96.8 0.0039 1.3E-07 52.3 7.9 36 9-48 35-70 (292)
374 1y7t_A Malate dehydrogenase; N 96.7 0.0026 9E-08 54.3 6.7 70 9-79 3-88 (327)
375 3c1o_A Eugenol synthase; pheny 96.7 0.0028 9.7E-08 53.5 6.8 79 9-92 3-101 (321)
376 2d2i_A Glyceraldehyde 3-phosph 96.7 0.0048 1.6E-07 53.5 8.2 80 11-91 3-111 (380)
377 3vh1_A Ubiquitin-like modifier 96.7 0.0078 2.7E-07 55.2 9.6 34 10-47 327-360 (598)
378 3cmc_O GAPDH, glyceraldehyde-3 96.7 0.0064 2.2E-07 52.0 8.5 90 10-105 1-121 (334)
379 3m2p_A UDP-N-acetylglucosamine 96.7 0.0018 6E-08 54.6 4.9 62 10-79 2-70 (311)
380 4g65_A TRK system potassium up 96.6 0.014 4.6E-07 52.3 10.7 88 9-102 234-331 (461)
381 2gn4_A FLAA1 protein, UDP-GLCN 96.6 0.0038 1.3E-07 53.6 6.7 76 1-80 12-100 (344)
382 2csu_A 457AA long hypothetical 96.6 0.0055 1.9E-07 54.8 7.8 90 8-109 6-100 (457)
383 1hdg_O Holo-D-glyceraldehyde-3 96.6 0.0086 2.9E-07 51.2 8.5 91 11-105 1-122 (332)
384 1lu9_A Methylene tetrahydromet 96.6 0.0041 1.4E-07 52.0 6.4 44 8-56 117-161 (287)
385 4hv4_A UDP-N-acetylmuramate--L 96.5 0.0058 2E-07 55.3 7.6 69 9-82 21-94 (494)
386 1xq6_A Unknown protein; struct 96.5 0.0038 1.3E-07 50.5 5.8 66 8-79 2-77 (253)
387 2jl1_A Triphenylmethane reduct 96.5 0.0028 9.7E-08 52.5 5.0 65 11-80 1-75 (287)
388 3h5n_A MCCB protein; ubiquitin 96.5 0.018 6.2E-07 49.7 10.0 34 10-47 118-151 (353)
389 2zcu_A Uncharacterized oxidore 96.5 0.0086 2.9E-07 49.5 7.8 64 12-80 1-74 (286)
390 2gdz_A NAD+-dependent 15-hydro 96.4 0.016 5.4E-07 47.6 9.3 88 7-106 4-95 (267)
391 2yv3_A Aspartate-semialdehyde 96.4 0.0016 5.3E-08 55.9 3.1 91 11-108 1-95 (331)
392 3slg_A PBGP3 protein; structur 96.4 0.0018 6.1E-08 56.0 3.3 67 8-79 22-99 (372)
393 3hn7_A UDP-N-acetylmuramate-L- 96.4 0.0092 3.1E-07 54.4 8.1 69 9-82 18-93 (524)
394 1y8q_A Ubiquitin-like 1 activa 96.4 0.022 7.4E-07 49.0 9.9 89 10-104 36-156 (346)
395 4gx0_A TRKA domain protein; me 96.3 0.03 1E-06 51.4 11.4 69 10-84 127-204 (565)
396 1rm4_O Glyceraldehyde 3-phosph 96.3 0.024 8.3E-07 48.4 9.9 94 11-108 2-125 (337)
397 3h2z_A Mannitol-1-phosphate 5- 96.3 0.024 8.2E-07 49.3 9.7 94 11-109 1-125 (382)
398 3pzr_A Aspartate-semialdehyde 96.2 0.0055 1.9E-07 53.1 5.5 93 11-107 1-99 (370)
399 3i1j_A Oxidoreductase, short c 96.2 0.032 1.1E-06 45.0 9.9 86 8-106 12-103 (247)
400 3ruf_A WBGU; rossmann fold, UD 96.2 0.013 4.3E-07 50.1 7.7 68 8-80 23-109 (351)
401 3two_A Mannitol dehydrogenase; 96.2 0.015 5E-07 49.9 7.9 87 9-104 176-264 (348)
402 1p3d_A UDP-N-acetylmuramate--a 96.1 0.016 5.5E-07 52.1 8.3 65 9-78 17-84 (475)
403 1kyq_A Met8P, siroheme biosynt 96.1 0.006 2.1E-07 50.6 5.0 35 9-48 12-46 (274)
404 1pjq_A CYSG, siroheme synthase 96.1 0.02 6.7E-07 51.2 8.8 80 1-85 1-86 (457)
405 2f00_A UDP-N-acetylmuramate--L 96.1 0.017 5.9E-07 52.1 8.4 65 9-78 18-85 (491)
406 2c5a_A GDP-mannose-3', 5'-epim 96.1 0.0053 1.8E-07 53.3 4.8 66 9-79 28-101 (379)
407 3uw3_A Aspartate-semialdehyde 96.1 0.008 2.8E-07 52.2 5.7 95 9-107 3-103 (377)
408 3uog_A Alcohol dehydrogenase; 96.0 0.027 9.4E-07 48.6 9.0 87 9-104 189-286 (363)
409 3nkl_A UDP-D-quinovosamine 4-d 96.0 0.017 5.7E-07 42.5 6.5 78 9-91 3-88 (141)
410 3a06_A 1-deoxy-D-xylulose 5-ph 96.0 0.044 1.5E-06 47.0 9.8 80 9-92 2-107 (376)
411 4b4o_A Epimerase family protei 96.0 0.0045 1.5E-07 51.7 3.7 58 11-79 1-59 (298)
412 2g82_O GAPDH, glyceraldehyde-3 96.0 0.029 9.8E-07 47.9 8.6 88 11-105 1-119 (331)
413 1e3j_A NADP(H)-dependent ketos 96.0 0.077 2.6E-06 45.4 11.5 87 9-104 168-270 (352)
414 3o38_A Short chain dehydrogena 95.9 0.04 1.4E-06 45.1 9.3 85 9-106 21-110 (266)
415 2jah_A Clavulanic acid dehydro 95.9 0.025 8.6E-07 45.9 8.0 87 5-105 2-92 (247)
416 3tjr_A Short chain dehydrogena 95.9 0.043 1.5E-06 46.0 9.6 83 10-106 31-117 (301)
417 1iy8_A Levodione reductase; ox 95.9 0.051 1.7E-06 44.5 9.8 84 10-105 13-100 (267)
418 1pqw_A Polyketide synthase; ro 95.9 0.018 6.1E-07 45.0 6.6 47 8-59 37-84 (198)
419 1rjw_A ADH-HT, alcohol dehydro 95.9 0.029 9.9E-07 47.9 8.4 87 9-104 164-260 (339)
420 1yo6_A Putative carbonyl reduc 95.8 0.041 1.4E-06 44.2 8.8 81 9-106 2-90 (250)
421 3fpf_A Mtnas, putative unchara 95.8 0.07 2.4E-06 44.7 10.3 90 8-103 121-220 (298)
422 1xgk_A Nitrogen metabolite rep 95.8 0.023 8E-07 48.8 7.5 66 10-80 5-82 (352)
423 4e6p_A Probable sorbitol dehyd 95.8 0.072 2.5E-06 43.4 10.2 81 9-106 7-91 (259)
424 3f1l_A Uncharacterized oxidore 95.8 0.056 1.9E-06 43.9 9.4 86 8-106 10-101 (252)
425 3ucx_A Short chain dehydrogena 95.8 0.036 1.2E-06 45.4 8.2 86 6-105 7-96 (264)
426 3l6e_A Oxidoreductase, short-c 95.7 0.049 1.7E-06 43.8 8.8 81 9-106 2-86 (235)
427 2o23_A HADH2 protein; HSD17B10 95.7 0.053 1.8E-06 44.1 9.1 80 9-105 11-94 (265)
428 2ydy_A Methionine adenosyltran 95.7 0.016 5.5E-07 48.6 6.0 64 10-79 2-68 (315)
429 1tt5_B Ubiquitin-activating en 95.7 0.028 9.7E-07 49.8 7.7 77 10-90 40-148 (434)
430 3lf2_A Short chain oxidoreduct 95.7 0.078 2.7E-06 43.4 10.1 86 8-105 6-95 (265)
431 2o7s_A DHQ-SDH PR, bifunctiona 95.7 0.016 5.6E-07 52.7 6.4 43 9-56 363-405 (523)
432 3sxp_A ADP-L-glycero-D-mannohe 95.7 0.016 5.3E-07 49.9 6.0 44 1-49 1-47 (362)
433 3tfo_A Putative 3-oxoacyl-(acy 95.7 0.026 9E-07 46.4 7.0 84 8-105 2-89 (264)
434 4hb9_A Similarities with proba 95.6 0.01 3.5E-07 51.5 4.6 34 10-48 1-34 (412)
435 1zem_A Xylitol dehydrogenase; 95.6 0.11 3.7E-06 42.4 10.6 85 7-105 4-92 (262)
436 3imf_A Short chain dehydrogena 95.6 0.025 8.5E-07 46.2 6.6 86 7-106 3-92 (257)
437 3ged_A Short-chain dehydrogena 95.6 0.059 2E-06 44.0 8.7 77 11-105 3-83 (247)
438 1tt5_A APPBP1, amyloid protein 95.6 0.059 2E-06 49.0 9.5 78 10-91 32-144 (531)
439 1r0k_A 1-deoxy-D-xylulose 5-ph 95.6 0.073 2.5E-06 46.2 9.6 88 10-103 4-122 (388)
440 3ip1_A Alcohol dehydrogenase, 95.6 0.12 4E-06 45.3 11.2 93 8-104 212-317 (404)
441 1vm6_A DHPR, dihydrodipicolina 95.6 0.056 1.9E-06 43.3 8.2 81 10-114 12-93 (228)
442 2pzm_A Putative nucleotide sug 95.6 0.0049 1.7E-07 52.4 2.3 72 3-79 13-96 (330)
443 1hxh_A 3BETA/17BETA-hydroxyste 95.6 0.077 2.6E-06 43.1 9.5 81 8-105 4-88 (253)
444 1sb8_A WBPP; epimerase, 4-epim 95.6 0.03 1E-06 47.8 7.3 68 8-80 25-111 (352)
445 2pnf_A 3-oxoacyl-[acyl-carrier 95.5 0.1 3.5E-06 41.9 10.1 86 8-106 5-94 (248)
446 3ftp_A 3-oxoacyl-[acyl-carrier 95.5 0.043 1.5E-06 45.2 7.9 82 10-105 28-113 (270)
447 1yb1_A 17-beta-hydroxysteroid 95.5 0.054 1.8E-06 44.6 8.4 85 8-106 29-117 (272)
448 2rh8_A Anthocyanidin reductase 95.5 0.023 7.8E-07 48.2 6.3 66 9-79 8-88 (338)
449 4dqx_A Probable oxidoreductase 95.5 0.084 2.9E-06 43.6 9.6 79 11-106 28-110 (277)
450 1duv_G Octase-1, ornithine tra 95.5 0.13 4.5E-06 43.7 10.8 68 7-79 152-232 (333)
451 1dxh_A Ornithine carbamoyltran 95.5 0.13 4.5E-06 43.7 10.8 67 8-79 153-232 (335)
452 2a9f_A Putative malic enzyme ( 95.5 0.02 6.8E-07 49.8 5.8 95 7-109 185-293 (398)
453 3enk_A UDP-glucose 4-epimerase 95.5 0.014 4.6E-07 49.6 4.8 67 8-79 3-86 (341)
454 3n74_A 3-ketoacyl-(acyl-carrie 95.5 0.079 2.7E-06 43.1 9.3 80 10-106 9-92 (261)
455 2pd6_A Estradiol 17-beta-dehyd 95.5 0.074 2.5E-06 43.2 9.2 92 8-106 5-101 (264)
456 3sju_A Keto reductase; short-c 95.5 0.041 1.4E-06 45.6 7.6 86 7-106 21-110 (279)
457 4egf_A L-xylulose reductase; s 95.5 0.11 3.6E-06 42.7 10.1 83 11-106 21-107 (266)
458 3rkr_A Short chain oxidoreduct 95.5 0.058 2E-06 44.1 8.4 82 11-106 30-115 (262)
459 3h9e_O Glyceraldehyde-3-phosph 95.5 0.11 3.8E-06 44.2 10.2 44 9-56 6-51 (346)
460 3oh8_A Nucleoside-diphosphate 95.5 0.0092 3.2E-07 54.2 3.8 62 10-79 147-209 (516)
461 2cdc_A Glucose dehydrogenase g 95.5 0.035 1.2E-06 47.9 7.4 86 10-104 181-277 (366)
462 1p0f_A NADP-dependent alcohol 95.5 0.13 4.6E-06 44.3 11.1 88 9-104 191-292 (373)
463 1w6u_A 2,4-dienoyl-COA reducta 95.5 0.17 5.6E-06 42.1 11.4 85 9-106 25-113 (302)
464 3nyw_A Putative oxidoreductase 95.4 0.051 1.7E-06 44.2 8.0 85 9-105 6-95 (250)
465 1pvv_A Otcase, ornithine carba 95.4 0.19 6.6E-06 42.4 11.6 67 8-79 153-231 (315)
466 1yxm_A Pecra, peroxisomal tran 95.4 0.13 4.4E-06 42.8 10.6 89 9-106 17-109 (303)
467 2jhf_A Alcohol dehydrogenase E 95.4 0.16 5.6E-06 43.8 11.5 88 9-104 191-292 (374)
468 3ai3_A NADPH-sorbose reductase 95.4 0.14 4.9E-06 41.6 10.7 86 8-106 5-94 (263)
469 2h6e_A ADH-4, D-arabinose 1-de 95.4 0.046 1.6E-06 46.7 7.9 87 9-104 170-268 (344)
470 4id9_A Short-chain dehydrogena 95.4 0.016 5.6E-07 49.3 5.0 61 8-79 17-85 (347)
471 3s2e_A Zinc-containing alcohol 95.4 0.036 1.2E-06 47.2 7.2 87 9-104 166-262 (340)
472 3gaf_A 7-alpha-hydroxysteroid 95.4 0.043 1.5E-06 44.8 7.4 83 9-105 11-97 (256)
473 1e3i_A Alcohol dehydrogenase, 95.4 0.17 5.8E-06 43.7 11.5 88 9-104 195-296 (376)
474 2bka_A CC3, TAT-interacting pr 95.4 0.014 4.8E-07 47.0 4.3 69 9-80 17-93 (242)
475 3rwb_A TPLDH, pyridoxal 4-dehy 95.4 0.1 3.6E-06 42.2 9.6 82 8-106 4-89 (247)
476 3dii_A Short-chain dehydrogena 95.4 0.053 1.8E-06 43.9 7.8 77 11-105 3-83 (247)
477 1hdc_A 3-alpha, 20 beta-hydrox 95.4 0.11 3.8E-06 42.2 9.8 81 8-105 3-87 (254)
478 1xg5_A ARPG836; short chain de 95.4 0.1 3.4E-06 43.0 9.6 85 9-105 31-119 (279)
479 2a4k_A 3-oxoacyl-[acyl carrier 95.4 0.11 3.7E-06 42.6 9.7 80 9-105 5-88 (263)
480 1v3u_A Leukotriene B4 12- hydr 95.3 0.05 1.7E-06 46.2 7.9 46 9-59 145-191 (333)
481 2x5o_A UDP-N-acetylmuramoylala 95.3 0.013 4.5E-07 52.1 4.3 66 8-79 3-72 (439)
482 4a7p_A UDP-glucose dehydrogena 95.3 0.023 7.9E-07 50.6 5.9 100 8-115 320-432 (446)
483 2d8a_A PH0655, probable L-thre 95.3 0.064 2.2E-06 45.9 8.5 88 9-104 167-266 (348)
484 1cdo_A Alcohol dehydrogenase; 95.3 0.19 6.6E-06 43.3 11.7 88 9-104 192-293 (374)
485 3qiv_A Short-chain dehydrogena 95.3 0.057 1.9E-06 43.8 7.8 82 10-105 9-94 (253)
486 1oc2_A DTDP-glucose 4,6-dehydr 95.3 0.018 6E-07 49.1 4.9 66 10-80 4-84 (348)
487 3r1i_A Short-chain type dehydr 95.3 0.05 1.7E-06 45.0 7.5 83 10-106 32-118 (276)
488 1zk4_A R-specific alcohol dehy 95.3 0.12 4.2E-06 41.6 9.8 82 8-105 4-90 (251)
489 4g81_D Putative hexonate dehyd 95.3 0.067 2.3E-06 43.8 8.2 80 12-105 10-94 (255)
490 1yde_A Retinal dehydrogenase/r 95.3 0.12 4.2E-06 42.4 9.8 80 8-105 7-90 (270)
491 1yqd_A Sinapyl alcohol dehydro 95.3 0.039 1.4E-06 47.6 7.1 87 9-104 187-281 (366)
492 2c0c_A Zinc binding alcohol de 95.3 0.038 1.3E-06 47.6 7.0 72 9-85 163-245 (362)
493 2bll_A Protein YFBG; decarboxy 95.2 0.017 5.7E-07 49.0 4.6 64 11-79 1-75 (345)
494 3awd_A GOX2181, putative polyo 95.2 0.058 2E-06 43.8 7.7 83 9-105 12-98 (260)
495 4a0s_A Octenoyl-COA reductase/ 95.2 0.087 3E-06 46.7 9.4 89 7-104 218-335 (447)
496 3d6n_B Aspartate carbamoyltran 95.2 0.028 9.7E-07 46.9 5.6 69 8-82 144-215 (291)
497 2q3e_A UDP-glucose 6-dehydroge 95.2 0.078 2.7E-06 47.4 9.0 98 8-110 327-448 (467)
498 3kkj_A Amine oxidase, flavin-c 95.2 0.02 6.9E-07 45.9 4.7 33 11-48 3-35 (336)
499 2ehd_A Oxidoreductase, oxidore 95.2 0.11 3.8E-06 41.4 9.0 78 11-106 6-87 (234)
500 4dvj_A Putative zinc-dependent 95.2 0.11 3.6E-06 44.9 9.5 87 9-104 171-269 (363)
No 1
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=100.00 E-value=4.6e-50 Score=340.93 Aligned_cols=262 Identities=38% Similarity=0.591 Sum_probs=245.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~~v 87 (272)
++|||+|||+|+||++|+.+|.++|+ ++.+|++| +|++++++++.+ .|+..+.++.++++++|+||+||||+.+.++
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~-~~~~V~v~-dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~~~~~v 79 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGY-DPNRICVT-NRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKMV 79 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTC-CGGGEEEE-CSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGGGHHHH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCC-CCCeEEEE-eCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHHHHHHH
Confidence 56899999999999999999999996 66689999 999999999887 5998888888999999999999999999999
Q ss_pred HHHhchh-cCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCCeE
Q 024121 88 AMQIRPL-LSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIW 165 (272)
Q Consensus 88 ~~~l~~~-l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~~ 165 (272)
++++.++ ++++++|||+++|++.+.+++.++ +.+++|+|||+|..++.|.+.+++++..++++.+.++++|+.+|+.+
T Consensus 80 l~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~~~~~~~~~~~v~~l~~~iG~~~ 159 (280)
T 3tri_A 80 CEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLVI 159 (280)
T ss_dssp HHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHGGGEEEE
T ss_pred HHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeCCCCCHHHHHHHHHHHHHCCCeE
Confidence 9999998 888889999999999999999887 47899999999999999999999888889999999999999999876
Q ss_pred Ec-CcccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCcchHH
Q 024121 166 RA-DEKLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTI 242 (272)
Q Consensus 166 ~~-~e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~g~t~ 242 (272)
++ +|+++|.+++++ +|+|++.+++++.+++.+.|++++++++++.+++.|+.+++.+++.+|..|++++++|||+|+
T Consensus 160 ~v~~E~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~~G~a~~~~~~~~~p~~l~~~v~spgGtT~ 239 (280)
T 3tri_A 160 WVSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTTE 239 (280)
T ss_dssp ECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHCCTTSHHH
T ss_pred EECCHHHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhccCCChHHH
Confidence 65 788999999988 899999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024121 243 AGIHELEKSGFRGILMNAVVAAAKRSRELS 272 (272)
Q Consensus 243 ~~l~~l~~~~~~~~~~~~~~~~~~r~~~~~ 272 (272)
++++.|+++||+..+.++++++++|++||+
T Consensus 240 ~~l~~le~~g~~~~~~~av~aa~~r~~el~ 269 (280)
T 3tri_A 240 QAIKVLESGNLRELFIKALTAAVNRAKELS 269 (280)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999974
No 2
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=100.00 E-value=2.4e-44 Score=300.85 Aligned_cols=242 Identities=35% Similarity=0.618 Sum_probs=196.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
+|||+|||+|+||.+|+++|.++|+.++.+|++| +|++++++++.+ .|+..+.++.++++++|+||+|||++++++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~~~~v~ 80 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICS-DLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDLYASII 80 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEE-CSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTTHHHHC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEE-eCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHHHHHHH
Confidence 4799999999999999999999997666789999 999999998876 69988888899999999999999999999999
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCCeEEc
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRA 167 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 167 (272)
+++.++++++++|||++++++.+.+++.++ +.++++.||+.|...+.|.+.+++++..+++.++.++++|+.+|..+++
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~ 160 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNEMVTEKDLEDVLNIFNSFGQTEIV 160 (247)
T ss_dssp ---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHGGGEEEEEC
T ss_pred HHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHhCCCEEEe
Confidence 999999989999999999999999998886 4689999999999999998888888778999999999999999998778
Q ss_pred CcccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCcchHHHHH
Q 024121 168 DEKLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGI 245 (272)
Q Consensus 168 ~e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~g~t~~~l 245 (272)
+|+.++.+++++ +|+|++.+++++.+++++.|+|++++++++.+++.|+++++.+++.+|..|+++++||||+|++++
T Consensus 161 ~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~~~~~~~~p~~l~~~v~spgG~t~~gl 240 (247)
T 3gt0_A 161 SEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKMVLETGIHPGELKDMVCSPGGTTIEAV 240 (247)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSCC--------------------
T ss_pred CHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCCCchHHHHH
Confidence 999999999887 899999999999999999999999999999999999999998889999999999999999999999
Q ss_pred HHHHhCC
Q 024121 246 HELEKSG 252 (272)
Q Consensus 246 ~~l~~~~ 252 (272)
+.||++|
T Consensus 241 ~~le~~~ 247 (247)
T 3gt0_A 241 ATLEEKG 247 (247)
T ss_dssp -------
T ss_pred HHHHhCc
Confidence 9999864
No 3
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=100.00 E-value=7.1e-42 Score=296.29 Aligned_cols=268 Identities=45% Similarity=0.710 Sum_probs=235.5
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH--HHHHHHHcCceeecCchhhhccCCEEEEeeCc
Q 024121 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLK--RRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~--~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~ 81 (272)
-+.++++|||+|||+|+||++|+.+|.++|+.+..+|++| +|+++ +.+.+.+.|+.+..++.++++++|+||+|||+
T Consensus 16 ~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~-~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~ 94 (322)
T 2izz_A 16 ENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMAS-SPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKP 94 (322)
T ss_dssp ------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEE-CSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCG
T ss_pred chhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEE-CCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCH
Confidence 3456677899999999999999999999992111299999 99986 78888778998888888889999999999999
Q ss_pred ccHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC----CCCEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHHHH
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG----HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKL 157 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~----~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~l 157 (272)
+++.+++.++.+.++++++|||++++++.+.+++.++ ..++++.+|+.|.....|.+++++++..+++..+.++++
T Consensus 95 ~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~~v~~~g~~~~~~~~~~v~~l 174 (322)
T 2izz_A 95 HIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQL 174 (322)
T ss_dssp GGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 9999999999988888999999999999887776653 357899999999988888888888876778999999999
Q ss_pred hhhcCCeEEcCcccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcC
Q 024121 158 FGSVGKIWRADEKLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVA 235 (272)
Q Consensus 158 l~~~G~~~~~~e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 235 (272)
|+.+|..+++.++.++.+++++ +|+|++.+++++.+++.+.|++++++++++.+++.++.+++.+++..|..|++.++
T Consensus 175 l~~~G~~~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~~~~~~g~~~~~~~~~~~p~~l~~~v~ 254 (322)
T 2izz_A 175 LSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVS 254 (322)
T ss_dssp HHTTEEEEECCGGGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHC
T ss_pred HHhCCCEEEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCC
Confidence 9999977777889999999887 89999999999999999999999999999999999999888766678999999999
Q ss_pred CCcchHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024121 236 SPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 272 (272)
Q Consensus 236 ~~~g~t~~~l~~l~~~~~~~~~~~~~~~~~~r~~~~~ 272 (272)
+|+|+|+.+++.+++.+|+..+.+++.++++|++|++
T Consensus 255 sp~g~t~~~l~~l~~~g~~~~~~~av~~~~~ra~e~~ 291 (322)
T 2izz_A 255 SPGGATIHALHVLESGGFRSLLINAVEASCIRTRELQ 291 (322)
T ss_dssp CTTSHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999863
No 4
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=100.00 E-value=2.3e-39 Score=272.42 Aligned_cols=254 Identities=32% Similarity=0.560 Sum_probs=229.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~~v 87 (272)
++|||+|||+|.||.+++..|.+.|+ +|.+| +|++++.+.+.+ .|+..+.+..++++++|+||+|+|++.+.++
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g~----~v~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~~~~~~~v 76 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTPH----ELIIS-GSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETV 76 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSSC----EEEEE-CSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGGGHHHH
T ss_pred CccEEEEECCCHHHHHHHHHHHhCCC----eEEEE-CCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeCcHhHHHH
Confidence 45799999999999999999999998 99999 999999988876 5888777888888999999999999998888
Q ss_pred HHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCCeEE
Q 024121 88 AMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWR 166 (272)
Q Consensus 88 ~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~ 166 (272)
+.++ .+++++|++.++++.+.+++.++ +.++++.+|++|...+.|.+.++++...+++..+.++++|+.+|+.++
T Consensus 77 ~~~l----~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G~~~~ 152 (259)
T 2ahr_A 77 LKPL----HFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFD 152 (259)
T ss_dssp HTTS----CCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEEEE
T ss_pred HHHh----ccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 8765 37889999988999988888877 358899999999988888877777766789999999999999997688
Q ss_pred cCcccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCcchHHHH
Q 024121 167 ADEKLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAG 244 (272)
Q Consensus 167 ~~e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~g~t~~~ 244 (272)
+++++++.+++++ +|+|++.+.+++.+++.+.|+|++++++++.+++.++.+++.+++.+|..|.+.+++|+|+|+.+
T Consensus 153 ~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~p~~~~~~~ 232 (259)
T 2ahr_A 153 ISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAG 232 (259)
T ss_dssp CCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHCCTTSHHHHH
T ss_pred ecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCChhHHHH
Confidence 8999999999876 88999999999999999999999999999999999999888766667999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 245 IHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 245 l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
++.|++.||+..+.++++++++|++||
T Consensus 233 ~~~l~~~g~~~~~~~a~~~~~~r~~~~ 259 (259)
T 2ahr_A 233 LMELERLGLTATVSSAIDKTIDKAKSL 259 (259)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCChHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999986
No 5
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=100.00 E-value=4.2e-39 Score=271.26 Aligned_cols=257 Identities=37% Similarity=0.624 Sum_probs=228.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v 87 (272)
|++|||+|||+|+||++|+.+|.++|+.++.+|++| +|++++ .|+.+..++.++++++|+||+|||+++++++
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~-~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~v 74 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYY-GPSKKN------TTLNYMSSNEELARHCDIIVCAVKPDIAGSV 74 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEE-CSSCCS------SSSEECSCHHHHHHHCSEEEECSCTTTHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEE-eCCccc------CceEEeCCHHHHHhcCCEEEEEeCHHHHHHH
Confidence 356899999999999999999999992111299999 999876 5788777888888999999999999999999
Q ss_pred HHHhchhcCCCCEEEEEcCCCCHHHHHHHhCC-CCEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCCeEE
Q 024121 88 AMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGH-SRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWR 166 (272)
Q Consensus 88 ~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~~-~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~ 166 (272)
+.++.+++ +++++++++++++.+.+++.++. .++++++|++|...+.|.+.+++++..+++..+.++++|+.+|..++
T Consensus 75 ~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~G~~~~ 153 (262)
T 2rcy_A 75 LNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSNKNVNSTDKKYVNDIFNSCGIIHE 153 (262)
T ss_dssp HHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 99998888 67889999999999988888874 36889999999988888777777766788999999999999998777
Q ss_pred cCcccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCcchHHHH
Q 024121 167 ADEKLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAG 244 (272)
Q Consensus 167 ~~e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~g~t~~~ 244 (272)
++++.++.+++++ +|++++.+++++.+++.+.|++++.+.+++.+++.++.++..+++.+|.+|.+.+.+|+++++++
T Consensus 154 ~~~~~~~~~~a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~t~~~~ 233 (262)
T 2rcy_A 154 IKEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKGSVEMVKKSDQPVQQLKDNIVSPGGITAVG 233 (262)
T ss_dssp CCGGGHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCCTTSHHHHH
T ss_pred eCHHHccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCChHHHHH
Confidence 8988899999887 89999999999999899999999999999999999999887655678999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024121 245 IHELEKSGFRGILMNAVVAAAKRSRELS 272 (272)
Q Consensus 245 l~~l~~~~~~~~~~~~~~~~~~r~~~~~ 272 (272)
++.|++.+|+..+.++++++++|++|++
T Consensus 234 l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 261 (262)
T 2rcy_A 234 LYSLEKNSFKYTVMNAVEAACEKSKAMG 261 (262)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999975
No 6
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=100.00 E-value=7.4e-38 Score=263.75 Aligned_cols=253 Identities=31% Similarity=0.534 Sum_probs=228.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 11 FILGFIGAGKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g-~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
|||+|||+|+||++++.+|.++| + +|++| +|++++.+.+.+ .|+....+..+++ ++|+||+|||++++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~----~v~~~-~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~~~~~~~v~ 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGY----RIYIA-NRGAEKRERLEKELGVETSATLPELH-SDDVLILAVKPQDMEAAC 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSC----EEEEE-CSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSCHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCC----eEEEE-CCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeCchhHHHHH
Confidence 68999999999999999999999 8 99999 999999998887 4888887888888 999999999999999999
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHHHHHHhCC-CCEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCCeEEc
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTGH-SRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRA 167 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~l~~~~~~-~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~ 167 (272)
.++.+ + +++|+|++++++.+.+++.++. .++++.+|+.|...+.|.+.++++...+++..+.++++|+.+|..+++
T Consensus 75 ~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~~~ 151 (263)
T 1yqg_A 75 KNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWL 151 (263)
T ss_dssp TTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEEEC
T ss_pred HHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEEEe
Confidence 88776 4 8899998899999888888873 578888999998888888777777666889999999999999966677
Q ss_pred C-cccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCcchHHHH
Q 024121 168 D-EKLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAG 244 (272)
Q Consensus 168 ~-e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~g~t~~~ 244 (272)
+ ++.++.++++. ++++++.+++++.+.+.+.|++++++.+++.+++.++.+++.+++.+|..|.+.+++|+|+|..+
T Consensus 152 ~~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (263)
T 1yqg_A 152 DDEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQKNVTSKGGTTHEA 231 (263)
T ss_dssp SSTTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTCCTTSHHHHH
T ss_pred CChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCChhHHHH
Confidence 7 88899999987 89999999999999999999999999999999999999888766777999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024121 245 IHELEKSGFRGILMNAVVAAAKRSRELS 272 (272)
Q Consensus 245 l~~l~~~~~~~~~~~~~~~~~~r~~~~~ 272 (272)
++.|++.+++..+.+++.++++|++|++
T Consensus 232 l~~l~~~~~~~~~~~a~~~~~~~~~~~~ 259 (263)
T 1yqg_A 232 VEAFRRHRVAEAISEGVCACVRRSQEME 259 (263)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999863
No 7
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=100.00 E-value=4.2e-32 Score=230.46 Aligned_cols=248 Identities=13% Similarity=0.121 Sum_probs=202.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc--eeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV--KVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~--~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
|||+|||+|+||++++..|.+.|+ +|++| +|++++.+.+.+.|+ ....++.++ .++|+||+|||++.+.+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~ 74 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGH----YLIGV-SRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTL 74 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHH
Confidence 689999999999999999999999 99999 999999988877776 355677787 8999999999999999999
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCc------hhhh----cCC-ceEEEeCCCCCHHHHHHHHH
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNT------PSAV----GEA-ATVMSLGGTATEEDGELIGK 156 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~------~~~~----~~g-~~~~~~~~~~~~~~~~~v~~ 156 (272)
.++.++++++++|+++ ++++...++.... ..+++..||.. |... ..+ .+.++++...+++..+.+++
T Consensus 75 ~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~ 153 (279)
T 2f1k_A 75 EKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRS 153 (279)
T ss_dssp HHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHH
Confidence 9999988889999986 5566544433221 12555555532 2111 123 45666665668899999999
Q ss_pred HhhhcCC-eEEcCcccchhHHHch--HHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Q 024121 157 LFGSVGK-IWRADEKLFDAITGLS--GPAYIFLAIEALADGGVAAGLP--RELALGLASQTVLGAASMVTKSGKHPGQLK 231 (272)
Q Consensus 157 ll~~~G~-~~~~~e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~--~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~ 231 (272)
+|+.+|. .+++++..++.+++++ +|++++. ++.+.+...|++ .+.+..++.+++.++.++.. .+|..|.
T Consensus 154 l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~---al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~---~~p~~~~ 227 (279)
T 2f1k_A 154 VLEPLGVKIYLCTPADHDQAVAWISHLPVMVSA---ALIQACAGEKDGDILKLAQNLASSGFRDTSRVGG---GNPELGT 227 (279)
T ss_dssp HHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHH---HHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTGGG---SCHHHHH
T ss_pred HHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHH---HHHHHHHhcccccchhHHHhhcCCcccchhcccC---CCHHHHH
Confidence 9999995 5778888899998887 5666554 777777788877 78889999999999988864 5899999
Q ss_pred HhcCCCcchHHHHHHHHHh--CCHHHHHH----HHHHHHHHHHhhc
Q 024121 232 DDVASPGGTTIAGIHELEK--SGFRGILM----NAVVAAAKRSREL 271 (272)
Q Consensus 232 ~~~~~~~g~t~~~l~~l~~--~~~~~~~~----~~~~~~~~r~~~~ 271 (272)
+.+++|+|+|+++++.|++ ++|+..+. +++.++++|++|+
T Consensus 228 ~~~~s~~~~~~~~l~~~~~~l~~~~~~i~~~d~~a~~~~~~~~~~~ 273 (279)
T 2f1k_A 228 MMATYNQRALLKSLQDYRQHLDQLITLISNQQWPELHRLLQQTNGD 273 (279)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 9999999999999999999 89999999 9999999999986
No 8
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.97 E-value=3.7e-30 Score=219.69 Aligned_cols=251 Identities=16% Similarity=0.198 Sum_probs=196.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCc--eeecCchhhhccCCEEEEeeCccc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGV--KVLSDNNAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~~g~--~~~~~~~~~~~~aDivil~v~~~~ 83 (272)
|++|||+|||+|+||++++.+|.++ |+ +|++| +|++++.+.+.+.|+ ..+.++.++++++|+||+|||++.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~----~V~~~-d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~ 78 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHY----KIVGY-NRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK 78 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTS----EEEEE-CSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCc----EEEEE-cCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH
Confidence 4678999999999999999999988 56 89999 999999888877776 456677788899999999999999
Q ss_pred HHHHHHHhchh-cCCCCEEEEEcCCCCH---HHHHHHhCC--CCEEEEccC------chhhh----cCCc-eEEEeCCCC
Q 024121 84 VKDVAMQIRPL-LSRKKLLVSVAAGVKL---KDLQEWTGH--SRFIRVMPN------TPSAV----GEAA-TVMSLGGTA 146 (272)
Q Consensus 84 ~~~v~~~l~~~-l~~~~~iis~~~~~~~---~~l~~~~~~--~~~~~~~p~------~~~~~----~~g~-~~~~~~~~~ 146 (272)
+.+++.++.++ ++++++|++++ +++. +.+++.++. .+++..||. .|... ..|. +.+++....
T Consensus 79 ~~~v~~~l~~~~l~~~~ivi~~~-~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~ 157 (290)
T 3b1f_A 79 TIDFIKILADLDLKEDVIITDAG-STKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLT 157 (290)
T ss_dssp HHHHHHHHHTSCCCTTCEEECCC-SCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEECC-CCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCC
Confidence 99999999888 88898888654 4433 566666652 345555554 22211 1343 556666666
Q ss_pred CHHHHHHHHHHhhhcCCe-EEcCcccchhHHHch---HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Q 024121 147 TEEDGELIGKLFGSVGKI-WRADEKLFDAITGLS---GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTK 222 (272)
Q Consensus 147 ~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~ 222 (272)
+++..+.++++|+.+|.. ++++++.++..++.. ++.+.+.+++.+.+ .|++.+.++.+..+++.++.+++
T Consensus 158 ~~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~~~----~g~~~~~~~~la~~~~~~~~rla-- 231 (290)
T 3b1f_A 158 KPNTIPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAGD----FSESHEMTKHFAAGGFRDMTRIA-- 231 (290)
T ss_dssp CTTHHHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HHHHCTHHHHHCCHHHHHTTGGG--
T ss_pred CHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHh----cccchhhHHhhccccHHhhhhhh--
Confidence 788999999999999965 678888888875544 45554455555543 45555678899999999998886
Q ss_pred cCCCHHHHHHhcCCCcchHHHHHHHHHh--CCHHHHHH----HHHHHHHHHHhhc
Q 024121 223 SGKHPGQLKDDVASPGGTTIAGIHELEK--SGFRGILM----NAVVAAAKRSREL 271 (272)
Q Consensus 223 ~~~~~~~l~~~~~~~~g~t~~~l~~l~~--~~~~~~~~----~~~~~~~~r~~~~ 271 (272)
+.+|..|++.+.+|++++.++++.|++ +.++..+. +++.+.++|++++
T Consensus 232 -~~~p~~~~~~~~~n~~~~~~~l~~~~~~l~~~~~~l~~~d~~~l~~~~~~~~~~ 285 (290)
T 3b1f_A 232 -ESEPGMWTSILLTNQEAVLDRIENFKQRLDEVSNLIKARDENAIWAFFNQSRQI 285 (290)
T ss_dssp -GSCHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 358999999999999999999999988 47888887 8888999988864
No 9
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.97 E-value=1.1e-29 Score=216.30 Aligned_cols=237 Identities=16% Similarity=0.242 Sum_probs=187.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
+|||+|||+ |+||++++.+|.+.|+ +|++| +|++++.+.+.+.|+... +..++++++|+||+|||++.+.+++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~----~V~~~-~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~~~~~v~ 84 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAH----HLAAI-EIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDNIIEKVA 84 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSS----EEEEE-CCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCchHHHHHH
Confidence 479999999 9999999999999999 99999 999999888887776654 6677889999999999999999999
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHHHHHHhCCCCEEEEccCchhh--------hcCC-------ceEEEeCCCCCHHHHHH
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSA--------VGEA-------ATVMSLGGTATEEDGEL 153 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~l~~~~~~~~~~~~~p~~~~~--------~~~g-------~~~~~~~~~~~~~~~~~ 153 (272)
.++.+.++++++|+|++++.+.+.+++..++.++++.||+.|.. ...| ...++.+...+++..+.
T Consensus 85 ~~l~~~l~~~~ivv~~s~~~~~~~l~~~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~ 164 (286)
T 3c24_A 85 EDIVPRVRPGTIVLILDAAAPYAGVMPERADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAI 164 (286)
T ss_dssp HHHGGGSCTTCEEEESCSHHHHHTCSCCCTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHH
T ss_pred HHHHHhCCCCCEEEECCCCchhHHHHhhhCCCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHH
Confidence 99998888999999987776655555433346789999987655 5566 34343322357889999
Q ss_pred HHHHhhhcCC----eEEcCcccchhH-HHch---HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCC
Q 024121 154 IGKLFGSVGK----IWRADEKLFDAI-TGLS---GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGK 225 (272)
Q Consensus 154 v~~ll~~~G~----~~~~~e~~~~~~-~~~~---~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~ 225 (272)
++++|+.+|. .+++++++++.+ ++++ ++.|++.++|++.+++.+.|++++++.+++.+++.++..++.+ .
T Consensus 165 v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~--~ 242 (286)
T 3c24_A 165 GADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGHLNVEIAMWFG--Y 242 (286)
T ss_dssp HHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTT--S
T ss_pred HHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh--h
Confidence 9999999997 477898888888 5554 6788888999999888888999999999999999999877654 5
Q ss_pred CHHHHHHhcCCCcchHHHHHHH-HHhCCHHHHHH
Q 024121 226 HPGQLKDDVASPGGTTIAGIHE-LEKSGFRGILM 258 (272)
Q Consensus 226 ~~~~l~~~~~~~~g~t~~~l~~-l~~~~~~~~~~ 258 (272)
+|..|.+....+ ++.++. +++.+++..+.
T Consensus 243 ~p~~~~di~~~~----i~~~~~~l~~~~~~~~~~ 272 (286)
T 3c24_A 243 SPKVPSDAALRL----MEFAKDIVVKEDWREALN 272 (286)
T ss_dssp SCCC---CCSTT----HHHHHHHHBCTTGGGGGC
T ss_pred CCchhHHHHHHH----HHHHHHHHhccCHHHhcC
Confidence 677888777666 444444 55666655444
No 10
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.97 E-value=1.5e-29 Score=217.73 Aligned_cols=250 Identities=18% Similarity=0.232 Sum_probs=197.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc--eeecCchh-hhccCCEEEEeeCcccHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV--KVLSDNNA-VVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~--~~~~~~~~-~~~~aDivil~v~~~~~~~ 86 (272)
.|||+|||+|+||.+|+.+|.++|+ ..+|++| ||++++.+.+.+.|+ ..+.++.+ ++++||+||+|||++.+.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~--~~~V~~~-dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~ 109 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGF--KGKIYGY-DINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFRE 109 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTC--CSEEEEE-CSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCC--CCEEEEE-ECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHH
Confidence 4799999999999999999999997 2379999 999999988888887 45677788 8999999999999999999
Q ss_pred HHHHhchhcCCCCEEEEEcCCCC---HHHHHHHhCCCCEEEEccCchhhh----------cCC-ceEEEeCCCCCHHHHH
Q 024121 87 VAMQIRPLLSRKKLLVSVAAGVK---LKDLQEWTGHSRFIRVMPNTPSAV----------GEA-ATVMSLGGTATEEDGE 152 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~~~~---~~~l~~~~~~~~~~~~~p~~~~~~----------~~g-~~~~~~~~~~~~~~~~ 152 (272)
++.++.++++++++|++++ +++ .+.+++.++. +++..||..+... ..| .+++++++..+++.++
T Consensus 110 vl~~l~~~l~~~~iv~d~~-Svk~~~~~~~~~~l~~-~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~ 187 (314)
T 3ggo_A 110 IAKKLSYILSEDATVTDQG-SVKGKLVYDLENILGK-RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLK 187 (314)
T ss_dssp HHHHHHHHSCTTCEEEECC-SCCTHHHHHHHHHHGG-GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHH
T ss_pred HHHHHhhccCCCcEEEECC-CCcHHHHHHHHHhcCC-CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHH
Confidence 9999999999999988864 444 3456666653 7787777643211 133 4566776677899999
Q ss_pred HHHHHhhhcCC-eEEcCcccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 024121 153 LIGKLFGSVGK-IWRADEKLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQ 229 (272)
Q Consensus 153 ~v~~ll~~~G~-~~~~~e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~ 229 (272)
.++++|+.+|. .+++++++||.+++++ +|++++. ++.....+.+.+.+++.++..++|+++++++. .+|.+
T Consensus 188 ~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a~---~l~~~~~~~~~~~~~~~~~a~~~frd~tRia~---~~p~~ 261 (314)
T 3ggo_A 188 LVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAF---ALVDTLIHMSTPEVDLFKYPGGGFKDFTRIAK---SDPIM 261 (314)
T ss_dssp HHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH---HHHHHHHHHCCSSCCGGGCCTTTTTTHHHHTT---SCHHH
T ss_pred HHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCcchHHHHhhccccHHHHHHHhc---CCHHH
Confidence 99999999996 4789999999999988 7887654 33334445565566677888899999988864 58999
Q ss_pred HHHhcCCCcchHHHHHHHHHhC--CHHHHHH----HHHHHHHHHHhh
Q 024121 230 LKDDVASPGGTTIAGIHELEKS--GFRGILM----NAVVAAAKRSRE 270 (272)
Q Consensus 230 l~~~~~~~~g~t~~~l~~l~~~--~~~~~~~----~~~~~~~~r~~~ 270 (272)
|.+.+.+|.....+.++.+++. .+...+. +.+.+.++++++
T Consensus 262 w~di~~~N~~~~~~~l~~~~~~l~~l~~~l~~~d~~~l~~~~~~a~~ 308 (314)
T 3ggo_A 262 WRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVEYLKEVKI 308 (314)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999988888888888765 5555555 567777777665
No 11
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.96 E-value=1.4e-28 Score=210.11 Aligned_cols=253 Identities=15% Similarity=0.171 Sum_probs=185.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~~v 87 (272)
+|+||||||+|+||.+|+++|+++|| +|++| ||++++.+.+.+.|+..+.++.|+++++|+||+|||++ ++++|
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~----~v~v~-dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V 76 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGY----LLNVF-DLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGL 76 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCC----eEEEE-cCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHH
Confidence 46799999999999999999999999 99999 99999999999999999999999999999999999865 68888
Q ss_pred HHH---hchhcCCCCEEEEEcCCCCHHH---HHHHhC--CCCEEEE-ccCchhhhcCCc-eEEEeCCCCCHHHHHHHHHH
Q 024121 88 AMQ---IRPLLSRKKLLVSVAAGVKLKD---LQEWTG--HSRFIRV-MPNTPSAVGEAA-TVMSLGGTATEEDGELIGKL 157 (272)
Q Consensus 88 ~~~---l~~~l~~~~~iis~~~~~~~~~---l~~~~~--~~~~~~~-~p~~~~~~~~g~-~~~~~~~~~~~~~~~~v~~l 157 (272)
+.. +.+.++++++||+++ +++++. +.+.+. +..++.+ +.+.|.....|. ++++.| +++.+++++++
T Consensus 77 ~~~~~g~~~~~~~g~iiId~s-T~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG---~~~~~~~~~p~ 152 (300)
T 3obb_A 77 YLDDDGLLAHIAPGTLVLECS-TIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGG---DAEALEKARPL 152 (300)
T ss_dssp HHSSSSSTTSCCC-CEEEECS-CCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEES---CHHHHHHHHHH
T ss_pred HhchhhhhhcCCCCCEEEECC-CCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeC---CHHHHHHHHHH
Confidence 854 677788999999874 455543 344442 3344432 112344444554 555555 78999999999
Q ss_pred hhhcCC-eEEcCcccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhc---CCCHHHH
Q 024121 158 FGSVGK-IWRADEKLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLGAASMVTKS---GKHPGQL 230 (272)
Q Consensus 158 l~~~G~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~---~~~~~~l 230 (272)
|+.+|+ .+++++......++++.+.+.+..+.++.| .+++.|+|++.+.+++..+..++..+-... +.....+
T Consensus 153 l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~ 232 (300)
T 3obb_A 153 FEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAP 232 (300)
T ss_dssp HHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSG
T ss_pred HHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhcc
Confidence 999995 588888887888888744444444444444 468999999999999988776665443211 1112345
Q ss_pred HHhcCCCcchHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHhh
Q 024121 231 KDDVASPGGTTIAGIHEL-------EKSGFRGILMNAVVAAAKRSRE 270 (272)
Q Consensus 231 ~~~~~~~~g~t~~~l~~l-------~~~~~~~~~~~~~~~~~~r~~~ 270 (272)
....++|++.....++.+ ++.++...+.+...+.|+++.+
T Consensus 233 ~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~a~~ 279 (300)
T 3obb_A 233 ASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLK 279 (300)
T ss_dssp GGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHh
Confidence 566778888776655443 4457777778888888887765
No 12
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.96 E-value=1.8e-28 Score=208.34 Aligned_cols=250 Identities=16% Similarity=0.225 Sum_probs=191.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce--eecCchhhhc-cCCEEEEeeCcccHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK--VLSDNNAVVE-YSDVVVFSVKPQVVKD 86 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~--~~~~~~~~~~-~aDivil~v~~~~~~~ 86 (272)
+|||+|||+|+||.+++..|.+.|+ ..+|++| +|++++.+.+.+.|+. ...++.++++ ++|+||+|||++...+
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~--~~~V~~~-d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~ 77 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGF--KGKIYGY-DINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFRE 77 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTC--CSEEEEE-CSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHH
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCC--CcEEEEE-eCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHH
Confidence 3689999999999999999999886 2369999 9999998888777764 3557778888 9999999999999999
Q ss_pred HHHHhchhcCCCCEEEEEcCCCC--HHHHHHHhCCCCEEEEccCc------hhhh----cCCc-eEEEeCCCCCHHHHHH
Q 024121 87 VAMQIRPLLSRKKLLVSVAAGVK--LKDLQEWTGHSRFIRVMPNT------PSAV----GEAA-TVMSLGGTATEEDGEL 153 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~~~~--~~~l~~~~~~~~~~~~~p~~------~~~~----~~g~-~~~~~~~~~~~~~~~~ 153 (272)
++.++.++++++++|+++++... .+.+++.++. .++..||.. |... ..+. +++++....+++..+.
T Consensus 78 v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~-~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~ 156 (281)
T 2g5c_A 78 IAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKL 156 (281)
T ss_dssp HHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHH
T ss_pred HHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc-cceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHH
Confidence 99999888888888887644332 2455666652 355444421 1111 2454 5666655668899999
Q ss_pred HHHHhhhcCCe-EEcCcccchhHHHch--HHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 024121 154 IGKLFGSVGKI-WRADEKLFDAITGLS--GPAYI-FLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQ 229 (272)
Q Consensus 154 v~~ll~~~G~~-~~~~e~~~~~~~~~~--~~~~~-~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~ 229 (272)
++++|+.+|.. ++++++.++.+++++ +|+++ +.++++ ....|++.+.+..++.+++.++++++. .+|..
T Consensus 157 v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~r~~~---~~p~~ 229 (281)
T 2g5c_A 157 VKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDT----LIHMSTPEVDLFKYPGGGFKDFTRIAK---SDPIM 229 (281)
T ss_dssp HHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHCBTTBCGGGCCTTTGGGC---CC---SCHHH
T ss_pred HHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcccchHHHHhhccccHHHHhHHhc---CCHHH
Confidence 99999999965 678888889999988 67764 334443 444677777788889999999888864 58999
Q ss_pred HHHhcCCCcchHHHHHHHHHh--CCHHHHHH----HHHHHHHHHHhh
Q 024121 230 LKDDVASPGGTTIAGIHELEK--SGFRGILM----NAVVAAAKRSRE 270 (272)
Q Consensus 230 l~~~~~~~~g~t~~~l~~l~~--~~~~~~~~----~~~~~~~~r~~~ 270 (272)
|.+.+++|+++|+++++.|++ ++++..+. +.+.+.++++++
T Consensus 230 ~~~~~~sn~~~~~~~l~~~~~~l~~~~~~i~~~d~~~l~~~~~~~~~ 276 (281)
T 2g5c_A 230 WRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVEYLKEVKI 276 (281)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999998 68888875 567777777765
No 13
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.96 E-value=9.6e-28 Score=205.41 Aligned_cols=231 Identities=16% Similarity=0.141 Sum_probs=177.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
++||+||| +|+||.+++..|.+.|+ +|++| +|+++. +..++++++|+||+|||++.+.+++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~----~V~~~-~~~~~~-------------~~~~~~~~aDvVilavp~~~~~~vl 82 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY----PISIL-DREDWA-------------VAESILANADVVIVSVPINLTLETI 82 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC----CEEEE-CTTCGG-------------GHHHHHTTCSEEEECSCGGGHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC----eEEEE-ECCccc-------------CHHHHhcCCCEEEEeCCHHHHHHHH
Confidence 46899999 99999999999999999 99999 998652 4567788999999999999999999
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHHHHH---HhCCCCEEEEccCchhh--hcCC-ceEEEeCCCCCHHHHHHHHHHhhhcC
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKDLQE---WTGHSRFIRVMPNTPSA--VGEA-ATVMSLGGTATEEDGELIGKLFGSVG 162 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~l~~---~~~~~~~~~~~p~~~~~--~~~g-~~~~~~~~~~~~~~~~~v~~ll~~~G 162 (272)
.++.++++++++|+++ ++++...++. .++ .+++..||..... ...+ .++++++. +++..+.++++|+.+|
T Consensus 83 ~~l~~~l~~~~iv~~~-~svk~~~~~~~~~~~~-~~~v~~hP~~g~~~~~~~g~~~~l~~~~--~~~~~~~v~~l~~~~G 158 (298)
T 2pv7_A 83 ERLKPYLTENMLLADL-TSVKREPLAKMLEVHT-GAVLGLHPMFGADIASMAKQVVVRCDGR--FPERYEWLLEQIQIWG 158 (298)
T ss_dssp HHHGGGCCTTSEEEEC-CSCCHHHHHHHHHHCS-SEEEEEEECSCTTCSCCTTCEEEEEEEE--CGGGTHHHHHHHHHTT
T ss_pred HHHHhhcCCCcEEEEC-CCCCcHHHHHHHHhcC-CCEEeeCCCCCCCchhhcCCeEEEecCC--CHHHHHHHHHHHHHcC
Confidence 9999988888877765 5666544433 333 4566666532111 1223 34555543 6788899999999999
Q ss_pred Ce-EEcCcccchhHHHch--HHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH----HHHHHHhcCCCHHHHHHhc
Q 024121 163 KI-WRADEKLFDAITGLS--GPAYI-FLAIEALADGGVAAGLPRELALGLASQTVLG----AASMVTKSGKHPGQLKDDV 234 (272)
Q Consensus 163 ~~-~~~~e~~~~~~~~~~--~~~~~-~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g----~~~~~~~~~~~~~~l~~~~ 234 (272)
.. ++++++.++.+++++ +|+|+ +.+++++ .+.|++.+.+.++..++|.+ +.+++ +.+|..|.+.+
T Consensus 159 ~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l----~~~g~~~~~~~~la~~~f~~~~~~~~ria---~~~p~~~~di~ 231 (298)
T 2pv7_A 159 AKIYQTNATEHDHNMTYIQALRHFSTFANGLHL----SKQPINLANLLALSSPIYRLELAMIGRLF---AQDAELYADII 231 (298)
T ss_dssp CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH----TTSSCCHHHHHHTCCHHHHHHHHHHHHHH---TSCHHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcCCCHHHHHhhcCHHHHHHHHHHHHHh---cCCHHHHHHHH
Confidence 65 778988999999988 78775 3344433 35899999999999999999 66665 46899999999
Q ss_pred CCCcchHHHHHHHHHhC--CHHHHHH----HHHHHHHHHHhh
Q 024121 235 ASPGGTTIAGIHELEKS--GFRGILM----NAVVAAAKRSRE 270 (272)
Q Consensus 235 ~~~~g~t~~~l~~l~~~--~~~~~~~----~~~~~~~~r~~~ 270 (272)
.+|+++++ +++.+++. .++..+. +++.+.++++++
T Consensus 232 ~sn~~~~~-~l~~~~~~l~~~~~~l~~~d~~~l~~~~~~a~~ 272 (298)
T 2pv7_A 232 MDKSENLA-VIETLKQTYDEALTFFENNDRQGFIDAFHKVRD 272 (298)
T ss_dssp C----CHH-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHCHHHHH-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999 99999884 7777777 788888888775
No 14
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.96 E-value=2.2e-28 Score=211.86 Aligned_cols=227 Identities=15% Similarity=0.142 Sum_probs=178.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhcc----CCEEEEeeCcccH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEY----SDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~----aDivil~v~~~~~ 84 (272)
..+||+|||+|+||.+|+++|.++|+ +|++| ||++++.+.+.+.|+..+.++.+++++ +|+||+|||++.+
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~----~V~~~-dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~ 81 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANH----SVFGY-NRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAI 81 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHH
Confidence 45789999999999999999999999 99999 999999988888898777787777654 7999999999999
Q ss_pred HHHHHHhchhcCCCCEEEEEcCCCCHH---HHHHHhCCCCEEEEccCchhh----------hcCC-ceEEEeCCCCCHH-
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEWTGHSRFIRVMPNTPSA----------VGEA-ATVMSLGGTATEE- 149 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~~~~~---~l~~~~~~~~~~~~~p~~~~~----------~~~g-~~~~~~~~~~~~~- 149 (272)
.+++.++.++ +++++|+++ ++++.. .+++.+++.+++..||..... ...+ .+++++++..+++
T Consensus 82 ~~vl~~l~~~-~~~~iv~Dv-~Svk~~i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~ 159 (341)
T 3ktd_A 82 DSLLDAVHTH-APNNGFTDV-VSVKTAVYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTD 159 (341)
T ss_dssp HHHHHHHHHH-CTTCCEEEC-CSCSHHHHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCC
T ss_pred HHHHHHHHcc-CCCCEEEEc-CCCChHHHHHHHHhCCCCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhh
Confidence 9999999886 788877765 566654 344433334677667643211 0112 3667766656667
Q ss_pred -------HHHHHHHHhhhcC-CeEEcCcccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 024121 150 -------DGELIGKLFGSVG-KIWRADEKLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASM 219 (272)
Q Consensus 150 -------~~~~v~~ll~~~G-~~~~~~e~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~ 219 (272)
.++.++++|+.+| +++++++++||.+++++ +|++++. ++...... +.+.+..+..++|++.+++
T Consensus 160 ~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~---aL~~~~~~---~~~~~~~laa~gfrd~tRi 233 (341)
T 3ktd_A 160 INSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAE---TLAIVGDN---GGALSLSLAAGSYRDSTRV 233 (341)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH---HHHHHHHH---THHHHHHHCCHHHHHHTGG
T ss_pred hccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHH---HHHHHhhc---chHHHHHHccccHHHHHHH
Confidence 8999999999999 56889999999999988 8888765 33333322 3567888999999999887
Q ss_pred HHhcCCCHHHHHHhcCCCcchHHHHHHHHHhC
Q 024121 220 VTKSGKHPGQLKDDVASPGGTTIAGIHELEKS 251 (272)
Q Consensus 220 ~~~~~~~~~~l~~~~~~~~g~t~~~l~~l~~~ 251 (272)
+. .+|.+|.+.+.+|.+...+.|+.+++.
T Consensus 234 a~---s~p~lw~di~~~N~~~~~~~l~~~~~~ 262 (341)
T 3ktd_A 234 AG---TDPGLVRAMCESNAGPLVKALDEALAI 262 (341)
T ss_dssp GG---SCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hc---CCHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 54 589999999999988888888888665
No 15
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.95 E-value=5.8e-27 Score=200.10 Aligned_cols=247 Identities=13% Similarity=0.193 Sum_probs=174.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHHHHH-
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDVA- 88 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~~v~- 88 (272)
+||||||+|+||.+|+++|.++|| +|++| ||++++.+++.+.|+..+.++.|+++++|+||+|+|++ ++++++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~----~V~v~-dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~ 80 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGY----ELVVW-NRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFS 80 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEC--------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSC
T ss_pred CcEEEEecHHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHH
Confidence 589999999999999999999999 99999 99999999999899999999999999999999999875 456655
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHH---HHHHhC--CCCEEEE-ccCchhhhcCCc-eEEEeCCCCCHHHHHHHHHHhhhc
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKD---LQEWTG--HSRFIRV-MPNTPSAVGEAA-TVMSLGGTATEEDGELIGKLFGSV 161 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~---l~~~~~--~~~~~~~-~p~~~~~~~~g~-~~~~~~~~~~~~~~~~v~~ll~~~ 161 (272)
..+.+.+++++++|+++ +++++. +.+.+. +..++.. ..+.|.....|. ++++.| +++.+++++++|+.+
T Consensus 81 ~~~~~~~~~~~iiid~s-T~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG---~~~~~~~~~~~l~~~ 156 (297)
T 4gbj_A 81 MELVEKLGKDGVHVSMS-TISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSG---NAGAKERIKPIVENF 156 (297)
T ss_dssp HHHHHHHCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEE---CHHHHHHHHHHHHTT
T ss_pred HHHHhhcCCCeEEEECC-CCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeeccc---chhHHHHHHHHHHHh
Confidence 45777788999999874 455543 333332 3344432 112333334454 455544 789999999999999
Q ss_pred CCe-EEcCc-ccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCC
Q 024121 162 GKI-WRADE-KLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVAS 236 (272)
Q Consensus 162 G~~-~~~~e-~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 236 (272)
|+. +++++ ......++++.+.+.+..+.++.| .+++.|+|++++++++..+..++..+-. ....+.+..+.
T Consensus 157 g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~~~----~~~~~~~~~~~ 232 (297)
T 4gbj_A 157 VKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIFQN----YGKLVASNTYE 232 (297)
T ss_dssp CSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHHHH----HHHHHHHTCCC
T ss_pred hCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchhhc----cCccccCCCCC
Confidence 965 77775 467777787744444444444444 4689999999999999887766554322 34566666667
Q ss_pred C-cchHHHHHHH-------HHhCCHHHHHHHHHHHHHHHHhh
Q 024121 237 P-GGTTIAGIHE-------LEKSGFRGILMNAVVAAAKRSRE 270 (272)
Q Consensus 237 ~-~g~t~~~l~~-------l~~~~~~~~~~~~~~~~~~r~~~ 270 (272)
| ++.....++. -++.++.-.+.+.+.+.|+++.+
T Consensus 233 p~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~a~~ 274 (297)
T 4gbj_A 233 PVAFRFPLGLKDINLTLQTASDVNAPMPFADIIRNRFISGLA 274 (297)
T ss_dssp SCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred CccchhHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHh
Confidence 6 4555544443 35568888888888888888765
No 16
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.95 E-value=1.5e-25 Score=192.41 Aligned_cols=256 Identities=16% Similarity=0.173 Sum_probs=182.9
Q ss_pred CCCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc
Q 024121 3 AFPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 3 ~~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~ 82 (272)
++..+..+|||+|||+|.||.+|+++|.++|+ +|++| ||++++.+++.+.|+..+.++.++++++|+||+|||+.
T Consensus 2 ~m~~~~~~~~IgiIG~G~mG~~~A~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~ 76 (306)
T 3l6d_A 2 SLSDESFEFDVSVIGLGAMGTIMAQVLLKQGK----RVAIW-NRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDN 76 (306)
T ss_dssp CCCCCCCSCSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSH
T ss_pred CCCcccCCCeEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCH
Confidence 34555667899999999999999999999999 99999 99999999998889988889999999999999999976
Q ss_pred -cHHHHHH--HhchhcCCCCEEEEEcCCCCH--HHHHHHhC--CCCEEEE--ccCchhhhcCCceEEEeCCCCCHHHHHH
Q 024121 83 -VVKDVAM--QIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRV--MPNTPSAVGEAATVMSLGGTATEEDGEL 153 (272)
Q Consensus 83 -~~~~v~~--~l~~~l~~~~~iis~~~~~~~--~~l~~~~~--~~~~~~~--~p~~~~~~~~g~~~~~~~~~~~~~~~~~ 153 (272)
++++++. .+.+ +.++++||++++..+. ..+.+.+. +.+++.. +...|.....+.++++.+ +++.++.
T Consensus 77 ~~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg---~~~~~~~ 152 (306)
T 3l6d_A 77 HATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTG---DREAFEQ 152 (306)
T ss_dssp HHHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEE---CHHHHHH
T ss_pred HHHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcC---CHHHHHH
Confidence 5888886 5644 4689999987554332 23444332 3455543 112232222344555554 6889999
Q ss_pred HHHHhhhcC-CeEEc--Cc-ccchhHHHchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHhcCCCHH
Q 024121 154 IGKLFGSVG-KIWRA--DE-KLFDAITGLSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVL-GAASMVTKSGKHPG 228 (272)
Q Consensus 154 v~~ll~~~G-~~~~~--~e-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~-g~~~~~~~~~~~~~ 228 (272)
++++|+.+| +.+++ ++ .......+......+..+.|++. .+++.|+|++++.+++..+.. +.+.++.. ...
T Consensus 153 ~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~-la~~~Gld~~~~~~~~~~~~~~~~s~~~~~---~~~ 228 (306)
T 3l6d_A 153 HRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVG-AGDRFGLPVSKTARLLLETSRFFVADALEE---AVR 228 (306)
T ss_dssp HHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHhhhhcccHHHHH---HHH
Confidence 999999996 55778 65 23333333111122334445544 578999999999999998863 44444432 234
Q ss_pred HHHHhcCCCcchHHH--------HHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 229 QLKDDVASPGGTTIA--------GIHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 229 ~l~~~~~~~~g~t~~--------~l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
.+.+..++|++++.. .++..++.|+...+.+++.+.|+++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 279 (306)
T 3l6d_A 229 RLETQDFKGDQARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQRAAAM 279 (306)
T ss_dssp HHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc
Confidence 666677788765432 3556677899999999999999998764
No 17
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.94 E-value=3e-25 Score=191.02 Aligned_cols=251 Identities=14% Similarity=0.170 Sum_probs=181.7
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCc-ccH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~-~~~ 84 (272)
...++|||+|||+|.||.+|+.+|.++|+ +|++| ||++++.+.+.+.|+..+.++.++++++|+||+|||. .++
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~----~V~~~-dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~ 91 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGF----KVTVW-NRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAA 91 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHH
Confidence 34567899999999999999999999999 99999 9999999999989999888999999999999999986 578
Q ss_pred HHHH---HHhchhcCCCCEEEEEcCCCCHH---HHHHHhC--CCCEEEEcc--CchhhhcCCce-EEEeCCCCCHHHHHH
Q 024121 85 KDVA---MQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMP--NTPSAVGEAAT-VMSLGGTATEEDGEL 153 (272)
Q Consensus 85 ~~v~---~~l~~~l~~~~~iis~~~~~~~~---~l~~~~~--~~~~~~~~p--~~~~~~~~g~~-~~~~~~~~~~~~~~~ 153 (272)
++++ +++.+.++++++||+++ +++.. .+.+.+. +..++. +| ..+.....|.. +++++ +++.++.
T Consensus 92 ~~v~~~~~~l~~~l~~g~~vv~~s-t~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~l~i~~gg---~~~~~~~ 166 (310)
T 3doj_A 92 LSVVFDKGGVLEQICEGKGYIDMS-TVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQLIILAAG---DKALFEE 166 (310)
T ss_dssp HHHHHSTTCGGGGCCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEEEEEE---CHHHHHH
T ss_pred HHHHhCchhhhhccCCCCEEEECC-CCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCCeEEEEcC---CHHHHHH
Confidence 8998 78888888999999875 44443 3333332 234443 33 22333334443 44544 6889999
Q ss_pred HHHHhhhcCC-eEEcCcccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 024121 154 IGKLFGSVGK-IWRADEKLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQ 229 (272)
Q Consensus 154 v~~ll~~~G~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~ 229 (272)
++++|+.+|. .+++++......++++.+.+....+..+.| .+++.|++++++.+++..+...+..+ .. ....
T Consensus 167 ~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~-~~---~~~~ 242 (310)
T 3doj_A 167 SIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMF-KG---KGPS 242 (310)
T ss_dssp HHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHHH-HH---HHHH
T ss_pred HHHHHHHhCCCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHH-HH---Hhhh
Confidence 9999999995 477877666666776644443333333333 46799999999999887654333221 11 1334
Q ss_pred HHHhcCCCcchHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHhh
Q 024121 230 LKDDVASPGGTTIAGIHEL-------EKSGFRGILMNAVVAAAKRSRE 270 (272)
Q Consensus 230 l~~~~~~~~g~t~~~l~~l-------~~~~~~~~~~~~~~~~~~r~~~ 270 (272)
+.+..+.|++....+.+.+ ++.|+...+.+++.+.++++.+
T Consensus 243 ~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~ 290 (310)
T 3doj_A 243 MNKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARS 290 (310)
T ss_dssp HHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCCccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 5566667877655555444 6678888899999999888765
No 18
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.94 E-value=3.6e-25 Score=189.94 Aligned_cols=248 Identities=14% Similarity=0.161 Sum_probs=178.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ecCchhhhccCCEEEEeeCcc-cHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LSDNNAVVEYSDVVVFSVKPQ-VVKD 86 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-~~~~~~~~~~aDivil~v~~~-~~~~ 86 (272)
+.|||+|||+|.||.+|+.+|.++|+ +|++| ||++++.+.+.+.|+.. +.++.++++++|+||+|||+. .++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~ 80 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL----STWGA-DLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQ 80 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC----eEEEE-ECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHH
Confidence 45899999999999999999999999 99999 99999999999888876 788899999999999999975 7888
Q ss_pred HH---HHhchhcCCCCEEEEEcCCCCHH---HHHHHhC--CCCEEEEcc--CchhhhcCCc-eEEEeCCCCCHHHHHHHH
Q 024121 87 VA---MQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMP--NTPSAVGEAA-TVMSLGGTATEEDGELIG 155 (272)
Q Consensus 87 v~---~~l~~~l~~~~~iis~~~~~~~~---~l~~~~~--~~~~~~~~p--~~~~~~~~g~-~~~~~~~~~~~~~~~~v~ 155 (272)
++ +++.+.++++++||++++ ++.. .+.+.+. +..++. +| ..|.....|. .+++++ +++.++.++
T Consensus 81 v~~~~~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~ 155 (303)
T 3g0o_A 81 VLFGEDGVAHLMKPGSAVMVSST-ISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTVMASG---SEAAFTRLK 155 (303)
T ss_dssp HHC--CCCGGGSCTTCEEEECSC-CCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEEEEEC---CHHHHHHHH
T ss_pred HHhChhhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEEEeCC---CHHHHHHHH
Confidence 88 778888899999998754 4443 3444333 234444 44 2344445555 444443 688999999
Q ss_pred HHhhhcCCe-EEcCc-ccchhHHHchHHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 024121 156 KLFGSVGKI-WRADE-KLFDAITGLSGPAYIFL----AIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQ 229 (272)
Q Consensus 156 ~ll~~~G~~-~~~~e-~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~ 229 (272)
++|+.+|+. +++++ .......+++.+.+... +.|++. .+++.|++++++.+++..+..++..+ .. ....
T Consensus 156 ~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~-l~~~~G~d~~~~~~~~~~~~~~s~~~-~~---~~~~ 230 (303)
T 3g0o_A 156 PVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMA-LAARAGIPLDVMYDVVTHAAGNSWMF-EN---RMQH 230 (303)
T ss_dssp HHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHTTSTTCCHHH-HH---HHHH
T ss_pred HHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHhcccCCHHH-Hh---hhHH
Confidence 999999954 67776 55556666653333322 333333 56799999999999987754333322 11 1223
Q ss_pred HHHhcCCCcchHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 230 LKDDVASPGGTTIAG-------IHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 230 l~~~~~~~~g~t~~~-------l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
+.+..++|++..... ++..++.|+...+.+++.+.++++.+.
T Consensus 231 ~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 279 (303)
T 3g0o_A 231 VVDGDYTPRSAVDIFVKDLGLVADTAKALRFPLPLASTALNMFTSASNA 279 (303)
T ss_dssp HHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred HhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhc
Confidence 445556777765554 344477799999999999999988763
No 19
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.94 E-value=1.7e-25 Score=190.52 Aligned_cols=248 Identities=15% Similarity=0.164 Sum_probs=181.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHHHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDVA 88 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~~v~ 88 (272)
+|||+|||+|+||.+|+.+|.++|+ +|++| ||++++.+.+.+.|+..+.++.++++++|+||+|||+. ++++++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~ 75 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGF----DVTVW-NRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVC 75 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTC----CEEEE-CSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCC----eEEEE-cCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 3689999999999999999999999 99999 99999999998889998889999999999999999975 789998
Q ss_pred ---HHhchhcCCCCEEEEEcCCCCHH---HHHHHhC--CCCEEEEcc--CchhhhcCCc-eEEEeCCCCCHHHHHHHHHH
Q 024121 89 ---MQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMP--NTPSAVGEAA-TVMSLGGTATEEDGELIGKL 157 (272)
Q Consensus 89 ---~~l~~~l~~~~~iis~~~~~~~~---~l~~~~~--~~~~~~~~p--~~~~~~~~g~-~~~~~~~~~~~~~~~~v~~l 157 (272)
+++.+.++++++||++++ .+.. .+.+.+. +.+++.. | +.|.....|. ++++.+ +++.++.++++
T Consensus 76 ~~~~~l~~~l~~g~~vv~~st-~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~l 150 (287)
T 3pdu_A 76 FGANGVLEGIGGGRGYIDMST-VDDETSTAIGAAVTARGGRFLEA-PVSGTKKPAEDGTLIILAAG---DQSLFTDAGPA 150 (287)
T ss_dssp HSTTCGGGTCCTTCEEEECSC-CCHHHHHHHHHHHHHTTCEEEEC-CEECCHHHHHHTCEEEEEEE---CHHHHHHTHHH
T ss_pred cCchhhhhcccCCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEC-CccCCHHHHhcCCEEEEEeC---CHHHHHHHHHH
Confidence 788888889999998754 4443 3333332 2344432 2 2344444455 444443 68899999999
Q ss_pred hhhcCC-eEEcCcccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHh
Q 024121 158 FGSVGK-IWRADEKLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDD 233 (272)
Q Consensus 158 l~~~G~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 233 (272)
|+.+|+ .+++++.......+++.+.+....+..+.| .+++.|++++++.+++..+...+. +... ....+.+.
T Consensus 151 l~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~-~~~~---~~~~~~~~ 226 (287)
T 3pdu_A 151 FAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANP-MFKG---KGQMLLSG 226 (287)
T ss_dssp HHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCH-HHHH---HHHHHHHT
T ss_pred HHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccCh-HHHh---hccccccC
Confidence 999996 477877666666666644444443334433 467999999999999887653333 2221 12345566
Q ss_pred cCCCcchHHHHHHH-------HHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 234 VASPGGTTIAGIHE-------LEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 234 ~~~~~g~t~~~l~~-------l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
.+.|++....+.+. .++.|+...+.+++.+.++++.+.
T Consensus 227 ~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 271 (287)
T 3pdu_A 227 EFPTSFPLKHMQKDLRLAVELGDRLGQPLHGAATANESFKRARAA 271 (287)
T ss_dssp CCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhc
Confidence 66788766554443 366688888999999999988763
No 20
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.94 E-value=4e-26 Score=195.03 Aligned_cols=249 Identities=16% Similarity=0.183 Sum_probs=185.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~~v 87 (272)
++|||+|||+|.||+.++..|.+.|+ +|++| + ++++.+.+.+.|+....++.++++++|+||+|||.. +++.+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v 75 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAGH----QLHVT-T-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDV 75 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTTC----EEEEC-C-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCC----EEEEE-c-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHH
Confidence 45899999999999999999999999 99999 9 888888888778877778888889999999999765 48888
Q ss_pred HH---HhchhcCCCCEEEEEcCCCC--HHHHHHHhCC--CCEEEEccC--chhhhcCCc-eEEEeCCCCCHHHHHHHHHH
Q 024121 88 AM---QIRPLLSRKKLLVSVAAGVK--LKDLQEWTGH--SRFIRVMPN--TPSAVGEAA-TVMSLGGTATEEDGELIGKL 157 (272)
Q Consensus 88 ~~---~l~~~l~~~~~iis~~~~~~--~~~l~~~~~~--~~~~~~~p~--~~~~~~~g~-~~~~~~~~~~~~~~~~v~~l 157 (272)
+. ++.+.++++++||+++++.+ .+.+.+.++. .+++.. |. .|.....|. .+++.+ +++..+.++++
T Consensus 76 ~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g~~~~~~~~---~~~~~~~~~~l 151 (295)
T 1yb4_A 76 LFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDA-PVSGGEIGAREGTLSIMVGG---EQKVFDRVKPL 151 (295)
T ss_dssp HHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEES---CHHHHHHHHHH
T ss_pred HhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcCCeEEEECC---CHHHHHHHHHH
Confidence 87 78788889999998877642 3455555542 222221 21 122222344 344443 68889999999
Q ss_pred hhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHh
Q 024121 158 FGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDD 233 (272)
Q Consensus 158 l~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 233 (272)
|+.+|.. ++.++.......++..+.+...+...+.|. +++.|++++++.+++..+..++..+.. .+..+.++
T Consensus 152 l~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~----~~~~~~~~ 227 (295)
T 1yb4_A 152 FDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEV----HGERMINR 227 (295)
T ss_dssp HHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHHHH----HHHHHHTT
T ss_pred HHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHH----hhHHHhcC
Confidence 9999964 667776666666665444444444455554 789999999998888776654433321 35567777
Q ss_pred cCCCcchHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 234 VASPGGTTIA-------GIHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 234 ~~~~~g~t~~-------~l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
.++|++.++. .++..++.|+...+.+++.+.++|+.+.
T Consensus 228 ~~~~g~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~ 272 (295)
T 1yb4_A 228 TFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAAN 272 (295)
T ss_dssp CCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHc
Confidence 8889998887 7888899999999999999999999875
No 21
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.94 E-value=4.2e-25 Score=190.61 Aligned_cols=252 Identities=18% Similarity=0.187 Sum_probs=185.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC-cccHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~-~~~~~ 85 (272)
++..|||+|||+|.||++++..|.+.|+ +|++| +|++++.+.+.+.|+....++.++++++|+||+||| +.+++
T Consensus 27 ~~~~~~I~iIG~G~mG~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~ 101 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMGSGIVSNLLKMGH----TVTVW-NRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAK 101 (316)
T ss_dssp CCCSSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHH
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHH
Confidence 3345899999999999999999999999 99999 999999988888888887788888899999999999 78899
Q ss_pred HHHHHh---chhcCCCCEEEEEcCCCC--HHHHHHHhC--CCCEEEE-ccCchhhhcCCceEEE-eCCCCCHHHHHHHHH
Q 024121 86 DVAMQI---RPLLSRKKLLVSVAAGVK--LKDLQEWTG--HSRFIRV-MPNTPSAVGEAATVMS-LGGTATEEDGELIGK 156 (272)
Q Consensus 86 ~v~~~l---~~~l~~~~~iis~~~~~~--~~~l~~~~~--~~~~~~~-~p~~~~~~~~g~~~~~-~~~~~~~~~~~~v~~ 156 (272)
+++.++ .+.+.++++||+++++.+ .+.+.+.++ +..++.. +++.+...+.+...++ ++ +++..+.+++
T Consensus 102 ~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g---~~~~~~~v~~ 178 (316)
T 2uyy_A 102 DLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAG---DRGLYEDCSS 178 (316)
T ss_dssp HHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEE---CHHHHHHTHH
T ss_pred HHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCC---CHHHHHHHHH
Confidence 988764 367788999998866432 234555543 3345542 3444555556654444 43 5788899999
Q ss_pred HhhhcCCe-EEcCcccchhHHHch----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Q 024121 157 LFGSVGKI-WRADEKLFDAITGLS----GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLK 231 (272)
Q Consensus 157 ll~~~G~~-~~~~e~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~ 231 (272)
+|+.+|.. ++.++.......++. ...+...+.|++.. +++.|++++++.+++..+..++..+... .+..+.
T Consensus 179 ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~l-a~~~G~~~~~~~~~~~~~~~~s~~~~~~---~~~~l~ 254 (316)
T 2uyy_A 179 CFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTL-AQVTGQSQQTLLDILNQGQLASIFLDQK---CQNILQ 254 (316)
T ss_dssp HHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHHSTTCCHHHHHH---HHHHHH
T ss_pred HHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHcCCCCCHHHHHh---hHHhhc
Confidence 99999965 666654433333333 22344556666663 7899999999999888776555444321 344555
Q ss_pred HhcCCCcchHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 232 DDVASPGGTTIA-------GIHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 232 ~~~~~~~g~t~~-------~l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
++ ++|++.++. .++..++.|+...+.+++.+.++++.+.
T Consensus 255 ~~-~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~ 300 (316)
T 2uyy_A 255 GN-FKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKAL 300 (316)
T ss_dssp TC-CCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred CC-CCCCCcHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhc
Confidence 44 678887776 5566788899999999999999999875
No 22
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.93 E-value=3.8e-25 Score=189.36 Aligned_cols=250 Identities=18% Similarity=0.227 Sum_probs=183.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC-cccHHHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDVA 88 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~-~~~~~~v~ 88 (272)
.|||+|||+|.||..++..|.+.|+ +|++| +|++++.+.+.+.|+....++.++++++|+||+|+| +.+++.++
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~ 79 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAGY----SLVVS-DRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVA 79 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cceEEEECchHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 3799999999999999999999999 99999 999999998888888888888888899999999998 56788888
Q ss_pred ---HHhchhcCCCCEEEEEcCCCC--HHHHHHHhC--CCCEEEE--ccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhh
Q 024121 89 ---MQIRPLLSRKKLLVSVAAGVK--LKDLQEWTG--HSRFIRV--MPNTPSAVGEAATVMSLGGTATEEDGELIGKLFG 159 (272)
Q Consensus 89 ---~~l~~~l~~~~~iis~~~~~~--~~~l~~~~~--~~~~~~~--~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~ 159 (272)
+++.+.++++++||+++++.+ .+.+.+.++ +..++.. +++.+.....+.++++.+ +++..+.++++|+
T Consensus 80 ~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~ 156 (299)
T 1vpd_A 80 LGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGG---DKAIFDKYYDLMK 156 (299)
T ss_dssp HSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHH
T ss_pred hCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCC---CHHHHHHHHHHHH
Confidence 678788889999999877654 246666554 2344432 333444444445555554 6888999999999
Q ss_pred hcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcC
Q 024121 160 SVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVA 235 (272)
Q Consensus 160 ~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 235 (272)
.+|.. ++.++.......++..+.+.+.+...+.|+ +++.|++++++.+++..+..++..+.. ..+.++.+. +
T Consensus 157 ~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~---~~~~~l~~~-~ 232 (299)
T 1vpd_A 157 AMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDA---KAPMVMDRN-F 232 (299)
T ss_dssp TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHH---HHHHHHTTC-C
T ss_pred HHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHH---hhhHhhcCC-C
Confidence 99954 666776667777766455555555555554 789999999999888876654433321 134444444 4
Q ss_pred CCcchHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 236 SPGGTTIAG-------IHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 236 ~~~g~t~~~-------l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
+|++..... ++..++.|+...+.+++.+.++++.+.
T Consensus 233 ~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~ 275 (299)
T 1vpd_A 233 KPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRAD 275 (299)
T ss_dssp CCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhc
Confidence 676654432 334566788889999999999988764
No 23
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.93 E-value=9.6e-25 Score=185.90 Aligned_cols=247 Identities=17% Similarity=0.191 Sum_probs=179.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC-cccHHHHH-
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDVA- 88 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~-~~~~~~v~- 88 (272)
|||+|||+|.||.+|+.+|.++|+ +|++| ||++++.+.+.+.|+..+.++.++++++|+||+||| +.++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 76 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC----SVTIW-NRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCF 76 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC----eEEEE-cCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHc
Confidence 799999999999999999999999 99999 999999999998999988899999999999999999 56899999
Q ss_pred --HHhchhcCCCCEEEEEcCCCCHHH---HHHHhC--CCCEEEEccC--chhhhcCCc-eEEEeCCCCCHHHHHHHHHHh
Q 024121 89 --MQIRPLLSRKKLLVSVAAGVKLKD---LQEWTG--HSRFIRVMPN--TPSAVGEAA-TVMSLGGTATEEDGELIGKLF 158 (272)
Q Consensus 89 --~~l~~~l~~~~~iis~~~~~~~~~---l~~~~~--~~~~~~~~p~--~~~~~~~g~-~~~~~~~~~~~~~~~~v~~ll 158 (272)
+++.+.++++++||++ ++++... +.+.+. +..++. +|. .|.....+. .+++.+ +++.++.++++|
T Consensus 77 ~~~~l~~~l~~~~~vi~~-st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll 151 (287)
T 3pef_A 77 GKHGVLEGIGEGRGYVDM-STVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLIILAAG---DRNLYDEAMPGF 151 (287)
T ss_dssp STTCHHHHCCTTCEEEEC-SCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEEEEEE---CHHHHHHHHHHH
T ss_pred CcchHhhcCCCCCEEEeC-CCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEEEEeC---CHHHHHHHHHHH
Confidence 7888888899999987 4555443 333332 234443 332 233233444 444444 688999999999
Q ss_pred hhcCC-eEEcCcccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhc
Q 024121 159 GSVGK-IWRADEKLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDV 234 (272)
Q Consensus 159 ~~~G~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 234 (272)
+.+|. .+++++.......+++.+.+....+..+.| .+++.|++++++.+++..+...+..+ .. ....+.+..
T Consensus 152 ~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~~~-~~---~~~~~~~~~ 227 (287)
T 3pef_A 152 EKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMF-AL---KGGLIRDRN 227 (287)
T ss_dssp HHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHH-HH---HHHHHHTTC
T ss_pred HHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHH-HH---HhhhhhcCC
Confidence 99995 577887777777777633333332333333 46799999999999988754333222 21 133455566
Q ss_pred CCCcchHHHHHHH-------HHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 235 ASPGGTTIAGIHE-------LEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 235 ~~~~g~t~~~l~~-------l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
+.|++......+. -++.|+...+.+++.+.++++.+.
T Consensus 228 ~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~ 271 (287)
T 3pef_A 228 FAPAFPLKHMQKDLRLAVALGDRVGQPLVASAAANELFKGARAA 271 (287)
T ss_dssp CCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHc
Confidence 6787765544443 355588888888888888887653
No 24
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.93 E-value=6.1e-25 Score=194.18 Aligned_cols=218 Identities=17% Similarity=0.178 Sum_probs=169.8
Q ss_pred CCC-CeEEEEcccHHHHHHHHHHHhC------CCCCCCcEEEEeCCC-HHHHHHHHHcCcee----ecCchhhhccCCEE
Q 024121 8 AES-FILGFIGAGKMAESIAKGVAKS------GVLPPDRICTAVHSN-LKRRDAFESIGVKV----LSDNNAVVEYSDVV 75 (272)
Q Consensus 8 ~~~-~~IgiIG~G~mG~~la~~l~~~------g~~~~~~V~v~~~r~-~~~~~~l~~~g~~~----~~~~~~~~~~aDiv 75 (272)
.+. +||+|||+|+||.+++++|.++ |+ +|.++ .|+ ....+...+.|+.. ..++.+++++||+|
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~----~ViVg-~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVV 125 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKIG-LRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLV 125 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCC----EEEEE-ECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEE
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCC----EEEEE-eCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEE
Confidence 345 8999999999999999999999 98 88877 554 34445555678765 35788999999999
Q ss_pred EEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHH---HhC-CCCEEEEccCchhhh-------c-----CCce-
Q 024121 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQE---WTG-HSRFIRVMPNTPSAV-------G-----EAAT- 138 (272)
Q Consensus 76 il~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~---~~~-~~~~~~~~p~~~~~~-------~-----~g~~- 138 (272)
|++||++...+++.++.++++++++ ++.+.|+++..+++ .++ +.+++++||+.|... + .|.+
T Consensus 126 ILaVP~~~~~eVl~eI~p~LK~GaI-Ls~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~ 204 (525)
T 3fr7_A 126 LLLISDAAQADNYEKIFSHMKPNSI-LGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINS 204 (525)
T ss_dssp EECSCHHHHHHHHHHHHHHSCTTCE-EEESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCE
T ss_pred EECCChHHHHHHHHHHHHhcCCCCe-EEEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccCCccE
Confidence 9999999888899999999999987 57889999888775 344 578999999999886 4 6777
Q ss_pred EEEeCCCCCHHHHHHHHHHhhhcCCeEE--c---Cc---ccchhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 024121 139 VMSLGGTATEEDGELIGKLFGSVGKIWR--A---DE---KLFDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGL 208 (272)
Q Consensus 139 ~~~~~~~~~~~~~~~v~~ll~~~G~~~~--~---~e---~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~ 208 (272)
.++...+.+.+..+.+..++..+|.... . .| +.++..+.++ +|+| ++++.+.+.+.|++++.|+..
T Consensus 205 liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqtvLsG~~pAl----ieA~~d~lVe~G~~pe~Ay~~ 280 (525)
T 3fr7_A 205 SFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGI----VEALFRRYTEQGMDEEMAYKN 280 (525)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHTTTTHHHHHH----HHHHHHHHHHTTCCHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHhhhcCcHHHH----HHHHHHHHHHcCCCHHHHHHH
Confidence 5555556677899999999999996422 1 12 2455556666 5554 477888888999999999999
Q ss_pred HHHHHH-HHHHHHHhcCCCHHHHHHhcCCC
Q 024121 209 ASQTVL-GAASMVTKSGKHPGQLKDDVASP 237 (272)
Q Consensus 209 ~~~~~~-g~~~~~~~~~~~~~~l~~~~~~~ 237 (272)
..+.+. +..+++.+.|. ..+.+.++.+
T Consensus 281 ~~qel~~~i~~li~e~G~--~~m~~~~S~t 308 (525)
T 3fr7_A 281 TVEGITGIISKTISKKGM--LEVYNSLTEE 308 (525)
T ss_dssp HHHHHHTHHHHHHHHHCH--HHHHHTSCHH
T ss_pred HHHHHHHHHHHHHHHhHH--HHHHHHcCcH
Confidence 999988 88888877553 3455555443
No 25
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.93 E-value=1.9e-25 Score=190.27 Aligned_cols=246 Identities=15% Similarity=0.120 Sum_probs=180.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHHHHHH
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDVAM 89 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~~v~~ 89 (272)
|||+|||+|.||..++..|.+ |+ +|++| +|++++.+.+.+.|+.... +.++++++|+||+|||+. +++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~----~V~~~-~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~ 74 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF----PTLVW-NRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVAE 74 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS----CEEEE-CSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC----eEEEE-eCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHHH
Confidence 689999999999999999999 99 99999 9999998888777776655 778888999999999976 4888998
Q ss_pred HhchhcCCCCEEEEEcCCCC--HHHHHHHhC--CCCEEEEccC--chhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCC
Q 024121 90 QIRPLLSRKKLLVSVAAGVK--LKDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGK 163 (272)
Q Consensus 90 ~l~~~l~~~~~iis~~~~~~--~~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~ 163 (272)
++.+.++++++|++++++.+ .+.+.+.++ +..+++. |. .+.....|...++.+ .+++..+.++++| .+|.
T Consensus 75 ~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~ll-~~g~ 150 (289)
T 2cvz_A 75 ALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLG--GPEEAVERVRPFL-AYAK 150 (289)
T ss_dssp HHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEE--SCHHHHHHHGGGC-TTEE
T ss_pred HHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEEC--CCHHHHHHHHHHH-hhcC
Confidence 88888888999998755432 245555554 2345554 53 233334455333333 2688899999999 9996
Q ss_pred -eEEcCcccchhHHHchHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHHHhcCCCc
Q 024121 164 -IWRADEKLFDAITGLSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHP-GQLKDDVASPG 238 (272)
Q Consensus 164 -~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~-~~l~~~~~~~~ 238 (272)
.+++++.......+++.+.+...+...+.|. +.+.|++++++.+++..+..++ .++.. ..+ ..+.+++ +|+
T Consensus 151 ~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s-~~~~~--~~~~~~l~~~~-~~g 226 (289)
T 2cvz_A 151 KVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRS-NATEN--LIPQRVLTRAF-PKT 226 (289)
T ss_dssp EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCB-HHHHH--THHHHTTTSCC-CCS
T ss_pred CeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCC-HHHHH--hccchhhcCCC-CCC
Confidence 4666665555555555566655556666665 7899999999988887766544 33322 123 3444444 788
Q ss_pred chHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 239 GTTIA-------GIHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 239 g~t~~-------~l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
+.++. .++..++.|++..+.+++.+.++|+.++
T Consensus 227 ~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~ 266 (289)
T 2cvz_A 227 FALGLLVKDLGIAMGVLDGEKAPSPLLRLAREVYEMAKRE 266 (289)
T ss_dssp SBHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHc
Confidence 77763 4566788899999999999999999874
No 26
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.93 E-value=2.2e-24 Score=184.95 Aligned_cols=252 Identities=16% Similarity=0.158 Sum_probs=181.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC-cccHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~-~~~~~~v 87 (272)
++|||+|||+|+||.+|+.+|.++|+ +|++| +|++++.+.+.+.|+..+.++.++++++|+||+||| +.+++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v 76 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGY----LLNVF-DLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGL 76 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCC----eEEEE-cCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHH
Confidence 46899999999999999999999999 99999 999999999998999988899999999999999997 5578999
Q ss_pred HH---HhchhcCCCCEEEEEcCCCCH--HHHHHHhC--CCCEEEEccCch--hhhcCCc-eEEEeCCCCCHHHHHHHHHH
Q 024121 88 AM---QIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPNTP--SAVGEAA-TVMSLGGTATEEDGELIGKL 157 (272)
Q Consensus 88 ~~---~l~~~l~~~~~iis~~~~~~~--~~l~~~~~--~~~~~~~~p~~~--~~~~~g~-~~~~~~~~~~~~~~~~v~~l 157 (272)
+. ++.+.++++++||++++..+. +.+.+.++ +.+++.. |..+ .....+. +.+..+ +++.++.++++
T Consensus 77 ~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~-pv~~~~~~~~~g~l~~~~~g---~~~~~~~~~~l 152 (302)
T 2h78_A 77 YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA-PVSGGTAGAAAGTLTFMVGG---DAEALEKARPL 152 (302)
T ss_dssp HHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC-CEESCHHHHHHTCEEEEEES---CHHHHHHHHHH
T ss_pred HcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE-EccCChhhHhcCCceEEeCC---CHHHHHHHHHH
Confidence 98 888888899999987544332 23555443 3456653 5332 2222343 344443 78999999999
Q ss_pred hhhcCC-eEEcCcccchhHHHchHHHHHH----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCC----HH
Q 024121 158 FGSVGK-IWRADEKLFDAITGLSGPAYIF----LAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKH----PG 228 (272)
Q Consensus 158 l~~~G~-~~~~~e~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~----~~ 228 (272)
|+.+|. .+++++...+..++++.+.+.. .+.|++. .+++.|++++++.+++..+...+..+ ...... ..
T Consensus 153 l~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~-l~~~~G~~~~~~~~~~~~~~~~s~~~-~~~~~~~g~~~~ 230 (302)
T 2h78_A 153 FEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMA-LGVANGLEAKVLAEIMRRSSGGNWAL-EVYNPWPGVMEN 230 (302)
T ss_dssp HHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHHTSTTCCHHH-HHCCCSTTTSTT
T ss_pred HHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHcCCCCCHHH-HHhCCCcccccc
Confidence 999995 4777777777777776443333 3334333 46899999999999988765444332 221111 11
Q ss_pred HHHHhcCCCcchHHHHH-------HHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 229 QLKDDVASPGGTTIAGI-------HELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 229 ~l~~~~~~~~g~t~~~l-------~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
.+.+..+.|++...... +..++.|+...+.+++.+.++++.+.
T Consensus 231 ~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 280 (302)
T 2h78_A 231 APASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQ 280 (302)
T ss_dssp SGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhc
Confidence 45555667877655443 33456688888889999999887653
No 27
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.93 E-value=3.1e-25 Score=190.12 Aligned_cols=250 Identities=16% Similarity=0.186 Sum_probs=181.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC-cccHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~-~~~~~~v 87 (272)
+.|||+|||+|.||..++..|.+.|+ +|++| +|++++.+.+.+.|+....++.++++++|+||+|+| +.+++.+
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v 77 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGV----TVYAF-DLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETV 77 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHH
Confidence 45899999999999999999999999 99999 999999988888888887888888899999999996 5568888
Q ss_pred HH---HhchhcCCCCEEEEEcCCC--CHHHHHHHhC--CCCEEEEccCch--hhhcCCc-eEEEeCCCCCHHHHHHHHHH
Q 024121 88 AM---QIRPLLSRKKLLVSVAAGV--KLKDLQEWTG--HSRFIRVMPNTP--SAVGEAA-TVMSLGGTATEEDGELIGKL 157 (272)
Q Consensus 88 ~~---~l~~~l~~~~~iis~~~~~--~~~~l~~~~~--~~~~~~~~p~~~--~~~~~g~-~~~~~~~~~~~~~~~~v~~l 157 (272)
+. ++.+.++++++||+++++. +.+.+.+.++ +.+++. .|..+ .....|. ++++.+ +++..+.++++
T Consensus 78 ~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~-~p~~~~~~~a~~g~~~~~~~g---~~~~~~~v~~l 153 (301)
T 3cky_A 78 MNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD-APVSGGTKGAEAGTLTIMVGA---SEAVFEKIQPV 153 (301)
T ss_dssp HHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE-CCEESHHHHHHHTCEEEEEES---CHHHHHHHHHH
T ss_pred HcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE-ccCCCCHHHHHcCCeEEEECC---CHHHHHHHHHH
Confidence 85 7778888999999988776 3456666554 234443 23211 1122354 445544 68889999999
Q ss_pred hhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHHH
Q 024121 158 FGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLGAASMVTKSGKHP-GQLKD 232 (272)
Q Consensus 158 l~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~-~~l~~ 232 (272)
|+.+|.. ++.++.......++..+.+...+...+.| .+++.|++++++.+++..++.++..+... .+ ..+.+
T Consensus 154 l~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~ 230 (301)
T 3cky_A 154 LSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAK---MEKFIMSG 230 (301)
T ss_dssp HHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHH---CCCCCCTC
T ss_pred HHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHh---hhhhhhcC
Confidence 9999965 66676666666666533333323333333 37899999999999888776665544332 22 23334
Q ss_pred hcCCCcchHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 233 DVASPGGTTIAG-------IHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 233 ~~~~~~g~t~~~-------l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
++ +|++.++.. ++..++.|+...+.+++.+.++++.+.
T Consensus 231 ~~-~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~ 275 (301)
T 3cky_A 231 DF-AGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQIFEGGRAM 275 (301)
T ss_dssp CC-SSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHT
T ss_pred CC-CCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhc
Confidence 34 677766533 456677899999999999999998875
No 28
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.93 E-value=3.2e-24 Score=185.33 Aligned_cols=247 Identities=15% Similarity=0.197 Sum_probs=178.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCc-ccHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~-~~~~~v 87 (272)
++|||+|||+|.||.+|+.+|.+.|+ +|++| ||++++.+++.+.|+..+.++.++++++|+||+|||+ .+++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~----~V~~~-dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v 104 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY----ALQVW-NRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDV 104 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC----eEEEE-cCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHH
Confidence 46799999999999999999999999 99999 9999999999888999888999999999999999995 578888
Q ss_pred HH--HhchhcCCCCEEEEEcCCCCHH---HHHHHhC--CCCEEEEccC--chhhhcCCc-eEEEeCCCCCHHHHHHHHHH
Q 024121 88 AM--QIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMPN--TPSAVGEAA-TVMSLGGTATEEDGELIGKL 157 (272)
Q Consensus 88 ~~--~l~~~l~~~~~iis~~~~~~~~---~l~~~~~--~~~~~~~~p~--~~~~~~~g~-~~~~~~~~~~~~~~~~v~~l 157 (272)
+. ++.+.++++++||++++ .+.. .+.+.+. +..++.. |. .+.....|. .+++.+ +++.++.++++
T Consensus 105 ~~~~~~~~~l~~~~~vi~~st-~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a~~g~l~i~~gg---~~~~~~~~~~l 179 (320)
T 4dll_A 105 LFAQGVAAAMKPGSLFLDMAS-ITPREARDHAARLGALGIAHLDT-PVSGGTVGAEQGTLVIMAGG---KPADFERSLPL 179 (320)
T ss_dssp HTTTCHHHHCCTTCEEEECSC-CCHHHHHHHHHHHHHTTCEEEEC-CEECHHHHHHHTCEEEEEES---CHHHHHHHHHH
T ss_pred HcchhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHcCCEEEeC-CCcCCHhHHhcCCeeEEeCC---CHHHHHHHHHH
Confidence 87 78888889999998754 4443 3333332 2344432 22 222223444 444544 68899999999
Q ss_pred hhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHh
Q 024121 158 FGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDD 233 (272)
Q Consensus 158 l~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 233 (272)
|+.+ .. +++++......++++.+.+....+..+.| .+++.|++++++.+++..+...+..+ . .....+.+.
T Consensus 180 l~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~-~---~~~~~~l~~ 254 (320)
T 4dll_A 180 LKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSRVL-Q---LHGQRMVER 254 (320)
T ss_dssp HHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBHHH-H---THHHHHHTT
T ss_pred HHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCHHH-H---HhhhhhccC
Confidence 9999 54 67777666666666644444333333333 46799999999999887665333222 2 123345555
Q ss_pred cCCCcchHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHhh
Q 024121 234 VASPGGTTIAGIHEL-------EKSGFRGILMNAVVAAAKRSRE 270 (272)
Q Consensus 234 ~~~~~g~t~~~l~~l-------~~~~~~~~~~~~~~~~~~r~~~ 270 (272)
.++|++......+.+ ++.|+...+.+++.+.++++.+
T Consensus 255 ~~~~gf~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~ 298 (320)
T 4dll_A 255 DFAPRARLSIQLKDMRNALATAQEIGFDAPITGLFEQLYAEGVE 298 (320)
T ss_dssp CCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHh
Confidence 667887665444443 6668888899999999988765
No 29
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.93 E-value=1.7e-24 Score=188.17 Aligned_cols=217 Identities=21% Similarity=0.220 Sum_probs=163.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH-HHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKR-RDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v 87 (272)
+.|+|+|||+|+||.+++.+|.+.|+ +|.+| +|++++ .+.+.+.|+.+. +..++++++|+||+|||++...++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~G~----~V~~~-~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~~~~v 88 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDSGV----DVTVG-LRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEFQGRL 88 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHHHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHHCcC----EEEEE-ECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHHHHHH
Confidence 45799999999999999999999998 99999 998765 455555788766 778889999999999999999999
Q ss_pred HH-HhchhcCCCCEEEEEcCCCCHHHHHHHh-C-CCCEEEEccCchhh-------hcCCceE-EEeCCCCCHHHHHHHHH
Q 024121 88 AM-QIRPLLSRKKLLVSVAAGVKLKDLQEWT-G-HSRFIRVMPNTPSA-------VGEAATV-MSLGGTATEEDGELIGK 156 (272)
Q Consensus 88 ~~-~l~~~l~~~~~iis~~~~~~~~~l~~~~-~-~~~~~~~~p~~~~~-------~~~g~~~-~~~~~~~~~~~~~~v~~ 156 (272)
+. ++.++++++++|+++ +|++. .+.... + +..+++.||+.|.. .+.|... +++....+++..+.++.
T Consensus 89 ~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~ 166 (338)
T 1np3_A 89 YKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALS 166 (338)
T ss_dssp HHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHH
T ss_pred HHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHH
Confidence 98 999989999999875 66554 333333 2 24588999987754 3446554 46555557788899999
Q ss_pred HhhhcCC----eEEcCccc---chhHH---Hch--HHHHHHHHHHHHHHHHHHcCCCHHHH-------HHHHHHH-HHHH
Q 024121 157 LFGSVGK----IWRADEKL---FDAIT---GLS--GPAYIFLAIEALADGGVAAGLPRELA-------LGLASQT-VLGA 216 (272)
Q Consensus 157 ll~~~G~----~~~~~e~~---~~~~~---~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a-------~~~~~~~-~~g~ 216 (272)
+++.+|. .++++... .+.++ .++ +|++++..++. +.+.|++++.+ .+++.++ ..|.
T Consensus 167 l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~----l~~~Gl~~~~a~~e~~~~~~~~~~~~~~gg 242 (338)
T 1np3_A 167 YACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFET----LVEAGYAPEMAYFECLHELKLIVDLMYEGG 242 (338)
T ss_dssp HHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHH----HHHTTCCHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred HHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHH----HHHcCCCHHHHHHHhhhHHHHHHHHHHhcC
Confidence 9999996 55565433 33443 334 57776655544 44689999988 6677777 4555
Q ss_pred -HHHHHhcCCCHHHHHHhcCCCc
Q 024121 217 -ASMVTKSGKHPGQLKDDVASPG 238 (272)
Q Consensus 217 -~~~~~~~~~~~~~l~~~~~~~~ 238 (272)
..+ +..+.+|.+|.+.+++|+
T Consensus 243 ~~~~-r~a~s~p~~~~d~~~~~~ 264 (338)
T 1np3_A 243 IANM-NYSISNNAEYGEYVTGPE 264 (338)
T ss_dssp HHHH-HHHSCHHHHHHHHHHHHH
T ss_pred HHHH-HHhcCCHHHHhhhhcCCc
Confidence 444 556778999999998886
No 30
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.92 E-value=9.3e-25 Score=184.94 Aligned_cols=220 Identities=15% Similarity=0.125 Sum_probs=151.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V-~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~~v 87 (272)
+|||+|||+|+||.+|++.|.++ + +| .+| +|++++.+++.+ .|. .+.++.++++++|+||+|||++.+.++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~----~v~~v~-~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~~~~v 74 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-Y----EIGYIL-SRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRYIKTV 74 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC---------CCCEE-CSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTTHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-C----cEEEEE-eCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHHHHHH
Confidence 47899999999999999999988 8 88 599 999999888875 576 666777888899999999999999999
Q ss_pred HHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhc--CCceEEEeCCCCCHHHHHHHHHHhhhcC-C
Q 024121 88 AMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVG--EAATVMSLGGTATEEDGELIGKLFGSVG-K 163 (272)
Q Consensus 88 ~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~--~g~~~~~~~~~~~~~~~~~v~~ll~~~G-~ 163 (272)
+.++. .++++|||++++++.+.+++... ..+.+..+|+.|.... .+......+ +++..+.++++|+.+| +
T Consensus 75 ~~~l~---~~~~ivi~~s~~~~~~~l~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~lG~~ 148 (276)
T 2i76_A 75 ANHLN---LGDAVLVHCSGFLSSEIFKKSGRASIHPNFSFSSLEKALEMKDQIVFGLEG---DERGLPIVKKIAEEISGK 148 (276)
T ss_dssp HTTTC---CSSCCEEECCSSSCGGGGCSSSEEEEEECSCC--CTTGGGCGGGCCEEECC---CTTTHHHHHHHHHHHCSC
T ss_pred HHHhc---cCCCEEEECCCCCcHHHHHHhhccccchhhhcCCCchhHHHhCCCeEEEEe---ChHHHHHHHHHHHHhCCC
Confidence 98875 57889999887877776654311 0001112345444433 344444433 4567899999999999 5
Q ss_pred eEEcCcccc---hhHHHchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCc--
Q 024121 164 IWRADEKLF---DAITGLSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPG-- 238 (272)
Q Consensus 164 ~~~~~e~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~-- 238 (272)
.++++++++ +..++++++...+.+.++. ..+.+.|++.+++. +.+++.++.+++.+.+ | .+.+++|.
T Consensus 149 ~~~v~~~~~~~~~~~~~l~~n~~~~~~~~a~-~~~~~~Gl~~~~a~--~~~l~~~~~~~~~~~g--p---~~~~tgP~~r 220 (276)
T 2i76_A 149 YFVIPSEKKKAYHLAAVIASNFPVALAYLSK-RIYTLLGLDEPELL--IHTLMKGVADNIKKMR--V---ECSLTGPVKR 220 (276)
T ss_dssp EEECCGGGHHHHHHHHHHHHTTHHHHHHHHH-HHHHTTTCSCHHHH--HHHHHHHHHHHHHHSC--G---GGGCCSHHHH
T ss_pred EEEECHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCChHHHH--HHHHHHHHHHHHHhcC--h---HhhCCCCccc
Confidence 688887643 3444544222222222322 45678999999775 7788888888877654 3 77788998
Q ss_pred ---chHHHHHHHHHh
Q 024121 239 ---GTTIAGIHELEK 250 (272)
Q Consensus 239 ---g~t~~~l~~l~~ 250 (272)
++++.+++.|++
T Consensus 221 ~D~~t~~~~l~~l~~ 235 (276)
T 2i76_A 221 GDWQVVEEERREYEK 235 (276)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhc
Confidence 899999999987
No 31
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.92 E-value=8.6e-24 Score=181.95 Aligned_cols=245 Identities=19% Similarity=0.184 Sum_probs=171.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC--HHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN--LKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~--~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~ 86 (272)
++|||+|||+|.||.+|+.+|.++|+ .+|++| ||+ +++.+.+.+.|+..+.++.++++++|+||+|||++...+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~---~~V~~~-dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~ 98 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGA---IDMAAY-DAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALE 98 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSC---CEEEEE-CSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC---CeEEEE-cCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHH
Confidence 35799999999999999999999996 379999 997 577888888899888899999999999999999998888
Q ss_pred HHHHhchhcCCCCEEEEEcCCCCHH---HHHHHhC----CCCEEEE--ccCchhhhcCCceEEEeCCCCCHHHHHHHHHH
Q 024121 87 VAMQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG----HSRFIRV--MPNTPSAVGEAATVMSLGGTATEEDGELIGKL 157 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~~~~~~---~l~~~~~----~~~~~~~--~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~l 157 (272)
++.++.+.++++++||++++ ++.. .+.+.+. +.+++.. +...+.. ....+++++++ .+ +.++++
T Consensus 99 ~~~~l~~~l~~~~ivvd~st-~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~-~g~l~i~vgg~---~~--~~~~~l 171 (312)
T 3qsg_A 99 VAQQAGPHLCEGALYADFTS-CSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPH-GHRVPLVVDGD---GA--RRFQAA 171 (312)
T ss_dssp HHHHHGGGCCTTCEEEECCC-CCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTT-GGGSEEEEEST---TH--HHHHHH
T ss_pred HHHhhHhhcCCCCEEEEcCC-CCHHHHHHHHHHHHhhcCCCeEEeccccCCchhh-cCCEEEEecCC---hH--HHHHHH
Confidence 89999999999999998754 4443 2222221 2344432 2222322 33455666653 23 889999
Q ss_pred hhhcCCe-EEcCc-ccchhHHHchHHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Q 024121 158 FGSVGKI-WRADE-KLFDAITGLSGPAYIFL----AIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLK 231 (272)
Q Consensus 158 l~~~G~~-~~~~e-~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~ 231 (272)
|+.+|.. +++++ ......++++.+.++.. +.|++. .+++.|+++ +..+.+..+. ++..+ .. ....+.
T Consensus 172 l~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~-la~~~Gld~-~~~~~l~~~~-~~~~~-~~---~~~~~~ 244 (312)
T 3qsg_A 172 FTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALA-AAEKMGLAD-RVLASLDASF-PEHHL-RD---LALYLV 244 (312)
T ss_dssp HHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTTCHH-HHHHHHHHHS-GGGTH-HH---HHHHHH
T ss_pred HHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCH-HHHHHHHhcC-CchhH-HH---hhhHhh
Confidence 9999965 67776 35555566665555533 444444 678999998 5666666554 22111 11 133455
Q ss_pred HhcCCCcchH----HHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 232 DDVASPGGTT----IAGIHELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 232 ~~~~~~~g~t----~~~l~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
+..++|++.. ...++..++.|+...+.+++.+.++++.+.
T Consensus 245 ~~~~~~g~~~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~~~~~ 288 (312)
T 3qsg_A 245 ERNLEHADRRAHELGEVAATLCSVGVEPLVAEAGYRRLTRVAQV 288 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcccchHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhc
Confidence 5555676653 345556678899999999999999988764
No 32
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.92 E-value=8.3e-24 Score=180.83 Aligned_cols=244 Identities=15% Similarity=0.105 Sum_probs=170.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCc-ccHHHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVKDVA 88 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~-~~~~~v~ 88 (272)
.|||+|||+|.||.+|+.+|.++|| +|++| ||++++.+.+.+.|+..+.++.++++ +|+||+|||+ .++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~ 88 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG----GVTVY-DIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV 88 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT----CEEEE-CSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH
Confidence 5799999999999999999999999 99999 99999999999999998889999988 9999999995 5789999
Q ss_pred HHhchhcCCCCEEEEEcCCCCHH---HHHHHhC--CCCEEEEcc--CchhhhcCCc-eEEEeCCCCCHHHHHHHHHHhhh
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMP--NTPSAVGEAA-TVMSLGGTATEEDGELIGKLFGS 160 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~---~l~~~~~--~~~~~~~~p--~~~~~~~~g~-~~~~~~~~~~~~~~~~v~~ll~~ 160 (272)
+++.+.++++++||++++ ++.. .+.+.+. +..++.. | ..|.....|. .+++.+ +++.++.++++|+.
T Consensus 89 ~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~ 163 (296)
T 3qha_A 89 GELAGHAKPGTVIAIHST-ISDTTAVELARDLKARDIHIVDA-PVSGGAAAAARGELATMVGA---DREVYERIKPAFKH 163 (296)
T ss_dssp HHHHTTCCTTCEEEECSC-CCHHHHHHHHHHHGGGTCEEEEC-CEESCHHHHHHTCEEEEEEC---CHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEeCC-CCHHHHHHHHHHHHHcCCEEEeC-CCcCCHHHHhcCCccEEecC---CHHHHHHHHHHHHH
Confidence 999998999999998754 4443 3444443 2334431 2 2233334454 444444 68899999999999
Q ss_pred cCC-eEEcCcccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHH------HHHHHHHHHHHHHHHHhcCCCHHHH
Q 024121 161 VGK-IWRADEKLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELA------LGLASQTVLGAASMVTKSGKHPGQL 230 (272)
Q Consensus 161 ~G~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a------~~~~~~~~~g~~~~~~~~~~~~~~l 230 (272)
+|. .+++++.......+++.+.+....+..+.| .+++.|++++++ .+++..+..++ ...+ .+..+
T Consensus 164 ~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s--~~~~---~~~~~ 238 (296)
T 3qha_A 164 WAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAI--MVRD---NMKDL 238 (296)
T ss_dssp HEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGG--CCCS---SCSCC
T ss_pred HcCCeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccC--HHhh---chhhh
Confidence 995 477777666666666644444443333333 467999999999 66665443333 1111 22222
Q ss_pred HHhcCCCcchH-----HHHHH-------HHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 231 KDDVASPGGTT-----IAGIH-------ELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 231 ~~~~~~~~g~t-----~~~l~-------~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
+. +.|++.. ....+ .-++.++...+.+.+.+.|+++.+.
T Consensus 239 -~~-~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~ 289 (296)
T 3qha_A 239 -EP-DNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLAAGLGV 289 (296)
T ss_dssp -CT-TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTC
T ss_pred -hc-CCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhc
Confidence 23 4676554 22222 3355677777888888888777653
No 33
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.91 E-value=1.1e-23 Score=177.26 Aligned_cols=204 Identities=15% Similarity=0.215 Sum_probs=156.2
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCc-EEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCc
Q 024121 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDR-ICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~-V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~ 81 (272)
|++....|||+|||+|.||..++..|.+.|+ + |.+| +|++++.+++.+ .|+....+..++++++|+||+|+|+
T Consensus 4 m~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~----~~v~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~ 78 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLATNLAKALYRKGF----RIVQVY-SRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKD 78 (266)
T ss_dssp ---CGGGCCEEEECCSHHHHHHHHHHHHHTC----CEEEEE-CSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCH
T ss_pred hhcCCCCCeEEEEcCCHHHHHHHHHHHHCCC----eEEEEE-eCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCH
Confidence 4444456899999999999999999999998 7 8999 999999988877 4888888888888999999999999
Q ss_pred ccHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhCCCCEEEEccCchh-----hhcCCceEEEeCCCCCHHHHHHHHH
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPS-----AVGEAATVMSLGGTATEEDGELIGK 156 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~~~~~~~~~p~~~~-----~~~~g~~~~~~~~~~~~~~~~~v~~ 156 (272)
+.+.+++.++.+.++++++|++++++.+.+.+++.++. .-..||..|. ....+..++..+ .+++..+.+++
T Consensus 79 ~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~v~~--~~~~~~~~~~~ 154 (266)
T 3d1l_A 79 SAFAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPH--YGVFYPMQTFSKQREVDFKEIPFFIEA--SSTEDAAFLKA 154 (266)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSS--EEEEEECCCC---CCCCCTTCCEEEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHh--ccCcCCceecCCCchhhcCCCeEEEec--CCHHHHHHHHH
Confidence 99999999998888899999999999988777665552 1123333321 111223333322 37888999999
Q ss_pred HhhhcC-CeEEcCccc---chhHHHch--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 024121 157 LFGSVG-KIWRADEKL---FDAITGLS--GPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASM 219 (272)
Q Consensus 157 ll~~~G-~~~~~~e~~---~~~~~~~~--~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~ 219 (272)
+|+.+| +.++++++. ++..++++ .+.++..+.+++ +.+.|++++++.+++.+++.++.++
T Consensus 155 l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal---~~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 155 IASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAEL---LKKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp HHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred HHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHhc
Confidence 999999 557787664 66777766 555566666654 3589999999999999998887754
No 34
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.91 E-value=1.7e-22 Score=173.79 Aligned_cols=198 Identities=12% Similarity=0.015 Sum_probs=152.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----------cC--------------ceee
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----------IG--------------VKVL 62 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----------~g--------------~~~~ 62 (272)
++.+||+|||+|.||.+|+..|.++|| +|++| ||++++++++.+ .| +..+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~----~V~l~-d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~ 78 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF----RVKLY-DIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC 78 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe
Confidence 356899999999999999999999999 99999 999988776532 23 4567
Q ss_pred cCchhhhccCCEEEEeeCcc--cHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceE
Q 024121 63 SDNNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATV 139 (272)
Q Consensus 63 ~~~~~~~~~aDivil~v~~~--~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~ 139 (272)
.++.+++++||+||+|||.+ ..++++.++.++++++++|+|.++++++..+++.++ ..++++.||..|..... ...
T Consensus 79 ~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~-lve 157 (319)
T 2dpo_A 79 TNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIP-LVE 157 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCC-EEE
T ss_pred CCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcc-eEE
Confidence 78888899999999999875 356788889988999999999889999998887775 35799999988876543 455
Q ss_pred EEeCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 024121 140 MSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLG 215 (272)
Q Consensus 140 ~~~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g 215 (272)
+++++.++++.++.++++++.+|+. ++++.+..+.+ +...+...+.|++. .+.+.|+++++..+++..++..
T Consensus 158 iv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi---~Nrll~a~~~EA~~-l~~~g~~~~~~id~a~~~g~g~ 230 (319)
T 2dpo_A 158 LVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFV---LNRLQYAIISEAWR-LVEEGIVSPSDLDLVMSDGLGM 230 (319)
T ss_dssp EEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTT---HHHHHHHHHHHHHH-HHHTTSSCHHHHHHHHHTTHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCch---HHHHHHHHHHHHHH-HHHhCCCCHHHHHHHHHhCCCC
Confidence 6778888999999999999999975 77765433321 12222233455554 4566777999999888765543
No 35
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.91 E-value=3.6e-23 Score=173.96 Aligned_cols=237 Identities=14% Similarity=0.184 Sum_probs=167.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r--~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
|||+|||+|+||.+|+.+|.++|+ +|++| +| ++++.+++.+.|+. .++.++++++|+||+|||++...+.+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~----~V~~~-~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~ 73 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGV----EVVTS-LEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA 73 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC----EEEEC-CTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCC----eEEEe-CCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH
Confidence 689999999999999999999999 99999 99 77888888777877 67788889999999999998655556
Q ss_pred HHhchhcCCCCEEEEEcCCCCH---HHHHHHhCCCCEEEE-ccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCCe
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKL---KDLQEWTGHSRFIRV-MPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKI 164 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~---~~l~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~ 164 (272)
.++.+.+++ ++|++ ++++. +.+.+.++...++.. +...|.....|..++++++ .+ +.+++ |+.+|..
T Consensus 74 ~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g~~~~~v~~~~~~~~~g~~~~~~g~---~~--~~~~~-l~~~g~~ 144 (264)
T 1i36_A 74 RRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGGFVDAAIMGSVRRKGADIRIIASGR---DA--EEFMK-LNRYGLN 144 (264)
T ss_dssp HHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSEEEEEEECSCHHHHGGGCEEEEEST---TH--HHHHG-GGGGTCE
T ss_pred HHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCCeeeeeeeCCccccccCCeEEecCC---cH--HHhhh-HHHcCCe
Confidence 777777755 78876 55554 356666653213221 1233444455666555553 22 78888 9999975
Q ss_pred -EEcCcc-cchhHHHchHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCcc
Q 024121 165 -WRADEK-LFDAITGLSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGG 239 (272)
Q Consensus 165 -~~~~e~-~~~~~~~~~~~~~~~~~~~~l~~~---~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~g 239 (272)
++++++ ......+++.+.++..+...+.|+ +++.|++++ +.+.+.+++ +...+.. .+ .+.++.++|++
T Consensus 145 ~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~-g~~~~~~----~~-~~~~~~~~~g~ 217 (264)
T 1i36_A 145 IEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTE-GNDFRES----AI-SRLKSSCIHAR 217 (264)
T ss_dssp EEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTS-CSSTHHH----HH-HHHHHHHHTHH
T ss_pred eEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhc-CccHHHH----HH-HHhcCCCCcch
Confidence 677763 444555555566655555555555 789999986 777776654 2111111 22 35556667888
Q ss_pred hHHHHH----HHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024121 240 TTIAGI----HELEKSGFRGILMNAVVAAAKRSREL 271 (272)
Q Consensus 240 ~t~~~l----~~l~~~~~~~~~~~~~~~~~~r~~~~ 271 (272)
.+...+ +..++. +...+.+++.+.++|+.++
T Consensus 218 ~~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~~~~~ 252 (264)
T 1i36_A 218 RRYEEMKEVQDMLAEV-IDPVMPTCIIRIFDKLKDV 252 (264)
T ss_dssp HHHHHHHHHHHHHHTT-SCCSHHHHHHHHHHHHCC-
T ss_pred hhHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHc
Confidence 777766 667888 9999999999999998765
No 36
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.90 E-value=8.7e-22 Score=167.21 Aligned_cols=197 Identities=15% Similarity=0.099 Sum_probs=151.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-----------C--------------cee
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-----------G--------------VKV 61 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~-----------g--------------~~~ 61 (272)
||+++||+|||+|.||++||..|.++|+ +|++| ||++++++++.+. | +..
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~----~V~l~-d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 75 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGF----AVTAY-DINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY 75 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC----eEEEE-eCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE
Confidence 3567899999999999999999999999 99999 9999887766542 2 456
Q ss_pred ecCchhhhccCCEEEEeeCcc--cHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCce
Q 024121 62 LSDNNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAAT 138 (272)
Q Consensus 62 ~~~~~~~~~~aDivil~v~~~--~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~ 138 (272)
+.+..+++++||+||+|+|++ ...+++.++.+.++++++++|.+++++...+.+.++ ..++++.||..|...... .
T Consensus 76 ~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~l-v 154 (283)
T 4e12_A 76 SDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNT-A 154 (283)
T ss_dssp ESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCE-E
T ss_pred eCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCce-E
Confidence 677778889999999999987 678888899888899999999889999988887775 357899999877665443 3
Q ss_pred EEEeCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 024121 139 VMSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADGGVAAGLPRELALGLASQTV 213 (272)
Q Consensus 139 ~~~~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~ 213 (272)
.++++...+++.++.++++++.+|+. ++++.+..+.+. ...+...+.|++. .+.+.+.++++..+++..++
T Consensus 155 evv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~---nr~~~~~~~ea~~-l~~~g~~~~~~id~~~~~~~ 226 (283)
T 4e12_A 155 EVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYVL---NSLLVPLLDAAAE-LLVDGIADPETIDKTWRIGT 226 (283)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTTTH---HHHHHHHHHHHHH-HHHTTSCCHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCEEe---hHHHHHHHHHHHH-HHHhCCCCHHHHHHHHHhcc
Confidence 56677778999999999999999975 677544333321 1222233445543 45566689999888776543
No 37
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.90 E-value=3.5e-22 Score=174.38 Aligned_cols=201 Identities=14% Similarity=0.135 Sum_probs=147.2
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccC---CEEEEeeC
Q 024121 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYS---DVVVFSVK 80 (272)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~a---Divil~v~ 80 (272)
-|.|++.|||+|||+|.||.+|+.+|.++|+ +|++| ||++++.+.+.+.|+..+.++.++++++ |+||+|||
T Consensus 16 ~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~----~V~v~-dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 16 ENLYFQSMQIGMIGLGRMGADMVRRLRKGGH----ECVVY-DLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred chhhhcCCEEEEECchHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 4567778999999999999999999999999 99999 9999999999988988888999998888 99999999
Q ss_pred cccHHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHHhC--CCCEEEE-ccCchhhhcCCceEEEeCCCCCHHHHHHHH
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRV-MPNTPSAVGEAATVMSLGGTATEEDGELIG 155 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~--~~~~~~~-~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~ 155 (272)
+.++++++.++.+.++++++||++++..+. ..+.+.+. +.+++.. +.+.+.....|.++++.| +++.++.++
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~~im~GG---~~~a~~~~~ 167 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGYCLMIGG---EKQAVERLD 167 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCCEEEEES---CHHHHHHTH
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCCeeeecC---CHHHHHHHH
Confidence 889999999999999999999988655432 23333332 3344432 112233334555555554 689999999
Q ss_pred HHhhhcC--------------------C-eEEcCcccchhHHHchHHHHHHHHHHHHHH---HHHHc-------------
Q 024121 156 KLFGSVG--------------------K-IWRADEKLFDAITGLSGPAYIFLAIEALAD---GGVAA------------- 198 (272)
Q Consensus 156 ~ll~~~G--------------------~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~------------- 198 (272)
++|+.+| + .+++++.....+++++.+.+.+..+.++.| .+++.
T Consensus 168 ~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~ 247 (358)
T 4e21_A 168 PVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAET 247 (358)
T ss_dssp HHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC----------
T ss_pred HHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Confidence 9999999 2 467777777777777633333333333333 34555
Q ss_pred -----------CCCHHHHHHHHHHH
Q 024121 199 -----------GLPRELALGLASQT 212 (272)
Q Consensus 199 -----------Gl~~~~a~~~~~~~ 212 (272)
|++.++..+++..+
T Consensus 248 ~~~~~~~~~~~~~d~~~i~~~~~~g 272 (358)
T 4e21_A 248 APLRNPDFYRYDLDLADITEVWRRG 272 (358)
T ss_dssp ----CGGGCCCCCCHHHHHHHHTTT
T ss_pred cccccchhcccCCCHHHHHHHHhCc
Confidence 89999988887644
No 38
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.90 E-value=5.6e-22 Score=179.55 Aligned_cols=195 Identities=11% Similarity=0.116 Sum_probs=150.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc----CceeecCchhhhcc---CCEEEEeeC
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI----GVKVLSDNNAVVEY---SDVVVFSVK 80 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~----g~~~~~~~~~~~~~---aDivil~v~ 80 (272)
|..++|+|||+|.||++|+.+|.++|+ +|++| ||++++.+.+.+. |+..+.++.+++++ +|+||+|||
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~----~V~v~-~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp 87 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGY----TVSIF-NRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVK 87 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTC----CEEEE-CSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSC
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCC----eEEEE-eCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECC
Confidence 467899999999999999999999999 99999 9999999988874 78888888888876 999999999
Q ss_pred c-ccHHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHHhC--CCCEEEEccC--chhhhcCCceEEEeCCCCCHHHHHH
Q 024121 81 P-QVVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGEL 153 (272)
Q Consensus 81 ~-~~~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~~~~ 153 (272)
+ +.++++++++.+.++++++||+++++.+. ..+.+.++ +..++. .|. .|.....|.++++.+ +++..+.
T Consensus 88 ~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~-~pv~gg~~~a~~g~~i~~gg---~~~~~~~ 163 (480)
T 2zyd_A 88 AGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIG-TGVSGGEEGALKGPSIMPGG---QKEAYEL 163 (480)
T ss_dssp SSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESHHHHHHHCCEEEEES---CHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeC-CccccCHhHHhcCCeEEecC---CHHHHHH
Confidence 8 57999999999999999999999888754 34555553 234443 232 344445566555544 6889999
Q ss_pred HHHHhhhcCCe--------EEcCcccchhHHHchHHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHHH
Q 024121 154 IGKLFGSVGKI--------WRADEKLFDAITGLSGPAYIFLAIEALADG---GVA-AGLPRELALGLASQ 211 (272)
Q Consensus 154 v~~ll~~~G~~--------~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~~-~Gl~~~~a~~~~~~ 211 (272)
++++|+.+|.. .++++......++++.+.+.+.+++.+.|+ +++ .|++++++.+++..
T Consensus 164 v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~ 233 (480)
T 2zyd_A 164 VAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTE 233 (480)
T ss_dssp HHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999953 556776666666666455555556666665 567 69999999888753
No 39
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.90 E-value=4.7e-23 Score=176.10 Aligned_cols=248 Identities=16% Similarity=0.169 Sum_probs=169.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC-cccHHHHHH
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDVAM 89 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~-~~~~~~v~~ 89 (272)
|||+|||+|+||.+++.+|.+.|+ +|++| +|++++.+.+.+.|+....++.++++++|+||+||| +.++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~ 75 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGY----PLIIY-DVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYS 75 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTC----CEEEE-CSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHh
Confidence 589999999999999999999999 99999 999999998888888888888888899999999995 567888887
Q ss_pred Hh---chhcCCCCEEEEEcCCCCHHHHHH---HhCCCCEEEEccCchhh-----hcCCceEEEeCCCCCHHHHHHHHHHh
Q 024121 90 QI---RPLLSRKKLLVSVAAGVKLKDLQE---WTGHSRFIRVMPNTPSA-----VGEAATVMSLGGTATEEDGELIGKLF 158 (272)
Q Consensus 90 ~l---~~~l~~~~~iis~~~~~~~~~l~~---~~~~~~~~~~~p~~~~~-----~~~g~~~~~~~~~~~~~~~~~v~~ll 158 (272)
++ .+.++++++||+ +++++.+..++ .++... +.+|+.|.. ...+...++.+ .+++..+.++++|
T Consensus 76 ~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~g--~~~~~~p~~~g~~~a~~~~~~~~~~--~~~~~~~~v~~l~ 150 (296)
T 2gf2_A 76 GANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKMG--AVFMDAPVSGGVGAARSGNLTFMVG--GVEDEFAAAQELL 150 (296)
T ss_dssp STTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHTT--CEEEECCEESHHHHHHHTCEEEEEE--SCGGGHHHHHHHH
T ss_pred CchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHcC--CEEEEcCCCCChhHHhcCcEEEEeC--CCHHHHHHHHHHH
Confidence 64 446778999999 78888765443 232110 112222322 22444444444 3688899999999
Q ss_pred hhcCCe-EEcCcccchhHHHchHHHHH----HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH--
Q 024121 159 GSVGKI-WRADEKLFDAITGLSGPAYI----FLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLK-- 231 (272)
Q Consensus 159 ~~~G~~-~~~~e~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~~~~~~~~~~~l~-- 231 (272)
+.+|.. ++++........++..+.+. ..+.|++. .+.+.|++++++.+++..+. +...++...+..|..+.
T Consensus 151 ~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~-~~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~s 228 (296)
T 2gf2_A 151 GCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMN-LGIRLGLDPKLLAKILNMSS-GRCWSSDTYNPVPGVMDGV 228 (296)
T ss_dssp TTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHHTST-TCBHHHHHSCSSTTTCSSS
T ss_pred HHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHhCc-ccCHHHHhcCCcccccccc
Confidence 999964 66665444444444322221 34555555 67899999999988877532 22233322222233322
Q ss_pred --HhcCCCcchHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHhh
Q 024121 232 --DDVASPGGTTIA-------GIHELEKSGFRGILMNAVVAAAKRSRE 270 (272)
Q Consensus 232 --~~~~~~~g~t~~-------~l~~l~~~~~~~~~~~~~~~~~~r~~~ 270 (272)
...+.+++.... .++..++.|+...+.+++.+.++++.+
T Consensus 229 ~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~ 276 (296)
T 2gf2_A 229 PSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCA 276 (296)
T ss_dssp GGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT
T ss_pred hhccCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 223345443332 345557789999999999998888775
No 40
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.2e-21 Score=177.87 Aligned_cols=192 Identities=15% Similarity=0.161 Sum_probs=149.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cCceeecCchhhhcc---CCEEEEeeCc
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IGVKVLSDNNAVVEY---SDVVVFSVKP 81 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----~g~~~~~~~~~~~~~---aDivil~v~~ 81 (272)
..+|||||+|.||++|+.+|.++|+ +|++| ||++++++++.+ .|+..+.++.+++++ +|+||+|||+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~----~V~v~-dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~ 84 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGF----TVCAY-NRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKA 84 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCC
Confidence 4689999999999999999999999 99999 999999999887 578878888888776 9999999998
Q ss_pred -ccHHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHHhC--CCCEEEEcc--CchhhhcCCceEEEeCCCCCHHHHHHH
Q 024121 82 -QVVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMP--NTPSAVGEAATVMSLGGTATEEDGELI 154 (272)
Q Consensus 82 -~~~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~--~~~~~~~~p--~~~~~~~~g~~~~~~~~~~~~~~~~~v 154 (272)
+.++++++++.+.++++++||+++++.+. ..+.+.+. +.+++. +| +.|.....|.+++..+ +++.++.+
T Consensus 85 ~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~-~pVsgg~~~a~~G~~im~gg---~~e~~~~v 160 (497)
T 2p4q_A 85 GAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVG-SGVSGGEEGARYGPSLMPGG---SEEAWPHI 160 (497)
T ss_dssp SHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESHHHHHHHCCEEEEEE---CGGGHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeC-CCcccChhHhhcCCeEEecC---CHHHHHHH
Confidence 48999999999999999999998776653 33444443 344553 24 4455556666555544 68899999
Q ss_pred HHHhhhcCCe-------EEcCcccchhHHHchHHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHH
Q 024121 155 GKLFGSVGKI-------WRADEKLFDAITGLSGPAYIFLAIEALADG---GVA-AGLPRELALGLAS 210 (272)
Q Consensus 155 ~~ll~~~G~~-------~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~~-~Gl~~~~a~~~~~ 210 (272)
+++|+.+|.. .++++......++++.+.+.+..+..+.|+ +++ .|++++++.+++.
T Consensus 161 ~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~ 227 (497)
T 2p4q_A 161 KNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFA 227 (497)
T ss_dssp HHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 9999999954 566776666666666555555556666665 677 5999999988885
No 41
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.88 E-value=4.3e-21 Score=162.70 Aligned_cols=188 Identities=19% Similarity=0.149 Sum_probs=144.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-------CceeecCchhhhccCCEEEEeeCcc
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-------GVKVLSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~-------g~~~~~~~~~~~~~aDivil~v~~~ 82 (272)
.++|+|||+|.||++||.+|+ +|+ +|++| ||++++++++.+. ++..+.++.+ +++||+||.|+|.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~----~V~v~-d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~ 84 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKH----EVVLQ-DVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFED 84 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS----EEEEE-CSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCC----EEEEE-ECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCC
Confidence 479999999999999999999 999 99999 9999999888776 7777888876 89999999999876
Q ss_pred c-HH-HHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhh
Q 024121 83 V-VK-DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFG 159 (272)
Q Consensus 83 ~-~~-~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~ 159 (272)
. ++ .++.++.+. +++++++.++++++..+++.+. ..++++.|+..|.... ....++++..++++.++.++++++
T Consensus 85 ~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~-~lveiv~g~~t~~~~~~~~~~l~~ 161 (293)
T 1zej_A 85 LNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVM-PLVEIVISRFTDSKTVAFVEGFLR 161 (293)
T ss_dssp HHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTC-CEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccC-CEEEEECCCCCCHHHHHHHHHHHH
Confidence 4 44 455666654 8888888778899988877554 2468888887776543 355567787789999999999999
Q ss_pred hcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 024121 160 SVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLG 215 (272)
Q Consensus 160 ~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g 215 (272)
.+|+. +++++. .++...+...+.|++. .+.+ |+++++..+++..++..
T Consensus 162 ~lGk~~v~v~d~------fi~Nrll~~~~~EA~~-l~~~-Gv~~e~id~~~~~g~g~ 210 (293)
T 1zej_A 162 ELGKEVVVCKGQ------SLVNRFNAAVLSEASR-MIEE-GVRAEDVDRVWKHHLGL 210 (293)
T ss_dssp HTTCEEEEEESS------CHHHHHHHHHHHHHHH-HHHH-TCCHHHHHHHHHTTHHH
T ss_pred HcCCeEEEeccc------ccHHHHHHHHHHHHHH-HHHh-CCCHHHHHHHHHhcCCC
Confidence 99975 677653 1112233334556655 3455 88999999888755443
No 42
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.88 E-value=6.3e-22 Score=162.02 Aligned_cols=154 Identities=14% Similarity=0.220 Sum_probs=127.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEE-EeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICT-AVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
|++|||+|||+|+||.+++..|.++|+ +|.+ | +|++++++++.+ .|+....+..+.++++|+||+|||++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~----~V~~v~-~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~~~ 95 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQI----PAIIAN-SRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDSIA 95 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTC----CEEEEC-TTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGGHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCC----EEEEEE-CCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHHHH
Confidence 456899999999999999999999999 9998 8 999999988776 57766667777789999999999999999
Q ss_pred HHHHHhchhcCCCCEEEEEcCCC--------------CHHHHHHHhCCCCEEEEccCchhhhcC-C-------ceEEEeC
Q 024121 86 DVAMQIRPLLSRKKLLVSVAAGV--------------KLKDLQEWTGHSRFIRVMPNTPSAVGE-A-------ATVMSLG 143 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~~~--------------~~~~l~~~~~~~~~~~~~p~~~~~~~~-g-------~~~~~~~ 143 (272)
+++.++.+ + ++++||++++++ ..+.+++.+++.++++.+|+.|..... + ..+++.+
T Consensus 96 ~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g 173 (220)
T 4huj_A 96 DIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSG 173 (220)
T ss_dssp HHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEEEESCSSCHHHHTSCSBCSSCEEEEEEEE
T ss_pred HHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEEECCCCCCHHHhhhCcccCCCCeeEEEeC
Confidence 99999877 5 688999999888 357788888877899999988776544 2 2344444
Q ss_pred CCCCHHHHHHHHHHhhhcCCe-EEcCcc
Q 024121 144 GTATEEDGELIGKLFGSVGKI-WRADEK 170 (272)
Q Consensus 144 ~~~~~~~~~~v~~ll~~~G~~-~~~~e~ 170 (272)
. +++..+.++++|+.+|.. +..++-
T Consensus 174 ~--~~~~~~~v~~l~~~~G~~~~~~G~l 199 (220)
T 4huj_A 174 N--HSDANRQVAELISSLGFAPVDLGTL 199 (220)
T ss_dssp S--CHHHHHHHHHHHHHTTCEEEECCSH
T ss_pred C--CHHHHHHHHHHHHHhCCCeEeeCCh
Confidence 3 688999999999999965 666653
No 43
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.88 E-value=5.4e-21 Score=164.78 Aligned_cols=240 Identities=18% Similarity=0.196 Sum_probs=154.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCH-------HHHHHHHHcCceeec-CchhhhccCCEEEEeeC
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSG-VLPPDRICTAVHSNL-------KRRDAFESIGVKVLS-DNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g-~~~~~~V~v~~~r~~-------~~~~~l~~~g~~~~~-~~~~~~~~aDivil~v~ 80 (272)
+|||+|||+|.||.+|+.+|.++| + +|++| ||++ +..+.+.+.|+ +. ++.++++++|+||+|||
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~----~V~~~-dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp 96 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAA----RLAAY-DLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVV 96 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCS----EEEEE-CGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCC----eEEEE-eCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecC
Confidence 479999999999999999999999 9 99999 9997 45566666777 56 78899999999999999
Q ss_pred cccHHHHHHHhchhcCCCCEEEEEcCCCCHH---HHHHHhC--CCCEEEE-ccC-chhhhcCCceEEEeCCCCCHHHHHH
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRV-MPN-TPSAVGEAATVMSLGGTATEEDGEL 153 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~---~l~~~~~--~~~~~~~-~p~-~~~~~~~g~~~~~~~~~~~~~~~~~ 153 (272)
++...+++.++.+.++++++||+++ +++.. .+.+.+. +..++.. +.+ .+.. ....+++++++ .+ +.
T Consensus 97 ~~~~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~-~g~l~i~vgg~---~~--~~ 169 (317)
T 4ezb_A 97 GAATKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATGKGSFVEGAVMARVPPY-AEKVPILVAGR---RA--VE 169 (317)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTT-GGGSEEEEEST---TH--HH
T ss_pred CHHHHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHcCCeEEeccCCCCchhh-cCCEEEEEeCC---hH--HH
Confidence 9988888889999999999999875 45543 3444443 2333321 111 2222 22345566653 23 88
Q ss_pred HHHHhhhcCCe-EEcCc-ccchhHHHchHHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHH-HHHHHHhcCCCH
Q 024121 154 IGKLFGSVGKI-WRADE-KLFDAITGLSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLG-AASMVTKSGKHP 227 (272)
Q Consensus 154 v~~ll~~~G~~-~~~~e-~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gl~~~~a~~~~~~~~~g-~~~~~~~~~~~~ 227 (272)
++++|+.+|.. +++++ ......++++.+.+....+..+.| .+++.|++++ .++.+..+..+ .... ..
T Consensus 170 ~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~-~~~~l~~~~~~~~~~~------~~ 242 (317)
T 4ezb_A 170 VAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTER-ILDSVQETFPGLDWRD------VA 242 (317)
T ss_dssp HHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHSTTSCHHH------HH
T ss_pred HHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHhcCccccHHH------hh
Confidence 99999999965 77776 566667777644444333333333 4679999995 44444433211 1110 01
Q ss_pred HHHHHhcCCCcchH----HHHHHHHHhCCHHHHHHHHHHHH----HHHHhh
Q 024121 228 GQLKDDVASPGGTT----IAGIHELEKSGFRGILMNAVVAA----AKRSRE 270 (272)
Q Consensus 228 ~~l~~~~~~~~g~t----~~~l~~l~~~~~~~~~~~~~~~~----~~r~~~ 270 (272)
..+.+..+.|++.. ...++..++.|+...+.+++.+. +++..+
T Consensus 243 ~~~~~~~~~~g~~~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~a~~~~~~ 293 (317)
T 4ezb_A 243 DYYLSRTFEHGARRVTEMTEAAETIESFGLNAPMSRAACETIAAAHAAMKD 293 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHH
Confidence 12222223343321 22344445667777777666666 555443
No 44
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.87 E-value=2.4e-20 Score=159.78 Aligned_cols=190 Identities=14% Similarity=0.118 Sum_probs=142.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH-----------Hc------------------Cce
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE-----------SI------------------GVK 60 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~-----------~~------------------g~~ 60 (272)
++||+|||+|.||++||..|.++|+ +|++| ||++++++++. +. ++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~----~V~~~-d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~ 89 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGH----TVVLV-DQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA 89 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceE
Confidence 4789999999999999999999999 99999 99998776532 12 245
Q ss_pred eecCchhhhccCCEEEEeeCccc--HHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCc
Q 024121 61 VLSDNNAVVEYSDVVVFSVKPQV--VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAA 137 (272)
Q Consensus 61 ~~~~~~~~~~~aDivil~v~~~~--~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~ 137 (272)
.+.++.+++++||+||+|||.+. ..+++.++.++++++++|++.+++++...+.+.+. ..++++.||..|.......
T Consensus 90 ~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~ 169 (302)
T 1f0y_A 90 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLV 169 (302)
T ss_dssp EESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEE
T ss_pred EecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceE
Confidence 56677778899999999998763 46788889888888999998889999988877665 3568999998887654433
Q ss_pred eEEEeCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 024121 138 TVMSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYI-FLAIEALADGGVAAGLPRELALGLASQ 211 (272)
Q Consensus 138 ~~~~~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~Gl~~~~a~~~~~~ 211 (272)
.++++...+++..+.+.++++.+|+. +++.+. .. ...+.++ ..+.|++. .+.+.|+++++...++..
T Consensus 170 -~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~-~g----~i~nr~l~~~~~Ea~~-l~~~g~~~~~~id~~~~~ 238 (302)
T 1f0y_A 170 -EVIKTPMTSQKTFESLVDFSKALGKHPVSCKDT-PG----FIVNRLLVPYLMEAIR-LYERGDASKEDIDTAMKL 238 (302)
T ss_dssp -EEECCTTCCHHHHHHHHHHHHHTTCEEEEECSC-TT----TTHHHHHHHHHHHHHH-HHHTTSSCHHHHHHHHHH
T ss_pred -EEeCCCCCCHHHHHHHHHHHHHcCCceEEecCc-cc----ccHHHHHHHHHHHHHH-HHHcCCCCHHHHHHHHHh
Confidence 45677778999999999999999965 665542 11 1112222 22334443 456677899887766653
No 45
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.87 E-value=6.3e-21 Score=163.98 Aligned_cols=157 Identities=12% Similarity=0.175 Sum_probs=120.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeec------------Cchhhhc---cCC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLS------------DNNAVVE---YSD 73 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~------------~~~~~~~---~aD 73 (272)
++|||+|||+|+||++++..|.++|+ +|++| +|++++.+.+.+.|+.... +..++.+ ++|
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 76 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGN----DVTLI-DQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVD 76 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCC----cEEEE-ECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCC
Confidence 45899999999999999999999999 99999 9999999888876654321 3334444 899
Q ss_pred EEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCH-HHHHHHhCCCCEEE---------EccCchhhhcCCceEEEeC
Q 024121 74 VVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL-KDLQEWTGHSRFIR---------VMPNTPSAVGEAATVMSLG 143 (272)
Q Consensus 74 ivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~-~~l~~~~~~~~~~~---------~~p~~~~~~~~g~~~~~~~ 143 (272)
+||+|||++++.++++++.++++++++|+++++|++. +.+++.++..+++. ..|+.+...+.|...+...
T Consensus 77 ~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~ 156 (316)
T 2ew2_A 77 LIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENI 156 (316)
T ss_dssp EEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEES
T ss_pred EEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeec
Confidence 9999999999999999999999899999999898876 66777666334542 3455555555666666544
Q ss_pred CCCCHHHHHHHHHHhhhcCCeEEcCcc
Q 024121 144 GTATEEDGELIGKLFGSVGKIWRADEK 170 (272)
Q Consensus 144 ~~~~~~~~~~v~~ll~~~G~~~~~~e~ 170 (272)
.+.+++..+.++++|+.+|..++..++
T Consensus 157 ~~~~~~~~~~~~~ll~~~g~~~~~~~d 183 (316)
T 2ew2_A 157 DPSGKKFALEVVDVFQKAGLNPSYSSN 183 (316)
T ss_dssp SGGGHHHHHHHHHHHHHTTCCEEECTT
T ss_pred CCCccHHHHHHHHHHHhCCCCcEEchh
Confidence 445678889999999999965443343
No 46
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.87 E-value=1e-20 Score=164.36 Aligned_cols=247 Identities=16% Similarity=0.202 Sum_probs=159.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC-----------ceeecCchhhhccCCEEEEe
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG-----------VKVLSDNNAVVEYSDVVVFS 78 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g-----------~~~~~~~~~~~~~aDivil~ 78 (272)
.|||+|||+|+||++|+.+|.++|+ +|++| +|++++.+.+.+.| +..+.++.+ ++++|+||+|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~----~V~~~-~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~ 87 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGE----EVILW-ARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIA 87 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC----eEEEE-eCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEE
Confidence 4899999999999999999999999 99999 99999999888765 466777778 8899999999
Q ss_pred eCcccHHHHHHHhchhcCCCCEEEEEcCCCCHH---HHHHH----hCCCCEEEEccCchhhhcCCc-eEEEeCCCCCHHH
Q 024121 79 VKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEW----TGHSRFIRVMPNTPSAVGEAA-TVMSLGGTATEED 150 (272)
Q Consensus 79 v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~---~l~~~----~~~~~~~~~~p~~~~~~~~g~-~~~~~~~~~~~~~ 150 (272)
||++++++++.++.+ ++++||++++|++.+ .+.+. ++....++..|+.+...+.|. +.++.+. .+
T Consensus 88 vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~g~---~~- 160 (335)
T 1z82_A 88 IPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTLAG---EN- 160 (335)
T ss_dssp SCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHHHHTTCCEEEEEEE---TT-
T ss_pred CCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHHHhCCCceEEEEEe---hh-
Confidence 999999999988776 788999999887653 23332 331135678899888776665 3333332 12
Q ss_pred HHHHHHHhhhcCCeEEcCcccchhH------------H----Hch-HH----HHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 024121 151 GELIGKLFGSVGKIWRADEKLFDAI------------T----GLS-GP----AYIFLAIEALADGGVAAGLPRELALGLA 209 (272)
Q Consensus 151 ~~~v~~ll~~~G~~~~~~e~~~~~~------------~----~~~-~~----~~~~~~~~~l~~~~~~~Gl~~~~a~~~~ 209 (272)
.+.++++|+..|...+..++..... + ... ++ .++...+..+...+++.|++++++.++.
T Consensus 161 ~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~l~ 240 (335)
T 1z82_A 161 SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLA 240 (335)
T ss_dssp HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTT
T ss_pred HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcccc
Confidence 7889999999886544344322100 0 000 11 2222233333345779999998765431
Q ss_pred --HH---HHHH-------HHHHHHhcCCCHHHHHHhcCCCc--chHH-HHHHHHHhCCHHHHHHHHHHHHHHHHhh
Q 024121 210 --SQ---TVLG-------AASMVTKSGKHPGQLKDDVASPG--GTTI-AGIHELEKSGFRGILMNAVVAAAKRSRE 270 (272)
Q Consensus 210 --~~---~~~g-------~~~~~~~~~~~~~~l~~~~~~~~--g~t~-~~l~~l~~~~~~~~~~~~~~~~~~r~~~ 270 (272)
.. +..+ ....+. .+.+++.+.....+.- -.+. ..++..++.|+...+.+++.+.+++.++
T Consensus 241 ~~~~~~~t~~s~~~~n~~~~~~~~-~g~~~~~~~~~~g~~~e~~~~~~~v~~~a~~~gv~~P~~~~v~~~~~~~~~ 315 (335)
T 1z82_A 241 GIGDLMVTCNSRYSRNRRFGELIA-RGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKP 315 (335)
T ss_dssp THHHHHHHHHCTTCHHHHHHHHHH-HTCCHHHHHHTCSSCCTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCCC
T ss_pred cccceeeeccCccCcHHHHHHHHh-CCCCHHHHHHhcCCeeeHHHHHHHHHHHHHHhCCCCcHHHHHHHHHhCCCC
Confidence 00 0000 111221 2344554444332211 1122 2333347788888888888888776553
No 47
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.86 E-value=1.2e-20 Score=169.97 Aligned_cols=194 Identities=12% Similarity=0.159 Sum_probs=144.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc---C--ceeecCchhhhc---cCCEEEEeeC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI---G--VKVLSDNNAVVE---YSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~---g--~~~~~~~~~~~~---~aDivil~v~ 80 (272)
.+|+|||||+|.||.+|+.+|.++|+ +|++| ||++++.+.+.+. + +..+.++.++++ ++|+||+|||
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~----~V~v~-dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGF----VVCAF-NRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 56899999999999999999999999 99999 9999999988874 2 334578888776 5999999999
Q ss_pred cc-cHHHHHHHhchhcCCCCEEEEEcCCCCHH--HHHHHhC--CCCEEEE-ccCchhhhcCCceEEEeCCCCCHHHHHHH
Q 024121 81 PQ-VVKDVAMQIRPLLSRKKLLVSVAAGVKLK--DLQEWTG--HSRFIRV-MPNTPSAVGEAATVMSLGGTATEEDGELI 154 (272)
Q Consensus 81 ~~-~~~~v~~~l~~~l~~~~~iis~~~~~~~~--~l~~~~~--~~~~~~~-~p~~~~~~~~g~~~~~~~~~~~~~~~~~v 154 (272)
+. .++++++++.++++++++||+++++.+.. .+.+.+. +.+++.. +.+.+.....|..++..| +++.++.+
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~~im~GG---~~ea~~~v 154 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGG---NKEAWPHI 154 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEE---CGGGHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCCeeecCC---CHHHHHHH
Confidence 85 78999999999999999999987665432 2333332 3445543 112333334566555544 68899999
Q ss_pred HHHhhhcCC-e-------EEcCcccchhHHHchHHHHHHHHHHHHHH---HHHH-cCCCHHHHHHHHH
Q 024121 155 GKLFGSVGK-I-------WRADEKLFDAITGLSGPAYIFLAIEALAD---GGVA-AGLPRELALGLAS 210 (272)
Q Consensus 155 ~~ll~~~G~-~-------~~~~e~~~~~~~~~~~~~~~~~~~~~l~~---~~~~-~Gl~~~~a~~~~~ 210 (272)
+++|+.+|. . +++++.....+++++.+.+.+..+..+.| .+++ .|+++++..+++.
T Consensus 155 ~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~ 222 (484)
T 4gwg_A 155 KTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFE 222 (484)
T ss_dssp HHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 999999984 4 56777777777777744444444444444 3567 8999999888863
No 48
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.86 E-value=2.2e-20 Score=169.17 Aligned_cols=195 Identities=11% Similarity=0.103 Sum_probs=147.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc----CceeecCchhhhcc---CCEEEEeeC
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI----GVKVLSDNNAVVEY---SDVVVFSVK 80 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~----g~~~~~~~~~~~~~---aDivil~v~ 80 (272)
|.++||+|||+|.||++|+.+|.++|+ +|.+| +|++++.+.+.+. |+..+.++.+++++ +|+||+|||
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~----~V~v~-dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp 77 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGY----TVAIY-NRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQ 77 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCC
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCC----EEEEE-cCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEcc
Confidence 345789999999999999999999999 99999 9999999888774 78777888888776 999999999
Q ss_pred cc-cHHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHHhC--CCCEEEEccC--chhhhcCCceEEEeCCCCCHHHHHH
Q 024121 81 PQ-VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGEL 153 (272)
Q Consensus 81 ~~-~~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~~~~ 153 (272)
+. .++++++++.+.++++++||+++++.+. ..+.+.++ +..++. +|. .|.....|.+++..+ +++..+.
T Consensus 78 ~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~-~pv~gg~~~a~~g~~i~~gg---~~~~~~~ 153 (474)
T 2iz1_A 78 AGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIG-TGVSGGEKGALLGPSMMPGG---QKEAYDL 153 (474)
T ss_dssp TTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEE-EEECSHHHHHHHCCCEEEEE---CHHHHHH
T ss_pred CchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEEC-CCCCCChhhhccCCeEEecC---CHHHHHH
Confidence 84 7899999999999999999998777643 45555554 233443 232 244345566555443 6889999
Q ss_pred HHHHhhhcCCe---------EEcCcccchhHHHchHHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHHH
Q 024121 154 IGKLFGSVGKI---------WRADEKLFDAITGLSGPAYIFLAIEALADG---GVA-AGLPRELALGLASQ 211 (272)
Q Consensus 154 v~~ll~~~G~~---------~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~~-~Gl~~~~a~~~~~~ 211 (272)
++++|+.+|.. .++++.......+++.+.+.+..+..+.|+ +++ .|++++++.+++..
T Consensus 154 v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~ 224 (474)
T 2iz1_A 154 VAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEE 224 (474)
T ss_dssp HHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999953 455665555566665444444455556555 667 79999998888753
No 49
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.86 E-value=9.8e-21 Score=157.43 Aligned_cols=169 Identities=13% Similarity=0.144 Sum_probs=129.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH--------------HHHHHH-cCceeecCchhhhcc
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKR--------------RDAFES-IGVKVLSDNNAVVEY 71 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~--------------~~~l~~-~g~~~~~~~~~~~~~ 71 (272)
....+||+|||+|+||++|+.+|.++|+ +|++| +|++++ .+++.+ .+...+.++.+++++
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 90 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGH----EVTIG-TRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAG 90 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhc
Confidence 3456899999999999999999999999 99999 999987 555554 455556778888999
Q ss_pred CCEEEEeeCcccHHHHHHHh-chhcCCCCEEEEEcCCC----------------C-HHHHHHHhCCCCEEEEccCchhhh
Q 024121 72 SDVVVFSVKPQVVKDVAMQI-RPLLSRKKLLVSVAAGV----------------K-LKDLQEWTGHSRFIRVMPNTPSAV 133 (272)
Q Consensus 72 aDivil~v~~~~~~~v~~~l-~~~l~~~~~iis~~~~~----------------~-~~~l~~~~~~~~~~~~~p~~~~~~ 133 (272)
+|+||+|||++.+.+++.++ .+.+ ++++||++++++ . .+.+++.+++.++++.+++.+..+
T Consensus 91 aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~a~v 169 (245)
T 3dtt_A 91 AELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMNASL 169 (245)
T ss_dssp CSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSCHHH
T ss_pred CCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccCHHH
Confidence 99999999999999999888 7777 899999998543 2 356777788778999888765543
Q ss_pred cC-------Cc-eEEEeCCCCCHHHHHHHHHHhhhcC-Ce-EEcCcccchhHHHchHHHH
Q 024121 134 GE-------AA-TVMSLGGTATEEDGELIGKLFGSVG-KI-WRADEKLFDAITGLSGPAY 183 (272)
Q Consensus 134 ~~-------g~-~~~~~~~~~~~~~~~~v~~ll~~~G-~~-~~~~e~~~~~~~~~~~~~~ 183 (272)
.. +. .++++++ +++..+.++++|+.+| .. ++.++-.....+++..+.+
T Consensus 170 ~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~ 227 (245)
T 3dtt_A 170 MVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVW 227 (245)
T ss_dssp HHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHH
T ss_pred hcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHH
Confidence 22 22 3444553 6899999999999999 44 6777766566666554444
No 50
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.86 E-value=1.4e-19 Score=158.04 Aligned_cols=250 Identities=14% Similarity=0.129 Sum_probs=165.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC--------------ceeecCchhhhccCCE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG--------------VKVLSDNNAVVEYSDV 74 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g--------------~~~~~~~~~~~~~aDi 74 (272)
+.|||+|||+|+||++++..|.++|+ +|++| +|++++++.+.+.+ +..+.++.++++++|+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~----~V~l~-~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQ----KVRLW-SYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTC----CEEEE-CSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 35799999999999999999999999 99999 99999988887643 3456677888999999
Q ss_pred EEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCHH------HHHHHhCCCC-EEEEccCchhhhcCCce-E-EEeCCC
Q 024121 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLK------DLQEWTGHSR-FIRVMPNTPSAVGEAAT-V-MSLGGT 145 (272)
Q Consensus 75 vil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~------~l~~~~~~~~-~~~~~p~~~~~~~~g~~-~-~~~~~~ 145 (272)
||+|||++.++++++++.++++++++||++++|+..+ .+++.++..+ .+...|+....+..+.. . ...+
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~-- 180 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLAS-- 180 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEE--
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEec--
Confidence 9999999999999999999999999999999988764 5666666333 34567887776655542 2 2222
Q ss_pred CCHHHHHHHHHHhhhcCCeEEcCcccchh--------HHH----c----h--HHHHHHHHHHHHHH---HHHHcCCCHHH
Q 024121 146 ATEEDGELIGKLFGSVGKIWRADEKLFDA--------ITG----L----S--GPAYIFLAIEALAD---GGVAAGLPREL 204 (272)
Q Consensus 146 ~~~~~~~~v~~ll~~~G~~~~~~e~~~~~--------~~~----~----~--~~~~~~~~~~~l~~---~~~~~Gl~~~~ 204 (272)
.+++..+.++++|+..+..++.+++.... +.+ + . .+.....+..++.| .+.+.|.++++
T Consensus 181 ~~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t 260 (356)
T 3k96_A 181 NNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQET 260 (356)
T ss_dssp SCHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHh
Confidence 36888999999999888554444432110 111 1 1 23333334444444 46789999998
Q ss_pred HHHH------HHHHHHHHHHH-----HHhcCCCHHHHHHhc-CC-CcchHHHHHHHH-HhCCHHHHHHHHHHHHH
Q 024121 205 ALGL------ASQTVLGAASM-----VTKSGKHPGQLKDDV-AS-PGGTTIAGIHEL-EKSGFRGILMNAVVAAA 265 (272)
Q Consensus 205 a~~~------~~~~~~g~~~~-----~~~~~~~~~~l~~~~-~~-~~g~t~~~l~~l-~~~~~~~~~~~~~~~~~ 265 (272)
+..+ +..-....+++ ..-.+.+.+...+.. .. .|-.|...+..+ ++.+++..+.+++.+-+
T Consensus 261 ~~gl~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~v~~il 335 (356)
T 3k96_A 261 LTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRIL 335 (356)
T ss_dssp HTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred hcccchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 7643 21111100111 111244555444332 22 222344444444 66678777777766554
No 51
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.85 E-value=1e-19 Score=165.19 Aligned_cols=191 Identities=12% Similarity=0.122 Sum_probs=144.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cCceeecCchhhhc---cCCEEEEeeCcc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IGVKVLSDNNAVVE---YSDVVVFSVKPQ 82 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----~g~~~~~~~~~~~~---~aDivil~v~~~ 82 (272)
|||+|||+|.||++|+.+|.++|+ +|.+| +|++++.+.+.+ .|+..+.++.++++ ++|+||+|||+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~----~V~v~-dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~ 77 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF----VVCAF-NRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG 77 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCCh
Confidence 689999999999999999999999 99999 999999999887 67877788888764 899999999986
Q ss_pred -cHHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHHhC--CCCEEEEccC--chhhhcCCceEEEeCCCCCHHHHHHHH
Q 024121 83 -VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGELIG 155 (272)
Q Consensus 83 -~~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~~~~v~ 155 (272)
.++++++++.++++++++||+++++.+. ..+.+.+. +..++. +|. .+...+.|..++..+ +++..+.++
T Consensus 78 ~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~-~pv~g~~~~a~~g~~i~~gg---~~e~~~~v~ 153 (482)
T 2pgd_A 78 QAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVG-SGVSGGEDGARYGPSLMPGG---NKEAWPHIK 153 (482)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESHHHHHHHCCEEEEEE---CTTTHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeC-CCCCCChhhhccCCeEEeCC---CHHHHHHHH
Confidence 7999999999999899999998777654 34444443 334443 342 344445666555544 577889999
Q ss_pred HHhhhcCCe--------EEcCcccchhHHHchHHHHHHHHHHHHHHH---HHHc-CCCHHHHHHHHH
Q 024121 156 KLFGSVGKI--------WRADEKLFDAITGLSGPAYIFLAIEALADG---GVAA-GLPRELALGLAS 210 (272)
Q Consensus 156 ~ll~~~G~~--------~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~-Gl~~~~a~~~~~ 210 (272)
++|+.+|.. .++++.......++..+.+.+..+..+.|+ +++. |++++++.+++.
T Consensus 154 ~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~ 220 (482)
T 2pgd_A 154 AIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFE 220 (482)
T ss_dssp HHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 999999953 345555555555555444444445555554 6778 999999888875
No 52
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.85 E-value=9.7e-20 Score=164.70 Aligned_cols=190 Identities=16% Similarity=0.099 Sum_probs=144.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----------cC-------------ceeecC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----------IG-------------VKVLSD 64 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----------~g-------------~~~~~~ 64 (272)
+.+||+|||+|.||++||..|.++|+ +|++| ||++++++++.+ .| +..+.+
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~----~V~l~-D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGH----QVLLY-DISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTD 78 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC----eEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCC
Confidence 46799999999999999999999999 99999 999998877543 22 344556
Q ss_pred chhhhccCCEEEEeeCcc--cHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEE
Q 024121 65 NNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMS 141 (272)
Q Consensus 65 ~~~~~~~aDivil~v~~~--~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~ 141 (272)
. +.+++||+||+|||++ ..++++.++.+.+++++++++.++++++..+++.+. ..++++.||..|.... ....++
T Consensus 79 ~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~-~Lvevv 156 (483)
T 3mog_A 79 I-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVM-KLVEVV 156 (483)
T ss_dssp G-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTC-CEEEEE
T ss_pred H-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhC-CeEEEe
Confidence 5 4688999999999877 346888899888899999888889999988877665 3579999998877654 355667
Q ss_pred eCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 024121 142 LGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYI-FLAIEALADGGVAAGLPRELALGLASQ 211 (272)
Q Consensus 142 ~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~Gl~~~~a~~~~~~ 211 (272)
++..++++.++.+.++++.+|+. +++++.. + ...+.++ ..+.|++. .+.+.+.++++..+++..
T Consensus 157 ~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~-G----fi~Nr~l~~~~~Ea~~-l~~~g~~~~~~id~a~~~ 222 (483)
T 3mog_A 157 SGLATAAEVVEQLCELTLSWGKQPVRCHSTP-G----FIVNRVARPYYSEAWR-ALEEQVAAPEVIDAALRD 222 (483)
T ss_dssp ECSSCCHHHHHHHHHHHHHTTCEEEEEESCT-T----TTHHHHTHHHHHHHHH-HHHTTCSCHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhCCEEEEEeccC-c----chHHHHHHHHHHHHHH-HHHhCCCCHHHHHHHHHh
Confidence 78888999999999999999975 6665431 1 1122222 23334443 456677788887777664
No 53
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.84 E-value=5.7e-19 Score=157.74 Aligned_cols=191 Identities=13% Similarity=0.103 Sum_probs=144.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH--------HHHHcC-------------ceeecCch
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD--------AFESIG-------------VKVLSDNN 66 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~--------~l~~~g-------------~~~~~~~~ 66 (272)
+..+||+|||+|.||++||..|+++|+ +|++| |+++++.. ++.+.| +..+.+.+
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~----~V~l~-D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~ 126 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGI----ETFLV-VRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH 126 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC----eEEEE-ECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH
Confidence 456899999999999999999999999 99999 99998432 233333 34556664
Q ss_pred hhhccCCEEEEeeCcc--cHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEEeC
Q 024121 67 AVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLG 143 (272)
Q Consensus 67 ~~~~~aDivil~v~~~--~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~~~ 143 (272)
.+++||+||+|||.+ ...+++.++.+.++++++++|.++++++..+++.+. ..++++.||..|..... ...++++
T Consensus 127 -al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~-LvEIv~g 204 (460)
T 3k6j_A 127 -KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIR-LVEIIYG 204 (460)
T ss_dssp -GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCC-EEEEECC
T ss_pred -HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCC-EEEEEeC
Confidence 688999999999865 346788889999999999999889999988887765 35799999988876543 4456677
Q ss_pred CCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 024121 144 GTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADGGVAAGLPRELALGLAS 210 (272)
Q Consensus 144 ~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~ 210 (272)
..++++.++.+.++++.+|+. +++++. -+ + ++...+...+.|++. .+.+.|+++++..+++.
T Consensus 205 ~~Ts~e~~~~~~~l~~~lGk~~v~v~d~-pG-f--i~Nril~~~~~EA~~-l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 205 SHTSSQAIATAFQACESIKKLPVLVGNC-KS-F--VFNRLLHVYFDQSQK-LMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEESSC-CH-H--HHHHHHHHHHHHHHH-HHHTSCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEecc-cH-H--HHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHH
Confidence 778999999999999999976 666642 12 1 111222233445554 45689999999888875
No 54
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.84 E-value=2.7e-20 Score=160.32 Aligned_cols=153 Identities=14% Similarity=0.208 Sum_probs=115.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhC-----C-CCCCCcEEEEeCCCHHHHHHHHH-cCceeec-------------Cchhhhc
Q 024121 11 FILGFIGAGKMAESIAKGVAKS-----G-VLPPDRICTAVHSNLKRRDAFES-IGVKVLS-------------DNNAVVE 70 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~-----g-~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~-------------~~~~~~~ 70 (272)
|||+|||+|+||++++.+|.++ | + +|++| +| +++.+.+.+ .|+.+.. +..+.+.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~----~V~~~-~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLL----EVSWI-AR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVG 82 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSE----EEEEE-CC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCC----CEEEE-Ec-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccC
Confidence 6999999999999999999999 9 8 99999 99 888888888 7876543 3445678
Q ss_pred cCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCH-HHHHHHhCCCCEEEEccCchhh---------hcCCceEE
Q 024121 71 YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL-KDLQEWTGHSRFIRVMPNTPSA---------VGEAATVM 140 (272)
Q Consensus 71 ~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~-~~l~~~~~~~~~~~~~p~~~~~---------~~~g~~~~ 140 (272)
++|+||+|||++++.++++++.+.++++++||++++|+.. +.+++.++..++++.+++.+.. .+.|...+
T Consensus 83 ~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~~~ 162 (317)
T 2qyt_A 83 TVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRELFY 162 (317)
T ss_dssp CEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCceEE
Confidence 9999999999999999999999988888999999999987 5677777644555544433222 12333332
Q ss_pred EeC--CCCCHHHHHHHHHHhhhcCCeEEcCcc
Q 024121 141 SLG--GTATEEDGELIGKLFGSVGKIWRADEK 170 (272)
Q Consensus 141 ~~~--~~~~~~~~~~v~~ll~~~G~~~~~~e~ 170 (272)
+.. +..+.+.. .+.++|+..|..++..++
T Consensus 163 ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~d 193 (317)
T 2qyt_A 163 FGSGLPEQTDDEV-RLAELLTAAGIRAYNPTD 193 (317)
T ss_dssp EECCSSSCCHHHH-HHHHHHHHTTCCEECCSC
T ss_pred EcCCCCCCcCHHH-HHHHHHHHCCCCCEEchH
Confidence 322 22356667 899999999965444443
No 55
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.83 E-value=2.1e-19 Score=162.77 Aligned_cols=191 Identities=13% Similarity=0.142 Sum_probs=141.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-C-------ceeecCchhhhc---cCCEEEEee
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-G-------VKVLSDNNAVVE---YSDVVVFSV 79 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~-g-------~~~~~~~~~~~~---~aDivil~v 79 (272)
|||+|||+|.||++++.+|.++|+ +|.+| +|++++.+.+.+. | +..+.++.++++ ++|+||+||
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~----~V~v~-dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaV 76 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGF----KVAVF-NRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV 76 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEec
Confidence 689999999999999999999999 99999 9999999888763 6 666778888776 499999999
Q ss_pred Ccc-cHHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHHhC--CCCEEEEccC--chhhhcCCceEEEeCCCCCHHHHH
Q 024121 80 KPQ-VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGE 152 (272)
Q Consensus 80 ~~~-~~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~~~ 152 (272)
|+. .++++++++.+.++++++||+++++... ..+.+.++ +..++. +|. .|.....|..++..+ +++..+
T Consensus 77 p~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~-~pv~gg~~~a~~g~~i~~gg---~~~~~~ 152 (478)
T 1pgj_A 77 QAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG-MGISGGEEGARKGPAFFPGG---TLSVWE 152 (478)
T ss_dssp CCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE-EEEESHHHHHHHCCEEEEEE---CHHHHH
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEE-eeccCCHHHHhcCCeEeccC---CHHHHH
Confidence 985 7999999999999899999998877643 34555553 233433 232 233344555555443 688899
Q ss_pred HHHHHhhhcCCe--------EEcCcccchhHHHchHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHH
Q 024121 153 LIGKLFGSVGKI--------WRADEKLFDAITGLSGPAYIFLAIEALADG---GVAAGLPRELALGLAS 210 (272)
Q Consensus 153 ~v~~ll~~~G~~--------~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~Gl~~~~a~~~~~ 210 (272)
.++++|+.+|.. .++++.......++..+.+.+..+..+.|+ +.+.|++++++.+++.
T Consensus 153 ~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 153 EIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp HHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 999999999943 456666555555555333433334444443 5689999999888876
No 56
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.83 E-value=8.2e-20 Score=148.45 Aligned_cols=166 Identities=17% Similarity=0.230 Sum_probs=129.9
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-C-------ceeecCchhhhccCCEEEEeeCc
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-G-------VKVLSDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~-g-------~~~~~~~~~~~~~aDivil~v~~ 81 (272)
|||+||| +|.||++++..|.+.|+ +|++| +|++++.+.+.+. + +. ..+..++++++|+||+|+|+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH----EIVVG-SRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC----EEEEE-ESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCCh
Confidence 6899999 99999999999999999 99999 9999888776652 3 33 35666778899999999999
Q ss_pred ccHHHHHHHhchhcCCCCEEEEEcCCCC--------------HHHHHHHhCCCCEEEEccCchhhhcCC------ceEEE
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSVAAGVK--------------LKDLQEWTGHSRFIRVMPNTPSAVGEA------ATVMS 141 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~~~~~~--------------~~~l~~~~~~~~~~~~~p~~~~~~~~g------~~~~~ 141 (272)
+.+++++.++.+.+ ++++++++++|++ .+.+++.+++.++++.||+.+.....+ .+.++
T Consensus 75 ~~~~~~~~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (212)
T 1jay_A 75 EHAIDTARDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPV 153 (212)
T ss_dssp HHHHHHHHHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTCCCCEEEEE
T ss_pred hhHHHHHHHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCCeEEEEccchHHHHhhCcCCCCCccEEE
Confidence 99999998888777 5889999988776 577888887678999987766544332 45566
Q ss_pred eCCCCCHHHHHHHHHHhhhc-CCe-EEcCcccchhHHHchHHHHHH
Q 024121 142 LGGTATEEDGELIGKLFGSV-GKI-WRADEKLFDAITGLSGPAYIF 185 (272)
Q Consensus 142 ~~~~~~~~~~~~v~~ll~~~-G~~-~~~~e~~~~~~~~~~~~~~~~ 185 (272)
+++ +++..+.++++|+.+ |.. +++++.......+.++|.|+.
T Consensus 154 ~g~--~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~~~~ 197 (212)
T 1jay_A 154 CGD--DDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLILN 197 (212)
T ss_dssp EES--CHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTHHHHHHH
T ss_pred ECC--cHHHHHHHHHHHHHcCCCCceeccchhHHHHhcchHHHHHH
Confidence 654 588899999999999 965 677764434444444666654
No 57
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.83 E-value=1.5e-18 Score=152.40 Aligned_cols=154 Identities=11% Similarity=0.121 Sum_probs=117.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC--------------ceeecCchhhhccC
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG--------------VKVLSDNNAVVEYS 72 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g--------------~~~~~~~~~~~~~a 72 (272)
+|++|||+|||+|+||++|+.+|.++|+ +|++| +|++++.+.+.+.+ +..+.++.++++++
T Consensus 12 ~m~M~kI~iIG~G~mG~~la~~L~~~G~----~V~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 86 (366)
T 1evy_A 12 LLYLNKAVVFGSGAFGTALAMVLSKKCR----EVCVW-HMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGA 86 (366)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTTEE----EEEEE-CSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTC
T ss_pred hhccCeEEEECCCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCC
Confidence 3333499999999999999999999999 99999 99999988887632 45556777888899
Q ss_pred CEEEEeeCcccHHHHHHH----hchhcCC-CCEEEEEcCCCCHH---HHHHH----hCCC-CEEEEccCchhhhcCCce-
Q 024121 73 DVVVFSVKPQVVKDVAMQ----IRPLLSR-KKLLVSVAAGVKLK---DLQEW----TGHS-RFIRVMPNTPSAVGEAAT- 138 (272)
Q Consensus 73 Divil~v~~~~~~~v~~~----l~~~l~~-~~~iis~~~~~~~~---~l~~~----~~~~-~~~~~~p~~~~~~~~g~~- 138 (272)
|+||+|||++++.+++.+ +.+++++ +++||++++|+..+ .+.+. ++.. ..++..|+.+.....+..
T Consensus 87 DvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~g~~~ 166 (366)
T 1evy_A 87 EIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFT 166 (366)
T ss_dssp SSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHTTCCE
T ss_pred CEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHhCCce
Confidence 999999999999999998 9888888 89999998887653 22232 2311 246677888776655542
Q ss_pred EEEeCCCCCHHHHHHHHHHhhhc--CCeEE
Q 024121 139 VMSLGGTATEEDGELIGKLFGSV--GKIWR 166 (272)
Q Consensus 139 ~~~~~~~~~~~~~~~v~~ll~~~--G~~~~ 166 (272)
.+..+ ..+++..+.++++|+.. |..++
T Consensus 167 ~~~~~-~~~~~~~~~v~~ll~~~g~g~~~~ 195 (366)
T 1evy_A 167 CVSIA-SADINVARRLQRIMSTGDRSFVCW 195 (366)
T ss_dssp EEEEE-CSSHHHHHHHHHHHSCTTSSEEEE
T ss_pred EEEEe-cCCHHHHHHHHHHhcCCCCeEEEE
Confidence 22222 23678889999999999 64433
No 58
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.81 E-value=2.9e-18 Score=149.97 Aligned_cols=152 Identities=19% Similarity=0.228 Sum_probs=117.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCC-------CCCCCcEEEEeCCCHH-----HHHHHHHc--------------Cceee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSG-------VLPPDRICTAVHSNLK-----RRDAFESI--------------GVKVL 62 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g-------~~~~~~V~v~~~r~~~-----~~~~l~~~--------------g~~~~ 62 (272)
..|||+|||+|+||++++..|.++| + +|++| +|+++ +.+.+.+. ++..+
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~----~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDP----RVTMW-VFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAV 81 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEE----EEEEE-CCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCC----eEEEE-EcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEE
Confidence 4579999999999999999999998 8 99999 99988 77776642 23455
Q ss_pred cCchhhhccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCH---------HHHHHHhCCCCEEEEccCchhhh
Q 024121 63 SDNNAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL---------KDLQEWTGHSRFIRVMPNTPSAV 133 (272)
Q Consensus 63 ~~~~~~~~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~---------~~l~~~~~~~~~~~~~p~~~~~~ 133 (272)
.++.++++++|+||+|||+++++++++++.++++++++||++++|+.. +.+.+.++....++..|+.+..+
T Consensus 82 ~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~~v 161 (354)
T 1x0v_A 82 PDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIPMSVLMGANIASEV 161 (354)
T ss_dssp SSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCCEEEEECSCCHHHH
T ss_pred cCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCCEEEEECCCcHHHH
Confidence 677788899999999999999999999999999899999999888762 22344444223467789888776
Q ss_pred cCCc-eEEEeCCCCCHHHHHHHHHHhhhcCCeEE
Q 024121 134 GEAA-TVMSLGGTATEEDGELIGKLFGSVGKIWR 166 (272)
Q Consensus 134 ~~g~-~~~~~~~~~~~~~~~~v~~ll~~~G~~~~ 166 (272)
..+. ..++.+ ..+++..+.++++|+..|..++
T Consensus 162 ~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~ 194 (354)
T 1x0v_A 162 ADEKFCETTIG-CKDPAQGQLLKELMQTPNFRIT 194 (354)
T ss_dssp HTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEE
T ss_pred HhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEE
Confidence 6664 233322 2367888999999999985533
No 59
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.81 E-value=2.3e-18 Score=151.74 Aligned_cols=151 Identities=15% Similarity=0.157 Sum_probs=116.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-------CCCCCcEEEEeCCCHH-----HHHHHHHc--------------Cceeec
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSG-------VLPPDRICTAVHSNLK-----RRDAFESI--------------GVKVLS 63 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g-------~~~~~~V~v~~~r~~~-----~~~~l~~~--------------g~~~~~ 63 (272)
+|||+|||+|+||++|+..|.++| + +|++| +|+++ +.+.+.+. ++..+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~----~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 95 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFEN----EVRMW-IRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHS 95 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCS----CEEEE-CCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCC----eEEEE-ECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEEC
Confidence 468999999999999999999999 8 99999 99988 77777652 345666
Q ss_pred CchhhhccCCEEEEeeCcccHHHHHHHhch----hcCCCCEEEEEcCCCCH-----HHH----HHHhCCCCEEEEccCch
Q 024121 64 DNNAVVEYSDVVVFSVKPQVVKDVAMQIRP----LLSRKKLLVSVAAGVKL-----KDL----QEWTGHSRFIRVMPNTP 130 (272)
Q Consensus 64 ~~~~~~~~aDivil~v~~~~~~~v~~~l~~----~l~~~~~iis~~~~~~~-----~~l----~~~~~~~~~~~~~p~~~ 130 (272)
++.++++++|+||+|||++++++++.++.+ .++++++||++++|++. +.+ .+.++....++..|+.+
T Consensus 96 ~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a 175 (375)
T 1yj8_A 96 DLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIPCSALSGANIA 175 (375)
T ss_dssp STHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSCEEEEECSCCH
T ss_pred CHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCCEEEEeCCchH
Confidence 777888999999999999999999999998 88899999999888764 222 33333113456778887
Q ss_pred hhhcCCceE-EEeCCCCCHHHHHHHHHHhhhcCCeEE
Q 024121 131 SAVGEAATV-MSLGGTATEEDGELIGKLFGSVGKIWR 166 (272)
Q Consensus 131 ~~~~~g~~~-~~~~~~~~~~~~~~v~~ll~~~G~~~~ 166 (272)
..+..+... +..+ ..+++..+.++++|+..|..++
T Consensus 176 ~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~ 211 (375)
T 1yj8_A 176 MDVAMENFSEATIG-GNDKDSLVIWQRVFDLPYFKIN 211 (375)
T ss_dssp HHHHTTCCEEEEEE-CSCHHHHHHHHHHHCBTTEEEE
T ss_pred HHHHhCCCeEEEEe-cCCHHHHHHHHHHhCCCCeEEE
Confidence 766655432 2222 2367888999999999885433
No 60
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.81 E-value=1.6e-19 Score=153.52 Aligned_cols=151 Identities=13% Similarity=0.145 Sum_probs=110.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc---Cc----eeecCchhhhccCCEEEEeeCccc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI---GV----KVLSDNNAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~---g~----~~~~~~~~~~~~aDivil~v~~~~ 83 (272)
|||+|||+|+||++++..|.++|+ +|++| +|++++.+.+... |. .+..+..+.++++|+||+|||+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~ 75 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGH----EVQGW-LRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQ 75 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC----CEEEE-EcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHh
Confidence 689999999999999999999999 99999 9998765544332 21 122233566789999999999999
Q ss_pred HHHHHHHhchhcCCCCEEEEEcCCCCH-HHHHHHhCC----C---CEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHH
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAAGVKL-KDLQEWTGH----S---RFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIG 155 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~~~~~-~~l~~~~~~----~---~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~ 155 (272)
++++++++.++++++++|+++++|+.. +.+++.++. . ...+..| .+...+.|.+.+.+.. .+++..+.++
T Consensus 76 ~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~~~i~~~~-~~~~~~~~~~ 153 (291)
T 1ks9_A 76 VSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGN-VIIHVANGITHIGPAR-QQDGDYSYLA 153 (291)
T ss_dssp HHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCSCEEEEEECCEEEEETT-EEEEEECCCEEEEESS-GGGTTCTHHH
T ss_pred HHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcCCeEEEEEeEccEEcCC-EEEEecccceEEccCC-CCcchHHHHH
Confidence 999999999999889999999998866 456665552 0 0123344 3444556665555422 2456778999
Q ss_pred HHhhhcCCe-EEcC
Q 024121 156 KLFGSVGKI-WRAD 168 (272)
Q Consensus 156 ~ll~~~G~~-~~~~ 168 (272)
++|+.+|.. ++.+
T Consensus 154 ~ll~~~g~~~~~~~ 167 (291)
T 1ks9_A 154 DILQTVLPDVAWHN 167 (291)
T ss_dssp HHHHTTSSCEEECT
T ss_pred HHHHhcCCCCeecH
Confidence 999999965 4443
No 61
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.81 E-value=3.5e-18 Score=161.55 Aligned_cols=189 Identities=14% Similarity=0.036 Sum_probs=141.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHH-----------HHcC-------------ceeec
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAF-----------ESIG-------------VKVLS 63 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l-----------~~~g-------------~~~~~ 63 (272)
...+||+|||+|.||++||..|.++|+ +|++| |+++++++.. .+.| +..+.
T Consensus 312 ~~i~kV~VIGaG~MG~~iA~~la~aG~----~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 386 (715)
T 1wdk_A 312 KDVKQAAVLGAGIMGGGIAYQSASKGT----PILMK-DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTL 386 (715)
T ss_dssp CCCSSEEEECCHHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEES
T ss_pred ccCCEEEEECCChhhHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEEC
Confidence 457899999999999999999999999 99999 9999877653 2233 34556
Q ss_pred CchhhhccCCEEEEeeCccc--HHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEE
Q 024121 64 DNNAVVEYSDVVVFSVKPQV--VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVM 140 (272)
Q Consensus 64 ~~~~~~~~aDivil~v~~~~--~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~ 140 (272)
+. +.+++||+||+|||.+. .++++.++.++++++++++|.++++++..+.+.+. ..++++.|+..|..... ...+
T Consensus 387 d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~-lvev 464 (715)
T 1wdk_A 387 SY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP-LVEV 464 (715)
T ss_dssp SS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCC-EEEE
T ss_pred CH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCc-eEEE
Confidence 66 67899999999998653 46788888888889999988888999988887665 25789999887776443 3445
Q ss_pred EeCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 024121 141 SLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADGGVAAGLPRELALGLA 209 (272)
Q Consensus 141 ~~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~ 209 (272)
+.+..++++.++.+.++++.+|+. +++++. .+. ++...+...+.|++. .+. .|+++++..+++
T Consensus 465 v~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf---i~Nril~~~~~Ea~~-l~~-~G~~~~~id~~~ 528 (715)
T 1wdk_A 465 IRGEKSSDLAVATTVAYAKKMGKNPIVVNDC-PGF---LVNRVLFPYFGGFAK-LVS-AGVDFVRIDKVM 528 (715)
T ss_dssp EECSSCCHHHHHHHHHHHHHTTCEEEEEESC-TTT---THHHHHHHHHHHHHH-HHH-TTCCHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhCCEeEEEcCC-CCh---hhhHHHHHHHHHHHH-HHH-CCCCHHHHHHHH
Confidence 667778999999999999999975 666543 111 112222233444433 333 599999887777
No 62
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.81 E-value=2.2e-18 Score=148.25 Aligned_cols=154 Identities=19% Similarity=0.247 Sum_probs=115.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee--------------ecCchhhhccCCEE
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV--------------LSDNNAVVEYSDVV 75 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~--------------~~~~~~~~~~aDiv 75 (272)
.|||+|||+|+||++++..|.++|+ +|++| +|++ .+.+.+.|+.+ +.+. +.+.++|+|
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~----~V~~~-~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~v 73 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGE----DVHFL-LRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDLV 73 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSC----CEEEE-CSTT--HHHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC----eEEEE-EcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCEE
Confidence 3799999999999999999999999 99999 9986 36666655432 2233 446789999
Q ss_pred EEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCC-HHHHHHHhCCCCEEEEc---------cCchhhhcCCceEEEeCCC
Q 024121 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK-LKDLQEWTGHSRFIRVM---------PNTPSAVGEAATVMSLGGT 145 (272)
Q Consensus 76 il~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~-~~~l~~~~~~~~~~~~~---------p~~~~~~~~g~~~~~~~~~ 145 (272)
|+|||+++++++++++.+++.++++||++.+|+. .+.+++.++..++++.+ |+.....+.+.+.+...++
T Consensus 74 ilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~ 153 (312)
T 3hn2_A 74 LVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLP 153 (312)
T ss_dssp EECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSC
T ss_pred EEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCC
Confidence 9999999999999999999999999999999997 46788888755666544 3333333334444433333
Q ss_pred CCHHHHHHHHHHhhhcCCeEEcCccc
Q 024121 146 ATEEDGELIGKLFGSVGKIWRADEKL 171 (272)
Q Consensus 146 ~~~~~~~~v~~ll~~~G~~~~~~e~~ 171 (272)
.+.+..+.+.++|+..|...+.+++.
T Consensus 154 ~~~~~~~~l~~~l~~~g~~~~~~~di 179 (312)
T 3hn2_A 154 RDTGRIEELAAMFRQAGVDCRTTDDL 179 (312)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEECSCH
T ss_pred CccHHHHHHHHHHHhCCCCcEEChHH
Confidence 34667788999999988655556553
No 63
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.69 E-value=2.1e-21 Score=156.44 Aligned_cols=152 Identities=14% Similarity=0.216 Sum_probs=120.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v 87 (272)
.+.|||+|||+|+||++++++|.+.|+ +|++| +|+++ .+.+...|+... +..++++++|+||+|||+++++++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~----~V~~~-~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~~~~~v 89 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGY----SVVFG-SRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHREHYDFL 89 (201)
Confidence 345799999999999999999999998 99999 99987 555555676665 677888899999999999888888
Q ss_pred HHHhchhcCCCCEEEEEcCCCC--------HHHHHHHhCCCCEEEEccCchhhhcC-Cc-----eEEEeCCCCCHHHHHH
Q 024121 88 AMQIRPLLSRKKLLVSVAAGVK--------LKDLQEWTGHSRFIRVMPNTPSAVGE-AA-----TVMSLGGTATEEDGEL 153 (272)
Q Consensus 88 ~~~l~~~l~~~~~iis~~~~~~--------~~~l~~~~~~~~~~~~~p~~~~~~~~-g~-----~~~~~~~~~~~~~~~~ 153 (272)
+ ++.+. .++++||++++|++ .+.+++.+++.++++.+|+.|..... |. ..++.+. +++.++.
T Consensus 90 ~-~l~~~-~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~--~~~~~~~ 165 (201)
T 2yjz_A 90 A-ELADS-LKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAHVVKAFNTISAWALQSGTLDASRQVFVCGN--DSKAKDR 165 (201)
Confidence 7 55543 47889999999986 36677777767899999999887654 44 1344443 5778899
Q ss_pred HHHHhhhcCCe-EEcCcc
Q 024121 154 IGKLFGSVGKI-WRADEK 170 (272)
Q Consensus 154 v~~ll~~~G~~-~~~~e~ 170 (272)
++++|+.+|.. +++++-
T Consensus 166 v~~ll~~~G~~~~~~G~l 183 (201)
T 2yjz_A 166 VMDIARTLGLTPLDQGSL 183 (201)
Confidence 99999999954 666654
No 64
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.80 E-value=1e-17 Score=145.20 Aligned_cols=149 Identities=15% Similarity=0.199 Sum_probs=117.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHHcCc-----------eeec--CchhhhccCCEE
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFESIGV-----------KVLS--DNNAVVEYSDVV 75 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r--~~~~~~~l~~~g~-----------~~~~--~~~~~~~~aDiv 75 (272)
|||+|||+|+||++++..|.++|+ +|++| +| ++++.+.+.+.+. .+.. ++.++++++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~v 75 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGN----EVRIW-GTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVV 75 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCC----EEEEE-CCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC----eEEEE-EccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEE
Confidence 689999999999999999999999 99999 99 9998888877553 4444 566778899999
Q ss_pred EEeeCcccHHHHHHHhchhcCCCCEEEEEcCCC------CHHHHHHHhCC-----C-CEEEEccCchhhhcCCc-eEEEe
Q 024121 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV------KLKDLQEWTGH-----S-RFIRVMPNTPSAVGEAA-TVMSL 142 (272)
Q Consensus 76 il~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~------~~~~l~~~~~~-----~-~~~~~~p~~~~~~~~g~-~~~~~ 142 (272)
|+|||++++.+++.++.+ ++++++||++++|+ ..+.+++.++. . ..++..|+.+...+.+. +.++.
T Consensus 76 i~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~g~~~~~~~ 154 (335)
T 1txg_A 76 LLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREVAKRMPTTVVF 154 (335)
T ss_dssp EECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHHHTTCCEEEEE
T ss_pred EEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHHHccCCcEEEE
Confidence 999999999999999999 88899999998888 33566666542 1 24566788777665554 33333
Q ss_pred CCCCCHHHHHHHHHHhhhcCCeEE
Q 024121 143 GGTATEEDGELIGKLFGSVGKIWR 166 (272)
Q Consensus 143 ~~~~~~~~~~~v~~ll~~~G~~~~ 166 (272)
+. .+++..+.++++|+..|..++
T Consensus 155 ~~-~~~~~~~~~~~ll~~~g~~~~ 177 (335)
T 1txg_A 155 SS-PSESSANKMKEIFETEYFGVE 177 (335)
T ss_dssp EC-SCHHHHHHHHHHHCBTTEEEE
T ss_pred Ee-CCHHHHHHHHHHhCCCcEEEE
Confidence 32 367888999999999885533
No 65
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.78 E-value=2e-18 Score=140.73 Aligned_cols=137 Identities=12% Similarity=0.179 Sum_probs=110.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
..|||+|||+|+||++|+.+|.++|+ +|++| +|. ++ +.++| |+|||++.+.+++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~----~V~~~-~~~------------------~~-~~~aD--ilavP~~ai~~vl 58 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGH----YVTVL-HAP------------------ED-IRDFE--LVVIDAHGVEGYV 58 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTC----EEEEC-SSG------------------GG-GGGCS--EEEECSSCHHHHH
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCC----EEEEe-cCH------------------HH-hccCC--EEEEcHHHHHHHH
Confidence 45799999999999999999999999 99999 872 22 56789 9999999999999
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCC-eEE
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGK-IWR 166 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~-~~~ 166 (272)
.++.++++++++|+|++++.+.+.++...+ +..++..||... ....+..+ +++..+.++++++.+|. .++
T Consensus 59 ~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g-----~~~~i~a~---d~~a~~~l~~L~~~lG~~vv~ 130 (232)
T 3dfu_A 59 EKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQ-----DRWVASAL---DELGETIVGLLVGELGGSIVE 130 (232)
T ss_dssp HHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEET-----TEEEEEES---SHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCC-----CceeeeCC---CHHHHHHHHHHHHHhCCEEEE
Confidence 999998999999999877777666555433 467788887631 23444443 67789999999999995 478
Q ss_pred cCcccchhHHHch
Q 024121 167 ADEKLFDAITGLS 179 (272)
Q Consensus 167 ~~e~~~~~~~~~~ 179 (272)
+++++++.+.+.+
T Consensus 131 ~~~~~hd~~~AAv 143 (232)
T 3dfu_A 131 IADDKRAQLAAAL 143 (232)
T ss_dssp CCGGGHHHHHHHH
T ss_pred eCHHHHhHHHHHH
Confidence 9999888886654
No 66
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.78 E-value=2.8e-17 Score=155.44 Aligned_cols=189 Identities=14% Similarity=0.058 Sum_probs=138.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----------cC-------------ceeec
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----------IG-------------VKVLS 63 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----------~g-------------~~~~~ 63 (272)
..++||+|||+|.||++||..|.++|+ +|++| |++++++++..+ .| +..+.
T Consensus 310 ~~~~kV~VIGaG~MG~~iA~~la~aG~----~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 384 (725)
T 2wtb_A 310 RKIKKVAIIGGGLMGSGIATALILSNY----PVILK-EVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSL 384 (725)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHTTTC----CEEEE-CSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEES
T ss_pred ccCcEEEEEcCCHhhHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeC
Confidence 356789999999999999999999999 99999 999987765421 12 34555
Q ss_pred CchhhhccCCEEEEeeCccc--HHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEE
Q 024121 64 DNNAVVEYSDVVVFSVKPQV--VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVM 140 (272)
Q Consensus 64 ~~~~~~~~aDivil~v~~~~--~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~ 140 (272)
+. +.+++||+||+|||.+. .++++.++.+++++++++++.++++++..+.+.+. ..++++.|+..|..... ...+
T Consensus 385 d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~-lvev 462 (725)
T 2wtb_A 385 DY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMP-LLEI 462 (725)
T ss_dssp SS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCC-EEEE
T ss_pred CH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCc-eEEE
Confidence 66 56899999999998764 46777888888889998888888999888877654 25788888766654332 4456
Q ss_pred EeCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 024121 141 SLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADGGVAAGLPRELALGLA 209 (272)
Q Consensus 141 ~~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~ 209 (272)
++++.++++.++.+.++++.+|+. +++++. .+. +....+...+.|++. .+. .|+++++..+++
T Consensus 463 v~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf---i~Nril~~~~~Ea~~-l~~-~G~~~e~id~~~ 526 (725)
T 2wtb_A 463 VRTNHTSAQVIVDLLDVGKKIKKTPVVVGNC-TGF---AVNRMFFPYTQAAMF-LVE-CGADPYLIDRAI 526 (725)
T ss_dssp EECSSCCHHHHHHHHHHHHHTTCEEEEEESS-TTT---THHHHHHHHHHHHHH-HHH-TTCCHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhCCEEEEECCC-ccH---HHHHHHHHHHHHHHH-HHH-CCCCHHHHHHHH
Confidence 677778999999999999999975 666543 111 112222233444533 334 499999888877
No 67
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.78 E-value=3.3e-17 Score=147.85 Aligned_cols=190 Identities=18% Similarity=0.182 Sum_probs=138.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----------cC-----------ceeecC
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----------IG-----------VKVLSD 64 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----------~g-----------~~~~~~ 64 (272)
++..+||+|||+|.||.+||..|.++|+ +|++| |+++++++.+.+ .| ..++.+
T Consensus 34 ~~~~~kV~VIGaG~MG~~iA~~la~~G~----~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~ 108 (463)
T 1zcj_A 34 AQPVSSVGVLGLGTMGRGIAISFARVGI----SVVAV-ESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSS 108 (463)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESC
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCC
Confidence 3456899999999999999999999999 99999 999987665432 11 234455
Q ss_pred chhhhccCCEEEEeeCccc--HHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEE
Q 024121 65 NNAVVEYSDVVVFSVKPQV--VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMS 141 (272)
Q Consensus 65 ~~~~~~~aDivil~v~~~~--~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~ 141 (272)
. +.+++||+||+|||.+. ..+++.++.++++++++|++.+++++...+++.+. ..++++.|+..|.... ....++
T Consensus 109 ~-~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~~~~~~~~~ig~hf~~P~~~~-~lvevv 186 (463)
T 1zcj_A 109 T-KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVM-RLLEVI 186 (463)
T ss_dssp G-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTC-CEEEEE
T ss_pred H-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHHHhcCCcceEEeecCCCcccc-eeEEEe
Confidence 5 56889999999998753 46788888888889999998778888888877665 2568888887665533 344566
Q ss_pred eCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHH
Q 024121 142 LGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYI-FLAIEALADGGVAAGLPRELALGLAS 210 (272)
Q Consensus 142 ~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~Gl~~~~a~~~~~ 210 (272)
.+...+++.++.++++++.+|+. +++++. .+. + .+.++ ..+.+++. . ...|+++++..+++.
T Consensus 187 ~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~-~gf---i-~Nrll~~~~~ea~~-l-~~~G~~~~~id~~~~ 250 (463)
T 1zcj_A 187 PSRYSSPTTIATVMSLSKKIGKIGVVVGNC-YGF---V-GNRMLAPYYNQGFF-L-LEEGSKPEDVDGVLE 250 (463)
T ss_dssp ECSSCCHHHHHHHHHHHHHTTCEEEEBCCS-TTT---T-HHHHHHHHHHHHHH-H-HHTTCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCEEEEECCC-ccH---H-HHHHHHHHHHHHHH-H-HHcCCCHHHHHHHHH
Confidence 77778999999999999999975 666642 111 1 12221 12234432 2 345889888777765
No 68
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.77 E-value=8.3e-18 Score=136.98 Aligned_cols=152 Identities=18% Similarity=0.237 Sum_probs=114.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
++|||+|||+|.||++++..|.+.|+ +|++| +|++++.+.+.+.|+... +..++++++|+||+|+|++++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~----~V~~~-~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~~~~~~v~ 100 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGF----KVVVG-SRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFREHYSSLC 100 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCGGGSGGGG
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCChHHHHHHH
Confidence 56899999999999999999999999 99999 999998888777777765 6778889999999999988877777
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHHHH----------HHhCCCCEEEEccCchhh-hc----CCc-eEEEeCCCCCHHHHH
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKDLQ----------EWTGHSRFIRVMPNTPSA-VG----EAA-TVMSLGGTATEEDGE 152 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~l~----------~~~~~~~~~~~~p~~~~~-~~----~g~-~~~~~~~~~~~~~~~ 152 (272)
+ +.+.+ +++++++++++.+.+.++ +.+++.++++.+...... .. .+. ..++.+ .+++..+
T Consensus 101 ~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g--~~~~~~~ 176 (215)
T 2vns_A 101 S-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICG--DQPEAKR 176 (215)
T ss_dssp G-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTTBCHHHHHTCSCSSCCEEEEEE--SCHHHHH
T ss_pred H-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEeccccccHhHhcccccCCceeEEEec--CCHHHHH
Confidence 5 66666 889999999988765443 555655788776221111 01 122 233333 2788999
Q ss_pred HHHHHhhhcCCe-EEcCcc
Q 024121 153 LIGKLFGSVGKI-WRADEK 170 (272)
Q Consensus 153 ~v~~ll~~~G~~-~~~~e~ 170 (272)
.++++|+.+|.. +++++.
T Consensus 177 ~v~~ll~~~G~~~~~~g~~ 195 (215)
T 2vns_A 177 AVSEMALAMGFMPVDMGSL 195 (215)
T ss_dssp HHHHHHHHTTCEEEECCSG
T ss_pred HHHHHHHHcCCceEeecch
Confidence 999999999965 777764
No 69
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.76 E-value=4.8e-17 Score=144.36 Aligned_cols=192 Identities=13% Similarity=0.166 Sum_probs=132.0
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc------------------CceeecCc
Q 024121 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI------------------GVKVLSDN 65 (272)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~------------------g~~~~~~~ 65 (272)
+.+.+++|||+|||+|.||.++|..|.+ |+ +|++| ||++++++.+.+. ++..+.++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~----~V~~~-D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~ 103 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NH----EVVAL-DIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDK 103 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TS----EEEEE-CSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CC----eEEEE-ecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCH
Confidence 4556667899999999999999999988 99 99999 9999998877651 45667787
Q ss_pred hhhhccCCEEEEeeCcc-----------cHHHHHHHhchhcCCCCEEEEEcCCCCH---HHHHHHhCCCCEEEEccCchh
Q 024121 66 NAVVEYSDVVVFSVKPQ-----------VVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTGHSRFIRVMPNTPS 131 (272)
Q Consensus 66 ~~~~~~aDivil~v~~~-----------~~~~v~~~l~~~l~~~~~iis~~~~~~~---~~l~~~~~~~~~~~~~p~~~~ 131 (272)
.+++++||+||+|||.. .++++++++.+ ++++++||.. +++++ +.+.+.+... .+..-|.
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~-STv~pgtt~~l~~~l~~~-~v~~sPe--- 177 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIK-STIPVGFTRDIKERLGID-NVIFSPE--- 177 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEEC-SCCCTTHHHHHHHHHTCC-CEEECCC---
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEe-CCCChHHHHHHHHHHhhc-cEeecCc---
Confidence 88899999999999864 47888888888 8999999864 45554 4555555532 2333332
Q ss_pred hhcCCc---------eEEEeCCCCCHHHHHHHHHHhhh--cCC--eEEcCcccchhHHHchHHHHHHHHH---HHHHHHH
Q 024121 132 AVGEAA---------TVMSLGGTATEEDGELIGKLFGS--VGK--IWRADEKLFDAITGLSGPAYIFLAI---EALADGG 195 (272)
Q Consensus 132 ~~~~g~---------~~~~~~~~~~~~~~~~v~~ll~~--~G~--~~~~~e~~~~~~~~~~~~~~~~~~~---~~l~~~~ 195 (272)
..+.|. .++..+ +++..+.+.++|.. ++. .++.++......+++..+.|...-+ ..+...+
T Consensus 178 ~~~~G~A~~~~l~p~rIvvG~---~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 178 FLREGRALYDNLHPSRIVIGE---RSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CCCTTSHHHHHHSCSCEEESS---CSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcchhhhcccCCceEEecC---CHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222221 344433 56778889999986 542 3454555556666766444444333 3333357
Q ss_pred HHcCCCHHHHHHHHH
Q 024121 196 VAAGLPRELALGLAS 210 (272)
Q Consensus 196 ~~~Gl~~~~a~~~~~ 210 (272)
++.|+|.++..+.+.
T Consensus 255 e~~GiD~~~v~~~~~ 269 (432)
T 3pid_A 255 ESQGLNSKQIIEGVC 269 (432)
T ss_dssp HHTTCCHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHc
Confidence 899999998887764
No 70
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.76 E-value=7.8e-17 Score=144.74 Aligned_cols=189 Identities=16% Similarity=0.137 Sum_probs=133.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-------------------c-CceeecCchhhhc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-------------------I-GVKVLSDNNAVVE 70 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-------------------~-g~~~~~~~~~~~~ 70 (272)
|||+|||+|.||.++|..|.++|+ +|++| ||++++++.+.+ . ++..+.++.++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~----~V~~~-D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~ 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA----NVRCI-DTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVP 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGG
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC----EEEEE-ECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHh
Confidence 799999999999999999999999 99999 999999888765 1 2456677888899
Q ss_pred cCCEEEEeeCcc----------cHHHHHHHhchhcCCCCEEEEEcCCCCH---HHHHHHhC----C----CC-EEEEccC
Q 024121 71 YSDVVVFSVKPQ----------VVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTG----H----SR-FIRVMPN 128 (272)
Q Consensus 71 ~aDivil~v~~~----------~~~~v~~~l~~~l~~~~~iis~~~~~~~---~~l~~~~~----~----~~-~~~~~p~ 128 (272)
++|+||+|||.. .++++++++.++++++++||+.+ +++. +.+.+.+. . .. .+..-|.
T Consensus 78 ~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe 156 (450)
T 3gg2_A 78 EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIASNPE 156 (450)
T ss_dssp GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCC
T ss_pred cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEEechh
Confidence 999999999866 78999999999999999998765 4543 23333221 0 11 1222232
Q ss_pred chhhhcCCc---------eEEEeCCCCCHHHHHHHHHHhhhcCC---eEEcCcccchhHHHchHHHHHHHHHHHH---HH
Q 024121 129 TPSAVGEAA---------TVMSLGGTATEEDGELIGKLFGSVGK---IWRADEKLFDAITGLSGPAYIFLAIEAL---AD 193 (272)
Q Consensus 129 ~~~~~~~g~---------~~~~~~~~~~~~~~~~v~~ll~~~G~---~~~~~e~~~~~~~~~~~~~~~~~~~~~l---~~ 193 (272)
....|. .++..+. +++..+.++++++.+++ .++.++......+++..+.+....+..+ ..
T Consensus 157 ---~a~eG~~~~~~~~p~~ivvG~~--~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 157 ---FLKEGNAIDDFMKPDRVVVGVD--SDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp ---CCCTTSHHHHHHSCSCEEEEES--SHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hhcccchhhhccCCCEEEEEcC--CHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222 2444332 57889999999999985 3555554445556665444444333333 33
Q ss_pred HHHHcCCCHHHHHHHHH
Q 024121 194 GGVAAGLPRELALGLAS 210 (272)
Q Consensus 194 ~~~~~Gl~~~~a~~~~~ 210 (272)
.+.+.|+|.++..+++.
T Consensus 232 l~~~~Gid~~~v~~~~~ 248 (450)
T 3gg2_A 232 LCERVGADVSMVRLGIG 248 (450)
T ss_dssp HHHHHTCCHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHc
Confidence 56799999999887765
No 71
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.75 E-value=1.3e-17 Score=135.30 Aligned_cols=136 Identities=15% Similarity=0.247 Sum_probs=105.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
..|||+|||+|+||++++..|.+.|+ +|++| +|+++ .++++|+||+|+|++++++++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~----~V~~~-~~~~~------------------~~~~aD~vi~av~~~~~~~v~ 74 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH----EVTYY-GSKDQ------------------ATTLGEIVIMAVPYPALAALA 74 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CTTCC------------------CSSCCSEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-cCCHH------------------HhccCCEEEEcCCcHHHHHHH
Confidence 46899999999999999999999999 99999 99864 467899999999999999999
Q ss_pred HHhchhcCCCCEEEEEcCCCC---------------HHHHHHHhCCCCEEEE-----ccCchhhhcCC--c-eEEEeCCC
Q 024121 89 MQIRPLLSRKKLLVSVAAGVK---------------LKDLQEWTGHSRFIRV-----MPNTPSAVGEA--A-TVMSLGGT 145 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~---------------~~~l~~~~~~~~~~~~-----~p~~~~~~~~g--~-~~~~~~~~ 145 (272)
.++.+.++ +++++++++|++ .+.+++.+++.++++. .|+.+.....+ . .+++.+.
T Consensus 75 ~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~- 152 (209)
T 2raf_A 75 KQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPDSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGN- 152 (209)
T ss_dssp HHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTTSEEEECSTTSCHHHHHHSEETTTEECEEEEEES-
T ss_pred HHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCCCcEEEeeecccHhhccccccCCCCCceeEEcCC-
Confidence 99988887 899999988776 4667777776677773 34333332233 2 3334432
Q ss_pred CCHHHHHHHHHHhhhcCC-eEEcCcc
Q 024121 146 ATEEDGELIGKLFGSVGK-IWRADEK 170 (272)
Q Consensus 146 ~~~~~~~~v~~ll~~~G~-~~~~~e~ 170 (272)
+++..+.++++|+.+|. .+++++-
T Consensus 153 -~~~~~~~v~~ll~~~G~~~~~~~~i 177 (209)
T 2raf_A 153 -DDSAKQRFTRALADSPLEVKDAGKL 177 (209)
T ss_dssp -CHHHHHHHHHHTTTSSCEEEEEESG
T ss_pred -CHHHHHHHHHHHHHcCCceEeCCCH
Confidence 57889999999999994 5666653
No 72
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.75 E-value=5.2e-17 Score=145.27 Aligned_cols=191 Identities=14% Similarity=0.143 Sum_probs=133.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc--------------------CceeecCchhhh
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI--------------------GVKVLSDNNAVV 69 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~--------------------g~~~~~~~~~~~ 69 (272)
..||+|||+|.||.+||..|.++|| +|++| ||++++++.+.+. ++..++++.+++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~----~V~~~-D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~ 82 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGH----EVVCV-DKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGV 82 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHH
Confidence 3589999999999999999999999 99999 9999998887651 246677888889
Q ss_pred ccCCEEEEeeCcc-----------cHHHHHHHhchhcCCCCEEEEEcCCCCHH---HHHHHh----CCC-CEEEEccCch
Q 024121 70 EYSDVVVFSVKPQ-----------VVKDVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEWT----GHS-RFIRVMPNTP 130 (272)
Q Consensus 70 ~~aDivil~v~~~-----------~~~~v~~~l~~~l~~~~~iis~~~~~~~~---~l~~~~----~~~-~~~~~~p~~~ 130 (272)
++||+||+|||.. .++++++++.++++++++||+.+ ++++. .+.+.+ ++. -.+..-|.
T Consensus 83 ~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe-- 159 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVAPNSGAKVVSNPE-- 159 (446)
T ss_dssp TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHSTTSCCEEEECCC--
T ss_pred hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhCCCCCceEEeCcc--
Confidence 9999999998533 48999999999999999999864 66543 333322 111 12222332
Q ss_pred hhhcCCc---------eEEEeCCCCCHHHHHHHHHHhhhcCC----eEEcCcccchhHHHchHHHHHHHHHHHH---HHH
Q 024121 131 SAVGEAA---------TVMSLGGTATEEDGELIGKLFGSVGK----IWRADEKLFDAITGLSGPAYIFLAIEAL---ADG 194 (272)
Q Consensus 131 ~~~~~g~---------~~~~~~~~~~~~~~~~v~~ll~~~G~----~~~~~e~~~~~~~~~~~~~~~~~~~~~l---~~~ 194 (272)
...+|. .++..+. +++..+.++++|+.+++ .++.++..-..++++..+.+....+..+ ...
T Consensus 160 -~a~eG~a~~d~~~p~~ivvG~~--~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l 236 (446)
T 4a7p_A 160 -FLREGAAIEDFKRPDRVVVGTE--DEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADL 236 (446)
T ss_dssp -CCCTTSHHHHHHSCSCEEEECS--CHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccccchhhhccCCCEEEEeCC--cHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 3444432 57888999999999885 3555554455566666444444433333 335
Q ss_pred HHHcCCCHHHHHHHHHH
Q 024121 195 GVAAGLPRELALGLASQ 211 (272)
Q Consensus 195 ~~~~Gl~~~~a~~~~~~ 211 (272)
+.+.|+|.++..+++..
T Consensus 237 ~~~~GiD~~~v~~~~~~ 253 (446)
T 4a7p_A 237 CEQVGADVQEVSRGIGM 253 (446)
T ss_dssp HHHTTCCHHHHHHHHHT
T ss_pred HHHcCCCHHHHHHHHhc
Confidence 67999999998877753
No 73
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.73 E-value=2.8e-16 Score=135.49 Aligned_cols=154 Identities=14% Similarity=0.163 Sum_probs=112.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce---------------eecCchhhhccCCE
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK---------------VLSDNNAVVEYSDV 74 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~---------------~~~~~~~~~~~aDi 74 (272)
.|||+|||+|.||++++..|.++|+ +|++| +|++ .+.+.+.|+. ++.+.+++.+++|+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~----~V~~~-~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~Dl 74 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGH----CVSVV-SRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDC 74 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTC----EEEEE-CSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC----eEEEE-eCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCE
Confidence 3799999999999999999999999 99999 9986 2566555432 23455565558999
Q ss_pred EEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCC-HHHHHHHhCCCCEEEEccCc------hhhh---cCCceEEEeCC
Q 024121 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK-LKDLQEWTGHSRFIRVMPNT------PSAV---GEAATVMSLGG 144 (272)
Q Consensus 75 vil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~-~~~l~~~~~~~~~~~~~p~~------~~~~---~~g~~~~~~~~ 144 (272)
||+|||++++.++++++.+++.++++||++.+|+. .+.+++.++..+++...... |..+ +.+.+.+..-+
T Consensus 75 VilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~ 154 (320)
T 3i83_A 75 TLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYP 154 (320)
T ss_dssp EEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCEEEEEEEEEEEEEETTEEEEEEEEEEEEEESS
T ss_pred EEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcEEEEEEEeceEEcCCCEEEECCCCEEEEecCC
Confidence 99999999999999999999999999999999997 47888888754555432211 2222 22223332222
Q ss_pred CCCHHHHHHHHHHhhhcCCeEEcCcc
Q 024121 145 TATEEDGELIGKLFGSVGKIWRADEK 170 (272)
Q Consensus 145 ~~~~~~~~~v~~ll~~~G~~~~~~e~ 170 (272)
..+.+..+.+.++|+..|...+..++
T Consensus 155 ~~~~~~~~~l~~~l~~~~~~~~~~~d 180 (320)
T 3i83_A 155 GGVSERVKTLAAAFEEAGIDGIATEN 180 (320)
T ss_dssp SCCCHHHHHHHHHHHHTTSCEEECSC
T ss_pred CCccHHHHHHHHHHHhCCCCceECHH
Confidence 23456778899999998855444444
No 74
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.73 E-value=5.3e-17 Score=140.92 Aligned_cols=155 Identities=19% Similarity=0.257 Sum_probs=113.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-------------ecCchhhhccCCEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-------------LSDNNAVVEYSDVV 75 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-------------~~~~~~~~~~aDiv 75 (272)
+.|||+|||+|.||++++..|.++|+ +|++| +|+ ++.+.+.+.|+.+ ..+.++ +.++|+|
T Consensus 2 ~~mkI~IiGaG~~G~~~a~~L~~~g~----~V~~~-~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 2 SLTRICIVGAGAVGGYLGARLALAGE----AINVL-ARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCCCEEEESCCHHHHHHHHHHHHTTC----CEEEE-CCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-ECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 46899999999999999999999999 99999 996 6777777766543 234444 6899999
Q ss_pred EEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCC--------------------HHHHHHHhCCCCEEEEc---------
Q 024121 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK--------------------LKDLQEWTGHSRFIRVM--------- 126 (272)
Q Consensus 76 il~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~--------------------~~~l~~~~~~~~~~~~~--------- 126 (272)
|+|||+++++++++++.++++++++|+++.+|++ .+.+.+.++..+++...
T Consensus 75 ilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~gv~~~~a~~~~ 154 (335)
T 3ghy_A 75 IVAVKAPALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVS 154 (335)
T ss_dssp EECCCHHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEEEECCCEEESS
T ss_pred EEeCCchhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEEEEEEEEEEEcC
Confidence 9999999999999999999999999999999963 23577777744554322
Q ss_pred cCchhhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCCeEEcCcc
Q 024121 127 PNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEK 170 (272)
Q Consensus 127 p~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~e~ 170 (272)
|+.....+.+.+.+......+.+..+.+.++|+..|...+..++
T Consensus 155 pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~d 198 (335)
T 3ghy_A 155 PGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEA 198 (335)
T ss_dssp TTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSC
T ss_pred CcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCch
Confidence 22222223343333322223456778899999998865555544
No 75
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.72 E-value=8.7e-16 Score=132.31 Aligned_cols=149 Identities=20% Similarity=0.353 Sum_probs=111.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce-------------eecCchhhhccCCEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK-------------VLSDNNAVVEYSDVV 75 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~-------------~~~~~~~~~~~aDiv 75 (272)
..|||+|||+|.||++++..|.++|+ +|++| +++++.+.+.+.|.. .+.+.+ .+.++|+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~----~V~l~--~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~v 90 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH----EVILI--ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLV 90 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC----EEEEE--CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC----eEEEE--EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEE
Confidence 35899999999999999999999999 99999 457778888775533 234443 46899999
Q ss_pred EEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCH-HHHHHHhCCCCEEE---------EccCchhhhcCCceEEEeCCC
Q 024121 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL-KDLQEWTGHSRFIR---------VMPNTPSAVGEAATVMSLGGT 145 (272)
Q Consensus 76 il~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~-~~l~~~~~~~~~~~---------~~p~~~~~~~~g~~~~~~~~~ 145 (272)
|+|||+++++++++++.++++++++|+++++|+.. +.+.+.++ .+++. ..|+.....+.|.+.+ +.
T Consensus 91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~-~~vl~g~~~~~a~~~gP~~~~~~~~g~~~i--g~- 166 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE-QEVAAAVVYVATEMAGPGHVRHHGRGELVI--EP- 166 (318)
T ss_dssp EECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC-SEEEEEEEEEEEEEEETTEEEEEEEEEEEE--CC-
T ss_pred EEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC-CcEEEEEEEEeEEEcCCeEEEEcCCceEEE--cC-
Confidence 99999999999999999999999999999999997 67788776 34432 2244444444454333 32
Q ss_pred CCHHHHHHHHHHhhhcCCeEEcCcc
Q 024121 146 ATEEDGELIGKLFGSVGKIWRADEK 170 (272)
Q Consensus 146 ~~~~~~~~v~~ll~~~G~~~~~~e~ 170 (272)
.+..+.+.++|+..|..++.+++
T Consensus 167 --~~~~~~l~~~l~~~~~~~~~~~D 189 (318)
T 3hwr_A 167 --TSHGANLAAIFAAAGVPVETSDN 189 (318)
T ss_dssp --CTTTHHHHHHHHHTTCCEEECSC
T ss_pred --CHHHHHHHHHHHhCCCCcEechH
Confidence 34457889999988865555554
No 76
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.72 E-value=2e-16 Score=143.11 Aligned_cols=198 Identities=15% Similarity=0.185 Sum_probs=130.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHH-------------------cCceeecCc
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFES-------------------IGVKVLSDN 65 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~-------------------~g~~~~~~~ 65 (272)
|.++|||+|||+|.||.+++..|.++ |+ +|++| ||++++++.+.+ .++..+.++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~----~V~~~-d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~ 76 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEI----RVTVV-DVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNI 76 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTS----EEEEE-CSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCC----EEEEE-ECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCH
Confidence 33468999999999999999999998 78 99999 999998887532 245666777
Q ss_pred hhhhccCCEEEEeeCccc---------------HHHHHHHhchhcCCCCEEEEEcCCCCH---HHHHHHhC--CCC--EE
Q 024121 66 NAVVEYSDVVVFSVKPQV---------------VKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTG--HSR--FI 123 (272)
Q Consensus 66 ~~~~~~aDivil~v~~~~---------------~~~v~~~l~~~l~~~~~iis~~~~~~~---~~l~~~~~--~~~--~~ 123 (272)
.++++++|+||+|||... +.++++++.++++++++||+.+ +++. +.+.+.+. ... -.
T Consensus 77 ~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~g~~~~l~~~l~~~~~~~~d~ 155 (467)
T 2q3e_A 77 DDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS-TVPVRAAESIRRIFDANTKPNLNL 155 (467)
T ss_dssp HHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS-CCCTTHHHHHHHHHHHTCCTTCEE
T ss_pred HHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC-cCCchHHHHHHHHHHHhCCCCCCe
Confidence 788899999999996432 5677788888888898888754 3332 34444443 111 11
Q ss_pred EEccCchhhhcCCce---------EEEeCCC--CCHHHHHHHHHHhhhc-CC-eEEcCcccchhHHHchHHHHHHH---H
Q 024121 124 RVMPNTPSAVGEAAT---------VMSLGGT--ATEEDGELIGKLFGSV-GK-IWRADEKLFDAITGLSGPAYIFL---A 187 (272)
Q Consensus 124 ~~~p~~~~~~~~g~~---------~~~~~~~--~~~~~~~~v~~ll~~~-G~-~~~~~e~~~~~~~~~~~~~~~~~---~ 187 (272)
.+. ..|.....|.. ++..+.. .+++..+.++++++.+ |. .++.++.......++..+.+... +
T Consensus 156 ~V~-~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~ 234 (467)
T 2q3e_A 156 QVL-SNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISS 234 (467)
T ss_dssp EEE-ECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE-eCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 111 11222233332 3344321 2577889999999998 64 46655544445556553443322 2
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHH
Q 024121 188 IEALADGGVAAGLPRELALGLASQ 211 (272)
Q Consensus 188 ~~~l~~~~~~~Gl~~~~a~~~~~~ 211 (272)
+..+...+++.|++.++..+++..
T Consensus 235 ~nE~~~l~~~~Gid~~~v~~~~~~ 258 (467)
T 2q3e_A 235 INSISALCEATGADVEEVATAIGM 258 (467)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCHHHHHHHHcC
Confidence 233334577999999988776653
No 77
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.71 E-value=3.3e-16 Score=140.59 Aligned_cols=189 Identities=12% Similarity=0.130 Sum_probs=128.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-------------------cC-ceeecCchhhhc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-------------------IG-VKVLSDNNAVVE 70 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-------------------~g-~~~~~~~~~~~~ 70 (272)
|||+|||+|.||.+++..|.++|+ +|++| +|++++++.+.+ .| +..+.+..++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~----~V~~~-d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~ 75 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGH----EVIGV-DVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL 75 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc
Confidence 689999999999999999999999 99999 999999888765 23 556667777889
Q ss_pred cCCEEEEeeCccc----------HHHHHHHhchhcCC---CCEEEEEcCCCC----HHHHHHHhC---CC----C-EEEE
Q 024121 71 YSDVVVFSVKPQV----------VKDVAMQIRPLLSR---KKLLVSVAAGVK----LKDLQEWTG---HS----R-FIRV 125 (272)
Q Consensus 71 ~aDivil~v~~~~----------~~~v~~~l~~~l~~---~~~iis~~~~~~----~~~l~~~~~---~~----~-~~~~ 125 (272)
++|+||+|||... ++++++++.+++++ +++||+.+ +++ .+.+.+.+. +. . .+..
T Consensus 76 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S-tv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~ 154 (436)
T 1mv8_A 76 DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS-TVLPGTVNNVVIPLIEDCSGKKAGVDFGVGT 154 (436)
T ss_dssp TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS-CCCTTHHHHTHHHHHHHHHSCCBTTTBEEEE
T ss_pred cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC-CcCCCchHHHHHHHHHHhcCcccCCcEEEEE
Confidence 9999999997544 89999999988888 88888653 333 233443332 11 1 2222
Q ss_pred ccCchhhhcCCc---------eEEEeCCCCCHHHHHHHHHHhhhcCCeEEcCcccchhHHHchHHHHH---HHHHHHHHH
Q 024121 126 MPNTPSAVGEAA---------TVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGPAYI---FLAIEALAD 193 (272)
Q Consensus 126 ~p~~~~~~~~g~---------~~~~~~~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~~~~~~~~~---~~~~~~l~~ 193 (272)
.|. ....|. .++..+ .+++..+.++++++.+|..++.++-......++..+.+. ..+++.+..
T Consensus 155 ~Pe---~~~~G~~~~~~~~~~~iv~G~--~~~~~~~~~~~l~~~~~~~v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~ 229 (436)
T 1mv8_A 155 NPE---FLRESTAIKDYDFPPMTVIGE--LDKQTGDLLEEIYRELDAPIIRKTVEVAEMIKYTCNVWHAAKVTFANEIGN 229 (436)
T ss_dssp CCC---CCCTTSHHHHHHSCSCEEEEE--SSHHHHHHHHHHHTTSSSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ccc---cccccccchhccCCCEEEEEc--CCHHHHHHHHHHHhccCCCEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 122222 233332 257888999999999996543343333344455434433 234444455
Q ss_pred HHHHcCCCHHHHHHHHH
Q 024121 194 GGVAAGLPRELALGLAS 210 (272)
Q Consensus 194 ~~~~~Gl~~~~a~~~~~ 210 (272)
.+.+.|++.++..+++.
T Consensus 230 l~~~~Gid~~~v~~~~~ 246 (436)
T 1mv8_A 230 IAKAVGVDGREVMDVIC 246 (436)
T ss_dssp HHHHTTSCHHHHHHHHT
T ss_pred HHHHhCCCHHHHHHHhc
Confidence 67899999987766654
No 78
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.69 E-value=4.8e-16 Score=140.61 Aligned_cols=190 Identities=19% Similarity=0.185 Sum_probs=129.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-------C-------------ceeecCchhhh
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-------G-------------VKVLSDNNAVV 69 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~-------g-------------~~~~~~~~~~~ 69 (272)
.|||+|||+|.||.++|..|.++|+ +|++| ||++++++.+.+. | +..+++..+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~----~V~~~-d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~ 82 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGH----DVFCL-DVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAV 82 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHh
Confidence 5899999999999999999999999 99999 9999999888762 2 34556666788
Q ss_pred ccCCEEEEeeCc----------ccHHHHHHHhchhcCCCCEEEEEcCCCCH---HHHHHHhC-----C---CCE-EEEcc
Q 024121 70 EYSDVVVFSVKP----------QVVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTG-----H---SRF-IRVMP 127 (272)
Q Consensus 70 ~~aDivil~v~~----------~~~~~v~~~l~~~l~~~~~iis~~~~~~~---~~l~~~~~-----~---~~~-~~~~p 127 (272)
++||+||+|||. ..++++++++.++++++++||+.+ ++++ +.+.+.+. + ..+ +...|
T Consensus 83 ~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S-Tv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~P 161 (478)
T 2y0c_A 83 AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS-TVPVGTAERVRAAVAEELAKRGGDQMFSVVSNP 161 (478)
T ss_dssp HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CcCCCchHHHHHHHHHHhcCCCCCccEEEEECh
Confidence 999999999986 688999999999999998888764 6543 23332221 1 111 22223
Q ss_pred CchhhhcCCc---------eEEEeCCCCCH----HHHHHHHHHhhhcCC---eEEcCcccchhHHHchHHHHHH---HHH
Q 024121 128 NTPSAVGEAA---------TVMSLGGTATE----EDGELIGKLFGSVGK---IWRADEKLFDAITGLSGPAYIF---LAI 188 (272)
Q Consensus 128 ~~~~~~~~g~---------~~~~~~~~~~~----~~~~~v~~ll~~~G~---~~~~~e~~~~~~~~~~~~~~~~---~~~ 188 (272)
. ....|. .++..+. ++ +..+.++++|+.+++ .++.++-......++..+.+.. .++
T Consensus 162 e---~~~eG~~~~~~~~p~~iviG~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~ 236 (478)
T 2y0c_A 162 E---FLKEGAAVDDFTRPDRIVIGCD--DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFM 236 (478)
T ss_dssp C---CCCTTCHHHHHHSCSCEEEECC--SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h---hhcccceeeccCCCCEEEEEEC--CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 122222 2343332 34 678899999998774 4555444344455555344432 233
Q ss_pred HHHHHHHHHcCCCHHHHHHHHH
Q 024121 189 EALADGGVAAGLPRELALGLAS 210 (272)
Q Consensus 189 ~~l~~~~~~~Gl~~~~a~~~~~ 210 (272)
..+...+++.|++.++..+.+.
T Consensus 237 nE~~~la~~~Gid~~~v~~~i~ 258 (478)
T 2y0c_A 237 NELANLADRFGADIEAVRRGIG 258 (478)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHh
Confidence 4444467899999987765543
No 79
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.68 E-value=6.6e-15 Score=125.77 Aligned_cols=153 Identities=14% Similarity=0.093 Sum_probs=122.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH-----------HcC--------------ceeec
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE-----------SIG--------------VKVLS 63 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~-----------~~g--------------~~~~~ 63 (272)
...||+|||+|.||+.||..++.+|+ +|++| |++++.+++.. +.| +..+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~----~V~l~-D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~ 79 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF----RVKLY-DIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCT 79 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEEC
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccccc
Confidence 35689999999999999999999999 99999 99987644321 111 23456
Q ss_pred CchhhhccCCEEEEeeCcc--cHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEE
Q 024121 64 DNNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVM 140 (272)
Q Consensus 64 ~~~~~~~~aDivil~v~~~--~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~ 140 (272)
+..+++++||+|+-|+|-+ .-++++.+|.++.+++.++.|.+|++++..+.+.+. ..+++..||..|...-. +.=+
T Consensus 80 ~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~-LVEi 158 (319)
T 3ado_A 80 NLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIP-LVEL 158 (319)
T ss_dssp CHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCC-EEEE
T ss_pred chHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccc-hHHh
Confidence 6778899999999999854 346888999999999999999999999999988765 36899999887776543 3335
Q ss_pred EeCCCCCHHHHHHHHHHhhhcCCe-EEc
Q 024121 141 SLGGTATEEDGELIGKLFGSVGKI-WRA 167 (272)
Q Consensus 141 ~~~~~~~~~~~~~v~~ll~~~G~~-~~~ 167 (272)
.++..++++..+.+..+.+.+|+. +.+
T Consensus 159 v~g~~Ts~~~~~~~~~~~~~~gk~pv~v 186 (319)
T 3ado_A 159 VPHPETSPATVDRTHALMRKIGQSPVRV 186 (319)
T ss_dssp EECTTCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCCCCcHHHHHHHHHHHHHhCCccCCc
Confidence 678889999999999999999965 544
No 80
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.68 E-value=9.1e-16 Score=139.10 Aligned_cols=197 Identities=13% Similarity=0.126 Sum_probs=129.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHc-------------------CceeecCch
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESI-------------------GVKVLSDNN 66 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~~-------------------g~~~~~~~~ 66 (272)
+++|||+|||+|.||.++|..|.++ |+ +|++| ||++++++.+.+. ++..++++.
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~----~V~~~-D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~ 81 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHI----TVTVV-DMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIP 81 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTS----EEEEE-CSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCC----EEEEE-ECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHH
Confidence 3468999999999999999999998 68 99999 9999998887641 244555666
Q ss_pred hhhccCCEEEEeeCcc---------------cHHHHHHHhchhcCCCCEEEEEcCCCCH---HHHHHHhCC-------CC
Q 024121 67 AVVEYSDVVVFSVKPQ---------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTGH-------SR 121 (272)
Q Consensus 67 ~~~~~aDivil~v~~~---------------~~~~v~~~l~~~l~~~~~iis~~~~~~~---~~l~~~~~~-------~~ 121 (272)
++++++|+||+|||.. .+.++++++.++++++++||+.+ +++. +.+.+.+.. ..
T Consensus 82 ~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~~~~~~~d 160 (481)
T 2o3j_A 82 KAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS-TVPVKAAESIGCILREAQKNNENLK 160 (481)
T ss_dssp HHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHTC----CC
T ss_pred HHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC-CCCCCHHHHHHHHHHHhhCcCcCCc
Confidence 7788999999998642 27888889999999999888653 4442 334433321 11
Q ss_pred -EEEEccCc--hhhh----cCCceEEEeCCCC--CHHHHHHHHHHhhhcCC--eEEcCcccchhHHHchHHHHHH---HH
Q 024121 122 -FIRVMPNT--PSAV----GEAATVMSLGGTA--TEEDGELIGKLFGSVGK--IWRADEKLFDAITGLSGPAYIF---LA 187 (272)
Q Consensus 122 -~~~~~p~~--~~~~----~~g~~~~~~~~~~--~~~~~~~v~~ll~~~G~--~~~~~e~~~~~~~~~~~~~~~~---~~ 187 (272)
.+...|.. |... .....++..+... +++..+.++++++.++. .++.++.......++..+.+.. .+
T Consensus 161 ~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~ 240 (481)
T 2o3j_A 161 FQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISS 240 (481)
T ss_dssp EEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 13334431 1110 1111344333211 12577899999999984 3555544445556665333322 23
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHH
Q 024121 188 IEALADGGVAAGLPRELALGLAS 210 (272)
Q Consensus 188 ~~~l~~~~~~~Gl~~~~a~~~~~ 210 (272)
+..+...+++.|++.++..+.+.
T Consensus 241 ~nE~~~la~~~Gid~~~v~~~~~ 263 (481)
T 2o3j_A 241 INSISAVCEATGAEISEVAHAVG 263 (481)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCHHHHHHHHc
Confidence 33344467799999998877765
No 81
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.67 E-value=3.5e-15 Score=132.41 Aligned_cols=192 Identities=13% Similarity=0.102 Sum_probs=125.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc------------------eeecCchhhhccC
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV------------------KVLSDNNAVVEYS 72 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~------------------~~~~~~~~~~~~a 72 (272)
|||+|||+|.||.+++..|.+ |+ +|++| +|++++.+.+.+.+. ..+.++.++++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~----~V~~~-d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~a 74 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QN----EVTIV-DILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEA 74 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TS----EEEEE-CSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHhC-CC----EEEEE-ECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCC
Confidence 689999999999999999999 99 99999 999999988876443 4455666778899
Q ss_pred CEEEEeeCcc-----------cHHHHHHHhchhcCCCCEEEEE-cCCCC-HHHHHHHhCCCCEEEEccCc--hhhh----
Q 024121 73 DVVVFSVKPQ-----------VVKDVAMQIRPLLSRKKLLVSV-AAGVK-LKDLQEWTGHSRFIRVMPNT--PSAV---- 133 (272)
Q Consensus 73 Divil~v~~~-----------~~~~v~~~l~~~l~~~~~iis~-~~~~~-~~~l~~~~~~~~~~~~~p~~--~~~~---- 133 (272)
|+||+|||+. .+.++++++.+ ++++++||+. +.+.. .+.+.+.++...++ ..|.. |...
T Consensus 75 Dvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~-~~Pe~~~~G~a~~~~ 152 (402)
T 1dlj_A 75 ELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDRII-FSPEFLRESKALYDN 152 (402)
T ss_dssp SEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSCEE-ECCCCCCTTSTTHHH
T ss_pred CEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCeEE-ECCccccCcchhhcc
Confidence 9999999876 58999999988 8899998863 33333 35666666533333 23321 1110
Q ss_pred cCCceEEEeCCCC----CHHHHHHHHHHhhh-cCC---eEEcCcccchhHHHchHHHHHH---HHHHHHHHHHHHcCCCH
Q 024121 134 GEAATVMSLGGTA----TEEDGELIGKLFGS-VGK---IWRADEKLFDAITGLSGPAYIF---LAIEALADGGVAAGLPR 202 (272)
Q Consensus 134 ~~g~~~~~~~~~~----~~~~~~~v~~ll~~-~G~---~~~~~e~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~Gl~~ 202 (272)
.....++..+... ..+..+.+.++|.. ... .++.++-......++..+.+.. .++..+...+.+.|+|.
T Consensus 153 ~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~ 232 (402)
T 1dlj_A 153 LYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNS 232 (402)
T ss_dssp HSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred cCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 1111134333311 11556778888865 333 3444444444555655333332 23333444678999999
Q ss_pred HHHHHHHH
Q 024121 203 ELALGLAS 210 (272)
Q Consensus 203 ~~a~~~~~ 210 (272)
++..+.+.
T Consensus 233 ~~v~~~~~ 240 (402)
T 1dlj_A 233 HMIIQGIS 240 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 98887765
No 82
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.66 E-value=3.2e-15 Score=128.15 Aligned_cols=109 Identities=17% Similarity=0.295 Sum_probs=88.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecC----------chhhhccCCEEEEee
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD----------NNAVVEYSDVVVFSV 79 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~----------~~~~~~~aDivil~v 79 (272)
.|||+|||+|+||++++..|. +|+ +|++| +|++++.+.+.+.|+.+..+ ..+...++|+||+||
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~----~V~~~-~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 75 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH----DVTVV-TRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTV 75 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS----EEEEE-CSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC----ceEEE-ECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEe
Confidence 489999999999999999999 998 99999 99998888888877654321 134567899999999
Q ss_pred CcccHHHHHHHhchhcCCCCEEEEEcCCCCHH-HHHHHhCCCCEEEEc
Q 024121 80 KPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLK-DLQEWTGHSRFIRVM 126 (272)
Q Consensus 80 ~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~-~l~~~~~~~~~~~~~ 126 (272)
|+++++++++.+.+. .+++ ||++.+|+..+ .+++.++..+++...
T Consensus 76 K~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~~~~vl~g~ 121 (307)
T 3ego_A 76 KQHQLQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHVGHSIYVGI 121 (307)
T ss_dssp CGGGHHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCCSCEEEEEE
T ss_pred CHHHHHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCCCCcEEEEE
Confidence 999999999999875 5665 99999999874 777777755555443
No 83
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.65 E-value=2.1e-15 Score=135.68 Aligned_cols=194 Identities=15% Similarity=0.102 Sum_probs=130.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHH----HHHHHHH---------------------cC-ce
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLK----RRDAFES---------------------IG-VK 60 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~----~~~~l~~---------------------~g-~~ 60 (272)
+.+|||+|||+|.||.++|..|.++ ||. +|++| ||+++ +++.+.+ .| +.
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~---~V~~~-D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~ 91 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFE---KVLGF-QRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFE 91 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCC---EEEEE-CCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCC---eEEEE-ECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeE
Confidence 4578999999999999999999999 862 79999 99999 8877754 12 33
Q ss_pred eecCchhhhccCCEEEEeeCcc------------cHHHHHHHhchhcCCCCEEEEEcCCCCH---HHHH-----HHhCC-
Q 024121 61 VLSDNNAVVEYSDVVVFSVKPQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQ-----EWTGH- 119 (272)
Q Consensus 61 ~~~~~~~~~~~aDivil~v~~~------------~~~~v~~~l~~~l~~~~~iis~~~~~~~---~~l~-----~~~~~- 119 (272)
.+++ .+++++||+||+|||.. .+..+.+++.++++++++||.. +++++ +.+. +..+.
T Consensus 92 ~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~-STv~pgtt~~v~~~ile~~~g~~ 169 (478)
T 3g79_A 92 CTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLE-STITPGTTEGMAKQILEEESGLK 169 (478)
T ss_dssp EESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEEC-SCCCTTTTTTHHHHHHHHHHCCC
T ss_pred EeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEe-CCCChHHHHHHHHHHHHHhcCCC
Confidence 4445 67889999999999743 2566778888999999998865 45543 2232 22221
Q ss_pred --CC-EEEEccCc--hhhh----cCCceEEEeCCCCCHHHHHHHHHHhhhc-CC-eEEcCcccchhHHHchHHHHHHHHH
Q 024121 120 --SR-FIRVMPNT--PSAV----GEAATVMSLGGTATEEDGELIGKLFGSV-GK-IWRADEKLFDAITGLSGPAYIFLAI 188 (272)
Q Consensus 120 --~~-~~~~~p~~--~~~~----~~g~~~~~~~~~~~~~~~~~v~~ll~~~-G~-~~~~~e~~~~~~~~~~~~~~~~~~~ 188 (272)
.. .+-.-|.. +... ..-..++..+ +++..+.++++++.+ +. .++.++......++++.+.|...-+
T Consensus 170 ~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~---~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~I 246 (478)
T 3g79_A 170 AGEDFALAHAPERVMVGRLLKNIREHDRIVGGI---DEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQI 246 (478)
T ss_dssp BTTTBEEEECCCCCCTTSHHHHHHHSCEEEEES---SHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceeEEeCCccCCccchhhhhcCCcEEEEeC---CHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 11 12223321 1111 1111344333 688889999999999 64 5666666666677776444444333
Q ss_pred ---HHHHHHHHHcCCCHHHHHHHHH
Q 024121 189 ---EALADGGVAAGLPRELALGLAS 210 (272)
Q Consensus 189 ---~~l~~~~~~~Gl~~~~a~~~~~ 210 (272)
..+...+++.|+|.++..+.+.
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~ 271 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVD 271 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHC
Confidence 3333356899999999888765
No 84
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.63 E-value=2.4e-14 Score=127.19 Aligned_cols=184 Identities=17% Similarity=0.167 Sum_probs=126.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC--------------------ceeecCchhhhc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG--------------------VKVLSDNNAVVE 70 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g--------------------~~~~~~~~~~~~ 70 (272)
.|+.|||+|.||.+||.+|.++|| +|++| ||++++++.+.+.. +..+++ ++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~----~V~~~-D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd----~~ 82 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGV----DVLGV-DINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTT----PE 82 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESS----CC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCc----hh
Confidence 589999999999999999999999 99999 99999999887621 222222 45
Q ss_pred cCCEEEEeeCccc------------HHHHHHHhchhcCCCCEEEEEcCCCCHH---HHHHH----hCC---CC-EEEEcc
Q 024121 71 YSDVVVFSVKPQV------------VKDVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEW----TGH---SR-FIRVMP 127 (272)
Q Consensus 71 ~aDivil~v~~~~------------~~~v~~~l~~~l~~~~~iis~~~~~~~~---~l~~~----~~~---~~-~~~~~p 127 (272)
+||+||+|||... +..+.+++.++++++++||.. +++++. .+.+. .+. .. .+-.-|
T Consensus 83 ~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~-STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~P 161 (431)
T 3ojo_A 83 ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVE-STIAPKTMDDFVKPVIENLGFTIGEDIYLVHCP 161 (431)
T ss_dssp CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEEC-SCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECC
T ss_pred hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEe-cCCChhHHHHHHHHHHHHcCCCcCCCeEEEECC
Confidence 8999999997432 677778899999999988865 566543 23221 110 11 122223
Q ss_pred CchhhhcCCc---------eEEEeCCCCCHHHHHHHHHHhhhcCC-eEEcCcccchhHHHchHHHHHHHH---HHHHHHH
Q 024121 128 NTPSAVGEAA---------TVMSLGGTATEEDGELIGKLFGSVGK-IWRADEKLFDAITGLSGPAYIFLA---IEALADG 194 (272)
Q Consensus 128 ~~~~~~~~g~---------~~~~~~~~~~~~~~~~v~~ll~~~G~-~~~~~e~~~~~~~~~~~~~~~~~~---~~~l~~~ 194 (272)
. ....|. .++. |. +++..+.++++++.+++ .++.++......++++.+.|...- +..+...
T Consensus 162 e---~~~~G~A~~~~~~p~~Iv~-G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l 235 (431)
T 3ojo_A 162 E---RVLPGKILEELVHNNRIIG-GV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKI 235 (431)
T ss_dssp C---CCCTTSHHHHHHHSCEEEE-ES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---cCCCcchhhcccCCCEEEE-eC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111221 3443 42 68899999999999985 466666666677777644444332 3333445
Q ss_pred HHHcCCCHHHHHHHHH
Q 024121 195 GVAAGLPRELALGLAS 210 (272)
Q Consensus 195 ~~~~Gl~~~~a~~~~~ 210 (272)
+.+.|+|.++..+.+.
T Consensus 236 ~e~~GiD~~~v~~~~~ 251 (431)
T 3ojo_A 236 CNNLNINVLDVIEMAN 251 (431)
T ss_dssp HHHTTCCHHHHHHHHT
T ss_pred HHHcCCCHHHHHHHHc
Confidence 7899999998887765
No 85
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.59 E-value=1e-15 Score=130.45 Aligned_cols=150 Identities=12% Similarity=0.097 Sum_probs=103.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc---eeecCchhhh-ccCCEEEEeeCcccHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV---KVLSDNNAVV-EYSDVVVFSVKPQVVK 85 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~---~~~~~~~~~~-~~aDivil~v~~~~~~ 85 (272)
+|||+|||+|+||++++..|.++|+ +|++| +|+++.++.....|. .+..++.+.+ .++|+||+|||+++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~----~V~~~-~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~~~ 76 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLP----HTTLI-GRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQLD 76 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCT----TCEEE-ESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGGHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCC----eEEEE-EeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccCHH
Confidence 4799999999999999999999998 99999 998765432111232 2333445544 7899999999999999
Q ss_pred HHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhCCCCEEEEcc------CchhhhcCCceEEEeCCCCCHHHHHHHHHHhh
Q 024121 86 DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMP------NTPSAVGEAATVMSLGGTATEEDGELIGKLFG 159 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~~~~~~~~~p------~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~ 159 (272)
++++++.+++.++++||++.+|+..+.. ++..+++.... ..|..+..+...+..+ +.+..+.+.++|+
T Consensus 77 ~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~~~~v~~g~~~~~a~~~~pg~v~~~~~~~~~~---~~~~~~~l~~~l~ 150 (294)
T 3g17_A 77 AVIPHLTYLAHEDTLIILAQNGYGQLEH---IPFKNVCQAVVYISGQKKGDVVTHFRDYQLRIQ---DNALTRQFRDLVQ 150 (294)
T ss_dssp HHGGGHHHHEEEEEEEEECCSSCCCGGG---CCCSCEEECEEEEEEEEETTEEEEEEEEEEEEE---CSHHHHHHHHHTT
T ss_pred HHHHHHHHhhCCCCEEEEeccCcccHhh---CCCCcEEEEEEEEEEEEcCCCEEEECCCEEecC---ccHHHHHHHHHHH
Confidence 9999999999889999999999987653 55434433211 1122111111122222 3466788889998
Q ss_pred hcCCeEEcCcc
Q 024121 160 SVGKIWRADEK 170 (272)
Q Consensus 160 ~~G~~~~~~e~ 170 (272)
..|-..+.+++
T Consensus 151 ~~~~~~~~~~d 161 (294)
T 3g17_A 151 DSQIDIVLEAN 161 (294)
T ss_dssp TSSCEEEEESS
T ss_pred hCCCceEEChH
Confidence 87755444444
No 86
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.53 E-value=5.1e-14 Score=122.98 Aligned_cols=94 Identities=19% Similarity=0.233 Sum_probs=80.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-Cc--------------eeecCchhhhccC
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-GV--------------KVLSDNNAVVEYS 72 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~-g~--------------~~~~~~~~~~~~a 72 (272)
|++|||+|||+|.||+.++..|.++|+ +|++| +|++++.+.+.+. ++ ....+..++++++
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQ----SVLAW-DIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcC
Confidence 556899999999999999999999999 99999 9999998888764 32 2445667778899
Q ss_pred CEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcC
Q 024121 73 DVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 73 Divil~v~~~~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
|+||+|||++...+++.++.++++++++|+++.+
T Consensus 77 D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 77 DVILIVVPAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp SEEEECSCGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred CEEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 9999999999999999999999999998998743
No 87
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.49 E-value=5.9e-13 Score=116.49 Aligned_cols=158 Identities=16% Similarity=0.115 Sum_probs=106.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCC----CCCcEEEEeCCCHHH-----HHHHHH--------------cCceeecCchh
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVL----PPDRICTAVHSNLKR-----RDAFES--------------IGVKVLSDNNA 67 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~----~~~~V~v~~~r~~~~-----~~~l~~--------------~g~~~~~~~~~ 67 (272)
.||+|||+|.||+++|..|.++|+- ...+|.+| .|+++. .+.+.+ .++.++.|..+
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw-~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~ 113 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMW-VFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLID 113 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEE-CCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEE-EcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHH
Confidence 5999999999999999999988740 00149999 887642 222222 13566778889
Q ss_pred hhccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCH---------HHHHHHhCCCCE-EEEccCchhhhcCCc
Q 024121 68 VVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL---------KDLQEWTGHSRF-IRVMPNTPSAVGEAA 137 (272)
Q Consensus 68 ~~~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~---------~~l~~~~~~~~~-~~~~p~~~~~~~~g~ 137 (272)
+++++|+||++||.+.+++++.++.+++++++.+|+++.|+.. +.+.+.++ .++ +-.-|++...+..+.
T Consensus 114 al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~-~~~~vLsGPs~A~EVa~~~ 192 (391)
T 4fgw_A 114 SVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELG-IQCGALSGANIATEVAQEH 192 (391)
T ss_dssp HHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHC-CEEEEEECSCCHHHHHTTC
T ss_pred HHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhC-ccceeccCCchHHHhhcCC
Confidence 9999999999999999999999999999999999999999742 23444444 333 223588887776654
Q ss_pred e-EE-EeCCC-------CCHHHHHHHHHHhhhcCCeEEcCcc
Q 024121 138 T-VM-SLGGT-------ATEEDGELIGKLFGSVGKIWRADEK 170 (272)
Q Consensus 138 ~-~~-~~~~~-------~~~~~~~~v~~ll~~~G~~~~~~e~ 170 (272)
. .+ ..... .+....+.++.+|..---.++.+++
T Consensus 193 pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~D 234 (391)
T 4fgw_A 193 WSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIED 234 (391)
T ss_dssp CEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESC
T ss_pred CceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 2 22 22211 1122346677877653322344443
No 88
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.47 E-value=1.2e-11 Score=116.67 Aligned_cols=156 Identities=19% Similarity=0.206 Sum_probs=123.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---------------c-------CceeecC
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---------------I-------GVKVLSD 64 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~---------------~-------g~~~~~~ 64 (272)
++..+||+|||+|.||+.||..+..+|+ +|+++ |++++.+++..+ . .+....+
T Consensus 313 ~~~i~~v~ViGaG~MG~gIA~~~a~aG~----~V~l~-D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 387 (742)
T 3zwc_A 313 AQPVSSVGVLGLGTMGRGIAISFARVGI----SVVAV-ESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSS 387 (742)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESC
T ss_pred cccccEEEEEcccHHHHHHHHHHHhCCC----chhcc-cchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCc
Confidence 3456899999999999999999999999 99999 999876543221 0 1233344
Q ss_pred chhhhccCCEEEEeeCcc--cHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceEEE
Q 024121 65 NNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMS 141 (272)
Q Consensus 65 ~~~~~~~aDivil~v~~~--~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~~~ 141 (272)
. +.+.+||+||-+|+-+ .-++++.++.++.+++.++.|.+|++++..+.+.+. ..++++.|+..|...-. +.-+.
T Consensus 388 ~-~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~-LVEvi 465 (742)
T 3zwc_A 388 T-KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMR-LLEVI 465 (742)
T ss_dssp G-GGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCC-EEEEE
T ss_pred H-HHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCc-eEEEe
Confidence 4 4478999999999754 346888999999999999999999999999988765 36799999877776543 33355
Q ss_pred eCCCCCHHHHHHHHHHhhhcCCe-EEcCc
Q 024121 142 LGGTATEEDGELIGKLFGSVGKI-WRADE 169 (272)
Q Consensus 142 ~~~~~~~~~~~~v~~ll~~~G~~-~~~~e 169 (272)
+++.++++.++.+..+.+.+|+. ++..+
T Consensus 466 ~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd 494 (742)
T 3zwc_A 466 PSRYSSPTTIATVMSLSKKIGKIGVVVGN 494 (742)
T ss_dssp ECSSCCHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCcccCC
Confidence 78889999999999999999976 55543
No 89
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=99.41 E-value=1e-10 Score=102.02 Aligned_cols=205 Identities=16% Similarity=0.126 Sum_probs=139.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH------HHHHHHHHcCceeecCchhhhccCCEEEEeeC
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL------KRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~------~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~ 80 (272)
..+.++|+|||+|.-|.+-|.+|.++|. +|.+- -|.. ...+++.+.|..+. +..|+++.+|+|++.+|
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv----~V~Vg-lr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~P 107 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGL----DISYA-LRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTP 107 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTC----EEEEE-ECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSC
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCC----cEEEE-eCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCC
Confidence 3466899999999999999999999999 99888 6632 34556666898875 68899999999999999
Q ss_pred cccHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhh-------cCCceEEEeC---CCCCHH
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAV-------GEAATVMSLG---GTATEE 149 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~-------~~g~~~~~~~---~~~~~~ 149 (272)
+..-.++++.|.|++++|+++. .+.|..+..-.-..| +..++-+-|-.|.+. +.|+..++.- .+.+..
T Consensus 108 D~~q~~vy~~I~p~lk~G~~L~-faHGFnI~~~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~liAVhqeqD~sG~ 186 (491)
T 3ulk_A 108 DKQHSDVVRTVQPLMKDGAALG-YSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGE 186 (491)
T ss_dssp GGGHHHHHHHHGGGSCTTCEEE-ESSCHHHHTTCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEEEEECGGGCTTSC
T ss_pred hhhHHHHHHHHHhhCCCCCEEE-ecCcccccccccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceEEEEEeCCCCchh
Confidence 9999999999999999999877 566764432111112 456777767766542 5566544322 233456
Q ss_pred HHHHHHHHhhhcCC--e--EEc---CcccchhHH---HchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 024121 150 DGELIGKLFGSVGK--I--WRA---DEKLFDAIT---GLSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASM 219 (272)
Q Consensus 150 ~~~~v~~ll~~~G~--~--~~~---~e~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~Gl~~~~a~~~~~~~~~g~~~~ 219 (272)
..+....+-..+|. . +.. .|...|.+. .+|| .+..++.+..+...+.|.+|+.+.........-..++
T Consensus 187 a~~~AlayA~aiG~~raGvieTTF~eEtetDLfGEQaVLcG--gl~~li~agFetLveaGy~P~~a~~~~~~e~klIvdl 264 (491)
T 3ulk_A 187 GMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCG--MLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEA 264 (491)
T ss_dssp HHHHHHHHHHHHTGGGTCEEECCHHHHHHHHHHHHHTTTTH--HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcCceeeccHHHHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhHHHHH
Confidence 77888888888883 2 222 233344443 3442 2334444555677889999988765554433333444
Q ss_pred H
Q 024121 220 V 220 (272)
Q Consensus 220 ~ 220 (272)
+
T Consensus 265 i 265 (491)
T 3ulk_A 265 L 265 (491)
T ss_dssp H
T ss_pred H
Confidence 3
No 90
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.40 E-value=9.1e-13 Score=117.06 Aligned_cols=95 Identities=16% Similarity=0.223 Sum_probs=78.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHh-CCCCCCCcEEEEeC---CCHHHHHHH-HHcC------------c-------eeecCc
Q 024121 10 SFILGFIGAGKMAESIAKGVAK-SGVLPPDRICTAVH---SNLKRRDAF-ESIG------------V-------KVLSDN 65 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~-~g~~~~~~V~v~~~---r~~~~~~~l-~~~g------------~-------~~~~~~ 65 (272)
+|||+|||+|.||++++..|.+ +|+ +|++| + |++++.+.+ .+.| . .++.++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~----~V~~~-~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGV----EVRVL-TLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDP 76 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTE----EEEEE-CCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCH
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCC----EEEEE-eCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCH
Confidence 4799999999999999999988 599 99999 9 888887774 3332 1 134566
Q ss_pred hhhhccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 66 NAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 66 ~~~~~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
.++++++|+||+|||++..+++++++.++++++++|++..++..
T Consensus 77 ~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 77 EIAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp HHHHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred HHHhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 67788999999999999999999999999988999998655554
No 91
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.37 E-value=1.7e-12 Score=118.83 Aligned_cols=164 Identities=12% Similarity=0.144 Sum_probs=110.5
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|+||+++|++|...|+ +|++| ||++.. +...+.|+... +..+++++||+|++|+|+. ..
T Consensus 138 ~~l~g~~vgIIG~G~IG~~vA~~l~~~G~----~V~~~-d~~~~~-~~a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~t 210 (529)
T 1ygy_A 138 TEIFGKTVGVVGLGRIGQLVAQRIAAFGA----YVVAY-DPYVSP-ARAAQLGIELL-SLDDLLARADFISVHLPKTPET 210 (529)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CTTSCH-HHHHHHTCEEC-CHHHHHHHCSEEEECCCCSTTT
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCCC----EEEEE-CCCCCh-hHHHhcCcEEc-CHHHHHhcCCEEEECCCCchHH
Confidence 34566899999999999999999999999 99999 998643 34455687765 7888999999999999987 67
Q ss_pred HHHHHH-hchhcCCCCEEEEEcCCCC--HHHHHHHhCCCCEE----EEccCchh----hhcCCceEEEeCCC-CCHHHHH
Q 024121 85 KDVAMQ-IRPLLSRKKLLVSVAAGVK--LKDLQEWTGHSRFI----RVMPNTPS----AVGEAATVMSLGGT-ATEEDGE 152 (272)
Q Consensus 85 ~~v~~~-l~~~l~~~~~iis~~~~~~--~~~l~~~~~~~~~~----~~~p~~~~----~~~~g~~~~~~~~~-~~~~~~~ 152 (272)
..++.+ +.+.++++.++++++.+-. ...+.+.+...++. .+.+..|. .......+++|... .+.+..+
T Consensus 211 ~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~ 290 (529)
T 1ygy_A 211 AGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQD 290 (529)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHH
T ss_pred HHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHH
Confidence 777654 6667889999999876543 34455555422221 12233332 11223455666544 4566555
Q ss_pred H-----HHHHhhhcC-Ce----EEcC-cccchhHH
Q 024121 153 L-----IGKLFGSVG-KI----WRAD-EKLFDAIT 176 (272)
Q Consensus 153 ~-----v~~ll~~~G-~~----~~~~-e~~~~~~~ 176 (272)
. ++.+.+.++ .. +.++ ++.|+.+.
T Consensus 291 ~~~~~~~~~l~~~l~~~~~~~~v~~~~~~~hd~i~ 325 (529)
T 1ygy_A 291 RAGTDVAESVRLALAGEFVPDAVNVGGGVVNEEVA 325 (529)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTBCSCCSTTSCTTTT
T ss_pred HHHHHHHHHHHHHHcCCCCCcccCCcccccchhhh
Confidence 3 666666665 22 3456 56666654
No 92
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.34 E-value=1.2e-10 Score=103.47 Aligned_cols=198 Identities=13% Similarity=0.126 Sum_probs=126.1
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-------------------c-Cceeec
Q 024121 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-------------------I-GVKVLS 63 (272)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-------------------~-g~~~~~ 63 (272)
.|+...+.+|+|||+|-+|..+|..|.+.|| +|+++ |.++++.+.+.+ . .+..++
T Consensus 15 ~p~~~~m~~IaViGlGYVGLp~A~~~A~~G~----~V~g~-Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt 89 (444)
T 3vtf_A 15 VPRGSHMASLSVLGLGYVGVVHAVGFALLGH----RVVGY-DVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAE 89 (444)
T ss_dssp CCTTCCCCEEEEECCSHHHHHHHHHHHHHTC----EEEEE-CSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECS
T ss_pred CCCCCCCCEEEEEccCHHHHHHHHHHHhCCC----cEEEE-ECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEc
Confidence 4666678899999999999999999999999 99999 999999877753 1 234566
Q ss_pred CchhhhccCCEEEEeeCc----------ccHHHHHHHhchhcC---CCCEEEEEcCCCCH---HH-HHHHh----CCCCE
Q 024121 64 DNNAVVEYSDVVVFSVKP----------QVVKDVAMQIRPLLS---RKKLLVSVAAGVKL---KD-LQEWT----GHSRF 122 (272)
Q Consensus 64 ~~~~~~~~aDivil~v~~----------~~~~~v~~~l~~~l~---~~~~iis~~~~~~~---~~-l~~~~----~~~~~ 122 (272)
+..+++.++|++|+|||. ..+.++.+.+.++++ ++++||.- +++++ +. ....+ ++..+
T Consensus 90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~e-STVppGtte~~~~~~l~~~~~~~~f 168 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVK-STVPPGTTEGLVARAVAEEAGGVKF 168 (444)
T ss_dssp SHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEEC-SCCCTTTTTTHHHHHHHTTTTTCCC
T ss_pred CHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEe-CCCCCchHHHHHHHHHHHhCCCCCc
Confidence 778889999999999952 135667777776664 46677732 33332 22 22222 22222
Q ss_pred -EEEccC-----chhhh-cCCceEEEeCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHH---HHHHHHH
Q 024121 123 -IRVMPN-----TPSAV-GEAATVMSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYI---FLAIEAL 191 (272)
Q Consensus 123 -~~~~p~-----~~~~~-~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~---~~~~~~l 191 (272)
+...|- ..... ..-.-++..+ .++...+.+.++++.+... +..+. ....++++..+.|. ..+++.+
T Consensus 169 ~v~~~PErl~eG~a~~d~~~~~riViG~--~~~~a~~~~~~ly~~~~~~~~~~~~-~~AE~~Kl~eN~~ravnIa~~NEl 245 (444)
T 3vtf_A 169 SVASNPEFLREGSALEDFFKPDRIVIGA--GDERAASFLLDVYKAVDAPKLVMKP-REAELVKYASNVFLALKISFANEV 245 (444)
T ss_dssp EEEECCCCCCTTSHHHHHHSCSCEEEEE--SSHHHHHHHHHHTTTSCSCEEEECH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCcccccCCccccccccCCcEEEcC--CCHHHHHHHHHHHhccCCCEEEech-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223232 11111 1111123222 2567788899999988755 44443 23445555533333 2456667
Q ss_pred HHHHHHcCCCHHHHHHHHH
Q 024121 192 ADGGVAAGLPRELALGLAS 210 (272)
Q Consensus 192 ~~~~~~~Gl~~~~a~~~~~ 210 (272)
...+.+.|+|..+..+.+.
T Consensus 246 a~ice~~GiDv~eV~~a~~ 264 (444)
T 3vtf_A 246 GLLAKRLGVDTYRVFEAVG 264 (444)
T ss_dssp HHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHhc
Confidence 7778899999888766653
No 93
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.34 E-value=2.9e-12 Score=111.36 Aligned_cols=108 Identities=16% Similarity=0.219 Sum_probs=85.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHH-hCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-c
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVA-KSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-V 83 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~-~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~ 83 (272)
.....++|||||+|+||+++++.+. ..|+ +|.+| +|++++.+...+.|+....+..+++++||+|++++|.. .
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~ 233 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGM----KLVYY-DVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKL 233 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCC----EEEEE-CSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGG
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCC----EEEEE-CCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChH
Confidence 4456789999999999999999999 9998 99999 99877665555567776667788899999999999875 3
Q ss_pred HHHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 84 VKDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 84 ~~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
.+.++ .++.+.++++.++|+++.+ +..+.+.+.+.
T Consensus 234 t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~ 271 (348)
T 2w2k_A 234 THHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALK 271 (348)
T ss_dssp GTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 55555 2455567889999988766 55567777665
No 94
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.33 E-value=2e-12 Score=111.68 Aligned_cols=107 Identities=15% Similarity=0.262 Sum_probs=83.6
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|.||+++++.+...|+ +|.+| +|++++.+.+.+.|+... +..++++++|+|++++|.. ..
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t 224 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGV----QRFLY-TGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPAT 224 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTC----CEEEE-ESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTT
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-CCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHH
Confidence 34567899999999999999999999999 99999 998766666666677765 7788899999999999865 34
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
+.++ .++.+.++++.++|+++.+ +..+.+.+.+.
T Consensus 225 ~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~ 261 (330)
T 2gcg_A 225 EGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALA 261 (330)
T ss_dssp TTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 4444 3455667889999988766 45566666554
No 95
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.28 E-value=6.6e-12 Score=107.88 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=82.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r-~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
....++|||||+|+||+++++.+...|+ +|.+| +| ++++ ....+.|+....+.++++++||+|++++|.. ..
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~-~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t 216 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDM----DIDYF-DTHRASS-SDEASYQATFHDSLDSLLSVSQFFSLNAPSTPET 216 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSCCCH-HHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-CCCCcCh-hhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHH
Confidence 4556899999999999999999999998 99999 99 8765 3444568776657889999999999999864 35
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
..++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 217 ~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~ 253 (320)
T 1gdh_A 217 RYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALE 253 (320)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 5444 3355667899999998766 45566666664
No 96
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.28 E-value=3.4e-12 Score=107.55 Aligned_cols=121 Identities=12% Similarity=0.195 Sum_probs=88.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~~ 86 (272)
...++|+|||+|.||.+++..|.+.|+ +|++| +|++++++.+.+ .|+.+..+..+.++++|+||.|+|+....+
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~----~V~v~-~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~ 201 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA----KVFLW-NRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDE 201 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC----EEEEE-CSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTT
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC----EEEEE-ECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCC
Confidence 356899999999999999999999998 99999 999999888876 577766677788899999999998775432
Q ss_pred HHHHh-chhcCCCCEEEEEcCCCCHHHHHHHhCCCCEEEEccCchhhhcCC
Q 024121 87 VAMQI-RPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEA 136 (272)
Q Consensus 87 v~~~l-~~~l~~~~~iis~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~g 136 (272)
+...+ .+.++++++++|+.. .....++.... ..++++|+.+..++++
T Consensus 202 ~~~~i~~~~l~~g~~viDv~~-~~t~ll~~a~~--~g~~~v~g~~mlv~q~ 249 (275)
T 2hk9_A 202 DPEIFNYDLIKKDHVVVDIIY-KETKLLKKAKE--KGAKLLDGLPMLLWQG 249 (275)
T ss_dssp CCCSSCGGGCCTTSEEEESSS-SCCHHHHHHHH--TTCEEECSHHHHHHHH
T ss_pred CCCCCCHHHcCCCCEEEEcCC-ChHHHHHHHHH--CcCEEECCHHHHHHHH
Confidence 11112 245678999999866 44444443322 1235677777665543
No 97
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.27 E-value=6e-12 Score=108.82 Aligned_cols=105 Identities=19% Similarity=0.242 Sum_probs=81.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-HH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-VK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~~ 85 (272)
....++|||||+|.||.++++.+...|+ +|.+| +|++++ +...+.|+.. .+..+++++||+|++|+|... .+
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~----~V~~~-d~~~~~-~~~~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~ 219 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNM----RILYY-SRTRKE-EVERELNAEF-KPLEDLLRESDFVVLAVPLTRETY 219 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCH-HHHHHHCCEE-CCHHHHHHHCSEEEECCCCCTTTT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCC----EEEEE-CCCcch-hhHhhcCccc-CCHHHHHhhCCEEEECCCCChHHH
Confidence 4566899999999999999999999999 99999 998876 4444567765 477888999999999998764 55
Q ss_pred HHH-HHhchhcCCCCEEEEEcCCCC--HHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAGVK--LKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~~~--~~~l~~~~~ 118 (272)
.++ .++.+.++++.++|+++.|.. .+.+.+.+.
T Consensus 220 ~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~ 255 (334)
T 2dbq_A 220 HLINEERLKLMKKTAILINIARGKVVDTNALVKALK 255 (334)
T ss_dssp TCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 555 345566789999998876643 345655554
No 98
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.24 E-value=7.6e-12 Score=107.87 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=80.1
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|+||+++++.+...|+ +|.+| +|++++. .|+....+.++++++||+|++++|.. ..
T Consensus 160 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~----~V~~~-dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t 229 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGRIGLAVAERAEAFDC----PISYF-SRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPET 229 (333)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHTTTC----CEEEE-CSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-CCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHH
Confidence 34567899999999999999999999999 99999 9987643 26665667888899999999999975 45
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCCCC--HHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAGVK--LKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~~~--~~~l~~~~~ 118 (272)
+.++ .+..+.++++.++|+++.|.. .+.+.+.+.
T Consensus 230 ~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~ 266 (333)
T 3ba1_A 230 THIINREVIDALGPKGVLINIGRGPHVDEPELVSALV 266 (333)
T ss_dssp TTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 5555 334456788999999876643 355655554
No 99
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.23 E-value=2e-11 Score=106.55 Aligned_cols=108 Identities=17% Similarity=0.222 Sum_probs=84.2
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCc-EEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-c
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDR-ICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-V 83 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~-V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~ 83 (272)
.....++|||||+|+||.++++.+...|+ + |.+| +|++.+.+...+.|+....+.++++++||+|++++|.. .
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~----~~V~~~-d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~ 234 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNP----KELLYY-DYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAG 234 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCC----SEEEEE-CSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTT
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCC----cEEEEE-CCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChH
Confidence 34567899999999999999999999998 8 9999 99876665556678776668889999999999999875 4
Q ss_pred HHHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 84 VKDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 84 ~~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
.+.++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 235 t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 235 TKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 44444 3345667899999988765 34456666654
No 100
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.23 E-value=2.1e-11 Score=104.38 Aligned_cols=106 Identities=17% Similarity=0.247 Sum_probs=80.6
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-H
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-V 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~ 84 (272)
.....++|||||+|+||+++++.+...|+ +|.+| +|++++. ...+.|+.. .+.+++++++|+|++++|... .
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~-~~~~~g~~~-~~l~ell~~aDvVvl~~P~~~~t 210 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGM----KVLAY-DILDIRE-KAEKINAKA-VSLEELLKNSDVISLHVTVSKDA 210 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTC----EEEEE-CSSCCHH-HHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTS
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-CCCcchh-HHHhcCcee-cCHHHHHhhCCEEEEeccCChHH
Confidence 34566899999999999999999999999 99999 9988764 345577765 478889999999999998543 4
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
+.++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 211 ~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 211 KPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp CCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred HHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 3333 3344557889999988665 33456666664
No 101
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.23 E-value=2.6e-11 Score=106.39 Aligned_cols=107 Identities=13% Similarity=0.178 Sum_probs=83.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+++++.+...|+ +|.+| +|++.+.+...+.|+....+.++++++||+|++++|.. ..+
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~----~V~~~-d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~ 262 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDV----HLHYT-DRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETE 262 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC----EEEEE-CSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTT
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCC----EEEEE-cCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHH
Confidence 4567899999999999999999999998 99999 99875555555578776667889999999999999853 445
Q ss_pred HHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
.++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 263 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 298 (393)
T 2nac_A 263 HMINDETLKLFKRGAYIVNTARGKLCDRDAVARALE 298 (393)
T ss_dssp TCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHH
Confidence 555 34556678999999887653 3455666664
No 102
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.22 E-value=2.8e-11 Score=104.35 Aligned_cols=103 Identities=16% Similarity=0.212 Sum_probs=69.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCc-ccH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~-~~~ 84 (272)
.....++|||||+|+||+++|+++...|+ +|.+| +|++++ ..+.....+..+++++||+|++++|. ...
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~-----~~~~~~~~sl~ell~~aDvVil~vP~t~~t 236 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM----SVRYW-NRSTLS-----GVDWIAHQSPVDLARDSDVLAVCVAASAAT 236 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSCCT-----TSCCEECSSHHHHHHTCSEEEECC------
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-cCCccc-----ccCceecCCHHHHHhcCCEEEEeCCCCHHH
Confidence 34567899999999999999999999999 99999 998754 23455567889999999999999984 455
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCCCCH--HHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~ 118 (272)
+.++ .+..+.++++.++|+++.|-.. +.+.+.+.
T Consensus 237 ~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 237 QNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALK 273 (340)
T ss_dssp ----CHHHHHHTTTTCEEEECSCC-------------
T ss_pred HHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 6666 4556678899999998766433 34444443
No 103
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.22 E-value=1.6e-11 Score=106.40 Aligned_cols=108 Identities=17% Similarity=0.241 Sum_probs=84.1
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|+||+++++.+...|+ +|.+| +|++...+...+.|+....+.++++++||+|++++|.. ..
T Consensus 160 ~~l~gktvGIIG~G~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t 234 (351)
T 3jtm_A 160 YDLEGKTIGTVGAGRIGKLLLQRLKPFGC----NLLYH-DRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKT 234 (351)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCC----EEEEE-CSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTT
T ss_pred ccccCCEEeEEEeCHHHHHHHHHHHHCCC----EEEEe-CCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHH
Confidence 34567899999999999999999999999 99999 99876666666678877778999999999999999853 44
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
..++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 235 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 235 RGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 4333 3444557899999988654 34456666654
No 104
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.21 E-value=2.3e-11 Score=105.42 Aligned_cols=106 Identities=18% Similarity=0.182 Sum_probs=81.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+++++++...|+ +|.+| +|++++. .....|+....+.++++++||+|++++|.. ..+
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~----~V~~~-d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~ 238 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGF----NVLFY-DPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNH 238 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCT
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCC----EEEEE-CCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHH
Confidence 4567899999999999999999999999 99999 9976542 223467766668889999999999999864 455
Q ss_pred HHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
.++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 239 ~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 239 HLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp TSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHH
Confidence 555 34455678999999987663 3455666554
No 105
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.20 E-value=1.6e-11 Score=106.03 Aligned_cols=105 Identities=19% Similarity=0.255 Sum_probs=80.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|.||+++++.+...|+ +|.+| +|++++ +...+.|+... +..+++++||+|++|+|.. ..
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~----~V~~~-d~~~~~-~~~~~~g~~~~-~l~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGV----KLYYW-SRHRKV-NVEKELKARYM-DIDELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTC----EEEEE-CSSCCH-HHHHHHTEEEC-CHHHHHHHCSEEEECCCCCTTT
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-CCCcch-hhhhhcCceec-CHHHHHhhCCEEEEcCCCChHH
Confidence 34567899999999999999999999999 99999 998876 44445677654 7788889999999999876 55
Q ss_pred HHHHH-HhchhcCCCCEEEEEcCCCC--HHHHHHHhC
Q 024121 85 KDVAM-QIRPLLSRKKLLVSVAAGVK--LKDLQEWTG 118 (272)
Q Consensus 85 ~~v~~-~l~~~l~~~~~iis~~~~~~--~~~l~~~~~ 118 (272)
+.++. ++.+.++++ ++|+++.+.. .+.+.+.+.
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~ 250 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIK 250 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHH
Confidence 55553 345567889 9998876543 334555554
No 106
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.19 E-value=2.9e-11 Score=103.22 Aligned_cols=105 Identities=19% Similarity=0.237 Sum_probs=80.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-HH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-VK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~~ 85 (272)
....++|||||+|+||+++++.+...|+ +|.+| +|++++ +...+.|+... +.++++++||+|++++|... .+
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~-~~~~~~g~~~~-~l~ell~~aDvV~l~~p~~~~t~ 211 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANALGM----NILLY-DPYPNE-ERAKEVNGKFV-DLETLLKESDVVTIHVPLVESTY 211 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCH-HHHHHTTCEEC-CHHHHHHHCSEEEECCCCSTTTT
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHCCC----EEEEE-CCCCCh-hhHhhcCcccc-CHHHHHhhCCEEEEecCCChHHh
Confidence 4556899999999999999999999999 99999 998866 44555777653 77888999999999998643 44
Q ss_pred HHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
.++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 212 ~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~ 247 (307)
T 1wwk_A 212 HLINEERLKLMKKTAILINTSRGPVVDTNALVKALK 247 (307)
T ss_dssp TCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHH
Confidence 444 23445578999999886653 3445555553
No 107
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.19 E-value=3.2e-11 Score=104.65 Aligned_cols=107 Identities=15% Similarity=0.174 Sum_probs=81.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|.||+++|+.+...|+ +|.+| +|++. .+...+.|+....+.++++++||+|++++|.. ..
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t 229 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGM----NVLVW-GRENS-KERARADGFAVAESKDALFEQSDVLSVHLRLNDET 229 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTT
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCC----EEEEE-CCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHH
Confidence 34456899999999999999999999999 99999 99863 34455678887778899999999999999854 34
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
+.++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 230 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 266 (352)
T 3gg9_A 230 RSIITVADLTRMKPTALFVNTSRAELVEENGMVTALN 266 (352)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHH
T ss_pred HHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHH
Confidence 4443 34456678999999886543 3445555553
No 108
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.16 E-value=5.3e-11 Score=101.98 Aligned_cols=89 Identities=17% Similarity=0.193 Sum_probs=72.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cC--ceeecCchhhhccCCEEEEeeCcccH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IG--VKVLSDNNAVVEYSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~-~g--~~~~~~~~~~~~~aDivil~v~~~~~ 84 (272)
+.++|+|||+|.||.+++.+|.+. |+ .+|.+| ||++++.+++.+ .+ +..+.+..++++++|+|++|+|..
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~---~~V~v~-dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~-- 207 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSF---KEVRIW-NRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT-- 207 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCC---SEEEEE-CSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS--
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCC---cEEEEE-cCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC--
Confidence 568999999999999999999886 64 389999 999999998877 36 777788889999999999999852
Q ss_pred HHHHHHhchhcCCCCEEEEEc
Q 024121 85 KDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~ 105 (272)
..++.. +.++++++|+++.
T Consensus 208 ~~v~~~--~~l~~g~~vi~~g 226 (312)
T 2i99_A 208 EPILFG--EWVKPGAHINAVG 226 (312)
T ss_dssp SCCBCG--GGSCTTCEEEECC
T ss_pred CcccCH--HHcCCCcEEEeCC
Confidence 333322 4578898888763
No 109
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.16 E-value=2.7e-11 Score=104.39 Aligned_cols=106 Identities=14% Similarity=0.237 Sum_probs=81.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+++++.+...|+ +|.+| +|++.+.+.....|+... +..+++++||+|++++|.. ...
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~ 215 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGA----TLQYH-EAKALDTQTEQRLGLRQV-ACSELFASSDFILLALPLNADTL 215 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCC----EEEEE-CSSCCCHHHHHHHTEEEC-CHHHHHHHCSEEEECCCCSTTTT
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-CCCCCcHhHHHhcCceeC-CHHHHHhhCCEEEEcCCCCHHHH
Confidence 3456899999999999999999999999 99999 998755555555677654 7889999999999999853 344
Q ss_pred HHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 216 ~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 251 (330)
T 4e5n_A 216 HLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALE 251 (330)
T ss_dssp TCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 444 3455667899999988654 34456666554
No 110
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.16 E-value=1.8e-11 Score=103.38 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=77.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCc-ccHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVKD 86 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~-~~~~~ 86 (272)
...++|||||+|+||+++++.+...|+ +|.+| +|++++.+ .+....+.++++++||+|++++|. ...+.
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~-----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~ 189 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAFGM----RVIAY-TRSSVDQN-----VDVISESPADLFRQSDFVLIAIPLTDKTRG 189 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTC----EEEEE-CSSCCCTT-----CSEECSSHHHHHHHCSEEEECCCCCTTTTT
T ss_pred eecchheeeccCchhHHHHHHHHhhCc----EEEEE-eccccccc-----cccccCChHHHhhccCeEEEEeeccccchh
Confidence 456899999999999999999999999 99999 99875432 244556888999999999999985 34444
Q ss_pred HH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 87 VA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 87 v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 190 li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~ 224 (290)
T 3gvx_A 190 MVNSRLLANARKNLTIVNVARADVVSKPDMIGFLK 224 (290)
T ss_dssp CBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hhhHHHHhhhhcCceEEEeehhcccCCcchhhhhh
Confidence 44 34556688999999986543 3455655553
No 111
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.16 E-value=6.6e-11 Score=102.02 Aligned_cols=106 Identities=13% Similarity=0.134 Sum_probs=81.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|+||+++|+.+...|+ +|.+| +|++++ ....+.|+.. .+.++++++||+|++++|.. ..
T Consensus 161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t 233 (335)
T 2g76_A 161 TELNGKTLGILGLGRIGREVATRMQSFGM----KTIGY-DPIISP-EVSASFGVQQ-LPLEEIWPLCDFITVHTPLLPST 233 (335)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSSCH-HHHHHTTCEE-CCHHHHGGGCSEEEECCCCCTTT
T ss_pred cCCCcCEEEEEeECHHHHHHHHHHHHCCC----EEEEE-CCCcch-hhhhhcCcee-CCHHHHHhcCCEEEEecCCCHHH
Confidence 34566899999999999999999999998 99999 998765 3445577764 47889999999999999865 35
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
+.++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 234 ~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~ 270 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQ 270 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHH
Confidence 5555 34556678999999887653 3345555554
No 112
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.15 E-value=5.1e-11 Score=102.97 Aligned_cols=106 Identities=14% Similarity=0.179 Sum_probs=79.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|+||+++|+.+...|+ +|.+| +|++.+.+.. .|+....+.++++++||+|++++|.. ..
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~--~g~~~~~~l~ell~~sDvV~l~~Plt~~T 241 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGL----AIHYH-NRTRLSHALE--EGAIYHDTLDSLLGASDIFLIAAPGRPEL 241 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTC----EEEEE-CSSCCCHHHH--TTCEECSSHHHHHHTCSEEEECSCCCGGG
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCC----EEEEE-CCCCcchhhh--cCCeEeCCHHHHHhhCCEEEEecCCCHHH
Confidence 34456899999999999999999999999 99999 9986443322 27776678899999999999999853 34
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
..++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 242 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 278 (345)
T 4g2n_A 242 KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALR 278 (345)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 4444 3344567899999988654 34456666554
No 113
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=99.15 E-value=2.2e-10 Score=98.10 Aligned_cols=95 Identities=22% Similarity=0.311 Sum_probs=72.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c---------Ccee-ecCchhhhccCCEEEEee
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I---------GVKV-LSDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~---------g~~~-~~~~~~~~~~aDivil~v 79 (272)
|||+|||+|.||++++..|.++|. ..+|++| +|++++++.+.. . .+.+ ..+. +.++++|+||+|+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~--~~~V~l~-d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav 77 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV--ADDYVFI-DANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTL 77 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--CSEEEEE-CSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCEEEEE-cCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEec
Confidence 799999999999999999999982 1299999 999988766543 1 2344 4555 6788999999999
Q ss_pred Cccc--------------------HHHHHHHhchhcCCCCEEEEEcCCCCH
Q 024121 80 KPQV--------------------VKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (272)
Q Consensus 80 ~~~~--------------------~~~v~~~l~~~l~~~~~iis~~~~~~~ 110 (272)
++.. +.++++.+.++. ++.+++..+++...
T Consensus 78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 8654 467777777764 67777777776554
No 114
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.11 E-value=7.6e-11 Score=98.58 Aligned_cols=115 Identities=12% Similarity=0.132 Sum_probs=81.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHH--
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVK-- 85 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~-- 85 (272)
.. +|+|||+|.||.+++..|.+.|+ +|++| +|++++++.+.+ .+.. ..+..++ +++|+||+|+|+....
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~----~v~v~-~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~ 187 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGL----EVWVW-NRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPS 187 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTT
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCC
Confidence 45 89999999999999999999998 89999 999998887766 4655 4567777 8999999999877432
Q ss_pred -HHHHHhchhcCCCCEEEEEcCCCCHH-HHHHHhCCCCEEEEccCchhhhcC
Q 024121 86 -DVAMQIRPLLSRKKLLVSVAAGVKLK-DLQEWTGHSRFIRVMPNTPSAVGE 135 (272)
Q Consensus 86 -~v~~~l~~~l~~~~~iis~~~~~~~~-~l~~~~~~~~~~~~~p~~~~~~~~ 135 (272)
..+. .+.++++++++++..+ +.+ .+.+.... ..++++++.+..+.+
T Consensus 188 ~~~l~--~~~l~~g~~viD~~~~-p~~t~l~~~a~~-~g~~~v~g~~mlv~q 235 (263)
T 2d5c_A 188 ASPLP--AELFPEEGAAVDLVYR-PLWTRFLREAKA-KGLKVQTGLPMLAWQ 235 (263)
T ss_dssp CCSSC--GGGSCSSSEEEESCCS-SSSCHHHHHHHH-TTCEEECSHHHHHHH
T ss_pred CCCCC--HHHcCCCCEEEEeecC-CcccHHHHHHHH-CcCEEECcHHHHHHH
Confidence 2221 3456788999987543 221 23333321 123556776665544
No 115
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.11 E-value=1.5e-10 Score=99.83 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=78.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+++|+.+...|+ +|.+| +|+++.... +.|+... +.++++++||+|++++|.. ...
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~----~V~~~-d~~~~~~~~--~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~ 209 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGM----KVLCY-DVVKREDLK--EKGCVYT-SLDELLKESDVISLHVPYTKETH 209 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCHHHH--HTTCEEC-CHHHHHHHCSEEEECCCCCTTTT
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcC----EEEEE-CCCcchhhH--hcCceec-CHHHHHhhCCEEEEeCCCChHHH
Confidence 3456899999999999999999999999 99999 998765422 4576654 5889999999999999853 343
Q ss_pred HHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 210 ~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 245 (334)
T 2pi1_A 210 HMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp TCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 333 3444567899999988654 34566666665
No 116
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=99.10 E-value=8.5e-10 Score=82.65 Aligned_cols=96 Identities=15% Similarity=0.207 Sum_probs=69.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceee-cCc---h----hhhccCCEEEEee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVL-SDN---N----AVVEYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~-~~~---~----~~~~~aDivil~v 79 (272)
+.|+|.|+|+|.+|..++..|.+.|+ +|+++ +|++++.+.+.+ .++... .+. . ..+.++|+||+|+
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~----~v~~~-d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGH----DIVLI-DIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 45899999999999999999999999 99999 999998887775 466432 221 1 1256899999999
Q ss_pred CcccHHHHHHHhchhcCCCCEEEEEcCCCCH
Q 024121 80 KPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (272)
Q Consensus 80 ~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~ 110 (272)
|++.....+..+.+.++++++++.. ++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~-~~~~~ 107 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGINKTIARI-SEIEY 107 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEC-SSTTH
T ss_pred CCchHHHHHHHHHHHcCCCEEEEEe-cCHhH
Confidence 8876655555555556667666643 44443
No 117
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.10 E-value=5.3e-11 Score=101.37 Aligned_cols=101 Identities=11% Similarity=0.141 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+++|+++...|+ +|.+| +|+++ +. +.....+.++++++||+|++++|.. ..+
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~-dr~~~--~~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~ 189 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGA----QVRGF-SRTPK--EG----PWRFTNSLEEALREARAAVCALPLNKHTR 189 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTC----EEEEE-CSSCC--CS----SSCCBSCSHHHHTTCSEEEECCCCSTTTT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-CCCcc--cc----CcccCCCHHHHHhhCCEEEEeCcCchHHH
Confidence 3566899999999999999999999999 99999 99875 11 3434457889999999999999875 455
Q ss_pred HHHH-HhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 86 DVAM-QIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 86 ~v~~-~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
.++. +..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 190 ~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~ 225 (303)
T 1qp8_A 190 GLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILK 225 (303)
T ss_dssp TCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 5553 4556788999999986653 3345655553
No 118
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.09 E-value=5.9e-10 Score=94.66 Aligned_cols=115 Identities=17% Similarity=0.278 Sum_probs=82.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee--cCchhhhccCCEEEEeeCcccH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL--SDNNAVVEYSDVVVFSVKPQVV 84 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~--~~~~~~~~~aDivil~v~~~~~ 84 (272)
....++|+|||+|.||..+++.+...|. +|++| +|++++.+.+.+.|+... .+..++++++|+|++++|...+
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i 226 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA----KVKVG-ARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVV 226 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCB
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHh
Confidence 4467899999999999999999999998 99999 999988776666777643 4567778999999999997654
Q ss_pred H-HHHHHhchhcCCCCEEEEEcCC---CCHHHHHHHhCCCCEEEEccCchhhh
Q 024121 85 K-DVAMQIRPLLSRKKLLVSVAAG---VKLKDLQEWTGHSRFIRVMPNTPSAV 133 (272)
Q Consensus 85 ~-~v~~~l~~~l~~~~~iis~~~~---~~~~~l~~~~~~~~~~~~~p~~~~~~ 133 (272)
. +.+ ..++++.++|++..+ +..+. .+..+ . .+..+|+.|..+
T Consensus 227 ~~~~l----~~mk~~~~lin~ar~~~~~~~~~-a~~~G-v-~~~~~~~l~~~v 272 (293)
T 3d4o_A 227 TANVL----AEMPSHTFVIDLASKPGGTDFRY-AEKRG-I-KALLVPGLPGIV 272 (293)
T ss_dssp CHHHH----HHSCTTCEEEECSSTTCSBCHHH-HHHHT-C-EEEECCCHHHHH
T ss_pred CHHHH----HhcCCCCEEEEecCCCCCCCHHH-HHHCC-C-EEEECCCCCccc
Confidence 2 233 345788999988642 22311 12222 2 333467777654
No 119
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.08 E-value=3e-10 Score=98.76 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=79.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+++|+.+...|+ +|.+| +|++ +.+...+.|+.. .+.++++++||+|++++|.. ..+
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~----~V~~~-d~~~-~~~~~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~ 245 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRA----RIRVF-DPWL-PRSMLEENGVEP-ASLEDVLTKSDFIFVVAAVTSENK 245 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCC----EEEEE-CSSS-CHHHHHHTTCEE-CCHHHHHHSCSEEEECSCSSCC--
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCC----EEEEE-CCCC-CHHHHhhcCeee-CCHHHHHhcCCEEEEcCcCCHHHH
Confidence 3456899999999999999999999999 99999 9985 334445577765 47899999999999999854 455
Q ss_pred HHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
.++ .+....++++.++|+++-| +..+.+.+.+.
T Consensus 246 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 281 (365)
T 4hy3_A 246 RFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVS 281 (365)
T ss_dssp -CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHH
T ss_pred hhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHH
Confidence 555 3455667899999988654 34556666654
No 120
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.07 E-value=7.1e-11 Score=100.99 Aligned_cols=100 Identities=18% Similarity=0.249 Sum_probs=76.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||.++++++...|+ +|++| +|++++.. +. ..+..+++++||+|++++|.. ...
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~~------~~-~~~l~ell~~aDvV~l~~p~~~~t~ 208 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGM----RVVYH-ARTPKPLP------YP-FLSLEELLKEADVVSLHTPLTPETH 208 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCSSS------SC-BCCHHHHHHHCSEEEECCCCCTTTT
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCC----EEEEE-CCCCcccc------cc-cCCHHHHHhhCCEEEEeCCCChHHH
Confidence 4566899999999999999999999999 99999 99876542 22 356788899999999999876 455
Q ss_pred HHHH-HhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 86 DVAM-QIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 86 ~v~~-~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
.++. +..+.++++.++|+++.+- ..+.+.+.+.
T Consensus 209 ~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 209 RLLNRERLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp TCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred hhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 5553 3445678999999887653 3345666555
No 121
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.06 E-value=7.2e-11 Score=101.29 Aligned_cols=106 Identities=12% Similarity=0.211 Sum_probs=77.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|+||+++|+.+...|+ +|.+| +|+++..+.+.. .....+.++++++||+|++++|.. ..
T Consensus 133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~t 205 (324)
T 3evt_A 133 STLTGQQLLIYGTGQIGQSLAAKASALGM----HVIGV-NTTGHPADHFHE--TVAFTATADALATANFIVNALPLTPTT 205 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESSCCCCTTCSE--EEEGGGCHHHHHHCSEEEECCCCCGGG
T ss_pred ccccCCeEEEECcCHHHHHHHHHHHhCCC----EEEEE-CCCcchhHhHhh--ccccCCHHHHHhhCCEEEEcCCCchHH
Confidence 34556899999999999999999999999 99999 998754332211 122357889999999999999853 44
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
..++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 206 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~ 242 (324)
T 3evt_A 206 HHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALD 242 (324)
T ss_dssp TTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHH
Confidence 4444 3445567899999988654 34556666654
No 122
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.04 E-value=9.9e-10 Score=93.55 Aligned_cols=94 Identities=13% Similarity=0.255 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee--cCchhhhccCCEEEEeeCccc
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL--SDNNAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~--~~~~~~~~~aDivil~v~~~~ 83 (272)
.....++|+|||+|.||.++++.+...|. +|++| +|++++.+.+.+.|+... .+..++++++|+|++++|+..
T Consensus 153 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~ 227 (300)
T 2rir_A 153 YTIHGSQVAVLGLGRTGMTIARTFAALGA----NVKVG-ARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMI 227 (300)
T ss_dssp SCSTTSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCC
T ss_pred CCCCCCEEEEEcccHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhh
Confidence 34567899999999999999999999998 99999 999988777766776542 466788899999999999865
Q ss_pred HHHHHHHhchhcCCCCEEEEEcCC
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
+.+ .....++++.++|++..+
T Consensus 228 i~~---~~~~~mk~g~~lin~a~g 248 (300)
T 2rir_A 228 LNQ---TVLSSMTPKTLILDLASR 248 (300)
T ss_dssp BCH---HHHTTSCTTCEEEECSST
T ss_pred hCH---HHHHhCCCCCEEEEEeCC
Confidence 432 123446789999988653
No 123
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=99.04 E-value=1.4e-10 Score=87.94 Aligned_cols=88 Identities=17% Similarity=0.298 Sum_probs=68.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCce--eecCchhhhccCCEEEEeeCcccHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVK--VLSDNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~--~~~~~~~~~~~aDivil~v~~~~~~~ 86 (272)
.++|+|||+|.||..++..|.+.|+ +|++| +|++++.+.+.+ .+.. ...+..++++++|+||.|+|....
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~----~v~v~-~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~-- 93 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQY----KVTVA-GRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTP-- 93 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTC----EEEEE-ESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-cCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCc--
Confidence 5799999999999999999999888 89999 999999888765 5654 345667888999999999986531
Q ss_pred HHHHhchhcCCCCEEEEEcC
Q 024121 87 VAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~ 106 (272)
++. ...++++.+++++..
T Consensus 94 ~~~--~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 94 IVE--ERSLMPGKLFIDLGN 111 (144)
T ss_dssp SBC--GGGCCTTCEEEECCS
T ss_pred Eee--HHHcCCCCEEEEccC
Confidence 111 134567888887643
No 124
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=99.04 E-value=1.1e-09 Score=93.69 Aligned_cols=101 Identities=11% Similarity=0.147 Sum_probs=72.8
Q ss_pred CCCCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCc
Q 024121 6 IPAESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~-la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~ 81 (272)
++|+++||||||+|.||.. ++..|.+. ++ ++. ++ +|++++++.+.+ .|+..+.+.++++++.|+|++|+|+
T Consensus 2 ~~M~~~~igiIG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~ 76 (308)
T 3uuw_A 2 NAMKNIKMGMIGLGSIAQKAYLPILTKSERF----EFVGAF-TPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSST 76 (308)
T ss_dssp ---CCCEEEEECCSHHHHHHTHHHHTSCSSS----EEEEEE-CSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCG
T ss_pred CccccCcEEEEecCHHHHHHHHHHHHhCCCe----EEEEEE-CCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCc
Confidence 3567789999999999996 88888763 44 666 77 999999988876 6776678889998899999999999
Q ss_pred ccHHHHHHHhchhcCCCCEEE-EEcCCCCHHHHH
Q 024121 82 QVVKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQ 114 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~ 114 (272)
....+++.... ..|+.|+ .-.-+.+.+..+
T Consensus 77 ~~h~~~~~~al---~~gk~vl~EKP~~~~~~~~~ 107 (308)
T 3uuw_A 77 ETHYEIIKILL---NLGVHVYVDKPLASTVSQGE 107 (308)
T ss_dssp GGHHHHHHHHH---HTTCEEEECSSSSSSHHHHH
T ss_pred HhHHHHHHHHH---HCCCcEEEcCCCCCCHHHHH
Confidence 88777665543 3455444 212234444443
No 125
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=99.04 E-value=6.3e-11 Score=98.28 Aligned_cols=121 Identities=13% Similarity=0.102 Sum_probs=87.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHH--
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVK-- 85 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~-- 85 (272)
.. +++|||+|.||.+++..|.+.|. .+|+++ +|++++++++.+ .+.....+..+.+.++|+||.|+|.....
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~---~~I~v~-nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~ 182 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGV---KDIWVV-NRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEE 182 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTC---CCEEEE-ESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCC
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCC---CEEEEE-eCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCC
Confidence 45 89999999999999999999986 379999 999999887765 33333455667788999999999743111
Q ss_pred HHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC-CCCEEEEccCchhhhcCCceE
Q 024121 86 DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATV 139 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~ 139 (272)
..+. ...++++++++|+..+ +...+++... +++ +++|+.+..+.++...
T Consensus 183 ~~i~--~~~l~~~~~V~Divy~-~T~ll~~A~~~G~~--~~~~Gl~MLv~Qa~~a 232 (253)
T 3u62_A 183 LPVS--DDSLKNLSLVYDVIYF-DTPLVVKARKLGVK--HIIKGNLMFYYQAMEN 232 (253)
T ss_dssp CSCC--HHHHTTCSEEEECSSS-CCHHHHHHHHHTCS--EEECTHHHHHHHHHHH
T ss_pred CCCC--HHHhCcCCEEEEeeCC-CcHHHHHHHHCCCc--EEECCHHHHHHHHHHH
Confidence 1111 1235688999999877 6666655443 333 4789999888776543
No 126
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.03 E-value=4.5e-11 Score=102.21 Aligned_cols=102 Identities=19% Similarity=0.261 Sum_probs=76.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee---ecCchhhhccCCEEEEeeCcc-
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV---LSDNNAVVEYSDVVVFSVKPQ- 82 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~---~~~~~~~~~~aDivil~v~~~- 82 (272)
....++|||||+|+||+++|+.+...|+ +|.+| +|+++..+ ++.. ..+.++++++||+|++++|..
T Consensus 136 ~l~g~tvGIiG~G~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~-----~~~~~~~~~~l~ell~~aDiV~l~~Plt~ 205 (315)
T 3pp8_A 136 TREEFSVGIMGAGVLGAKVAESLQAWGF----PLRCW-SRSRKSWP-----GVESYVGREELRAFLNQTRVLINLLPNTA 205 (315)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHTTTC----CEEEE-ESSCCCCT-----TCEEEESHHHHHHHHHTCSEEEECCCCCG
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-cCCchhhh-----hhhhhcccCCHHHHHhhCCEEEEecCCch
Confidence 4456899999999999999999999999 99999 99876432 2221 146788999999999999853
Q ss_pred cHHHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 83 VVKDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 83 ~~~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
..+.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 206 ~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~ 244 (315)
T 3pp8_A 206 QTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALD 244 (315)
T ss_dssp GGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHH
Confidence 455555 4455668899999988654 34456666554
No 127
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.02 E-value=2.8e-10 Score=98.27 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=77.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+++++.+...|+ +|.+| +|++++. +.+ .+....+..+++++||+|++++|.. ..+
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~--~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~ 214 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGA----KVITY-DIFRNPE--LEK-KGYYVDSLDDLYKQADVISLHVPDVPANV 214 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCHH--HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGT
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-CCCcchh--HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHH
Confidence 3456899999999999999999999999 99999 9987654 222 2444447788899999999999854 344
Q ss_pred HHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
.++ ....+.++++.++|+++.| +..+.+.+.+.
T Consensus 215 ~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 215 HMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp TCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 444 2344557889999988654 34456666664
No 128
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.02 E-value=3e-09 Score=91.33 Aligned_cols=96 Identities=18% Similarity=0.299 Sum_probs=71.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeecCchhhhccCCEEEEeeCc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~aDivil~v~~ 81 (272)
|||+|||+|.||++++..|.+.|+ ..+|++| |+++++++.+.. . ...+..+..+.++++|+||+|++.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~--~~~V~l~-D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~aDvViiav~~ 77 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGF--AREMVLI-DVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGV 77 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--CSEEEEE-CSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCeEEEE-eCChHHHHHHHHHHHhhhhhcCCcEEEeCCHHHhCCCCEEEEccCC
Confidence 689999999999999999999886 3479999 999887766542 1 223322234668899999999975
Q ss_pred cc----------------HHHHHHHhchhcCCCCEEEEEcCCCCH
Q 024121 82 QV----------------VKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (272)
Q Consensus 82 ~~----------------~~~v~~~l~~~l~~~~~iis~~~~~~~ 110 (272)
.. +.++++++.++ .|+..++..++++..
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 78 PQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVVTNPVDV 121 (319)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcHHH
Confidence 32 46777777776 477777777776554
No 129
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.01 E-value=1.1e-10 Score=100.06 Aligned_cols=105 Identities=18% Similarity=0.173 Sum_probs=77.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+++|+.+...|+ +|.+| +|+++....+ .+.....+.++++++||+|++++|.. ..+
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~--~~~~~~~~l~ell~~aDvV~l~lPlt~~T~ 209 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHFGM----KVLGV-SRSGRERAGF--DQVYQLPALNKMLAQADVIVSVLPATRETH 209 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCCCTTC--SEEECGGGHHHHHHTCSEEEECCCCCSSST
T ss_pred ccccceEEEEEECHHHHHHHHHHHhCCC----EEEEE-cCChHHhhhh--hcccccCCHHHHHhhCCEEEEeCCCCHHHH
Confidence 4456899999999999999999999999 99999 9987433211 11222457789999999999999853 444
Q ss_pred HHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
.++ .+....++++.++|+++.|- ..+.+.+.+.
T Consensus 210 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 245 (324)
T 3hg7_A 210 HLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALR 245 (324)
T ss_dssp TSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHH
Confidence 444 34556678999999986553 4455666554
No 130
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=99.01 E-value=2.3e-09 Score=92.97 Aligned_cols=79 Identities=14% Similarity=0.246 Sum_probs=66.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhc--cCCEEEEeeCccc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKPQV 83 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDivil~v~~~~ 83 (272)
+++||||||+|.||..++..|.+. ++ ++. ++ +|++++++.+.+ .|+..+.+.+++++ +.|+|++|+|+..
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 77 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDL----ELVVIA-DPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTST 77 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTE----EEEEEE-CSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGG
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCc----EEEEEE-CCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchh
Confidence 457999999999999999999886 44 665 67 999999888776 68888889999988 8999999999987
Q ss_pred HHHHHHHhc
Q 024121 84 VKDVAMQIR 92 (272)
Q Consensus 84 ~~~v~~~l~ 92 (272)
..+++....
T Consensus 78 h~~~~~~al 86 (344)
T 3euw_A 78 HVDLITRAV 86 (344)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 766665543
No 131
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.01 E-value=4.9e-10 Score=84.26 Aligned_cols=95 Identities=23% Similarity=0.318 Sum_probs=72.4
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccH
Q 024121 9 ESFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~----G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~ 84 (272)
+..+|+|||+ |+||..++++|.+.|| +|+.+ |++.+.. .|+.+..+..|+.+..|++++++|++.+
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~----~V~~v-np~~~~i-----~G~~~~~s~~el~~~vDlvii~vp~~~v 82 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGF----EVLPV-NPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPPKVG 82 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTC----EEEEE-CTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCHHHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCC----EEEEe-CCCCCeE-----CCeeecCCHHHhCCCCCEEEEEeCHHHH
Confidence 4578999999 9999999999999999 87777 6654222 5888888899988899999999999999
Q ss_pred HHHHHHhchhcCCCCEEEEEcCCCCHHHHHHH
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEW 116 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~ 116 (272)
.++++++.. ...+.+|+. +++. .+++.+.
T Consensus 83 ~~v~~~~~~-~g~~~i~~~-~~~~-~~~l~~~ 111 (138)
T 1y81_A 83 LQVAKEAVE-AGFKKLWFQ-PGAE-SEEIRRF 111 (138)
T ss_dssp HHHHHHHHH-TTCCEEEEC-TTSC-CHHHHHH
T ss_pred HHHHHHHHH-cCCCEEEEc-CccH-HHHHHHH
Confidence 999988665 345555554 3444 3344333
No 132
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.01 E-value=5.6e-10 Score=98.57 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=78.7
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|+||+.+|+.+...|+ +|.+| ||+++.. ..++....+.++++++||+|++++|.. ..
T Consensus 141 ~el~gktlGiIGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 141 FEARGKKLGIIGYGHIGTQLGILAESLGM----YVYFY-DIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPST 211 (404)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTT
T ss_pred cccCCCEEEEEeECHHHHHHHHHHHHCCC----EEEEE-cCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHH
Confidence 34567899999999999999999999999 99999 9976431 123555568889999999999999864 44
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
+.++ .+....++++.++|+++.|- ..+.+.+.+.
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHH
Confidence 4444 33445678999999987654 3456666664
No 133
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.00 E-value=2.8e-09 Score=91.48 Aligned_cols=113 Identities=17% Similarity=0.296 Sum_probs=78.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH--HHH-Hc------Cceee-cCchhhhccCCEEEEe
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD--AFE-SI------GVKVL-SDNNAVVEYSDVVVFS 78 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~--~l~-~~------g~~~~-~~~~~~~~~aDivil~ 78 (272)
+.|||+|||+|.||++++..|...|+. .+|+++ +|++++++ .+. .. ...+. .+..+.++++|+||++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~--~~V~l~-d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~ 82 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIA--REIVLE-DIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVIT 82 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCC--SEEEEE-CSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEEC
Confidence 458999999999999999999998863 379999 99987765 221 12 22222 2134567899999999
Q ss_pred eCccc----------------HHHHHHHhchhcCCCCEEEEEcCCCCHH-HHHH---HhCCCCEEEE
Q 024121 79 VKPQV----------------VKDVAMQIRPLLSRKKLLVSVAAGVKLK-DLQE---WTGHSRFIRV 125 (272)
Q Consensus 79 v~~~~----------------~~~v~~~l~~~l~~~~~iis~~~~~~~~-~l~~---~~~~~~~~~~ 125 (272)
++... +.+++.++.++ .++.+|++.++++... .+.. .++..++++.
T Consensus 83 v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~ 148 (319)
T 1lld_A 83 AGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIATHVAQKLTGLPENQIFGS 148 (319)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHHHHHHHHhcCCCHHHEeec
Confidence 95332 23677777775 6888999888887663 3333 2444467654
No 134
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=99.00 E-value=2.2e-09 Score=82.34 Aligned_cols=100 Identities=12% Similarity=0.093 Sum_probs=70.5
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH-HcCceee-cCc------hhh-hccCCE
Q 024121 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE-SIGVKVL-SDN------NAV-VEYSDV 74 (272)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~-~~g~~~~-~~~------~~~-~~~aDi 74 (272)
+|.....++|.|+|+|.+|..+++.|.+.|+ +|+++ +|++++.+.+. +.|.... .+. .++ +.++|+
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~----~V~vi-d~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGH----SVVVV-DKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADM 87 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCE
Confidence 5666677899999999999999999999999 99999 99999887776 5565432 221 122 568999
Q ss_pred EEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 75 vil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
||+|++++.....+..+...+.+...++...++.
T Consensus 88 Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 88 VFAFTNDDSTNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp EEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred EEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 9999988766555544444434555666555543
No 135
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.99 E-value=3.8e-10 Score=97.45 Aligned_cols=102 Identities=15% Similarity=0.212 Sum_probs=75.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKD 86 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~~ 86 (272)
...++|||||+|+||+++|+.+...|+ +|.+| +|+++.. .+.++.. .+.++++++||+|++++|.. ....
T Consensus 146 l~gktvgIiGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~~~---~~~~~~~-~~l~ell~~aDvV~l~~Plt~~t~~ 216 (343)
T 2yq5_A 146 IYNLTVGLIGVGHIGSAVAEIFSAMGA----KVIAY-DVAYNPE---FEPFLTY-TDFDTVLKEADIVSLHTPLFPSTEN 216 (343)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCGG---GTTTCEE-CCHHHHHHHCSEEEECCCCCTTTTT
T ss_pred cCCCeEEEEecCHHHHHHHHHHhhCCC----EEEEE-CCChhhh---hhccccc-cCHHHHHhcCCEEEEcCCCCHHHHH
Confidence 356899999999999999999999999 99999 9987541 1233444 37889999999999999853 3333
Q ss_pred HH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 87 VA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 87 v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 217 li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 251 (343)
T 2yq5_A 217 MIGEKQLKEMKKSAYLINCARGELVDTGALIKALQ 251 (343)
T ss_dssp CBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 33 2344557899999988654 34456665553
No 136
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.97 E-value=3.2e-09 Score=92.46 Aligned_cols=99 Identities=19% Similarity=0.214 Sum_probs=73.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhh--ccCCEEEEeeCcc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVV--EYSDVVVFSVKPQ 82 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~--~~aDivil~v~~~ 82 (272)
++.+||||||+|.||..++..|.+. ++ ++. ++ +|++++++.+.+ .|+..+.+.++++ .+.|+|++|+|+.
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~~~~----~lvav~-d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 77 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKSEKL----KLVTCY-SRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPND 77 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSE----EEEEEE-CSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTT
T ss_pred CCcceEEEEccCHHHHHHHHHHHhCCCc----EEEEEE-CCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChH
Confidence 4567999999999999999999876 55 654 77 999999888766 6887788889988 5699999999988
Q ss_pred cHHHHHHHhchhcCCCCEEE-EEcCCCCHHHHH
Q 024121 83 VVKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQ 114 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~ 114 (272)
...+++.... ..++.|+ .-.-+.+.+..+
T Consensus 78 ~h~~~~~~al---~~gk~vl~EKP~~~~~~~~~ 107 (354)
T 3db2_A 78 KHAEVIEQCA---RSGKHIYVEKPISVSLDHAQ 107 (354)
T ss_dssp SHHHHHHHHH---HTTCEEEEESSSCSSHHHHH
T ss_pred HHHHHHHHHH---HcCCEEEEccCCCCCHHHHH
Confidence 7666654433 3455444 322234444443
No 137
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.96 E-value=1e-09 Score=94.63 Aligned_cols=109 Identities=10% Similarity=0.084 Sum_probs=78.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-H
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-V 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~ 84 (272)
.....++|||||+|+||+.+++.+...|+ +|.+| +|++++. + +..+.. .+.++++++||+|++++|... .
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~--~-~~~~~~-~~l~ell~~aDvV~~~~P~~~~t 211 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGA----KVIAY-DPYPMKG--D-HPDFDY-VSLEDLFKQSDVIDLHVPGIEQN 211 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCSS--C-CTTCEE-CCHHHHHHHCSEEEECCCCCGGG
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-CCCcchh--h-Hhcccc-CCHHHHHhcCCEEEEcCCCchhH
Confidence 34556899999999999999999999999 99999 9987543 1 122333 477888999999999998643 4
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhCCCCEE
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTGHSRFI 123 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~~~~~~ 123 (272)
+.++ .+..+.++++.++|+++.|- ..+.+.+.+...++.
T Consensus 212 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 212 THIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp TTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCcc
Confidence 4444 33445678899999886553 445666666533333
No 138
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.96 E-value=9.6e-10 Score=96.90 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=76.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cH
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~ 84 (272)
.....++|||||+|+||+.+|+.+...|+ +|.+| ||++... ..+.....+.++++++||+|++++|.. ..
T Consensus 152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~----~V~~y-d~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvPlt~~T 222 (416)
T 3k5p_A 152 REVRGKTLGIVGYGNIGSQVGNLAESLGM----TVRYY-DTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVPSSKST 222 (416)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CTTCCCC----BTTBEECSSHHHHHHHCSEEEECCCC----
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-CCcchhc----ccCcEecCCHHHHHhhCCEEEEeCCCCHHH
Confidence 34556899999999999999999999999 99999 9875321 124455578899999999999999863 34
Q ss_pred HHHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 85 KDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 85 ~~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
+.++ .+....++++.++|+++.|- ..+.+.+.+.
T Consensus 223 ~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 223 SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp -CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred hhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 4444 23445578999999987553 3456666664
No 139
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.96 E-value=4.1e-09 Score=82.98 Aligned_cols=93 Identities=12% Similarity=0.146 Sum_probs=67.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceee-cCc------hhh--hccCCEEEE
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN------NAV--VEYSDVVVF 77 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~~------~~~--~~~aDivil 77 (272)
...++|.|+|+|.||..+++.|.+. |+ +|+++ ++++++.+.+.+.|+.+. .+. .++ +.++|+||+
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~----~V~vi-d~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK----ISLGI-EIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS----CEEEE-ESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC----eEEEE-ECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 3457899999999999999999999 99 99999 999999988887776532 121 222 568999999
Q ss_pred eeCcccH-HHHHHHhchhcCCCCEEEEEcC
Q 024121 78 SVKPQVV-KDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 78 ~v~~~~~-~~v~~~l~~~l~~~~~iis~~~ 106 (272)
|+|++.. ..++..+.. +.+...++....
T Consensus 112 ~~~~~~~~~~~~~~~~~-~~~~~~ii~~~~ 140 (183)
T 3c85_A 112 AMPHHQGNQTALEQLQR-RNYKGQIAAIAE 140 (183)
T ss_dssp CCSSHHHHHHHHHHHHH-TTCCSEEEEEES
T ss_pred eCCChHHHHHHHHHHHH-HCCCCEEEEEEC
Confidence 9987653 333333333 445555554433
No 140
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.94 E-value=5.4e-09 Score=91.04 Aligned_cols=86 Identities=9% Similarity=0.174 Sum_probs=68.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhc--cCCEEEEeeCcc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKS--GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~--g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDivil~v~~~ 82 (272)
+++||||||+|.||..++..|.+. ++ ++. ++ ++++++++.+.+ .|+..+.+.+++++ +.|+|++|+|+.
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~----~lvav~-d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRA----ELIDVC-DIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSG 86 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTE----EEEEEE-CSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGG
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCe----EEEEEE-cCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcH
Confidence 457999999999999999999986 55 655 77 999999888776 68888889999887 799999999998
Q ss_pred cHHHHHHHhchhcCCCCEEE
Q 024121 83 VVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~ii 102 (272)
...+++.... ..++.|+
T Consensus 87 ~h~~~~~~al---~~gk~v~ 103 (354)
T 3q2i_A 87 LHPTQSIECS---EAGFHVM 103 (354)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HCCCCEE
Confidence 7666655443 3455554
No 141
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.94 E-value=1.5e-09 Score=82.29 Aligned_cols=95 Identities=15% Similarity=0.162 Sum_probs=73.0
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHHHcCceeecCchhhhccCCEEEEeeCccc
Q 024121 10 SFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNL--KRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 10 ~~~IgiIG~----G~mG~~la~~l~~~g~~~~~~V~v~~~r~~--~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~ 83 (272)
..+|+|||+ |+||..++++|.+.|| +|+.+ |++. +.. .|+.+..+..++....|++++|+|++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~----~v~~v-np~~~g~~i-----~G~~~~~sl~el~~~~Dlvii~vp~~~ 82 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGY----HVIPV-SPKVAGKTL-----LGQQGYATLADVPEKVDMVDVFRNSEA 82 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTC----CEEEE-CSSSTTSEE-----TTEECCSSTTTCSSCCSEEECCSCSTH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCC----EEEEe-CCccccccc-----CCeeccCCHHHcCCCCCEEEEEeCHHH
Confidence 467999999 8999999999999999 88877 7664 222 588888888888889999999999999
Q ss_pred HHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHh
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~ 117 (272)
+.++++++.. ...+.+|+. .++. .+.+.+..
T Consensus 83 v~~v~~~~~~-~g~~~i~i~-~~~~-~~~l~~~a 113 (145)
T 2duw_A 83 AWGVAQEAIA-IGAKTLWLQ-LGVI-NEQAAVLA 113 (145)
T ss_dssp HHHHHHHHHH-HTCCEEECC-TTCC-CHHHHHHH
T ss_pred HHHHHHHHHH-cCCCEEEEc-CChH-HHHHHHHH
Confidence 9999988765 345556664 3443 44444444
No 142
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.94 E-value=4.9e-09 Score=91.19 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=73.1
Q ss_pred CCCCCCCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhc--cCCEEEEe
Q 024121 5 PIPAESFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFS 78 (272)
Q Consensus 5 ~~~~~~~~IgiIG~G~mG~-~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDivil~ 78 (272)
|.+|+.+||||||+|.||. .++..|.+. ++ +|. ++ +|++++++.+.+ .|+....+.+++++ +.|+|++|
T Consensus 22 ~~~m~~~rigiIG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~ 96 (350)
T 3rc1_A 22 PANANPIRVGVIGCADIAWRRALPALEAEPLT----EVTAIA-SRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVP 96 (350)
T ss_dssp ----CCEEEEEESCCHHHHHTHHHHHHHCTTE----EEEEEE-ESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEEC
T ss_pred CCCCCceEEEEEcCcHHHHHHHHHHHHhCCCe----EEEEEE-cCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEC
Confidence 4455668999999999998 789999886 45 665 77 999999888776 68888888899886 58999999
Q ss_pred eCcccHHHHHHHhchhcCCCCEEE-EEcCCCCHHHHHH
Q 024121 79 VKPQVVKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQE 115 (272)
Q Consensus 79 v~~~~~~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~~ 115 (272)
+|+....+++.... ..|+-|+ .-.-+.+.++.++
T Consensus 97 tp~~~h~~~~~~al---~aGk~Vl~EKP~a~~~~ea~~ 131 (350)
T 3rc1_A 97 LPAVLHAEWIDRAL---RAGKHVLAEKPLTTDRPQAER 131 (350)
T ss_dssp CCGGGHHHHHHHHH---HTTCEEEEESSSCSSHHHHHH
T ss_pred CCcHHHHHHHHHHH---HCCCcEEEeCCCCCCHHHHHH
Confidence 99887766665443 3455444 3222344554443
No 143
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.93 E-value=4.5e-09 Score=76.22 Aligned_cols=91 Identities=15% Similarity=0.177 Sum_probs=68.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHHcCceee-------cCchhhhccCCEEEEeeC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFESIGVKVL-------SDNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g-~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-------~~~~~~~~~aDivil~v~ 80 (272)
++++|.|+|+|.||..++..|.+.| + +|+++ +|++++.+.+...++... .+..+.++++|+||.|+|
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~----~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNY----SVTVA-DHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSE----EEEEE-ESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCc----eEEEE-eCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 3578999999999999999999999 8 99999 999999888776555432 122345678999999998
Q ss_pred cccHHHHHHHhchhcCCCCEEEEEcCC
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
......++.... ..+..+++.++.
T Consensus 79 ~~~~~~~~~~~~---~~g~~~~~~~~~ 102 (118)
T 3ic5_A 79 FFLTPIIAKAAK---AAGAHYFDLTED 102 (118)
T ss_dssp GGGHHHHHHHHH---HTTCEEECCCSC
T ss_pred chhhHHHHHHHH---HhCCCEEEecCc
Confidence 776666665443 345666665443
No 144
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.92 E-value=6.3e-09 Score=89.74 Aligned_cols=96 Identities=18% Similarity=0.290 Sum_probs=71.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhc--cCCEEEEeeCcccH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDivil~v~~~~~ 84 (272)
++||||||+|.||..++..|.+. ++ ++. ++ +|++++++.+.+ .|+. ..+.+++++ +.|+|++|+|+...
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h 76 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADA----RLVAVA-DAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTH 76 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTE----EEEEEE-CSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCc----EEEEEE-CCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhH
Confidence 57999999999999999999885 55 665 67 999999888876 6888 788889887 79999999999877
Q ss_pred HHHHHHhchhcCCCCEEE-EEcCCCCHHHHH
Q 024121 85 KDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQ 114 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~ 114 (272)
.+++.... ..++-|+ .-.-+.+.+..+
T Consensus 77 ~~~~~~al---~~gk~v~~EKP~~~~~~~~~ 104 (331)
T 4hkt_A 77 ADLIERFA---RAGKAIFCEKPIDLDAERVR 104 (331)
T ss_dssp HHHHHHHH---HTTCEEEECSCSCSSHHHHH
T ss_pred HHHHHHHH---HcCCcEEEecCCCCCHHHHH
Confidence 66665543 3444444 222234454433
No 145
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.91 E-value=1.4e-09 Score=94.34 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=68.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-----C--ceeecCchhhhccCCEEEEeeCc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-----G--VKVLSDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~-----g--~~~~~~~~~~~~~aDivil~v~~ 81 (272)
+.++|+|||+|.||.+++..|.... ...+|.+| ||++++++++.+. | +..+.+..++++++|+|++|+|.
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~--~~~~V~V~-~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHL--GIEEIVAY-DTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTAD 204 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHS--CCCEEEEE-CSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCC
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhC--CCcEEEEE-cCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccC
Confidence 5679999999999999999886531 11389999 9999999988772 6 34567888889999999999987
Q ss_pred ccHHHHHHHhchhcCCCCEEEEE
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
.....++. ...+++++.|+++
T Consensus 205 ~~~~pvl~--~~~l~~G~~V~~v 225 (350)
T 1x7d_A 205 KAYATIIT--PDMLEPGMHLNAV 225 (350)
T ss_dssp SSEEEEEC--GGGCCTTCEEEEC
T ss_pred CCCCceec--HHHcCCCCEEEEC
Confidence 63222332 1356788877765
No 146
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.91 E-value=1.4e-08 Score=76.39 Aligned_cols=101 Identities=12% Similarity=0.192 Sum_probs=69.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cCc--hhh-----hccCCEEEEeeC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN--NAV-----VEYSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~~--~~~-----~~~aDivil~v~ 80 (272)
++++|.|+|+|.+|..+++.|.+.|+ +|.++ ++++++.+.+.+.+..+. .|. .+. +.++|+||++++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~----~V~~i-d~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK----KVLAV-DKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC----CEEEE-ESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----eEEEE-ECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 45789999999999999999999999 99999 999999988887776432 221 221 357999999998
Q ss_pred cccHHHHHHHhchhcCCCCEEEEEcCCCCHHHHH
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQ 114 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~ 114 (272)
++.....+......+....+++...+....+.+.
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~~~~~~~~~l~ 113 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRVSSPKKKEEFE 113 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEESCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHhCCceEEEEEcChhHHHHHH
Confidence 6655443333333334445555443333334443
No 147
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.91 E-value=4.6e-09 Score=90.11 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=71.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH----H--------cCceeecCchhhhccCCEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE----S--------IGVKVLSDNNAVVEYSDVVV 76 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~----~--------~g~~~~~~~~~~~~~aDivi 76 (272)
+.|||+|||+|.||++++..|..+|+. +|++| |+++++++... . ..+..+.+. +.+++||+||
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~---~V~l~-D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi 77 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLA---DVVLF-DIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVI 77 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC---EEEEE-CSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCc---eEEEE-eCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEE
Confidence 457999999999999999999999862 79999 99987665431 1 123334555 6789999999
Q ss_pred EeeC--------------c--ccHHHHHHHhchhcCCCCEEEEEcCCCCH
Q 024121 77 FSVK--------------P--QVVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (272)
Q Consensus 77 l~v~--------------~--~~~~~v~~~l~~~l~~~~~iis~~~~~~~ 110 (272)
++++ . +.+++++.++.++. ++.+++..+++...
T Consensus 78 ~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~~ 126 (317)
T 2ewd_A 78 ITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPLDV 126 (317)
T ss_dssp ECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHH
T ss_pred EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHHH
Confidence 9992 1 23567777887774 68888877775543
No 148
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.90 E-value=8.9e-10 Score=96.21 Aligned_cols=102 Identities=13% Similarity=0.173 Sum_probs=75.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc---
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV--- 83 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~--- 83 (272)
....++|||||+|+||+++++.+...|+ +|.+| +|+++.. ..+.. ..+.++++++||+|++++|...
T Consensus 113 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~~~----~~g~~-~~~l~ell~~aDvV~l~~Plt~~g~ 182 (380)
T 2o4c_A 113 DLAERTYGVVGAGQVGGRLVEVLRGLGW----KVLVC-DPPRQAR----EPDGE-FVSLERLLAEADVISLHTPLNRDGE 182 (380)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CHHHHHH----STTSC-CCCHHHHHHHCSEEEECCCCCSSSS
T ss_pred ccCCCEEEEEeCCHHHHHHHHHHHHCCC----EEEEE-cCChhhh----ccCcc-cCCHHHHHHhCCEEEEeccCccccc
Confidence 4467899999999999999999999999 99999 8866432 23433 3577889999999999998543
Q ss_pred --HHHHH-HHhchhcCCCCEEEEEcCCC--CHHHHHHHhC
Q 024121 84 --VKDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (272)
Q Consensus 84 --~~~v~-~~l~~~l~~~~~iis~~~~~--~~~~l~~~~~ 118 (272)
...++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 183 ~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~ 222 (380)
T 2o4c_A 183 HPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLE 222 (380)
T ss_dssp SCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 34444 23455678999999887553 4455666554
No 149
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.89 E-value=2.1e-09 Score=88.37 Aligned_cols=80 Identities=23% Similarity=0.341 Sum_probs=62.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHHcCceeecCchhhh-ccCCEEEEeeCcccHHHHH
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVV-EYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~-~~aDivil~v~~~~~~~v~ 88 (272)
|||||||+|.||..+++.|.+.|+ ++ .+| ||++ +.++ .+.+.++++ .++|+|++|+|++...+++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~----~lv~v~-d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~~~~~ 67 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGF----EIAAIL-DVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAVKDYA 67 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEEE-CSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCC----EEEEEE-ecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHHHHHH
Confidence 689999999999999999998888 87 688 9885 3221 567788888 6899999999988776666
Q ss_pred HHhchhcCCCCEEEEEcC
Q 024121 89 MQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~ 106 (272)
... +..|+.+++...
T Consensus 68 ~~~---l~~G~~vv~~~~ 82 (236)
T 2dc1_A 68 EKI---LKAGIDLIVLST 82 (236)
T ss_dssp HHH---HHTTCEEEESCG
T ss_pred HHH---HHCCCcEEEECc
Confidence 443 457777776543
No 150
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.88 E-value=9.5e-10 Score=95.84 Aligned_cols=103 Identities=16% Similarity=0.206 Sum_probs=74.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-c-
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-V- 83 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~- 83 (272)
.....++|||||+|+||+++++.+...|+ +|.+| ||..+.. ..+. ...+.++++++||+|++++|.. .
T Consensus 115 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~----~V~~~-d~~~~~~----~~~~-~~~sl~ell~~aDiV~l~~Plt~~g 184 (381)
T 3oet_A 115 FSLRDRTIGIVGVGNVGSRLQTRLEALGI----RTLLC-DPPRAAR----GDEG-DFRTLDELVQEADVLTFHTPLYKDG 184 (381)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CHHHHHT----TCCS-CBCCHHHHHHHCSEEEECCCCCCSS
T ss_pred CccCCCEEEEEeECHHHHHHHHHHHHCCC----EEEEE-CCChHHh----ccCc-ccCCHHHHHhhCCEEEEcCcCCccc
Confidence 34567899999999999999999999999 99999 8754322 1222 3457889999999999999843 2
Q ss_pred ---HHHHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 84 ---VKDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 84 ---~~~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
...++ .+....++++.++|+++-| +..+.+.+.+.
T Consensus 185 ~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~ 225 (381)
T 3oet_A 185 PYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLN 225 (381)
T ss_dssp TTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 33333 2344557899999988654 34456666554
No 151
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.88 E-value=5.8e-09 Score=89.95 Aligned_cols=99 Identities=11% Similarity=0.185 Sum_probs=72.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCCEEEEeeCc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVKP 81 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDivil~v~~ 81 (272)
|+++||||||+|.||..++..|.+. ++ +|. ++ +|++++++.+.+ .|+ ..+.+.++++. +.|+|++|+|+
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQA----EVRGIA-SRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYN 77 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSE----EEEEEB-CSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCG
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCc----EEEEEE-eCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 3567999999999999999999885 44 665 67 999999888776 677 57788888887 79999999999
Q ss_pred ccHHHHHHHhchhcCCCC-EEEEEcCCCCHHHHH
Q 024121 82 QVVKDVAMQIRPLLSRKK-LLVSVAAGVKLKDLQ 114 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~-~iis~~~~~~~~~l~ 114 (272)
....+++.... ..++ +++.-.-+.+.+..+
T Consensus 78 ~~h~~~~~~al---~~gk~vl~EKP~~~~~~e~~ 108 (330)
T 3e9m_A 78 QGHYSAAKLAL---SQGKPVLLEKPFTLNAAEAE 108 (330)
T ss_dssp GGHHHHHHHHH---HTTCCEEECSSCCSSHHHHH
T ss_pred HHHHHHHHHHH---HCCCeEEEeCCCCCCHHHHH
Confidence 87666665443 2344 444322234444433
No 152
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.87 E-value=1.2e-09 Score=94.17 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=75.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~ 85 (272)
....++|||||+|+||+.+++.+...|+ +|.+| +|++++. + +..+. ..+..+++++||+|++++|.. ..+
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~--~-~~~~~-~~~l~ell~~aDvV~~~~p~t~~t~ 213 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGA----TVIGE-DVFEIKG--I-EDYCT-QVSLDEVLEKSDIITIHAPYIKENG 213 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCCS--C-TTTCE-ECCHHHHHHHCSEEEECCCCCTTTC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-CCCccHH--H-Hhccc-cCCHHHHHhhCCEEEEecCCchHHH
Confidence 3456899999999999999999999999 99999 9987543 2 22233 347788899999999999864 333
Q ss_pred HHH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhC
Q 024121 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (272)
Q Consensus 86 ~v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~ 118 (272)
.++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 214 ~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 249 (331)
T 1xdw_A 214 AVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVE 249 (331)
T ss_dssp CSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHH
Confidence 333 2344557889999988654 34456666664
No 153
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.86 E-value=1.2e-08 Score=88.42 Aligned_cols=97 Identities=19% Similarity=0.319 Sum_probs=71.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCCEEEEeeCccc
Q 024121 10 SFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVKPQV 83 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDivil~v~~~~ 83 (272)
++||||||+|.||..++..|.+. ++ ++. ++ ++++++++++.+ .|+ ..+.+.+++++ ++|+|++|+|+..
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 76 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDA----ILYAIS-DVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNT 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTE----EEEEEE-CSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCc----EEEEEE-CCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcc
Confidence 47999999999999999999875 44 655 67 999999888776 676 47788889887 7999999999987
Q ss_pred HHHHHHHhchhcCCCCEEE-EEcCCCCHHHHH
Q 024121 84 VKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQ 114 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~ 114 (272)
..+++.... ..++-|+ .-.-+.+.+..+
T Consensus 77 h~~~~~~al---~~gk~v~~EKP~~~~~~e~~ 105 (344)
T 3ezy_A 77 HSELVIACA---KAKKHVFCEKPLSLNLADVD 105 (344)
T ss_dssp HHHHHHHHH---HTTCEEEEESCSCSCHHHHH
T ss_pred hHHHHHHHH---hcCCeEEEECCCCCCHHHHH
Confidence 766665443 3445444 322234554433
No 154
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.86 E-value=5.5e-08 Score=73.12 Aligned_cols=91 Identities=11% Similarity=0.237 Sum_probs=66.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cCc--hhh-----hccCCEEEEeeCc
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN--NAV-----VEYSDVVVFSVKP 81 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~~--~~~-----~~~aDivil~v~~ 81 (272)
..+|.|+|+|.+|..+++.|.+.|+ +|+++ ++++++.+.+.+.|+.+. .|. .+. +.++|+||+++++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~----~v~vi-d~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI----PLVVI-ETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC----CEEEE-ECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 4689999999999999999999999 99999 999999999888777543 221 222 4689999999987
Q ss_pred ccHHH-HHHHhchhcCCCCEEEEEcC
Q 024121 82 QVVKD-VAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 82 ~~~~~-v~~~l~~~l~~~~~iis~~~ 106 (272)
+.... ++..+.. +.++..++.-..
T Consensus 82 ~~~n~~~~~~a~~-~~~~~~iiar~~ 106 (140)
T 3fwz_A 82 GYEAGEIVASARA-KNPDIEIIARAH 106 (140)
T ss_dssp HHHHHHHHHHHHH-HCSSSEEEEEES
T ss_pred hHHHHHHHHHHHH-HCCCCeEEEEEC
Confidence 65433 3333333 345555554433
No 155
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.86 E-value=3.9e-09 Score=90.42 Aligned_cols=101 Identities=19% Similarity=0.265 Sum_probs=70.2
Q ss_pred CCCCCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcE-EEEeCCCHHHHHHHHHcCceeecCchhhhc--cCCEEEEeeC
Q 024121 5 PIPAESFILGFIGAGKMAESIAKGVAKS-GVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVK 80 (272)
Q Consensus 5 ~~~~~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDivil~v~ 80 (272)
|.+.+.+||||||+|.||..++..|.+. ++ ++ .++ ++++++++.+.+. +....+.+++++ ++|+|++|+|
T Consensus 5 p~~~~~~~igiIG~G~~g~~~~~~l~~~~~~----~~v~v~-d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp 78 (315)
T 3c1a_A 5 PANNSPVRLALIGAGRWGKNYIRTIAGLPGA----ALVRLA-SSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATP 78 (315)
T ss_dssp ----CCEEEEEEECTTTTTTHHHHHHHCTTE----EEEEEE-ESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESC
T ss_pred CCCCCcceEEEECCcHHHHHHHHHHHhCCCc----EEEEEE-eCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCC
Confidence 4444568999999999999999999885 44 54 477 9999887665544 666778888885 7999999999
Q ss_pred cccHHHHHHHhchhcCCCCEEE-EEcCCCCHHHHH
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQ 114 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~ 114 (272)
+....+++.... ..|+.|+ .-.-..+.+...
T Consensus 79 ~~~h~~~~~~al---~~Gk~v~~eKP~~~~~~~~~ 110 (315)
T 3c1a_A 79 PATHAEITLAAI---ASGKAVLVEKPLTLDLAEAE 110 (315)
T ss_dssp GGGHHHHHHHHH---HTTCEEEEESSSCSCHHHHH
T ss_pred hHHHHHHHHHHH---HCCCcEEEcCCCcCCHHHHH
Confidence 988777665543 3555444 322234454433
No 156
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.84 E-value=3.1e-08 Score=84.39 Aligned_cols=111 Identities=15% Similarity=0.245 Sum_probs=74.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeecCchhhhccCCEEEEeeCc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~aDivil~v~~ 81 (272)
|||+|||+|.||.+++..|...|+. .+|.+| |+++++++.... . ...+..+..+.+++||+||++++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~--~eV~L~-D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~ 77 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSC--SELVLV-DRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGA 77 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC--SEEEEE-CSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 6899999999999999999998863 379999 999886654222 1 123322334668999999999942
Q ss_pred c----------------cHHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHHhCCCCEEEE
Q 024121 82 Q----------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTGHSRFIRV 125 (272)
Q Consensus 82 ~----------------~~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~~~~~~~~ 125 (272)
. .+++++.++.++ .|+.+++..+++... ..+.+..+..++++.
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 78 NQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 2 236667777776 578777766676543 223444444456554
No 157
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.83 E-value=2.1e-08 Score=86.97 Aligned_cols=85 Identities=16% Similarity=0.286 Sum_probs=66.8
Q ss_pred CCeEEEEcccHHHHHHHHHHH-h-CCCCCCCcEE-EEeCCCHHHHHHHHH-cC--ceeecCchhhhcc--CCEEEEeeCc
Q 024121 10 SFILGFIGAGKMAESIAKGVA-K-SGVLPPDRIC-TAVHSNLKRRDAFES-IG--VKVLSDNNAVVEY--SDVVVFSVKP 81 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~-~-~g~~~~~~V~-v~~~r~~~~~~~l~~-~g--~~~~~~~~~~~~~--aDivil~v~~ 81 (272)
++||||||+|.||..++..+. + .++ ++. ++ +|++++++.+.+ .| ...+.+.++++++ .|+|++|+|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~----~l~av~-d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGA----EIVAVT-DVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWG 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSE----EEEEEE-CSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCc----EEEEEE-cCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCc
Confidence 469999999999999999998 4 344 665 67 999999888776 67 6778899998875 9999999998
Q ss_pred ccHHHHHHHhchhcCCCCEEE
Q 024121 82 QVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~ii 102 (272)
....+++.... ..|+.|+
T Consensus 77 ~~h~~~~~~al---~~Gk~vl 94 (344)
T 3mz0_A 77 PAHESSVLKAI---KAQKYVF 94 (344)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred hhHHHHHHHHH---HCCCcEE
Confidence 87766665443 3455444
No 158
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.83 E-value=2.1e-08 Score=86.91 Aligned_cols=89 Identities=12% Similarity=0.273 Sum_probs=67.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHH-hC-CCCCCCcE-EEEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCCEEEEe
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVA-KS-GVLPPDRI-CTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFS 78 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~-~~-g~~~~~~V-~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDivil~ 78 (272)
.+++++||+|||+|.||..++..|. +. ++ ++ .++ ++++++++.+.+ .|+ .++.+..++++ ++|+|++|
T Consensus 4 ~~~~~~~v~iiG~G~ig~~~~~~l~~~~~~~----~~vav~-d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~ 78 (346)
T 3cea_A 4 TTRKPLRAAIIGLGRLGERHARHLVNKIQGV----KLVAAC-ALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIV 78 (346)
T ss_dssp -CCCCEEEEEECCSTTHHHHHHHHHHTCSSE----EEEEEE-CSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEEC
T ss_pred CCCCcceEEEEcCCHHHHHHHHHHHhcCCCc----EEEEEe-cCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEe
Confidence 3456789999999999999999988 53 55 64 577 999999887766 577 66778888876 69999999
Q ss_pred eCcccHHHHHHHhchhcCCCCEEE
Q 024121 79 VKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 79 v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+|+....+++... +..|+.|+
T Consensus 79 tp~~~h~~~~~~a---l~~G~~v~ 99 (346)
T 3cea_A 79 APTPFHPEMTIYA---MNAGLNVF 99 (346)
T ss_dssp SCGGGHHHHHHHH---HHTTCEEE
T ss_pred CChHhHHHHHHHH---HHCCCEEE
Confidence 9988766665443 33565554
No 159
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.82 E-value=2.8e-08 Score=85.46 Aligned_cols=85 Identities=18% Similarity=0.237 Sum_probs=66.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CCCCCcE-EEEeCCCHHHHHHHHH-cCc-eeecCchhhh-ccCCEEEEeeCcccH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSG-VLPPDRI-CTAVHSNLKRRDAFES-IGV-KVLSDNNAVV-EYSDVVVFSVKPQVV 84 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g-~~~~~~V-~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~-~~aDivil~v~~~~~ 84 (272)
++||||||+|.||..++..|.+.+ + ++ .++ ++++++++.+.+ .|. ....+.++++ .+.|+|++|+|+...
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~----~~~~v~-d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h 75 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEY----QLVAIY-SRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLH 75 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSE----EEEEEE-CSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGH
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCe----EEEEEE-eCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHH
Confidence 368999999999999999998763 4 65 477 999999888776 564 6677888888 689999999999877
Q ss_pred HHHHHHhchhcCCCCEEE
Q 024121 85 KDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~ii 102 (272)
.+++.... ..|+.|+
T Consensus 76 ~~~~~~al---~~gk~V~ 90 (325)
T 2ho3_A 76 FAQAKAAL---SAGKHVI 90 (325)
T ss_dssp HHHHHHHH---HTTCEEE
T ss_pred HHHHHHHH---HcCCcEE
Confidence 66665543 3555444
No 160
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.81 E-value=2.7e-08 Score=85.45 Aligned_cols=77 Identities=19% Similarity=0.240 Sum_probs=60.0
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cCcee-ecCchhhh-ccCCEEEEeeCcccH
Q 024121 10 SFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IGVKV-LSDNNAVV-EYSDVVVFSVKPQVV 84 (272)
Q Consensus 10 ~~~IgiIG~G~mG~-~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~-~~~~~~~~-~~aDivil~v~~~~~ 84 (272)
++||||||+|.||. .++..|.+. ++ ++.++ ++++++++++.+ .|+.. ..+..+.+ .++|+|++|+|+...
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~----~l~v~-d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h 76 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDI----ELVLC-TRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVH 76 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTE----EEEEE-CSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCc----eEEEE-eCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhH
Confidence 47999999999998 589988764 45 77788 999999888776 57653 44545555 689999999999877
Q ss_pred HHHHHHh
Q 024121 85 KDVAMQI 91 (272)
Q Consensus 85 ~~v~~~l 91 (272)
.+++...
T Consensus 77 ~~~~~~a 83 (323)
T 1xea_A 77 STLAAFF 83 (323)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666543
No 161
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.80 E-value=2.9e-08 Score=86.52 Aligned_cols=100 Identities=20% Similarity=0.276 Sum_probs=71.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHH-h-CCCCCCCcEE-EEeCCCHHHHHHHHH-cC--ceeecCchhhhc--cCCEEEEee
Q 024121 8 AESFILGFIGAGKMAESIAKGVA-K-SGVLPPDRIC-TAVHSNLKRRDAFES-IG--VKVLSDNNAVVE--YSDVVVFSV 79 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~-~-~g~~~~~~V~-v~~~r~~~~~~~l~~-~g--~~~~~~~~~~~~--~aDivil~v 79 (272)
|+.+||||||+|.||..++..|. + .++ ++. ++ ++++++++.+.+ .| +..+.+.+++++ +.|+|++|+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~----~lvav~-d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~t 95 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGV----EVVAVC-DIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITA 95 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTE----EEEEEE-CSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECS
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCc----EEEEEE-eCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcC
Confidence 35579999999999999999998 4 344 665 67 999999888776 56 677889899887 589999999
Q ss_pred CcccHHHHHHHhchhcCCCCEEE-EEcCCCCHHHHHH
Q 024121 80 KPQVVKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQE 115 (272)
Q Consensus 80 ~~~~~~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~~ 115 (272)
|+....+++.... ..|+-|+ .-.-+.+.+..++
T Consensus 96 p~~~h~~~~~~al---~aGk~Vl~EKPla~~~~e~~~ 129 (357)
T 3ec7_A 96 SNEAHADVAVAAL---NANKYVFCEKPLAVTAADCQR 129 (357)
T ss_dssp CGGGHHHHHHHHH---HTTCEEEEESSSCSSHHHHHH
T ss_pred CcHHHHHHHHHHH---HCCCCEEeecCccCCHHHHHH
Confidence 9887766665443 3455444 3222344444333
No 162
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.80 E-value=3.3e-08 Score=86.25 Aligned_cols=87 Identities=18% Similarity=0.252 Sum_probs=68.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHcCceeecCchhhhc--cCCEEEEeeCccc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDivil~v~~~~ 83 (272)
|+.+||||||+|.||...+..|.+. ++ +|. ++ ++++++++...+.|+..+.|.++++. +.|+|++|+|+..
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNL----EVHGVF-DILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDS 77 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTE----EEEEEE-CSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGG
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCc----EEEEEE-cCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 3567999999999999999998876 44 665 67 99999887666688888888899887 7899999999887
Q ss_pred HHHHHHHhchhcCCCCEEE
Q 024121 84 VKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~ii 102 (272)
..++..... ..|+-|+
T Consensus 78 h~~~~~~al---~aGkhVl 93 (359)
T 3e18_A 78 HKELAISAL---EAGKHVV 93 (359)
T ss_dssp HHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHH---HCCCCEE
Confidence 666655433 3455554
No 163
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.78 E-value=2.3e-08 Score=85.78 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=68.2
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCccc
Q 024121 8 AESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~-la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~ 83 (272)
|+++||||||+|.||.. ++..|.+. ++ ++. ++ +|++++.+.+.+ .|+...++.+++..++|+|++|+|+..
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~----~lvav~-d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~ 77 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDW----TLQGAW-SPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTAS 77 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSE----EEEEEE-CSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCe----EEEEEE-CCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchh
Confidence 35679999999999996 88888763 45 665 78 999998887766 577666676666568999999999887
Q ss_pred HHHHHHHhchhcCCCCEEE-EEcCCCCHHHH
Q 024121 84 VKDVAMQIRPLLSRKKLLV-SVAAGVKLKDL 113 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l 113 (272)
..+++... +..|+.|+ .-.-+.+.+..
T Consensus 78 h~~~~~~a---l~~G~~v~~eKP~~~~~~~~ 105 (319)
T 1tlt_A 78 HFDVVSTL---LNAGVHVCVDKPLAENLRDA 105 (319)
T ss_dssp HHHHHHHH---HHTTCEEEEESSSCSSHHHH
T ss_pred HHHHHHHH---HHcCCeEEEeCCCCCCHHHH
Confidence 66665543 33555444 32223445443
No 164
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.77 E-value=3.1e-08 Score=88.79 Aligned_cols=100 Identities=12% Similarity=0.134 Sum_probs=76.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-HH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-VK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~~ 85 (272)
....++|+|||+|.||..+|+.+...|. +|++| +|++.+.......|+.+ .+.+++++++|+|++++.... +.
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~----~Viv~-d~~~~~~~~a~~~g~~~-~~l~ell~~aDiVi~~~~t~~lI~ 327 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA----RVYIT-EIDPICAIQAVMEGFNV-VTLDEIVDKGDFFITCTGNVDVIK 327 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC----EEEEE-CSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECCSSSSSBC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC----EEEEE-eCChhhHHHHHHcCCEe-cCHHHHHhcCCEEEECCChhhhcC
Confidence 4567899999999999999999999999 99999 99998765555567765 478899999999999974333 21
Q ss_pred HHHHHhchhcCCCCEEEEEcCC---CCHHHHHH
Q 024121 86 DVAMQIRPLLSRKKLLVSVAAG---VKLKDLQE 115 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~~---~~~~~l~~ 115 (272)
.+....++++.++|++..+ +..+.+.+
T Consensus 328 ---~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 328 ---LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp ---HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred ---HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 1233446889999988665 34556655
No 165
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.75 E-value=5e-08 Score=83.33 Aligned_cols=92 Identities=18% Similarity=0.213 Sum_probs=65.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHH---c-------C--ceeecCchhhhccCCEEE
Q 024121 11 FILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFES---I-------G--VKVLSDNNAVVEYSDVVV 76 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~---~-------g--~~~~~~~~~~~~~aDivi 76 (272)
|||+|||+|.||.+++..|... |+ +|.+| |+++++++.... . . +..+.+.++ +++||+||
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~----~V~l~-D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvVi 74 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLAR----ELVLL-DVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVI 74 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCS----EEEEE-CSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCC----EEEEE-eCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEE
Confidence 6899999999999999999985 66 99999 999877665431 1 1 233456655 89999999
Q ss_pred EeeCcc----------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 77 FSVKPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 77 l~v~~~----------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
+|+|.. .++++.+.+.++ .++..++..+++..
T Consensus 75 iav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~tNP~~ 122 (310)
T 1guz_A 75 ITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVSNPLD 122 (310)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECCSSHH
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEcCchH
Confidence 999531 124555566666 46667666666543
No 166
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.75 E-value=5.4e-08 Score=83.81 Aligned_cols=84 Identities=17% Similarity=0.267 Sum_probs=65.0
Q ss_pred CeEEEEcccHHHHHH-HHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHH-cCce-eecCchhhhc--cCCEEEEeeCcccH
Q 024121 11 FILGFIGAGKMAESI-AKGVAKSGVLPPDRIC-TAVHSNLKRRDAFES-IGVK-VLSDNNAVVE--YSDVVVFSVKPQVV 84 (272)
Q Consensus 11 ~~IgiIG~G~mG~~l-a~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~aDivil~v~~~~~ 84 (272)
+||||||+|.||..+ +..|.+.++ ++. ++ +|++++++++.+ .|+. ...+.+++++ ++|+|++|+|+...
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~----~~vav~-d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h 75 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGG----EVVSMM-STSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELH 75 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTC----EEEEEE-CSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCC----eEEEEE-CCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHh
Confidence 589999999999998 788887666 665 77 999999887766 5764 6678888876 59999999998877
Q ss_pred HHHHHHhchhcCCCCEEE
Q 024121 85 KDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~ii 102 (272)
.+++.... ..|+.|+
T Consensus 76 ~~~~~~al---~~Gk~v~ 90 (332)
T 2glx_A 76 REQTLAAI---RAGKHVL 90 (332)
T ss_dssp HHHHHHHH---HTTCEEE
T ss_pred HHHHHHHH---HCCCeEE
Confidence 66665443 3566444
No 167
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.73 E-value=2.9e-08 Score=81.52 Aligned_cols=90 Identities=21% Similarity=0.182 Sum_probs=66.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v 87 (272)
++|||+|+|+|+||+.+++.+.+.++ ++. ++ +|+++. ..|+.++++.+++. ++|+||-++.|+.+.+.
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~~----eLva~~-d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft~p~a~~~~ 70 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKGH----EIVGVI-ENTPKA-----TTPYQQYQHIADVK-GADVAIDFSNPNLLFPL 70 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC----EEEEEE-CSSCC-------CCSCBCSCTTTCT-TCSEEEECSCHHHHHHH
T ss_pred CceEEEEECcCHHHHHHHHHHHhCCC----EEEEEE-ecCccc-----cCCCceeCCHHHHh-CCCEEEEeCChHHHHHH
Confidence 46899999999999999999998875 655 56 887652 36788888888877 99999977777776666
Q ss_pred HHHhchhcCCCCEEEEEcCCCCHHHHH
Q 024121 88 AMQIRPLLSRKKLLVSVAAGVKLKDLQ 114 (272)
Q Consensus 88 ~~~l~~~l~~~~~iis~~~~~~~~~l~ 114 (272)
+. +..+.-+|..+.|++.+.++
T Consensus 71 ~~-----l~~g~~vVigTTG~s~e~~~ 92 (243)
T 3qy9_A 71 LD-----EDFHLPLVVATTGEKEKLLN 92 (243)
T ss_dssp HT-----SCCCCCEEECCCSSHHHHHH
T ss_pred HH-----HhcCCceEeCCCCCCHHHHH
Confidence 54 34555566556677665443
No 168
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.73 E-value=1.1e-07 Score=76.94 Aligned_cols=89 Identities=18% Similarity=0.167 Sum_probs=66.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceee-cCc------hh-hhccCCEEEEeeCc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVL-SDN------NA-VVEYSDVVVFSVKP 81 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~-~~~------~~-~~~~aDivil~v~~ 81 (272)
|||.|+|+|.+|+.+++.|.+.|+ +|+++ ++++++.+.+.+ .+..+. .|. .+ -+.++|+||+++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~----~v~vi-d~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY----GVVII-NKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC----CEEEE-ESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 689999999999999999999999 99999 999999988765 465432 221 12 25689999999998
Q ss_pred ccHHHHHHHhchhcCCCCEEEEE
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
+.....+..+...+.+...++..
T Consensus 76 d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 76 DEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEC
T ss_pred cHHHHHHHHHHHHHcCCCeEEEE
Confidence 87666555544443355555543
No 169
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.72 E-value=2.8e-08 Score=74.54 Aligned_cols=90 Identities=16% Similarity=0.298 Sum_probs=61.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cC---ch---hh-hccCCEEEEeeC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD---NN---AV-VEYSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~---~~---~~-~~~aDivil~v~ 80 (272)
++++|.|+|+|.+|..++..|.+.|+ +|+++ +|++++.+.+.+.+.... .+ .+ ++ ..++|+||.|++
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~----~v~~~-d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 79 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGH----EVLAV-DINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIG 79 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC----CCEEE-ESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 34679999999999999999999998 99999 999988777665554322 12 11 22 568999999998
Q ss_pred cc-cHHHHHHHhchhcCCCCEEEE
Q 024121 81 PQ-VVKDVAMQIRPLLSRKKLLVS 103 (272)
Q Consensus 81 ~~-~~~~v~~~l~~~l~~~~~iis 103 (272)
.+ .....+......+.+..+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~ii~~ 103 (144)
T 2hmt_A 80 ANIQASTLTTLLLKELDIPNIWVK 103 (144)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CchHHHHHHHHHHHHcCCCeEEEE
Confidence 65 433233333333455544443
No 170
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.72 E-value=8.7e-08 Score=82.68 Aligned_cols=101 Identities=14% Similarity=0.236 Sum_probs=70.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCc-EEEEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCCEEEEeeCcccH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDR-ICTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVKPQVV 84 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~-V~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDivil~v~~~~~ 84 (272)
++||||||+|.||..++..|.+.+. ...+ +.++ +|++++++.+.+ .|+ .++.|.+++++ +.|+|++|+|+...
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~-~~~~l~av~-d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 79 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPR-SEHQVVAVA-ARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQH 79 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCT-TTEEEEEEE-CSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGH
T ss_pred ccEEEEECchHHHHHHHHHHHhCCC-CCeEEEEEE-cCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 4799999999999999999876542 0013 4567 999999888876 676 57788899887 69999999998876
Q ss_pred HHHHHHhchhcCCCCEEE-EEcCCCCHHHHHH
Q 024121 85 KDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQE 115 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~~ 115 (272)
.++..... ..|+-|+ .-.-+.+.++.++
T Consensus 80 ~~~~~~al---~~GkhVl~EKP~a~~~~e~~~ 108 (334)
T 3ohs_X 80 KAAVMLCL---AAGKAVLCEKPMGVNAAEVRE 108 (334)
T ss_dssp HHHHHHHH---HTTCEEEEESSSSSSHHHHHH
T ss_pred HHHHHHHH---hcCCEEEEECCCCCCHHHHHH
Confidence 66654433 3455444 3222334544443
No 171
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.72 E-value=4e-08 Score=88.37 Aligned_cols=97 Identities=10% Similarity=0.083 Sum_probs=74.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-H-
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-V- 84 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~- 84 (272)
....++|+|||+|.||..+|+.+...|. +|++| +|++.+.......|+.. .+.+++++++|+|++++.... +
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~----~V~v~-d~~~~~~~~a~~~G~~~-~~l~ell~~aDiVi~~~~t~~lI~ 347 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA----TVWVT-EIDPICALQAAMEGYRV-VTMEYAADKADIFVTATGNYHVIN 347 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECSSSSCSBC
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-eCChHhHHHHHHcCCEe-CCHHHHHhcCCEEEECCCcccccC
Confidence 4567899999999999999999999998 99999 99987754444567765 478899999999999984332 2
Q ss_pred HHHHHHhchhcCCCCEEEEEcCCC---CHHHH
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAGV---KLKDL 113 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~~---~~~~l 113 (272)
.+.+ ..++++.++|++..+- ..+.+
T Consensus 348 ~~~l----~~MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 348 HDHM----KAMRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp HHHH----HHCCTTEEEEECSSSSCSBCCGGG
T ss_pred HHHH----hhCCCCcEEEEcCCCcchhchHHH
Confidence 2333 4467899999886652 44455
No 172
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.71 E-value=4.2e-08 Score=84.26 Aligned_cols=87 Identities=16% Similarity=0.180 Sum_probs=66.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc------CceeecCchhhhccCCEEEEeeCcc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI------GVKVLSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~------g~~~~~~~~~~~~~aDivil~v~~~ 82 (272)
+.++|+|||+|.||..++..|.+.. +..+|.+| ||++++++++.+. ++. +.+.++++ ++|+|++|+|..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~-~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~ 198 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVF--DIGEVKAY-DVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSR 198 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHS--CCCEEEEE-CSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCS
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhC--CccEEEEE-CCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCC
Confidence 5679999999999999999998732 12389999 9999999888762 244 67778888 999999999864
Q ss_pred cHHHHHHHhchhcCCCCEEEEE
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~ 104 (272)
. .++. ...+++++.|+++
T Consensus 199 ~--pv~~--~~~l~~G~~V~~i 216 (322)
T 1omo_A 199 K--PVVK--AEWVEEGTHINAI 216 (322)
T ss_dssp S--CCBC--GGGCCTTCEEEEC
T ss_pred C--ceec--HHHcCCCeEEEEC
Confidence 3 2221 1356788877765
No 173
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.71 E-value=7.5e-08 Score=82.85 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=67.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH----H----c----CceeecCchhhhccCCEEEE
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE----S----I----GVKVLSDNNAVVEYSDVVVF 77 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~----~----~----g~~~~~~~~~~~~~aDivil 77 (272)
.+||+|||+|.||.+++..|...|+. +|.+| |+++++++... . . .+..+.+. +++++||+||+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~---~V~L~-Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~ 88 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLG---DVYMF-DIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVII 88 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC---EEEEE-CSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC---eEEEE-ECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEE
Confidence 36999999999999999999999873 69999 99987765321 1 0 23444566 77899999999
Q ss_pred ee--Cc--------------ccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 78 SV--KP--------------QVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 78 ~v--~~--------------~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
++ |. ..+.+++.++.++. |+.+++..++++
T Consensus 89 avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~ 134 (328)
T 2hjr_A 89 TAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPL 134 (328)
T ss_dssp CCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred cCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCch
Confidence 98 32 12556677777664 777776555543
No 174
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.71 E-value=1e-07 Score=85.71 Aligned_cols=110 Identities=20% Similarity=0.232 Sum_probs=74.3
Q ss_pred CCCeEEEEcccHH--HHHHHHHHHhC----CCCCCCcEEEEeCCCHHHHHHHHH--------c--C--ceeecCchhhhc
Q 024121 9 ESFILGFIGAGKM--AESIAKGVAKS----GVLPPDRICTAVHSNLKRRDAFES--------I--G--VKVLSDNNAVVE 70 (272)
Q Consensus 9 ~~~~IgiIG~G~m--G~~la~~l~~~----g~~~~~~V~v~~~r~~~~~~~l~~--------~--g--~~~~~~~~~~~~ 70 (272)
+.|||+|||+|.| |.+++..|.+. |+ +|.+| |+++++++.... . . +..+.|..++++
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~----eV~L~-Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~ 76 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGS----TVTLM-DIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVII 76 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTC----EEEEE-CSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCCC----EEEEE-eCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhC
Confidence 4679999999997 57677788754 56 99999 999987654322 1 1 334456667889
Q ss_pred cCCEEEEeeCcc------------------------------------------cHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 71 YSDVVVFSVKPQ------------------------------------------VVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 71 ~aDivil~v~~~------------------------------------------~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
+||+||++++.. .+.++++.+..+ .|+..++..++++
T Consensus 77 dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~-~P~A~ii~~TNPv 155 (480)
T 1obb_A 77 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL-SPKAWYLQAANPI 155 (480)
T ss_dssp TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH-CTTCEEEECSSCH
T ss_pred CCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHH-CCCeEEEEeCCcH
Confidence 999999999641 233455555554 4788888777766
Q ss_pred CH--HHHHHHhCCCCEEEE
Q 024121 109 KL--KDLQEWTGHSRFIRV 125 (272)
Q Consensus 109 ~~--~~l~~~~~~~~~~~~ 125 (272)
.. ..+.+ ++..++++.
T Consensus 156 di~t~~~~k-~p~~rviG~ 173 (480)
T 1obb_A 156 FEGTTLVTR-TVPIKAVGF 173 (480)
T ss_dssp HHHHHHHHH-HSCSEEEEE
T ss_pred HHHHHHHHH-CCCCcEEec
Confidence 53 23333 554566664
No 175
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.70 E-value=5e-08 Score=86.01 Aligned_cols=100 Identities=13% Similarity=0.114 Sum_probs=76.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-HH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-VK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~~ 85 (272)
....++|+|||+|.+|.++++.|...|. +|.++ ++++.+.......|... .+.+++++++|+|+++..... +.
T Consensus 208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga----~Viv~-D~~p~~a~~A~~~G~~~-~sL~eal~~ADVVilt~gt~~iI~ 281 (436)
T 3h9u_A 208 MIAGKTACVCGYGDVGKGCAAALRGFGA----RVVVT-EVDPINALQAAMEGYQV-LLVEDVVEEAHIFVTTTGNDDIIT 281 (436)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCSCSBC
T ss_pred cccCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-CCChhhhHHHHHhCCee-cCHHHHHhhCCEEEECCCCcCccC
Confidence 3457899999999999999999999998 99999 99997776666678765 478899999999998765433 22
Q ss_pred HHHHHhchhcCCCCEEEEEcCC---CCHHHHHH
Q 024121 86 DVAMQIRPLLSRKKLLVSVAAG---VKLKDLQE 115 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~~---~~~~~l~~ 115 (272)
.+....++++.++|++..+ +..+.+.+
T Consensus 282 ---~e~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 282 ---SEHFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp ---TTTGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred ---HHHHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 2334456889999987654 33445544
No 176
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.70 E-value=8e-08 Score=83.84 Aligned_cols=88 Identities=15% Similarity=0.308 Sum_probs=66.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcE-EEEeCCCHHHHHHHHH-cC----ceeecCchhhhc--cCCEEEE
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKS-GVLPPDRI-CTAVHSNLKRRDAFES-IG----VKVLSDNNAVVE--YSDVVVF 77 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V-~v~~~r~~~~~~~l~~-~g----~~~~~~~~~~~~--~aDivil 77 (272)
+++++||||||+|.||..++..|.+. ++ ++ .++ +|++++++.+.+ .| .....+.+++++ +.|+|++
T Consensus 3 ~~~~~~vgiiG~G~ig~~~~~~l~~~~~~----~lv~v~-d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 3 TETQIRIGVMGCADIARKVSRAIHLAPNA----TISGVA-SRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp ---CEEEEEESCCTTHHHHHHHHHHCTTE----EEEEEE-CSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEE
T ss_pred CCCceEEEEECchHHHHHHHHHHhhCCCc----EEEEEE-cCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEE
Confidence 45678999999999999999998875 34 55 577 999998887766 55 466778888876 5999999
Q ss_pred eeCcccHHHHHHHhchhcCCCCEEE
Q 024121 78 SVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 78 ~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
|+|+....+++... +..|+.|+
T Consensus 78 ~tp~~~h~~~~~~a---l~aGk~V~ 99 (362)
T 1ydw_A 78 PLPTSLHVEWAIKA---AEKGKHIL 99 (362)
T ss_dssp CCCGGGHHHHHHHH---HTTTCEEE
T ss_pred cCChHHHHHHHHHH---HHCCCeEE
Confidence 99998776666544 34566555
No 177
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.69 E-value=1.3e-07 Score=81.40 Aligned_cols=95 Identities=12% Similarity=0.177 Sum_probs=69.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--------c----CceeecCchhhhccCCEEEE
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--------I----GVKVLSDNNAVVEYSDVVVF 77 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~--------~----g~~~~~~~~~~~~~aDivil 77 (272)
.|||+|||+|.||.+++..|...|+. +|.+| |+++++++.... . .+..+.+..+++++||+||+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~---~V~L~-D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~ 84 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELA---DVVLY-DVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIV 84 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC---EEEEE-CSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC---eEEEE-ECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEE
Confidence 37999999999999999999998863 69999 999876654211 1 13345677768999999999
Q ss_pred ee--Cc--cc-----------------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 78 SV--KP--QV-----------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 78 ~v--~~--~~-----------------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
++ |. .. ++++..++.++. |+.+++..+++..
T Consensus 85 a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 85 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLD 136 (331)
T ss_dssp CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred ccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchH
Confidence 98 42 12 566777777764 7777775555443
No 178
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.69 E-value=2.8e-08 Score=85.57 Aligned_cols=101 Identities=16% Similarity=0.184 Sum_probs=68.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHH-cCce-eecCchhhhc--cCCEEEEeeCcc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFES-IGVK-VLSDNNAVVE--YSDVVVFSVKPQ 82 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~aDivil~v~~~ 82 (272)
|+++||||||+|.||..++..|.+.+. .++. ++ +|++++++++.+ .|+. .+.+.++++. +.|+|++|+|+.
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~---~~~~av~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGN---GEVVAVS-SRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQ 78 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCS---EEEEEEE-CSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGG
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCC---cEEEEEE-cCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcH
Confidence 356799999999999999999887642 1554 67 999998877766 5764 7788899887 799999999988
Q ss_pred cHHHHHHHhchhcCCCCEEE-EEcCCCCHHHHHH
Q 024121 83 VVKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQE 115 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~ii-s~~~~~~~~~l~~ 115 (272)
...+++.... ..|+-|+ .-.-+.+.+..++
T Consensus 79 ~h~~~~~~al---~aGk~Vl~EKP~a~~~~e~~~ 109 (329)
T 3evn_A 79 DHYKVAKAAL---LAGKHVLVEKPFTLTYDQANE 109 (329)
T ss_dssp GHHHHHHHHH---HTTCEEEEESSCCSSHHHHHH
T ss_pred HHHHHHHHHH---HCCCeEEEccCCcCCHHHHHH
Confidence 7666655433 3455444 3222344444433
No 179
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.67 E-value=7.4e-08 Score=86.55 Aligned_cols=113 Identities=12% Similarity=0.201 Sum_probs=76.9
Q ss_pred CCeEEEEcccHH-HHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHH----------cC--ceeecCchhhhccCCE
Q 024121 10 SFILGFIGAGKM-AESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFES----------IG--VKVLSDNNAVVEYSDV 74 (272)
Q Consensus 10 ~~~IgiIG~G~m-G~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~----------~g--~~~~~~~~~~~~~aDi 74 (272)
.+||+|||+|.+ |.+++..|.+. +. +..+|.+| |+++++++.... .. +..+.|..+++++||+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l-~~~eV~L~-Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~ 105 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEF-PIRKLKLY-DNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDF 105 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTS-CEEEEEEE-CSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCC-CCCEEEEE-eCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCE
Confidence 469999999998 66688778876 22 22389999 999987654221 12 3344566788999999
Q ss_pred EEEeeCccc------------------------------------HHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHH
Q 024121 75 VVFSVKPQV------------------------------------VKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEW 116 (272)
Q Consensus 75 vil~v~~~~------------------------------------~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~ 116 (272)
||++++... +.++++.+..+ .|+..++..++++.. ..+.+.
T Consensus 106 VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~-~P~A~ii~~TNPvdi~T~~~~k~ 184 (472)
T 1u8x_X 106 VMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY-SPDAWMLNYSNPAAIVAEATRRL 184 (472)
T ss_dssp EEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSCHHHHHHHHHHH
T ss_pred EEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHHh
Confidence 999997632 34555556554 588888888777654 334444
Q ss_pred hCCCCEEEE
Q 024121 117 TGHSRFIRV 125 (272)
Q Consensus 117 ~~~~~~~~~ 125 (272)
.+..++++.
T Consensus 185 ~p~~rViG~ 193 (472)
T 1u8x_X 185 RPNSKILNI 193 (472)
T ss_dssp STTCCEEEC
T ss_pred CCCCCEEEe
Confidence 454567764
No 180
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.65 E-value=1.1e-07 Score=85.02 Aligned_cols=87 Identities=21% Similarity=0.269 Sum_probs=65.7
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcE-EEEeCCCHHHHHHHHH-cCce-----eecCchhhhc--cCCEEE
Q 024121 8 AESFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRI-CTAVHSNLKRRDAFES-IGVK-----VLSDNNAVVE--YSDVVV 76 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~-~la~~l~~~-g~~~~~~V-~v~~~r~~~~~~~l~~-~g~~-----~~~~~~~~~~--~aDivi 76 (272)
++.+||||||+|.||. .++..|.+. ++ ++ .++ ++++++++.+.+ .|+. .+.+.+++++ +.|+|+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~----~lvav~-d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~ 155 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHS----RIEALV-SGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVY 155 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSE----EEEEEE-CSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEE
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCc----EEEEEE-cCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEE
Confidence 4567999999999997 899888765 34 55 577 999998887766 5653 5678888886 799999
Q ss_pred EeeCcccHHHHHHHhchhcCCCCEEE
Q 024121 77 FSVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 77 l~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+|+|+....+++.... ..|+-|+
T Consensus 156 iatp~~~h~~~~~~al---~aGk~Vl 178 (433)
T 1h6d_A 156 IILPNSLHAEFAIRAF---KAGKHVM 178 (433)
T ss_dssp ECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred EcCCchhHHHHHHHHH---HCCCcEE
Confidence 9999887766665443 3455444
No 181
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.65 E-value=3.4e-08 Score=85.93 Aligned_cols=92 Identities=11% Similarity=0.125 Sum_probs=69.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeec-------------------------
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLS------------------------- 63 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~------------------------- 63 (272)
...||+|||+|.||..+++.+...|. +|++| ||++++.+.+.+.|.....
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa----~V~v~-D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA----KTTGY-DVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC----EEEEE-CSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence 34689999999999999999999998 99999 9999998888877765322
Q ss_pred CchhhhccCCEEEEee--CcccHHHHH-HHhchhcCCCCEEEEEc
Q 024121 64 DNNAVVEYSDVVVFSV--KPQVVKDVA-MQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 64 ~~~~~~~~aDivil~v--~~~~~~~v~-~~l~~~l~~~~~iis~~ 105 (272)
+..+.++++|+||.++ |......++ +++...++++.+||+++
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 3457788999999986 432111111 33444467899999874
No 182
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.64 E-value=4.6e-08 Score=83.52 Aligned_cols=87 Identities=16% Similarity=0.224 Sum_probs=64.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cCc--eeecCchhhhccCCEEEEeeCc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IGV--KVLSDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----~g~--~~~~~~~~~~~~aDivil~v~~ 81 (272)
+.++++|||+|.||..++..|.+.. +..+|.+| ||+ +++++.+ .|+ ..+ +.+++++++|+||+|+|.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~-~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s 193 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARF--ALEAILVH-DPY--ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRS 193 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHS--CCCEEEEE-CTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCC
T ss_pred CCcEEEEECccHHHHHHHHHHHHhC--CCcEEEEE-CCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCC
Confidence 5679999999999999999998742 12489999 999 5555543 355 445 888999999999999986
Q ss_pred ccHHHHHHHhchhcCCCCEEEEEc
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~~ 105 (272)
.. .++. .+.+++++.|+++.
T Consensus 194 ~~--pvl~--~~~l~~G~~V~~vG 213 (313)
T 3hdj_A 194 TT--PLFA--GQALRAGAFVGAIG 213 (313)
T ss_dssp SS--CSSC--GGGCCTTCEEEECC
T ss_pred CC--cccC--HHHcCCCcEEEECC
Confidence 52 2222 24578898887663
No 183
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.64 E-value=1.7e-07 Score=80.47 Aligned_cols=94 Identities=11% Similarity=0.115 Sum_probs=67.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH----------cC--ceeecCchhhhccCCEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES----------IG--VKVLSDNNAVVEYSDVVV 76 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~----------~g--~~~~~~~~~~~~~aDivi 76 (272)
.++||+|||+|.||.+++..|...|+. +|.++ |+++++++.... .. +..+.+. +++++||+||
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~---~v~L~-Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi 77 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLG---DVVLF-DIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVI 77 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC---EEEEE-CSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC---eEEEE-eCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEE
Confidence 457999999999999999999999873 59999 999876653211 12 3334565 7789999999
Q ss_pred Eee--Ccc-------------------cHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 77 FSV--KPQ-------------------VVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 77 l~v--~~~-------------------~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
+++ |.. .++++..++.++. |+.+++..+++.
T Consensus 78 ~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~ 129 (322)
T 1t2d_A 78 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPV 129 (322)
T ss_dssp ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSH
T ss_pred EeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCCh
Confidence 998 421 2456666777664 777776555544
No 184
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.63 E-value=7.5e-08 Score=83.95 Aligned_cols=87 Identities=21% Similarity=0.340 Sum_probs=66.1
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-c-CceeecCchhhhcc--CCEEEEeeC
Q 024121 8 AESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-I-GVKVLSDNNAVVEY--SDVVVFSVK 80 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~-la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~-g~~~~~~~~~~~~~--aDivil~v~ 80 (272)
|+.+||||||+|.||.. ++..|.+. +. ++. ++ +|++++++.+.+ . +..++.|.++++++ .|+|++|+|
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDI----RIVAAC-DSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTE----EEEEEE-CSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCc----EEEEEE-cCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC
Confidence 45679999999999985 88888775 44 665 77 999999888777 3 56778899998874 599999999
Q ss_pred cccHHHHHHHhchhcCCCCEEE
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+....+++.... ..|+-|+
T Consensus 78 ~~~H~~~~~~al---~aGkhVl 96 (359)
T 3m2t_A 78 PQLHFEMGLLAM---SKGVNVF 96 (359)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HCCCeEE
Confidence 887666654433 3455544
No 185
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.62 E-value=5.6e-08 Score=84.88 Aligned_cols=89 Identities=12% Similarity=0.144 Sum_probs=67.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee------ecCchhhhccCCEEEEeeCcc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV------LSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~------~~~~~~~~~~aDivil~v~~~ 82 (272)
..+||+|||+|.||++++..|.+. + +|+++ +|++++++.+.+..... ..+..++++++|+||.|+|+.
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~----~V~V~-~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~ 88 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-F----DVYIG-DVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-S----EEEEE-ESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-C----eEEEE-ECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChh
Confidence 457999999999999999999988 7 99999 99999998887633111 123456788999999999877
Q ss_pred cHHHHHHHhchhcCCCCEEEEEcC
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
....+... .+..++.+++++.
T Consensus 89 ~~~~v~~a---~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 89 LGFKSIKA---AIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHH---HHHTTCCEEECCC
T ss_pred hhHHHHHH---HHHhCCeEEEccC
Confidence 54455433 3457888888653
No 186
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.62 E-value=1.4e-07 Score=84.13 Aligned_cols=114 Identities=15% Similarity=0.248 Sum_probs=77.6
Q ss_pred CCCCeEEEEcccHH--HHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc---------CceeecCchhhhccCCEEE
Q 024121 8 AESFILGFIGAGKM--AESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI---------GVKVLSDNNAVVEYSDVVV 76 (272)
Q Consensus 8 ~~~~~IgiIG~G~m--G~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~---------g~~~~~~~~~~~~~aDivi 76 (272)
|+.+||+|||+|.| |..++..|+....+.. +|++| |++++++++.... .+..+.|..+++++||+||
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~-Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI 80 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALY-DLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVI 80 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEE-CSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEE
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEE-eCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEE
Confidence 35679999999996 6899998887432222 89999 9999887655431 2456678888999999999
Q ss_pred EeeCccc--------------------------------------HHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHH
Q 024121 77 FSVKPQV--------------------------------------VKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEW 116 (272)
Q Consensus 77 l~v~~~~--------------------------------------~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~ 116 (272)
+++++.. +.++++.+..+ .|+..++..++++.. ..+.+.
T Consensus 81 ~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~-~p~a~~i~~tNPvdi~t~~~~k~ 159 (450)
T 3fef_A 81 ISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDY-APESWVINYTNPMSVCTRVLYKV 159 (450)
T ss_dssp ECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHH
T ss_pred eccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHH-CCCeEEEEecCchHHHHHHHHHH
Confidence 9997531 33444445444 477788887776653 233344
Q ss_pred hCCCCEEE
Q 024121 117 TGHSRFIR 124 (272)
Q Consensus 117 ~~~~~~~~ 124 (272)
++..++++
T Consensus 160 ~p~~rviG 167 (450)
T 3fef_A 160 FPGIKAIG 167 (450)
T ss_dssp CTTCEEEE
T ss_pred CCCCCEEE
Confidence 55445554
No 187
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.61 E-value=1.5e-07 Score=84.78 Aligned_cols=90 Identities=12% Similarity=0.130 Sum_probs=72.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-HH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-VK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~~ 85 (272)
....++|+|||+|.||..+++.+...|. +|+++ ++++++.+...+.|+.. .+..++++++|+||.|++... +.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga----~Viv~-d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atgt~~~i~ 344 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA----RVSVT-EIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATGNKDIIM 344 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSSSSCSBC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCCCHHHHH
Confidence 3456899999999999999999999998 99999 99999887777788874 466788899999999997554 32
Q ss_pred -HHHHHhchhcCCCCEEEEEcC
Q 024121 86 -DVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 86 -~v~~~l~~~l~~~~~iis~~~ 106 (272)
+.+ ..++++.+++++..
T Consensus 345 ~~~l----~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 345 LEHI----KAMKDHAILGNIGH 362 (494)
T ss_dssp HHHH----HHSCTTCEEEECSS
T ss_pred HHHH----HhcCCCcEEEEeCC
Confidence 333 34678888887643
No 188
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.61 E-value=1.6e-07 Score=80.96 Aligned_cols=87 Identities=16% Similarity=0.251 Sum_probs=65.3
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHH-c-CceeecCchhhhc--cCCEEEEeeCc
Q 024121 8 AESFILGFIGAGKMAE-SIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFES-I-GVKVLSDNNAVVE--YSDVVVFSVKP 81 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~-~la~~l~~~g~~~~~~V-~v~~~r~~~~~~~l~~-~-g~~~~~~~~~~~~--~aDivil~v~~ 81 (272)
|+++||||||+|.+|. .++..|...++ +| .++ ++++++++.+.+ . ++..+.|.+++++ +.|+|++|+|+
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~~----~lvav~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAGA----ELAGVF-ESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIP 76 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTTC----EEEEEE-CSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCG
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCCc----EEEEEe-CCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCCh
Confidence 4678999999999996 67777776677 76 577 999999888776 4 5677788888886 68999999998
Q ss_pred ccHHHHHHHhchhcCCCCEEE
Q 024121 82 QVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~ii 102 (272)
....++.... +..|+-|+
T Consensus 77 ~~h~~~~~~a---l~aGkhVl 94 (336)
T 2p2s_A 77 CDRAELALRT---LDAGKDFF 94 (336)
T ss_dssp GGHHHHHHHH---HHTTCEEE
T ss_pred hhHHHHHHHH---HHCCCcEE
Confidence 8765555443 23455444
No 189
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.60 E-value=4.3e-08 Score=84.15 Aligned_cols=96 Identities=11% Similarity=0.067 Sum_probs=64.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~ 86 (272)
|+.+||+|||+|+||+.+++.+.+.+. .++ .++ ++++++ ++. .|+..+.+.++++.++|+||+|+|++...+
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~---~elvav~-d~~~~~--~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~~ 73 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPD---MDLVGIF-SRRATL--DTK-TPVFDVADVDKHADDVDVLFLCMGSATDIP 73 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSS---EEEEEEE-ESSSCC--SSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCC---CEEEEEE-cCCHHH--hhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHHH
Confidence 356799999999999999999987632 154 577 888654 222 566666777787788999999999885433
Q ss_pred HHHHhchhcCCCCEEEEE-cCCCCHHHH
Q 024121 87 VAMQIRPLLSRKKLLVSV-AAGVKLKDL 113 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~-~~~~~~~~l 113 (272)
.+.. .+..++.++.. ..+.+.+.+
T Consensus 74 ~~~~---al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 74 EQAP---KFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp HHHH---HHTTTSEEECCCCCGGGHHHH
T ss_pred HHHH---HHHCCCEEEECCCCcCCHHHH
Confidence 3322 23456655532 223444444
No 190
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.60 E-value=2.5e-07 Score=80.66 Aligned_cols=102 Identities=9% Similarity=0.149 Sum_probs=69.4
Q ss_pred CCCCCCCeEEEEcccHHHH-HHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHH-cC-ceeecCchhhhcc--CCEEEEe
Q 024121 5 PIPAESFILGFIGAGKMAE-SIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFES-IG-VKVLSDNNAVVEY--SDVVVFS 78 (272)
Q Consensus 5 ~~~~~~~~IgiIG~G~mG~-~la~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~-~g-~~~~~~~~~~~~~--aDivil~ 78 (272)
..||+.+||||||+|.+|. .++..+...+. +|. ++ ++++++++.+.+ .| ...+.|.++++++ .|+|++|
T Consensus 21 ~~Mm~~irvgiiG~G~~~~~~~~~~~~~~~~----~lvav~-d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~ 95 (361)
T 3u3x_A 21 QSMMDELRFAAVGLNHNHIYGQVNCLLRAGA----RLAGFH-EKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSA 95 (361)
T ss_dssp -----CCEEEEECCCSTTHHHHHHHHHHTTC----EEEEEE-CSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEEC
T ss_pred hhhccCcEEEEECcCHHHHHHHHHHhhcCCc----EEEEEE-cCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEe
Confidence 3466678999999999994 56777766676 765 66 999999988876 55 5678899998875 8999999
Q ss_pred eCcccHHHHHHHhchhcCCCCEEEEEcCC--CCHHHHHH
Q 024121 79 VKPQVVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQE 115 (272)
Q Consensus 79 v~~~~~~~v~~~l~~~l~~~~~iis~~~~--~~~~~l~~ 115 (272)
+|+....++..... ..|+-|+. -++ .+.++.++
T Consensus 96 tp~~~H~~~~~~al---~aGkhVl~-EKPla~~~~ea~~ 130 (361)
T 3u3x_A 96 AVSSERAELAIRAM---QHGKDVLV-DKPGMTSFDQLAK 130 (361)
T ss_dssp CCHHHHHHHHHHHH---HTTCEEEE-ESCSCSSHHHHHH
T ss_pred CChHHHHHHHHHHH---HCCCeEEE-eCCCCCCHHHHHH
Confidence 99886655554433 34554442 233 34444443
No 191
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.59 E-value=5.4e-07 Score=77.37 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=70.0
Q ss_pred CCCCCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeecCchhhhcc
Q 024121 1 MDAFPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEY 71 (272)
Q Consensus 1 ~~~~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~ 71 (272)
|.++++. +.+||+|||+|.+|.+++..|...++. .+|.++ |+++++++.... . .+.+..+..+++++
T Consensus 1 ~~~~~~~-~~~KI~IiGaG~vG~~la~~l~~~~~~--~el~L~-Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~ 76 (326)
T 2zqz_A 1 MASITDK-DHQKVILVGDGAVGSSYAYAMVLQGIA--QEIGIV-DIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp -----CC-CCCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGG
T ss_pred CCccccC-CCCEEEEECCCHHHHHHHHHHHcCCCC--CEEEEE-eCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCC
Confidence 5566666 458999999999999999999888753 489999 999887654222 1 23444456777999
Q ss_pred CCEEEEeeCcc----------------cHHHHHHHhchhcCCCCEEEEEcCCCCH
Q 024121 72 SDVVVFSVKPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (272)
Q Consensus 72 aDivil~v~~~----------------~~~~v~~~l~~~l~~~~~iis~~~~~~~ 110 (272)
||+||++.+.. .++++.+.+..+ .|+..++..++++..
T Consensus 77 aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~~ 130 (326)
T 2zqz_A 77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPVDI 130 (326)
T ss_dssp CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSSHHH
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCcHHH
Confidence 99999997421 123344455555 577777767665543
No 192
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.58 E-value=4.5e-07 Score=77.61 Aligned_cols=97 Identities=15% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH----H-c-----CceeecCchhhhccCCEEEEe
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE----S-I-----GVKVLSDNNAVVEYSDVVVFS 78 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~----~-~-----g~~~~~~~~~~~~~aDivil~ 78 (272)
+.+||+|||+|.||++++..|...|.. .+|.++ |+++++.+... . . ...+..+..+.+++||+||++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~--~ev~l~-Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia 81 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIA--DEIVLI-DANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVIC 81 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCC--CEEEEE-eCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEc
Confidence 457999999999999999999887742 379999 99987554321 1 1 234444556778999999999
Q ss_pred eCccc----------------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 79 VKPQV----------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 79 v~~~~----------------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
.+... +.++.+.+..+. |+..++-.++++.
T Consensus 82 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv~ 127 (316)
T 1ldn_A 82 AGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPVD 127 (316)
T ss_dssp CSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHH
T ss_pred CCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCchH
Confidence 75321 334555565654 6666665656443
No 193
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.57 E-value=7.7e-08 Score=84.37 Aligned_cols=91 Identities=12% Similarity=0.185 Sum_probs=68.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee---------------------------
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL--------------------------- 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~--------------------------- 62 (272)
..||+|||+|.+|..+++.+...|. +|++| |+++++.+.+.+.|....
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa----~V~v~-D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~ 264 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGA----VVSAT-DVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVK 264 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSTTHHHHHHHTTCEECCCCC-----------------CHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhh
Confidence 4689999999999999999999998 99999 999998888877765421
Q ss_pred --cCchhhhccCCEEEEee--CcccHHHHH-HHhchhcCCCCEEEEEc
Q 024121 63 --SDNNAVVEYSDVVVFSV--KPQVVKDVA-MQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 63 --~~~~~~~~~aDivil~v--~~~~~~~v~-~~l~~~l~~~~~iis~~ 105 (272)
.+..+.++++|+||.|+ |......++ ++....++++.+||+++
T Consensus 265 ~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 265 QAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 13456788999999996 432111111 33445568999999875
No 194
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.56 E-value=1.4e-07 Score=80.30 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=55.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHcCce--eecCchhhhccCCEEEEeeCcccH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESIGVK--VLSDNNAVVEYSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~~g~~--~~~~~~~~~~~aDivil~v~~~~~ 84 (272)
+.+||+|||+|+||..++..|.+. ++ ++. ++ +|++++++. .|+. ..++..+. .++|+||+|+|+...
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~----elvav~-d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h 78 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDF----EIAGIV-RRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREV 78 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTE----EEEEEE-CC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCC----EEEEEE-cCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhh
Confidence 457999999999999999999874 44 766 67 999887654 5543 23344443 689999999998876
Q ss_pred HHHHHHhchhcCCCCEEEEE
Q 024121 85 KDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~ 104 (272)
.+..... +..++.+++.
T Consensus 79 ~~~~~~a---l~aG~~Vi~e 95 (304)
T 3bio_A 79 ERTALEI---LKKGICTADS 95 (304)
T ss_dssp HHHHHHH---HTTTCEEEEC
T ss_pred HHHHHHH---HHcCCeEEEC
Confidence 6665544 3456777743
No 195
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.56 E-value=6.2e-07 Score=68.28 Aligned_cols=94 Identities=9% Similarity=0.023 Sum_probs=64.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC-HHHHHHHHH---cCceee-cC------chhh-hccCCEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN-LKRRDAFES---IGVKVL-SD------NNAV-VEYSDVVV 76 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~-~~~~~~l~~---~g~~~~-~~------~~~~-~~~aDivi 76 (272)
..++|.|+|+|.+|+.+++.|.+.|+ +|++. +++ +++.+.+.. .|+.+. .| ..++ ++++|+||
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~----~V~vi-d~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ----NVTVI-SNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC----CEEEE-ECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 45789999999999999999999999 99999 997 565555543 355432 12 1222 67899999
Q ss_pred EeeCcccHHHHHHHhchhcCCCCEEEEEcCC
Q 024121 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 77 l~v~~~~~~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
++++++.....+......+.+...++...+.
T Consensus 77 ~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 77 ALSDNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp ECSSCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred EecCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 9998876655554444444344444433333
No 196
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.55 E-value=2.3e-07 Score=82.02 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=68.3
Q ss_pred CCCCCCeEEEEcccH---HHHHHHHHHHhCC-CCCCCcEE--EEeCCCHHHHHHHHH-cCc---eeecCchhhhcc----
Q 024121 6 IPAESFILGFIGAGK---MAESIAKGVAKSG-VLPPDRIC--TAVHSNLKRRDAFES-IGV---KVLSDNNAVVEY---- 71 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~---mG~~la~~l~~~g-~~~~~~V~--v~~~r~~~~~~~l~~-~g~---~~~~~~~~~~~~---- 71 (272)
.+|+.+||||||+|. ||...+..+...+ + ++. ++ ++++++++.+.+ .|+ ..+.|.++++++
T Consensus 8 ~~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~----~lva~v~-d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~ 82 (398)
T 3dty_A 8 RIPQPIRWAMVGGGSQSQIGYIHRCAALRDNTF----VLVAGAF-DIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARR 82 (398)
T ss_dssp CSCSCEEEEEEECCTTCSSHHHHHHHHHGGGSE----EEEEEEC-CSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTC
T ss_pred cccCcceEEEEcCCccchhHHHHHHHHhhCCCe----EEEEEEe-CCCHHHHHHHHHHhCCCcceeeCCHHHHHhccccc
Confidence 345678999999999 9999988887765 4 665 57 999999988776 777 577888888865
Q ss_pred ---CCEEEEeeCcccHHHHHHHhchhcCCCCEEE
Q 024121 72 ---SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 72 ---aDivil~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
.|+|++|+|+....++..... ..|+-|+
T Consensus 83 ~~~vD~V~i~tp~~~H~~~~~~al---~aGkhVl 113 (398)
T 3dty_A 83 ADGIQAVSIATPNGTHYSITKAAL---EAGLHVV 113 (398)
T ss_dssp TTCCSEEEEESCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCCCCEEEECCCcHHHHHHHHHHH---HCCCeEE
Confidence 899999999887666654433 3455554
No 197
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.53 E-value=4.1e-07 Score=80.71 Aligned_cols=95 Identities=19% Similarity=0.280 Sum_probs=65.3
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCC-----CCCcEE-EEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCC
Q 024121 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVL-----PPDRIC-TAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSD 73 (272)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~-----~~~~V~-v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aD 73 (272)
|..|.+.+||||||+|.||...+..+.+.+.. ...+|. ++ ++++++++++.+ .|+ .++.|.+++++ +.|
T Consensus 20 ~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~-d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD 98 (412)
T 4gqa_A 20 FQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALA-DQDQAMAERHAAKLGAEKAYGDWRELVNDPQVD 98 (412)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEE-CSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCC
T ss_pred cccccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEE-cCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCC
Confidence 34555567999999999999988888764310 001444 66 999999988877 676 57788889886 589
Q ss_pred EEEEeeCcccHHHHHHHhchhcCCCCEEE
Q 024121 74 VVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 74 ivil~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+|++|+|+....++..... ..|+-|+
T Consensus 99 ~V~I~tp~~~H~~~~~~al---~aGkhVl 124 (412)
T 4gqa_A 99 VVDITSPNHLHYTMAMAAI---AAGKHVY 124 (412)
T ss_dssp EEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred EEEECCCcHHHHHHHHHHH---HcCCCeE
Confidence 9999999887665554433 3455444
No 198
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.53 E-value=3.3e-07 Score=80.71 Aligned_cols=85 Identities=16% Similarity=0.248 Sum_probs=66.4
Q ss_pred CCeEEEEccc-HHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhcc--CCEEEEeeCccc
Q 024121 10 SFILGFIGAG-KMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEY--SDVVVFSVKPQV 83 (272)
Q Consensus 10 ~~~IgiIG~G-~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~--aDivil~v~~~~ 83 (272)
.+||||||+| .||..++..|.+. ++ ++. ++ ++++++++.+.+ .|+..+.|.++++++ .|+|++|+|+..
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~ 76 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDA----QIVAAC-DPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQF 76 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTE----EEEEEE-CSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGG
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCe----EEEEEE-eCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHH
Confidence 4799999999 9999999999875 33 554 67 999998887766 688888899998874 999999999887
Q ss_pred HHHHHHHhchhcCCCCEEE
Q 024121 84 VKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~ii 102 (272)
..++..... ..++-|+
T Consensus 77 H~~~~~~al---~aGk~Vl 92 (387)
T 3moi_A 77 HCEHVVQAS---EQGLHII 92 (387)
T ss_dssp HHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHH---HCCCcee
Confidence 666654433 3455554
No 199
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.52 E-value=9.8e-08 Score=71.77 Aligned_cols=102 Identities=14% Similarity=0.204 Sum_probs=73.1
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccH
Q 024121 10 SFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVV 84 (272)
Q Consensus 10 ~~~IgiIG~----G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~ 84 (272)
..+|+|||+ |++|..++++|.+.|| + +| ++|+.+.. .+ .|+.+..+..|+.+..|++++++|++.+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~----~--v~-~vnp~~~~--~~i~G~~~~~sl~el~~~vDlavi~vp~~~~ 83 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGY----R--VL-PVNPRFQG--EELFGEEAVASLLDLKEPVDILDVFRPPSAL 83 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTC----E--EE-EECGGGTT--SEETTEECBSSGGGCCSCCSEEEECSCHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCC----E--EE-EeCCCccc--CcCCCEEecCCHHHCCCCCCEEEEEeCHHHH
Confidence 468999999 8999999999999999 7 55 66665311 11 5788888888888889999999999888
Q ss_pred HHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhC--CCCEE
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG--HSRFI 123 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~--~~~~~ 123 (272)
.++++++... ....+|+. ++...+.+.+... +.+++
T Consensus 84 ~~v~~~~~~~-gi~~i~~~--~g~~~~~~~~~a~~~Gir~v 121 (140)
T 1iuk_A 84 MDHLPEVLAL-RPGLVWLQ--SGIRHPEFEKALKEAGIPVV 121 (140)
T ss_dssp TTTHHHHHHH-CCSCEEEC--TTCCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHc-CCCEEEEc--CCcCHHHHHHHHHHcCCEEE
Confidence 8888776654 23445553 4444455544432 34444
No 200
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.52 E-value=4.6e-07 Score=78.56 Aligned_cols=86 Identities=13% Similarity=0.252 Sum_probs=63.7
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCCEEEEeeCc
Q 024121 9 ESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVKP 81 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~-la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDivil~v~~ 81 (272)
+++||||||+|.||.. ++..+.+. +. +|. ++ ++++++++++.+ .|+ .+++|.+++++ +.|+|++|+|+
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~~----~lvav~-d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~ 96 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAENC----VVTAIA-SRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPT 96 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSSE----EEEEEE-CSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCG
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCCe----EEEEEE-CCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCC
Confidence 4579999999999975 56666664 33 665 66 999999988877 676 57788899875 58999999998
Q ss_pred ccHHHHHHHhchhcCCCCEEE
Q 024121 82 QVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~ii 102 (272)
....++..... ..|+-|+
T Consensus 97 ~~H~~~~~~al---~aGkhVl 114 (350)
T 4had_A 97 SQHIEWSIKAA---DAGKHVV 114 (350)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred chhHHHHHHHH---hcCCEEE
Confidence 87666554433 3455444
No 201
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.52 E-value=8.8e-07 Score=75.84 Aligned_cols=112 Identities=17% Similarity=0.208 Sum_probs=71.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHHc-----CceeecCchhhhccCCEEEEeeC
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FESI-----GVKVLSDNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~----l~~~-----g~~~~~~~~~~~~~aDivil~v~ 80 (272)
.+||+|||+|.+|.+++..|...|+. .+|.++ |+++++++. +... .+.+..+..+++++||+||++++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~--~ev~L~-Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g 83 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTA--NELVLI-DVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAG 83 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCS--SEEEEE-CCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCC
Confidence 47999999999999999999998763 489999 999876442 2221 22333344667899999999984
Q ss_pred ccc----------------HHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHH--hCCCCEEEE
Q 024121 81 PQV----------------VKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEW--TGHSRFIRV 125 (272)
Q Consensus 81 ~~~----------------~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~--~~~~~~~~~ 125 (272)
... +.++.+.+.++ .|+.+++..+++... ..+.+. ++..++++.
T Consensus 84 ~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 84 ANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp C------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCcHHHHHHHHHHHcCCCHHHEecc
Confidence 221 35566666666 577777766554432 122333 334567765
No 202
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.52 E-value=9.3e-07 Score=75.78 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=68.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH------cCceeecCchhhhccCCEEEEe
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES------IGVKVLSDNNAVVEYSDVVVFS 78 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~----l~~------~g~~~~~~~~~~~~~aDivil~ 78 (272)
..+||+|||+|.||++++..|...|+. .+|.++ |+++++++. +.. .++.+..+..+++++||+||++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~--~~l~l~-D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ 80 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGIT--DELVVI-DVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCIC 80 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--ceEEEE-ecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEe
Confidence 457999999999999999999998863 389999 999887664 433 1344444455678999999999
Q ss_pred eC----ccc------------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 79 VK----PQV------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 79 v~----~~~------------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
.. |.. ++++.+.+..+ .|+..++..+++..
T Consensus 81 ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNPvd 126 (326)
T 3pqe_A 81 AGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNPVD 126 (326)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred cccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCChHH
Confidence 72 111 22333445444 57777777766544
No 203
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.51 E-value=1e-06 Score=75.35 Aligned_cols=97 Identities=13% Similarity=0.203 Sum_probs=67.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHH----HH------cCceeecCchhhhccCCEEEEe
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAF----ES------IGVKVLSDNNAVVEYSDVVVFS 78 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l----~~------~g~~~~~~~~~~~~~aDivil~ 78 (272)
+.+||+|||+|.+|.+++..|...|.. .+|.++ |+++++++.. .. ..+.+..+..+++++||+||++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~--~ei~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ 81 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIV--DELVII-DLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVIC 81 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSC--SEEEEE-CSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEEC
Confidence 557999999999999999999988742 389999 9998765431 11 1234444567779999999999
Q ss_pred eCcc----------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 79 VKPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 79 v~~~----------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
.+.. .+.++.+.+.++ .|+.+++..+++..
T Consensus 82 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~ 127 (317)
T 3d0o_A 82 AGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPVD 127 (317)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCcHH
Confidence 8321 133444555555 57777776655443
No 204
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.51 E-value=7.6e-07 Score=76.97 Aligned_cols=88 Identities=15% Similarity=0.243 Sum_probs=66.8
Q ss_pred CCCCCeEEEEccc-HHHHHHHHHHHhC--CCCCCCcE-EEEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCCEEEEe
Q 024121 7 PAESFILGFIGAG-KMAESIAKGVAKS--GVLPPDRI-CTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFS 78 (272)
Q Consensus 7 ~~~~~~IgiIG~G-~mG~~la~~l~~~--g~~~~~~V-~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDivil~ 78 (272)
+.+.+||||||+| .+|...+..|.+. ++ ++ .++ ++++++++.+.+ .|+ .++.|.+++++ +.|+|++|
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~----~lvav~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~ 89 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPALKNLSHLF----EITAVT-SRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLT 89 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHHHTTTTTE----EEEEEE-CSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEEC
T ss_pred CCCceeEEEEecCHHHHHHHHHHHHhCCCce----EEEEEE-cCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEe
Confidence 3456799999999 8999999999875 34 55 567 999999988776 676 77888888876 58999999
Q ss_pred eCcccHHHHHHHhchhcCCCCEEE
Q 024121 79 VKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 79 v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+|+....++..... ..|+-|+
T Consensus 90 tp~~~H~~~~~~al---~aGkhVl 110 (340)
T 1zh8_A 90 LPVELNLPFIEKAL---RKGVHVI 110 (340)
T ss_dssp CCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCchHHHHHHHHHH---HCCCcEE
Confidence 99887666654433 3455444
No 205
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.50 E-value=4.6e-07 Score=80.57 Aligned_cols=87 Identities=16% Similarity=0.227 Sum_probs=65.9
Q ss_pred CCCCeEEEEcccH---HHHHHHHHHHhCC-CCCCCcEE--EEeCCCHHHHHHHHH-cCc---eeecCchhhhcc------
Q 024121 8 AESFILGFIGAGK---MAESIAKGVAKSG-VLPPDRIC--TAVHSNLKRRDAFES-IGV---KVLSDNNAVVEY------ 71 (272)
Q Consensus 8 ~~~~~IgiIG~G~---mG~~la~~l~~~g-~~~~~~V~--v~~~r~~~~~~~l~~-~g~---~~~~~~~~~~~~------ 71 (272)
|+.+||||||+|. ||...+..+...+ + ++. ++ ++++++++.+.+ .|+ .++.|.++++++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~----~lva~v~-d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~ 109 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHY----ELVAGAL-SSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKN 109 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCE----EEEEEEC-CSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTT
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCc----EEEEEEe-CCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCC
Confidence 4557999999999 9999888877665 3 654 67 999999888776 677 577888888875
Q ss_pred -CCEEEEeeCcccHHHHHHHhchhcCCCCEEE
Q 024121 72 -SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 72 -aDivil~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
.|+|++|+|+....++..... ..|+-|+
T Consensus 110 ~vD~V~I~tp~~~H~~~~~~al---~aGkhVl 138 (417)
T 3v5n_A 110 GIEAVAIVTPNHVHYAAAKEFL---KRGIHVI 138 (417)
T ss_dssp CCSEEEECSCTTSHHHHHHHHH---TTTCEEE
T ss_pred CCcEEEECCCcHHHHHHHHHHH---hCCCeEE
Confidence 899999999887666654433 4555555
No 206
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.50 E-value=3e-07 Score=79.13 Aligned_cols=108 Identities=18% Similarity=0.251 Sum_probs=77.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc-cHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKD 86 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~-~~~~ 86 (272)
...+++||||+|++|+.+++.+..-|. +|.+| ++.+.. ...+.++.. .+.++++++||+|.+++|-. ..+.
T Consensus 139 l~g~tvGIiG~G~IG~~va~~~~~fg~----~v~~~-d~~~~~--~~~~~~~~~-~~l~ell~~sDivslh~Plt~~T~~ 210 (334)
T 3kb6_A 139 LNRLTLGVIGTGRIGSRVAMYGLAFGM----KVLCY-DVVKRE--DLKEKGCVY-TSLDELLKESDVISLHVPYTKETHH 210 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCH--HHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTTTT
T ss_pred ecCcEEEEECcchHHHHHHHhhcccCc----eeeec-CCccch--hhhhcCcee-cCHHHHHhhCCEEEEcCCCChhhcc
Confidence 345799999999999999999999998 99999 886532 233456554 57889999999999999843 3333
Q ss_pred HH-HHhchhcCCCCEEEEEcCC--CCHHHHHHHhCCCCEE
Q 024121 87 VA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTGHSRFI 123 (272)
Q Consensus 87 v~-~~l~~~l~~~~~iis~~~~--~~~~~l~~~~~~~~~~ 123 (272)
++ .+....++++.++|+++-| +..+.|.+.+...++.
T Consensus 211 li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~ 250 (334)
T 3kb6_A 211 MINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp CBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred CcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCce
Confidence 33 2233456789999988644 3456666666533443
No 207
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.49 E-value=4.5e-07 Score=82.03 Aligned_cols=79 Identities=18% Similarity=0.205 Sum_probs=63.0
Q ss_pred CCCCeEEEEcc----cHHHHHHHHHHHhC--CCCCCCcEE-EEeCCCHHHHHHHHH-cCc---eeecCchhhhc--cCCE
Q 024121 8 AESFILGFIGA----GKMAESIAKGVAKS--GVLPPDRIC-TAVHSNLKRRDAFES-IGV---KVLSDNNAVVE--YSDV 74 (272)
Q Consensus 8 ~~~~~IgiIG~----G~mG~~la~~l~~~--g~~~~~~V~-v~~~r~~~~~~~l~~-~g~---~~~~~~~~~~~--~aDi 74 (272)
|+.+||||||+ |.||...+..|.+. ++ +|. ++ ++++++++.+.+ .|+ ..+.|.+++++ +.|+
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~----~lvav~-d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~ 111 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQF----QIVALY-NPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDM 111 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTE----EEEEEE-CSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSE
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCe----EEEEEE-eCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCE
Confidence 45679999999 99999999999885 55 654 67 999999888776 566 47788888885 6899
Q ss_pred EEEeeCcccHHHHHHHh
Q 024121 75 VVFSVKPQVVKDVAMQI 91 (272)
Q Consensus 75 vil~v~~~~~~~v~~~l 91 (272)
|++|+|+....+++...
T Consensus 112 V~I~tp~~~H~~~~~~a 128 (479)
T 2nvw_A 112 IVVSVKVPEHYEVVKNI 128 (479)
T ss_dssp EEECSCHHHHHHHHHHH
T ss_pred EEEcCCcHHHHHHHHHH
Confidence 99999987655555443
No 208
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.49 E-value=1.1e-06 Score=77.52 Aligned_cols=91 Identities=13% Similarity=0.118 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc-H-
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-V- 84 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~-~- 84 (272)
+...++++|||+|.+|..+++.+...|. +|.++ ++++.+.......|+.+. +.+++++.+|+|++++.... +
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa----~Viv~-d~dp~~a~~A~~~G~~vv-~LeElL~~ADIVv~atgt~~lI~ 317 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA----RVKVT-EVDPICALQAAMDGFEVV-TLDDAASTADIVVTTTGNKDVIT 317 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHTTCEEC-CHHHHGGGCSEEEECCSSSSSBC
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-eCCcchhhHHHhcCceec-cHHHHHhhCCEEEECCCCccccC
Confidence 4566899999999999999999999998 99999 999876655555787764 67899999999999875433 2
Q ss_pred HHHHHHhchhcCCCCEEEEEcCC
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
.+.+.. ++++.++|++.-+
T Consensus 318 ~e~l~~----MK~GAILINvGRg 336 (464)
T 3n58_A 318 IDHMRK----MKDMCIVGNIGHF 336 (464)
T ss_dssp HHHHHH----SCTTEEEEECSSS
T ss_pred HHHHhc----CCCCeEEEEcCCC
Confidence 344433 5788889887543
No 209
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.48 E-value=1.8e-07 Score=79.37 Aligned_cols=94 Identities=13% Similarity=0.148 Sum_probs=67.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCc---eee--cCchhhhccCCEEEEeeCc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGV---KVL--SDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~---~~~--~~~~~~~~~aDivil~v~~ 81 (272)
...+++.|||+|.||.+++..|.+.|. .+|++| +|++++++.+.+ .+. .+. .+..+.+.++|+||.|+|.
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~---~~V~v~-nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAA---ERIDMA-NRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSV 214 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC---SEEEEE-CSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCT
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCC---CEEEEE-eCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCC
Confidence 356899999999999999999999985 289999 999999888876 333 222 2345667899999999986
Q ss_pred ccHHHH--HHHh-chhcCCCCEEEEEcC
Q 024121 82 QVVKDV--AMQI-RPLLSRKKLLVSVAA 106 (272)
Q Consensus 82 ~~~~~v--~~~l-~~~l~~~~~iis~~~ 106 (272)
.....+ . .+ ...++++.++++++.
T Consensus 215 ~~~~~~~~~-~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 215 GMHPRVEVQ-PLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp TCSSCCSCC-SSCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCC-CCCHHHcCCCCEEEEcCC
Confidence 532110 0 01 123567777887643
No 210
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.48 E-value=1.1e-06 Score=78.80 Aligned_cols=88 Identities=17% Similarity=0.213 Sum_probs=64.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcE-EEEeCCCHHHHHHHHH----cC---ceeec----Cchhhhc--c
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKS-GVLPPDRI-CTAVHSNLKRRDAFES----IG---VKVLS----DNNAVVE--Y 71 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V-~v~~~r~~~~~~~l~~----~g---~~~~~----~~~~~~~--~ 71 (272)
+|+.+||||||+|.||...+..|.+. ++ +| .++ ++++++++.+.+ .| ..+.. |.+++++ +
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~~~~----~lvav~-d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~ 91 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARRDDV----EIVAFA-DPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKN 91 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTCTTE----EEEEEE-CSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTT
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhCCCc----EEEEEE-eCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCC
Confidence 45668999999999999999988874 44 65 467 999998877654 35 46666 8888887 5
Q ss_pred CCEEEEeeCcccHHHHHHHhchhcCCCCEEE
Q 024121 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 72 aDivil~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
.|+|++|+|+....++.... +..|+-|+
T Consensus 92 vD~V~i~tp~~~h~~~~~~a---l~aGkhV~ 119 (444)
T 2ixa_A 92 IDAVFVSSPWEWHHEHGVAA---MKAGKIVG 119 (444)
T ss_dssp CCEEEECCCGGGHHHHHHHH---HHTTCEEE
T ss_pred CCEEEEcCCcHHHHHHHHHH---HHCCCeEE
Confidence 89999999988765555443 23455444
No 211
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.48 E-value=1e-06 Score=74.38 Aligned_cols=94 Identities=19% Similarity=0.251 Sum_probs=65.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH------cC--ceeecCchhhhccCCEEEEe
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES------IG--VKVLSDNNAVVEYSDVVVFS 78 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~----~l~~------~g--~~~~~~~~~~~~~aDivil~ 78 (272)
|||+|||+|.||++++..|...|+. .+|.+| |+++++++ ++.. .. +..+.+ .+++++||+||++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~--~~v~L~-D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV--DEIALV-DIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC--SEEEEE-CSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CeEEEE-ECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEEC
Confidence 7999999999999999999998863 379999 99998764 1221 12 223345 7789999999999
Q ss_pred eC----ccc------------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 79 VK----PQV------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 79 v~----~~~------------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
.. |.. ++++.+.+..+ .|+.+++-.++++.
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNPvd 122 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPMD 122 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcch
Confidence 72 211 22333455555 67778887766544
No 212
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.47 E-value=1.6e-06 Score=74.23 Aligned_cols=97 Identities=14% Similarity=0.196 Sum_probs=68.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---------cCceeecCchhhhccCCEEEEee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---------IGVKVLSDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~---------~g~~~~~~~~~~~~~aDivil~v 79 (272)
+.+||+|||+|.+|.+++..|...++. .+|.++ |+++++++.... ..+.+..+..+++++||+||++.
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~--~el~L~-Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~a 80 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIA--EEFVIV-DVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITA 80 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCC--CEEEEE-eCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECC
Confidence 448999999999999999999988763 489999 999887664222 13344445677799999999997
Q ss_pred Ccc----------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 80 KPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 80 ~~~----------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
+.. .+.++.+.+..+ .|+..++..++++.
T Consensus 81 g~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~ 125 (318)
T 1ez4_A 81 GAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPVD 125 (318)
T ss_dssp CC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcHH
Confidence 421 133444555555 57777776666544
No 213
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.46 E-value=3.6e-07 Score=80.39 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=70.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC-cccHH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~-~~~~~ 85 (272)
....++++|+|+|.+|..+++.+...|. +|.++ ++++.+.......|..+ .+.++++..+|+|++|.- ...+.
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga----~Viv~-D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~atgt~~lI~ 290 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS----IVYVT-EIDPICALQACMDGFRL-VKLNEVIRQVDIVITCTGNKNVVT 290 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCSCSBC
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-eCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEECCCCcccCC
Confidence 3456899999999999999999999998 99999 99987765555577665 467899999999999843 22232
Q ss_pred -HHHHHhchhcCCCCEEEEEcCC
Q 024121 86 -DVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 86 -~v~~~l~~~l~~~~~iis~~~~ 107 (272)
+.+.. ++++.+++++..+
T Consensus 291 ~e~l~~----MK~gailINvgrg 309 (435)
T 3gvp_A 291 REHLDR----MKNSCIVCNMGHS 309 (435)
T ss_dssp HHHHHH----SCTTEEEEECSST
T ss_pred HHHHHh----cCCCcEEEEecCC
Confidence 44443 5688888887544
No 214
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.46 E-value=1.1e-06 Score=76.40 Aligned_cols=86 Identities=17% Similarity=0.260 Sum_probs=63.2
Q ss_pred CCCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhcc--CCEEEEeeC
Q 024121 7 PAESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEY--SDVVVFSVK 80 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~-la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~--aDivil~v~ 80 (272)
|++.+||||||+|.||.. .+..+.+. ++ +|. ++ ++++++++ .+ .++.++.|.++++.+ .|+|++|+|
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~----~l~av~-d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 76 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGL----ELAGVS-SSDASKVH--ADWPAIPVVSDPQMLFNDPSIDLIVIPTP 76 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTE----EEEEEE-CSCHHHHH--TTCSSCCEESCHHHHHHCSSCCEEEECSC
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCc----EEEEEE-CCCHHHHH--hhCCCCceECCHHHHhcCCCCCEEEEeCC
Confidence 455689999999999997 67777665 44 665 67 99998765 23 467778899998875 899999999
Q ss_pred cccHHHHHHHhchhcCCCCEEE
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+....++..... ..|+-|+
T Consensus 77 ~~~H~~~~~~al---~aGkhV~ 95 (352)
T 3kux_A 77 NDTHFPLAQSAL---AAGKHVV 95 (352)
T ss_dssp TTTHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HCCCcEE
Confidence 887666554432 3455454
No 215
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.45 E-value=5e-07 Score=78.93 Aligned_cols=103 Identities=14% Similarity=0.279 Sum_probs=70.1
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEee
Q 024121 4 FPIPAESFILGFIGAGKMAESIAKGVAKS--GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~la~~l~~~--g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v 79 (272)
||......||+|||+| +|...+..+.+. ++ ++. ++ +|++++++++.+ .|+...+|.++++++.|++++|+
T Consensus 1 M~~~~~~~rv~VvG~G-~g~~h~~a~~~~~~~~----elvav~-~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~ 74 (372)
T 4gmf_A 1 MPSASPKQRVLIVGAK-FGEMYLNAFMQPPEGL----ELVGLL-AQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVV 74 (372)
T ss_dssp ------CEEEEEECST-TTHHHHHTTSSCCTTE----EEEEEE-CCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECC
T ss_pred CCCCCCCCEEEEEehH-HHHHHHHHHHhCCCCe----EEEEEE-CCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEEC
Confidence 4555567899999999 898777777654 34 665 56 999999988877 89988899999999999999999
Q ss_pred CcccH----HHHHHHhchhcCCCCEEEEEcCCCCHHHHHHH
Q 024121 80 KPQVV----KDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEW 116 (272)
Q Consensus 80 ~~~~~----~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~ 116 (272)
|.... .++..+. +..|+-|+. -++++.++.++.
T Consensus 75 p~~~h~~~~~~~a~~a---l~aGkhVl~-EKPl~~~ea~~l 111 (372)
T 4gmf_A 75 RSTVAGGAGTQLARHF---LARGVHVIQ-EHPLHPDDISSL 111 (372)
T ss_dssp C--CTTSHHHHHHHHH---HHTTCEEEE-ESCCCHHHHHHH
T ss_pred CCcccchhHHHHHHHH---HHcCCcEEE-ecCCCHHHHHHH
Confidence 87643 3343332 345665553 366776655444
No 216
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.44 E-value=1.1e-06 Score=74.83 Aligned_cols=94 Identities=20% Similarity=0.190 Sum_probs=64.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c-------C--ceeecCchhhhccCCEEEE
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I-------G--VKVLSDNNAVVEYSDVVVF 77 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~---~-------g--~~~~~~~~~~~~~aDivil 77 (272)
+|||+|||+|.||.+++..|...|+. +|.++ |+++++++.... . . +..+.+. +.+++||+||+
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~---~v~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~ 76 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELG---DIVLL-DIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVV 76 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCS---EEEEE-CSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC---eEEEE-eCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEE
Confidence 37999999999999999999998863 59999 998876643221 1 2 2233555 67899999999
Q ss_pred eeC-c---------------ccHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 78 SVK-P---------------QVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 78 ~v~-~---------------~~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
++. | ..+.++.+.+..+ .|+.+++-.++++.
T Consensus 77 a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~tNPv~ 123 (309)
T 1ur5_A 77 TSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVNNPLD 123 (309)
T ss_dssp CCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECCSSHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcCCchH
Confidence 972 1 1123455566665 47777765555443
No 217
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.43 E-value=1.6e-06 Score=73.63 Aligned_cols=96 Identities=16% Similarity=0.263 Sum_probs=66.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH---HHHHHH---cCceeecCchhhhccCCEEEEeeCc-
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKR---RDAFES---IGVKVLSDNNAVVEYSDVVVFSVKP- 81 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~---~~~l~~---~g~~~~~~~~~~~~~aDivil~v~~- 81 (272)
.++||+|||+|.||..++..++..|+. .+|.++ |++++. ..++.. ..+..+.+. +.+++||+||++...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~--~ev~L~-Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~ 88 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIA--DRLVLL-DLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSL 88 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCC--CEEEEE-cCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCC
Confidence 357999999999999999999988863 489999 998742 223322 235555666 668999999999711
Q ss_pred --------------ccHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 82 --------------QVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 82 --------------~~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
..+.+++.++..+. |+.+++..++++.
T Consensus 89 ~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 89 GSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVE 129 (303)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHH
Confidence 12456666777664 7778776767543
No 218
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.43 E-value=1.7e-06 Score=74.10 Aligned_cols=99 Identities=16% Similarity=0.271 Sum_probs=66.8
Q ss_pred CCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH------cCcee--ecCchhhhccC
Q 024121 5 PIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES------IGVKV--LSDNNAVVEYS 72 (272)
Q Consensus 5 ~~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~----~l~~------~g~~~--~~~~~~~~~~a 72 (272)
|-.|+.+||+|||+|.||.+++..|...|+ . +|.+| |+++++++ ++.. ....+ +.+. +++++|
T Consensus 2 ~~~m~~~kI~viGaG~vG~~~a~~l~~~~~-~--~v~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~a 76 (324)
T 3gvi_A 2 PGSMARNKIALIGSGMIGGTLAHLAGLKEL-G--DVVLF-DIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGA 76 (324)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHHHTTC-C--EEEEE-CSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTC
T ss_pred CCCCcCCEEEEECCCHHHHHHHHHHHhCCC-C--eEEEE-eCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCC
Confidence 334677899999999999999999999887 2 89999 99987653 2222 13333 3454 779999
Q ss_pred CEEEEeeC-c---c------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 73 DVVVFSVK-P---Q------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 73 Divil~v~-~---~------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
|+||++.. | . .++++.+.+..+ .|+.+++..+++..
T Consensus 77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvtNPvd 128 (324)
T 3gvi_A 77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICITNPLD 128 (324)
T ss_dssp SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEecCCCcH
Confidence 99999972 1 1 123344455555 47778777766544
No 219
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.43 E-value=7.7e-07 Score=67.18 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=69.5
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 10 SFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 10 ~~~IgiIG~----G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
..+|+|||+ |++|..++++|.+.|| +|+ +.++.. +.+ .|+.+..+..++....|++++++|++.+.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~----~v~---~Vnp~~-~~i--~G~~~y~sl~~l~~~vDlvvi~vp~~~~~ 91 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGY----DVY---PVNPKY-EEV--LGRKCYPSVLDIPDKIEVVDLFVKPKLTM 91 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTC----EEE---EECTTC-SEE--TTEECBSSGGGCSSCCSEEEECSCHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCC----EEE---EECCCC-CeE--CCeeccCCHHHcCCCCCEEEEEeCHHHHH
Confidence 468999999 7999999999999999 754 445543 111 58888888888888899999999999999
Q ss_pred HHHHHhchhcCCCCEEEEEcCCCCHHHHHHHh
Q 024121 86 DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~ 117 (272)
++++++... ....+|+ ..+...+.+.+..
T Consensus 92 ~vv~~~~~~-gi~~i~~--~~g~~~~~l~~~a 120 (144)
T 2d59_A 92 EYVEQAIKK-GAKVVWF--QYNTYNREASKKA 120 (144)
T ss_dssp HHHHHHHHH-TCSEEEE--CTTCCCHHHHHHH
T ss_pred HHHHHHHHc-CCCEEEE--CCCchHHHHHHHH
Confidence 999876653 2333433 3555555554444
No 220
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.43 E-value=1.4e-06 Score=76.07 Aligned_cols=96 Identities=18% Similarity=0.258 Sum_probs=66.0
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhc--cCCEEEEeeCc
Q 024121 8 AESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKP 81 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~-la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDivil~v~~ 81 (272)
++++||||||+|.||.. .+..+.+. ++ +|. ++ +++++++. .+ .++..+.|.+++++ +.|+|++|+|+
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~--~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSVPGL----NLAFVA-SRDEEKVK--RDLPDVTVIASPEAAVQHPDVDLVVIASPN 77 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTSTTE----EEEEEE-CSCHHHHH--HHCTTSEEESCHHHHHTCTTCSEEEECSCG
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhCCCe----EEEEEE-cCCHHHHH--hhCCCCcEECCHHHHhcCCCCCEEEEeCCh
Confidence 34579999999999997 56666654 44 665 67 99998765 23 46778889999887 78999999998
Q ss_pred ccHHHHHHHhchhcCCCCEEEEEcCC--CCHHHHH
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQ 114 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~~~~--~~~~~l~ 114 (272)
....++.... +..|+-|+. -++ .+.+..+
T Consensus 78 ~~H~~~~~~a---l~aGk~Vl~-EKPla~~~~e~~ 108 (364)
T 3e82_A 78 ATHAPLARLA---LNAGKHVVV-DKPFTLDMQEAR 108 (364)
T ss_dssp GGHHHHHHHH---HHTTCEEEE-CSCSCSSHHHHH
T ss_pred HHHHHHHHHH---HHCCCcEEE-eCCCcCCHHHHH
Confidence 8766655443 335555553 343 3444433
No 221
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.43 E-value=4.6e-07 Score=81.10 Aligned_cols=77 Identities=13% Similarity=0.212 Sum_probs=61.6
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHhC--CCCCCCcE-EEEeCCCHHHHHHHHH-cCce---eecCchhhhc--cCCEE
Q 024121 9 ESFILGFIGA----GKMAESIAKGVAKS--GVLPPDRI-CTAVHSNLKRRDAFES-IGVK---VLSDNNAVVE--YSDVV 75 (272)
Q Consensus 9 ~~~~IgiIG~----G~mG~~la~~l~~~--g~~~~~~V-~v~~~r~~~~~~~l~~-~g~~---~~~~~~~~~~--~aDiv 75 (272)
+.+||||||+ |.||...+..|.+. ++ +| .++ ++++++++.+.+ .|+. .+.+.+++++ +.|+|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~----~lvav~-d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V 93 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQF----QITALY-SPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMI 93 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTE----EEEEEE-CSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEE
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCe----EEEEEE-eCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEE
Confidence 3479999999 99999999999886 55 65 477 999999888776 5654 7788888886 68999
Q ss_pred EEeeCcccHHHHHHH
Q 024121 76 VFSVKPQVVKDVAMQ 90 (272)
Q Consensus 76 il~v~~~~~~~v~~~ 90 (272)
++|+|+....+++..
T Consensus 94 ~i~tp~~~H~~~~~~ 108 (438)
T 3btv_A 94 VIAIQVASHYEVVMP 108 (438)
T ss_dssp EECSCHHHHHHHHHH
T ss_pred EEeCCcHHHHHHHHH
Confidence 999998765555544
No 222
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.41 E-value=3.7e-07 Score=79.08 Aligned_cols=96 Identities=17% Similarity=0.141 Sum_probs=65.4
Q ss_pred CCeEEEEcccHHHHHHHHH-HHhC--CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeecCchhhhcc--CCEEEEeeCcc
Q 024121 10 SFILGFIGAGKMAESIAKG-VAKS--GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEY--SDVVVFSVKPQ 82 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~-l~~~--g~~~~~~V~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~--aDivil~v~~~ 82 (272)
++||||||+|.||..+... ++.. ++ +|. ++ +|++++.+...+ .++..+.|.++++.+ .|+|++|+|+.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~----~l~av~-d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 76 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSW----HVAHIF-RRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHAD 76 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTE----EEEEEE-CSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGG
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCe----EEEEEE-cCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChH
Confidence 4799999999999964444 4332 44 665 67 999877654444 477888899998875 89999999988
Q ss_pred cHHHHHHHhchhcCCCCEEEEEcCC--CCHHHHH
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQ 114 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~~~--~~~~~l~ 114 (272)
...++.... +..|+.|+. -++ .+.+..+
T Consensus 77 ~h~~~~~~a---l~aGk~Vl~-EKP~a~~~~e~~ 106 (345)
T 3f4l_A 77 SHFEYAKRA---LEAGKNVLV-EKPFTPTLAQAK 106 (345)
T ss_dssp GHHHHHHHH---HHTTCEEEE-CSSSCSSHHHHH
T ss_pred HHHHHHHHH---HHcCCcEEE-eCCCCCCHHHHH
Confidence 766655443 345665553 243 3444433
No 223
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.41 E-value=8.5e-07 Score=79.28 Aligned_cols=113 Identities=12% Similarity=0.246 Sum_probs=76.5
Q ss_pred CCeEEEEcccHH-HHHHHHHHHhC--CCCCCCcEEEEeCCCH--HHHHHHH--------Hc--C--ceeecCchhhhccC
Q 024121 10 SFILGFIGAGKM-AESIAKGVAKS--GVLPPDRICTAVHSNL--KRRDAFE--------SI--G--VKVLSDNNAVVEYS 72 (272)
Q Consensus 10 ~~~IgiIG~G~m-G~~la~~l~~~--g~~~~~~V~v~~~r~~--~~~~~l~--------~~--g--~~~~~~~~~~~~~a 72 (272)
.+||+|||+|.+ |.+++..|.+. +. +..+|.+| |+++ ++++... .. . +..+.|..+++++|
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l-~~~ev~L~-Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gA 84 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHEL-PVGELWLV-DIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGA 84 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTC-CEEEEEEE-CCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCC-CCCEEEEE-EcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCC
Confidence 479999999999 88888888873 22 23389999 9999 7755421 11 2 23345666889999
Q ss_pred CEEEEeeCccc------------------------------------HHHHHHHhchhcCCCCEEEEEcCCCCH--HHHH
Q 024121 73 DVVVFSVKPQV------------------------------------VKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQ 114 (272)
Q Consensus 73 Divil~v~~~~------------------------------------~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~ 114 (272)
|+||++++... +.++++.+..+ .|+..++..++++.. ..+.
T Consensus 85 D~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~-~P~a~ii~~tNPvdivT~a~~ 163 (450)
T 1s6y_A 85 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL-CPDAWLINFTNPAGMVTEAVL 163 (450)
T ss_dssp SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHHHHHHHH
T ss_pred CEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHH
Confidence 99999997532 34555556555 588888888777654 3344
Q ss_pred HHhCCCCEEEE
Q 024121 115 EWTGHSRFIRV 125 (272)
Q Consensus 115 ~~~~~~~~~~~ 125 (272)
+..+..++++.
T Consensus 164 k~~p~~rViG~ 174 (450)
T 1s6y_A 164 RYTKQEKVVGL 174 (450)
T ss_dssp HHCCCCCEEEC
T ss_pred HhCCCCCEEEe
Confidence 44454467664
No 224
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.41 E-value=2.2e-06 Score=73.04 Aligned_cols=95 Identities=19% Similarity=0.230 Sum_probs=66.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeecCchhhhccCCEEEEeeC-
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEYSDVVVFSVK- 80 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~aDivil~v~- 80 (272)
|||+|||+|.+|.+++..|...+. ..+|.++ |+++++++.... . .+.+..+..+++++||+||++.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~--~~el~L~-Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~ 77 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGV--AREVVLV-DLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGV 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--CSEEEEE-CSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCEEEEE-eCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCC
Confidence 699999999999999999998874 2489999 999887664222 1 23443345677999999999873
Q ss_pred ccc---------------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 81 PQV---------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 81 ~~~---------------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
+.. ++++.+.+..+ .|+..++..++++.
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~ 120 (310)
T 2xxj_A 78 AQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPVD 120 (310)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCchH
Confidence 211 33444555555 57777776666544
No 225
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.40 E-value=2.2e-06 Score=73.07 Aligned_cols=95 Identities=20% Similarity=0.269 Sum_probs=65.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH------cCceee-cCchhhhccCCEEEEee
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES------IGVKVL-SDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~----~l~~------~g~~~~-~~~~~~~~~aDivil~v 79 (272)
|||+|||+|.||++++..|...|+. .+|.++ |+++++++ ++.. ....+. .+..+.+++||+||++.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~--~el~l~-D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~a 77 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA--KEVVMV-DIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITA 77 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS--SEEEEE-CSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECC
Confidence 7999999999999999999988862 389999 99987654 2222 134443 35567789999999997
Q ss_pred Ccc----------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 80 KPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 80 ~~~----------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
... .++++.+.+..+ .|+.+++..+++..
T Consensus 78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvd 122 (314)
T 3nep_X 78 GLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPLD 122 (314)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSHH
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCchh
Confidence 311 122333445554 57777777766544
No 226
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.38 E-value=3.5e-06 Score=72.08 Aligned_cols=96 Identities=14% Similarity=0.037 Sum_probs=68.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHH----HH---c----CceeecCchhhhccCCEEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAF----ES---I----GVKVLSDNNAVVEYSDVVVF 77 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l----~~---~----g~~~~~~~~~~~~~aDivil 77 (272)
..+||+|||+|.||++++..+...|+. .+|.++ |+++++++.. .. . .+....+.++ +++||+||+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~--~ev~L~-Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIi 95 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLA--DEVALV-DVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVI 95 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCC--SEEEEE-CSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--CeEEEE-ECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEE
Confidence 458999999999999999999998863 389999 9998766532 21 0 1233456655 899999999
Q ss_pred ee--Cc-------c-------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 78 SV--KP-------Q-------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 78 ~v--~~-------~-------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
+. |. + .++++.+++..+ .|+.+++..+++..
T Consensus 96 taG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPvd 142 (330)
T 3ldh_A 96 TAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELGT 142 (330)
T ss_dssp CCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred eCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCccH
Confidence 86 21 1 134555666666 68888887777544
No 227
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.38 E-value=1.7e-06 Score=74.10 Aligned_cols=97 Identities=15% Similarity=0.240 Sum_probs=66.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH------cCceee-cCchhhhccCCEEE
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES------IGVKVL-SDNNAVVEYSDVVV 76 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~----~l~~------~g~~~~-~~~~~~~~~aDivi 76 (272)
|.++||+|||+|.||++++..|...|+ . +|.++ |+++++++ ++.. ....+. .+..+++++||+||
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~-~--~v~l~-Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVI 78 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQL-G--DVVLF-DIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVI 78 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-C--EEEEE-CSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-c--eEEEE-eCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEE
Confidence 456899999999999999999999886 2 89999 99987754 2222 123332 23357789999999
Q ss_pred EeeC----cc------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 77 FSVK----PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 77 l~v~----~~------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
++.. |. .++++.+.+..+ .|+.+++..++++.
T Consensus 79 i~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvd 126 (321)
T 3p7m_A 79 VTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN-CPNAFVICITNPLD 126 (321)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred EcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH-CCCcEEEEecCchH
Confidence 9962 11 123444555555 47777776655543
No 228
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.37 E-value=1.4e-07 Score=78.97 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=65.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC-ceeecCchhhhccCCEEEEeeCcccHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG-VKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g-~~~~~~~~~~~~~aDivil~v~~~~~~~ 86 (272)
...+++.|||+|.||.+++..|.+.|. .+|+++ +|++++++++.+.. .....+..+.+.++|+||-|+|......
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~---~~v~v~-~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~ 190 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVR---PTLTVA-NRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGN 190 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCC---SCCEEE-CSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC------
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC---CEEEEE-eCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCC
Confidence 346789999999999999999999986 379999 99999887765421 1122345566789999999998643222
Q ss_pred HHHHh-chhcCCCCEEEEEcC
Q 024121 87 VAMQI-RPLLSRKKLLVSVAA 106 (272)
Q Consensus 87 v~~~l-~~~l~~~~~iis~~~ 106 (272)
+-..+ ...++++.+++|++.
T Consensus 191 ~~~~l~~~~l~~~~~V~D~vY 211 (277)
T 3don_A 191 TDSVISLNRLASHTLVSDIVY 211 (277)
T ss_dssp -CCSSCCTTCCSSCEEEESCC
T ss_pred CcCCCCHHHcCCCCEEEEecC
Confidence 10001 234678888888753
No 229
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.36 E-value=2.9e-06 Score=73.78 Aligned_cols=84 Identities=12% Similarity=0.168 Sum_probs=61.0
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHc-CceeecCchhhhc--cCCEEEEeeCcc
Q 024121 9 ESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESI-GVKVLSDNNAVVE--YSDVVVFSVKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~-la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~~-g~~~~~~~~~~~~--~aDivil~v~~~ 82 (272)
+++||||||+|.||.. .+..+.+. ++ +|. ++ ++++++.. .+. ++..+.|.+++++ +.|+|++|+|+.
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEY----QISKIM-TSRTEEVK--RDFPDAEVVHELEEITNDPAIELVIVTTPSG 76 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTE----EEEEEE-CSCHHHHH--HHCTTSEEESSTHHHHTCTTCCEEEECSCTT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCe----EEEEEE-cCCHHHHH--hhCCCCceECCHHHHhcCCCCCEEEEcCCcH
Confidence 4579999999999997 56666554 44 664 66 99987632 233 6788889999887 689999999988
Q ss_pred cHHHHHHHhchhcCCCCEEE
Q 024121 83 VVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~ii 102 (272)
...++..... ..|+-|+
T Consensus 77 ~H~~~~~~al---~aGkhVl 93 (358)
T 3gdo_A 77 LHYEHTMACI---QAGKHVV 93 (358)
T ss_dssp THHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HcCCeEE
Confidence 7666654433 3455555
No 230
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.36 E-value=4.7e-06 Score=71.31 Aligned_cols=97 Identities=19% Similarity=0.250 Sum_probs=68.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH-----cCceeecCchhhhccCCEEEEee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES-----IGVKVLSDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~----l~~-----~g~~~~~~~~~~~~~aDivil~v 79 (272)
..+||+|||+|.||++++..|...|+. .++.++ |+++++++. +.. .++.+..+..+.+++||+||++.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~--~el~l~-D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~a 84 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA--QEIGIV-DIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITA 84 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--CeEEEE-eCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECC
Confidence 457999999999999999999998863 389999 999887653 222 13455555567799999999986
Q ss_pred C-cc---------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 80 K-PQ---------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 80 ~-~~---------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
. |+ .++++.+.+..+ .|+.+++..+++..
T Consensus 85 g~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtNPvd 129 (326)
T 3vku_A 85 GAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPVD 129 (326)
T ss_dssp CCC----------------CHHHHHHHHHTT-TCCSEEEECSSSHH
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEccCchH
Confidence 2 11 123444455554 46777776666543
No 231
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.35 E-value=7.6e-07 Score=77.72 Aligned_cols=88 Identities=16% Similarity=0.173 Sum_probs=64.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC--cee-ec---CchhhhccCCEEEEeeCcc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG--VKV-LS---DNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g--~~~-~~---~~~~~~~~aDivil~v~~~ 82 (272)
..|||.|||+|.+|+.++..|.+ .+ +|.++ +|+.++++++.+.. +.+ .. +..++++++|+||.|+|+.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~----~v~~~-~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EF----DVYIG-DVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TS----EEEEE-ESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CC----CeEEE-EcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 35899999999999999998866 46 89999 99999888876532 111 11 2345678999999999998
Q ss_pred cHHHHHHHhchhcCCCCEEEEEc
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~ 105 (272)
.-..++... +..++-++|++
T Consensus 89 ~~~~v~~~~---~~~g~~yvD~s 108 (365)
T 3abi_A 89 LGFKSIKAA---IKSKVDMVDVS 108 (365)
T ss_dssp GHHHHHHHH---HHHTCEEEECC
T ss_pred ccchHHHHH---HhcCcceEeee
Confidence 666665443 34566777764
No 232
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.34 E-value=2.2e-06 Score=75.06 Aligned_cols=92 Identities=13% Similarity=0.163 Sum_probs=64.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCC---C-CCcE-EEEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCCEEEE
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVL---P-PDRI-CTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVF 77 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~---~-~~~V-~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDivil 77 (272)
.|+..||||||+|.||...+..+.+...+ . ..+| .++ ++++++++.+.+ .|+ .+..|.+++++ +.|+|++
T Consensus 3 ~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~-d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I 81 (390)
T 4h3v_A 3 AMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLC-GRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDV 81 (390)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEE-CSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEE
T ss_pred CCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEE-cCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEE
Confidence 34556899999999999888777653210 0 0144 466 999999988876 675 56788888886 4899999
Q ss_pred eeCcccHHHHHHHhchhcCCCCEEE
Q 024121 78 SVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 78 ~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
|+|+....++..... ..|+-|+
T Consensus 82 ~tP~~~H~~~~~~al---~aGkhVl 103 (390)
T 4h3v_A 82 CTPGDSHAEIAIAAL---EAGKHVL 103 (390)
T ss_dssp CSCGGGHHHHHHHHH---HTTCEEE
T ss_pred eCChHHHHHHHHHHH---HcCCCce
Confidence 999887665554432 3455444
No 233
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.33 E-value=1.1e-06 Score=77.09 Aligned_cols=93 Identities=17% Similarity=0.242 Sum_probs=67.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCcee------ecCchhhhccCCEEEEeeC
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKV------LSDNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~------~~~~~~~~~~aDivil~v~ 80 (272)
...++|+|||+|.+|..+++.+...|. +|+++ +|++++.+.+.+ .|..+ ..+..+.+.++|+||.|++
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga----~V~~~-d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~ 240 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA----TVTVL-DINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL 240 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC
Confidence 346799999999999999999999998 99999 999998877766 55432 1234566789999999884
Q ss_pred -ccc-HHHH-HHHhchhcCCCCEEEEEc
Q 024121 81 -PQV-VKDV-AMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 81 -~~~-~~~v-~~~l~~~l~~~~~iis~~ 105 (272)
+.. ...+ ..+..+.++++.++|++.
T Consensus 241 ~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred cCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 221 1111 122334467888888774
No 234
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.33 E-value=3.4e-06 Score=73.93 Aligned_cols=91 Identities=22% Similarity=0.238 Sum_probs=61.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCC----CCCCCcEE-EEeCCCHHHHHHHHH-cCc-eeecCchhhhc--cCCEEEEe
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSG----VLPPDRIC-TAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFS 78 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g----~~~~~~V~-v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDivil~ 78 (272)
|+..||||||+|.||..-+..+.+.. ..+..+|. ++ |+++++++++.+ .|+ .++.|.+++++ +.|+|++|
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~-d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Ia 101 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLA-EANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVT 101 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEE-CC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEEC
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEE-CCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEEC
Confidence 35568999999999997776664321 00112554 66 999999988877 676 57788888876 57999999
Q ss_pred eCcccHHHHHHHhchhcCCCCEEE
Q 024121 79 VKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 79 v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+|+....++..... ..|+-|+
T Consensus 102 tP~~~H~~~a~~al---~aGkhVl 122 (393)
T 4fb5_A 102 TPNQFHAEMAIAAL---EAGKHVW 122 (393)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CChHHHHHHHHHHH---hcCCeEE
Confidence 99887665554433 3455544
No 235
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.32 E-value=6.1e-07 Score=74.86 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=69.0
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHH-----HHHHH--cCceeecCchhhhccCCEEEE
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRR-----DAFES--IGVKVLSDNNAVVEYSDVVVF 77 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~-----~~l~~--~g~~~~~~~~~~~~~aDivil 77 (272)
|+++||+|+| +|+||+.+++.+.+. ++ ++. ++ +|+.... ..+.. .|+.+..+.++++.++|+||-
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~----eLv~~~-d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVID 79 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDA----TLVGAL-DRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLID 79 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTE----EEEEEB-CCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCC----EEEEEE-EecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEE
Confidence 5678999999 899999999998865 33 555 45 8764321 11111 256677888888889999999
Q ss_pred eeCcccHHHHHHHhchhcCCCCEEEEEcCCCCHHHHH
Q 024121 78 SVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQ 114 (272)
Q Consensus 78 ~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~ 114 (272)
+++|+...+.+.... ..+.-+|..+.|.+.+.++
T Consensus 80 fT~p~a~~~~~~~al---~~G~~vVigTTG~s~~~~~ 113 (272)
T 4f3y_A 80 FTLPEGTLVHLDAAL---RHDVKLVIGTTGFSEPQKA 113 (272)
T ss_dssp CSCHHHHHHHHHHHH---HHTCEEEECCCCCCHHHHH
T ss_pred cCCHHHHHHHHHHHH---HcCCCEEEECCCCCHHHHH
Confidence 999888777666544 3455566556778776543
No 236
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.31 E-value=1.6e-06 Score=73.16 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=69.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHHcCceeecCchhhhc--cCCEEEEeeCcccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDivil~v~~~~~ 84 (272)
+.+||+|+|+ |+||...++++.+.|+ ++. .. |+.... + ...|+.+..+.+++.+ +.|++++++|+...
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~----~~V~~V-~p~~~g-~--~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~ 77 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGT----KMVGGV-TPGKGG-T--THLGLPVFNTVREAVAATGATASVIYVPAPFC 77 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC----EEEEEE-CTTCTT-C--EETTEEEESSHHHHHHHHCCCEEEECCCGGGH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC----eEEEEe-CCCccc-c--eeCCeeccCCHHHHhhcCCCCEEEEecCHHHH
Confidence 4579999998 9999999999999888 633 44 543210 1 1268888888888887 89999999999998
Q ss_pred HHHHHHhchhcCCCCEEEEEcCCCCHHH
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKD 112 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~~~~~~ 112 (272)
.+++.+.... .-+.+|..+.|++.++
T Consensus 78 ~~~~~ea~~~--Gi~~iVi~t~G~~~~~ 103 (288)
T 2nu8_A 78 KDSILEAIDA--GIKLIITITEGIPTLD 103 (288)
T ss_dssp HHHHHHHHHT--TCSEEEECCCCCCHHH
T ss_pred HHHHHHHHHC--CCCEEEEECCCCCHHH
Confidence 8888776542 1234455667887754
No 237
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.30 E-value=8.6e-07 Score=78.30 Aligned_cols=87 Identities=15% Similarity=0.234 Sum_probs=66.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeec--------------------------
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLS-------------------------- 63 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~-------------------------- 63 (272)
..+|+|||+|.+|...++.+...|. +|+++ ||++++.+.+.+.|.....
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga----~V~v~-D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 246 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGA----IVRAF-DTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEM 246 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHH
Confidence 5789999999999999999999998 99999 9999988877777765431
Q ss_pred -CchhhhccCCEEEEe--eCc----ccH-HHHHHHhchhcCCCCEEEEEc
Q 024121 64 -DNNAVVEYSDVVVFS--VKP----QVV-KDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 64 -~~~~~~~~aDivil~--v~~----~~~-~~v~~~l~~~l~~~~~iis~~ 105 (272)
+..+.+..+|+||.| +|. ..+ ++.+. .++++.+||++.
T Consensus 247 ~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~----~mk~g~vIVdva 292 (401)
T 1x13_A 247 ELFAAQAKEVDIIVTTALIPGKPAPKLITREMVD----SMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHH----TSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHh----cCCCCcEEEEEc
Confidence 244667789999999 442 112 33443 356888999874
No 238
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.30 E-value=1e-06 Score=74.03 Aligned_cols=92 Identities=15% Similarity=0.232 Sum_probs=65.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC----ceeecCchhhhccCCEEEEeeCcc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG----VKVLSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g----~~~~~~~~~~~~~aDivil~v~~~ 82 (272)
...+++.|+|+|.+|.+++..|.+.|. .+|+++ +|++++++++.+ .+ +... +.+++..++|+||-|+|..
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~---~~v~v~-~R~~~~a~~la~~~~~~~~~~~~-~~~~l~~~aDiIInaTp~g 198 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQP---ASITVT-NRTFAKAEQLAELVAAYGEVKAQ-AFEQLKQSYDVIINSTSAS 198 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCC---SEEEEE-ESSHHHHHHHHHHHGGGSCEEEE-EGGGCCSCEEEEEECSCCC
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCC---CeEEEE-ECCHHHHHHHHHHhhccCCeeEe-eHHHhcCCCCEEEEcCcCC
Confidence 456899999999999999999999994 289999 999999888776 22 3332 4455557899999999865
Q ss_pred cHHHHHHHh-chhcCCCCEEEEEc
Q 024121 83 VVKDVAMQI-RPLLSRKKLLVSVA 105 (272)
Q Consensus 83 ~~~~v~~~l-~~~l~~~~~iis~~ 105 (272)
...+. ..+ ...++++.+++|+.
T Consensus 199 m~~~~-~~l~~~~l~~~~~V~Dlv 221 (281)
T 3o8q_A 199 LDGEL-PAIDPVIFSSRSVCYDMM 221 (281)
T ss_dssp C-----CSCCGGGEEEEEEEEESC
T ss_pred CCCCC-CCCCHHHhCcCCEEEEec
Confidence 43221 011 12356777788775
No 239
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.29 E-value=7.1e-07 Score=74.73 Aligned_cols=91 Identities=10% Similarity=0.175 Sum_probs=60.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c----CceeecCchhhhc-cCCEEEEeeCc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I----GVKVLSDNNAVVE-YSDVVVFSVKP 81 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~----g~~~~~~~~~~~~-~aDivil~v~~ 81 (272)
...+++.|+|+|.||.+++..|.+.|. +|++| +|++++++++.+ . .+.. .+.+++.+ ++|+||.|+|.
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G~----~v~v~-~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivIn~t~~ 190 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQQ----NIVLA-NRTFSKTKELAERFQPYGNIQA-VSMDSIPLQTYDLVINATSA 190 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTC----EEEEE-ESSHHHHHHHHHHHGGGSCEEE-EEGGGCCCSCCSEEEECCCC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHHccccCCeEE-eeHHHhccCCCCEEEECCCC
Confidence 356799999999999999999999998 99999 999999888865 2 2222 23334334 89999999986
Q ss_pred ccHHHHHHHhc-hhcCCCCEEEEEc
Q 024121 82 QVVKDVAMQIR-PLLSRKKLLVSVA 105 (272)
Q Consensus 82 ~~~~~v~~~l~-~~l~~~~~iis~~ 105 (272)
.....+. .+. ..++++.+++++.
T Consensus 191 ~~~~~~~-~i~~~~l~~~~~v~D~~ 214 (272)
T 1p77_A 191 GLSGGTA-SVDAEILKLGSAFYDMQ 214 (272)
T ss_dssp --------CCCHHHHHHCSCEEESC
T ss_pred CCCCCCC-CCCHHHcCCCCEEEEee
Confidence 5432221 111 1134556666653
No 240
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.28 E-value=1.5e-06 Score=72.24 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=65.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH-HHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK-DVA 88 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~-~v~ 88 (272)
.+++.|||+|.+|.+++..|.+.|. +|+++ +|++++++.+.+.++... +.+++ .++|+||-|+|..... ..+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~----~v~V~-nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l 190 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL----QVSVL-NRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPL 190 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCC
Confidence 5789999999999999999999997 99999 999999988876666543 33443 4899999999754210 011
Q ss_pred --HHhchhcCCCCEEEEEcC
Q 024121 89 --MQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 89 --~~l~~~l~~~~~iis~~~ 106 (272)
+.+...++++.+++|+.-
T Consensus 191 ~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 191 NKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp CHHHHHHHHHHCSEEEESCC
T ss_pred ChHHHHhhCCCCCEEEEeCC
Confidence 111223457788888753
No 241
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=98.28 E-value=6.6e-06 Score=72.86 Aligned_cols=90 Identities=11% Similarity=0.198 Sum_probs=65.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cCc--hh----h-hccCCEEEEeeC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN--NA----V-VEYSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~~--~~----~-~~~aDivil~v~ 80 (272)
..++|.|+|+|.+|..+++.|.+.|+ +|++. ++++++++.+.+.|+.+. .|. .+ + +.++|+||++++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~----~vvvI-d~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGV----KMVVL-DHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC----CEEEE-ECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC----CEEEE-ECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 45789999999999999999999999 99999 999999999888776532 221 12 2 568999999998
Q ss_pred cccHHHHHHHhchhcCCCCEEEE
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVS 103 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis 103 (272)
++.....+-.....+.|+..||.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ChHHHHHHHHHHHHhCCCCeEEE
Confidence 76544333333333456644443
No 242
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.28 E-value=2.4e-06 Score=74.42 Aligned_cols=85 Identities=13% Similarity=0.094 Sum_probs=61.3
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHc-CceeecCchhhhcc--CCEEEEeeCc
Q 024121 8 AESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESI-GVKVLSDNNAVVEY--SDVVVFSVKP 81 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~-la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~--aDivil~v~~ 81 (272)
|+++||||||+|.||.. .+..+.+. ++ +|. ++ +++++++. .+. ++..+.|.++++++ .|+|++|+|+
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 75 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHF----ELYKIV-ERSKELSK--ERYPQASIVRSFKELTEDPEIDLIVVNTPD 75 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTE----EEEEEE-CSSCCGGG--TTCTTSEEESCSHHHHTCTTCCEEEECSCG
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCe----EEEEEE-cCCHHHHH--HhCCCCceECCHHHHhcCCCCCEEEEeCCh
Confidence 35679999999999997 66666664 44 665 66 99987632 224 67788899999876 8999999998
Q ss_pred ccHHHHHHHhchhcCCCCEEE
Q 024121 82 QVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~ii 102 (272)
....++..... ..|+-|+
T Consensus 76 ~~H~~~~~~al---~aGkhVl 93 (362)
T 3fhl_A 76 NTHYEYAGMAL---EAGKNVV 93 (362)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HCCCeEE
Confidence 87666554433 3455444
No 243
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.26 E-value=6.4e-06 Score=70.23 Aligned_cols=96 Identities=19% Similarity=0.235 Sum_probs=63.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC--HHHHHHH----HH------cCceee-cCchhhhccCCEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN--LKRRDAF----ES------IGVKVL-SDNNAVVEYSDVV 75 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~--~~~~~~l----~~------~g~~~~-~~~~~~~~~aDiv 75 (272)
+.+||+|||+|.||++++..+...|+ .+|.++ |++ +++.+.. .. ....+. .+..+.+++||+|
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~---~~v~l~-D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvV 82 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKEL---ADVVLV-DIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVV 82 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---CEEEEE-CCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---CeEEEE-eccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEE
Confidence 45799999999999999999999886 389999 999 4443321 11 122232 2335668999999
Q ss_pred EEee--C--cc------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 76 VFSV--K--PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 76 il~v--~--~~------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
|++. | |. .++++.+.+..+ .|+.+++..+++..
T Consensus 83 Iiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNPvd 131 (315)
T 3tl2_A 83 VITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNPVD 131 (315)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCChHH
Confidence 9997 2 21 123444455555 57777777766543
No 244
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.26 E-value=5.6e-06 Score=70.45 Aligned_cols=92 Identities=16% Similarity=0.266 Sum_probs=65.1
Q ss_pred eEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH----H------cCcee--ecCchhhhccCCEEEEee
Q 024121 12 ILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE----S------IGVKV--LSDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 12 ~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~----~------~g~~~--~~~~~~~~~~aDivil~v 79 (272)
||+|||+|.||.+++..+...|+ .+|.++ |+++++++... . ....+ +.+. +++++||+||++.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l---~el~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY---DDLLLI-ARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTA 75 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC---SCEEEE-CSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEECcCHHHHHHHHHHHhCCC---CEEEEE-cCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeC
Confidence 69999999999999999988876 369999 99987664321 1 13333 3454 6789999999996
Q ss_pred Cccc----------------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 80 KPQV----------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 80 ~~~~----------------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
+... ++++++++..+ .|+..++..++++.
T Consensus 76 g~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~ 120 (308)
T 2d4a_B 76 GIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIVVITTNPVD 120 (308)
T ss_dssp SCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCchH
Confidence 4222 55666677666 47776666666443
No 245
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.25 E-value=4.3e-07 Score=73.08 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=53.3
Q ss_pred CCeEEEEcccHHHHHHHHH--HHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce--eecCchhhhccCCEEEEeeCcccHH
Q 024121 10 SFILGFIGAGKMAESIAKG--VAKSGVLPPDRICTAVHSNLKRRDAFESIGVK--VLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~--l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~--~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
.++|+|||+|++|.++++. +...|+ ++..+.|+++++..... .|+. ..++..+++++.|++++|+|.....
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~----~iVg~~D~dp~k~g~~i-~gv~V~~~~dl~eli~~~D~ViIAvPs~~~~ 159 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNT----KISMAFDINESKIGTEV-GGVPVYNLDDLEQHVKDESVAILTVPAVAAQ 159 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------C----CEEEEEESCTTTTTCEE-TTEEEEEGGGHHHHCSSCCEEEECSCHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCc----EEEEEEeCCHHHHHhHh-cCCeeechhhHHHHHHhCCEEEEecCchhHH
Confidence 4689999999999999994 334566 66543399987654322 2333 3456677776669999999988877
Q ss_pred HHHHHhch
Q 024121 86 DVAMQIRP 93 (272)
Q Consensus 86 ~v~~~l~~ 93 (272)
++.+.+..
T Consensus 160 ei~~~l~~ 167 (215)
T 2vt3_A 160 SITDRLVA 167 (215)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877654
No 246
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.25 E-value=3.1e-06 Score=72.14 Aligned_cols=91 Identities=12% Similarity=0.157 Sum_probs=61.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHh-C-CCCCCCcEE-EEeCCCHHH-HHHHH-HcCcee-ecCchhhh-----ccCCEEE
Q 024121 8 AESFILGFIGAGKMAESIAKGVAK-S-GVLPPDRIC-TAVHSNLKR-RDAFE-SIGVKV-LSDNNAVV-----EYSDVVV 76 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~-~-g~~~~~~V~-v~~~r~~~~-~~~l~-~~g~~~-~~~~~~~~-----~~aDivi 76 (272)
++.+||+|||+|.+|..+++.+.+ . +. ++. ++ ++++++ ..++. +.|+.. ..+.++++ .+.|+||
T Consensus 2 ~~~irVaIIG~G~iG~~~~~~l~~~~~~~----elvav~-d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~ 76 (312)
T 1nvm_B 2 NQKLKVAIIGSGNIGTDLMIKVLRNAKYL----EMGAMV-GIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVF 76 (312)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHCSSE----EEEEEE-CSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEE
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHhhCcCe----EEEEEE-eCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEE
Confidence 356799999999999999998865 2 33 444 56 999877 45544 367653 34445554 3589999
Q ss_pred EeeCcccHHHHHHHhchhcCCCCEEEEE
Q 024121 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 77 l~v~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
+|+|++...+........ ++|+.|++.
T Consensus 77 ~atp~~~h~~~a~~al~a-~~Gk~Vi~e 103 (312)
T 1nvm_B 77 DATSASAHVQNEALLRQA-KPGIRLIDL 103 (312)
T ss_dssp ECSCHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred ECCChHHHHHHHHHHHHh-CCCCEEEEc
Confidence 999977666655544322 237777764
No 247
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.23 E-value=7.2e-06 Score=70.66 Aligned_cols=69 Identities=16% Similarity=0.195 Sum_probs=53.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH-----cCceeecCchhhhccCCEEEE
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES-----IGVKVLSDNNAVVEYSDVVVF 77 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~----l~~-----~g~~~~~~~~~~~~~aDivil 77 (272)
|.++||+|||+ |.+|++++..+...|.. .+|.++ |+++++++. +.. ..+....+..+++++||+||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~--~evvLi-Di~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvi 82 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLT--PNLCLY-DPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVS 82 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCC--SCEEEE-CSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCC--CEEEEE-eCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEE
Confidence 35689999998 99999999999988842 289999 999876653 333 134445666778999999999
Q ss_pred ee
Q 024121 78 SV 79 (272)
Q Consensus 78 ~v 79 (272)
+.
T Consensus 83 ta 84 (343)
T 3fi9_A 83 SG 84 (343)
T ss_dssp CC
T ss_pred cc
Confidence 96
No 248
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.23 E-value=2.8e-06 Score=73.11 Aligned_cols=94 Identities=19% Similarity=0.285 Sum_probs=65.9
Q ss_pred CCCCCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHcCceeecCchhhhcc---CCEEEEeeC
Q 024121 7 PAESFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVEY---SDVVVFSVK 80 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~-~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~---aDivil~v~ 80 (272)
+|+.+||||||+|.||. ..+..+.+. +. +|. ++ +|++++ .|+....|.++++++ .|+|++|+|
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~----~lvav~-d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANF----KLVATA-SRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTE----EEEEEE-CSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSC
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCe----EEEEEE-eCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCC
Confidence 45668999999999998 688888875 34 654 56 998653 578888898888765 899999999
Q ss_pred cccHHHHHHHhchhcCCCCEEEEEcCC--CCHHHHHH
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQE 115 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis~~~~--~~~~~l~~ 115 (272)
+....++..... ..|+-|+ +-++ .+.++.++
T Consensus 91 ~~~H~~~~~~al---~aGkhVl-~EKP~a~~~~e~~~ 123 (330)
T 4ew6_A 91 PQYRYEAAYKAL---VAGKHVF-LEKPPGATLSEVAD 123 (330)
T ss_dssp HHHHHHHHHHHH---HTTCEEE-ECSSSCSSHHHHHH
T ss_pred cHHHHHHHHHHH---HcCCcEE-EeCCCCCCHHHHHH
Confidence 877666554433 3455555 2343 34444433
No 249
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.23 E-value=3.1e-06 Score=70.74 Aligned_cols=91 Identities=10% Similarity=0.182 Sum_probs=63.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC----ceeecCchhhh-ccCCEEEEeeCc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG----VKVLSDNNAVV-EYSDVVVFSVKP 81 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g----~~~~~~~~~~~-~~aDivil~v~~ 81 (272)
...+++.|+|+|.||.+++..|.+.|. +|+++ +|++++++.+.+ .+ +.. .+..++. .++|+||.|++.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~----~V~v~-~R~~~~~~~la~~~~~~~~~~~-~~~~~~~~~~~DivVn~t~~ 190 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDC----AVTIT-NRTVSRAEELAKLFAHTGSIQA-LSMDELEGHEFDLIINATSS 190 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHHTGGGSSEEE-CCSGGGTTCCCSEEEECCSC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCC----EEEEE-ECCHHHHHHHHHHhhccCCeeE-ecHHHhccCCCCEEEECCCC
Confidence 356799999999999999999999998 99999 999998887765 22 222 2333433 489999999975
Q ss_pred ccHHHHHHHhc-hhcCCCCEEEEEc
Q 024121 82 QVVKDVAMQIR-PLLSRKKLLVSVA 105 (272)
Q Consensus 82 ~~~~~v~~~l~-~~l~~~~~iis~~ 105 (272)
....++ ..+. ..++++.+++++.
T Consensus 191 ~~~~~~-~~i~~~~l~~~~~v~D~~ 214 (271)
T 1nyt_A 191 GISGDI-PAIPSSLIHPGIYCYDMF 214 (271)
T ss_dssp GGGTCC-CCCCGGGCCTTCEEEESC
T ss_pred CCCCCC-CCCCHHHcCCCCEEEEec
Confidence 443111 0111 1245666666653
No 250
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.22 E-value=4.4e-06 Score=72.41 Aligned_cols=83 Identities=19% Similarity=0.209 Sum_probs=58.5
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH----cCceeecCchhhhcc--CCEEEEeeC
Q 024121 10 SFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES----IGVKVLSDNNAVVEY--SDVVVFSVK 80 (272)
Q Consensus 10 ~~~IgiIG~G~mG~-~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~----~g~~~~~~~~~~~~~--aDivil~v~ 80 (272)
++||||||+|.||. ..+..+.+. ++ +|. ++ +++ +.+++.+ .++..+.+.++++.+ .|+|++|+|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~--~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 74 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETL----EVKTIF-DLH--VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTP 74 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTE----EEEEEE-CTT--CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSC
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCe----EEEEEE-CCC--HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCC
Confidence 47999999999998 455555553 34 664 66 888 3444433 477888899998875 899999999
Q ss_pred cccHHHHHHHhchhcCCCCEEE
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+....++..... ..|+-|+
T Consensus 75 ~~~h~~~~~~al---~aGk~Vl 93 (349)
T 3i23_A 75 AHTHYDLAKQAI---LAGKSVI 93 (349)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HcCCEEE
Confidence 887666654433 3455555
No 251
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=98.20 E-value=2.3e-06 Score=75.24 Aligned_cols=88 Identities=11% Similarity=0.220 Sum_probs=66.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee--cC----------------------
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL--SD---------------------- 64 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~--~~---------------------- 64 (272)
...+|+|||+|.+|...++.+...|. +|+++ ||++++.+.+.+.|.... ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga----~V~~~-d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~ 245 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA----VVMAT-DVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRK 245 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCSTTHHHHHHTTCEECCC-----------------------C
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHh
Confidence 45799999999999999999999998 89999 999988877777776543 11
Q ss_pred -----chhhhccCCEEEEee--Ccc----cH-HHHHHHhchhcCCCCEEEEEc
Q 024121 65 -----NNAVVEYSDVVVFSV--KPQ----VV-KDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 65 -----~~~~~~~aDivil~v--~~~----~~-~~v~~~l~~~l~~~~~iis~~ 105 (272)
..+.+.++|+||.|+ |.. .+ ++.+ ..++++.+|+++.
T Consensus 246 ~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l----~~mk~g~vivdva 294 (384)
T 1l7d_A 246 KQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMV----TKMKPGSVIIDLA 294 (384)
T ss_dssp CHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHH----TTSCTTCEEEETT
T ss_pred hhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHH----hcCCCCCEEEEEe
Confidence 445677899999998 421 12 3333 3457888888864
No 252
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.20 E-value=1.3e-05 Score=68.73 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=67.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHHc-----C--ceeecCchhhhccCCE
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FESI-----G--VKVLSDNNAVVEYSDV 74 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~----l~~~-----g--~~~~~~~~~~~~~aDi 74 (272)
.....+||+|||+|.||.+++..|+..|+ ..+|.++ |+++++++. +... . +....+.+ .+++||+
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~--~~el~L~-Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDi 90 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDL--ADELALV-DVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKL 90 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTC--CSEEEEE-CSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCC--CceEEEE-eCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCE
Confidence 34567899999999999999999998885 3479999 999876654 3221 1 12234544 5899999
Q ss_pred EEEee--Cc-------c-------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 75 VVFSV--KP-------Q-------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 75 vil~v--~~-------~-------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
||++. |. + .++++.+.+..+ .|+..++..+++..
T Consensus 91 Vvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd 140 (331)
T 4aj2_A 91 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPVD 140 (331)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred EEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChHH
Confidence 99986 22 1 123344555565 67878887777554
No 253
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.20 E-value=4.6e-06 Score=72.46 Aligned_cols=90 Identities=19% Similarity=0.262 Sum_probs=65.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhc-cCCEEEEeeCcccH
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVE-YSDVVVFSVKPQVV 84 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~-~aDivil~v~~~~~ 84 (272)
....++|+|+|+|+||..+++.|.+.|. +|.++ |+++++++++.+ .|+... +..+++. +||+++.|.....+
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga----kVvv~-D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGA----KLVVT-DVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchHHHh
Confidence 3567899999999999999999999999 99999 999998887766 576654 3345544 89999998654443
Q ss_pred H-HHHHHhchhcCCCCEEEEEcCC
Q 024121 85 K-DVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 85 ~-~v~~~l~~~l~~~~~iis~~~~ 107 (272)
. +.++. + ..++|+...++
T Consensus 244 ~~~~~~~----l-g~~iV~e~An~ 262 (364)
T 1leh_A 244 NDFTIPQ----L-KAKVIAGSADN 262 (364)
T ss_dssp STTHHHH----C-CCSEECCSCSC
T ss_pred CHHHHHh----C-CCcEEEeCCCC
Confidence 2 23333 3 34566654443
No 254
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.19 E-value=3.7e-06 Score=73.78 Aligned_cols=103 Identities=15% Similarity=0.189 Sum_probs=69.9
Q ss_pred CCCCeEEEEc-ccHHHHH-HH----HHHHhCCCCC---CCcE----EEEeCCCHHHHHHHHH-cCc-eeecCchhhhcc-
Q 024121 8 AESFILGFIG-AGKMAES-IA----KGVAKSGVLP---PDRI----CTAVHSNLKRRDAFES-IGV-KVLSDNNAVVEY- 71 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~-la----~~l~~~g~~~---~~~V----~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~~- 71 (272)
++.+|||||| +|.||.. .+ ..+.+.+.+. ...+ .++ +|++++++.+.+ .|+ .++.|.++++++
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~-~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~ 82 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILV-GRSAEKVEALAKRFNIARWTTDLDAALADK 82 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEE-CSSSHHHHHHHHHTTCCCEESCHHHHHHCS
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEE-cCCHHHHHHHHHHhCCCcccCCHHHHhcCC
Confidence 4557999999 9999997 66 6676654210 0011 378 999999988876 787 477888998865
Q ss_pred -CCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCC--CCHHHHHH
Q 024121 72 -SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQE 115 (272)
Q Consensus 72 -aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~--~~~~~l~~ 115 (272)
.|+|++|+|+....++.... +..|+-|+ +-++ .+.+..++
T Consensus 83 ~iD~V~i~tp~~~h~~~~~~a---l~~Gk~V~-~EKP~a~~~~~~~~ 125 (383)
T 3oqb_A 83 NDTMFFDAATTQARPGLLTQA---INAGKHVY-CEKPIATNFEEALE 125 (383)
T ss_dssp SCCEEEECSCSSSSHHHHHHH---HTTTCEEE-ECSCSCSSHHHHHH
T ss_pred CCCEEEECCCchHHHHHHHHH---HHCCCeEE-EcCCCCCCHHHHHH
Confidence 89999999987655555443 34556555 3343 34444433
No 255
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.19 E-value=4e-06 Score=74.16 Aligned_cols=70 Identities=23% Similarity=0.344 Sum_probs=56.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceee--cCchhhhccCCEEEEeeCcc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVL--SDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~--~~~~~~~~~aDivil~v~~~ 82 (272)
..++|+|||+|.||..+++.+...|. .+|+++ +|++++++.+.+ .|+.+. .+..+.+.++|+||.|++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~---~~V~v~-~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~ 238 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGV---RAVLVA-NRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAP 238 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCC---SEEEEE-CSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCC---CEEEEE-eCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCC
Confidence 56899999999999999999998886 379999 999988766554 676542 34556678999999999743
No 256
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=98.19 E-value=3.9e-06 Score=72.29 Aligned_cols=87 Identities=14% Similarity=0.125 Sum_probs=59.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCc------------------eeecCchhhhc
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGV------------------KVLSDNNAVVE 70 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~------------------~~~~~~~~~~~ 70 (272)
++||||+|+|.||..+++.|.+... .++...++++++++.++.+ .|+ .+..+..+++.
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~---~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~ 78 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDD---MELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE 78 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTT---EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCC---CEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhcc
Confidence 3699999999999999999987532 1554433888777665554 442 33456677778
Q ss_pred cCCEEEEeeCcccHHHHHHHhchhcCCCCEEE
Q 024121 71 YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 71 ~aDivil~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
++|+|++|+|+....+..... +..|+.|+
T Consensus 79 ~vDvV~~aTp~~~h~~~a~~~---l~aGk~Vi 107 (334)
T 2czc_A 79 KVDIIVDATPGGIGAKNKPLY---EKAGVKAI 107 (334)
T ss_dssp TCSEEEECCSTTHHHHHHHHH---HHHTCEEE
T ss_pred CCCEEEECCCccccHHHHHHH---HHcCCceE
Confidence 999999999987644444432 33455555
No 257
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.19 E-value=4.6e-06 Score=72.86 Aligned_cols=93 Identities=18% Similarity=0.250 Sum_probs=65.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCcee------ecCchhhhccCCEEEEeeC
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKV------LSDNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~------~~~~~~~~~~aDivil~v~ 80 (272)
...++|+|+|+|.+|..+++.+...|+ +|+++ +|++++.+.+.+ .|..+ ..+..+.+.++|+||.|++
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga----~V~~~-d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g 238 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA----QVTIL-DVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVL 238 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCC
Confidence 345899999999999999999999999 99999 999988877765 45432 1233456778999999986
Q ss_pred ccc--HHHH-HHHhchhcCCCCEEEEEc
Q 024121 81 PQV--VKDV-AMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 81 ~~~--~~~v-~~~l~~~l~~~~~iis~~ 105 (272)
... ...+ ..+..+.++++..||++.
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 432 1111 123334456778888764
No 258
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.19 E-value=5.3e-06 Score=69.29 Aligned_cols=92 Identities=15% Similarity=0.240 Sum_probs=65.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC---ceeecCchhhh-ccCCEEEEeeCcc
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG---VKVLSDNNAVV-EYSDVVVFSVKPQ 82 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g---~~~~~~~~~~~-~~aDivil~v~~~ 82 (272)
...+++.|+|+|.+|.+++..|.+.|. .+|+++ +|++++++++.+ .+ +... +.+++. .++|+||-|+|..
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~---~~v~i~-~R~~~~a~~la~~~~~~~~~~~-~~~~l~~~~~DivInaTp~g 192 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGP---SELVIA-NRDMAKALALRNELDHSRLRIS-RYEALEGQSFDIVVNATSAS 192 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCC---SEEEEE-CSCHHHHHHHHHHHCCTTEEEE-CSGGGTTCCCSEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCC---CEEEEE-eCCHHHHHHHHHHhccCCeeEe-eHHHhcccCCCEEEECCCCC
Confidence 456899999999999999999999994 289999 999999988876 22 3332 333432 6899999999864
Q ss_pred cHHHHHHHh-chhcCCCCEEEEEc
Q 024121 83 VVKDVAMQI-RPLLSRKKLLVSVA 105 (272)
Q Consensus 83 ~~~~v~~~l-~~~l~~~~~iis~~ 105 (272)
...+. ..+ ...++++.+++|+.
T Consensus 193 m~~~~-~~i~~~~l~~~~~V~Dlv 215 (272)
T 3pwz_A 193 LTADL-PPLPADVLGEAALAYELA 215 (272)
T ss_dssp GGTCC-CCCCGGGGTTCSEEEESS
T ss_pred CCCCC-CCCCHHHhCcCCEEEEee
Confidence 32110 001 12356788888874
No 259
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.16 E-value=0.0001 Score=60.56 Aligned_cols=163 Identities=15% Similarity=0.211 Sum_probs=109.7
Q ss_pred CceeecCchhhhccCCEEEEeeCccc-HHHHHHHhchhcCCCCEEEEEcCCCCHHHHHHH---hC--CCCEEEEccC-ch
Q 024121 58 GVKVLSDNNAVVEYSDVVVFSVKPQV-VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEW---TG--HSRFIRVMPN-TP 130 (272)
Q Consensus 58 g~~~~~~~~~~~~~aDivil~v~~~~-~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~---~~--~~~~~~~~p~-~~ 130 (272)
|+.+++|..|+++++|++|+-+|-.. -.++++.+.++++.|.+|.+++. ++.-.+... ++ +..+..+||. .|
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCT-ipp~~ly~~le~l~R~DvgIsS~HPaaVP 206 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACT-IPTTKFAKIFKDLGREDLNITSYHPGCVP 206 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSS-SCHHHHHHHHHHTTCTTSEEEECBCSSCT
T ss_pred CcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccC-CCHHHHHHHHHHhCcccCCeeccCCCCCC
Confidence 77888888999999999999998654 67889999999999988887654 555444333 33 3557777875 34
Q ss_pred hhhcCCceEEEeCCCCCHHHHHHHHHHhhhcCCe-EEcCcccchhHHHchHHHHHHHHHHHHHHH---H-HHcCCCHHHH
Q 024121 131 SAVGEAATVMSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGPAYIFLAIEALADG---G-VAAGLPRELA 205 (272)
Q Consensus 131 ~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~G~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~---~-~~~Gl~~~~a 205 (272)
.. .|.....- .-.++++.+.+.++.+..|+. +.+..+....+.-+ +....+....++.+. . +-.|-+.+.+
T Consensus 207 gt--~Gq~~~g~-~yAtEEqIeklveLaksa~k~ay~vPAdl~SpV~DM-gs~vTAv~~AGiL~Y~~~vtkIlgAP~~mi 282 (358)
T 2b0j_A 207 EM--KGQVYIAE-GYASEEAVNKLYEIGKIARGKAFKMPANLIGPVCDM-CSAVTATVYAGLLAYRDAVTKILGAPADFA 282 (358)
T ss_dssp TT--CCCEEEEE-SSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHHHHST-THHHHHHHHHHHHHHHHHHHTTSCCCHHHH
T ss_pred CC--CCcccccc-ccCCHHHHHHHHHHHHHhCCCeEecchhhccchhhh-HHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 33 44444332 235789999999999999865 77766533332211 222222222333322 2 3478888888
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 024121 206 LGLASQTVLGAASMVTKSGK 225 (272)
Q Consensus 206 ~~~~~~~~~g~~~~~~~~~~ 225 (272)
...+..++...+.++.++|.
T Consensus 283 e~q~~esL~tiasLve~~GI 302 (358)
T 2b0j_A 283 QMMADEALTQIHNLMKEKGI 302 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHHHhhH
Confidence 88888888888888876554
No 260
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.13 E-value=3.1e-06 Score=70.93 Aligned_cols=100 Identities=14% Similarity=0.222 Sum_probs=67.4
Q ss_pred CCCCCCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHH-----HHHHH---HcCceeecCchhhhccCCE
Q 024121 6 IPAESFILGFIG-AGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKR-----RDAFE---SIGVKVLSDNNAVVEYSDV 74 (272)
Q Consensus 6 ~~~~~~~IgiIG-~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~-----~~~l~---~~g~~~~~~~~~~~~~aDi 74 (272)
.|++++||+|+| +|+||+.+++.+.+. ++ ++. ++ +|++.. +..+. ..|+.++.|.++++.++|+
T Consensus 17 ~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~----eLvg~v-d~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDV 91 (288)
T 3ijp_A 17 QGPGSMRLTVVGANGRMGRELITAIQRRKDV----ELCAVL-VRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEG 91 (288)
T ss_dssp ----CEEEEESSTTSHHHHHHHHHHHTCSSE----EEEEEB-CCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSE
T ss_pred hccCCeEEEEECCCCHHHHHHHHHHHhCCCC----EEEEEE-ecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCE
Confidence 345567999999 899999999988764 34 554 55 876421 11221 2467778888998899999
Q ss_pred EEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCHHHH
Q 024121 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDL 113 (272)
Q Consensus 75 vil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l 113 (272)
||-+++|+...+.+.... ..+.-+|..+.|.+.+.+
T Consensus 92 vIDFT~p~a~~~~~~~~l---~~Gv~vViGTTG~~~e~~ 127 (288)
T 3ijp_A 92 ILDFSQPQASVLYANYAA---QKSLIHIIGTTGFSKTEE 127 (288)
T ss_dssp EEECSCHHHHHHHHHHHH---HHTCEEEECCCCCCHHHH
T ss_pred EEEcCCHHHHHHHHHHHH---HcCCCEEEECCCCCHHHH
Confidence 999998887666555433 345566666677876544
No 261
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.11 E-value=8.4e-06 Score=69.55 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=67.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHH--cCceeecCchhhh----------ccCCEE
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFES--IGVKVLSDNNAVV----------EYSDVV 75 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~--~g~~~~~~~~~~~----------~~aDiv 75 (272)
++||||||+ |.||...+..+.+.+. ++. ++ ++++++.. +.+ .++....+.++++ .+.|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~----~lvav~-d~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V 76 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGG----VLVASL-DPATNVGL-VDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYL 76 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTC----EEEEEE-CSSCCCGG-GGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEE
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCC----EEEEEE-cCCHHHHH-HHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEE
Confidence 589999999 7899999999998776 654 66 99987642 333 3567778888776 579999
Q ss_pred EEeeCcccHHHHHHHhchhcCCCCEEEEEcCC--CCHHHHHH
Q 024121 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQE 115 (272)
Q Consensus 76 il~v~~~~~~~v~~~l~~~l~~~~~iis~~~~--~~~~~l~~ 115 (272)
++|+|+....++..... ..|+-|+ +-++ .+.+..++
T Consensus 77 ~I~tP~~~H~~~~~~al---~aGkhVl-~EKPla~~~~ea~~ 114 (312)
T 3o9z_A 77 SIASPNHLHYPQIRMAL---RLGANAL-SEKPLVLWPEEIAR 114 (312)
T ss_dssp EECSCGGGHHHHHHHHH---HTTCEEE-ECSSSCSCHHHHHH
T ss_pred EECCCchhhHHHHHHHH---HCCCeEE-EECCCCCCHHHHHH
Confidence 99999887666654433 3455555 2343 34444443
No 262
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=98.10 E-value=9.3e-06 Score=69.45 Aligned_cols=96 Identities=11% Similarity=0.025 Sum_probs=66.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHH--cCceeecCchhhh-----------ccCCE
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFES--IGVKVLSDNNAVV-----------EYSDV 74 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~--~g~~~~~~~~~~~-----------~~aDi 74 (272)
++||||||+ |.||...+..+.+.+. ++. ++ ++++++. .+.+ .++....+.++++ .+.|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~----~lvav~-d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~ 76 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGN----CLVSAY-DINDSVG-IIDSISPQSEFFTEFEFFLDHASNLKRDSATALDY 76 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTC----EEEEEE-CSSCCCG-GGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCC----EEEEEE-cCCHHHH-HHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcE
Confidence 589999999 7999999999998776 654 56 9988764 2333 3567778888776 46899
Q ss_pred EEEeeCcccHHHHHHHhchhcCCCCEEEEEcCC--CCHHHHHH
Q 024121 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQE 115 (272)
Q Consensus 75 vil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~--~~~~~l~~ 115 (272)
|++|+|+....++..... ..|+-|+ +-++ .+.++.++
T Consensus 77 V~I~tP~~~H~~~~~~al---~aGkhVl-~EKPla~~~~ea~~ 115 (318)
T 3oa2_A 77 VSICSPNYLHYPHIAAGL---RLGCDVI-CEKPLVPTPEMLDQ 115 (318)
T ss_dssp EEECSCGGGHHHHHHHHH---HTTCEEE-ECSSCCSCHHHHHH
T ss_pred EEECCCcHHHHHHHHHHH---HCCCeEE-EECCCcCCHHHHHH
Confidence 999999887666654433 3455554 2233 34444433
No 263
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=98.07 E-value=2.6e-05 Score=69.39 Aligned_cols=92 Identities=21% Similarity=0.331 Sum_probs=64.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhC--------CCCCCCcEE-EEeCCCHHHHHHHHHcCceeecCchhhhc--cCCE
Q 024121 6 IPAESFILGFIGAGKMAESIAKGVAKS--------GVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDV 74 (272)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~la~~l~~~--------g~~~~~~V~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDi 74 (272)
.||+..||||||+|.+|+.+++.|.++ |. .-+|. ++ +|++++.+.+. .+...+.|.+++++ +.|+
T Consensus 6 ~MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~--~i~lvaV~-d~~~~~~~~~~-~~~~~~~d~~ell~d~diDv 81 (444)
T 3mtj_A 6 QGMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGR--EIRVVRAA-VRNLDKAEALA-GGLPLTTNPFDVVDDPEIDI 81 (444)
T ss_dssp CSCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSS--CEEEEEEE-CSCHHHHHHHH-TTCCEESCTHHHHTCTTCCE
T ss_pred hhhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCC--CEEEEEEE-ECCHHHhhhhc-ccCcccCCHHHHhcCCCCCE
Confidence 456678999999999999998877642 21 11444 56 99998876653 35567788888886 5799
Q ss_pred EEEeeCc-ccHHHHHHHhchhcCCCCEEEEE
Q 024121 75 VVFSVKP-QVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 75 vil~v~~-~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
|+.|+|+ +...+.+.+ .+..|+-|++.
T Consensus 82 Vve~tp~~~~h~~~~~~---AL~aGKhVvte 109 (444)
T 3mtj_A 82 VVELIGGLEPARELVMQ---AIANGKHVVTA 109 (444)
T ss_dssp EEECCCSSTTHHHHHHH---HHHTTCEEEEC
T ss_pred EEEcCCCchHHHHHHHH---HHHcCCEEEEC
Confidence 9999986 555555433 24567777743
No 264
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=98.06 E-value=1.1e-05 Score=67.37 Aligned_cols=68 Identities=16% Similarity=0.241 Sum_probs=54.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCccc
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~ 83 (272)
.+++.|||+|.+|.+++..|.+.|. .+|+++ ||++++++.+.+ .+.....+.. ..++|+||-|+|...
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~---~~i~v~-nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm 187 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGF---EKLKIY-ARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGM 187 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTC---CCEEEE-CSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC---CEEEEE-eCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCc
Confidence 4689999999999999999999986 379999 999999988876 4544332222 468999999998654
No 265
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.05 E-value=8.4e-06 Score=68.94 Aligned_cols=85 Identities=12% Similarity=0.080 Sum_probs=58.0
Q ss_pred CCCCCCCeEEEEcccHHHHHHHHHHHh----CCCCCCCcEE-EEeCCCHHHHHHHHHcCceeecCchhhhc--cCCEEEE
Q 024121 5 PIPAESFILGFIGAGKMAESIAKGVAK----SGVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVF 77 (272)
Q Consensus 5 ~~~~~~~~IgiIG~G~mG~~la~~l~~----~g~~~~~~V~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDivil 77 (272)
+.+++++||||||+|.||...+..+.+ .+. ++. ++ +|+... .+.|+. ..+.+++++ +.|+|++
T Consensus 2 ~~~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~----~lvav~-d~~~~a----~~~g~~-~~~~~ell~~~~vD~V~i 71 (294)
T 1lc0_A 2 ITNSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFL----NLIGFV-SRRELG----SLDEVR-QISLEDALRSQEIDVAYI 71 (294)
T ss_dssp CCCCCSEEEEEECCSHHHHHHHHHHTSHHHHTTE----EEEEEE-CSSCCC----EETTEE-BCCHHHHHHCSSEEEEEE
T ss_pred CCCCCcceEEEEEEcHHHHHHHHHHhccccCCCE----EEEEEE-CchHHH----HHcCCC-CCCHHHHhcCCCCCEEEE
Confidence 445567899999999999999988865 233 554 56 876421 124555 367888876 6899999
Q ss_pred eeCcccHHHHHHHhchhcCCCCEEE
Q 024121 78 SVKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 78 ~v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
|+|+....++.... +..|+-|+
T Consensus 72 ~tp~~~H~~~~~~a---l~aGkhVl 93 (294)
T 1lc0_A 72 CSESSSHEDYIRQF---LQAGKHVL 93 (294)
T ss_dssp CSCGGGHHHHHHHH---HHTTCEEE
T ss_pred eCCcHhHHHHHHHH---HHCCCcEE
Confidence 99987665555443 33455444
No 266
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.04 E-value=1.2e-05 Score=68.92 Aligned_cols=95 Identities=13% Similarity=0.178 Sum_probs=61.9
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCC--CCCCCcEEEEeCCCHHH--HHHHHHcC----cee---ecCchhhhccCCEEE
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSG--VLPPDRICTAVHSNLKR--RDAFESIG----VKV---LSDNNAVVEYSDVVV 76 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g--~~~~~~V~v~~~r~~~~--~~~l~~~g----~~~---~~~~~~~~~~aDivi 76 (272)
+.|||+||| +|.+|.+++..|...| + +|.++ |++++. ..++.... +.. ..+..++++++|+||
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~----ev~l~-Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi 81 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVS----VLHLY-DVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLII 81 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEE----EEEEE-ESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCC----EEEEE-eCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEE
Confidence 457999999 7999999999999888 5 89999 987652 22233311 222 224567789999999
Q ss_pred EeeC--cc--------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 77 FSVK--PQ--------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 77 l~v~--~~--------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
++.. .. .+.++++.+..+ .++..++..++++.
T Consensus 82 ~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SNPv~ 129 (326)
T 1smk_A 82 VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISNPVN 129 (326)
T ss_dssp ECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHH
T ss_pred EcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCchH
Confidence 9973 21 133444555554 36666665555443
No 267
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.04 E-value=3.7e-06 Score=70.31 Aligned_cols=99 Identities=20% Similarity=0.209 Sum_probs=65.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHh-CCCCCCCcEE-EEeCCCHHHH--HHH------HHcCceeecCchhhhccCCEEEE
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAK-SGVLPPDRIC-TAVHSNLKRR--DAF------ESIGVKVLSDNNAVVEYSDVVVF 77 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~-~g~~~~~~V~-v~~~r~~~~~--~~l------~~~g~~~~~~~~~~~~~aDivil 77 (272)
..|||+|+|+ |.||+.+++.+.+ .++ ++. ++ ++++++. +.+ ...++.+.++.++++.++|+||-
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~----elva~~-d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVID 78 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGV----QLGAAL-EREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFID 78 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTE----ECCCEE-CCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCC----EEEEEE-ecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEE
Confidence 4579999998 9999999998774 455 665 66 8876431 111 11245566777888889999997
Q ss_pred eeCcccHHHHHHHhchhcCCCCEEEEEcCCCCHHHHHH
Q 024121 78 SVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQE 115 (272)
Q Consensus 78 ~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~ 115 (272)
+++|....+.+.... ..+.-+|..+.|.+.+..++
T Consensus 79 ft~p~~~~~~~~~a~---~~G~~vVigTtG~~~e~~~~ 113 (273)
T 1dih_A 79 FTRPEGTLNHLAFCR---QHGKGMVIGTTGFDEAGKQA 113 (273)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEECCCCCCHHHHHH
T ss_pred cCChHHHHHHHHHHH---hCCCCEEEECCCCCHHHHHH
Confidence 777776666655443 34555554445777765433
No 268
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.04 E-value=3.8e-06 Score=68.87 Aligned_cols=81 Identities=17% Similarity=0.200 Sum_probs=60.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
.|||+++|+|+||+.+++. . ++ ++ .+| + ++..++ |+.++.|.++++.++|+|+-|-.++.+.+.+
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~l----eLv~v~-~---~k~gel---gv~a~~d~d~lla~pD~VVe~A~~~av~e~~ 77 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NF----EKIYAY-D---RISKDI---PGVVRLDEFQVPSDVSTVVECASPEAVKEYS 77 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CC----SEEEEE-C---SSCCCC---SSSEECSSCCCCTTCCEEEECSCHHHHHHHH
T ss_pred cceEEEECcCHHHHHHHhc--C-Cc----EEEEEE-e---cccccc---CceeeCCHHHHhhCCCEEEECCCHHHHHHHH
Confidence 4899999999999999997 4 66 65 567 6 333322 7777788888888999999998887777655
Q ss_pred HHhchhcCCCCEEEEEcCC
Q 024121 89 MQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~ 107 (272)
..+ |+.|+-++.++.+
T Consensus 78 ~~i---L~aG~dvv~~S~g 93 (253)
T 1j5p_A 78 LQI---LKNPVNYIIISTS 93 (253)
T ss_dssp HHH---TTSSSEEEECCGG
T ss_pred HHH---HHCCCCEEEcChh
Confidence 554 4677777766544
No 269
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.04 E-value=1.1e-05 Score=67.92 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=69.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHHcCceeecCchhhhc--cCCEEEEeeCcccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDivil~v~~~~~ 84 (272)
+.+||+|+|+ |+||..+++++.+.|+ ++. .. ++..... .-.|+.+..+..++.+ ++|++++++|++.+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~----~~v~~V-nP~~~g~---~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~ 77 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGT----KIVAGV-TPGKGGM---EVLGVPVYDTVKEAVAHHEVDASIIFVPAPAA 77 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC----EEEEEE-CTTCTTC---EETTEEEESSHHHHHHHSCCSEEEECCCHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCC----eEEEEE-CCCCCCc---eECCEEeeCCHHHHhhcCCCCEEEEecCHHHH
Confidence 3578999998 9999999999999898 643 44 5442100 1258888888888887 89999999999999
Q ss_pred HHHHHHhchhcCCCCEEEEEcCCCCHHH
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKD 112 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~~~~~~ 112 (272)
.+++.+.... .- +.++-.+.|++.+.
T Consensus 78 ~~~~~ea~~~-Gi-~~vVi~t~G~~~~~ 103 (288)
T 1oi7_A 78 ADAALEAAHA-GI-PLIVLITEGIPTLD 103 (288)
T ss_dssp HHHHHHHHHT-TC-SEEEECCSCCCHHH
T ss_pred HHHHHHHHHC-CC-CEEEEECCCCCHHH
Confidence 8888876543 12 33444667887653
No 270
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=98.04 E-value=1e-05 Score=72.71 Aligned_cols=75 Identities=13% Similarity=0.233 Sum_probs=58.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCcee-ecCc------hhh-hccCCEEEEee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKV-LSDN------NAV-VEYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~-~~~~------~~~-~~~aDivil~v 79 (272)
+.|||-|+|+|.+|+.+|+.|.+.|| +|++. ++++++++++.+ .++.+ ..|. .++ +++||+++.++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~----~v~vI-d~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENN----DITIV-DKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTE----EEEEE-ESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCC----CEEEE-ECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 57999999999999999999999999 99999 999999998876 56543 2221 122 56899998888
Q ss_pred CcccHHHHH
Q 024121 80 KPQVVKDVA 88 (272)
Q Consensus 80 ~~~~~~~v~ 88 (272)
+++...-+.
T Consensus 77 ~~De~Nl~~ 85 (461)
T 4g65_A 77 NTDETNMAA 85 (461)
T ss_dssp SCHHHHHHH
T ss_pred CChHHHHHH
Confidence 777654333
No 271
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.04 E-value=1.9e-05 Score=70.14 Aligned_cols=87 Identities=24% Similarity=0.368 Sum_probs=61.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-c-C----------------------ceee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-I-G----------------------VKVL 62 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~-v~~~r~~~~~~~l~~-~-g----------------------~~~~ 62 (272)
+..||||||+|.||+.++..+.+. +. +|. ++ +|++++++.+.+ . | ..++
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~v----eLvAV~-D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~ 96 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGI----EVGALS-ARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVT 96 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSE----EEEEEE-CSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEE
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCc----EEEEEE-eCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEE
Confidence 457999999999999999887653 33 554 55 999998877654 2 4 3466
Q ss_pred cCchhhhc--cCCEEEEeeCcc-cHHHHHHHhchhcCCCCEEEE
Q 024121 63 SDNNAVVE--YSDVVVFSVKPQ-VVKDVAMQIRPLLSRKKLLVS 103 (272)
Q Consensus 63 ~~~~~~~~--~aDivil~v~~~-~~~~v~~~l~~~l~~~~~iis 103 (272)
+|.+++++ +.|+|++|+|+. ...++... .+..|+-|+.
T Consensus 97 ~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv~ 137 (446)
T 3upl_A 97 DDNDLILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLVM 137 (446)
T ss_dssp SCHHHHHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEEE
T ss_pred CCHHHHhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEEe
Confidence 78888887 589999999753 32333322 2346777774
No 272
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.03 E-value=4e-05 Score=64.53 Aligned_cols=95 Identities=21% Similarity=0.293 Sum_probs=63.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH----cC--ce--eecCchhhhccCCEEEEe
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES----IG--VK--VLSDNNAVVEYSDVVVFS 78 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~----~l~~----~g--~~--~~~~~~~~~~~aDivil~ 78 (272)
|||+|||+|.+|++++..|...+.. .++.++ |.++++++ +|.. .+ .. ...+ .+.+++||+|+++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~--~el~L~-Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d-~~~~~~aDvVvit 76 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV--DEIALV-DIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC--SEEEEE-CSSHHHHHHHHHHHHHHHGGGTCCCEEEEESC-GGGGTTCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC--CEEEEE-eCCCCcchhhhhhhhcccccCCCCCeEecCCC-HHHhCCCCEEEEe
Confidence 7999999999999999999988763 489999 99986543 2222 11 22 2334 3568999999998
Q ss_pred e--C--ccc------------HHHHHHHhchhcCCCCEEEEEcCCCCH
Q 024121 79 V--K--PQV------------VKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (272)
Q Consensus 79 v--~--~~~------------~~~v~~~l~~~l~~~~~iis~~~~~~~ 110 (272)
- | |.. ++++.+++..+ .|+.+++-.++++..
T Consensus 77 AG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvsNPvd~ 123 (294)
T 2x0j_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPMDV 123 (294)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSHHH
T ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEecCcchh
Confidence 6 2 321 12333455555 477777777776543
No 273
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.00 E-value=2.5e-05 Score=69.91 Aligned_cols=89 Identities=13% Similarity=0.192 Sum_probs=69.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCc-ccH-H
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV-K 85 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~-~~~-~ 85 (272)
...++++|+|+|.+|.++++.|...|. +|.++ ++++.+.......++.+ .+.++++..+|+|+.+... +.+ .
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA----~Viv~-D~~~~~a~~Aa~~g~dv-~~lee~~~~aDvVi~atG~~~vl~~ 336 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA----RVIVT-EIDPICALQATMEGLQV-LTLEDVVSEADIFVTTTGNKDIIML 336 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEE-CCGGGTTTTCSEEEECSSCSCSBCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHhCCcc-CCHHHHHHhcCEEEeCCCChhhhhH
Confidence 456899999999999999999999999 99999 99998887777777765 4667888899999998753 333 2
Q ss_pred HHHHHhchhcCCCCEEEEEcC
Q 024121 86 DVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~ 106 (272)
+.+ ..++++.+|++...
T Consensus 337 e~l----~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 337 DHM----KKMKNNAIVCNIGH 353 (488)
T ss_dssp HHH----TTSCTTEEEEESSS
T ss_pred HHH----HhcCCCeEEEEcCC
Confidence 233 33567878777543
No 274
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.98 E-value=2.1e-05 Score=64.00 Aligned_cols=99 Identities=10% Similarity=0.106 Sum_probs=64.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cCc---h---hh-hccCCEEEEeeC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN---N---AV-VEYSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~~---~---~~-~~~aDivil~v~ 80 (272)
..++|.|+|+|.+|..+++.|.+.| .|+++ ++++++.+.+. .|+.+. .|. + ++ +.++|.||++++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g-----~v~vi-d~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSE-----VFVLA-EDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSE-----EEEEE-SCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CCCEEEEECCChHHHHHHHHHHhCC-----eEEEE-ECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 4578999999999999999998876 27788 99999888777 665432 121 1 22 568999999998
Q ss_pred cccHHHHHHHhchhcCCC-CEEEEEcCCCCHHHHH
Q 024121 81 PQVVKDVAMQIRPLLSRK-KLLVSVAAGVKLKDLQ 114 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~-~~iis~~~~~~~~~l~ 114 (272)
++...-.+......+.++ ++++...+....+.+.
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~ 115 (234)
T 2aef_A 81 SDSETIHCILGIRKIDESVRIIAEAERYENIEQLR 115 (234)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEECSSGGGHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECCHhHHHHHH
Confidence 876544443333345566 4555443332333343
No 275
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.97 E-value=0.0001 Score=62.56 Aligned_cols=95 Identities=15% Similarity=0.198 Sum_probs=62.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHH----HHH-----cCceeecCchhhhccCCEEEEe
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDA----FES-----IGVKVLSDNNAVVEYSDVVVFS 78 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r--~~~~~~~----l~~-----~g~~~~~~~~~~~~~aDivil~ 78 (272)
|||+|+| +|.+|++++..|...|+. .++.++ |+ ++++++. +.. ..+.+..+..++++++|+||++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~--~el~L~-Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ 77 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIA--DEVVFV-DIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVIT 77 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCC--SEEEEE-CCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC--CEEEEE-cCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEc
Confidence 6999999 999999999999887752 368889 99 7765432 221 1233433446778999999999
Q ss_pred eC--cc--------------cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 79 VK--PQ--------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 79 v~--~~--------------~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
.. .. .++++++.+..+ .++..++..++++.
T Consensus 78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv~ 123 (303)
T 1o6z_A 78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVD 123 (303)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChHH
Confidence 73 11 123444555554 56666665555543
No 276
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.96 E-value=1.5e-05 Score=69.27 Aligned_cols=107 Identities=15% Similarity=0.276 Sum_probs=64.4
Q ss_pred CCCCCCCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cC-----ceeecCchhhhc
Q 024121 2 DAFPIPAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IG-----VKVLSDNNAVVE 70 (272)
Q Consensus 2 ~~~~~~~~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----~g-----~~~~~~~~~~~~ 70 (272)
+++..+|+.+||+|+| +|.+|..+.+.|.+... .++...+++.. .-.++.. .+ +.+ .+ ++...
T Consensus 8 ~~~~~~M~~~kV~IiGAtG~iG~~llr~L~~~p~---~elvai~~~~~-~g~~~~~~~~~~~~~v~~dl~~-~~-~~~~~ 81 (359)
T 1xyg_A 8 SSSVKPEKDIRIGLLGASGYTGAEIVRLLANHPH---FQVTLMTADRK-AGQSMESVFPHLRAQKLPTLVS-VK-DADFS 81 (359)
T ss_dssp -------CCEEEEEECCSSHHHHHHHHHHHTCSS---EEEEEEBCSTT-TTSCHHHHCGGGTTSCCCCCBC-GG-GCCGG
T ss_pred CcccccccCcEEEEECcCCHHHHHHHHHHHcCCC---cEEEEEeCchh-cCCCHHHhCchhcCccccccee-cc-hhHhc
Confidence 3455566668999999 89999999999987643 26665524432 1112211 12 112 22 34456
Q ss_pred cCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCC---HHHHHHHhC
Q 024121 71 YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK---LKDLQEWTG 118 (272)
Q Consensus 71 ~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~---~~~l~~~~~ 118 (272)
++|+||+|+|.....+..... ..|..+||.++... .+..+++++
T Consensus 82 ~vDvVf~atp~~~s~~~a~~~----~aG~~VId~sa~~R~~~~~~y~~~y~ 128 (359)
T 1xyg_A 82 TVDAVFCCLPHGTTQEIIKEL----PTALKIVDLSADFRLRNIAEYEEWYG 128 (359)
T ss_dssp GCSEEEECCCTTTHHHHHHTS----CTTCEEEECSSTTTCSCHHHHHHHHS
T ss_pred CCCEEEEcCCchhHHHHHHHH----hCCCEEEECCccccCCchhhhhhhhc
Confidence 899999999988776666543 46778999876543 344566654
No 277
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.94 E-value=7.6e-06 Score=70.50 Aligned_cols=84 Identities=15% Similarity=0.159 Sum_probs=58.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEE-EEeCCCH-HHHHHHHH----cC--ceeecCchhhhc--cCCEEEEee
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRIC-TAVHSNL-KRRDAFES----IG--VKVLSDNNAVVE--YSDVVVFSV 79 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~-v~~~r~~-~~~~~l~~----~g--~~~~~~~~~~~~--~aDivil~v 79 (272)
++||||||+|.+|...+..+ ..+. +|. ++ ++++ ++.+++.+ .| ...+.|.+++++ +.|+|++|+
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~----~lvav~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~t 75 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEEC----SITGIA-PGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINT 75 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTE----EEEEEE-CSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECS
T ss_pred ceEEEEEccchhHHHHHHhc-CCCc----EEEEEe-cCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 47999999999998777766 4444 665 56 9887 34444433 35 467788889887 489999999
Q ss_pred CcccHHHHHHHhchhcCCCCEEE
Q 024121 80 KPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 80 ~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
|+....++..... ..|+-|+
T Consensus 76 p~~~H~~~~~~al---~aGkhVl 95 (337)
T 3ip3_A 76 VFSLNGKILLEAL---ERKIHAF 95 (337)
T ss_dssp SHHHHHHHHHHHH---HTTCEEE
T ss_pred CcchHHHHHHHHH---HCCCcEE
Confidence 9876555554432 3455444
No 278
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.94 E-value=1.8e-05 Score=71.11 Aligned_cols=88 Identities=18% Similarity=0.215 Sum_probs=63.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cCcee-ec------CchhhhccCCEEEEee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IGVKV-LS------DNNAVVEYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~-~~------~~~~~~~~aDivil~v 79 (272)
++++|.|+|+|.+|++++..|.+. |+ +|+++ +|++++++.+.+ .++.. .. +..++++++|+||.|+
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~----~V~v~-~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t 96 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDI----NVTVA-CRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI 96 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTE----EEEEE-ESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCC----eEEEE-ECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence 457899999999999999999998 67 89999 999999888865 34432 11 2235567899999999
Q ss_pred CcccHHHHHHHhchhcCCCCEEEEE
Q 024121 80 KPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 80 ~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
|......+... .+.++..+++.
T Consensus 97 p~~~~~~v~~a---~l~~g~~vvd~ 118 (467)
T 2axq_A 97 PYTFHPNVVKS---AIRTKTDVVTS 118 (467)
T ss_dssp CGGGHHHHHHH---HHHHTCEEEEC
T ss_pred chhhhHHHHHH---HHhcCCEEEEe
Confidence 87644444322 13355666654
No 279
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.93 E-value=4.5e-05 Score=65.04 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=64.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH--HHHHHc--C--ceee---cCchhhhccCCEEEEee-
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR--DAFESI--G--VKVL---SDNNAVVEYSDVVVFSV- 79 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~--~~l~~~--g--~~~~---~~~~~~~~~aDivil~v- 79 (272)
|||+|||+ |.+|.+++..|...|. ..+|.++ |+++.+. .++... . +... ++..++++++|+||++.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~--~~ev~L~-Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag 77 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL--VSRLTLY-DIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAG 77 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT--CSEEEEE-ESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC--CcEEEEE-eCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCC
Confidence 69999998 9999999999998883 2389999 9986221 122221 1 2221 35667899999999997
Q ss_pred -Cc--------------ccHHHHHHHhchhcCCCCEEEEEcCCCCH
Q 024121 80 -KP--------------QVVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (272)
Q Consensus 80 -~~--------------~~~~~v~~~l~~~l~~~~~iis~~~~~~~ 110 (272)
|. ..+.++.+.+..+. |+..++..++++..
T Consensus 78 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv~~ 122 (314)
T 1mld_A 78 VPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVNS 122 (314)
T ss_dssp CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCcch
Confidence 22 12445555666554 66677766665543
No 280
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.92 E-value=4.2e-05 Score=65.89 Aligned_cols=91 Identities=11% Similarity=0.128 Sum_probs=59.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeec-----------------CchhhhccC
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLS-----------------DNNAVVEYS 72 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~-----------------~~~~~~~~a 72 (272)
+||||+|+|.||..+++.|.+... -++...++++++...++.. .|+.... +.+++..++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~---~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~v 78 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPD---MKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTS 78 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTT---EEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCC---CEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCC
Confidence 589999999999999999887532 1554333887665544443 3444322 223444579
Q ss_pred CEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCC
Q 024121 73 DVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 73 Divil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
|+||.|+|.....+..+... ..+..+|+.++.
T Consensus 79 DvV~~aTp~~~s~~~a~~~~---~aG~kvV~~sa~ 110 (340)
T 1b7g_O 79 DIVVDTTPNGVGAQYKPIYL---QLQRNAIFQGGE 110 (340)
T ss_dssp SEEEECCSTTHHHHHHHHHH---HTTCEEEECTTS
T ss_pred CEEEECCCCchhHHHHHHHH---HcCCeEEEeCCC
Confidence 99999999887666665432 345556665443
No 281
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.89 E-value=6.1e-05 Score=63.87 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=69.7
Q ss_pred CCCeEEEE-cc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhc--cCCEEEEeeCcccH
Q 024121 9 ESFILGFI-GA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiI-G~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDivil~v~~~~~ 84 (272)
+.++++|| |+ |++|...+++|.+.|+ ++ ++ ..+|.+.. -.-.|+.+..+..|+.+ +.|++++++|++.+
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~G~----~~-v~-~VnP~~~g-~~i~G~~vy~sl~el~~~~~vD~avI~vP~~~~ 84 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEYGT----NL-VG-GTTPGKGG-KTHLGLPVFNTVKEAKEQTGATASVIYVPPPFA 84 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC----EE-EE-EECTTCTT-CEETTEEEESSHHHHHHHHCCCEEEECCCHHHH
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHCCC----cE-EE-EeCCCcCc-ceECCeeeechHHHhhhcCCCCEEEEecCHHHH
Confidence 44679999 98 9999999999999998 73 33 33443210 00158888888889888 89999999999999
Q ss_pred HHHHHHhchhcCCCCEEEEEcCCCCHHH
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKD 112 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~~~~~~ 112 (272)
.++++++... .- +.++..+.|++.++
T Consensus 85 ~~~~~e~i~~-Gi-~~iv~~t~G~~~~~ 110 (305)
T 2fp4_A 85 AAAINEAIDA-EV-PLVVCITEGIPQQD 110 (305)
T ss_dssp HHHHHHHHHT-TC-SEEEECCCCCCHHH
T ss_pred HHHHHHHHHC-CC-CEEEEECCCCChHH
Confidence 9988876543 12 35555778887653
No 282
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.88 E-value=1.9e-05 Score=68.06 Aligned_cols=91 Identities=9% Similarity=0.119 Sum_probs=58.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c------------------CceeecCchhhhc
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I------------------GVKVLSDNNAVVE 70 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~------------------g~~~~~~~~~~~~ 70 (272)
++||||+|+|.||..+++.|.++.. .++...++++++...++.. . ++.+..+..++..
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~---~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~ 77 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDD---MKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD 77 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSS---EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCC---cEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhc
Confidence 3689999999999999999887432 1554332776554433332 2 2222234456667
Q ss_pred cCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcC
Q 024121 71 YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 71 ~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
++|+||.|+|.....+...... ..|+.||+.++
T Consensus 78 ~vDvV~~atp~~~~~~~a~~~l---~aG~~VId~sp 110 (337)
T 1cf2_P 78 EADIVIDCTPEGIGAKNLKMYK---EKGIKAIFQGG 110 (337)
T ss_dssp TCSEEEECCSTTHHHHHHHHHH---HHTCCEEECTT
T ss_pred CCCEEEECCCchhhHHHHHHHH---HcCCEEEEecC
Confidence 8999999999887666665443 23455665543
No 283
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.88 E-value=2.5e-05 Score=67.82 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=58.4
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH----HHHHHHH-----------cCceee-cCchhhhc-c
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLK----RRDAFES-----------IGVKVL-SDNNAVVE-Y 71 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~----~~~~l~~-----------~g~~~~-~~~~~~~~-~ 71 (272)
++||+|+| +|.+|..+.+.|.++.. .+|... ++++. ....... ..+.+. .++++..+ +
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~---~ev~~i-~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPM---FELTAL-AASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFED 83 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSS---EEEEEE-EECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTT
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCC---CEEEEE-EcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCC
Confidence 47999999 89999999999887642 266655 43221 1211100 111111 24455446 8
Q ss_pred CCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCC
Q 024121 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 72 aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
+|+||+|+|.....+....+. ..|..|||.++.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~---~aG~~VId~s~~ 116 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFA---KEGKLIFSNASA 116 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred CCEEEECCCchHHHHHHHHHH---HCCCEEEECCch
Confidence 999999999887777766654 467789987654
No 284
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.88 E-value=2.8e-05 Score=68.75 Aligned_cols=90 Identities=14% Similarity=0.119 Sum_probs=62.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c------Cceee-------cCchhhhcc--CC
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I------GVKVL-------SDNNAVVEY--SD 73 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~------g~~~~-------~~~~~~~~~--aD 73 (272)
|+||.|||+|.+|+.+++.|.+.|.. ..+|.++ +|++++++++.+ . .+... .+..+++++ +|
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~-~~~V~v~-~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREV-FSHITLA-SRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTT-CCEEEEE-ESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC-ceEEEEE-ECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 36899999999999999999998731 0278999 999999887765 1 23221 123445555 89
Q ss_pred EEEEeeCcccHHHHHHHhchhcCCCCEEEEE
Q 024121 74 VVVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 74 ivil~v~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
+||.|+++.....++.... ..++.++++
T Consensus 79 vVin~ag~~~~~~v~~a~l---~~g~~vvD~ 106 (405)
T 4ina_A 79 IVLNIALPYQDLTIMEACL---RTGVPYLDT 106 (405)
T ss_dssp EEEECSCGGGHHHHHHHHH---HHTCCEEES
T ss_pred EEEECCCcccChHHHHHHH---HhCCCEEEe
Confidence 9999998776555554332 345556664
No 285
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.87 E-value=2.3e-05 Score=68.22 Aligned_cols=88 Identities=17% Similarity=0.196 Sum_probs=64.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc---eee----cCchhhhccCCEEEEeeCc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV---KVL----SDNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~---~~~----~~~~~~~~~aDivil~v~~ 81 (272)
...+|.|+|+|.+|.+.+..+...|. +|+++ +|++++++.+.+.+. ... .+..+.+.++|+||-|++.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga----~V~v~-dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA----QVQIF-DINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 34799999999999999999999998 99999 999999888776432 111 1233556789999999853
Q ss_pred cc-------HHHHHHHhchhcCCCCEEEEEc
Q 024121 82 QV-------VKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 82 ~~-------~~~v~~~l~~~l~~~~~iis~~ 105 (272)
.. .++.+ +.++++.+++++.
T Consensus 241 ~~~~~~~li~~~~~----~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 241 PGRRAPILVPASLV----EQMRTGSVIVDVA 267 (361)
T ss_dssp TTSSCCCCBCHHHH----TTSCTTCEEEETT
T ss_pred CCCCCCeecCHHHH----hhCCCCCEEEEEe
Confidence 22 22332 3456788888764
No 286
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.86 E-value=2.1e-05 Score=70.48 Aligned_cols=88 Identities=16% Similarity=0.231 Sum_probs=60.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC-cee----ec---CchhhhccCCEEEEee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG-VKV----LS---DNNAVVEYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g-~~~----~~---~~~~~~~~aDivil~v 79 (272)
.+++|.|+|+|.+|++++..|.+.|+ +|+++ +|++++++.+.+ .+ +.. .. +..++++++|+||.|+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~----~V~v~-~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a 76 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI----KVTVA-CRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI 76 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC----EEEEE-ESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC----EEEEE-ECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence 46789999999999999999999998 99999 999988877665 22 321 11 2235567899999999
Q ss_pred CcccHHHHHHHhchhcCCCCEEEEE
Q 024121 80 KPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 80 ~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
|......+.... +.+++.+++.
T Consensus 77 ~~~~~~~i~~a~---l~~g~~vvd~ 98 (450)
T 1ff9_A 77 PYTFHATVIKSA---IRQKKHVVTT 98 (450)
T ss_dssp C--CHHHHHHHH---HHHTCEEEES
T ss_pred ccccchHHHHHH---HhCCCeEEEe
Confidence 875443333221 2344555544
No 287
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.86 E-value=4.5e-05 Score=64.35 Aligned_cols=93 Identities=16% Similarity=0.194 Sum_probs=67.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhc--cCCEEEEeeCcccHHHH
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDivil~v~~~~~~~v 87 (272)
.++.|+|+ |+||+.+.+++.+.|+ + .++ ..+|.+... .-.|+.+..+..++.+ ++|++++++|++.+.++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~----~-~V~-~VnP~~~g~-~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~ 86 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGT----K-IVG-GVTPGKGGQ-NVHGVPVFDTVKEAVKETDANASVIFVPAPFAKDA 86 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC----C-EEE-EECTTCTTC-EETTEEEESSHHHHHHHHCCCEEEECCCHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCC----e-EEE-EeCCCCCCc-eECCEeeeCCHHHHhhcCCCCEEEEccCHHHHHHH
Confidence 46888899 9999999999999998 6 333 334432100 0158888888888887 89999999999999888
Q ss_pred HHHhchhcCCCCEEEEEcCCCCHHH
Q 024121 88 AMQIRPLLSRKKLLVSVAAGVKLKD 112 (272)
Q Consensus 88 ~~~l~~~l~~~~~iis~~~~~~~~~ 112 (272)
+.+.... .-+.+|-.+.|++.+.
T Consensus 87 v~ea~~~--Gi~~vVi~t~G~~~~~ 109 (294)
T 2yv1_A 87 VFEAIDA--GIELIVVITEHIPVHD 109 (294)
T ss_dssp HHHHHHT--TCSEEEECCSCCCHHH
T ss_pred HHHHHHC--CCCEEEEECCCCCHHH
Confidence 8776543 2233454667887653
No 288
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.85 E-value=5.4e-05 Score=63.54 Aligned_cols=94 Identities=19% Similarity=0.215 Sum_probs=65.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c-----C--ceeec--CchhhhccCCEEEE
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I-----G--VKVLS--DNNAVVEYSDVVVF 77 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~-----g--~~~~~--~~~~~~~~aDivil 77 (272)
...+++.|+|+|-+|.+++..|.+.|. .+|+++ +|++++++.+.+ . + +.... +..+.+.++|+||-
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~---~~v~i~-~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVIn 200 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGV---QKLQVA-DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVN 200 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC---CEEEEE-ECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEE
Confidence 356789999999999999999999987 259999 999999887755 1 2 22322 45566788999999
Q ss_pred eeCcccHHHHHHHh-chhcCCCCEEEEEc
Q 024121 78 SVKPQVVKDVAMQI-RPLLSRKKLLVSVA 105 (272)
Q Consensus 78 ~v~~~~~~~v~~~l-~~~l~~~~~iis~~ 105 (272)
|+|.......-..+ ...++++.+++|+.
T Consensus 201 aTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv 229 (283)
T 3jyo_A 201 ATPMGMPAHPGTAFDVSCLTKDHWVGDVV 229 (283)
T ss_dssp CSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred CCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence 99753211100001 12356777777764
No 289
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.83 E-value=9.7e-05 Score=63.47 Aligned_cols=92 Identities=17% Similarity=0.151 Sum_probs=60.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHH----cC------------c-------eee--
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFES----IG------------V-------KVL-- 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r--~~~~~~~l~~----~g------------~-------~~~-- 62 (272)
++||||+|+|.+|..+++.|.++.. -+|...+++ +++.+..+.+ .| + .+.
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~---vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGK---VDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQE 79 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS---SEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCC---cEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEec
Confidence 4699999999999999999887532 266554375 6777666654 11 0 111
Q ss_pred cCchhh-h--ccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCC
Q 024121 63 SDNNAV-V--EYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 63 ~~~~~~-~--~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
.+++++ . .++|+||.|+|.....+..... +..|..+|+++++
T Consensus 80 ~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~---l~aGak~V~iSap 124 (335)
T 1u8f_O 80 RDPSKIKWGDAGAEYVVESTGVFTTMEKAGAH---LQGGAKRVIISAP 124 (335)
T ss_dssp SSGGGCCTTTTTCCEEEECSSSCCSHHHHGGG---GGGTCSEEEESSC
T ss_pred CCHHHCccccCCCCEEEECCCchhhHHHHHHH---HhCCCeEEEeccC
Confidence 244443 1 4799999999988777666543 4456555656554
No 290
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.83 E-value=4.2e-06 Score=67.14 Aligned_cols=80 Identities=10% Similarity=0.089 Sum_probs=55.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHh-CCCCCCCcEEEEeCCCHHHHHHHHHcCce--eecCchhhhc-cCCEEEEeeCcccH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAK-SGVLPPDRICTAVHSNLKRRDAFESIGVK--VLSDNNAVVE-YSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~-~g~~~~~~V~v~~~r~~~~~~~l~~~g~~--~~~~~~~~~~-~aDivil~v~~~~~ 84 (272)
+.++++|||+|++|..+++.+.. .|+ ++..+.|.++++..... .|+. ..++..+.++ +.|+|++|+|....
T Consensus 79 ~~~rV~IIGaG~~G~~la~~~~~~~g~----~iVg~~D~dp~k~g~~i-~gv~V~~~~dl~ell~~~ID~ViIA~Ps~~~ 153 (211)
T 2dt5_A 79 RKWGLCIVGMGRLGSALADYPGFGESF----ELRGFFDVDPEKVGRPV-RGGVIEHVDLLPQRVPGRIEIALLTVPREAA 153 (211)
T ss_dssp SCEEEEEECCSHHHHHHHHCSCCCSSE----EEEEEEESCTTTTTCEE-TTEEEEEGGGHHHHSTTTCCEEEECSCHHHH
T ss_pred CCCEEEEECccHHHHHHHHhHhhcCCc----EEEEEEeCCHHHHhhhh-cCCeeecHHhHHHHHHcCCCEEEEeCCchhH
Confidence 34689999999999999985322 255 66544398887654322 2333 3456666665 58999999998877
Q ss_pred HHHHHHhch
Q 024121 85 KDVAMQIRP 93 (272)
Q Consensus 85 ~~v~~~l~~ 93 (272)
.++.+.+..
T Consensus 154 ~ei~~~l~~ 162 (211)
T 2dt5_A 154 QKAADLLVA 162 (211)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776653
No 291
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.81 E-value=0.00017 Score=59.06 Aligned_cols=82 Identities=18% Similarity=0.300 Sum_probs=56.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhc-cCCEEEEeeCcccHHHH
Q 024121 11 FILGFIGA-GKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE-YSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~-~aDivil~v~~~~~~~v 87 (272)
|||+|+|+ |.||+.++..+.+. ++ ++....+++ .+.++++. ++|+||-+++|+.+.+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~----elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p~a~~~~ 61 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDL----TLSAELDAG---------------DPLSLLTDGNTEVVIDFTHPDVVMGN 61 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTC----EEEEEECTT---------------CCTHHHHHTTCCEEEECSCTTTHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC----EEEEEEccC---------------CCHHHHhccCCcEEEEccChHHHHHH
Confidence 58999996 99999999998765 77 776442664 23444443 78999988888887777
Q ss_pred HHHhchhcCCCCEEEEEcCCCCHHHHH
Q 024121 88 AMQIRPLLSRKKLLVSVAAGVKLKDLQ 114 (272)
Q Consensus 88 ~~~l~~~l~~~~~iis~~~~~~~~~l~ 114 (272)
+.... ..+.-+|..+.|.+.+..+
T Consensus 62 ~~~a~---~~g~~~VigTTG~~~e~~~ 85 (245)
T 1p9l_A 62 LEFLI---DNGIHAVVGTTGFTAERFQ 85 (245)
T ss_dssp HHHHH---HTTCEEEECCCCCCHHHHH
T ss_pred HHHHH---HcCCCEEEcCCCCCHHHHH
Confidence 65543 3445455445677766443
No 292
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.80 E-value=0.00013 Score=60.87 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=53.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cCchhh-hccCCEEEEeeC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDNNAV-VEYSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~~~~~-~~~aDivil~v~ 80 (272)
++|||.|.|+|.+|+.+++.|.+.|+ +|++. +|++++...+...++... .|..+. +.++|+||-+..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~ 72 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGW----RIIGT-SRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTA 72 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTC----EEEEE-ESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCC----EEEEE-EcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCC
Confidence 35899999999999999999999999 99999 999988877776666532 222111 678999999874
No 293
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.79 E-value=3.3e-05 Score=66.73 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=58.6
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cC---ceeecCchhhhccCCEEEEe
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IG---VKVLSDNNAVVEYSDVVVFS 78 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-----~g---~~~~~~~~~~~~~aDivil~ 78 (272)
++++||+|+| +|.+|..+.+.|.++.. .++... .+..+.-+++.. .| +.+ .+..+ +.++|+||+|
T Consensus 2 ~~~~kV~IiGAtG~iG~~llr~L~~~p~---~elv~v-~s~~~~g~~~~~~~~~~~g~~~~~~-~~~~~-~~~vDvV~~a 75 (345)
T 2ozp_A 2 TGKKTLSIVGASGYAGGEFLRLALSHPY---LEVKQV-TSRRFAGEPVHFVHPNLRGRTNLKF-VPPEK-LEPADILVLA 75 (345)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHTCTT---EEEEEE-BCSTTTTSBGGGTCGGGTTTCCCBC-BCGGG-CCCCSEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHcCCC---cEEEEE-ECchhhCchhHHhCchhcCcccccc-cchhH-hcCCCEEEEc
Confidence 4468999999 69999999999987643 266555 332222111211 11 122 22233 4789999999
Q ss_pred eCcccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 79 VKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 79 v~~~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
+|.....+....+. ..|..+|+.++..
T Consensus 76 ~g~~~s~~~a~~~~---~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 76 LPHGVFAREFDRYS---ALAPVLVDLSADF 102 (345)
T ss_dssp CCTTHHHHTHHHHH---TTCSEEEECSSTT
T ss_pred CCcHHHHHHHHHHH---HCCCEEEEcCccc
Confidence 99887777665543 4677899887654
No 294
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.78 E-value=3.3e-05 Score=64.69 Aligned_cols=92 Identities=11% Similarity=0.117 Sum_probs=62.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEeeCcccHHH
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v~~~~~~~ 86 (272)
...+++.|+|+|.+|.+++..|.+.|. .+|+++ +|++++++.+.+ .+.....+..+ + ++|+||-|+|......
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~---~~v~v~-nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~ 193 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFA---KDIYVV-TRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPK 193 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTC---SEEEEE-ESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTS
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCC---CEEEEE-eCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCC
Confidence 356899999999999999999999986 379999 999999888865 22221222333 4 8999999997532111
Q ss_pred H--HHHhchhcCCCCEEEEEc
Q 024121 87 V--AMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 87 v--~~~l~~~l~~~~~iis~~ 105 (272)
. ..--...++++.+++|+.
T Consensus 194 ~~~~pi~~~~l~~~~~v~Dlv 214 (282)
T 3fbt_A 194 EGESPVDKEVVAKFSSAVDLI 214 (282)
T ss_dssp TTCCSSCHHHHTTCSEEEESC
T ss_pred CccCCCCHHHcCCCCEEEEEe
Confidence 0 000012246777888764
No 295
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.75 E-value=0.00012 Score=63.06 Aligned_cols=88 Identities=14% Similarity=0.128 Sum_probs=56.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHH-c--------------------CceeecCchh
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFES-I--------------------GVKVLSDNNA 67 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g-~~~~~~V~v~~~r~~~~~~~l~~-~--------------------g~~~~~~~~~ 67 (272)
++||||+|+|.+|+.+++.|.+.. + +|...++++++....+.+ . ++.+..+..+
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~----evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~ 77 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDM----EVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILD 77 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSE----EEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCc----eEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHH
Confidence 369999999999999999988763 4 655443655544433333 2 2222223445
Q ss_pred hhccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEE
Q 024121 68 VVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVS 103 (272)
Q Consensus 68 ~~~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis 103 (272)
...++|+||.|+|.....+..+ ..+++.|+.||+
T Consensus 78 ~~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~ 111 (343)
T 2yyy_A 78 IIEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAIL 111 (343)
T ss_dssp TGGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEE
T ss_pred hccCCCEEEECCCccccHHHHH--HHHHHCCCEEEE
Confidence 5568999999998776555543 234556676664
No 296
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.74 E-value=0.00022 Score=60.59 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=61.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHH---HHHHHHHc--Cceee----cCchhhhccCCEEEEee
Q 024121 11 FILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTAVHSNLK---RRDAFESI--GVKVL----SDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~---~~~~l~~~--g~~~~----~~~~~~~~~aDivil~v 79 (272)
|||+||| +|.+|.+++..|... ++ ..++.++ |+++. .+.++... ...+. .+..+.+++||+||++.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~--~~el~L~-Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~a 77 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPS--GSELSLY-DIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISA 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT--TEEEEEE-CSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC--CceEEEE-ecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeC
Confidence 7999999 899999999999875 54 2389999 98861 12233332 22332 24567789999999997
Q ss_pred --C--cc-c-----------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 80 --K--PQ-V-----------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 80 --~--~~-~-----------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
| |. . ++++.+.+..+ .|+.+++..+++..
T Consensus 78 g~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd 122 (312)
T 3hhp_A 78 GVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNPVN 122 (312)
T ss_dssp SCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSCHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCcch
Confidence 2 21 1 22333445554 47777777766554
No 297
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.74 E-value=0.00011 Score=62.06 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=66.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhc--c-CCEEEEeeCcccHHH
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE--Y-SDVVVFSVKPQVVKD 86 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~-aDivil~v~~~~~~~ 86 (272)
.++.|+|+ |+||+.+.+++.+.|+ + .++ ..+|.+... .-.|+.+..+..++.+ . .|++++++|++.+.+
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~----~-~v~-~VnP~~~g~-~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~ 86 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGT----K-VVA-GVTPGKGGS-EVHGVPVYDSVKEALAEHPEINTSIVFVPAPFAPD 86 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC----E-EEE-EECTTCTTC-EETTEEEESSHHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCC----c-EEE-EeCCCCCCc-eECCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHH
Confidence 46888898 9999999999999998 6 333 333432100 0158888888888876 5 999999999999998
Q ss_pred HHHHhchhcCCCCEEEEEcCCCCHHH
Q 024121 87 VAMQIRPLLSRKKLLVSVAAGVKLKD 112 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~~~~~~~ 112 (272)
++.+.... .-+.+|-.+.|++.++
T Consensus 87 ~v~ea~~~--Gi~~vVi~t~G~~~~~ 110 (297)
T 2yv2_A 87 AVYEAVDA--GIRLVVVITEGIPVHD 110 (297)
T ss_dssp HHHHHHHT--TCSEEEECCCCCCHHH
T ss_pred HHHHHHHC--CCCEEEEECCCCCHHH
Confidence 88876543 1233444567887643
No 298
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.74 E-value=2.1e-05 Score=67.78 Aligned_cols=97 Identities=13% Similarity=0.248 Sum_probs=58.3
Q ss_pred CCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHcCceeec-CchhhhccCCEEEEeeCccc
Q 024121 7 PAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESIGVKVLS-DNNAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 7 ~~~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-~~~~~l~~~g~~~~~-~~~~~~~~aDivil~v~~~~ 83 (272)
|++.|||+|+| +|.+|+.+.+.|.+.+| +..++...+++.. .+.-.+....+.+.+ +. +...++|+||.|+|...
T Consensus 3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~-~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~-~~~~~~DvV~~a~g~~~ 80 (340)
T 2hjs_A 3 MSQPLNVAVVGATGSVGEALVGLLDERDF-PLHRLHLLASAESAGQRMGFAESSLRVGDVDS-FDFSSVGLAFFAAAAEV 80 (340)
T ss_dssp --CCCCEEEETTTSHHHHHHHHHHHHTTC-CCSCEEEEECTTTTTCEEEETTEEEECEEGGG-CCGGGCSEEEECSCHHH
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEEecCCCCCCccccCCcceEEecCCH-HHhcCCCEEEEcCCcHH
Confidence 33457999999 79999999999987666 3335554424332 110001001112211 22 23578999999999877
Q ss_pred HHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
..+..+.+. ..|..+|+.++..
T Consensus 81 s~~~a~~~~---~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 81 SRAHAERAR---AAGCSVIDLSGAL 102 (340)
T ss_dssp HHHHHHHHH---HTTCEEEETTCTT
T ss_pred HHHHHHHHH---HCCCEEEEeCCCC
Confidence 666666543 3566788776544
No 299
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.73 E-value=3e-05 Score=63.09 Aligned_cols=72 Identities=8% Similarity=0.111 Sum_probs=51.6
Q ss_pred CCCCCeEEEEc-ccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHHcCceee-------cCchhhhccCCEEEE
Q 024121 7 PAESFILGFIG-AGKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFESIGVKVL-------SDNNAVVEYSDVVVF 77 (272)
Q Consensus 7 ~~~~~~IgiIG-~G~mG~~la~~l~~~g-~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-------~~~~~~~~~aDivil 77 (272)
.+++++|.|.| +|.+|.++++.|++.| + +|.+. +|++++.+.+...++... .+..++++++|+||.
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~----~V~~~-~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~ 94 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTI----KQTLF-ARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYA 94 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTE----EEEEE-ESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCc----eEEEE-EcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 34567899998 6999999999999999 8 99999 999877654433343321 122345778999998
Q ss_pred eeCccc
Q 024121 78 SVKPQV 83 (272)
Q Consensus 78 ~v~~~~ 83 (272)
+.....
T Consensus 95 ~a~~~~ 100 (236)
T 3qvo_A 95 NLTGED 100 (236)
T ss_dssp ECCSTT
T ss_pred cCCCCc
Confidence 875543
No 300
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.73 E-value=1.7e-05 Score=67.98 Aligned_cols=88 Identities=14% Similarity=0.169 Sum_probs=57.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCC-CC----CCcE-EEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGV-LP----PDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~-~~----~~~V-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~ 82 (272)
+.+||||||+|.||+.+++.+.+... +. .-+| .++ +|++++.+.+. ....++|.++++ +.|+|+.|++..
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~-d~~~~~~~~~~--~~~~~~d~~~ll-~iDvVve~t~~~ 77 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVL-VRDPRKPRAIP--QELLRAEPFDLL-EADLVVEAMGGV 77 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEE-CSCTTSCCSSC--GGGEESSCCCCT-TCSEEEECCCCS
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEE-ECCHHHhhccC--cccccCCHHHHh-CCCEEEECCCCc
Confidence 45799999999999999999887530 00 0144 456 88876543221 123456778878 999999999876
Q ss_pred c-HHHHHHHhchhcCCCCEEEE
Q 024121 83 V-VKDVAMQIRPLLSRKKLLVS 103 (272)
Q Consensus 83 ~-~~~v~~~l~~~l~~~~~iis 103 (272)
. ..+...+ .+..|+-|++
T Consensus 78 ~~a~~~~~~---AL~aGKhVVt 96 (332)
T 2ejw_A 78 EAPLRLVLP---ALEAGIPLIT 96 (332)
T ss_dssp HHHHHHHHH---HHHTTCCEEE
T ss_pred HHHHHHHHH---HHHcCCeEEE
Confidence 3 3444433 2446677775
No 301
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.73 E-value=3.3e-05 Score=66.77 Aligned_cols=145 Identities=12% Similarity=0.073 Sum_probs=84.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCC-----CCCCCcEEEEeCC-CHHH-HHH----HHH-cCceeecCchhhhccCCEE
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSG-----VLPPDRICTAVHS-NLKR-RDA----FES-IGVKVLSDNNAVVEYSDVV 75 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g-----~~~~~~V~v~~~r-~~~~-~~~----l~~-~g~~~~~~~~~~~~~aDiv 75 (272)
+++||+|+| +|.+|+.+.+.|.+++ + .++....++ +..+ ... +.. ..+.+.+...+.+.++|+|
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~---~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvV 84 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGR---LRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAV 84 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTS---EEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCcc---EEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEE
Confidence 457999999 8999999999999876 3 256655233 3222 211 111 1222222123345689999
Q ss_pred EEeeCcccHHHHHHHhchhcCCCCEEEEEcCCCCH---HHHHHHhCC-CC--EEEEccCc---hhhhcCCceEEEeCCCC
Q 024121 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTGH-SR--FIRVMPNT---PSAVGEAATVMSLGGTA 146 (272)
Q Consensus 76 il~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~~~---~~l~~~~~~-~~--~~~~~p~~---~~~~~~g~~~~~~~~~~ 146 (272)
|+|++.....++.+.+ ..|..+|+.++.... +..+++.+. .. ++-..|-. +..+... .++. ++++
T Consensus 85 f~alg~~~s~~~~~~~----~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~~~i~~~-~iIa-nPgC 158 (352)
T 2nqt_A 85 FLALPHGHSAVLAQQL----SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGARDQLRGT-RRIA-VPGC 158 (352)
T ss_dssp EECCTTSCCHHHHHHS----CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHHHHHTTC-SEEE-CCCH
T ss_pred EECCCCcchHHHHHHH----hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCHHHHhcC-CEEE-cCCH
Confidence 9999988877777665 356789998776542 445667651 12 23333433 3333332 2333 3434
Q ss_pred CHH-HHHHHHHHhhhcC
Q 024121 147 TEE-DGELIGKLFGSVG 162 (272)
Q Consensus 147 ~~~-~~~~v~~ll~~~G 162 (272)
... ..-.+.++.+..+
T Consensus 159 ~tt~~~lal~PL~~~~~ 175 (352)
T 2nqt_A 159 YPTAALLALFPALAADL 175 (352)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 333 3456788887766
No 302
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.73 E-value=1e-05 Score=64.63 Aligned_cols=79 Identities=15% Similarity=0.182 Sum_probs=55.0
Q ss_pred CCeEEEEcccHHHHHHHHHH--HhCCCCCCCcEEEEeCCCHH-HHHH-HHHcCceee--cCchhhhc--cCCEEEEeeCc
Q 024121 10 SFILGFIGAGKMAESIAKGV--AKSGVLPPDRICTAVHSNLK-RRDA-FESIGVKVL--SDNNAVVE--YSDVVVFSVKP 81 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l--~~~g~~~~~~V~v~~~r~~~-~~~~-l~~~g~~~~--~~~~~~~~--~aDivil~v~~ 81 (272)
..+++|+|+|++|.++++.+ .+.|+ ++..+.|.+++ +... .. .|+.+. ++..+.++ +.|++++|+|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~----~iVg~~D~dp~~kiG~~~i-~GvpV~~~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKM----QISMAFDLDSNDLVGKTTE-DGIPVYGISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSE----EEEEEEECTTSTTTTCBCT-TCCBEEEGGGHHHHC-CCSCCEEEECSCG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCe----EEEEEEeCCchhccCceeE-CCeEEeCHHHHHHHHHHcCCCEEEEecCc
Confidence 45899999999999999874 34455 65543398887 5432 11 355543 45556665 58999999999
Q ss_pred ccHHHHHHHhch
Q 024121 82 QVVKDVAMQIRP 93 (272)
Q Consensus 82 ~~~~~v~~~l~~ 93 (272)
....++.+.+..
T Consensus 159 ~~aq~v~d~lv~ 170 (212)
T 3keo_A 159 TEAQEVADILVK 170 (212)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 888888877654
No 303
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.72 E-value=9.1e-05 Score=60.99 Aligned_cols=78 Identities=12% Similarity=0.143 Sum_probs=54.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHHHHH------cCceee--
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDAFES------IGVKVL-- 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-------------------~~~~~l~~------~g~~~~-- 62 (272)
..+|.|||+|.+|+.++..|...|. .+|+++ |++. .|++.+++ .++.+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv---~~i~lv-D~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV---GNLTLL-DFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-CCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC---CeEEEE-cCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 3689999999999999999999996 378999 9886 55554433 133321
Q ss_pred c------CchhhhccCCEEEEeeCcccHHHHHHHh
Q 024121 63 S------DNNAVVEYSDVVVFSVKPQVVKDVAMQI 91 (272)
Q Consensus 63 ~------~~~~~~~~aDivil~v~~~~~~~v~~~l 91 (272)
. +..+.+.++|+||.|++....+..+...
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred eccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 1 1234567889999998665555444443
No 304
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.71 E-value=0.00018 Score=61.66 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=64.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCC---CCCcEEEEeCCC----HHHHHH----HHHc------CceeecCchhhhc
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVL---PPDRICTAVHSN----LKRRDA----FESI------GVKVLSDNNAVVE 70 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~---~~~~V~v~~~r~----~~~~~~----l~~~------g~~~~~~~~~~~~ 70 (272)
+.|||+|+|+ |.+|++++..|...|+. ...+|.++ |++ +++++. +... .+....+..++++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~-Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLL-EIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE-CCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEE-cCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 3579999997 99999999999988752 12378899 998 554432 3321 1233456677889
Q ss_pred cCCEEEEeeC--c--c-c-----------HHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 71 YSDVVVFSVK--P--Q-V-----------VKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 71 ~aDivil~v~--~--~-~-----------~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
++|+||++.. . . . +.++++.+..+-.++..++..++++
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 9999999862 1 1 1 2334445555423666777666644
No 305
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.70 E-value=4.1e-05 Score=55.79 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=71.2
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 10 SFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 10 ~~~IgiIG~----G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
.++|++||+ +..|..+.++|.+.|| +|+-. |...+.. .|.....+..++-. .|++++++|++.+.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~----~V~pV-nP~~~~i-----~G~~~y~sl~dlp~-vDlavi~~p~~~v~ 72 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGH----EFIPV-GRKKGEV-----LGKTIINERPVIEG-VDTVTLYINPQNQL 72 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTC----CEEEE-SSSCSEE-----TTEECBCSCCCCTT-CCEEEECSCHHHHG
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCC----eEEEE-CCCCCcC-----CCeeccCChHHCCC-CCEEEEEeCHHHHH
Confidence 467999998 7899999999999999 99988 7653222 57777788888767 99999999999999
Q ss_pred HHHHHhchhcCCCCEEEEEcCCCCHHHHHHHh
Q 024121 86 DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~ 117 (272)
++++++... ....+| +++|...+++.+..
T Consensus 73 ~~v~e~~~~-g~k~v~--~~~G~~~~e~~~~a 101 (122)
T 3ff4_A 73 SEYNYILSL-KPKRVI--FNPGTENEELEEIL 101 (122)
T ss_dssp GGHHHHHHH-CCSEEE--ECTTCCCHHHHHHH
T ss_pred HHHHHHHhc-CCCEEE--ECCCCChHHHHHHH
Confidence 888886653 233333 56777655555444
No 306
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.67 E-value=0.0003 Score=63.29 Aligned_cols=68 Identities=16% Similarity=0.271 Sum_probs=47.0
Q ss_pred CeEEEEcccHHHHH--HHHHHHhCCCCC--CCcEEEEeCCCHHHHHHHH-------H-cC----ceeecCchhhhccCCE
Q 024121 11 FILGFIGAGKMAES--IAKGVAKSGVLP--PDRICTAVHSNLKRRDAFE-------S-IG----VKVLSDNNAVVEYSDV 74 (272)
Q Consensus 11 ~~IgiIG~G~mG~~--la~~l~~~g~~~--~~~V~v~~~r~~~~~~~l~-------~-~g----~~~~~~~~~~~~~aDi 74 (272)
|||+|||.|..|.+ +...+.....++ ..+|+++ |.++++++... + .| +..+.|..+++++||+
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~-Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~ 79 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLM-DVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADF 79 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEE-CSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEE-CCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCE
Confidence 79999999998755 344454432221 2479999 99998765321 1 22 3446677899999999
Q ss_pred EEEee
Q 024121 75 VVFSV 79 (272)
Q Consensus 75 vil~v 79 (272)
||++.
T Consensus 80 Vi~~~ 84 (477)
T 3u95_A 80 IINTA 84 (477)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 99986
No 307
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.63 E-value=9.1e-05 Score=64.09 Aligned_cols=93 Identities=17% Similarity=0.285 Sum_probs=57.8
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--------------cCceeec-Cchhhhcc
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--------------IGVKVLS-DNNAVVEY 71 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~--------------~g~~~~~-~~~~~~~~ 71 (272)
++++||+|+| +|.+|..+.+.|.+... .++...++.....-+.+.+ ..+.+.+ +.++ +.+
T Consensus 2 ~~~~kV~IiGAtG~iG~~llr~L~~~p~---~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~ 77 (350)
T 2ep5_A 2 ADKIKVSLLGSTGMVGQKMVKMLAKHPY---LELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKD 77 (350)
T ss_dssp CCCEEEEEESCSSHHHHHHHHHHTTCSS---EEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTT
T ss_pred CCCcEEEEECcCCHHHHHHHHHHHhCCC---cEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcC
Confidence 4568999999 79999999998876532 2666552222111111211 1122222 3333 478
Q ss_pred CCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCC
Q 024121 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 72 aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
+|+||+|+|.....+...... ..|..|||.++.
T Consensus 78 vDvVf~atp~~~s~~~a~~~~---~aG~~VId~s~~ 110 (350)
T 2ep5_A 78 VDVVLSALPNELAESIELELV---KNGKIVVSNASP 110 (350)
T ss_dssp CSEEEECCCHHHHHHHHHHHH---HTTCEEEECSST
T ss_pred CCEEEECCChHHHHHHHHHHH---HCCCEEEECCcc
Confidence 999999999887766666543 456778987654
No 308
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.63 E-value=9e-05 Score=63.35 Aligned_cols=94 Identities=11% Similarity=0.046 Sum_probs=57.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-----CCCCCCcEE-EEeCCCHHH---------HH-HHHHcC-cee-ecCchhhh
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKS-----GVLPPDRIC-TAVHSNLKR---------RD-AFESIG-VKV-LSDNNAVV 69 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~-----g~~~~~~V~-v~~~r~~~~---------~~-~l~~~g-~~~-~~~~~~~~ 69 (272)
|+..||+|||+|.||+.+++.|.+. |. .-+|. ++ +++++. .. ...+.| +.. ..+..+.+
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~--~l~lvaVa-d~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l 78 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAF--SIKVVGVS-DSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDL 78 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--C--EEEEEEEE-CSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGG
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCC--CEEEEEEE-ecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHh
Confidence 5668999999999999999999874 22 01444 44 776532 11 122233 211 11556666
Q ss_pred c--cCCEEEEeeCccc-HHHHHHHhchhcCCCCEEEEE
Q 024121 70 E--YSDVVVFSVKPQV-VKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 70 ~--~aDivil~v~~~~-~~~v~~~l~~~l~~~~~iis~ 104 (272)
. +.|+|+.|+|+.. .+...+.+...+..|+-||+.
T Consensus 79 ~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 79 MGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp TTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 4 5899999998753 343344444456678888864
No 309
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.63 E-value=0.00043 Score=61.20 Aligned_cols=112 Identities=17% Similarity=0.268 Sum_probs=70.0
Q ss_pred CCeEEEEcccHH-HHHHHHHHHh--CCCCCCCcEEEEeCCCHHHHHHHHH-------cCcee--ecCchhhhccCCEEEE
Q 024121 10 SFILGFIGAGKM-AESIAKGVAK--SGVLPPDRICTAVHSNLKRRDAFES-------IGVKV--LSDNNAVVEYSDVVVF 77 (272)
Q Consensus 10 ~~~IgiIG~G~m-G~~la~~l~~--~g~~~~~~V~v~~~r~~~~~~~l~~-------~g~~~--~~~~~~~~~~aDivil 77 (272)
.+||+|||+|.. +..+...|.. .+. +..+|.++ |.++++++.... ...++ +.|..+++++||+||+
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l-~~~el~L~-Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Vii 79 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDV-RIDEVIFY-DIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIF 79 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTS-CCCEEEEE-CSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCC-CcCEEEEE-eCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEE
Confidence 479999999984 2222334455 332 34489999 999987654222 11333 3455678999999999
Q ss_pred eeCcc------------------------------------cHHHHHHHhchhcCCCCEEEEEcCCCCH--HHHHHHhCC
Q 024121 78 SVKPQ------------------------------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTGH 119 (272)
Q Consensus 78 ~v~~~------------------------------------~~~~v~~~l~~~l~~~~~iis~~~~~~~--~~l~~~~~~ 119 (272)
+.-.. .+.++++.+..+ . +..++..+|++.. ..+.+..+.
T Consensus 80 tagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~-~-~A~lin~TNPvdi~t~a~~k~~p~ 157 (417)
T 1up7_A 80 QFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKT-S-NATIVNFTNPSGHITEFVRNYLEY 157 (417)
T ss_dssp CCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHT-T-CCEEEECSSSHHHHHHHHHHTTCC
T ss_pred cCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHH-C-CEEEEEeCChHHHHHHHHHHhCCC
Confidence 98221 134555666665 4 7788888887654 334444454
Q ss_pred CCEEEE
Q 024121 120 SRFIRV 125 (272)
Q Consensus 120 ~~~~~~ 125 (272)
.++++.
T Consensus 158 ~rviG~ 163 (417)
T 1up7_A 158 EKFIGL 163 (417)
T ss_dssp SSEEEC
T ss_pred CCEEEe
Confidence 467764
No 310
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.61 E-value=0.00024 Score=57.57 Aligned_cols=68 Identities=19% Similarity=0.274 Sum_probs=55.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc-eee-----cCchhhhccCCEEEEeeC
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV-KVL-----SDNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~-~~~-----~~~~~~~~~aDivil~v~ 80 (272)
++.|+|.|.|+ |.+|+.+++.|++.|+ +|++. +|++++.+.+...++ ... .+..+.+.++|+||-+..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~----~V~~~-~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGH----EPVAM-VRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCC----eEEEE-ECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 45689999987 9999999999999999 99999 999998888776666 432 334566778999998874
No 311
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.60 E-value=9.9e-05 Score=63.38 Aligned_cols=93 Identities=16% Similarity=0.142 Sum_probs=61.0
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCC---H--HHHHHH----HHc-Cceeec--CchhhhccCCEEE
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSN---L--KRRDAF----ESI-GVKVLS--DNNAVVEYSDVVV 76 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~---~--~~~~~l----~~~-g~~~~~--~~~~~~~~aDivi 76 (272)
|+||+|+| +|.+|..+.+.|.++.. .++.....+. . ++.... ... ...+.. +..+..+++|+||
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~---~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf 80 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPH---MNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVF 80 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTT---EEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCC---CcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEE
Confidence 37999999 59999999998887432 2565441333 1 112211 111 233332 3444448999999
Q ss_pred EeeCcccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 77 l~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
+|+|.....+..+++. ..|..+||.++..
T Consensus 81 ~a~p~~~s~~~~~~~~---~~g~~vIDlSa~f 109 (337)
T 3dr3_A 81 LATAHEVSHDLAPQFL---EAGCVVFDLSGAF 109 (337)
T ss_dssp ECSCHHHHHHHHHHHH---HTTCEEEECSSTT
T ss_pred ECCChHHHHHHHHHHH---HCCCEEEEcCCcc
Confidence 9999888777776653 4678899988775
No 312
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.59 E-value=0.00016 Score=57.97 Aligned_cols=66 Identities=20% Similarity=0.251 Sum_probs=50.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHH-hCCCCCCCcEEEEeCCCHH-HHHHHHH--cCceee-------cCchhhhccCCEEEEe
Q 024121 11 FILGFIG-AGKMAESIAKGVA-KSGVLPPDRICTAVHSNLK-RRDAFES--IGVKVL-------SDNNAVVEYSDVVVFS 78 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~-~~g~~~~~~V~v~~~r~~~-~~~~l~~--~g~~~~-------~~~~~~~~~aDivil~ 78 (272)
++|.|.| +|.+|.++++.|+ +.|+ +|++. +|+++ +.+.+.. .++... .+..++++++|+||.+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ 80 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM----HITLY-GRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVG 80 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC----EEEEE-ESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEES
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc----eEEEE-ecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEc
Confidence 4599998 5999999999999 8999 99999 99998 7777642 333321 1224567789999999
Q ss_pred eCc
Q 024121 79 VKP 81 (272)
Q Consensus 79 v~~ 81 (272)
...
T Consensus 81 ag~ 83 (221)
T 3r6d_A 81 AME 83 (221)
T ss_dssp CCC
T ss_pred CCC
Confidence 854
No 313
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.58 E-value=0.0002 Score=61.32 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=53.2
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHHHcCceee--cCchhhh-ccCCEEEEe--eC
Q 024121 9 ESFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNL--KRRDAFESIGVKVL--SDNNAVV-EYSDVVVFS--VK 80 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~-la~~l~~~g~~~~~~V~v~~~r~~--~~~~~l~~~g~~~~--~~~~~~~-~~aDivil~--v~ 80 (272)
.++||.|||.|.+|.+ +|+.|.+.|+ +|+++ |+++ ...+.|.+.|+.+. .+.+++. .++|+||++ +|
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~----~V~~~-D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~ 77 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGF----EVSGC-DAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAK 77 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTC----EEEEE-ESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCC----EEEEE-cCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcC
Confidence 3578999999999995 9999999999 99999 8764 34567777888765 2344444 479999987 45
Q ss_pred cc
Q 024121 81 PQ 82 (272)
Q Consensus 81 ~~ 82 (272)
++
T Consensus 78 ~~ 79 (326)
T 3eag_A 78 RG 79 (326)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 314
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.57 E-value=4.3e-05 Score=64.87 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=62.7
Q ss_pred CCCCCCCeEEEEcccHH-HHHHHHHHHhCCCCCCCcEEEEeCCCHHHH----HHHHHcCcee-----e--cCchhhhccC
Q 024121 5 PIPAESFILGFIGAGKM-AESIAKGVAKSGVLPPDRICTAVHSNLKRR----DAFESIGVKV-----L--SDNNAVVEYS 72 (272)
Q Consensus 5 ~~~~~~~~IgiIG~G~m-G~~la~~l~~~g~~~~~~V~v~~~r~~~~~----~~l~~~g~~~-----~--~~~~~~~~~a 72 (272)
......+++.|||.|.| |..+++.|...|. .|+++ +|+..+. +.+...-... + .+..+.+.++
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gA----tVtv~-nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGA----TVYSV-DVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSC----EEEEE-CSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCC----EEEEE-eCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC
Confidence 33456789999999986 9999999999998 99999 9984322 2221100111 1 4567888999
Q ss_pred CEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcC
Q 024121 73 DVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 73 Divil~v~~~~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
|+||.+++.... ++. ...++++.++|++..
T Consensus 247 DIVIsAtg~p~~--vI~--~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KFP--TEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CBC--TTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--eeC--HHHcCCCeEEEEcCC
Confidence 999999964321 011 123578888888744
No 315
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.55 E-value=4.2e-05 Score=65.83 Aligned_cols=96 Identities=13% Similarity=0.181 Sum_probs=59.0
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCC-HHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHH
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSN-LKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~-~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~ 86 (272)
+++||+|+| +|.+|..+.+.|.++++ +..++...+++. ..+.-.+....+.+.....+...++|+||.|+|.....+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~-p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~s~~ 80 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREF-PVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSAK 80 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHHHHH
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCC-CCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchHHHH
Confidence 458999999 89999999999988743 222566552432 211000111112222111223568999999999887666
Q ss_pred HHHHhchhcCCCCEEEEEcCCC
Q 024121 87 VAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~~~ 108 (272)
..+.+. ..|..+|+.++..
T Consensus 81 ~a~~~~---~~G~~vId~s~~~ 99 (336)
T 2r00_A 81 WAPIAA---EAGVVVIDNTSHF 99 (336)
T ss_dssp HHHHHH---HTTCEEEECSSTT
T ss_pred HHHHHH---HcCCEEEEcCCcc
Confidence 665543 4677889876653
No 316
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.55 E-value=0.00013 Score=62.58 Aligned_cols=90 Identities=11% Similarity=0.073 Sum_probs=57.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCC--------CCCCCcE-EEEeCCCHHHHHH------HH----HcCce-eec---
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSG--------VLPPDRI-CTAVHSNLKRRDA------FE----SIGVK-VLS--- 63 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g--------~~~~~~V-~v~~~r~~~~~~~------l~----~~g~~-~~~--- 63 (272)
||+.+||||||+|.||+.++..|.+.. + +| .++ +|++++.+. +. ..++. .++
T Consensus 3 mM~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~----~vvaV~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (331)
T 3c8m_A 3 AMKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKF----NVVFVA-DSLHSYYNERIDIGKVISYKEKGSLDSLEYESI 77 (331)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEE----EEEEEE-CSSCEEECTTCCHHHHHHHHHTTCGGGCCSEEC
T ss_pred CCcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcE----EEEEEE-ECChHHhhcccChHHHhhhhccCCcccccCCCC
Confidence 345689999999999999999887642 3 55 456 888754432 11 12332 333
Q ss_pred Cchhhh-ccCCEEEEeeCcc----cHHHHHHHhchhcCCCCEEEEE
Q 024121 64 DNNAVV-EYSDVVVFSVKPQ----VVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 64 ~~~~~~-~~aDivil~v~~~----~~~~v~~~l~~~l~~~~~iis~ 104 (272)
|.++++ .+.|+|+.|+|+. ...+.+. ..+..|+-|++.
T Consensus 78 d~~~ll~~~iDvVv~~t~~~~~~~~~~~~~~---~AL~aGkhVvta 120 (331)
T 3c8m_A 78 SASEALARDFDIVVDATPASADGKKELAFYK---ETFENGKDVVTA 120 (331)
T ss_dssp CHHHHHHSSCSEEEECSCCCSSSHHHHHHHH---HHHHTTCEEEEC
T ss_pred CHHHHhCCCCCEEEECCCCCCccchHHHHHH---HHHHCCCeEEec
Confidence 667766 3689999999885 3333333 334577778754
No 317
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.54 E-value=0.00071 Score=54.03 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=51.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cCc----hhhhccCCEEEEeeC
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN----NAVVEYSDVVVFSVK 80 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~~----~~~~~~aDivil~v~ 80 (272)
|||.|.|+ |.+|+.+++.|++.|+ +|++. .|++++...+...++... .|. .+.+.++|+||-+..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH----EVLAV-VRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC----EEEEE-EecccccccccCCCceEEecccccccHhhcccCCEEEECCc
Confidence 68999987 9999999999999999 99999 999988776655555432 121 256778999999873
No 318
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.54 E-value=0.00021 Score=61.10 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=56.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC---------CCCCCCcEE-EEeCCCHHHHH-----H-HHH--cCceeec--Cchhhh
Q 024121 10 SFILGFIGAGKMAESIAKGVAKS---------GVLPPDRIC-TAVHSNLKRRD-----A-FES--IGVKVLS--DNNAVV 69 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~---------g~~~~~~V~-v~~~r~~~~~~-----~-l~~--~g~~~~~--~~~~~~ 69 (272)
++||+|||+|.||+.+++.|.+. +. +|. ++ +|++++.+ + +.. ....... |..+++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~----~lvaV~-d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll 76 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEF----KVTAVA-DSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVV 76 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCE----EEEEEE-CSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCE----EEEEEE-eCChHhccccCHHHHHhhhccCccccCCCCHHHHh
Confidence 57999999999999999999875 33 554 45 88754321 1 111 1123333 777777
Q ss_pred c--cCCEEEEeeCcccH-HHHHHHhchhcCCCCEEEEE
Q 024121 70 E--YSDVVVFSVKPQVV-KDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 70 ~--~aDivil~v~~~~~-~~v~~~l~~~l~~~~~iis~ 104 (272)
+ +.|+|+.|+|++.. .+..+.+...+..|+-|++.
T Consensus 77 ~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 77 RSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp HHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred cCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 5 58999999987642 11222233445678877754
No 319
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.53 E-value=0.00044 Score=55.72 Aligned_cols=129 Identities=16% Similarity=0.165 Sum_probs=78.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHc-CceeecC--chhhhccCCEEEEeeCcccH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESI-GVKVLSD--NNAVVEYSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-~~~~~l~~~-g~~~~~~--~~~~~~~aDivil~v~~~~~ 84 (272)
+.++|.|||.|.+|..-++.|++.|. +|+++ +++. +.++.+.+. ++..... ..+.+.++|+||.|+.+..+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA----~VtVv-ap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGA----AITVV-APTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCC----CEEEE-CSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-CCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHH
Confidence 35799999999999999999999998 99999 7654 345556553 3543211 13447899999999887777
Q ss_pred HHHHHHhchhcCCCCEEEEEcCCCCHHHHHHHhCCCCEEEEccCchhhhcCC-ceEEEeCCCCCHHHHHHHHHHhhh
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEA-ATVMSLGGTATEEDGELIGKLFGS 160 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~g-~~~~~~~~~~~~~~~~~v~~ll~~ 160 (272)
...+.... + ..+.|+.... . ..+.++ .|+.+..| +.+.....+.++.....++.-++.
T Consensus 105 N~~I~~~a---k-~gi~VNvvD~---p------~~~~f~-----~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~ 163 (223)
T 3dfz_A 105 NKFVKQHI---K-NDQLVNMASS---F------SDGNIQ-----IPAQFSRGRLSLAISTDGASPLLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHS---C-TTCEEEC--------------CCSEE-----CCEEEEETTEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHH---h-CCCEEEEeCC---c------ccCeEE-----EeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 66665554 2 3355544221 0 012222 12222222 333233334567777777776654
No 320
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.52 E-value=0.00062 Score=54.18 Aligned_cols=64 Identities=20% Similarity=0.277 Sum_probs=50.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cCc----hhhhccCCEEEEeeC
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN----NAVVEYSDVVVFSVK 80 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~~----~~~~~~aDivil~v~ 80 (272)
|||.|+|. |.+|+.+++.|++.|+ +|++. +|++++.+.+. .++... .|. .+.+.++|+||-+..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH----EVTAI-VRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYG 70 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC----EEEEE-EcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCc
Confidence 68999995 9999999999999999 99999 99988877664 444321 121 256778999999873
No 321
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.52 E-value=0.00045 Score=59.59 Aligned_cols=90 Identities=19% Similarity=0.247 Sum_probs=63.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhc-cCCEEEEeeCcccH-
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE-YSDVVVFSVKPQVV- 84 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~-~aDivil~v~~~~~- 84 (272)
....++++|+|+|++|...++.+...|. +|.++ |+++++.+...+.+++.. +..+++. +||+++-|-....+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~Ga----kVvvs-D~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGA----QLLVA-DTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-eCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcC
Confidence 3467899999999999999999999998 99999 999876333333676654 4566666 89999876433333
Q ss_pred HHHHHHhchhcCCCCEEEEEcCC
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAAG 107 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~~ 107 (272)
.+-+.. ++ .++|+...++
T Consensus 246 ~~~~~~----lk-~~iVie~AN~ 263 (355)
T 1c1d_A 246 TEVART----LD-CSVVAGAANN 263 (355)
T ss_dssp HHHHHH----CC-CSEECCSCTT
T ss_pred HHHHhh----CC-CCEEEECCCC
Confidence 233333 33 4677766554
No 322
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.50 E-value=0.00024 Score=61.61 Aligned_cols=94 Identities=7% Similarity=0.073 Sum_probs=59.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHH-----------HcCceeecCchhhhccCCE
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL--KRRDAFE-----------SIGVKVLSDNNAVVEYSDV 74 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~--~~~~~l~-----------~~g~~~~~~~~~~~~~aDi 74 (272)
+++||+||| +|..|.-+.+.|.++.+ .++.....++. ++....- .....+.....+.+.++|+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~---~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDv 82 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPY---IKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDI 82 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSS---EEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCC---ceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCE
Confidence 457999999 69999999997766432 25543324433 1222210 0122222212233579999
Q ss_pred EEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 75 vil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
||+|+|.....+....+. ..|..+||.++..
T Consensus 83 vf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 83 IFSPLPQGAAGPVEEQFA---KEGFPVISNSPDH 113 (359)
T ss_dssp EEECCCTTTHHHHHHHHH---HTTCEEEECSSTT
T ss_pred EEECCChHHHHHHHHHHH---HCCCEEEEcCCCc
Confidence 999999988887776654 4678899987654
No 323
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.50 E-value=0.00024 Score=61.61 Aligned_cols=94 Identities=7% Similarity=0.073 Sum_probs=59.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHH-----------HcCceeecCchhhhccCCE
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL--KRRDAFE-----------SIGVKVLSDNNAVVEYSDV 74 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~--~~~~~l~-----------~~g~~~~~~~~~~~~~aDi 74 (272)
+++||+||| +|..|.-+.+.|.++.+ .++.....++. ++....- .....+.....+.+.++|+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~---~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDv 82 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPY---IKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDI 82 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSS---EEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCC---ceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCE
Confidence 457999999 69999999997766432 25543324433 1222210 0122222212233579999
Q ss_pred EEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 75 vil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
||+|+|.....+....+. ..|..+||.++..
T Consensus 83 vf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 83 IFSPLPQGAAGPVEEQFA---KEGFPVISNSPDH 113 (359)
T ss_dssp EEECCCTTTHHHHHHHHH---HTTCEEEECSSTT
T ss_pred EEECCChHHHHHHHHHHH---HCCCEEEEcCCCc
Confidence 999999988887776654 4678899987654
No 324
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=97.49 E-value=0.00042 Score=59.49 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=57.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHH----cCc---------------------eee
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFES----IGV---------------------KVL 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r--~~~~~~~l~~----~g~---------------------~~~ 62 (272)
++||||+|+|.+|..+.+.|.+... -+|...+++ +++....+.+ +|. .+.
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~p~---vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQSED---VELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSS---EEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred ceEEEEECcCHHHHHHHHHHhCCCC---eEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 3699999999999999999887532 166555363 5555545432 110 112
Q ss_pred c--Cchhh-h--ccCCEEEEeeCcccHHHHHHHhchhcCCCC--EEEEEc
Q 024121 63 S--DNNAV-V--EYSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVA 105 (272)
Q Consensus 63 ~--~~~~~-~--~~aDivil~v~~~~~~~v~~~l~~~l~~~~--~iis~~ 105 (272)
. ++.++ . .++|+||.|+|.....+...... ..|. +|||..
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l---~aGak~VVIs~p 126 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHL---KGGAKKVVISAP 126 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHH---HTTCSEEEESSC
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHH---HcCCCEEEEecC
Confidence 1 44443 1 47999999999887766665443 3444 777653
No 325
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=97.48 E-value=0.00022 Score=61.31 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=54.9
Q ss_pred CCCCCCCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH----HHHHH---HHHcCceee-cC------c
Q 024121 1 MDAFPIPAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNL----KRRDA---FESIGVKVL-SD------N 65 (272)
Q Consensus 1 ~~~~~~~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~----~~~~~---l~~~g~~~~-~~------~ 65 (272)
|..-+.+|..|+|.|.|+ |.+|+.+++.|++.|+ +|++. .|++ ++.+. +...++.+. .| .
T Consensus 1 M~~s~~~M~~~~IlVtGatG~iG~~l~~~L~~~g~----~V~~l-~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l 75 (346)
T 3i6i_A 1 MTVSPVPSPKGRVLIAGATGFIGQFVATASLDAHR----PTYIL-ARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAM 75 (346)
T ss_dssp ----------CCEEEECTTSHHHHHHHHHHHHTTC----CEEEE-ECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHH
T ss_pred CCCCCCCCCCCeEEEECCCcHHHHHHHHHHHHCCC----CEEEE-ECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHH
Confidence 444555667789999998 9999999999999999 99999 8866 44443 333565532 12 2
Q ss_pred hhhhc--cCCEEEEeeCcc---cHHHHHHHhc
Q 024121 66 NAVVE--YSDVVVFSVKPQ---VVKDVAMQIR 92 (272)
Q Consensus 66 ~~~~~--~aDivil~v~~~---~~~~v~~~l~ 92 (272)
.++++ ++|+||-+.... ....+++...
T Consensus 76 ~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~ 107 (346)
T 3i6i_A 76 EKILKEHEIDIVVSTVGGESILDQIALVKAMK 107 (346)
T ss_dssp HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHH
T ss_pred HHHHhhCCCCEEEECCchhhHHHHHHHHHHHH
Confidence 44567 899999998643 3345555444
No 326
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.42 E-value=0.0006 Score=57.94 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=63.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC---HHHHHHHHH-----cCc--eee--cC---chhhhccC
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN---LKRRDAFES-----IGV--KVL--SD---NNAVVEYS 72 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~---~~~~~~l~~-----~g~--~~~--~~---~~~~~~~a 72 (272)
...+++.|+|+|-+|.+++..|.+.|. .+|+++ +|+ .++++++.+ .+. ... ++ ..+.+.++
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga---~~V~i~-nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 227 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGV---KEISIF-NRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAES 227 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-ECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTC
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCC---CEEEEE-ECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCC
Confidence 456899999999999999999999986 379999 999 888877764 232 221 11 23456789
Q ss_pred CEEEEeeCcccHHH----HHHHhchhcCCCCEEEEEc
Q 024121 73 DVVVFSVKPQVVKD----VAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 73 Divil~v~~~~~~~----v~~~l~~~l~~~~~iis~~ 105 (272)
|+||-|+|...... .+. ....++++.+|+|+.
T Consensus 228 DiIINaTp~Gm~~~~~~~p~~-~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 228 VIFTNATGVGMKPFEGETLLP-SADMLRPELIVSDVV 263 (315)
T ss_dssp SEEEECSSTTSTTSTTCCSCC-CGGGCCTTCEEEESC
T ss_pred CEEEECccCCCCCCCCCCCCC-cHHHcCCCCEEEEec
Confidence 99999998542211 010 122356777777764
No 327
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.41 E-value=0.0006 Score=59.15 Aligned_cols=94 Identities=15% Similarity=0.164 Sum_probs=68.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC----HHH----H----HHHHH-cC-ceeecCchhhhccC
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN----LKR----R----DAFES-IG-VKVLSDNNAVVEYS 72 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~----~~~----~----~~l~~-~g-~~~~~~~~~~~~~a 72 (272)
.....||.|+|+|.+|..+++.|...|. .+|+++ ||+ .++ + +.+.+ .+ .....++.++++++
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~---~~I~v~-Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~A 264 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGV---KNVVAV-DRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGA 264 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTC---CEEEEE-ETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTC
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCC---CeEEEE-ECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccC
Confidence 4466899999999999999999999986 379999 988 544 2 22333 12 22245678999999
Q ss_pred CEEEEeeCccc-HHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 73 DVVVFSVKPQV-VKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 73 Divil~v~~~~-~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
|++|-+..|.. -+++++.+. ++.+|+.++++.
T Consensus 265 DVlIG~Sap~l~t~emVk~Ma----~~pIIfalSNPt 297 (388)
T 1vl6_A 265 DFFIGVSRGNILKPEWIKKMS----RKPVIFALANPV 297 (388)
T ss_dssp SEEEECSCSSCSCHHHHTTSC----SSCEEEECCSSS
T ss_pred CEEEEeCCCCccCHHHHHhcC----CCCEEEEcCCCC
Confidence 99998875443 466766643 566888887765
No 328
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.41 E-value=0.00064 Score=56.46 Aligned_cols=92 Identities=21% Similarity=0.234 Sum_probs=63.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c-----CceeecCchhhhccCCEEEEeeCcc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I-----GVKVLSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~-----g~~~~~~~~~~~~~aDivil~v~~~ 82 (272)
..+++.|+|+|-.+++++..|.+.|. .+|+++ ||+.++++.+.+ . .... ....+.++++|+||=|+|..
T Consensus 124 ~~~~~lilGaGGaarai~~aL~~~g~---~~i~i~-nRt~~ra~~la~~~~~~~~~~~~-~~~~~~~~~~dliiNaTp~G 198 (269)
T 3tum_A 124 AGKRALVIGCGGVGSAIAYALAEAGI---ASITLC-DPSTARMGAVCELLGNGFPGLTV-STQFSGLEDFDLVANASPVG 198 (269)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCHHHHHHHHHHHHHHCTTCEE-ESCCSCSTTCSEEEECSSTT
T ss_pred ccCeEEEEecHHHHHHHHHHHHHhCC---CeEEEe-CCCHHHHHHHHHHHhccCCccee-hhhhhhhhcccccccCCccc
Confidence 45789999999999999999999986 389999 999999888776 1 2223 23334467899999998743
Q ss_pred cHH----HHHHHhchhcCCCCEEEEEc
Q 024121 83 VVK----DVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 83 ~~~----~v~~~l~~~l~~~~~iis~~ 105 (272)
... .+-......+.++.++.|+.
T Consensus 199 m~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 199 MGTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp CSTTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred cCCCCCCCCChHHHhccCCCcEEEEEc
Confidence 210 01111223356777887764
No 329
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.38 E-value=0.00029 Score=58.26 Aligned_cols=73 Identities=12% Similarity=0.201 Sum_probs=56.9
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHH
Q 024121 8 AESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 8 ~~~~~IgiIG~G~-mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~ 86 (272)
...+++.|||.|. +|.+++..|.+.|. .|+++ ++.. .+..+.+++||+||.+++...+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA----tVtv~-~~~t--------------~~L~~~~~~ADIVI~Avg~p~~-- 206 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY----TVSVC-HSKT--------------KDIGSMTRSSKIVVVAVGRPGF-- 206 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SCHHHHHHHSSEEEECSSCTTC--
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC----eEEEE-eCCc--------------ccHHHhhccCCEEEECCCCCcc--
Confidence 3568999999985 89999999999998 99999 7642 4566788999999999964321
Q ss_pred HHHHhchhcCCCCEEEEE
Q 024121 87 VAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~ 104 (272)
+. ...++++.+|||+
T Consensus 207 -I~--~~~vk~GavVIDv 221 (276)
T 3ngx_A 207 -LN--REMVTPGSVVIDV 221 (276)
T ss_dssp -BC--GGGCCTTCEEEEC
T ss_pred -cc--HhhccCCcEEEEe
Confidence 11 1346889999986
No 330
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.37 E-value=0.00052 Score=58.24 Aligned_cols=94 Identities=18% Similarity=0.224 Sum_probs=62.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC---HHHHHHHHH-----cCce--eec--Cc---hhhhccC
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN---LKRRDAFES-----IGVK--VLS--DN---NAVVEYS 72 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~---~~~~~~l~~-----~g~~--~~~--~~---~~~~~~a 72 (272)
...+++.|+|+|-+|.+++..|.+.|. .+|+++ +|+ .++++++.+ .+.. ... +. .+.+.++
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~---~~v~v~-nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~ 221 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGI---KEIKLF-NRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASA 221 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-ECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHC
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCC---CEEEEE-ECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCc
Confidence 356799999999999999999999986 379999 999 888877764 2322 221 21 3446789
Q ss_pred CEEEEeeCcccHHHHHHHh---chhcCCCCEEEEEc
Q 024121 73 DVVVFSVKPQVVKDVAMQI---RPLLSRKKLLVSVA 105 (272)
Q Consensus 73 Divil~v~~~~~~~v~~~l---~~~l~~~~~iis~~ 105 (272)
|+||-|+|......--..+ ...++++.+++|+.
T Consensus 222 DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 257 (312)
T 3t4e_A 222 DILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV 257 (312)
T ss_dssp SEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred eEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence 9999998754311000011 12356677777764
No 331
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.36 E-value=0.00055 Score=53.78 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=48.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-c------CchhhhccCCEEEEeeC
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-S------DNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~------~~~~~~~~aDivil~v~ 80 (272)
.|+|.|.|. |.+|+.+++.|.+.|+ +|++. +|++++...+...++... . +..++++++|+||-+..
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY----EVTVL-VRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC----eEEEE-EeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 378999987 9999999999999999 99999 998876533212233321 1 22345678999998874
No 332
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=97.32 E-value=0.00015 Score=62.87 Aligned_cols=95 Identities=15% Similarity=0.226 Sum_probs=59.0
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHH
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v 87 (272)
.+||+||| +|..|.-|.+.|.+.+| +..++.....++. .+.-.+......+.....+...++|+||.|+|.....+.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~-p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~ 80 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTL-PIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKY 80 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCC-CEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCC-CcEEEEEEEccccCCCcceecCCCceEeeCCHHHhcCCCEEEECCChHhHHHH
Confidence 47999999 69999999998888765 3234444423221 111001101122221112346789999999998877777
Q ss_pred HHHhchhcCCCCEEEEEcCCC
Q 024121 88 AMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 88 ~~~l~~~l~~~~~iis~~~~~ 108 (272)
.+.+. ..|..+||.++..
T Consensus 81 a~~~~---~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 81 APYAV---KAGVVVVDNTSYF 98 (366)
T ss_dssp HHHHH---HTTCEEEECSSTT
T ss_pred HHHHH---HCCCEEEEcCCcc
Confidence 76653 4677899987653
No 333
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.32 E-value=0.00031 Score=58.84 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=56.7
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
....+++.|||.|. +|.+++..|.+.|. .|+++ +|....++ ..+.+++||+||.+++...+
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~-~~~T~~l~------------l~~~~~~ADIVI~Avg~p~~- 223 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENA----TVTIV-HSGTSTED------------MIDYLRTADIVIAAMGQPGY- 223 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTSCHHH------------HHHHHHTCSEEEECSCCTTC-
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC----eEEEE-eCCCCCch------------hhhhhccCCEEEECCCCCCC-
Confidence 34668999999987 79999999999998 99999 87432211 12678999999999974321
Q ss_pred HHHHHhchhcCCCCEEEEE
Q 024121 86 DVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~ 104 (272)
+. ...++++.+|||+
T Consensus 224 --I~--~~~vk~GavVIDv 238 (300)
T 4a26_A 224 --VK--GEWIKEGAAVVDV 238 (300)
T ss_dssp --BC--GGGSCTTCEEEEC
T ss_pred --Cc--HHhcCCCcEEEEE
Confidence 11 1336889999986
No 334
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.31 E-value=0.00079 Score=55.39 Aligned_cols=89 Identities=15% Similarity=0.143 Sum_probs=55.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHHHHH------cCceee--
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDAFES------IGVKVL-- 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-------------------~~~~~l~~------~g~~~~-- 62 (272)
..+|.|||+|.+|+.++.+|...|. .+++++ |++. .|++.+++ .++.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gv---g~i~lv-D~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGV---GTLVLA-DDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC---SEEEEE-CCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCC---CeEEEE-eCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 4689999999999999999999997 378888 7643 33333332 133321
Q ss_pred c------CchhhhccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEE
Q 024121 63 S------DNNAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 63 ~------~~~~~~~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
. +..+.++++|+||.|++....+..+.+... ..+..+|+.
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~--~~~~p~i~~ 149 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTDNMATRQEINAACV--ALNTPLITA 149 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHH--HTTCCEEEE
T ss_pred eccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHH--HhCCCEEEE
Confidence 1 123456678888888865544545544332 133445543
No 335
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.30 E-value=0.00094 Score=57.97 Aligned_cols=101 Identities=17% Similarity=0.185 Sum_probs=60.7
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCC-CcEEEE-eCCCH--HHHH----HHHH--c----CceeecCchhhhccCC
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPP-DRICTA-VHSNL--KRRD----AFES--I----GVKVLSDNNAVVEYSD 73 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g~~~~-~~V~v~-~~r~~--~~~~----~l~~--~----g~~~~~~~~~~~~~aD 73 (272)
+.+||+||| +|.+|.+++..|...+.+.. .+|.++ .+.++ ++++ +|.. . ++.+..+..+.+++||
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daD 110 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD 110 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCC
Confidence 457999999 79999999999998876542 236654 03322 2222 2222 1 2344555567799999
Q ss_pred EEEEee--C--cc-c-----------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 74 VVVFSV--K--PQ-V-----------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 74 ivil~v--~--~~-~-----------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
+||++- | |. . ++++.+.+..+..|+.+++-.++++.
T Consensus 111 vVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD 162 (375)
T 7mdh_A 111 WALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCN 162 (375)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchh
Confidence 999974 3 21 1 12223334444357777776666543
No 336
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.28 E-value=0.00045 Score=57.29 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcccHH-HHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCccc
Q 024121 7 PAESFILGFIGAGKM-AESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 7 ~~~~~~IgiIG~G~m-G~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~ 83 (272)
....+++.|||.|++ |..++..|... |. .|+++ +++. .+..+.+++||+||.+++...
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a----tVtv~-h~~t--------------~~L~~~~~~ADIVI~Avg~p~ 215 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENA----TVTLC-HTGT--------------RDLPALTRQADIVVAAVGVAH 215 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCC----EEEEE-CTTC--------------SCHHHHHTTCSEEEECSCCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCC----EEEEE-ECch--------------hHHHHHHhhCCEEEECCCCCc
Confidence 456789999999986 99999999998 66 99999 7664 356677899999999996433
Q ss_pred HHHHHHHhchhcCCCCEEEEE
Q 024121 84 VKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~ 104 (272)
+ +. ...++++.+|||+
T Consensus 216 ~---I~--~~~vk~GavVIDV 231 (281)
T 2c2x_A 216 L---LT--ADMVRPGAAVIDV 231 (281)
T ss_dssp C---BC--GGGSCTTCEEEEC
T ss_pred c---cC--HHHcCCCcEEEEc
Confidence 2 11 1235788899986
No 337
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.28 E-value=0.00068 Score=56.37 Aligned_cols=74 Identities=12% Similarity=0.227 Sum_probs=57.3
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
....+++.|||.|. +|.+++..|...|. .|+++ ++.. .+..+.+++||+||.+++...+
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~-hs~t--------------~~L~~~~~~ADIVI~Avg~p~~- 217 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKA----TVTTC-HRFT--------------TDLKSHTTKADILIVAVGKPNF- 217 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SSHHHHHTTCSEEEECCCCTTC-
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC----eEEEE-eCCc--------------hhHHHhcccCCEEEECCCCCCC-
Confidence 45678999999987 69999999999998 99999 7652 3556778999999999964321
Q ss_pred HHHHHhchhcCCCCEEEEE
Q 024121 86 DVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~ 104 (272)
+. ...++++.+|||+
T Consensus 218 --I~--~~~vk~GavVIDv 232 (285)
T 3l07_A 218 --IT--ADMVKEGAVVIDV 232 (285)
T ss_dssp --BC--GGGSCTTCEEEEC
T ss_pred --CC--HHHcCCCcEEEEe
Confidence 11 1345789899986
No 338
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.28 E-value=0.0024 Score=54.92 Aligned_cols=102 Identities=14% Similarity=0.157 Sum_probs=63.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCC---CCcEEEEeCCCHH--HHH----HHHH------cCceeecCchhhhc
Q 024121 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLP---PDRICTAVHSNLK--RRD----AFES------IGVKVLSDNNAVVE 70 (272)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~---~~~V~v~~~r~~~--~~~----~l~~------~g~~~~~~~~~~~~ 70 (272)
.++..||+|+|+ |.+|++++..|.....+. +.++.++ |.++. +++ ++.. .++.+..+..++++
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~-Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~ 99 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLL-DIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFD 99 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEE-CCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTT
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEE-CCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhC
Confidence 344569999996 999999999888765432 1268899 98753 222 2222 12345566778899
Q ss_pred cCCEEEEee--C--cc-c-----------HHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 71 YSDVVVFSV--K--PQ-V-----------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 71 ~aDivil~v--~--~~-~-----------~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
+||+||++- | |. . ++++.+.+..+-.|+.+|+-.++++.
T Consensus 100 ~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd 154 (345)
T 4h7p_A 100 GVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPAN 154 (345)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcc
Confidence 999999974 3 21 1 22333445555457766665666543
No 339
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=97.26 E-value=0.00037 Score=60.78 Aligned_cols=95 Identities=16% Similarity=0.106 Sum_probs=59.2
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEE-EEe-CCCHH-HHHHHHH-----------cCceeec-Cchhhhcc
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRIC-TAV-HSNLK-RRDAFES-----------IGVKVLS-DNNAVVEY 71 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~-v~~-~r~~~-~~~~l~~-----------~g~~~~~-~~~~~~~~ 71 (272)
|+++||+||| +|..|.-|.+.|.++.+ .++. ++. .|+.- +..+... ....+.. +..+.+.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~---~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~~ 93 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPE---FEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLE 93 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSS---EEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGGG
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCC---ceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhccc
Confidence 4557899999 59999999998777543 2553 321 23322 1221100 1122211 22214678
Q ss_pred CCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 72 aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
+|+||+|+|.....++...+. ..|..|||.++..
T Consensus 94 ~Dvvf~alp~~~s~~~~~~~~---~~G~~VIDlSa~f 127 (381)
T 3hsk_A 94 CDVVFSGLDADVAGDIEKSFV---EAGLAVVSNAKNY 127 (381)
T ss_dssp CSEEEECCCHHHHHHHHHHHH---HTTCEEEECCSTT
T ss_pred CCEEEECCChhHHHHHHHHHH---hCCCEEEEcCCcc
Confidence 999999999988888877654 4678899987654
No 340
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.25 E-value=0.00015 Score=58.22 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=49.9
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-------cCchhhhccCCEEEEeeC
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-------SDNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-------~~~~~~~~~aDivil~v~ 80 (272)
++|||.|.| +|.+|+.+++.|.+.|+ +|++. +|++++...+. .++... .+..++++++|+||-+..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~ 76 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGF----EVTAV-VRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFN 76 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTC----EEEEE-CSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC----EEEEE-EcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence 358999998 59999999999999999 99999 99987654332 233221 123456778999999874
Q ss_pred c
Q 024121 81 P 81 (272)
Q Consensus 81 ~ 81 (272)
+
T Consensus 77 ~ 77 (227)
T 3dhn_A 77 P 77 (227)
T ss_dssp C
T ss_pred C
Confidence 3
No 341
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.22 E-value=0.0015 Score=55.96 Aligned_cols=86 Identities=10% Similarity=0.047 Sum_probs=58.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cC---c---hhh-hccCCEEEEeeCc
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD---N---NAV-VEYSDVVVFSVKP 81 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~---~---~~~-~~~aDivil~v~~ 81 (272)
.++|.|+|+|..|..+++.|.+.| .|.+. ++++++.+ +.+.++.+. .| . .++ ++++|.+++++++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g-----~v~vi-d~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~ 187 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE-----VFVLA-EDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLES 187 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC-----EEEEE-SCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC-----cEEEE-eCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc
Confidence 457999999999999999998876 27788 99999998 777666532 22 1 122 5689999999987
Q ss_pred ccHHHHHHHhchhcCCCCEEE
Q 024121 82 QVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~ii 102 (272)
+...-..-.....+.++..++
T Consensus 188 d~~n~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 188 DSETIHCILGIRKIDESVRII 208 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSEEE
T ss_pred cHHHHHHHHHHHHHCCCCeEE
Confidence 644332222333345653444
No 342
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=97.21 E-value=0.0019 Score=55.22 Aligned_cols=89 Identities=11% Similarity=0.182 Sum_probs=58.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHHHH----H--cCceee--
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDAFE----S--IGVKVL-- 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-------------------~~~~~l~----~--~g~~~~-- 62 (272)
..||.|||+|-+|+.++.+|...|. .+++++ |++. .|++.++ + .++.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV---g~Itlv-D~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~ 109 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFV-DNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 109 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEE-CCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CEEEEe-cCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence 4789999999999999999999997 378888 7643 2333332 2 233321
Q ss_pred c---------------------CchhhhccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEE
Q 024121 63 S---------------------DNNAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 63 ~---------------------~~~~~~~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
. +..+.++++|+||.|+.....+..+..+.. ..++.+|+.
T Consensus 110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~--~~~~plI~a 170 (340)
T 3rui_A 110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSN--IENKTVINA 170 (340)
T ss_dssp CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHH--HTTCEEEEE
T ss_pred eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHH--HcCCcEEEe
Confidence 1 123567789999999866555555554432 245566653
No 343
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.20 E-value=0.00078 Score=56.15 Aligned_cols=66 Identities=17% Similarity=0.066 Sum_probs=51.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceee-c------CchhhhccCCEEEEeeCc
Q 024121 11 FILGFIGA-GKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVL-S------DNNAVVEYSDVVVFSVKP 81 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~------~~~~~~~~aDivil~v~~ 81 (272)
|||.|.|. |.+|+.+++.|.+. |+ +|.+. .|++++...+...++.+. . +..++++++|+||.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~----~V~~~-~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHID----HFHIG-VRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCT----TEEEE-ESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCC----cEEEE-ECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 68999985 99999999999987 88 99999 999887665555555432 1 234567789999998743
No 344
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.19 E-value=0.0022 Score=56.84 Aligned_cols=96 Identities=15% Similarity=0.257 Sum_probs=64.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeC----CC----HH-HHHHHHH--------cCce-eecCchhhh
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVH----SN----LK-RRDAFES--------IGVK-VLSDNNAVV 69 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~----r~----~~-~~~~l~~--------~g~~-~~~~~~~~~ 69 (272)
....||.|+|+|.+|.+++..|.+.|. ++.+|+++ | |+ .. +.+.+.. .+.. ...+..+++
T Consensus 184 l~~~rvlvlGAGgAg~aia~~L~~~G~-~~~~I~vv-d~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l 261 (439)
T 2dvm_A 184 ISEITLALFGAGAAGFATLRILTEAGV-KPENVRVV-ELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEAL 261 (439)
T ss_dssp TTTCCEEEECCSHHHHHHHHHHHHTTC-CGGGEEEE-EEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCC-CcCeEEEE-EccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHh
Confidence 356789999999999999999999984 33489999 8 76 32 2111221 1111 123567788
Q ss_pred ccCCEEEEeeCc--ccHH-HHHHHhchhcCCCCEEEEEcCCCC
Q 024121 70 EYSDVVVFSVKP--QVVK-DVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 70 ~~aDivil~v~~--~~~~-~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
+++|+||-+++. ..+. +.+ ..+.++.+|+++.++.+
T Consensus 262 ~~aDVlInaT~~~~G~~~~e~v----~~m~~~~iVfDLynP~~ 300 (439)
T 2dvm_A 262 KDADVLISFTRPGPGVIKPQWI----EKMNEDAIVFPLANPVP 300 (439)
T ss_dssp TTCSEEEECSCCCSSSSCHHHH----TTSCTTCEEEECCSSSC
T ss_pred ccCCEEEEcCCCccCCCChHHH----HhcCCCCEEEECCCCCC
Confidence 899999999976 4443 222 23557778888866654
No 345
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.19 E-value=0.00074 Score=56.17 Aligned_cols=74 Identities=15% Similarity=0.205 Sum_probs=57.5
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
....+++.|||.|. .|.+++..|...|. .|+++ +++. .+..+.+++||+||.+++...+
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA----tVtv~-h~~t--------------~~L~~~~~~ADIVI~Avg~p~~- 216 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGA----TVSVC-HIKT--------------KDLSLYTRQADLIIVAAGCVNL- 216 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SCHHHHHTTCSEEEECSSCTTC-
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC----eEEEE-eCCc--------------hhHHHHhhcCCEEEECCCCCCc-
Confidence 45678999999987 69999999999998 99999 7653 3556778999999999964321
Q ss_pred HHHHHhchhcCCCCEEEEE
Q 024121 86 DVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~ 104 (272)
+. ...++++.+|||+
T Consensus 217 --I~--~~~vk~GavVIDV 231 (285)
T 3p2o_A 217 --LR--SDMVKEGVIVVDV 231 (285)
T ss_dssp --BC--GGGSCTTEEEEEC
T ss_pred --CC--HHHcCCCeEEEEe
Confidence 11 1346789888886
No 346
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.17 E-value=0.00083 Score=56.34 Aligned_cols=90 Identities=18% Similarity=0.241 Sum_probs=61.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC----------ceeecCchhhhccCCEEE
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG----------VKVLSDNNAVVEYSDVVV 76 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g----------~~~~~~~~~~~~~aDivi 76 (272)
...+++.|+|+|.+|.+++..|.+.| +|+++ +|++++++.+.+ .+ +.+ .+..+.+.++|+||
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G-----~V~v~-~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~~~~~~DilV 198 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN-----NIIIA-NRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLDGVDIII 198 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-----EEEEE-CSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCTTCCEEE
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-----CEEEE-ECCHHHHHHHHHHHhhhcccccceeEEE-eeHHHhhCCCCEEE
Confidence 35678999999999999999999886 79999 999988877654 11 122 22245567899999
Q ss_pred EeeCcccHHH---H-HHHhchhcCCCCEEEEEc
Q 024121 77 FSVKPQVVKD---V-AMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 77 l~v~~~~~~~---v-~~~l~~~l~~~~~iis~~ 105 (272)
.+++...... . +. -...++++.+++++.
T Consensus 199 n~ag~~~~~~~~~~~~~-~~~~l~~~~~v~Dv~ 230 (287)
T 1nvt_A 199 NATPIGMYPNIDVEPIV-KAEKLREDMVVMDLI 230 (287)
T ss_dssp ECSCTTCTTCCSSCCSS-CSTTCCSSSEEEECC
T ss_pred ECCCCCCCCCCCCCCCC-CHHHcCCCCEEEEee
Confidence 9987543210 0 00 012355677777764
No 347
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.13 E-value=0.00071 Score=56.33 Aligned_cols=74 Identities=14% Similarity=0.177 Sum_probs=57.3
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
....+++.|||.|+ .|..++..|...|. .|+++ ++.. .+..+.+++||+||.+++...+
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~-hs~t--------------~~L~~~~~~ADIVI~Avg~p~l- 215 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGC----TTTVT-HRFT--------------KNLRHHVENADLLIVAVGKPGF- 215 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTC----EEEEE-CSSC--------------SCHHHHHHHCSEEEECSCCTTC-
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCC----eEEEE-eCCc--------------hhHHHHhccCCEEEECCCCcCc-
Confidence 45668999999997 59999999999998 99999 7654 3556778899999999964331
Q ss_pred HHHHHhchhcCCCCEEEEE
Q 024121 86 DVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~ 104 (272)
+. ...++++.+|||+
T Consensus 216 --I~--~~~vk~GavVIDV 230 (288)
T 1b0a_A 216 --IP--GDWIKEGAIVIDV 230 (288)
T ss_dssp --BC--TTTSCTTCEEEEC
T ss_pred --CC--HHHcCCCcEEEEc
Confidence 11 1235789999986
No 348
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=97.12 E-value=0.0011 Score=55.60 Aligned_cols=78 Identities=18% Similarity=0.229 Sum_probs=54.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCC------HHHHHHH---HHcCceee-c------CchhhhccC
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSN------LKRRDAF---ESIGVKVL-S------DNNAVVEYS 72 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~------~~~~~~l---~~~g~~~~-~------~~~~~~~~a 72 (272)
+++|.|+|+ |.+|+++++.|++.|+ +|++. .|+ +++.+.+ ...|+.+. . +..++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~l-~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH----PTFLL-VRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC----CEEEE-CCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC----CEEEE-ECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCC
Confidence 578999986 9999999999999999 99999 887 3444333 23465432 1 224556789
Q ss_pred CEEEEeeCcc---cHHHHHHHhc
Q 024121 73 DVVVFSVKPQ---VVKDVAMQIR 92 (272)
Q Consensus 73 Divil~v~~~---~~~~v~~~l~ 92 (272)
|+||.+.... ....+++...
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa~ 101 (308)
T 1qyc_A 79 DVVISTVGSLQIESQVNIIKAIK 101 (308)
T ss_dssp SEEEECCCGGGSGGGHHHHHHHH
T ss_pred CEEEECCcchhhhhHHHHHHHHH
Confidence 9999998543 3345554443
No 349
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=97.12 E-value=0.0023 Score=54.38 Aligned_cols=73 Identities=12% Similarity=0.142 Sum_probs=54.2
Q ss_pred CCCCCCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-------cCceee--cC------c
Q 024121 2 DAFPIPAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-------IGVKVL--SD------N 65 (272)
Q Consensus 2 ~~~~~~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-------~g~~~~--~~------~ 65 (272)
.+++..++.|+|.|.|+ |-+|+.+++.|++.|+ +|++. +|++++.+.+.+ .++... .| .
T Consensus 3 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~ 77 (342)
T 1y1p_A 3 IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGY----KVRGT-ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAY 77 (342)
T ss_dssp STTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTT
T ss_pred CCcccCCCCCEEEEECCccHHHHHHHHHHHHCCC----EEEEE-eCCcccHHHHHHHhhccCCCceEEEEecCCcChHHH
Confidence 45666777889999987 9999999999999999 99999 998876654432 133322 12 2
Q ss_pred hhhhccCCEEEEee
Q 024121 66 NAVVEYSDVVVFSV 79 (272)
Q Consensus 66 ~~~~~~aDivil~v 79 (272)
.++++++|+||-+.
T Consensus 78 ~~~~~~~d~vih~A 91 (342)
T 1y1p_A 78 DEVIKGAAGVAHIA 91 (342)
T ss_dssp TTTTTTCSEEEECC
T ss_pred HHHHcCCCEEEEeC
Confidence 34556789999876
No 350
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=97.11 E-value=0.0026 Score=54.76 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=56.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeC-C-CHHHHHHHHH----cC-------------------cee
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVH-S-NLKRRDAFES----IG-------------------VKV 61 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~-r-~~~~~~~l~~----~g-------------------~~~ 61 (272)
.++++||||+|.|.+|.-+.+.|.++.. -+|...++ + +.+....+.+ .| +.+
T Consensus 14 ~~~~ikVgI~G~G~iGr~llR~l~~~p~---veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v 90 (354)
T 3cps_A 14 LYFQGTLGINGFGRIGRLVLRACMERND---ITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKV 90 (354)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHTCSS---CEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEE
T ss_pred cCcceEEEEECCCHHHHHHHHHHHcCCC---eEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEE
Confidence 4456799999999999999999887632 27766535 3 3333333322 11 112
Q ss_pred ec--Cchhhh---ccCCEEEEeeCcccHHHHHHHhchhcCCCC--EEEEEcC
Q 024121 62 LS--DNNAVV---EYSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVAA 106 (272)
Q Consensus 62 ~~--~~~~~~---~~aDivil~v~~~~~~~v~~~l~~~l~~~~--~iis~~~ 106 (272)
.. ++.++- .++|+||.|+|...-.+..... +..|. +|||..+
T Consensus 91 ~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~---l~~GakkvVId~pa 139 (354)
T 3cps_A 91 FQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLH---LKGGAKKVIISAPP 139 (354)
T ss_dssp ECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGG---GTTTCSEEEESSCC
T ss_pred EecCChHHCCcccCCCCEEEECCCchhhHHHHHHH---HHcCCcEEEEeCCC
Confidence 21 344321 4799999999988776666544 34454 8887643
No 351
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.11 E-value=0.001 Score=55.77 Aligned_cols=75 Identities=12% Similarity=0.186 Sum_probs=58.0
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
....+++.|||.|+ +|..++..|...|. .|+++ +++. .+..+.+++||+||.+++...+
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~-hs~t--------------~~L~~~~~~ADIVI~Avg~p~~- 221 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA----TVTTC-HSKT--------------AHLDEEVNKGDILVVATGQPEM- 221 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SSHHHHHTTCSEEEECCCCTTC-
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCC----eEEEE-ECCc--------------ccHHHHhccCCEEEECCCCccc-
Confidence 45678999999996 69999999999998 99999 7552 3567778999999999964321
Q ss_pred HHHHHhchhcCCCCEEEEEc
Q 024121 86 DVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~ 105 (272)
+. ...++++.+|||+.
T Consensus 222 --I~--~~~vk~GavVIDVg 237 (301)
T 1a4i_A 222 --VK--GEWIKPGAIVIDCG 237 (301)
T ss_dssp --BC--GGGSCTTCEEEECC
T ss_pred --CC--HHHcCCCcEEEEcc
Confidence 11 12357899999873
No 352
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=97.10 E-value=0.0013 Score=55.30 Aligned_cols=66 Identities=14% Similarity=0.225 Sum_probs=49.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCC-----HHHHHHHH---HcCceee----c---CchhhhccCC
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSN-----LKRRDAFE---SIGVKVL----S---DNNAVVEYSD 73 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~-----~~~~~~l~---~~g~~~~----~---~~~~~~~~aD 73 (272)
+|+|.|.|. |.+|+++++.|++.|+ +|++. .|+ +++.+.+. ..++.+. . +..++++++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH----PTYVL-FRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC----CEEEE-CCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC----cEEEE-ECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCC
Confidence 578999985 9999999999999999 99999 898 45544432 3455432 1 2345677899
Q ss_pred EEEEeeC
Q 024121 74 VVVFSVK 80 (272)
Q Consensus 74 ivil~v~ 80 (272)
+||.+..
T Consensus 79 ~vi~~a~ 85 (313)
T 1qyd_A 79 VVISALA 85 (313)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999874
No 353
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=97.10 E-value=0.00028 Score=58.83 Aligned_cols=63 Identities=16% Similarity=0.312 Sum_probs=46.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-------cCchhhhcc-CCEEEEee
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-------SDNNAVVEY-SDVVVFSV 79 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-------~~~~~~~~~-aDivil~v 79 (272)
|++|||.|.|+|-+|+.++..|++.|+ +|++. +|++++.. .++... .+..++++. +|+||-+.
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGH----EVTGL-RRSAQPMP----AGVQTLIADVTRPDTLASIVHLRPEILVYCV 71 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ECTTSCCC----TTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCccccc----cCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence 356899999999999999999999999 99999 88876521 232211 122344555 99999876
No 354
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=97.09 E-value=0.00072 Score=54.00 Aligned_cols=63 Identities=13% Similarity=0.221 Sum_probs=47.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-----ec---CchhhhccCCEEEEeeC
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-----LS---DNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-----~~---~~~~~~~~aDivil~v~ 80 (272)
|||.|.| +|.+|+.+++.|++.|+ +|++. +|++++.+.+ .++.. .+ +..++++++|+||-+..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag 72 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY----QIYAG-ARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG 72 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC----EEEEE-ESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence 6899998 69999999999999999 99999 9998765433 23321 11 22345678999998874
No 355
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=97.08 E-value=0.001 Score=56.31 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=54.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH-HHHH---HHHcCceee-c------CchhhhccCCEEEE
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLK-RRDA---FESIGVKVL-S------DNNAVVEYSDVVVF 77 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~-~~~~---l~~~g~~~~-~------~~~~~~~~aDivil 77 (272)
+++|.|.|+ |.+|+++++.|++.|+ +|++. +|+++ +.+. +...++.+. . +..++++++|+||.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~l-~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGH----PTYVF-TRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC----CEEEE-ECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCC----cEEEE-ECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 458999985 9999999999999999 99999 88764 3332 333565432 1 23456778999999
Q ss_pred eeCcc---cHHHHHHHhc
Q 024121 78 SVKPQ---VVKDVAMQIR 92 (272)
Q Consensus 78 ~v~~~---~~~~v~~~l~ 92 (272)
+.... ....+++...
T Consensus 86 ~a~~~~~~~~~~l~~aa~ 103 (318)
T 2r6j_A 86 ALAFPQILDQFKILEAIK 103 (318)
T ss_dssp CCCGGGSTTHHHHHHHHH
T ss_pred CCchhhhHHHHHHHHHHH
Confidence 98542 3445555443
No 356
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.03 E-value=0.0027 Score=54.39 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=48.0
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCC---CcEEEEeCCCH--HHHH----HHHHc------CceeecCchhhhccCC
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPP---DRICTAVHSNL--KRRD----AFESI------GVKVLSDNNAVVEYSD 73 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~---~~V~v~~~r~~--~~~~----~l~~~------g~~~~~~~~~~~~~aD 73 (272)
.+||.|+| +|.+|++++..|...|.... -.+.++ |+++ ++++ ++... ++.+..+..+.+++||
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~-Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daD 81 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLL-DITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEE-CCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEE-eCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCC
Confidence 47999999 79999999999998876321 128889 9864 2222 23221 1234455567789999
Q ss_pred EEEEee
Q 024121 74 VVVFSV 79 (272)
Q Consensus 74 ivil~v 79 (272)
+||++-
T Consensus 82 vVvitA 87 (333)
T 5mdh_A 82 VAILVG 87 (333)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999985
No 357
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.03 E-value=0.0013 Score=58.79 Aligned_cols=69 Identities=14% Similarity=0.165 Sum_probs=53.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH----HHHHHHHHcCceeec--Cchhhhcc-CCEEEEe--e
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL----KRRDAFESIGVKVLS--DNNAVVEY-SDVVVFS--V 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~----~~~~~l~~~g~~~~~--~~~~~~~~-aDivil~--v 79 (272)
..+||.|||.|..|.+.|+.|.+.|+ +|+++ |+++ ...+.|.+.|+.+.. +..+...+ +|+||++ +
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~----~V~~~-D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi 82 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGA----IVTVN-DGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGI 82 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTC----EEEEE-ESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC----EEEEE-eCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcC
Confidence 46799999999999999999999999 99999 8753 234567778887642 23445566 8999987 3
Q ss_pred Ccc
Q 024121 80 KPQ 82 (272)
Q Consensus 80 ~~~ 82 (272)
|++
T Consensus 83 ~~~ 85 (451)
T 3lk7_A 83 PYN 85 (451)
T ss_dssp CTT
T ss_pred CCC
Confidence 544
No 358
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.01 E-value=0.0012 Score=54.83 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHH
Q 024121 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (272)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~ 85 (272)
....+++.|||.|. .|.+++..|...|. .|+++ ++.. .+..+.+++||+||.+++...+
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gA----tVtv~-hs~T--------------~~L~~~~~~ADIVI~Avg~p~~- 217 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGC----TVTVT-HRFT--------------RDLADHVSRADLVVVAAGKPGL- 217 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SCHHHHHHTCSEEEECCCCTTC-
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC----eEEEE-eCCC--------------cCHHHHhccCCEEEECCCCCCC-
Confidence 45678999999876 89999999999998 99999 7643 2456778999999999964321
Q ss_pred HHHHHhchhcCCCCEEEEE
Q 024121 86 DVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~ 104 (272)
+. ...++++.+||++
T Consensus 218 --I~--~~~vk~GavVIDv 232 (286)
T 4a5o_A 218 --VK--GEWIKEGAIVIDV 232 (286)
T ss_dssp --BC--GGGSCTTCEEEEC
T ss_pred --CC--HHHcCCCeEEEEe
Confidence 11 1346889999986
No 359
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.99 E-value=0.0033 Score=57.68 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=30.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL 48 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~ 48 (272)
..||.|||+|-+|+.++.+|...|. .+++++ |++.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGV---G~ItLv-D~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFV-DNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEE-CCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEE-cCCC
Confidence 4689999999999999999999997 478888 7753
No 360
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.93 E-value=0.0016 Score=58.00 Aligned_cols=92 Identities=11% Similarity=0.128 Sum_probs=58.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-----ecC-----chhhhccCCEEEEeeC
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-----LSD-----NNAVVEYSDVVVFSVK 80 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-----~~~-----~~~~~~~aDivil~v~ 80 (272)
+||.|||+|.||+.++..+.++.-+...+|++. +++....+.....|+.. ..+ ..+++++.|+||-+.+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s~ 92 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVSI 92 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECCc
Confidence 689999999999999999998753233478888 87655433222234332 122 2234555688888777
Q ss_pred cccHHHHHHHhchhcCCCCEEEEEcC
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
+....++++... ..|..++|++.
T Consensus 93 ~~~~l~Im~acl---eaGv~YlDTa~ 115 (480)
T 2ph5_A 93 GISSLALIILCN---QKGALYINAAT 115 (480)
T ss_dssp SSCHHHHHHHHH---HHTCEEEESSC
T ss_pred cccCHHHHHHHH---HcCCCEEECCC
Confidence 776666665432 34667777653
No 361
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.92 E-value=0.0017 Score=54.32 Aligned_cols=66 Identities=14% Similarity=0.279 Sum_probs=49.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHH--HHHHHcCceee-cC------chhhhccCCEEEEe
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRR--DAFESIGVKVL-SD------NNAVVEYSDVVVFS 78 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g-~~~~~~V~v~~~r~~~~~--~~l~~~g~~~~-~~------~~~~~~~aDivil~ 78 (272)
.|+|.|.|+ |.+|+++++.|++.| + +|.+. +|++++. +.+...++.+. .| ..++++++|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~----~V~~~-~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF----KVRVV-TRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS----EEEEE-ESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc----eEEEE-EcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 578999987 999999999999988 8 99999 8987653 34444565432 12 23457789999998
Q ss_pred eC
Q 024121 79 VK 80 (272)
Q Consensus 79 v~ 80 (272)
..
T Consensus 80 a~ 81 (299)
T 2wm3_A 80 TN 81 (299)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 362
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=96.91 E-value=0.0031 Score=54.07 Aligned_cols=91 Identities=12% Similarity=0.128 Sum_probs=55.9
Q ss_pred CeEEEEcccHHHHHHHHHHHh---C-CCCCCCcEEEEeCC-CHHHHHHHHH----c-----------------C--ceee
Q 024121 11 FILGFIGAGKMAESIAKGVAK---S-GVLPPDRICTAVHS-NLKRRDAFES----I-----------------G--VKVL 62 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~---~-g~~~~~~V~v~~~r-~~~~~~~l~~----~-----------------g--~~~~ 62 (272)
+||||+|.|.+|..+.+.|.+ + .+ +|...+++ +++....+.+ . | +.+.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~----eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~ 78 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEI----TVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVL 78 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTE----EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCE----EEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEE
Confidence 699999999999999999987 4 33 66544254 4555544442 1 1 1121
Q ss_pred --cCchhh-hc--cCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcC
Q 024121 63 --SDNNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 63 --~~~~~~-~~--~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
.++.+. .. ++|+||.|++.....+........ ...++|||..+
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~-GakkVVId~~a 126 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAA-GAKKVLFSHPG 126 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHT-TCSEEEESSCC
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHc-CCCEEEEeccc
Confidence 233332 22 799999999987766666554332 12235776543
No 363
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.91 E-value=0.00046 Score=59.78 Aligned_cols=88 Identities=11% Similarity=0.083 Sum_probs=49.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHHc--CceeecCchhhhcc--------------
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFESI--GVKVLSDNNAVVEY-------------- 71 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~-v~~~r~~~~~~~l~~~--g~~~~~~~~~~~~~-------------- 71 (272)
+++||||||+|.||+.++..+.+...-..-+|. ++ +++... +.+. |+..+.+..+++.+
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~-d~~~~~---~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~ 78 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLA-EAERSL---ISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAH 78 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEE-CSSBEE---ECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHH
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEE-ECChhh---hccccCCCCccccHHHHHhcccCCCCCHHHHHHH
Confidence 457999999999999999999886300001443 45 654321 1111 33322333333322
Q ss_pred ------CCEEEEeeCcccHHHHHHHhchhcCCCCEEEE
Q 024121 72 ------SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVS 103 (272)
Q Consensus 72 ------aDivil~v~~~~~~~v~~~l~~~l~~~~~iis 103 (272)
.|+|+.|+|.......+ ...+..|+-|++
T Consensus 79 ~~~~~~~DvVV~~t~~~~~a~~~---~~AL~aGkhVVt 113 (358)
T 1ebf_A 79 LKTSPKPVILVDNTSSAYIAGFY---TKFVENGISIAT 113 (358)
T ss_dssp HTTCSSCEEEEECSCCHHHHTTH---HHHHHTTCEEEC
T ss_pred hhhccCCcEEEEcCCChHHHHHH---HHHHHCCCeEEe
Confidence 37899998765432222 233557777775
No 364
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.90 E-value=0.0033 Score=53.37 Aligned_cols=66 Identities=18% Similarity=0.341 Sum_probs=47.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHH----HHH----c--CceeecC---chhhhccCCE
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDA----FES----I--GVKVLSD---NNAVVEYSDV 74 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r--~~~~~~~----l~~----~--g~~~~~~---~~~~~~~aDi 74 (272)
|||.|+|+ |.+|++++..|...|+. .++.++ |+ ++++++. +.. . .+.+..+ ..++++++|+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~--~el~L~-Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~ 77 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFM--KDLVLI-GREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDV 77 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTC--CEEEEE-ECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCC--CEEEEE-cCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCE
Confidence 68999999 99999999999988752 368889 98 7654432 222 1 2233321 3677999999
Q ss_pred EEEee
Q 024121 75 VVFSV 79 (272)
Q Consensus 75 vil~v 79 (272)
||++-
T Consensus 78 Vi~~A 82 (313)
T 1hye_A 78 VIITS 82 (313)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99986
No 365
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.90 E-value=0.0017 Score=55.95 Aligned_cols=101 Identities=15% Similarity=0.222 Sum_probs=64.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH--HHHHHHH---cCceeec-CchhhhccCCEEEEeeCcc
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLK--RRDAFES---IGVKVLS-DNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~--~~~~l~~---~g~~~~~-~~~~~~~~aDivil~v~~~ 82 (272)
+.||+|||+ |..|.-|.+.|.++.. .++....+++.. +....-. ....+.. +.++...++|++|+|+|..
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~---~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~ 89 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPE---AKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAG 89 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTT---EEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTT
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCC---cEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcH
Confidence 468999975 9999999999988643 366554233221 1221100 1222221 3344447899999999999
Q ss_pred cHHHHHHHhchhcCCCCEEEEEcCCCC---HHHHHHHhC
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVAAGVK---LKDLQEWTG 118 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~~~~~---~~~l~~~~~ 118 (272)
...++..++ .+..|||.++..- .+..+++.+
T Consensus 90 ~s~~~~~~~-----~g~~VIDlSsdfRl~~~~~y~~~y~ 123 (351)
T 1vkn_A 90 ASYDLVREL-----KGVKIIDLGADFRFDDPGVYREWYG 123 (351)
T ss_dssp HHHHHHTTC-----CSCEEEESSSTTTCSSHHHHHHHHC
T ss_pred HHHHHHHHh-----CCCEEEECChhhhCCchhhhhhhcC
Confidence 888777654 6788999877653 244455654
No 366
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=96.88 E-value=0.0055 Score=52.35 Aligned_cols=92 Identities=14% Similarity=0.109 Sum_probs=58.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHHc--------C--------ce-------eec--C
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFESI--------G--------VK-------VLS--D 64 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r-~~~~~~~l~~~--------g--------~~-------~~~--~ 64 (272)
+||||+|.|.+|.-+.+.|.++.. -+|...+++ +++....+.+. + +. +.. +
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~---veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSD---IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSS---EEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCC---eEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCC
Confidence 589999999999999999887643 255544355 34544444441 1 10 121 2
Q ss_pred chhhh---ccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 65 NNAVV---EYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 65 ~~~~~---~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
+.++- .++|+||.|+|...-.+..+.. +..|..+|++++..
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~---l~~GakvVdlSa~~ 122 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKH---ITAGAKKVVMTGPS 122 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHH---HHTTCSEEEESSCC
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHH---HHCCCEEEEECCCC
Confidence 33321 4799999999988766666543 34566667776654
No 367
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.84 E-value=0.0013 Score=57.06 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=55.5
Q ss_pred CCeEEEEc-ccHHHHHHHHH-HHhCCCCCCCcEEEEeCCCHHH-HHHHHHcCceeec--CchhhhccCCEEEEeeCcccH
Q 024121 10 SFILGFIG-AGKMAESIAKG-VAKSGVLPPDRICTAVHSNLKR-RDAFESIGVKVLS--DNNAVVEYSDVVVFSVKPQVV 84 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~-l~~~g~~~~~~V~v~~~r~~~~-~~~l~~~g~~~~~--~~~~~~~~aDivil~v~~~~~ 84 (272)
|+||+|+| .|.+|..+.+. |.+.++ +...++....++..+ ...+....+.+.. +..+ .+++|+||.|+|....
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~-~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~~s 78 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDF-DAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGDYT 78 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGG-GGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHHHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCC-CeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCchhH
Confidence 36999999 89999999995 444443 112455441333211 1001111222222 2333 5789999999998877
Q ss_pred HHHHHHhchhcCCC--CEEEEEcCC
Q 024121 85 KDVAMQIRPLLSRK--KLLVSVAAG 107 (272)
Q Consensus 85 ~~v~~~l~~~l~~~--~~iis~~~~ 107 (272)
.+..+.+.. .| .+|||.++.
T Consensus 79 ~~~a~~~~~---~G~k~vVID~ss~ 100 (367)
T 1t4b_A 79 NEIYPKLRE---SGWQGYWIDAASS 100 (367)
T ss_dssp HHHHHHHHH---TTCCCEEEECSST
T ss_pred HHHHHHHHH---CCCCEEEEcCChh
Confidence 777766543 34 388987654
No 368
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.83 E-value=0.0013 Score=56.00 Aligned_cols=66 Identities=15% Similarity=0.241 Sum_probs=48.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cC------chhhhccCCEEEEee
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD------NNAVVEYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~------~~~~~~~aDivil~v 79 (272)
++|+|.|.|. |.+|+.+++.|++.|+ +|++. +|++++.+.+...++... .| ..++++++|+||-+.
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a 85 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGH----DLVLI-HRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSA 85 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-ecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 3479999985 9999999999999999 99999 898766554443354321 12 234567899999876
No 369
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.83 E-value=0.0016 Score=59.97 Aligned_cols=96 Identities=11% Similarity=0.100 Sum_probs=63.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecC---c----hhhhccCCEEEEeeCccc
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD---N----NAVVEYSDVVVFSVKPQV 83 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~---~----~~~~~~aDivil~v~~~~ 83 (272)
++|.|+|+|.+|..+++.|.+.|+ +|.+. ++++++.+++. ..+..| . +.-++++|.++.+++++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~----~v~vi-d~d~~~~~~~~---~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~ 420 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV----PFILI-DRQESPVCNDH---VVVYGDATVGQTLRQAGIDRASGIIVTTNDDS 420 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ESSCCSSCCSS---CEEESCSSSSTHHHHHTTTSCSEEEECCSCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC----CEEEE-ECChHHHhhcC---CEEEeCCCCHHHHHhcCccccCEEEEECCCch
Confidence 789999999999999999999999 99999 99988765543 111111 1 122568999999998775
Q ss_pred HHHHHHHhchhcCCC-CEEEEEcCCCCHHHHH
Q 024121 84 VKDVAMQIRPLLSRK-KLLVSVAAGVKLKDLQ 114 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~-~~iis~~~~~~~~~l~ 114 (272)
..-.+..+...+.+. ++|.-..+....+.++
T Consensus 421 ~ni~~~~~ak~l~~~~~iiar~~~~~~~~~l~ 452 (565)
T 4gx0_A 421 TNIFLTLACRHLHSHIRIVARANGEENVDQLY 452 (565)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEESSTTSHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 443333333445566 4444443333334443
No 370
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=96.83 E-value=0.0041 Score=53.29 Aligned_cols=93 Identities=13% Similarity=0.118 Sum_probs=55.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----c-----------------C--cee--ecC
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----I-----------------G--VKV--LSD 64 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r-~~~~~~~l~~----~-----------------g--~~~--~~~ 64 (272)
+||||+|.|.+|+.+.+.|.+++. +.-+|...+++ +++....+.+ . | +.+ ..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~-~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQN-TDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSC-CSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred eEEEEECCCHHHHHHHHHHHhcCC-CCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 699999999999999999987630 11156544255 5555544433 1 1 111 123
Q ss_pred chhhh---ccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEc
Q 024121 65 NNAVV---EYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 65 ~~~~~---~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~ 105 (272)
+.++- .++|+||.|++.....+........ ...++|||..
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~-GakkVVId~~ 124 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQA-GAKKVLITAP 124 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHT-TCSEEEESSC
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHHHHc-CCcEEEEeCC
Confidence 34431 2789999999887666665544322 2233467653
No 371
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=96.82 E-value=0.00065 Score=58.42 Aligned_cols=94 Identities=15% Similarity=0.233 Sum_probs=58.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH-HHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLK-RRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~-~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
+||+||| +|..|.-|.+.|.++.| +..++.....++.. +.-.+......+.....+.+.++|+||.|+|.....+..
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~f-p~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~a 80 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDF-PASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQA 80 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCChHHHHHHH
Confidence 6899999 69999999998888755 32245544133221 100011111222211123457899999999988877777
Q ss_pred HHhchhcCCCCEEEEEcCCC
Q 024121 89 MQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~ 108 (272)
+.+. ..|..|||.++..
T Consensus 81 ~~~~---~~G~~vID~Sa~~ 97 (344)
T 3tz6_A 81 PRFA---AAGVTVIDNSSAW 97 (344)
T ss_dssp HHHH---HTTCEEEECSSTT
T ss_pred HHHH---hCCCEEEECCCcc
Confidence 6654 4677899987653
No 372
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.80 E-value=0.0022 Score=53.79 Aligned_cols=78 Identities=15% Similarity=0.223 Sum_probs=54.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------HHHHHH---HHcCceee-c------Cchhhhcc
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNL-------KRRDAF---ESIGVKVL-S------DNNAVVEY 71 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-------~~~~~l---~~~g~~~~-~------~~~~~~~~ 71 (272)
+|+|.|.|+ |.+|+++++.|++.|+ +|++. +|++ ++.+.+ ...++.+. . +..+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN----PTYAL-VRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC----CEEEE-ECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC----cEEEE-ECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence 478999986 9999999999999999 99999 8876 554433 23465432 1 22456778
Q ss_pred CCEEEEeeCcc---cHHHHHHHhc
Q 024121 72 SDVVVFSVKPQ---VVKDVAMQIR 92 (272)
Q Consensus 72 aDivil~v~~~---~~~~v~~~l~ 92 (272)
+|+||.+.... ....+++...
T Consensus 77 ~d~vi~~a~~~~~~~~~~l~~aa~ 100 (307)
T 2gas_A 77 VDIVICAAGRLLIEDQVKIIKAIK 100 (307)
T ss_dssp CSEEEECSSSSCGGGHHHHHHHHH
T ss_pred CCEEEECCcccccccHHHHHHHHH
Confidence 99999998543 3344554443
No 373
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.80 E-value=0.0039 Score=52.29 Aligned_cols=36 Identities=14% Similarity=0.385 Sum_probs=31.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL 48 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~ 48 (272)
...||.|||+|-+|+.++.+|..+|. .+++++ |.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV---G~i~lv-D~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI---GKLLLF-DYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-CCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC---CEEEEE-CCCc
Confidence 34689999999999999999999997 378888 8765
No 374
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.74 E-value=0.0026 Score=54.27 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=47.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCC---CCCcEEEEeCCCH--HHHH----HHHHc------CceeecCchhhhccC
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVL---PPDRICTAVHSNL--KRRD----AFESI------GVKVLSDNNAVVEYS 72 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~---~~~~V~v~~~r~~--~~~~----~l~~~------g~~~~~~~~~~~~~a 72 (272)
+.|||.|+|. |.+|++++..|.+.|+. ...+|.++ |+++ ++.+ .+... .+....+..++++++
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~-D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~ 81 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLL-EIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDA 81 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE-CCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEE-eCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCC
Confidence 4579999996 99999999999998852 11278999 9874 2222 22211 122223456678899
Q ss_pred CEEEEee
Q 024121 73 DVVVFSV 79 (272)
Q Consensus 73 Divil~v 79 (272)
|+||.+-
T Consensus 82 D~Vih~A 88 (327)
T 1y7t_A 82 DYALLVG 88 (327)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999874
No 375
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.74 E-value=0.0028 Score=53.52 Aligned_cols=79 Identities=13% Similarity=0.130 Sum_probs=54.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH------HHHHHH---HHcCceee-c------Cchhhhcc
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNL------KRRDAF---ESIGVKVL-S------DNNAVVEY 71 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~------~~~~~l---~~~g~~~~-~------~~~~~~~~ 71 (272)
++|+|.|.|. |.+|+++++.|++.|+ +|++. +|++ ++.+.+ ...++.+. . +..+++++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSH----PTFIY-ARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTC----CEEEE-ECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCC----cEEEE-ECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC
Confidence 4578999985 9999999999999999 99999 8875 343333 23455432 1 23456778
Q ss_pred CCEEEEeeCc---ccHHHHHHHhc
Q 024121 72 SDVVVFSVKP---QVVKDVAMQIR 92 (272)
Q Consensus 72 aDivil~v~~---~~~~~v~~~l~ 92 (272)
+|+||.+... .....+++...
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa~ 101 (321)
T 3c1o_A 78 VDIVISALPFPMISSQIHIINAIK 101 (321)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHHH
T ss_pred CCEEEECCCccchhhHHHHHHHHH
Confidence 9999999753 23445555443
No 376
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=96.74 E-value=0.0048 Score=53.54 Aligned_cols=80 Identities=11% Similarity=0.082 Sum_probs=49.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----c-----------------C--cee--ecC
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----I-----------------G--VKV--LSD 64 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r-~~~~~~~l~~----~-----------------g--~~~--~~~ 64 (272)
+||||+|+|.+|..+.+.|.+++. +.-+|...+++ +++....+.+ . | +.+ ..+
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~-~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQN-TDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSS-CSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred cEEEEECcCHHHHHHHHHHhcCCC-CCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 699999999999999999887630 11156544355 4555544443 1 1 111 123
Q ss_pred chhhh---ccCCEEEEeeCcccHHHHHHHh
Q 024121 65 NNAVV---EYSDVVVFSVKPQVVKDVAMQI 91 (272)
Q Consensus 65 ~~~~~---~~aDivil~v~~~~~~~v~~~l 91 (272)
+.++. .++|+||.|++.....+.....
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~h 111 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKH 111 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHHH
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHHH
Confidence 33431 2789999999877665555443
No 377
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.69 E-value=0.0078 Score=55.18 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=29.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN 47 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~ 47 (272)
..||.|||+|.+|+.++.+|...|. .+++++ |.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGV---G~ItLv-D~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFV-DNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC---CEEEEE-CCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEE-CCC
Confidence 4689999999999999999999997 378888 654
No 378
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=96.67 E-value=0.0064 Score=51.98 Aligned_cols=90 Identities=14% Similarity=0.153 Sum_probs=56.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----cC-------------------ceee--c
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----IG-------------------VKVL--S 63 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r-~~~~~~~l~~----~g-------------------~~~~--~ 63 (272)
++||||+|.|.+|.-+.+.|.++.. -+|...+++ +++....+.+ .| +.+. .
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~---veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~ 77 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPD---IEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAER 77 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTT---EEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCC---eEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecC
Confidence 3689999999999999998887632 155544365 4445444442 11 1122 1
Q ss_pred Cchhh-hc--cCCEEEEeeCcccHHHHHHHhchhcCCCC--EEEEEc
Q 024121 64 DNNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVA 105 (272)
Q Consensus 64 ~~~~~-~~--~aDivil~v~~~~~~~v~~~l~~~l~~~~--~iis~~ 105 (272)
++.+. .. ++|+||.|+|...-.+...... ..|. +|||..
T Consensus 78 dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l---~~Gak~vVId~p 121 (334)
T 3cmc_O 78 DPENLAWGEIGVDIVVESTGRFTKREDAAKHL---EAGAKKVIISAP 121 (334)
T ss_dssp SGGGCCTGGGTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred ChhhcCcccCccCEEEECCCchhhHHHHHHHH---HCCCCEEEEeCC
Confidence 33332 12 7999999999887666665543 3344 788754
No 379
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.66 E-value=0.0018 Score=54.60 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=45.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee------ecCchhhhccCCEEEEee
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV------LSDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~------~~~~~~~~~~aDivil~v 79 (272)
+|+|.|.| +|.+|+.++..|++.|+ +|++. +|++.... +. ++.. ..+..++++++|+||-+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a 70 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN----TPIIL-TRSIGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLA 70 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCCC--------CCEEEECCCCHHHHHHHTTTCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC----EEEEE-eCCCCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEcc
Confidence 47899998 59999999999999999 99999 88854443 33 3321 233455677999999886
No 380
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.63 E-value=0.014 Score=52.34 Aligned_cols=88 Identities=17% Similarity=0.246 Sum_probs=62.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--cCcee-ecCc-------hhhhccCCEEEEe
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--IGVKV-LSDN-------NAVVEYSDVVVFS 78 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~--~g~~~-~~~~-------~~~~~~aDivil~ 78 (272)
..++|-|+|.|++|..+|+.|.+ ++ +|.+. .+++++++.+.+ .+..+ ..|. ++-+.++|+++.+
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-~~----~v~iI-E~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~ 307 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-TY----SVKLI-ERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIAL 307 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-TS----EEEEE-ESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred cccEEEEEcchHHHHHHHHHhhh-cC----ceEEE-ecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEc
Confidence 34789999999999999998754 57 99999 999999999887 34333 2221 2336789999999
Q ss_pred eCcccHHHHHHHhchhcCCCCEEE
Q 024121 79 VKPQVVKDVAMQIRPLLSRKKLLV 102 (272)
Q Consensus 79 v~~~~~~~v~~~l~~~l~~~~~ii 102 (272)
+.++...=+...+...+...+++.
T Consensus 308 T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 308 TNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ccCcHHHHHHHHHHHHcCCccccc
Confidence 887765544444444454544443
No 381
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.60 E-value=0.0038 Score=53.59 Aligned_cols=76 Identities=12% Similarity=0.198 Sum_probs=53.0
Q ss_pred CCCCCCCCCCCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH----cCceee-cC------chh
Q 024121 1 MDAFPIPAESFILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES----IGVKVL-SD------NNA 67 (272)
Q Consensus 1 ~~~~~~~~~~~~IgiIG-~G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~----~g~~~~-~~------~~~ 67 (272)
|+....+++.|+|.|.| +|.+|+.+++.|++. |+ .+|+++ +|++.+...+.+ .++... .| ..+
T Consensus 12 ~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~---~~V~~~-~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~ 87 (344)
T 2gn4_A 12 MPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA---KKIIVY-SRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNY 87 (344)
T ss_dssp ----CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC---SEEEEE-ESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH
T ss_pred CccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC---CEEEEE-ECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH
Confidence 45566677788999998 599999999999998 84 289999 999887765543 233321 12 234
Q ss_pred hhccCCEEEEeeC
Q 024121 68 VVEYSDVVVFSVK 80 (272)
Q Consensus 68 ~~~~aDivil~v~ 80 (272)
++++.|+||-+..
T Consensus 88 ~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 88 ALEGVDICIHAAA 100 (344)
T ss_dssp HTTTCSEEEECCC
T ss_pred HHhcCCEEEECCC
Confidence 5678999998863
No 382
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.58 E-value=0.0055 Score=54.82 Aligned_cols=90 Identities=20% Similarity=0.229 Sum_probs=68.5
Q ss_pred CCCCeEEEEccc----HHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc
Q 024121 8 AESFILGFIGAG----KMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 8 ~~~~~IgiIG~G----~mG~~la~~l~~~g-~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~ 82 (272)
.+.++|++||++ ++|..+.++|.+.| + .|+.. |...... .|+.+..+..++.+..|++++++|++
T Consensus 6 ~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~----~v~pV-nP~~~~i-----~G~~~y~sl~~lp~~~Dlavi~vp~~ 75 (457)
T 2csu_A 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKG----KVYPV-NIKEEEV-----QGVKAYKSVKDIPDEIDLAIIVVPKR 75 (457)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSS----EEEEE-CSSCSEE-----TTEECBSSTTSCSSCCSEEEECSCHH
T ss_pred cCCCeEEEECcCCCCCchHHHHHHHHHHcCCC----EEEEE-CCCCCeE-----CCEeccCCHHHcCCCCCEEEEecCHH
Confidence 455789999997 89999999999885 5 88877 6652211 58888888888877899999999999
Q ss_pred cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
.+.+++++.... .. +.++-.+.|++
T Consensus 76 ~~~~~v~e~~~~-Gi-~~vv~~s~G~~ 100 (457)
T 2csu_A 76 FVKDTLIQCGEK-GV-KGVVIITAGFG 100 (457)
T ss_dssp HHHHHHHHHHHH-TC-CEEEECCCSST
T ss_pred HHHHHHHHHHHc-CC-CEEEEecCCCC
Confidence 999998876543 22 34454566764
No 383
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.56 E-value=0.0086 Score=51.17 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=56.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----cC-------------------ceee--cC
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----IG-------------------VKVL--SD 64 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r-~~~~~~~l~~----~g-------------------~~~~--~~ 64 (272)
+||||+|.|.+|.-+.+.|.+++. +.-+|...+++ +++....+.+ .| +.+. .+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~-p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKN-PDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-TTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-CCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 489999999999999999887620 11276655355 4455444442 11 1122 13
Q ss_pred chhh-hc--cCCEEEEeeCcccHHHHHHHhchhcCCCC--EEEEEc
Q 024121 65 NNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVA 105 (272)
Q Consensus 65 ~~~~-~~--~aDivil~v~~~~~~~v~~~l~~~l~~~~--~iis~~ 105 (272)
+.++ .. ++|+||.|+|...-.+..+... ..|. +|||..
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l---~aGakkvVId~~ 122 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHL---QAGAKKVIITAP 122 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHH---HcCCcEEEEeCC
Confidence 3333 22 7999999999887666665543 3344 888754
No 384
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.55 E-value=0.0041 Score=52.04 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=38.2
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES 56 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~ 56 (272)
+..+++.|+| +|-+|.+++..|.+.|+ +|+++ +|++++.+++.+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~----~V~i~-~R~~~~~~~l~~ 161 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA----EVVLC-GRKLDKAQAAAD 161 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC----EEEEE-ECCHHHHHHHHH
Confidence 3567899999 89999999999999998 89999 999888776653
No 385
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.52 E-value=0.0058 Score=55.28 Aligned_cols=69 Identities=20% Similarity=0.279 Sum_probs=52.4
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHcCceeec-CchhhhccCCEEEEe--eCcc
Q 024121 9 ESFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESIGVKVLS-DNNAVVEYSDVVVFS--VKPQ 82 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~-la~~l~~~g~~~~~~V~v~~~r~~-~~~~~l~~~g~~~~~-~~~~~~~~aDivil~--v~~~ 82 (272)
+.++|.|||.|..|.+ +|+.|.+.|+ +|+++ |... ...+.|.+.|+.+.. ...+.+.++|+||+. +|++
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~----~V~~~-D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGY----QISGS-DLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISAD 94 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTC----EEEEE-CSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTT
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCC----eEEEE-ECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCC
Confidence 4578999999999986 9999999999 99999 8754 345667778887642 223446789999987 4554
No 386
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.49 E-value=0.0038 Score=50.47 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=48.7
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCcee-e------cCchhhhccCCEEEE
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKV-L------SDNNAVVEYSDVVVF 77 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-~------~~~~~~~~~aDivil 77 (272)
+++|+|.|.| +|.+|+.+++.|++. |+ +|++. +|++++.+.+ ..++.. . .+..+++++.|+||-
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~----~V~~~-~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 75 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKF----VAKGL-VRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVI 75 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTC----EEEEE-ESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCc----EEEEE-EcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3568899998 599999999999999 78 99999 9998776554 222221 1 123355678999998
Q ss_pred ee
Q 024121 78 SV 79 (272)
Q Consensus 78 ~v 79 (272)
+.
T Consensus 76 ~a 77 (253)
T 1xq6_A 76 LT 77 (253)
T ss_dssp CC
T ss_pred ec
Confidence 75
No 387
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.48 E-value=0.0028 Score=52.53 Aligned_cols=65 Identities=18% Similarity=0.306 Sum_probs=50.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCceee-cC------chhhhccCCEEEEeeC
Q 024121 11 FILGFIGA-GKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD------NNAVVEYSDVVVFSVK 80 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~------~~~~~~~aDivil~v~ 80 (272)
|+|.|.|. |.+|+.+++.|.+. |+ +|++. +|++++.+.+...++... .| ..++++++|+||-+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~----~V~~~-~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS----QIIAI-VRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG----GEEEE-ESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC----eEEEE-EcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 57889986 99999999999998 98 99999 998877766655555432 12 2345678999998864
No 388
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.45 E-value=0.018 Score=49.66 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=30.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN 47 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~ 47 (272)
..+|.|||+|.+|+.++.+|..+|. .+++++ |++
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGv---g~i~lv-D~D 151 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGI---GEIILI-DND 151 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-ECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---CeEEEE-CCC
Confidence 4689999999999999999999997 378888 765
No 389
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.45 E-value=0.0086 Score=49.48 Aligned_cols=64 Identities=16% Similarity=0.330 Sum_probs=48.5
Q ss_pred eEEEEcc-cHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCceee-cC------chhhhccCCEEEEeeC
Q 024121 12 ILGFIGA-GKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD------NNAVVEYSDVVVFSVK 80 (272)
Q Consensus 12 ~IgiIG~-G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~------~~~~~~~aDivil~v~ 80 (272)
||.|.|. |.+|+.+++.|.+. |+ +|++. +|++++.+.+...++... .| ..++++++|+||-+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS----QIVAI-VRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG----GEEEE-ESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc----eEEEE-EcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4788886 99999999999998 88 99999 998877766655555432 12 2345678999998763
No 390
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=96.45 E-value=0.016 Score=47.64 Aligned_cols=88 Identities=15% Similarity=0.179 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cc
Q 024121 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQ 82 (272)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~ 82 (272)
|++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+......+.++... ++
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~~~~~ 71 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGA----KVALV-DWNLEAGVQCKAA-------LHEQFEPQKTLFIQCDVADQQ 71 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HTTTSCGGGEEEEECCTTSHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHhhcCCCceEEEecCCCCHH
Confidence 445567777765 9999999999999999 99999 9998776544320 0000011223333332 34
Q ss_pred cHHHHHHHhchhcCCCCEEEEEcC
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
.+.++++++...+.+=.++|+..+
T Consensus 72 ~v~~~~~~~~~~~g~id~lv~~Ag 95 (267)
T 2gdz_A 72 QLRDTFRKVVDHFGRLDILVNNAG 95 (267)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 566666666544444457787644
No 391
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=96.42 E-value=0.0016 Score=55.86 Aligned_cols=91 Identities=13% Similarity=0.150 Sum_probs=55.9
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH--HcCceeec-CchhhhccCCEEEEeeCcccHHH
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE--SIGVKVLS-DNNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~--~~g~~~~~-~~~~~~~~aDivil~v~~~~~~~ 86 (272)
|||+|+| .|.+|..+.+.|.+.+| +...+....++..+. +.+. ...+.+.. ++.+ . ++|+||.|++.....+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~-~~~~l~~~~s~~~~g-~~l~~~g~~i~v~~~~~~~-~-~~DvV~~a~g~~~s~~ 76 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNF-PLSELRLYASPRSAG-VRLAFRGEEIPVEPLPEGP-L-PVDLVLASAGGGISRA 76 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-CCSCCEEEECGGGSS-CEEEETTEEEEEEECCSSC-C-CCSEEEECSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEeeccccCC-CEEEEcCceEEEEeCChhh-c-CCCEEEECCCccchHH
Confidence 6899999 89999999999987666 333444331221100 0000 01122221 2333 4 8999999998877776
Q ss_pred HHHHhchhcCCCCEEEEEcCCC
Q 024121 87 VAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~~~ 108 (272)
....+. ..|..+|+.++..
T Consensus 77 ~a~~~~---~~G~~vId~s~~~ 95 (331)
T 2yv3_A 77 KALVWA---EGGALVVDNSSAW 95 (331)
T ss_dssp HHHHHH---HTTCEEEECSSSS
T ss_pred HHHHHH---HCCCEEEECCCcc
Confidence 666543 4677899886653
No 392
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.38 E-value=0.0018 Score=56.01 Aligned_cols=67 Identities=12% Similarity=0.159 Sum_probs=49.5
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cCceee-c----C---chhhhccCCEEE
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IGVKVL-S----D---NNAVVEYSDVVV 76 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~-~----~---~~~~~~~aDivi 76 (272)
|++|+|.|.| +|-+|+.++..|++. |+ +|++. +|++++...+.. .++... . + ..++++++|+||
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~----~V~~~-~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vi 96 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDW----EVFGM-DMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVIL 96 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSC----EEEEE-ESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCC----EEEEE-eCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEE
Confidence 4568999998 599999999999998 89 99999 998876655544 344321 1 2 234566899999
Q ss_pred Eee
Q 024121 77 FSV 79 (272)
Q Consensus 77 l~v 79 (272)
-+.
T Consensus 97 h~A 99 (372)
T 3slg_A 97 PLV 99 (372)
T ss_dssp ECB
T ss_pred EcC
Confidence 764
No 393
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=96.37 E-value=0.0092 Score=54.36 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=51.8
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHHHcCceee--cCchhhhccCCEEEEe--eCc
Q 024121 9 ESFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNL--KRRDAFESIGVKVL--SDNNAVVEYSDVVVFS--VKP 81 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~-la~~l~~~g~~~~~~V~v~~~r~~--~~~~~l~~~g~~~~--~~~~~~~~~aDivil~--v~~ 81 (272)
+.++|.|||.|-.|.+ +|+.|.+.|+ +|+++ |.+. ...+.|.+.|+.+. .+.+.+..++|+||+. +|+
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~----~V~~s-D~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~ 92 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGH----TVTGS-DANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKR 92 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCT
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCC----EEEEE-CCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCC
Confidence 3578999999999986 7888899999 99999 8753 34567777888764 2334444679999986 455
Q ss_pred c
Q 024121 82 Q 82 (272)
Q Consensus 82 ~ 82 (272)
+
T Consensus 93 ~ 93 (524)
T 3hn7_A 93 G 93 (524)
T ss_dssp T
T ss_pred C
Confidence 4
No 394
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.36 E-value=0.022 Score=49.03 Aligned_cols=89 Identities=16% Similarity=0.106 Sum_probs=57.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHH----HHHH--cCceee--
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRD----AFES--IGVKVL-- 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-------------------~~~~----~l~~--~g~~~~-- 62 (272)
..+|.|||+|.+|+.++.+|...|. .+++++ |.+. .|++ .+.+ .++.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gv---g~itlv-D~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~ 111 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGV---KGLTML-DHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD 111 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-CCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEE-ECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence 4689999999999999999999997 378887 5431 1333 2333 233321
Q ss_pred -----cCchhhhccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEE
Q 024121 63 -----SDNNAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 63 -----~~~~~~~~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
....+.+.++|+||.|+.....+..+...... .+..+|+.
T Consensus 112 ~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~--~~ip~i~~ 156 (346)
T 1y8q_A 112 TEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHK--NSIKFFTG 156 (346)
T ss_dssp CSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHH--TTCEEEEE
T ss_pred ecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHH--cCCCEEEE
Confidence 12356678899999998665555555544322 34455543
No 395
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.34 E-value=0.03 Score=51.38 Aligned_cols=69 Identities=10% Similarity=0.096 Sum_probs=54.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-Cceee-cCc--hh-----hhccCCEEEEeeC
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-GVKVL-SDN--NA-----VVEYSDVVVFSVK 80 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~-g~~~~-~~~--~~-----~~~~aDivil~v~ 80 (272)
.++|.|+|+|.+|..+++.|.+.|+ +|.+. +.++++.+.+.+. |+.+. .|. .+ -++++|.+++ ++
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~----~vvvi-d~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t~ 200 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNH----LFVVV-TDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-NL 200 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTC----CEEEE-ESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-CS
T ss_pred CCeEEEECCChHHHHHHHHHHHCCC----CEEEE-ECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-eC
Confidence 4679999999999999999999999 99999 9999999888886 76542 221 12 2568999987 55
Q ss_pred cccH
Q 024121 81 PQVV 84 (272)
Q Consensus 81 ~~~~ 84 (272)
++..
T Consensus 201 ~D~~ 204 (565)
T 4gx0_A 201 SDPD 204 (565)
T ss_dssp CHHH
T ss_pred CcHH
Confidence 5443
No 396
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=96.33 E-value=0.024 Score=48.42 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=56.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----c-----------C---------ceee--c
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----I-----------G---------VKVL--S 63 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r-~~~~~~~l~~----~-----------g---------~~~~--~ 63 (272)
+||||+|.|.+|..+.+.|.++++ +..+|...++. +++....+.+ . + +.+. .
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~-p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSS-CSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred eEEEEECCCHHHHHHHHHHHhCCC-CCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 589999999999999999988732 22255544233 3333333332 1 1 0111 2
Q ss_pred Cchhh-hc--cCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEEcCCC
Q 024121 64 DNNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (272)
Q Consensus 64 ~~~~~-~~--~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~~~~~ 108 (272)
++.++ .. ++|+||.|++...-.+..+.. +..|..+|+.++..
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~---l~~Gak~V~iSap~ 125 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKH---LQAGAKKVLITAPG 125 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHH---HHTTCSEEEESSCC
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHH---HHcCCEEEEECCcc
Confidence 33332 23 799999999987766666544 34556666665543
No 397
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=96.25 E-value=0.024 Score=49.32 Aligned_cols=94 Identities=21% Similarity=0.252 Sum_probs=63.5
Q ss_pred CeEEEEcccHHHHHHHH-HHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC------------------ceeecC----chh
Q 024121 11 FILGFIGAGKMAESIAK-GVAKSGVLPPDRICTAVHSNLKRRDAFESIG------------------VKVLSD----NNA 67 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~-~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g------------------~~~~~~----~~~ 67 (272)
||+-.+|+|++|..+.. -|.++|+ +|++. +++....+.+.+.| ++...+ ..+
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g~----~v~f~-dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~ 75 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAGI----QLTFA-DVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVD 75 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHcCC----eEEEE-eCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHH
Confidence 78889999999976655 5567899 99999 99998888887632 111111 123
Q ss_pred hhccCCEEEEeeCcccHHHHHHHhchhc--------CCCCEEEEEcCCCC
Q 024121 68 VVEYSDVVVFSVKPQVVKDVAMQIRPLL--------SRKKLLVSVAAGVK 109 (272)
Q Consensus 68 ~~~~aDivil~v~~~~~~~v~~~l~~~l--------~~~~~iis~~~~~~ 109 (272)
.+.++|+|.+++.++..+.+...|...| .+.-+|++|-+-..
T Consensus 76 ~i~~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~pltilsCeN~~~ 125 (382)
T 3h2z_A 76 LIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIACENMVR 125 (382)
T ss_dssp HHTTCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEEEECCSSTT
T ss_pred HHcCCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEEEECCCccc
Confidence 5668999999998877665554333221 13445778766543
No 398
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=96.23 E-value=0.0055 Score=53.10 Aligned_cols=93 Identities=12% Similarity=0.086 Sum_probs=56.1
Q ss_pred CeEEEEcc-cHHHHHHHH-HHHhCCCCCCCcEEEEeCCCHHH-HHHHHHcCceeecC-chhhhccCCEEEEeeCcccHHH
Q 024121 11 FILGFIGA-GKMAESIAK-GVAKSGVLPPDRICTAVHSNLKR-RDAFESIGVKVLSD-NNAVVEYSDVVVFSVKPQVVKD 86 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~-~l~~~g~~~~~~V~v~~~r~~~~-~~~l~~~g~~~~~~-~~~~~~~aDivil~v~~~~~~~ 86 (272)
|||||||+ |..|.-|.+ -|.++.+ +..++.....++..+ ...+......+... ..+...++|+||.|+|.....+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~-~~~~l~~~ss~~aG~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~ 79 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDF-DLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGGSYTEK 79 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGG-GGSEEEEEESSSTTSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCC-CceEEEEEeccccCcCHHHhCCCceEEEecCChhHhccCCEEEECCChHHHHH
Confidence 68999997 999999999 6666543 122554432544211 11121111222211 1234679999999999888777
Q ss_pred HHHHhchhcCCC--CEEEEEcCC
Q 024121 87 VAMQIRPLLSRK--KLLVSVAAG 107 (272)
Q Consensus 87 v~~~l~~~l~~~--~~iis~~~~ 107 (272)
....+.. .| +.|||.++.
T Consensus 80 ~~~~~~~---~G~k~~VID~ss~ 99 (370)
T 3pzr_A 80 VYPALRQ---AGWKGYWIDAAST 99 (370)
T ss_dssp HHHHHHH---TTCCCEEEECSST
T ss_pred HHHHHHH---CCCCEEEEeCCch
Confidence 7766543 34 488988654
No 399
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=96.22 E-value=0.032 Score=45.05 Aligned_cols=86 Identities=12% Similarity=0.149 Sum_probs=53.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC-----c
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-----P 81 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~-----~ 81 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. ..+ .......++.+. .
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~-~~~~~~~~~~~d~d~~~~ 78 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGA----SVVLL-GRTEASLAEVSDQ-------IKS-AGQPQPLIIALNLENATA 78 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH-TTSCCCEEEECCTTTCCH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-ecCHHHHHHHHHH-------HHh-cCCCCceEEEeccccCCH
Confidence 34456666665 9999999999999999 99999 9998877665431 000 011122222222 2
Q ss_pred ccHHHHHHHhchhcCCCCEEEEEcC
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
+.+.++++++...+.+=.++|+..+
T Consensus 79 ~~~~~~~~~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 79 QQYRELAARVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCc
Confidence 3466666666554444457787643
No 400
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.20 E-value=0.013 Score=50.10 Aligned_cols=68 Identities=12% Similarity=0.070 Sum_probs=48.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH----HHHHHHHH-------cCceee-cC------chhh
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNL----KRRDAFES-------IGVKVL-SD------NNAV 68 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~----~~~~~l~~-------~g~~~~-~~------~~~~ 68 (272)
+++|+|.|.|. |-+|+.++..|++.|+ +|++. +|++ +....+.. .++... .| ..++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 97 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ----VVIGL-DNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV 97 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence 35689999985 9999999999999999 99999 8853 33333332 233321 12 2455
Q ss_pred hccCCEEEEeeC
Q 024121 69 VEYSDVVVFSVK 80 (272)
Q Consensus 69 ~~~aDivil~v~ 80 (272)
++++|+||-+..
T Consensus 98 ~~~~d~Vih~A~ 109 (351)
T 3ruf_A 98 MKGVDHVLHQAA 109 (351)
T ss_dssp TTTCSEEEECCC
T ss_pred hcCCCEEEECCc
Confidence 678999998863
No 401
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.16 E-value=0.015 Score=49.94 Aligned_cols=87 Identities=21% Similarity=0.239 Sum_probs=64.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ecCchhhhccCCEEEEeeCcc-cHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LSDNNAVVEYSDVVVFSVKPQ-VVKD 86 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-~~~~~~~~~~aDivil~v~~~-~~~~ 86 (272)
...+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+++.|+.. ..+.+++.+..|+||-|+... .+..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGA----EVSVF-ARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTC----EEEEE-CSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHHHH
Confidence 45689999999999999888888898 99999 99999998888888642 234344334789999999765 6665
Q ss_pred HHHHhchhcCCCCEEEEE
Q 024121 87 VAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~ 104 (272)
.++- ++++..++.+
T Consensus 251 ~~~~----l~~~G~iv~~ 264 (348)
T 3two_A 251 YLKL----LTYNGDLALV 264 (348)
T ss_dssp HHTT----EEEEEEEEEC
T ss_pred HHHH----HhcCCEEEEE
Confidence 5543 4455566654
No 402
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=96.14 E-value=0.016 Score=52.07 Aligned_cols=65 Identities=25% Similarity=0.276 Sum_probs=49.4
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHcCceeec-CchhhhccCCEEEEe
Q 024121 9 ESFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESIGVKVLS-DNNAVVEYSDVVVFS 78 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~-la~~l~~~g~~~~~~V~v~~~r~~-~~~~~l~~~g~~~~~-~~~~~~~~aDivil~ 78 (272)
..++|.|||.|..|.+ +|+.|.+.|+ +|.++ |... ...+.+.+.|+.+.. ...+.++.+|+|++.
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~G~----~V~~~-D~~~~~~~~~l~~~gi~~~~g~~~~~~~~a~~vv~s 84 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNEGY----QISGS-DIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVS 84 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTC----EEEEE-ESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEEC
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhCCC----EEEEE-CCCCCHHHHHHHhCCCEEECCCCHHHcCCCCEEEEC
Confidence 3578999999999997 9999999999 99999 7754 334566667877642 122345789998886
No 403
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.13 E-value=0.006 Score=50.64 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=31.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL 48 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~ 48 (272)
+.++|.|||+|..|..-++.|++.|+ +|+++ +.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga----~VtVi-ap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGC----KLTLV-SPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTC----EEEEE-EEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCC----EEEEE-cCCC
Confidence 46899999999999999999999999 99999 6643
No 404
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.13 E-value=0.02 Score=51.25 Aligned_cols=80 Identities=15% Similarity=0.251 Sum_probs=55.6
Q ss_pred CCCCCCCCC--CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHH-cCceeecC--chhhhccCCE
Q 024121 1 MDAFPIPAE--SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFES-IGVKVLSD--NNAVVEYSDV 74 (272)
Q Consensus 1 ~~~~~~~~~--~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-~~~~~l~~-~g~~~~~~--~~~~~~~aDi 74 (272)
|.-+|-..+ .++|.|||.|..|..-++.|++.|. +|+++ +.+. +..+.+.+ .++..... ..+.+.++|+
T Consensus 1 m~~~P~~~~l~~~~vlVvGgG~va~~k~~~L~~~ga----~V~vi-~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l 75 (457)
T 1pjq_A 1 MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLEAGA----RLTVN-ALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWL 75 (457)
T ss_dssp CCCEEEEECCBTCEEEEECCSHHHHHHHHHHHHTTB----EEEEE-ESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSE
T ss_pred CCceeeEEECCCCEEEEECCCHHHHHHHHHHHhCcC----EEEEE-cCCCCHHHHHHHhcCCEEEEECCCCccccCCccE
Confidence 445555544 5899999999999999999999999 99999 6643 33444543 34543211 2334678999
Q ss_pred EEEeeCcccHH
Q 024121 75 VVFSVKPQVVK 85 (272)
Q Consensus 75 vil~v~~~~~~ 85 (272)
||.++.+..+.
T Consensus 76 Vi~at~~~~~n 86 (457)
T 1pjq_A 76 AIAATDDDTVN 86 (457)
T ss_dssp EEECCSCHHHH
T ss_pred EEEcCCCHHHH
Confidence 99997655443
No 405
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=96.10 E-value=0.017 Score=52.08 Aligned_cols=65 Identities=22% Similarity=0.279 Sum_probs=49.6
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCHH-HHHHHHHcCceeec-CchhhhccCCEEEEe
Q 024121 9 ESFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNLK-RRDAFESIGVKVLS-DNNAVVEYSDVVVFS 78 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~-la~~l~~~g~~~~~~V~v~~~r~~~-~~~~l~~~g~~~~~-~~~~~~~~aDivil~ 78 (272)
+.++|.|||.|..|.+ +|+.|.+.|+ +|.++ |.... ..+.+.+.|+.+.. ...+.++.+|+||+.
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G~----~V~~~-D~~~~~~~~~l~~~gi~~~~g~~~~~~~~a~~vv~s 85 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEGY----QISGS-DLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVS 85 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTTC----EEEEE-CSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEEC
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCCC----eEEEE-CCCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEEC
Confidence 4578999999999997 9999999999 99999 87543 34566667887642 112345689999886
No 406
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.09 E-value=0.0053 Score=53.31 Aligned_cols=66 Identities=20% Similarity=0.162 Sum_probs=47.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cC------chhhhccCCEEEEee
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD------NNAVVEYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~------~~~~~~~aDivil~v 79 (272)
++|+|.|.|. |.+|+.+++.|++.|+ +|++. +|++.+.......++... .| ..++++++|+||-+.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH----YVIAS-DWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC----eEEEE-ECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 4679999987 9999999999999999 99999 887654322222233321 12 235567899999886
No 407
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=96.07 E-value=0.008 Score=52.22 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=57.3
Q ss_pred CCCeEEEEcc-cHHHHHHHH-HHHhCCCCCCCcEEEEeCCCHHH-HHHHHHcCceeecC-chhhhccCCEEEEeeCcccH
Q 024121 9 ESFILGFIGA-GKMAESIAK-GVAKSGVLPPDRICTAVHSNLKR-RDAFESIGVKVLSD-NNAVVEYSDVVVFSVKPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~-~l~~~g~~~~~~V~v~~~r~~~~-~~~l~~~g~~~~~~-~~~~~~~aDivil~v~~~~~ 84 (272)
..+||||||+ |..|.-|.+ -|.++.+ +..++.....++..+ ...+......+... ..+...++|+||+|+|....
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~-~~~~l~~~ss~~aG~~~~~~~~~~~~v~~~~~~~~~~~vDvvf~a~~~~~s 81 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDF-DLIEPVFFSTSNAGGKAPSFAKNETTLKDATSIDDLKKCDVIITCQGGDYT 81 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGG-GGSEEEEEESSCTTSBCCTTCCSCCBCEETTCHHHHHTCSEEEECSCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCC-CceEEEEEechhcCCCHHHcCCCceEEEeCCChhHhcCCCEEEECCChHHH
Confidence 3579999997 999999999 5555543 122554442443211 11121111222211 12346789999999998887
Q ss_pred HHHHHHhchhcCCC--CEEEEEcCC
Q 024121 85 KDVAMQIRPLLSRK--KLLVSVAAG 107 (272)
Q Consensus 85 ~~v~~~l~~~l~~~--~~iis~~~~ 107 (272)
.+....+. ..| +.|||.++.
T Consensus 82 ~~~~~~~~---~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 82 NDVFPKLR---AAGWNGYWIDAASS 103 (377)
T ss_dssp HHHHHHHH---HTTCCSEEEECSST
T ss_pred HHHHHHHH---HCCCCEEEEeCCcc
Confidence 77777654 344 489988654
No 408
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.02 E-value=0.027 Score=48.56 Aligned_cols=87 Identities=10% Similarity=0.002 Sum_probs=60.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-cC----chhhh------ccCCEEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD----NNAVV------EYSDVVVF 77 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~~----~~~~~------~~aDivil 77 (272)
...+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+++.|+... +. ..+.+ ...|+||-
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid 263 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGA----EVIVT-SSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILE 263 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC----EEEEE-ecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence 45689999999999999988888898 99999 999999888877776422 11 11111 15788888
Q ss_pred eeCcccHHHHHHHhchhcCCCCEEEEE
Q 024121 78 SVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 78 ~v~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
|+....+...++.+ +++..++.+
T Consensus 264 ~~g~~~~~~~~~~l----~~~G~iv~~ 286 (363)
T 3uog_A 264 IAGGAGLGQSLKAV----APDGRISVI 286 (363)
T ss_dssp ETTSSCHHHHHHHE----EEEEEEEEE
T ss_pred CCChHHHHHHHHHh----hcCCEEEEE
Confidence 87765555555443 344455544
No 409
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=95.99 E-value=0.017 Score=42.54 Aligned_cols=78 Identities=12% Similarity=0.152 Sum_probs=49.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceeec--Cchhhhc--cCCEEEEeeCccc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVLS--DNNAVVE--YSDVVVFSVKPQV 83 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~--~~~~~~~--~aDivil~v~~~~ 83 (272)
+.+++.|+|+|..|..++..+.+. |+ ++..+.+.++++.... -.|+.+.. +..+.++ +.|.|++|+|...
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~----~vvg~~d~~~~~~g~~-i~g~pV~g~~~l~~~~~~~~id~viia~~~~~ 77 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEF----HPIAFIDDDRKKHKTT-MQGITIYRPKYLERLIKKHCISTVLLAVPSAS 77 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSE----EEEEEECSCGGGTTCE-ETTEEEECGGGHHHHHHHHTCCEEEECCTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCc----EEEEEEECCcccCCCE-ecCeEEECHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 456899999999999999999875 67 7766547665432110 13555443 3333333 5789999987543
Q ss_pred ---HHHHHHHh
Q 024121 84 ---VKDVAMQI 91 (272)
Q Consensus 84 ---~~~v~~~l 91 (272)
..+++..+
T Consensus 78 ~~~~~~i~~~l 88 (141)
T 3nkl_A 78 QVQKKVIIESL 88 (141)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34555444
No 410
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=95.99 E-value=0.044 Score=47.04 Aligned_cols=80 Identities=20% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEE-eCCCHHHHHHHHH-cCceee-----cCc--------------
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTA-VHSNLKRRDAFES-IGVKVL-----SDN-------------- 65 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~-g~~~~~~V~v~-~~r~~~~~~~l~~-~g~~~~-----~~~-------------- 65 (272)
..+||+|+| +|.||..-..-+.++ .+ +|... +++|.+.+.+..+ .+.+.. .+.
T Consensus 2 ~~k~i~ILGsTGSIG~~tldVi~~~~~~----~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~l 77 (376)
T 3a06_A 2 EERTLVILGATGSIGTQTLDVLKKVKGI----RLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHSI 77 (376)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHSCSE----EEEEEEESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTHH
T ss_pred CcceEEEECCCCHHHHHHHHHHHhCCCe----EEEEEEccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHHH
Confidence 347899999 699999988777775 34 66533 4889888776654 454332 121
Q ss_pred hhhh--ccCCEEEEeeCcc-cHHHHHHHhc
Q 024121 66 NAVV--EYSDVVVFSVKPQ-VVKDVAMQIR 92 (272)
Q Consensus 66 ~~~~--~~aDivil~v~~~-~~~~v~~~l~ 92 (272)
.+++ .++|+|+.+++.. .+...+..+.
T Consensus 78 ~el~~~~~~D~Vv~AivG~aGL~ptlaAi~ 107 (376)
T 3a06_A 78 EEMLEALKPDITMVAVSGFSGLRAVLASLE 107 (376)
T ss_dssp HHHHHHHCCSEEEECCCSTTHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEEEeeCHHHHHHHHHHHH
Confidence 2444 3699999999765 4666666553
No 411
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.98 E-value=0.0045 Score=51.73 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=41.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v 79 (272)
|||.|.|+ |-+|+.+++.|.+.|| +|++. .|++++.+ +.......+.++++|.||=+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~----~V~~l-~R~~~~~~------~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGH----EVTLV-SRKPGPGR------ITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSCCTTE------EEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCCCcCe------eecchhhHhhccCCCEEEEec
Confidence 79999987 9999999999999999 99999 88764310 111011123466788887543
No 412
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=95.98 E-value=0.029 Score=47.87 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=55.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----cC-------------------ceee--cC
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----IG-------------------VKVL--SD 64 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r-~~~~~~~l~~----~g-------------------~~~~--~~ 64 (272)
+||||+|.|.+|+.+.+.|.++.+ +|...++. +++....+.+ .| +.+. .+
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~----evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGV----EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC----CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC----EEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCC
Confidence 489999999999999999887766 77765354 4454444443 22 1121 13
Q ss_pred chhh-hc--cCCEEEEeeCcccHHHHHHHhchhcCCCC--EEEEEc
Q 024121 65 NNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVA 105 (272)
Q Consensus 65 ~~~~-~~--~aDivil~v~~~~~~~v~~~l~~~l~~~~--~iis~~ 105 (272)
+.+. .. ++|+||.|++...-.+..+... ..|. +|||..
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l---~aGakkvVIsap 119 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHL---EGGAKKVIITAP 119 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHH---HCCCCEEEECCC
Confidence 3332 22 6899999998877666655433 3344 777653
No 413
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.97 E-value=0.077 Score=45.45 Aligned_cols=87 Identities=14% Similarity=0.173 Sum_probs=60.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ec-----Cch-hh---h-----ccCC
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LS-----DNN-AV---V-----EYSD 73 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-~~-----~~~-~~---~-----~~aD 73 (272)
...+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+++.|+.. .+ +.. ++ . ...|
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGA----FVVCT-ARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC----EEEEE-cCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCC
Confidence 34689999999999999888888888 88888 99999988888777642 11 111 11 1 2589
Q ss_pred EEEEeeCcc-cHHHHHHHhchhcCCCCEEEEE
Q 024121 74 VVVFSVKPQ-VVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 74 ivil~v~~~-~~~~v~~~l~~~l~~~~~iis~ 104 (272)
+||-++... .+...+. .++++..++.+
T Consensus 243 ~vid~~g~~~~~~~~~~----~l~~~G~iv~~ 270 (352)
T 1e3j_A 243 VTIDCSGNEKCITIGIN----ITRTGGTLMLV 270 (352)
T ss_dssp EEEECSCCHHHHHHHHH----HSCTTCEEEEC
T ss_pred EEEECCCCHHHHHHHHH----HHhcCCEEEEE
Confidence 999998654 3444443 34555666654
No 414
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.95 E-value=0.04 Score=45.10 Aligned_cols=85 Identities=14% Similarity=0.144 Sum_probs=56.1
Q ss_pred CCCeEEEEcc-c-HHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---ccc
Q 024121 9 ESFILGFIGA-G-KMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQV 83 (272)
Q Consensus 9 ~~~~IgiIG~-G-~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~ 83 (272)
+.+++-|.|. | -+|.++++.|.+.|+ +|.+. +|+.++.+++.+. ..+ ....++.++.+. ++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dl~~~~~ 87 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA----DVVIS-DYHERRLGETRDQ-------LAD-LGLGRVEAVVCDVTSTEA 87 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHT-TCSSCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC----EEEEe-cCCHHHHHHHHHH-------HHh-cCCCceEEEEeCCCCHHH
Confidence 3457888898 8 499999999999999 99999 9998877655431 000 112345555443 345
Q ss_pred HHHHHHHhchhcCCCCEEEEEcC
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
++++++++...+.+=.++|+..+
T Consensus 88 v~~~~~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 88 VDALITQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHhCCCcEEEECCC
Confidence 66777766554444457777643
No 415
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=95.95 E-value=0.025 Score=45.91 Aligned_cols=87 Identities=21% Similarity=0.229 Sum_probs=55.8
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---
Q 024121 5 PIPAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK--- 80 (272)
Q Consensus 5 ~~~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~--- 80 (272)
|..++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++...
T Consensus 2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~~ 67 (247)
T 2jah_A 2 PSALQGKVALITGASSGIGEATARALAAEGA----AVAIA-ARRVEKLRALGDE-------LTA--AGAKVHVLELDVAD 67 (247)
T ss_dssp -CTTTTCEEEEESCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTC
T ss_pred CccCCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHh--cCCcEEEEECCCCC
Confidence 34455677777765 9999999999999999 99999 9998876655431 000 12344444432
Q ss_pred cccHHHHHHHhchhcCCCCEEEEEc
Q 024121 81 PQVVKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 81 ~~~~~~v~~~l~~~l~~~~~iis~~ 105 (272)
++.++++++++...+.+=.++|+..
T Consensus 68 ~~~~~~~~~~~~~~~g~id~lv~nA 92 (247)
T 2jah_A 68 RQGVDAAVASTVEALGGLDILVNNA 92 (247)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456666666655444445777654
No 416
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.92 E-value=0.043 Score=45.97 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=54.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccHH
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVVK 85 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~~ 85 (272)
.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++.+. ++.+.
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~d~~~v~ 96 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGA----RLVLS-DVDQPALEQAVNG-------LRG--QGFDAHGVVCDVRHLDEMV 96 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHh--cCCceEEEEccCCCHHHHH
Confidence 456777765 8999999999999999 99999 9998887665431 000 12344444443 33566
Q ss_pred HHHHHhchhcCCCCEEEEEcC
Q 024121 86 DVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~ 106 (272)
++++++.....+=.++|+..+
T Consensus 97 ~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 97 RLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHhCCCCCEEEECCC
Confidence 666666554434457777643
No 417
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.92 E-value=0.051 Score=44.53 Aligned_cols=84 Identities=11% Similarity=0.092 Sum_probs=53.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccHH
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVVK 85 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~~ 85 (272)
.+++-|.| .|-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+.....++.++... ++.++
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v~ 80 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGA----KLSLV-DVSSEGLEASKAA-------VLETAPDAEVLTTVADVSDEAQVE 80 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHHCTTCCEEEEECCTTSHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHhhcCCceEEEEEccCCCHHHHH
Confidence 45666665 59999999999999999 99999 9998776654321 0110112344444432 34566
Q ss_pred HHHHHhchhcCCCCEEEEEc
Q 024121 86 DVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~ 105 (272)
++++++...+.+=.++|+..
T Consensus 81 ~~~~~~~~~~g~id~lv~nA 100 (267)
T 1iy8_A 81 AYVTATTERFGRIDGFFNNA 100 (267)
T ss_dssp HHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 67766655444445777764
No 418
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.88 E-value=0.018 Score=44.99 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=39.1
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV 59 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~ 59 (272)
...++|.|+| +|.+|.++++.+...|. +|++. +|++++.+.+.+.|.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~----~V~~~-~~~~~~~~~~~~~g~ 84 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGA----RIYTT-AGSDAKREMLSRLGV 84 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTC----EEEEE-ESSHHHHHHHHTTCC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCC----EEEEE-eCCHHHHHHHHHcCC
Confidence 3457899999 69999999999999998 99999 999888776665553
No 419
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.87 E-value=0.029 Score=47.89 Aligned_cols=87 Identities=9% Similarity=0.132 Sum_probs=59.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCc-----hhhh----ccCCEEEEee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDN-----NAVV----EYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~-----~~~~----~~aDivil~v 79 (272)
...+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+++.|+...-+. .+.+ ...|+||-++
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGL----NVVAV-DIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC----EEEEE-eCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECC
Confidence 35689999999999999998888998 99999 999999888877776422111 1111 3578888887
Q ss_pred Cc-ccHHHHHHHhchhcCCCCEEEEE
Q 024121 80 KP-QVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 80 ~~-~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
.. ..+...++- ++++..++..
T Consensus 239 g~~~~~~~~~~~----l~~~G~~v~~ 260 (339)
T 1rjw_A 239 VSKPAFQSAYNS----IRRGGACVLV 260 (339)
T ss_dssp CCHHHHHHHHHH----EEEEEEEEEC
T ss_pred CCHHHHHHHHHH----hhcCCEEEEe
Confidence 64 344444433 3444455543
No 420
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.84 E-value=0.041 Score=44.24 Aligned_cols=81 Identities=15% Similarity=0.222 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCC--CCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cc
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSG--VLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQ 82 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g--~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~ 82 (272)
+.++|-|.|. |-+|.++++.|++.| + +|++. +|++++.+.+.+. ...++.++... ++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~----~V~~~-~r~~~~~~~l~~~------------~~~~~~~~~~D~~~~~ 64 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR----HIIAT-ARDVEKATELKSI------------KDSRVHVLPLTVTCDK 64 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCC----EEEEE-ESSGGGCHHHHTC------------CCTTEEEEECCTTCHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCc----EEEEE-ecCHHHHHHHHhc------------cCCceEEEEeecCCHH
Confidence 4567777765 999999999999999 8 99999 9998876655432 12344444432 33
Q ss_pred cHHHHHHHhchhcC--CCCEEEEEcC
Q 024121 83 VVKDVAMQIRPLLS--RKKLLVSVAA 106 (272)
Q Consensus 83 ~~~~v~~~l~~~l~--~~~~iis~~~ 106 (272)
.++++++++...+. +=.++|++.+
T Consensus 65 ~~~~~~~~~~~~~g~~~id~li~~Ag 90 (250)
T 1yo6_A 65 SLDTFVSKVGEIVGSDGLSLLINNAG 90 (250)
T ss_dssp HHHHHHHHHHHHHGGGCCCEEEECCC
T ss_pred HHHHHHHHHHHhcCCCCCcEEEECCc
Confidence 56666666654443 3347777643
No 421
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.84 E-value=0.07 Score=44.71 Aligned_cols=90 Identities=16% Similarity=0.196 Sum_probs=59.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHh-CCCCCCCcEEEEeCCCHHHHHHHHH----cC---cee-ecCchhhh-ccCCEEEE
Q 024121 8 AESFILGFIGAGKMAESIAKGVAK-SGVLPPDRICTAVHSNLKRRDAFES----IG---VKV-LSDNNAVV-EYSDVVVF 77 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~-~g~~~~~~V~v~~~r~~~~~~~l~~----~g---~~~-~~~~~~~~-~~aDivil 77 (272)
....+|..||||..|.+... +.+ .|. +|+.+ |.+++.++..++ .| +++ ..+..+.- ...|+|++
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~-lA~~~ga----~V~gI-Dis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~ 194 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGIL-LSHVYGM----RVNVV-EIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMV 194 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHH-HHHTTCC----EEEEE-ESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEE
T ss_pred CCcCEEEEECCCccHHHHHH-HHHccCC----EEEEE-ECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEE
Confidence 34679999999986533211 222 355 89999 999987765544 24 332 23333322 46899998
Q ss_pred eeCcccHHHHHHHhchhcCCCCEEEE
Q 024121 78 SVKPQVVKDVAMQIRPLLSRKKLLVS 103 (272)
Q Consensus 78 ~v~~~~~~~v~~~l~~~l~~~~~iis 103 (272)
..-......+++++...++||..++-
T Consensus 195 ~a~~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 195 AALAEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp CTTCSCHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCccCHHHHHHHHHHHcCCCcEEEE
Confidence 76555666788888888888887764
No 422
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.80 E-value=0.023 Score=48.80 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=48.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH--HHHHH-cCcee-ecC-------chhhhccCCEEEE
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR--DAFES-IGVKV-LSD-------NNAVVEYSDVVVF 77 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~--~~l~~-~g~~~-~~~-------~~~~~~~aDivil 77 (272)
.|+|.|.|. |.+|+++++.|++.|+ +|++. .|++++. +.+.. .++.. ..| ..++++++|+||.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGH----HVRAQ-VHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTC----CEEEE-ESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC----EEEEE-ECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 578999985 9999999999999999 99999 8887654 44443 24432 123 2345678999998
Q ss_pred eeC
Q 024121 78 SVK 80 (272)
Q Consensus 78 ~v~ 80 (272)
+..
T Consensus 80 ~a~ 82 (352)
T 1xgk_A 80 NTT 82 (352)
T ss_dssp CCC
T ss_pred cCC
Confidence 764
No 423
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=95.80 E-value=0.072 Score=43.44 Aligned_cols=81 Identities=12% Similarity=0.154 Sum_probs=54.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~ 84 (272)
+.+++-|.|. |-+|.++++.|++.|+ +|.+. +|+.++.+++.+. . ..++.++.. .++.+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~----------~--~~~~~~~~~D~~~~~~v 69 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA----TVAIA-DIDIERARQAAAE----------I--GPAAYAVQMDVTRQDSI 69 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH----------H--CTTEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH----------h--CCCceEEEeeCCCHHHH
Confidence 4466777765 9999999999999999 99999 9998877665431 0 112333333 23456
Q ss_pred HHHHHHhchhcCCCCEEEEEcC
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~ 106 (272)
+++++++...+.+=.++|++.+
T Consensus 70 ~~~~~~~~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 70 DAAIAATVEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHHHHHHHHSSSCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 6677766555544457777643
No 424
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.77 E-value=0.056 Score=43.94 Aligned_cols=86 Identities=16% Similarity=0.096 Sum_probs=53.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee-----Cc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV-----KP 81 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v-----~~ 81 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. ..+. ...++.++.+ .+
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~~-~~~~~~~~~~D~~~~~~ 76 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA----TVILL-GRNEEKLRQVASH-------INEE-TGRQPQWFILDLLTCTS 76 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHH-HSCCCEEEECCTTTCCH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHhh-cCCCceEEEEecccCCH
Confidence 34456666665 8999999999999999 99999 9998877665431 0010 0112222222 23
Q ss_pred ccHHHHHHHhchhcCCCCEEEEEcC
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
+.++++++++.....+=.++|+..+
T Consensus 77 ~~~~~~~~~~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 77 ENCQQLAQRIAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHHHHHHHHHHCSCCSEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCc
Confidence 3566677766555444457787643
No 425
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.76 E-value=0.036 Score=45.44 Aligned_cols=86 Identities=10% Similarity=0.120 Sum_probs=57.5
Q ss_pred CCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---c
Q 024121 6 IPAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---P 81 (272)
Q Consensus 6 ~~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~ 81 (272)
..++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++.+. +
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dv~~~ 72 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGA----DLVLA-ARTVERLEDVAKQ-------VTD--TGRRALSVGTDITDD 72 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCH
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCcEEEEEcCCCCH
Confidence 3345566777766 7899999999999999 99999 9998877665431 011 12345555443 3
Q ss_pred ccHHHHHHHhchhcCCCCEEEEEc
Q 024121 82 QVVKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 82 ~~~~~v~~~l~~~l~~~~~iis~~ 105 (272)
+.++++++++...+.+=.++|+..
T Consensus 73 ~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 73 AQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECC
Confidence 456777777665554445788764
No 426
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.72 E-value=0.049 Score=43.83 Aligned_cols=81 Identities=12% Similarity=0.114 Sum_probs=54.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~ 84 (272)
.++++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. +. ..+.++... ++.+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~-----------~~-~~~~~~~~D~~~~~~v 64 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH----QVSMM-GRRYQRLQQQELL-----------LG-NAVIGIVADLAHHEDV 64 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-----------HG-GGEEEEECCTTSHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-----------hc-CCceEEECCCCCHHHH
Confidence 3456777765 8999999999999999 99999 9998877665431 01 123344332 3456
Q ss_pred HHHHHHhchhcCCCCEEEEEcC
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~ 106 (272)
+++++++...+.+=.++|+..+
T Consensus 65 ~~~~~~~~~~~g~id~lvnnAg 86 (235)
T 3l6e_A 65 DVAFAAAVEWGGLPELVLHCAG 86 (235)
T ss_dssp HHHHHHHHHHHCSCSEEEEECC
T ss_pred HHHHHHHHHhcCCCcEEEECCC
Confidence 6777766554444457787643
No 427
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=95.72 E-value=0.053 Score=44.15 Aligned_cols=80 Identities=11% Similarity=0.102 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~ 84 (272)
+.+++-|.|. |-+|.++++.|.+.|+ +|++. +|++++.+.+.+. . ..++.++.+. ++.+
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~----------~--~~~~~~~~~D~~~~~~v 73 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGA----SAVLL-DLPNSGGEAQAKK----------L--GNNCVFAPADVTSEKDV 73 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ECTTSSHHHHHHH----------H--CTTEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC----EEEEE-eCCcHhHHHHHHH----------h--CCceEEEEcCCCCHHHH
Confidence 4467777765 9999999999999999 99999 9987766554331 0 1233343332 3456
Q ss_pred HHHHHHhchhcCCCCEEEEEc
Q 024121 85 KDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~ 105 (272)
+++++++...+.+=.++|++.
T Consensus 74 ~~~~~~~~~~~g~id~li~~A 94 (265)
T 2o23_A 74 QTALALAKGKFGRVDVAVNCA 94 (265)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHCCCCCEEEECC
Confidence 666666654443445777764
No 428
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=95.71 E-value=0.016 Score=48.60 Aligned_cols=64 Identities=14% Similarity=0.183 Sum_probs=38.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhcc--CCEEEEee
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEY--SDVVVFSV 79 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~--aDivil~v 79 (272)
.|+|.|.|. |-+|+.+++.|++.|+ +|++. +|+++... .....+.-..+..+++++ +|+||-+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW----HAVGC-GFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC----EEEEE-C-------------------CHHHHHHHCCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC----eEEEE-ccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence 478999987 9999999999999999 99999 88754311 111111111233445553 89999875
No 429
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=95.70 E-value=0.028 Score=49.78 Aligned_cols=77 Identities=16% Similarity=0.214 Sum_probs=51.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHH----HHH--cCcee--e
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDA----FES--IGVKV--L 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-------------------~~~~~----l~~--~g~~~--~ 62 (272)
..||.|||+|.+|+.++.+|..+|. .+++++ |.+. .|++. +.+ .++.+ .
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGv---g~i~iv-D~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~ 115 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGF---RQIHVI-DMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH 115 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTC---CCEEEE-ECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC---CEEEEE-cCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEE
Confidence 4689999999999999999999997 378777 5421 12322 222 22322 1
Q ss_pred -----cCchhhhccCCEEEEeeCcccHHHHHHH
Q 024121 63 -----SDNNAVVEYSDVVVFSVKPQVVKDVAMQ 90 (272)
Q Consensus 63 -----~~~~~~~~~aDivil~v~~~~~~~v~~~ 90 (272)
....+.++++|+||.|+.....+..+..
T Consensus 116 ~~~i~~~~~~~~~~~DlVi~~~Dn~~~R~~in~ 148 (434)
T 1tt5_B 116 FNKIQDFNDTFYRQFHIIVCGLDSIIARRWING 148 (434)
T ss_dssp ESCGGGBCHHHHTTCSEEEECCSCHHHHHHHHH
T ss_pred ecccchhhHHHhcCCCEEEECCCCHHHHHHHHH
Confidence 1224667889999999866555545444
No 430
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.70 E-value=0.078 Score=43.42 Aligned_cols=86 Identities=14% Similarity=0.076 Sum_probs=55.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---ccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~ 83 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+......+.++... ++.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~~~~~ 73 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA----AVAFC-ARDGERLRAAESA-------LRQRFPGARLFASVCDVLDALQ 73 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHHSTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHHhcCCceEEEEeCCCCCHHH
Confidence 34556666665 8999999999999999 99999 9998877655431 0110112234444432 345
Q ss_pred HHHHHHHhchhcCCCCEEEEEc
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~ 105 (272)
+..+++++...+.+=.++|+..
T Consensus 74 v~~~~~~~~~~~g~id~lvnnA 95 (265)
T 3lf2_A 74 VRAFAEACERTLGCASILVNNA 95 (265)
T ss_dssp HHHHHHHHHHHHCSCSEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 6677777655544445778764
No 431
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=95.69 E-value=0.016 Score=52.68 Aligned_cols=43 Identities=23% Similarity=0.370 Sum_probs=36.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES 56 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~ 56 (272)
..+++.|+|+|-+|.+++..|.+.|. +|+++ +|+.++++.+.+
T Consensus 363 ~~k~vlV~GaGGig~aia~~L~~~G~----~V~i~-~R~~~~a~~la~ 405 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKALAYGAKEKGA----KVVIA-NRTYERALELAE 405 (523)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHHCC-----CEEE-ESSHHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHH
Confidence 45679999999999999999999998 89999 999998887765
No 432
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=95.69 E-value=0.016 Score=49.85 Aligned_cols=44 Identities=11% Similarity=0.087 Sum_probs=36.3
Q ss_pred CCCCCCCCCCCeEEEEcc-cHHHHHHHHHHHh--CCCCCCCcEEEEeCCCHH
Q 024121 1 MDAFPIPAESFILGFIGA-GKMAESIAKGVAK--SGVLPPDRICTAVHSNLK 49 (272)
Q Consensus 1 ~~~~~~~~~~~~IgiIG~-G~mG~~la~~l~~--~g~~~~~~V~v~~~r~~~ 49 (272)
|..++..+++|+|.|.|. |-+|+.++..|++ .|+ +|++. +|++.
T Consensus 1 M~~~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~----~V~~~-~r~~~ 47 (362)
T 3sxp_A 1 MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKA----KVVVL-DKFRS 47 (362)
T ss_dssp CCSSSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTS----EEEEE-ECCCC
T ss_pred CcccchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCC----eEEEE-ECCCc
Confidence 555555566789999965 9999999999999 899 99999 88653
No 433
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.65 E-value=0.026 Score=46.44 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=54.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---ccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~ 83 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. ..+ ...++.++.+. ++.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~d~~~ 67 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA----KILLG-ARRQARIEAIATE-------IRD--AGGTALAQVLDVTDRHS 67 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHH-------HHH--TTCEEEEEECCTTCHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHh--cCCcEEEEEcCCCCHHH
Confidence 34556666665 8999999999999999 99999 9998877665431 001 12233344332 345
Q ss_pred HHHHHHHhchhcCCCCEEEEEc
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~ 105 (272)
++.+++++...+.+=.++|+..
T Consensus 68 v~~~~~~~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 68 VAAFAQAAVDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 6667766655444445777754
No 434
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.61 E-value=0.01 Score=51.51 Aligned_cols=34 Identities=32% Similarity=0.552 Sum_probs=31.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL 48 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~ 48 (272)
.|||.|||+|.-|.++|..|.+.|+ +|.++ +|++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~----~v~v~-Er~~ 34 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI----KVTIY-ERNS 34 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC----CEEEE-ecCC
Confidence 4899999999999999999999999 99999 7754
No 435
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=95.60 E-value=0.11 Score=42.40 Aligned_cols=85 Identities=14% Similarity=0.117 Sum_probs=54.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cc
Q 024121 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQ 82 (272)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~ 82 (272)
.++.+++-|.|. |-+|.++++.|++.|+ +|.+. +|++++.+.+.+. ..+ ...++.++... ++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~ 69 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT----AIALL-DMNREALEKAEAS-------VRE--KGVEARSYVCDVTSEE 69 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHT--TTSCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCcEEEEEecCCCHH
Confidence 345567777765 8999999999999999 99999 9998776654331 000 12234444332 34
Q ss_pred cHHHHHHHhchhcCCCCEEEEEc
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~ 105 (272)
.+..+++++...+.+=.++|+..
T Consensus 70 ~~~~~~~~~~~~~g~id~lv~nA 92 (262)
T 1zem_A 70 AVIGTVDSVVRDFGKIDFLFNNA 92 (262)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHhCCCCEEEECC
Confidence 56666666655444445777764
No 436
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=95.59 E-value=0.025 Score=46.23 Aligned_cols=86 Identities=15% Similarity=0.239 Sum_probs=56.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cc
Q 024121 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQ 82 (272)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~ 82 (272)
.++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. + .+ ...++.++... ++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~------~~--~~~~~~~~~~Dv~~~~ 68 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA----RVVIT-GRTKEKLEEAKLE-I------EQ--FPGQILTVQMDVRNTD 68 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-H------CC--STTCEEEEECCTTCHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-H------Hh--cCCcEEEEEccCCCHH
Confidence 345566766665 8999999999999999 99999 9999887765431 0 00 12244444432 34
Q ss_pred cHHHHHHHhchhcCCCCEEEEEcC
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
.++++++++...+.+=.++|+..+
T Consensus 69 ~v~~~~~~~~~~~g~id~lv~nAg 92 (257)
T 3imf_A 69 DIQKMIEQIDEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 567777776655444457787643
No 437
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=95.58 E-value=0.059 Score=43.97 Aligned_cols=77 Identities=19% Similarity=0.245 Sum_probs=53.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccHHH
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~~~ 86 (272)
++|-|-| .+-||.++++.|.+.|+ +|.+. +|++++.+++.+.+ .++..+.. .++++++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga----~V~~~-~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v~~ 64 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD----KVCFI-DIDEKRSADFAKER-------------PNLFYFHGDVADPLTLKK 64 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHTTC-------------TTEEEEECCTTSHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhc-------------CCEEEEEecCCCHHHHHH
Confidence 4455555 58899999999999999 99999 99988877665432 12333332 3456777
Q ss_pred HHHHhchhcCCCCEEEEEc
Q 024121 87 VAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~ 105 (272)
+++++...+.+=.++|+..
T Consensus 65 ~v~~~~~~~g~iDiLVNNA 83 (247)
T 3ged_A 65 FVEYAMEKLQRIDVLVNNA 83 (247)
T ss_dssp HHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 7777766555545778653
No 438
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.57 E-value=0.059 Score=49.02 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=51.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH---H----------------HHH----HHHHc--Ccee--e
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL---K----------------RRD----AFESI--GVKV--L 62 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~---~----------------~~~----~l~~~--g~~~--~ 62 (272)
..+|.|||+|.+|+.++++|..+|. .+++++ |.+. . |++ .+.+. .+.+ .
T Consensus 32 ~~~VlvvG~GGlGseiak~La~aGV---g~itlv-D~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~v~~~ 107 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGI---GSFTII-DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV 107 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTC---SEEEEE-CCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSBCCEE
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCC---CeEEEE-eCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCeEEEe
Confidence 3689999999999999999999997 378888 7543 1 222 22222 2322 1
Q ss_pred c--------CchhhhccCCEEEEeeCcccHHHHHHHh
Q 024121 63 S--------DNNAVVEYSDVVVFSVKPQVVKDVAMQI 91 (272)
Q Consensus 63 ~--------~~~~~~~~aDivil~v~~~~~~~v~~~l 91 (272)
. +..+.+.+.|+||.|+.....+..+...
T Consensus 108 ~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~ 144 (531)
T 1tt5_A 108 EESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADV 144 (531)
T ss_dssp SSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHH
T ss_pred CCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHH
Confidence 1 2235677899999997655554444443
No 439
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=95.57 E-value=0.073 Score=46.25 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=53.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEE-eCCCHHHHHHHHH-cCceee--cC--------------------
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTA-VHSNLKRRDAFES-IGVKVL--SD-------------------- 64 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~-~~r~~~~~~~l~~-~g~~~~--~~-------------------- 64 (272)
++||+|+|+ |.+|+....-+.++.. ..+|... .+++.+++.+..+ .+.... .+
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~--~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~~ 81 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLD--RYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAA 81 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGG--GEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEE
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcC--cEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEEe
Confidence 478999999 9999999988887531 0144421 3888877655443 343211 11
Q ss_pred ----chhhhc-cCCEEEEeeCcc-cHHHHHHHhchhcCCCCEEEE
Q 024121 65 ----NNAVVE-YSDVVVFSVKPQ-VVKDVAMQIRPLLSRKKLLVS 103 (272)
Q Consensus 65 ----~~~~~~-~aDivil~v~~~-~~~~v~~~l~~~l~~~~~iis 103 (272)
..+++. ..|+|+.+++.. .+..++..+ +.|+.|+.
T Consensus 82 g~~~~~el~~~~iDvVV~ai~G~aGl~ptlaAi----~aGK~Vvl 122 (388)
T 1r0k_A 82 GADALVEAAMMGADWTMAAIIGCAGLKATLAAI----RKGKTVAL 122 (388)
T ss_dssp SHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHH----HTTSEEEE
T ss_pred CccHHHHHHcCCCCEEEEeCCCHHHHHHHHHHH----HCCCEEEE
Confidence 112332 279999998643 455554443 46677774
No 440
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.56 E-value=0.12 Score=45.27 Aligned_cols=93 Identities=11% Similarity=0.097 Sum_probs=61.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCc-----hhh----h--ccCCEEE
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDN-----NAV----V--EYSDVVV 76 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~-----~~~----~--~~aDivi 76 (272)
....+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+...-+. .+. . ...|+||
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vi 287 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGA---SKVILS-EPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFL 287 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC---CEEEEE-CCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEE
Confidence 345689999999999988887777775 268888 999999888888886432111 111 1 2589999
Q ss_pred EeeCcc--cHHHHHHHhchhcCCCCEEEEE
Q 024121 77 FSVKPQ--VVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 77 l~v~~~--~~~~v~~~l~~~l~~~~~iis~ 104 (272)
-|+... .....+..+...++++..++.+
T Consensus 288 d~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 288 EATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp ECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred ECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 998654 3334433331222566666654
No 441
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=95.56 E-value=0.056 Score=43.28 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=52.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcccHHHHH
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~~~~~v~ 88 (272)
.||.+++|+ |+||+.+.+.....++ ++....++... .+ +.++|++|=-+.|+.+.+.+
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~~~----elv~~id~~~~-------------~~----l~~~DVvIDFT~P~a~~~~~ 70 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEKGH----ELVLKVDVNGV-------------EE----LDSPDVVIDFSSPEALPKTV 70 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEEETTEE-------------EE----CSCCSEEEECSCGGGHHHHH
T ss_pred cceeEEEEecCHHHHHHHHHHhCCCC----EEEEEEcCCCc-------------cc----ccCCCEEEECCCHHHHHHHH
Confidence 489999998 9999999886666676 66533265431 11 24789999565666666655
Q ss_pred HHhchhcCCCCEEEEEcCCCCHHHHH
Q 024121 89 MQIRPLLSRKKLLVSVAAGVKLKDLQ 114 (272)
Q Consensus 89 ~~l~~~l~~~~~iis~~~~~~~~~l~ 114 (272)
+.... .+..+|..++|.+.++++
T Consensus 71 ~~~~~---~g~~~ViGTTG~~~~~~~ 93 (228)
T 1vm6_A 71 DLCKK---YRAGLVLGTTALKEEHLQ 93 (228)
T ss_dssp HHHHH---HTCEEEECCCSCCHHHHH
T ss_pred HHHHH---cCCCEEEeCCCCCHHHHH
Confidence 54332 345566566788876543
No 442
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.56 E-value=0.0049 Score=52.37 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=49.3
Q ss_pred CCCCCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--cCcee-ecC------chhhhc--
Q 024121 3 AFPIPAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--IGVKV-LSD------NNAVVE-- 70 (272)
Q Consensus 3 ~~~~~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~--~g~~~-~~~------~~~~~~-- 70 (272)
.-|..++.|+|.|.|+ |-+|+.+++.|++.|+ +|++. +|+......+.+ .++.. ..| ..++++
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~ 87 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGH----EILVI-DNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF 87 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTC----EEEEE-ECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc
Confidence 3466677799999987 9999999999999999 99999 886433211111 13321 111 234566
Q ss_pred cCCEEEEee
Q 024121 71 YSDVVVFSV 79 (272)
Q Consensus 71 ~aDivil~v 79 (272)
++|+||-+.
T Consensus 88 ~~D~vih~A 96 (330)
T 2pzm_A 88 KPTHVVHSA 96 (330)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 899999886
No 443
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=95.56 E-value=0.077 Score=43.08 Aligned_cols=81 Identities=11% Similarity=0.067 Sum_probs=53.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---Cccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~ 83 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. . ..++.++.. .++.
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~----------~--~~~~~~~~~D~~~~~~ 66 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGA----KVAFS-DINEAAGQQLAAE----------L--GERSMFVRHDVSSEAD 66 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHH----------H--CTTEEEECCCTTCHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH----------c--CCceEEEEccCCCHHH
Confidence 45567777765 9999999999999999 99999 9998876655431 0 123333333 2345
Q ss_pred HHHHHHHhchhcCCCCEEEEEc
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~ 105 (272)
++++++++...+.+=.++|++.
T Consensus 67 v~~~~~~~~~~~g~id~lv~~A 88 (253)
T 1hxh_A 67 WTLVMAAVQRRLGTLNVLVNNA 88 (253)
T ss_dssp HHHHHHHHHHHHCSCCEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 6666666654443435777764
No 444
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.56 E-value=0.03 Score=47.78 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=48.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH----HHHHHHH-------cCceee-cC------chhh
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLK----RRDAFES-------IGVKVL-SD------NNAV 68 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~----~~~~l~~-------~g~~~~-~~------~~~~ 68 (272)
+++|+|.|.|+ |-+|+.+++.|++.|+ +|++. +|++. +.+.+.+ .++... .| ..++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 99 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ----KVVGL-DNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA 99 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH
Confidence 35678999987 9999999999999999 99999 88642 3333321 233321 12 2345
Q ss_pred hccCCEEEEeeC
Q 024121 69 VEYSDVVVFSVK 80 (272)
Q Consensus 69 ~~~aDivil~v~ 80 (272)
++++|+||-+..
T Consensus 100 ~~~~d~vih~A~ 111 (352)
T 1sb8_A 100 CAGVDYVLHQAA 111 (352)
T ss_dssp HTTCSEEEECCS
T ss_pred hcCCCEEEECCc
Confidence 678999998864
No 445
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=95.55 E-value=0.1 Score=41.94 Aligned_cols=86 Identities=14% Similarity=0.114 Sum_probs=54.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---Cccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~ 83 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ....++.++.. .++.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~-~~~~~~~~~~~D~~~~~~ 71 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS----TVIIT-GTSGERAKAVAEE-------IAN-KYGVKAHGVEMNLLSEES 71 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHH-------HHH-HHCCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-eCChHHHHHHHHH-------HHh-hcCCceEEEEccCCCHHH
Confidence 34566777765 9999999999999999 99999 9998776654320 000 01223333333 2345
Q ss_pred HHHHHHHhchhcCCCCEEEEEcC
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
++++++++...+.+=.++|++.+
T Consensus 72 ~~~~~~~~~~~~~~~d~vi~~Ag 94 (248)
T 2pnf_A 72 INKAFEEIYNLVDGIDILVNNAG 94 (248)
T ss_dssp HHHHHHHHHHHSSCCSEEEECCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCC
Confidence 66666666554444457777643
No 446
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=95.54 E-value=0.043 Score=45.24 Aligned_cols=82 Identities=11% Similarity=0.061 Sum_probs=51.6
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccHH
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVK 85 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~~ 85 (272)
.+++-|.| .|-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++.+ .++.++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~----~V~~~-~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dv~d~~~v~ 93 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGA----MVIGT-ATTEAGAEGIGAA-------FKQ--AGLEGRGAVLNVNDATAVD 93 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHH-------HHH--HTCCCEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCcEEEEEEeCCCHHHHH
Confidence 34455555 58999999999999999 99999 9998877655431 001 0122223322 234567
Q ss_pred HHHHHhchhcCCCCEEEEEc
Q 024121 86 DVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~ 105 (272)
++++++...+.+=.++|+..
T Consensus 94 ~~~~~~~~~~g~iD~lvnnA 113 (270)
T 3ftp_A 94 ALVESTLKEFGALNVLVNNA 113 (270)
T ss_dssp HHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 77776655544445777764
No 447
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=95.51 E-value=0.054 Score=44.56 Aligned_cols=85 Identities=16% Similarity=0.109 Sum_probs=54.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---ccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~ 83 (272)
+..++|-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++... ++.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dl~~~~~ 94 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS----KLVLW-DINKHGLEETAAK-------CKG--LGAKVHTFVVDCSNRED 94 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-EcCHHHHHHHHHH-------HHh--cCCeEEEEEeeCCCHHH
Confidence 34467777765 9999999999999999 99999 9998776654321 000 02234444432 345
Q ss_pred HHHHHHHhchhcCCCCEEEEEcC
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
+.++++++...+.+=.++|++.+
T Consensus 95 v~~~~~~~~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 95 IYSSAKKVKAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHHHHHHHHHTCCCSEEEECCC
T ss_pred HHHHHHHHHHHCCCCcEEEECCC
Confidence 66666666544444457777643
No 448
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=95.51 E-value=0.023 Score=48.18 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=45.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH---H---HHHH-cCceee-------cCchhhhccCC
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR---D---AFES-IGVKVL-------SDNNAVVEYSD 73 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~---~---~l~~-~g~~~~-------~~~~~~~~~aD 73 (272)
+.|+|.|.| +|-+|+.+++.|++.|+ +|.+. .|++++. . .+.. .++... .+..++++++|
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D 82 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGY----AVNTT-VRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCD 82 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTC----EEEEE-ESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCS
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC----EEEEE-EcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCC
Confidence 367899998 69999999999999999 99987 7765432 1 2211 233321 12345677899
Q ss_pred EEEEee
Q 024121 74 VVVFSV 79 (272)
Q Consensus 74 ivil~v 79 (272)
+||-+.
T Consensus 83 ~Vih~A 88 (338)
T 2rh8_A 83 FVFHVA 88 (338)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999764
No 449
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=95.51 E-value=0.084 Score=43.62 Aligned_cols=79 Identities=16% Similarity=0.128 Sum_probs=52.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccHHH
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~~~ 86 (272)
+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. . ...+.++.+ .++.+++
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-----------~-~~~~~~~~~Dv~d~~~v~~ 90 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGA----YVVVA-DVNEDAAVRVANE-----------I-GSKAFGVRVDVSSAKDAES 90 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHH-----------H-CTTEEEEECCTTCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-----------h-CCceEEEEecCCCHHHHHH
Confidence 45556654 8999999999999999 99999 9998877665542 0 123333333 2345666
Q ss_pred HHHHhchhcCCCCEEEEEcC
Q 024121 87 VAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~ 106 (272)
+++++...+.+=.++|+..+
T Consensus 91 ~~~~~~~~~g~iD~lv~nAg 110 (277)
T 4dqx_A 91 MVEKTTAKWGRVDVLVNNAG 110 (277)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 67666554444457777643
No 450
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=95.51 E-value=0.13 Score=43.72 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=51.8
Q ss_pred CCCCCeEEEEccc--HHHHHHHHHHHhCCCCCCCcEEEEeCCC-----HHHHHHHH----HcC--ceeecCchhhhccCC
Q 024121 7 PAESFILGFIGAG--KMAESIAKGVAKSGVLPPDRICTAVHSN-----LKRRDAFE----SIG--VKVLSDNNAVVEYSD 73 (272)
Q Consensus 7 ~~~~~~IgiIG~G--~mG~~la~~l~~~g~~~~~~V~v~~~r~-----~~~~~~l~----~~g--~~~~~~~~~~~~~aD 73 (272)
..+..||+|+|=| ++..+++..+.+-|. +|++. .+. ++-.+.+. +.| +.++.++.++++++|
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~----~v~~~-~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aD 226 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAAALTGL----DLRLV-APQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGAD 226 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCC----EEEEE-CCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCS
T ss_pred CCCCcEEEEECCCccchHHHHHHHHHHcCC----EEEEE-CCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCC
Confidence 3467899999986 999999999999998 99888 542 22222222 356 556889999999999
Q ss_pred EEEEee
Q 024121 74 VVVFSV 79 (272)
Q Consensus 74 ivil~v 79 (272)
+|..-+
T Consensus 227 vvytd~ 232 (333)
T 1duv_G 227 FIYTDV 232 (333)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 999865
No 451
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=95.50 E-value=0.13 Score=43.74 Aligned_cols=67 Identities=19% Similarity=0.204 Sum_probs=51.4
Q ss_pred CCCCeEEEEccc--HHHHHHHHHHHhCCCCCCCcEEEEeCCC-----HHHHHHHH----HcC--ceeecCchhhhccCCE
Q 024121 8 AESFILGFIGAG--KMAESIAKGVAKSGVLPPDRICTAVHSN-----LKRRDAFE----SIG--VKVLSDNNAVVEYSDV 74 (272)
Q Consensus 8 ~~~~~IgiIG~G--~mG~~la~~l~~~g~~~~~~V~v~~~r~-----~~~~~~l~----~~g--~~~~~~~~~~~~~aDi 74 (272)
.+..||+|+|=| ++..++...+.+-|. +|++. .+. ++-.+.+. +.| +.++.++.++++++|+
T Consensus 153 l~gl~va~vGD~~~~va~Sl~~~~~~~G~----~v~~~-~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDv 227 (335)
T 1dxh_A 153 LHDISYAYLGDARNNMGNSLLLIGAKLGM----DVRIA-APKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDF 227 (335)
T ss_dssp GGGCEEEEESCCSSHHHHHHHHHHHHTTC----EEEEE-CCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSE
T ss_pred cCCeEEEEecCCccchHHHHHHHHHHcCC----EEEEE-CCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCE
Confidence 456899999996 999999999999998 99888 542 22222222 356 5568899999999999
Q ss_pred EEEee
Q 024121 75 VVFSV 79 (272)
Q Consensus 75 vil~v 79 (272)
|..-+
T Consensus 228 vytd~ 232 (335)
T 1dxh_A 228 VHTDV 232 (335)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99865
No 452
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.50 E-value=0.02 Score=49.75 Aligned_cols=95 Identities=9% Similarity=0.116 Sum_probs=65.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------HHHHHHHH------cCceeecCchhhhccCC
Q 024121 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------KRRDAFES------IGVKVLSDNNAVVEYSD 73 (272)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~-------~~~~~l~~------~g~~~~~~~~~~~~~aD 73 (272)
.....||.|+|.|.-|.++++-+...|. .+|+++ |++- ++++.+++ .......++.|+++++|
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga---~~I~v~-D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~AD 260 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGA---TKVTVV-DKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGAD 260 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTC---CEEEEE-ETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCC---CeEEEE-ECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCC
Confidence 4456799999999999999999999886 489999 8752 12222222 11112346889999999
Q ss_pred EEEEeeCcc-cHHHHHHHhchhcCCCCEEEEEcCCCC
Q 024121 74 VVVFSVKPQ-VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (272)
Q Consensus 74 ivil~v~~~-~~~~v~~~l~~~l~~~~~iis~~~~~~ 109 (272)
++|=+..|. .-++++..+ .++.+|+.++++.+
T Consensus 261 V~IG~Sapgl~T~EmVk~M----a~~pIIfalsNPt~ 293 (398)
T 2a9f_A 261 IFIGVSAPGVLKAEWISKM----AARPVIFAMANPIP 293 (398)
T ss_dssp SEEECCSTTCCCHHHHHTS----CSSCEEEECCSSSC
T ss_pred EEEecCCCCCCCHHHHHhh----CCCCEEEECCCCCc
Confidence 977555444 356777665 47889999888764
No 453
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.49 E-value=0.014 Score=49.63 Aligned_cols=67 Identities=12% Similarity=0.119 Sum_probs=46.0
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH---cCceee-cC------chhhhc--
Q 024121 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES---IGVKVL-SD------NNAVVE-- 70 (272)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~----l~~---~g~~~~-~~------~~~~~~-- 70 (272)
++.|+|.|.| +|-+|+++++.|++.|+ +|++. +|++++... +.+ .++... .| ..++++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (341)
T 3enk_A 3 STKGTILVTGGAGYIGSHTAVELLAHGY----DVVIA-DNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAH 77 (341)
T ss_dssp CSSCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-CCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHS
T ss_pred CCCcEEEEecCCcHHHHHHHHHHHHCCC----cEEEE-ecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhcc
Confidence 4567899997 59999999999999999 99999 887544322 221 133321 12 233444
Q ss_pred cCCEEEEee
Q 024121 71 YSDVVVFSV 79 (272)
Q Consensus 71 ~aDivil~v 79 (272)
+.|+||-+.
T Consensus 78 ~~d~vih~A 86 (341)
T 3enk_A 78 PITAAIHFA 86 (341)
T ss_dssp CCCEEEECC
T ss_pred CCcEEEECc
Confidence 789999875
No 454
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=95.49 E-value=0.079 Score=43.10 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=54.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccHH
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVK 85 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~~ 85 (272)
.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. . ..++.++.+ .++.++
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~-----------~-~~~~~~~~~D~~~~~~~~ 71 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGA----KVVIV-DRDKAGAERVAGE-----------I-GDAALAVAADISKEADVD 71 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-----------H-CTTEEEEECCTTSHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHH-----------h-CCceEEEEecCCCHHHHH
Confidence 456777765 8899999999999999 99999 9999887766541 0 123333333 234566
Q ss_pred HHHHHhchhcCCCCEEEEEcC
Q 024121 86 DVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~ 106 (272)
++++++...+.+=.++|++.+
T Consensus 72 ~~~~~~~~~~g~id~li~~Ag 92 (261)
T 3n74_A 72 AAVEAALSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHhcCCCCEEEECCc
Confidence 677666554444457777643
No 455
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=95.49 E-value=0.074 Score=43.23 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=54.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---ccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~ 83 (272)
++.++|-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. +.... ..+.....++.++... ++.
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~D~~~~~~ 77 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGA----TVAAC-DLDRAAAQETVRL-LGGPG-SKEGPPRGNHAAFQADVSEARA 77 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHT-C-------------CCEEEECCTTSHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC----EEEEE-eCChHHHHHHHHH-HHhcC-ccccccCcceEEEEecCCCHHH
Confidence 45567888865 9999999999999999 99999 9998877665431 10000 0000111344444433 334
Q ss_pred HHHHHHHhchhcCCC-CEEEEEcC
Q 024121 84 VKDVAMQIRPLLSRK-KLLVSVAA 106 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~-~~iis~~~ 106 (272)
+.++++++...+.+= .++|++.+
T Consensus 78 ~~~~~~~~~~~~g~i~d~vi~~Ag 101 (264)
T 2pd6_A 78 ARCLLEQVQACFSRPPSVVVSCAG 101 (264)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCCeEEEECCC
Confidence 666666655444332 57787643
No 456
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.48 E-value=0.041 Score=45.59 Aligned_cols=86 Identities=16% Similarity=0.079 Sum_probs=53.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cc
Q 024121 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQ 82 (272)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~ 82 (272)
|++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++.+. ++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~d~~ 86 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGI----AVYGC-ARDAKNVSAAVDG-------LRA--AGHDVDGSSCDVTSTD 86 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHT--TTCCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCcEEEEECCCCCHH
Confidence 333455666665 8999999999999999 99999 9998877655431 000 12344444443 34
Q ss_pred cHHHHHHHhchhcCCCCEEEEEcC
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
.++++++++...+.+=.++|+..+
T Consensus 87 ~v~~~~~~~~~~~g~id~lv~nAg 110 (279)
T 3sju_A 87 EVHAAVAAAVERFGPIGILVNSAG 110 (279)
T ss_dssp HHHHHHHHHHHHHCSCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCcEEEECCC
Confidence 566677766554444457777643
No 457
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=95.48 E-value=0.11 Score=42.66 Aligned_cols=83 Identities=18% Similarity=0.207 Sum_probs=54.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccHHH
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~~~ 86 (272)
+++-|.| .|-+|.++++.|.+.|+ +|.+. +|++++.+++.+. ..+ ....++.++.. .++.+++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dv~~~~~v~~ 87 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGA----RLVLS-GRDVSELDAARRA-------LGE-QFGTDVHTVAIDLAEPDAPAE 87 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH-HHCCCEEEEECCTTSTTHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHH-hcCCcEEEEEecCCCHHHHHH
Confidence 4555555 58999999999999999 99999 9998877655431 001 01234555544 3456777
Q ss_pred HHHHhchhcCCCCEEEEEcC
Q 024121 87 VAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~ 106 (272)
+++++...+.+=.++|+..+
T Consensus 88 ~~~~~~~~~g~id~lv~nAg 107 (266)
T 4egf_A 88 LARRAAEAFGGLDVLVNNAG 107 (266)
T ss_dssp HHHHHHHHHTSCSEEEEECC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 77777655544457887643
No 458
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.47 E-value=0.058 Score=44.11 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=53.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccHHH
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVVKD 86 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~~~ 86 (272)
+++-|.| .|-+|.++++.|++.|+ +|.+. +|++++.+.+.+. ..+ ...++.++.+. ++.+.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~v~~ 95 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGA----RVVLT-ARDVEKLRAVERE-------IVA--AGGEAESHACDLSHSDAIAA 95 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCEEEEEECCTTCHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHH--hCCceeEEEecCCCHHHHHH
Confidence 5566666 49999999999999999 99999 9998877665431 000 12233333332 345666
Q ss_pred HHHHhchhcCCCCEEEEEcC
Q 024121 87 VAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~ 106 (272)
+++++.....+=.++|++.+
T Consensus 96 ~~~~~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 96 FATGVLAAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHhcCCCCEEEECCC
Confidence 77666554444457777643
No 459
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.46 E-value=0.11 Score=44.24 Aligned_cols=44 Identities=11% Similarity=0.264 Sum_probs=34.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHH
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFES 56 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r--~~~~~~~l~~ 56 (272)
.++||||.|.|++|+.+++.+...|. +|...+|+ +.+.+..+.+
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~~v----eivainDp~~d~~~~a~l~~ 51 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEKGV----KVVAVNDPFIDPEYMVYMFK 51 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEEECTTCCHHHHHHHHH
T ss_pred CeeEEEEECCChHHHHHHHHHHhCCC----EEEEEeCCCCChhHhccccc
Confidence 45799999999999999999888876 87765364 5666666655
No 460
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.46 E-value=0.0092 Score=54.17 Aligned_cols=62 Identities=11% Similarity=0.174 Sum_probs=46.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v 79 (272)
+|||.|.| +|.+|+.++..|++.|+ +|++. +|++.+.+.. .....+...+++.++|+||-+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~----~V~~l-~R~~~~~~~v---~~d~~~~~~~~l~~~D~Vih~A 209 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH----EVIQL-VRKEPKPGKR---FWDPLNPASDLLDGADVLVHLA 209 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESSSCCTTCE---ECCTTSCCTTTTTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCCCCccce---eecccchhHHhcCCCCEEEECC
Confidence 68999998 59999999999999999 99999 8887653210 0111123355678899999875
No 461
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.46 E-value=0.035 Score=47.92 Aligned_cols=86 Identities=15% Similarity=0.186 Sum_probs=58.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH---HHHHHHHHcCceeec--Cchhhh----ccCCEEEEeeC
Q 024121 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL---KRRDAFESIGVKVLS--DNNAVV----EYSDVVVFSVK 80 (272)
Q Consensus 10 ~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~---~~~~~l~~~g~~~~~--~~~~~~----~~aDivil~v~ 80 (272)
..+|.|+|+|.+|...++.+...|. +|++. ++++ ++.+.+++.|+...+ +..+.+ ...|+||-++.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga----~Vi~~-~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL----EVWMA-NRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATG 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC----EEEEE-ESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-eCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCC
Confidence 6789999999999999999988998 99999 9988 887777777765431 111111 24788888886
Q ss_pred cc-cH-HHHHHHhchhcCCCCEEEEE
Q 024121 81 PQ-VV-KDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 81 ~~-~~-~~v~~~l~~~l~~~~~iis~ 104 (272)
.. .+ ...+ +.++++..++.+
T Consensus 256 ~~~~~~~~~~----~~l~~~G~iv~~ 277 (366)
T 2cdc_A 256 ADVNILGNVI----PLLGRNGVLGLF 277 (366)
T ss_dssp CCTHHHHHHG----GGEEEEEEEEEC
T ss_pred ChHHHHHHHH----HHHhcCCEEEEE
Confidence 53 33 3333 333444455543
No 462
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.45 E-value=0.13 Score=44.28 Aligned_cols=88 Identities=14% Similarity=0.072 Sum_probs=59.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecC-------chhhhc-----cCCEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD-------NNAVVE-----YSDVVV 76 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~-------~~~~~~-----~aDivi 76 (272)
...+|.|+|+|.+|...++.....|. .+|++. ++++++.+.+++.|+...-+ ..+.+. ..|+||
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~-~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvi 266 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGA---SRIIGV-GTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAV 266 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---CeEEEE-CCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEE
Confidence 45689999999999988887777775 258888 99999988888888642211 112121 579999
Q ss_pred EeeCc-ccHHHHHHHhchhcCCC-CEEEEE
Q 024121 77 FSVKP-QVVKDVAMQIRPLLSRK-KLLVSV 104 (272)
Q Consensus 77 l~v~~-~~~~~v~~~l~~~l~~~-~~iis~ 104 (272)
-|+.. ..+...+ ..++++ ..++.+
T Consensus 267 d~~g~~~~~~~~~----~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 267 ECAGRIETMMNAL----QSTYCGSGVTVVL 292 (373)
T ss_dssp ECSCCHHHHHHHH----HTBCTTTCEEEEC
T ss_pred ECCCCHHHHHHHH----HHHhcCCCEEEEE
Confidence 99864 3344433 334555 556644
No 463
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=95.45 E-value=0.17 Score=42.10 Aligned_cols=85 Identities=11% Similarity=0.164 Sum_probs=54.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~ 84 (272)
+.+++-|.|. |-+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+ ....++.++... ++.+
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dl~~~~~~ 91 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGA----QCVIA-SRKMDVLKATAEQ-------ISS-QTGNKVHAIQCDVRDPDMV 91 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH-HHSSCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHH-hcCCceEEEEeCCCCHHHH
Confidence 4467777765 9999999999999999 99999 9998776554321 000 002344444432 3456
Q ss_pred HHHHHHhchhcCCCCEEEEEcC
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~ 106 (272)
.++++++...+.+=.++|++.+
T Consensus 92 ~~~~~~~~~~~g~id~li~~Ag 113 (302)
T 1w6u_A 92 QNTVSELIKVAGHPNIVINNAA 113 (302)
T ss_dssp HHHHHHHHHHTCSCSEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 6666666544434457777643
No 464
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.45 E-value=0.051 Score=44.20 Aligned_cols=85 Identities=15% Similarity=0.156 Sum_probs=53.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhcc-CCEEEEeeC---ccc
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEY-SDVVVFSVK---PQV 83 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~-aDivil~v~---~~~ 83 (272)
+.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+.... ..+.++.+. .+.
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~~~~~ 73 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY----RVVLI-ARSKQNLEKVHDE-------IMRSNKHVQEPIVLPLDITDCTK 73 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC----EEEEE-ESCHHHHHHHHHH-------HHHHCTTSCCCEEEECCTTCHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHHhccccCcceEEeccCCCHHH
Confidence 4456666665 9999999999999999 99999 9999887665431 0110011 344444443 345
Q ss_pred HHHHHHHhchhcCCCCEEEEEc
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~ 105 (272)
+.++++++...+.+=.++|+..
T Consensus 74 v~~~~~~~~~~~g~iD~lvnnA 95 (250)
T 3nyw_A 74 ADTEIKDIHQKYGAVDILVNAA 95 (250)
T ss_dssp HHHHHHHHHHHHCCEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCEEEECC
Confidence 6666766655443334677653
No 465
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=95.43 E-value=0.19 Score=42.37 Aligned_cols=67 Identities=22% Similarity=0.268 Sum_probs=51.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCC-----HHHHHHHH----HcC--ceeecCchhhhccCCEE
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSN-----LKRRDAFE----SIG--VKVLSDNNAVVEYSDVV 75 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~-----~~~~~~l~----~~g--~~~~~~~~~~~~~aDiv 75 (272)
.+..||+|+|- +++..+++..+.+-|. +|++. .+. ++-.+.+. +.| +.++.++.++++++|+|
T Consensus 153 l~gl~va~vGD~~rva~Sl~~~~~~~g~----~v~~~-~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvv 227 (315)
T 1pvv_A 153 IKGVKVVYVGDGNNVAHSLMIAGTKLGA----DVVVA-TPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVI 227 (315)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHTTC----EEEEE-CCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEE
T ss_pred cCCcEEEEECCCcchHHHHHHHHHHCCC----EEEEE-CCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEE
Confidence 35689999998 8999999999999998 99888 542 22222222 356 55688999999999999
Q ss_pred EEee
Q 024121 76 VFSV 79 (272)
Q Consensus 76 il~v 79 (272)
..-+
T Consensus 228 y~~~ 231 (315)
T 1pvv_A 228 YTDV 231 (315)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9865
No 466
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=95.42 E-value=0.13 Score=42.84 Aligned_cols=89 Identities=12% Similarity=0.201 Sum_probs=55.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~ 84 (272)
+.++|-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. +. ..... ....++.++... ++.+
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-l~--~~~~~-~~~~~~~~~~~D~~~~~~v 87 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGS----NVVIA-SRKLERLKSAADE-LQ--ANLPP-TKQARVIPIQCNIRNEEEV 87 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-HH--HTSCT-TCCCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-HH--hhccc-cCCccEEEEecCCCCHHHH
Confidence 3466777765 9999999999999999 99999 9998776654331 00 00000 012345555443 3456
Q ss_pred HHHHHHhchhcCCCCEEEEEcC
Q 024121 85 KDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~~ 106 (272)
..+++++...+.+=.++|++.+
T Consensus 88 ~~~~~~~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 88 NNLVKSTLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 6666666554444457787644
No 467
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.42 E-value=0.16 Score=43.76 Aligned_cols=88 Identities=15% Similarity=0.137 Sum_probs=59.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecC-------chhhhc-----cCCEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD-------NNAVVE-----YSDVVV 76 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~-------~~~~~~-----~aDivi 76 (272)
...+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+...-+ ..+.+. ..|+||
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga---~~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vi 266 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGA---ARIIGV-DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---CeEEEE-cCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEE
Confidence 45689999999999998888777775 258888 99999988888788642211 112121 479999
Q ss_pred EeeCc-ccHHHHHHHhchhcCCC-CEEEEE
Q 024121 77 FSVKP-QVVKDVAMQIRPLLSRK-KLLVSV 104 (272)
Q Consensus 77 l~v~~-~~~~~v~~~l~~~l~~~-~~iis~ 104 (272)
-|+.. ..+...++ .++++ ..++.+
T Consensus 267 d~~g~~~~~~~~~~----~l~~~~G~iv~~ 292 (374)
T 2jhf_A 267 EVIGRLDTMVTALS----CCQEAYGVSVIV 292 (374)
T ss_dssp ECSCCHHHHHHHHH----HBCTTTCEEEEC
T ss_pred ECCCCHHHHHHHHH----HhhcCCcEEEEe
Confidence 99864 34444443 34555 556644
No 468
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.41 E-value=0.14 Score=41.65 Aligned_cols=86 Identities=21% Similarity=0.237 Sum_probs=54.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---ccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~ 83 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ....++.++... ++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~D~~~~~~ 71 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA----HIVLV-ARQVDRLHEAARS-------LKE-KFGVRVLEVAVDVATPEG 71 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH-HHCCCEEEEECCTTSHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHH-------HHH-hcCCceEEEEcCCCCHHH
Confidence 34566777765 9999999999999999 99999 9998776654321 000 002344444432 345
Q ss_pred HHHHHHHhchhcCCCCEEEEEcC
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
+.++++++...+.+=.++|++.+
T Consensus 72 ~~~~~~~~~~~~g~id~lv~~Ag 94 (263)
T 3ai3_A 72 VDAVVESVRSSFGGADILVNNAG 94 (263)
T ss_dssp HHHHHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 66666666554444457777643
No 469
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.40 E-value=0.046 Score=46.69 Aligned_cols=87 Identities=14% Similarity=0.155 Sum_probs=60.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCceeecCch---h---hhc---cCCEEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNN---A---VVE---YSDVVVF 77 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~---~---~~~---~aDivil 77 (272)
...+|.|+|+|.+|...++.+... |. +|++. ++++++.+.+++.|+...-+.. + .+. ..|+||-
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid 244 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI----TIVGI-SRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAID 244 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC----EEEEE-CSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC----EEEEE-eCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEE
Confidence 457899999999999888877777 88 89999 9999998888877764322211 1 111 5799999
Q ss_pred eeCcc-cHHHHHHHhchhcCCCCEEEEE
Q 024121 78 SVKPQ-VVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 78 ~v~~~-~~~~v~~~l~~~l~~~~~iis~ 104 (272)
|+... .+...++- ++++..++.+
T Consensus 245 ~~g~~~~~~~~~~~----l~~~G~iv~~ 268 (344)
T 2h6e_A 245 LVGTEETTYNLGKL----LAQEGAIILV 268 (344)
T ss_dssp SSCCHHHHHHHHHH----EEEEEEEEEC
T ss_pred CCCChHHHHHHHHH----hhcCCEEEEe
Confidence 98654 44444433 3454555543
No 470
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.39 E-value=0.016 Score=49.28 Aligned_cols=61 Identities=10% Similarity=0.120 Sum_probs=43.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-e------cCchhhhccCCEEEEee
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-L------SDNNAVVEYSDVVVFSV 79 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-~------~~~~~~~~~aDivil~v 79 (272)
.+.|+|.|.|. |-+|+.++..|++.|+ +|++. +|++++ .++.. . .+..++++++|+||-+.
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~----~V~~~-~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGR----TVRGF-DLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTC----CEEEE-ESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCC----EEEEE-eCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 34578999987 9999999999999999 99999 887654 22221 1 12345677899999775
No 471
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.39 E-value=0.036 Score=47.24 Aligned_cols=87 Identities=13% Similarity=0.151 Sum_probs=59.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceee-c----Cchhhh----ccCCEEEEee
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-S----DNNAVV----EYSDVVVFSV 79 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~-~----~~~~~~----~~aDivil~v 79 (272)
...+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+++.|+... + +..+.+ ...|+||.++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL----RVAAV-DIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 45689999999999999988888898 99999 999999988888886422 1 111112 2578888887
Q ss_pred C-cccHHHHHHHhchhcCCCCEEEEE
Q 024121 80 K-PQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 80 ~-~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
. ++.+...+.- ++++..++.+
T Consensus 241 g~~~~~~~~~~~----l~~~G~iv~~ 262 (340)
T 3s2e_A 241 VSPKAFSQAIGM----VRRGGTIALN 262 (340)
T ss_dssp CCHHHHHHHHHH----EEEEEEEEEC
T ss_pred CCHHHHHHHHHH----hccCCEEEEe
Confidence 5 3334444433 4455555543
No 472
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=95.39 E-value=0.043 Score=44.75 Aligned_cols=83 Identities=16% Similarity=0.153 Sum_probs=54.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~ 84 (272)
+.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|+.++.+.+.+. ..+ ...++.++.+. ++.+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dv~d~~~v 76 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA----SVVVT-DLKSEGAEAVAAA-------IRQ--AGGKAIGLECNVTDEQHR 76 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC----EEEEE-ESSHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCcEEEEECCCCCHHHH
Confidence 3455656654 9999999999999999 99999 9998877655431 000 12344444442 3456
Q ss_pred HHHHHHhchhcCCCCEEEEEc
Q 024121 85 KDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~ 105 (272)
+++++++...+.+=.++|+..
T Consensus 77 ~~~~~~~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 77 EAVIKAALDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 677776655554445777764
No 473
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.37 E-value=0.17 Score=43.71 Aligned_cols=88 Identities=16% Similarity=0.087 Sum_probs=58.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecC-------chhhhc-----cCCEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD-------NNAVVE-----YSDVVV 76 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~-------~~~~~~-----~aDivi 76 (272)
...+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+...-+ ..+.+. ..|+||
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~-~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvi 270 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGA---SRIIAI-DINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSL 270 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---CeEEEE-cCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEE
Confidence 35689999999999988887777775 258888 99999988888888642211 112121 479999
Q ss_pred EeeCc-ccHHHHHHHhchhcCCC-CEEEEE
Q 024121 77 FSVKP-QVVKDVAMQIRPLLSRK-KLLVSV 104 (272)
Q Consensus 77 l~v~~-~~~~~v~~~l~~~l~~~-~~iis~ 104 (272)
-|+.. ..+...+ ..++++ ..++.+
T Consensus 271 d~~G~~~~~~~~~----~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 271 DCAGTAQTLKAAV----DCTVLGWGSCTVV 296 (376)
T ss_dssp ESSCCHHHHHHHH----HTBCTTTCEEEEC
T ss_pred ECCCCHHHHHHHH----HHhhcCCCEEEEE
Confidence 98864 3344433 334555 555543
No 474
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.37 E-value=0.014 Score=46.95 Aligned_cols=69 Identities=13% Similarity=0.167 Sum_probs=46.9
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-e------cCchhhhccCCEEEEeeC
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-L------SDNNAVVEYSDVVVFSVK 80 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~-~------~~~~~~~~~aDivil~v~ 80 (272)
+.|+|.|.| +|.+|+++++.|++.|+. .+|++. +|++++.+.+...++.. . .+..+++++.|+||-+..
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~--~~V~~~-~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag 93 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLF--SKVTLI-GRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLG 93 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCC--SEEEEE-ESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCC--CEEEEE-EcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCC
Confidence 457899998 599999999999999861 268888 88876543222222221 1 223455668899998874
No 475
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=95.36 E-value=0.1 Score=42.17 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=55.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---Cccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~ 83 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. . ..++.++.+ .++.
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~----------~--~~~~~~~~~Dv~~~~~ 66 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGA----TVIVS-DINAEGAKAAAAS----------I--GKKARAIAADISDPGS 66 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHH----------H--CTTEEECCCCTTCHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH----------h--CCceEEEEcCCCCHHH
Confidence 35567777765 8999999999999999 99999 9999887665431 0 123333332 2345
Q ss_pred HHHHHHHhchhcCCCCEEEEEcC
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~~ 106 (272)
++++++++...+.+=.++|+..+
T Consensus 67 v~~~~~~~~~~~g~id~lv~nAg 89 (247)
T 3rwb_A 67 VKALFAEIQALTGGIDILVNNAS 89 (247)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHCCCCCEEEECCC
Confidence 67777776655544457777643
No 476
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.36 E-value=0.053 Score=43.94 Aligned_cols=77 Identities=19% Similarity=0.235 Sum_probs=51.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccHHH
Q 024121 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~~~ 86 (272)
+++-|.|. |-+|.++++.|++.|+ +|.+. +|++++.+++.+..- ++.++.. .++.+++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~Dv~~~~~v~~ 64 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGD----KVCFI-DIDEKRSADFAKERP-------------NLFYFHGDVADPLTLKK 64 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHTTCT-------------TEEEEECCTTSHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhcc-------------cCCeEEeeCCCHHHHHH
Confidence 45666665 8999999999999999 99999 999888776654210 1112222 3345677
Q ss_pred HHHHhchhcCCCCEEEEEc
Q 024121 87 VAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~ 105 (272)
+++++...+.+=.++|+..
T Consensus 65 ~~~~~~~~~g~id~lv~nA 83 (247)
T 3dii_A 65 FVEYAMEKLQRIDVLVNNA 83 (247)
T ss_dssp HHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 7777655544445777764
No 477
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=95.36 E-value=0.11 Score=42.19 Aligned_cols=81 Identities=14% Similarity=0.032 Sum_probs=53.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---Cccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~ 83 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. + ..++.++.. .++.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~-----------~~~~~~~~~D~~~~~~ 65 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA----RVVLA-DVLDEEGAATARE-L-----------GDAARYQHLDVTIEED 65 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHT-T-----------GGGEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-h-----------CCceeEEEecCCCHHH
Confidence 35577878876 9999999999999999 99999 9998877665431 0 112333332 2345
Q ss_pred HHHHHHHhchhcCCCCEEEEEc
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~ 105 (272)
++++++++...+.+=.++|+..
T Consensus 66 ~~~~~~~~~~~~g~iD~lv~nA 87 (254)
T 1hdc_A 66 WQRVVAYAREEFGSVDGLVNNA 87 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 6666766655444445777654
No 478
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=95.36 E-value=0.1 Score=43.00 Aligned_cols=85 Identities=11% Similarity=0.193 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~ 84 (272)
+.+++-|.|. |-+|.++++.|++.|+ +|++. +|++++.+.+.+. ..+.-....+.++... ++.+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~v 98 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL----KVVGC-ARTVGNIEELAAE-------CKSAGYPGTLIPYRCDLSNEEDI 98 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHTTCSSEEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-ECChHHHHHHHHH-------HHhcCCCceEEEEEecCCCHHHH
Confidence 3456777755 9999999999999999 99999 9998776654331 0000001223333332 3456
Q ss_pred HHHHHHhchhcCCCCEEEEEc
Q 024121 85 KDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~ 105 (272)
.++++++...+.+=.++|++.
T Consensus 99 ~~~~~~~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 99 LSMFSAIRSQHSGVDICINNA 119 (279)
T ss_dssp HHHHHHHHHHHCCCSEEEECC
T ss_pred HHHHHHHHHhCCCCCEEEECC
Confidence 666666554443435777654
No 479
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.35 E-value=0.11 Score=42.59 Aligned_cols=80 Identities=13% Similarity=0.153 Sum_probs=53.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~ 84 (272)
+.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+++.+. + . .++.++... ++.+
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~----------~-~~~~~~~~D~~~~~~v 67 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA----SLVAV-DREERLLAEAVAA-L----------E-AEAIAVVADVSDPKAV 67 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHT-C----------C-SSEEEEECCTTSHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-h----------c-CceEEEEcCCCCHHHH
Confidence 4566777765 9999999999999999 99999 9998877665431 0 0 233333332 3456
Q ss_pred HHHHHHhchhcCCCCEEEEEc
Q 024121 85 KDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~ 105 (272)
+++++++...+.+=.++|++.
T Consensus 68 ~~~~~~~~~~~g~iD~lvnnA 88 (263)
T 2a4k_A 68 EAVFAEALEEFGRLHGVAHFA 88 (263)
T ss_dssp HHHHHHHHHHHSCCCEEEEGG
T ss_pred HHHHHHHHHHcCCCcEEEECC
Confidence 666666654444445777654
No 480
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.35 E-value=0.05 Score=46.18 Aligned_cols=46 Identities=13% Similarity=0.167 Sum_probs=39.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV 59 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~ 59 (272)
...++.|+|+ |.+|..+++.+...|. +|++. +|++++.+.+++.|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~----~V~~~-~~~~~~~~~~~~~g~ 191 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGC----KVVGA-AGSDEKIAYLKQIGF 191 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHhcCC
Confidence 4578999998 9999999999999998 99999 999988887766664
No 481
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.33 E-value=0.013 Score=52.05 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=48.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH--HHHHHHcCceee-cC-chhhhccCCEEEEee
Q 024121 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKR--RDAFESIGVKVL-SD-NNAVVEYSDVVVFSV 79 (272)
Q Consensus 8 ~~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~--~~~l~~~g~~~~-~~-~~~~~~~aDivil~v 79 (272)
.+.+||.|||.|..|.+.++.|.+.|+ +|+++ |..... ...+. .|+.+. .. ..+.++.+|+|+++.
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~~G~----~v~~~-D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLARGV----TPRVM-DTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASP 72 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHTTTC----CCEEE-ESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECT
T ss_pred CCCCEEEEEeecHHHHHHHHHHHhCCC----EEEEE-ECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCC
Confidence 356789999999999999999999999 99999 764322 13344 577663 22 345566899999874
No 482
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.33 E-value=0.023 Score=50.56 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=71.9
Q ss_pred CCCCeEEEEccc----------HHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--cCceeecCchhhhccCCEE
Q 024121 8 AESFILGFIGAG----------KMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--IGVKVLSDNNAVVEYSDVV 75 (272)
Q Consensus 8 ~~~~~IgiIG~G----------~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~--~g~~~~~~~~~~~~~aDiv 75 (272)
...+||+|+|+- .=...++..|.+.|. +|.+| |.... +...+ .++..+.+..++++++|.|
T Consensus 320 ~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~----~v~~~-DP~~~--~~~~~~~~~~~~~~~~~~~~~~ad~v 392 (446)
T 4a7p_A 320 VRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGA----TVKAY-DPEGV--EQASKMLTDVEFVENPYAAADGADAL 392 (446)
T ss_dssp CTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSC----EEEEE-CSSCH--HHHGGGCSSCCBCSCHHHHHTTBSEE
T ss_pred CCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCC----EEEEE-CCCCC--HhHHHhcCCceEecChhHHhcCCCEE
Confidence 456899999986 557789999999999 99999 87642 22222 2666677888889999999
Q ss_pred EEeeCcccHHHH-HHHhchhcCCCCEEEEEcCCCCHHHHHH
Q 024121 76 VFSVKPQVVKDV-AMQIRPLLSRKKLLVSVAAGVKLKDLQE 115 (272)
Q Consensus 76 il~v~~~~~~~v-~~~l~~~l~~~~~iis~~~~~~~~~l~~ 115 (272)
++++..+.++++ ++.+...+ ...+|+|.-+-++.+.+++
T Consensus 393 vi~t~~~~f~~~d~~~~~~~~-~~~~i~D~r~~~~~~~~~~ 432 (446)
T 4a7p_A 393 VIVTEWDAFRALDLTRIKNSL-KSPVLVDLRNIYPPAELER 432 (446)
T ss_dssp EECSCCTTTTSCCHHHHHTTB-SSCBEECSSCCSCHHHHHH
T ss_pred EEeeCCHHhhcCCHHHHHHhc-CCCEEEECCCCCCHHHHHh
Confidence 999977655432 23344434 3468898877777776654
No 483
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.31 E-value=0.064 Score=45.89 Aligned_cols=88 Identities=13% Similarity=0.056 Sum_probs=59.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecC-----chhhh------ccCCEEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD-----NNAVV------EYSDVVVF 77 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~-----~~~~~------~~aDivil 77 (272)
...+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+...-+ ..+.+ ...|+||-
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga---~~Vi~~-~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGA---YPVIVS-EPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC---CSEEEE-CSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---CEEEEE-CCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 45689999999999999988887775 268889 99999888887777642211 11111 14799999
Q ss_pred eeCc-ccHHHHHHHhchhcCCCCEEEEE
Q 024121 78 SVKP-QVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 78 ~v~~-~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
|+.. ..+...++- ++++..++.+
T Consensus 243 ~~g~~~~~~~~~~~----l~~~G~iv~~ 266 (348)
T 2d8a_A 243 FSGAPKALEQGLQA----VTPAGRVSLL 266 (348)
T ss_dssp CSCCHHHHHHHHHH----EEEEEEEEEC
T ss_pred CCCCHHHHHHHHHH----HhcCCEEEEE
Confidence 8864 444444433 3445556644
No 484
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.31 E-value=0.19 Score=43.28 Aligned_cols=88 Identities=16% Similarity=0.173 Sum_probs=59.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecC-------chhhhc-----cCCEEE
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD-------NNAVVE-----YSDVVV 76 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~-------~~~~~~-----~aDivi 76 (272)
...+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+...-+ ..+.+. ..|+||
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga---~~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vi 267 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGA---KRIIAV-DLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSL 267 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---CEEEEE-cCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEE
Confidence 35689999999999998887777775 258888 99999988888888642211 112221 479999
Q ss_pred EeeCc-ccHHHHHHHhchhcCCC-CEEEEE
Q 024121 77 FSVKP-QVVKDVAMQIRPLLSRK-KLLVSV 104 (272)
Q Consensus 77 l~v~~-~~~~~v~~~l~~~l~~~-~~iis~ 104 (272)
-++.. ..+...+ ..++++ ..++.+
T Consensus 268 d~~g~~~~~~~~~----~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 268 ECVGNVGVMRNAL----ESCLKGWGVSVLV 293 (374)
T ss_dssp ECSCCHHHHHHHH----HTBCTTTCEEEEC
T ss_pred ECCCCHHHHHHHH----HHhhcCCcEEEEE
Confidence 98864 3344333 334555 556544
No 485
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.30 E-value=0.057 Score=43.77 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=53.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccHH
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVVK 85 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~~ 85 (272)
.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++... ++.++
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~ 74 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGA----AVVVA-DINAEAAEAVAKQ-------IVA--DGGTAISVAVDVSDPESAK 74 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCEEEEEECCTTSHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHH-------HHh--cCCcEEEEEccCCCHHHHH
Confidence 456667765 9999999999999999 99999 9998877665431 000 12233344432 34566
Q ss_pred HHHHHhchhcCCCCEEEEEc
Q 024121 86 DVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~ 105 (272)
++++++...+.+=.++|+..
T Consensus 75 ~~~~~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 75 AMADRTLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 77776655544445777764
No 486
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=95.29 E-value=0.018 Score=49.07 Aligned_cols=66 Identities=15% Similarity=0.167 Sum_probs=44.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHH--HHHHHHH---cCceee-cC------chhhhccCCE
Q 024121 10 SFILGFIG-AGKMAESIAKGVAKS--GVLPPDRICTAVHSNLK--RRDAFES---IGVKVL-SD------NNAVVEYSDV 74 (272)
Q Consensus 10 ~~~IgiIG-~G~mG~~la~~l~~~--g~~~~~~V~v~~~r~~~--~~~~l~~---~g~~~~-~~------~~~~~~~aDi 74 (272)
+|+|.|.| +|-+|+.++..|++. |+ +|++. +|++. ..+.+.. .++... .| ..++++++|+
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 78 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDV----HVTVL-DKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADA 78 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTC----EEEEE-ECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCC----EEEEE-eCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCE
Confidence 57899998 599999999999998 88 99998 88642 1111221 233221 12 2355678899
Q ss_pred EEEeeC
Q 024121 75 VVFSVK 80 (272)
Q Consensus 75 vil~v~ 80 (272)
||-+..
T Consensus 79 vih~A~ 84 (348)
T 1oc2_A 79 IVHYAA 84 (348)
T ss_dssp EEECCS
T ss_pred EEECCc
Confidence 998863
No 487
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=95.29 E-value=0.05 Score=44.99 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=54.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccHH
Q 024121 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVVK 85 (272)
Q Consensus 10 ~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~~ 85 (272)
.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++.+. ++.++
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~----~V~~~-~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dl~d~~~v~ 97 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGA----QVAVA-ARHSDALQVVADE-------IAG--VGGKALPIRCDVTQPDQVR 97 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESSGGGGHHHHHH-------HHH--TTCCCEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCeEEEEEcCCCCHHHHH
Confidence 356666665 9999999999999999 99999 9998877665431 001 12233444432 34567
Q ss_pred HHHHHhchhcCCCCEEEEEcC
Q 024121 86 DVAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 86 ~v~~~l~~~l~~~~~iis~~~ 106 (272)
++++++...+.+=.++|+..+
T Consensus 98 ~~~~~~~~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 98 GMLDQMTGELGGIDIAVCNAG 118 (276)
T ss_dssp HHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCC
Confidence 777776655544457777543
No 488
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=95.29 E-value=0.12 Score=41.57 Aligned_cols=82 Identities=11% Similarity=0.103 Sum_probs=53.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeecCchhhhccCCEEEEee---Ccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDivil~v---~~~ 82 (272)
++.++|-|.|. |-+|.++++.|.+.|+ +|++. +|++++.+.+.+ .. ...++.++.. .++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~ 67 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGA----KVMIT-GRHSDVGEKAAKSVG-----------TPDQIQFFQHDSSDED 67 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHC-----------CTTTEEEEECCTTCHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHhh-----------ccCceEEEECCCCCHH
Confidence 35567777765 9999999999999999 99999 999877665433 11 0023333333 234
Q ss_pred cHHHHHHHhchhcCCCCEEEEEc
Q 024121 83 VVKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 83 ~~~~v~~~l~~~l~~~~~iis~~ 105 (272)
.+.++++++...+.+=.++|++.
T Consensus 68 ~~~~~~~~~~~~~~~id~li~~A 90 (251)
T 1zk4_A 68 GWTKLFDATEKAFGPVSTLVNNA 90 (251)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHHHhCCCCEEEECC
Confidence 56666766655444445777764
No 489
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.29 E-value=0.067 Score=43.83 Aligned_cols=80 Identities=11% Similarity=0.067 Sum_probs=54.4
Q ss_pred eEEEE--cccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccHHH
Q 024121 12 ILGFI--GAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (272)
Q Consensus 12 ~IgiI--G~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~~~ 86 (272)
|+.+| |.+-||.++++.|.+.|. +|.+. +|++++.++..+. ..+ ...++..+.+ .++++++
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga----~Vvi~-~~~~~~~~~~~~~-------l~~--~g~~~~~~~~Dv~~~~~v~~ 75 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGA----RVILN-DIRATLLAESVDT-------LTR--KGYDAHGVAFDVTDELAIEA 75 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEC-CSCHHHHHHHHHH-------HHH--TTCCEEECCCCTTCHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHh--cCCcEEEEEeeCCCHHHHHH
Confidence 56677 568899999999999999 99999 9998877655430 000 1223333333 3456788
Q ss_pred HHHHhchhcCCCCEEEEEc
Q 024121 87 VAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~ 105 (272)
+++++...+.+=.++|+..
T Consensus 76 ~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 76 AFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp HHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHCCCCcEEEECC
Confidence 8888776655545778653
No 490
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=95.27 E-value=0.12 Score=42.42 Aligned_cols=80 Identities=16% Similarity=0.178 Sum_probs=52.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---Cccc
Q 024121 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (272)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~ 83 (272)
++.+++-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+.- . .+.++.. .++.
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~-----------~--~~~~~~~Dv~d~~~ 68 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGA----RVVIC-DKDESGGRALEQEL-----------P--GAVFILCDVTQEDD 68 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHC-----------T--TEEEEECCTTSHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHh-----------c--CCeEEEcCCCCHHH
Confidence 35567777765 9999999999999999 99999 99988776654310 0 1222222 2345
Q ss_pred HHHHHHHhchhcCCCCEEEEEc
Q 024121 84 VKDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 84 ~~~v~~~l~~~l~~~~~iis~~ 105 (272)
++++++++...+.+=.++|++.
T Consensus 69 v~~~~~~~~~~~g~iD~lv~nA 90 (270)
T 1yde_A 69 VKTLVSETIRRFGRLDCVVNNA 90 (270)
T ss_dssp HHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECC
Confidence 6666666554444445777664
No 491
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.27 E-value=0.039 Score=47.63 Aligned_cols=87 Identities=14% Similarity=0.187 Sum_probs=60.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH-HcCceee-c--Cc---hhhhccCCEEEEeeCc
Q 024121 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE-SIGVKVL-S--DN---NAVVEYSDVVVFSVKP 81 (272)
Q Consensus 9 ~~~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~-~~g~~~~-~--~~---~~~~~~aDivil~v~~ 81 (272)
...+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+. +.|+... + +. .+.....|+||-++..
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga----~Vi~~-~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGS----KVTVI-STSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 35689999999999999998888898 99999 99988887776 5775422 1 11 1223467999999864
Q ss_pred c-cHHHHHHHhchhcCCCCEEEEE
Q 024121 82 Q-VVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 82 ~-~~~~v~~~l~~~l~~~~~iis~ 104 (272)
. .+...++.+ +++..++.+
T Consensus 262 ~~~~~~~~~~l----~~~G~iv~~ 281 (366)
T 1yqd_A 262 VHPLLPLFGLL----KSHGKLILV 281 (366)
T ss_dssp CCCSHHHHHHE----EEEEEEEEC
T ss_pred HHHHHHHHHHH----hcCCEEEEE
Confidence 3 566655444 344455544
No 492
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.26 E-value=0.038 Score=47.64 Aligned_cols=72 Identities=19% Similarity=0.125 Sum_probs=51.2
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecC-----chhhh-----ccCCEEEE
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD-----NNAVV-----EYSDVVVF 77 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~-----~~~~~-----~~aDivil 77 (272)
...+|.|+| +|.+|...++.+...|. +|++. ++++++.+.+++.|+...-+ ..+.+ ...|+||-
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga----~Vi~~-~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKC----HVIGT-CSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEE
Confidence 456899999 79999999999888998 99999 99998888887777542211 11111 14677777
Q ss_pred eeCcccHH
Q 024121 78 SVKPQVVK 85 (272)
Q Consensus 78 ~v~~~~~~ 85 (272)
|+....+.
T Consensus 238 ~~g~~~~~ 245 (362)
T 2c0c_A 238 SVGGAMFD 245 (362)
T ss_dssp CSCTHHHH
T ss_pred CCCHHHHH
Confidence 77543333
No 493
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=95.24 E-value=0.017 Score=49.04 Aligned_cols=64 Identities=13% Similarity=0.113 Sum_probs=46.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cCceee-c---C----chhhhccCCEEEEee
Q 024121 11 FILGFIGA-GKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IGVKVL-S---D----NNAVVEYSDVVVFSV 79 (272)
Q Consensus 11 ~~IgiIG~-G~mG~~la~~l~~~-g~~~~~~V~v~~~r~~~~~~~l~~-~g~~~~-~---~----~~~~~~~aDivil~v 79 (272)
|+|.|.|+ |-+|+.+++.|++. |+ +|++. +|++++.+.+.. .++... . + ..++++++|+||-+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A 75 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY----EVYGL-DIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC----EEEEE-ESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC----EEEEE-eCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence 58999987 99999999999998 88 99999 898766544332 233321 1 1 223556899999764
No 494
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=95.24 E-value=0.058 Score=43.80 Aligned_cols=83 Identities=16% Similarity=0.162 Sum_probs=52.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeC---cccH
Q 024121 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQVV 84 (272)
Q Consensus 9 ~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~---~~~~ 84 (272)
+.++|-|.|. |-+|.++++.|.+.|+ +|.+. +|++++.+.+.+. ..+ ...++.++... ++.+
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~D~~~~~~~ 77 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA----RVIIA-DLDEAMATKAVED-------LRM--EGHDVSSVVMDVTNTESV 77 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCceEEEEecCCCHHHH
Confidence 3466777765 9999999999999999 99999 9998766544320 000 12234344332 3356
Q ss_pred HHHHHHhchhcCCCCEEEEEc
Q 024121 85 KDVAMQIRPLLSRKKLLVSVA 105 (272)
Q Consensus 85 ~~v~~~l~~~l~~~~~iis~~ 105 (272)
+++++++.....+=.++|++.
T Consensus 78 ~~~~~~~~~~~~~id~vi~~A 98 (260)
T 3awd_A 78 QNAVRSVHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 666666544443334677664
No 495
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.22 E-value=0.087 Score=46.72 Aligned_cols=89 Identities=15% Similarity=0.106 Sum_probs=61.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCch-------------------
Q 024121 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNN------------------- 66 (272)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~------------------- 66 (272)
.....+|.|+|+ |.+|...++.+...|. +|++. .+++++.+.+++.|+...-+..
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga----~vi~~-~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGG----IPVAV-VSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETG 292 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC----EEEEE-eCCHHHHHHHHhcCCCEEEecccccccccccccccccchhh
Confidence 334578999998 9999999998888998 89888 8999999888887764221111
Q ss_pred ----h----h-hccCCEEEEeeCcccHHHHHHHhchhcCCCCEEEEE
Q 024121 67 ----A----V-VEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 67 ----~----~-~~~aDivil~v~~~~~~~v~~~l~~~l~~~~~iis~ 104 (272)
+ . -...|+||-|+....+...+ ..++++..++.+
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~----~~l~~~G~iv~~ 335 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTGRVTFGLSV----IVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSCHHHHHHHH----HHSCTTCEEEES
T ss_pred hHHHHHHHHHhCCCceEEEECCCchHHHHHH----HHHhcCCEEEEE
Confidence 1 0 12589999988654333333 345566666654
No 496
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.19 E-value=0.028 Score=46.88 Aligned_cols=69 Identities=19% Similarity=0.293 Sum_probs=53.6
Q ss_pred CCCCeEEEEcc---cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEeeCcc
Q 024121 8 AESFILGFIGA---GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ 82 (272)
Q Consensus 8 ~~~~~IgiIG~---G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v~~~ 82 (272)
.+..||+|+|- +++..+++..+.+-|. +|++. .+..-....+.+.|+.++.++.++++++|+|.. +-.+
T Consensus 144 l~gl~va~vGDl~~~rva~Sl~~~~~~~g~----~v~~~-~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~q 215 (291)
T 3d6n_B 144 VKDLRVLYVGDIKHSRVFRSGAPLLNMFGA----KIGVC-GPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRLQ 215 (291)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHHTTC----EEEEE-SCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCCC
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHHCCC----EEEEE-CCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCcc
Confidence 35689999997 8999999999999998 99988 543211112334578888999999999999999 7543
No 497
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.19 E-value=0.078 Score=47.44 Aligned_cols=98 Identities=10% Similarity=0.071 Sum_probs=66.6
Q ss_pred CCCCeEEEEccc----------HHHHHHHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHH---------H--cCceeecC
Q 024121 8 AESFILGFIGAG----------KMAESIAKGVAKSGVLPPDRICTAVHSNL--KRRDAFE---------S--IGVKVLSD 64 (272)
Q Consensus 8 ~~~~~IgiIG~G----------~mG~~la~~l~~~g~~~~~~V~v~~~r~~--~~~~~l~---------~--~g~~~~~~ 64 (272)
.+.+||+|+|+- .-...++..|.+.|. +|.+| |..- +...... . .++..+.+
T Consensus 327 ~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~----~v~~~-DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (467)
T 2q3e_A 327 VTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGA----HLHIY-DPKVPREQIVVDLSHPGVSEDDQVSRLVTISKD 401 (467)
T ss_dssp CTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTC----EEEEE-CSSSCHHHHHHHHCC------CHHHHHEEECSS
T ss_pred cCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCC----EEEEE-cCccCHHHHhhhhccccccccccccCceeecCC
Confidence 356899999985 367789999999998 99999 8852 2221111 0 13555667
Q ss_pred chhhhccCCEEEEeeCcccHHHH-HHHhchhcCCCCEEEEEcCCCCH
Q 024121 65 NNAVVEYSDVVVFSVKPQVVKDV-AMQIRPLLSRKKLLVSVAAGVKL 110 (272)
Q Consensus 65 ~~~~~~~aDivil~v~~~~~~~v-~~~l~~~l~~~~~iis~~~~~~~ 110 (272)
..++++++|.|++++..+.++++ ++.+...++...+|+|.-+-+..
T Consensus 402 ~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~ 448 (467)
T 2q3e_A 402 PYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDG 448 (467)
T ss_dssp HHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCTTTT
T ss_pred HHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCcCCc
Confidence 78889999999999987766532 23444444444458887665554
No 498
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.17 E-value=0.02 Score=45.88 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=30.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH
Q 024121 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL 48 (272)
Q Consensus 11 ~~IgiIG~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~ 48 (272)
..|.|||+|.-|.+.|..|.++|+ +|+++ ++.+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~----~V~v~-Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH----QVHLF-DKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC----CEEEE-ECCC
Confidence 459999999999999999999999 99999 8754
No 499
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=95.17 E-value=0.11 Score=41.44 Aligned_cols=78 Identities=15% Similarity=0.132 Sum_probs=50.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCchhhhccCCEEEEee---CcccHHH
Q 024121 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (272)
Q Consensus 11 ~~IgiIG-~G~mG~~la~~l~~~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDivil~v---~~~~~~~ 86 (272)
++|-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+.+.+. +. ++.++.. .++.+.+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~-----------~~--~~~~~~~D~~~~~~~~~ 67 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGY----RVGLM-ARDEKRLQALAAE-----------LE--GALPLPGDVREEGDWAR 67 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-----------ST--TCEEEECCTTCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-----------hh--hceEEEecCCCHHHHHH
Confidence 4577775 59999999999999999 99999 9998776655431 00 1222222 2345666
Q ss_pred HHHHhchhcCCCCEEEEEcC
Q 024121 87 VAMQIRPLLSRKKLLVSVAA 106 (272)
Q Consensus 87 v~~~l~~~l~~~~~iis~~~ 106 (272)
+++++...+.+=.++|++.+
T Consensus 68 ~~~~~~~~~~~id~li~~Ag 87 (234)
T 2ehd_A 68 AVAAMEEAFGELSALVNNAG 87 (234)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 66665544433347777643
No 500
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.16 E-value=0.11 Score=44.86 Aligned_cols=87 Identities=14% Similarity=0.201 Sum_probs=58.2
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHh-CCCCCCCcEEEEeCCCHHHHHHHHHcCceeecCc----hhhh-----ccCCEEEE
Q 024121 9 ESFILGFIG-AGKMAESIAKGVAK-SGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDN----NAVV-----EYSDVVVF 77 (272)
Q Consensus 9 ~~~~IgiIG-~G~mG~~la~~l~~-~g~~~~~~V~v~~~r~~~~~~~l~~~g~~~~~~~----~~~~-----~~aDivil 77 (272)
...+|.|+| +|.+|...++.+.. .|. +|++. ++++++.+.+++.|+...-+. .+.+ ...|+||-
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~----~Vi~~-~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid 245 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDL----TVIAT-ASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFS 245 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCS----EEEEE-CSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCC----EEEEE-eCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEE
Confidence 456799998 89999987776655 477 99999 999999988888886432221 1111 25788888
Q ss_pred eeCcc-cHHHHHHHhchhcCCCCEEEEE
Q 024121 78 SVKPQ-VVKDVAMQIRPLLSRKKLLVSV 104 (272)
Q Consensus 78 ~v~~~-~~~~v~~~l~~~l~~~~~iis~ 104 (272)
|+... .+...++ .++++..++.+
T Consensus 246 ~~g~~~~~~~~~~----~l~~~G~iv~~ 269 (363)
T 4dvj_A 246 TTHTDKHAAEIAD----LIAPQGRFCLI 269 (363)
T ss_dssp CSCHHHHHHHHHH----HSCTTCEEEEC
T ss_pred CCCchhhHHHHHH----HhcCCCEEEEE
Confidence 87643 3444443 34556666654
Done!